Query 029264
Match_columns 196
No_of_seqs 154 out of 1331
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 10:06:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029264.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029264hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03392 PAP2_like_2 PAP2_like_ 100.0 4.5E-31 9.7E-36 199.4 20.6 167 15-186 7-181 (182)
2 cd03395 PAP2_like_4 PAP2_like_ 100.0 1.5E-30 3.2E-35 195.7 20.4 166 17-186 2-176 (177)
3 cd03389 PAP2_lipid_A_1_phospha 100.0 2.1E-28 4.6E-33 185.1 18.7 159 19-183 4-185 (186)
4 PRK11837 undecaprenyl pyrophos 100.0 9.9E-28 2.2E-32 183.1 20.6 161 17-183 2-171 (202)
5 cd03388 PAP2_SPPase1 PAP2_like 100.0 3.9E-28 8.4E-33 178.0 17.6 142 37-179 3-149 (151)
6 cd03391 PAP2_containing_2_like 100.0 6.9E-28 1.5E-32 177.8 17.5 142 37-180 13-158 (159)
7 cd03385 PAP2_BcrC_like PAP2_li 100.0 2.9E-27 6.4E-32 172.1 16.5 138 38-181 2-143 (144)
8 cd03396 PAP2_like_6 PAP2_like_ 99.9 1.9E-25 4.2E-30 170.5 17.0 166 18-183 2-196 (197)
9 PRK09597 lipid A 1-phosphatase 99.9 3.4E-25 7.4E-30 164.6 16.2 135 37-184 54-188 (190)
10 cd03382 PAP2_dolichyldiphospha 99.9 4.7E-25 1E-29 162.8 15.8 113 64-180 38-158 (159)
11 cd03393 PAP2_like_3 PAP2_like_ 99.9 4E-25 8.6E-30 157.2 14.7 112 66-180 11-124 (125)
12 cd03383 PAP2_diacylglycerolkin 99.9 3.5E-25 7.5E-30 152.7 13.3 97 72-183 12-108 (109)
13 PRK10699 phosphatidylglyceroph 99.9 1.2E-24 2.7E-29 168.8 16.4 147 39-186 39-232 (244)
14 cd03394 PAP2_like_5 PAP2_like_ 99.9 4.4E-25 9.6E-30 152.5 11.8 104 67-180 2-105 (106)
15 PLN02525 phosphatidic acid pho 99.9 2.6E-23 5.5E-28 169.8 17.4 145 40-185 8-165 (352)
16 cd03390 PAP2_containing_1_like 99.9 5.8E-24 1.2E-28 161.9 12.5 114 70-183 48-192 (193)
17 cd03381 PAP2_glucose_6_phospha 99.9 6.3E-23 1.4E-27 159.0 15.7 118 66-183 13-153 (235)
18 cd03384 PAP2_wunen PAP2, wunen 99.9 6.8E-23 1.5E-27 149.9 12.3 111 70-180 6-149 (150)
19 PLN02250 lipid phosphate phosp 99.9 1.4E-21 3.1E-26 157.2 16.8 115 70-184 100-244 (314)
20 PLN02715 lipid phosphate phosp 99.9 2.5E-21 5.5E-26 156.2 17.1 115 70-184 125-268 (327)
21 KOG4268 Uncharacterized conser 99.9 2.1E-21 4.5E-26 137.6 13.2 169 14-187 10-183 (189)
22 smart00014 acidPPc Acid phosph 99.9 2.1E-21 4.6E-26 136.2 12.8 104 76-179 3-114 (116)
23 PLN02731 Putative lipid phosph 99.9 3.2E-21 6.9E-26 155.7 15.2 116 70-185 119-263 (333)
24 PF01569 PAP2: PAP2 superfamil 99.8 2.9E-21 6.3E-26 137.5 6.2 118 71-188 3-128 (129)
25 cd01610 PAP2_like PAP2_like pr 99.8 1.7E-19 3.7E-24 126.6 13.6 107 74-180 9-121 (122)
26 cd03380 PAP2_like_1 PAP2_like_ 99.8 6.2E-19 1.3E-23 135.9 13.8 107 68-179 93-206 (209)
27 cd03397 PAP2_acid_phosphatase 99.8 3.7E-18 8E-23 133.2 17.9 159 14-181 49-215 (232)
28 COG0671 PgpB Membrane-associat 99.8 3.5E-18 7.6E-23 131.5 16.7 117 69-187 92-214 (232)
29 KOG3030 Lipid phosphate phosph 99.7 3.9E-17 8.4E-22 131.4 13.2 117 68-184 110-261 (317)
30 KOG2822 Sphingoid base-phospha 99.7 9.6E-17 2.1E-21 128.9 13.0 152 31-184 76-236 (407)
31 cd03398 PAP2_haloperoxidase PA 99.7 6.4E-17 1.4E-21 126.5 10.2 113 68-180 86-230 (232)
32 cd03386 PAP2_Aur1_like PAP2_li 99.7 1.7E-14 3.7E-19 109.2 18.2 70 108-181 114-183 (186)
33 KOG3146 Dolichyl pyrophosphate 99.6 4.7E-14 1E-18 105.1 17.2 117 64-183 51-175 (228)
34 COG3907 PAP2 (acid phosphatase 99.4 4.2E-11 9.1E-16 88.8 14.8 172 16-187 44-240 (249)
35 PF14378 PAP2_3: PAP2 superfam 99.2 1.1E-09 2.3E-14 83.3 15.4 65 111-178 126-190 (191)
36 COG1963 Uncharacterized protei 97.8 0.00053 1.1E-08 48.7 10.0 102 76-184 15-151 (153)
37 PF14360 PAP2_C: PAP2 superfam 97.4 0.0012 2.5E-08 42.3 7.3 64 113-177 6-69 (74)
38 PF02681 DUF212: Divergent PAP 97.4 0.0021 4.6E-08 46.1 8.8 96 75-177 8-141 (141)
39 KOG3058 Uncharacterized conser 83.8 2.2 4.8E-05 35.3 4.7 65 112-177 210-274 (351)
40 PF12270 Cyt_c_ox_IV: Cytochro 78.9 21 0.00046 25.6 12.2 50 71-120 39-90 (137)
41 PF10261 Scs3p: Inositol phosp 69.4 20 0.00044 28.1 6.3 34 145-180 204-237 (238)
42 PF02656 DUF202: Domain of unk 63.7 33 0.00071 21.3 6.5 50 139-188 13-69 (73)
43 PF09512 ThiW: Thiamine-precur 54.3 82 0.0018 22.9 6.8 64 110-186 25-88 (150)
44 PF10754 DUF2569: Protein of u 52.1 87 0.0019 22.5 9.1 37 159-195 112-149 (149)
45 COG5336 Uncharacterized protei 48.3 24 0.00053 24.2 2.9 19 162-180 73-91 (116)
46 PF13373 DUF2407_C: DUF2407 C- 48.2 26 0.00056 25.2 3.3 26 159-184 85-110 (140)
47 PF10389 CoatB: Bacteriophage 48.1 38 0.00082 19.4 3.3 21 166-186 24-44 (46)
48 PF06738 DUF1212: Protein of u 41.3 1.3E+02 0.0029 22.3 6.5 20 161-180 152-171 (193)
49 PF07694 5TM-5TMR_LYT: 5TMR of 40.6 1.2E+02 0.0026 21.8 6.0 40 143-182 62-102 (169)
50 PRK14759 potassium-transportin 35.5 67 0.0014 16.4 3.0 23 166-188 6-28 (29)
51 PRK02983 lysS lysyl-tRNA synth 33.1 4.9E+02 0.011 25.6 13.4 29 64-92 71-99 (1094)
52 PF06946 Phage_holin_5: Phage 32.4 1.5E+02 0.0033 19.7 7.3 50 137-186 33-84 (93)
53 PF03073 TspO_MBR: TspO/MBR fa 32.3 1.9E+02 0.0041 20.6 7.7 69 108-176 36-109 (148)
54 PF14362 DUF4407: Domain of un 26.5 3E+02 0.0065 22.2 6.7 7 113-119 8-14 (301)
55 PF09604 Potass_KdpF: F subuni 26.2 95 0.0021 15.3 2.7 23 166-188 2-24 (25)
56 PF12732 YtxH: YtxH-like prote 25.9 95 0.002 19.3 2.9 18 163-180 2-19 (74)
57 PF15179 Myc_target_1: Myc tar 23.9 1.9E+02 0.0042 21.8 4.5 36 112-157 15-50 (197)
58 PF04147 Nop14: Nop14-like fam 23.8 1.9E+02 0.0042 27.3 5.6 86 82-179 513-598 (840)
59 KOG1519 Predicted mitochondria 22.8 51 0.0011 25.3 1.4 23 160-182 209-231 (297)
60 PF03672 UPF0154: Uncharacteri 22.4 1.7E+02 0.0036 18.1 3.3 10 168-177 9-18 (64)
61 PF10947 DUF2628: Protein of u 22.0 2.5E+02 0.0055 18.7 8.4 30 157-186 75-104 (108)
62 PF14068 YuiB: Putative membra 21.8 1.5E+02 0.0032 20.0 3.3 24 167-190 77-100 (102)
63 PF04892 VanZ: VanZ like famil 21.7 2.7E+02 0.0059 19.0 9.5 42 145-187 86-129 (133)
64 PRK14740 kdbF potassium-transp 21.6 1.3E+02 0.0029 15.3 3.1 25 164-188 4-28 (29)
65 PF06799 DUF1230: Protein of u 21.0 1.1E+02 0.0024 22.1 2.7 24 146-169 73-96 (144)
No 1
>cd03392 PAP2_like_2 PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=100.00 E-value=4.5e-31 Score=199.41 Aligned_cols=167 Identities=24% Similarity=0.300 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCchHHHHHHHHHhCCchhHHHHHHHHHH--H-hcchHHHHHHHHHHHHHHHHHHHHhhhh
Q 029264 15 HRIITLDAAVSKSIHTLFHTSIPGSLLLLLEYSADFRFSFPLALSLYF--T-RVRRPYLIQFLVGLLVDLLFVGLVKSIF 91 (196)
Q Consensus 15 ~~l~~~D~~i~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~i~~~lK~~~ 91 (196)
+.+..+|..+..++|+.+++. .|.++..++.+|+....+++.+++.. + +++++....+..++..+..++..+|..+
T Consensus 7 ~~~~~~D~~i~~~~~~~~~~~-~~~~~~~it~lg~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~ 85 (182)
T cd03392 7 GWLTAFDQSVLSLLRSLRTPL-LTAFMTAITFLGSPAVLLIIVLLLALLLLLKRRRRAALFLLLALLGGGALNTLLKLLV 85 (182)
T ss_pred chHhhHHHHHHHHHHhcCChH-HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 568899999999999988877 78999999999998877665554322 2 4445556666677778888899999999
Q ss_pred cCCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhh-h----hHHHHHHHHHHHHHHHHhhhhcCccChhHh
Q 029264 92 RRSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFS-G----NCWLVLGVWTWAVLTSCSRVLLGRHFVSDV 166 (196)
Q Consensus 92 ~r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~v~~sRvylg~H~~sDv 166 (196)
+|+||...+.. +++++||||||++.++++++++.....+. . +.+...+.++++..+++||+|+|+|||||+
T Consensus 86 ~r~RP~~~~~~----~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRv~lg~H~~sDv 161 (182)
T cd03392 86 QRPRPPLHLLV----PEGGYSFPSGHAMGATVLYGFLAYLLARRLPRRRVRILLLILAAILILLVGLSRLYLGVHYPSDV 161 (182)
T ss_pred cCCCCCCcccC----CCCCCCCCcHHHHHHHHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHH
Confidence 99999865422 46789999999999988877654433221 1 334455667889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 029264 167 LAGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 167 l~G~~lG~~~~~l~~~~~~~ 186 (196)
++|+++|..+..+....+++
T Consensus 162 l~G~~lG~~~~~~~~~~~~~ 181 (182)
T cd03392 162 LAGWLLGLAWLALLILLYRR 181 (182)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999887765
No 2
>cd03395 PAP2_like_4 PAP2_like_4 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.98 E-value=1.5e-30 Score=195.72 Aligned_cols=166 Identities=25% Similarity=0.303 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHhc-cCCchHHHHHHHHHhCCchhHHHHHHHHHHHhcch-HH--H-HHHHHHHHHHHHHHHHHhhhh
Q 029264 17 IITLDAAVSKSIHTLF-HTSIPGSLLLLLEYSADFRFSFPLALSLYFTRVRR-PY--L-IQFLVGLLVDLLFVGLVKSIF 91 (196)
Q Consensus 17 l~~~D~~i~~~~~~~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~-~~--~-~~~~~~~~~~~~i~~~lK~~~ 91 (196)
+..+|..+..++|+.+ ++. .+.++..++.+|+...++.+.+..++.++++ .. . .........+.+++..+|..+
T Consensus 2 ~~~~D~~l~~~i~~~~~~~~-l~~~~~~it~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~ 80 (177)
T cd03395 2 LEQIDVWLFLLLNGTLVHPL-LDDLMPFLTGKKLSVPIFLLLALFILFRKGPIGLLILLLVLLAVGFADQLASGFLKPLV 80 (177)
T ss_pred hHHHHHHHHHHHhcCCCChh-HHHHHHHHHCchhHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999999875 554 7899999999998765432222222233222 21 1 112223344567788999999
Q ss_pred cCCCCCCCCCCC----cCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhH
Q 029264 92 RRSRPLYNPDMK----PAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVL 167 (196)
Q Consensus 92 ~r~RP~~~~~~~----~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl 167 (196)
+||||...++.. ...+.+++||||||++.+++++..+.+..++ +.......+++.++++||+|+|+||||||+
T Consensus 81 ~r~RP~~~~~~~~~~~~~~~~~~~SFPSgHt~~a~~~~~~l~~~~~~---~~~~~~~~~~~~~v~~SRvylG~H~psDVl 157 (177)
T cd03395 81 ARLRPCNALDGVRLVVLGDQGGSYSFASSHAANSFALALFIWLFFRR---GLFSPVLLLWALLVGYSRVYVGVHYPGDVI 157 (177)
T ss_pred CCCCCCCCccccccccccCCCCCCCCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhCCcCHHHHH
Confidence 999999763322 1235678999999999999988887655442 234456678889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 029264 168 AGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 168 ~G~~lG~~~~~l~~~~~~~ 186 (196)
+|+++|..++.+...++|.
T Consensus 158 ~G~~lG~~~~~~~~~~~~~ 176 (177)
T cd03395 158 AGALIGIISGLLFYLLFSW 176 (177)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999998887753
No 3
>cd03389 PAP2_lipid_A_1_phosphatase PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.
Probab=99.96 E-value=2.1e-28 Score=185.09 Aligned_cols=159 Identities=25% Similarity=0.274 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHhCCchhHHHHHHHHHHH---hc------------c--hHHHHHHHHHHHHHH
Q 029264 19 TLDAAVSKSIHTLFHTSIPGSLLLLLEYSADFRFSFPLALSLYFT---RV------------R--RPYLIQFLVGLLVDL 81 (196)
Q Consensus 19 ~~D~~i~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~---~~------------~--~~~~~~~~~~~~~~~ 81 (196)
.+|+.+.+++++.+++. .+.++..++.+|++..+.++.++++++ ++ + ++....+..+++.+.
T Consensus 4 ~~D~~~~~~~~~~~~~~-l~~~~~~it~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 82 (186)
T cd03389 4 YLDRPLALYIKALDGRI-LAGFFRTITDFGKSGWYLIPSLLLFLLFRFGDLRGLSAPSRARFPKAAWAGLFLFATVALSG 82 (186)
T ss_pred eccHHHHHHHHHCCchh-HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999988776 788999999999986555443333222 21 1 234455566667777
Q ss_pred HHHHHHhhhhcCCCCCCCCCC-----Cc-CCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhh
Q 029264 82 LFVGLVKSIFRRSRPLYNPDM-----KP-AVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSR 155 (196)
Q Consensus 82 ~i~~~lK~~~~r~RP~~~~~~-----~~-~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sR 155 (196)
+++..+|..++||||....+. .+ ....+++||||||++.+++.++++....++. ......++.++++||
T Consensus 83 ~i~~~lK~~~~R~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~~~~~~l~~~~~~~-----~~~~~~~~~lv~~SR 157 (186)
T cd03389 83 ILVNLLKFIIGRARPKLLFDDGLYGFDPFHADYAFTSFPSGHSATAGAAAAALALLFPRY-----RWAFILLALLIAFSR 157 (186)
T ss_pred HHHHHHHHHHCCCCCChhhcCCcccccccccCCCCCCcCcHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
Confidence 889999999999999854211 11 1135578999999999998888877655432 234466788999999
Q ss_pred hhcCccChhHhHHHHHHHHHHHHHHHHH
Q 029264 156 VLLGRHFVSDVLAGACLGVLEAAFVFRF 183 (196)
Q Consensus 156 vylg~H~~sDvl~G~~lG~~~~~l~~~~ 183 (196)
+|+|+||||||++|+++|..++.+.++.
T Consensus 158 iylg~H~~sDVl~G~~lG~~~~~~~~~~ 185 (186)
T cd03389 158 VIVGAHYPSDVIAGSLLGAVTALALYQR 185 (186)
T ss_pred HHcCCcCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999887764
No 4
>PRK11837 undecaprenyl pyrophosphate phosphatase; Provisional
Probab=99.96 E-value=9.9e-28 Score=183.07 Aligned_cols=161 Identities=21% Similarity=0.285 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHhccCC-chHHHHHHHHHhCCchhHHHHHHHHHHH-h------cchHHHHHHHHHHHHHHHHHHHHh
Q 029264 17 IITLDAAVSKSIHTLFHTS-IPGSLLLLLEYSADFRFSFPLALSLYFT-R------VRRPYLIQFLVGLLVDLLFVGLVK 88 (196)
Q Consensus 17 l~~~D~~i~~~~~~~~~~~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~i~~~lK 88 (196)
++++|.++..++|+..... ..+.++..++. +....+++.++++++ . ++|+.......+++++.+++..+|
T Consensus 2 ~~~~d~~lf~~in~~~~~~~~l~~~~~~i~~--~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk 79 (202)
T PRK11837 2 LENLNLSLFSLINATPDSAPWMISLAIFIAK--DLILIVPLLAVVLWLWGPRDQLTAQRQLVIKIAIALAISLLVSWTIG 79 (202)
T ss_pred hHHHHHHHHHHHHcCCCCChHHHHHHHHHHH--HHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999999865543 45555555544 222222223332222 2 123455556667777888899999
Q ss_pred hhhcCCCCCCC-CCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhH
Q 029264 89 SIFRRSRPLYN-PDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVL 167 (196)
Q Consensus 89 ~~~~r~RP~~~-~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl 167 (196)
..++|+||... .+.....+++++||||||++.+++++..+.+.. +++.......+++++++||+|+|+||||||+
T Consensus 80 ~~~~r~RP~~~~~~~~~~~~~~~~SFPSgHa~~~~~~a~~~l~~~----~~~~~~~~~~~a~lva~SRVylGvHypsDVl 155 (202)
T PRK11837 80 HLFPHDRPFVEGIGYNFLHHAADDSFPSDHGTVIFTFALAFLFWH----RLWSGSLLMAIAVAIAWSRVYLGVHWPLDML 155 (202)
T ss_pred HHhcCCCCCCCccccccccCCCCCCCchHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCccHHHHH
Confidence 99999999854 222234457789999999998887655433322 2234456678889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 029264 168 AGACLGVLEAAFVFRF 183 (196)
Q Consensus 168 ~G~~lG~~~~~l~~~~ 183 (196)
+|+++|.+++.+....
T Consensus 156 gG~~lG~~~~~~~~~~ 171 (202)
T PRK11837 156 GALLVGMIGCLSAQII 171 (202)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999877643
No 5
>cd03388 PAP2_SPPase1 PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second messenger in the cell, and extracellularly by binding to G-protein coupled receptors of the endothelial differentiation gene family.
Probab=99.96 E-value=3.9e-28 Score=178.00 Aligned_cols=142 Identities=20% Similarity=0.259 Sum_probs=103.1
Q ss_pred hHHHHHHHHHhCCchhHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCcCC--CCCCCCCC
Q 029264 37 PGSLLLLLEYSADFRFSFPLALSLYFTRVRRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKPAV--SVDHFSFP 114 (196)
Q Consensus 37 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~~~--~~~~~sfP 114 (196)
.|.++..++.+|+..+++.+ +.++.+.++++....+..+.+.+..++..+|..++||||...+...... +.+++|||
T Consensus 3 ld~~~~~it~lg~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~SFP 81 (151)
T cd03388 3 LDYYFAFTALLGTHTFYILF-LPFLFWNGDPYVGRDLVVVLALGMYIGQFIKDLFCLPRPSSPPVVRLTMSSAALEYGFP 81 (151)
T ss_pred HHHHHHHHHHhcchHHHHHH-HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCCchhhhhccccCCCCCCC
Confidence 57899999999997654333 3333333334344455556667778888999999999999643222111 46789999
Q ss_pred chhHHHHHHHHHHHHHhhhhhh---hHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHH
Q 029264 115 SGHASRVFFVASFISLLDDFSG---NCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAF 179 (196)
Q Consensus 115 SgHa~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l 179 (196)
|||++.+++++..+....++.. +........++++++++||+|+|+|||+||++|+++|..++..
T Consensus 82 SgH~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~SRvylgvH~p~DVl~G~~lG~~~~~~ 149 (151)
T cd03388 82 STHAMNATAISFYLLIYLYDRYQYPFVLGLILALFYSTLVCLSRIYMGMHSVLDVIAGSLIGVLILLF 149 (151)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999988887665433221 1223455677889999999999999999999999999988754
No 6
>cd03391 PAP2_containing_2_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_2. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to eukaryota, lacks functional characterization and may act as a membrane-associated phosphatidic acid phosphatase.
Probab=99.96 E-value=6.9e-28 Score=177.77 Aligned_cols=142 Identities=44% Similarity=0.619 Sum_probs=109.0
Q ss_pred hHHHHHHHHHhCCchhHHHHHHHHHHHh-c--chHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCC-CCCCcCCCCCCCC
Q 029264 37 PGSLLLLLEYSADFRFSFPLALSLYFTR-V--RRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYN-PDMKPAVSVDHFS 112 (196)
Q Consensus 37 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~-~~~~~~~~~~~~s 112 (196)
.+.+++.++.+|++.+++++.+++++.. + .++....+..+.+.+.+++.++|..++|+||... ++.......+++|
T Consensus 13 ~~~~~~~~t~lg~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~S 92 (159)
T cd03391 13 VRPLVKLLELSGHGIPWLAGTISCLWISSSPAGQEVLVNLLLGLLLDIITVAILKALVRRRRPAYNSPDMLDYVAVDKYS 92 (159)
T ss_pred hHHHHHHHHHhcCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCccchhccCCCCC
Confidence 5789999999999988777766655542 1 2234455667777777888999999999999865 2222233456789
Q ss_pred CCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 113 FPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 113 fPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
|||||++.++++++++....+. +.........++.++++||+|+|+|||+||++|+++|.+++.++
T Consensus 93 FPSGHa~~a~a~a~~l~~~~~~--~~~~~~~~~~~a~~v~~SRvylg~H~psDVlaG~~lG~~~~~~~ 158 (159)
T cd03391 93 FPSGHASRAAFVARFLLNHLVL--AVPLRVLLVLWATVVGISRVLLGRHHVLDVLAGAFLGYLEALLV 158 (159)
T ss_pred CCchhHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHHHHhC
Confidence 9999999999888877655432 12344566788999999999999999999999999999988653
No 7
>cd03385 PAP2_BcrC_like PAP2_like proteins, BcrC_like subfamily. Several members of this family have been annotated as bacitracin transport permeases, as it was suspected that they form the permease component of an ABC transporter system. It was shown, however, that BcrC from Bacillus subtilis posesses undecaprenyl pyrophosphate (UPP) phospatase activity, and it is hypothesized that it competes with bacitracin for UPP, increasing the cell's resistance to bacitracin.
Probab=99.95 E-value=2.9e-27 Score=172.09 Aligned_cols=138 Identities=25% Similarity=0.345 Sum_probs=97.6
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHHH---hcchHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCC-CcCCCCCCCCC
Q 029264 38 GSLLLLLEYSADFRFSFPLALSLYFT---RVRRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDM-KPAVSVDHFSF 113 (196)
Q Consensus 38 ~~~~~~~~~lg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~-~~~~~~~~~sf 113 (196)
|.++..++..+.. ..++.+..+++ ++.|+.......+...+..++..+|..++||||...+.. ....++.++||
T Consensus 2 d~~~~~~t~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lk~~~~r~RP~~~~~~~~~~~~~~~~SF 79 (144)
T cd03385 2 DALAIFIAEYLIY--ILPLLLVVLWLWGGEKQRKVVLFATIAVAVALLINYIIGLLYFHPRPFVVGLGHNLLPHAADSSF 79 (144)
T ss_pred HHHHHHHHhhHHH--HHHHHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccccccCCCCCCC
Confidence 4566666665321 12333333332 223445555667777788889999999999999855322 22345668999
Q ss_pred CchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHH
Q 029264 114 PSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVF 181 (196)
Q Consensus 114 PSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~ 181 (196)
||||++.+++++..++... +++.......+++++++||+|+|+|||+||++|+++|..++.+.+
T Consensus 80 PSgH~~~~~~~~~~l~~~~----~~~~~~~~~~~a~~v~~SRvylg~H~~sDVl~G~~lg~~~~~~~~ 143 (144)
T cd03385 80 PSDHTTLFFSIAFSLLLRR----RKWAGWILLILALLVAWSRIYLGVHYPLDMLGAALVAVLSALLVF 143 (144)
T ss_pred CcHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHHHHHh
Confidence 9999999987776554322 223455677899999999999999999999999999999998765
No 8
>cd03396 PAP2_like_6 PAP2_like_6 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which mainly contains bacterial proteins, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.94 E-value=1.9e-25 Score=170.52 Aligned_cols=166 Identities=26% Similarity=0.242 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHhccCCc-----hHHHHHHHHHhCCchhHHHH--HHHHHH-H--h-----cchHHHHHHHHHHHHHHH
Q 029264 18 ITLDAAVSKSIHTLFHTSI-----PGSLLLLLEYSADFRFSFPL--ALSLYF-T--R-----VRRPYLIQFLVGLLVDLL 82 (196)
Q Consensus 18 ~~~D~~i~~~~~~~~~~~~-----~~~~~~~~~~lg~~~~~~~~--~~~~~~-~--~-----~~~~~~~~~~~~~~~~~~ 82 (196)
.++|..+.+++.+.+...+ .+.+...+...+........ ...+.+ . + ++++....+..+++.+.+
T Consensus 2 ~~lD~~~a~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
T cd03396 2 PGLDLWVAGLFYDAGGGVFPFPLRHSWILETLLHLGGRLLSIALAVLLLALALLFFRRKRLRRRRRALLLLILVIGLGLL 81 (197)
T ss_pred ChhhHHHHHHHhcccCCCCCchhhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3689999999998765432 22333333332222221211 111111 1 1 122345667777778888
Q ss_pred HHHHHhhhhcCCCCCCCCCC------------CcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhh--hHHHHHHHHHHH
Q 029264 83 FVGLVKSIFRRSRPLYNPDM------------KPAVSVDHFSFPSGHASRVFFVASFISLLDDFSG--NCWLVLGVWTWA 148 (196)
Q Consensus 83 i~~~lK~~~~r~RP~~~~~~------------~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 148 (196)
++.++|..++|+||....+. ....+.+++||||||++.++++..+.++..+++. ++......+.++
T Consensus 82 v~~~lK~~~~r~RP~~~~~~gg~~~~~~~~~~~~~~~~~~~SFPSGHas~af~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (197)
T cd03396 82 VVAILKSHWGRPRPWDLTEFGGDAPYTPLFSGPSNGCGKGCSFPSGHASAGFALLALYFLFRRRRPRLARLVLAAGLALG 161 (197)
T ss_pred HHHHHHhhcCCCChhhHHHhCCCCCCCcccccCCCCCCCCCcCCchhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 89999999999999865211 1123566789999999999887665544443332 233445567788
Q ss_pred HHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHH
Q 029264 149 VLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRF 183 (196)
Q Consensus 149 ~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~ 183 (196)
.++|+||+|.|.||+|||++|+++|++++.+.+++
T Consensus 162 ~~vg~sRi~~G~Hf~SDvl~g~~ig~~~~~~~~~~ 196 (197)
T cd03396 162 ALMGLARMARGAHFLSDVLWSLLLVWLIALLLYRL 196 (197)
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988764
No 9
>PRK09597 lipid A 1-phosphatase; Reviewed
Probab=99.94 E-value=3.4e-25 Score=164.56 Aligned_cols=135 Identities=17% Similarity=0.101 Sum_probs=97.7
Q ss_pred hHHHHHHHHHhCCchhHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCcCCCCCCCCCCch
Q 029264 37 PGSLLLLLEYSADFRFSFPLALSLYFTRVRRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKPAVSVDHFSFPSG 116 (196)
Q Consensus 37 ~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~~~~~~~~sfPSg 116 (196)
.+..++.++.+|+.. ..+.+++++....+..+++.+.+++..+|..++|+||....... .....++|||||
T Consensus 54 l~~~~r~it~lg~~~--------~~l~~~d~~g~~~l~~al~~~~ll~~~LK~~~~R~~~~~~r~~~-~p~~~~~SFPSG 124 (190)
T PRK09597 54 TEHYARFIPTILSVA--------IPLIQRDAIGLFQVANASIATTLLTHTTKRALNHVTINDQRLGE-RPYGGNFNMPSG 124 (190)
T ss_pred HHHHHHHHHHHHHHH--------HHHHhccHhHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-CCCCCCCCCCcH
Confidence 566777777776643 23335666777888889999999999999999998876441111 123345999999
Q ss_pred hHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHH
Q 029264 117 HASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFL 184 (196)
Q Consensus 117 Ha~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~ 184 (196)
||+.+++.+.++....+ .+.. +..+.++++++.||+|+|+|||+||++|+++|.+++.+.....
T Consensus 125 Ht~~af~~a~~l~~~~~---~~~~-~~~l~lallVg~SRVYLGvHyPsDVLaG~liGil~~~lf~~~~ 188 (190)
T PRK09597 125 HSSMVGLAVAFLMRRYS---FKKY-WWLLPLIPLTMLARIYLDMHTIGAVLAGLGVGMLCVSLFTSPK 188 (190)
T ss_pred HHHHHHHHHHHHHHHHc---hhHH-HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999876655442211 1111 2234566789999999999999999999999999998876644
No 10
>cd03382 PAP2_dolichyldiphosphatase PAP2_like proteins, dolichyldiphosphatase subfamily. Dolichyldiphosphatase is a membrane-associated protein located in the endoplasmic reticulum and hydrolyzes dolichyl pyrophosphate, as well as dolichylmonophosphate at a low rate. The enzyme is necessary for maintaining proper levels of dolichol-linked oligosaccharides and protein N-glycosylation, and might play a role in re-utilization of the glycosyl carrier lipid for additional rounds of lipid intermediate biosynthesis after its release during protein N-glycosylation reactions.
Probab=99.93 E-value=4.7e-25 Score=162.81 Aligned_cols=113 Identities=30% Similarity=0.421 Sum_probs=83.9
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHh--hhhh------
Q 029264 64 RVRRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLL--DDFS------ 135 (196)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~--~~~~------ 135 (196)
++++........+.+.+..++..+|..++||||..... .+++++||||||++.+++.+.++.+. .+.+
T Consensus 38 ~~r~~~~~~~~~~~~~~~~~~~~lK~~~~rpRP~~~~~----~~~~~~SFPSgHa~~~~~~~~~~~l~~~~~~~~~~~~~ 113 (159)
T cd03382 38 FRRELEAIYLFIGLLANEALNYVLKRIIKEPRPCSGAY----FVRSGYGMPSSHSQFMGFFAVYLLLFIYLRLGRLNSLV 113 (159)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCc----CCCCCCCCCchhHHHHHHHHHHHHHHHHHHcccchhHH
Confidence 44444455666677778888999999999999986532 15678999999999876555443322 1111
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 136 GNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 136 ~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
.+.......+++++++++||+|+|+|||+||++|+++|..++.++
T Consensus 114 ~~~~~~~~~~~~~~~v~~SRvylg~H~~~DVl~G~~lG~~~~~~~ 158 (159)
T cd03382 114 SRFLLSLGLLLLALLVSYSRVYLGYHTVSQVVVGAIVGILLGILW 158 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhc
Confidence 122344556788899999999999999999999999999988764
No 11
>cd03393 PAP2_like_3 PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.93 E-value=4e-25 Score=157.16 Aligned_cols=112 Identities=26% Similarity=0.339 Sum_probs=87.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCC--cCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 029264 66 RRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMK--PAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLG 143 (196)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~--~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~ 143 (196)
+++....+..+.+++..++..+|..++||||...++.. ...+++++||||||++.++++++.+....+ +++....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~sFPSgHa~~~~~~~~~~~~~~~---~~~~~~~ 87 (125)
T cd03393 11 DKRLGRYLGLALCASGYLNAALKEVFKIPRPFTYDGIQAIYEESAGGYGFPSGHAQTSATFWGSLMLHVR---KKWFTLI 87 (125)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCcccchhccCCCCCCCCCcHHHHHHHHHHHHHHHHHH---HHHHHHH
Confidence 44556667778888889999999999999998764332 123567899999999998877666544333 3344555
Q ss_pred HHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 144 VWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 144 ~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
...++.++++||+|+|+|||+||++|+++|..++++.
T Consensus 88 ~~~~~~~v~~sRv~lg~H~~sDVl~G~~lG~~~~~~~ 124 (125)
T cd03393 88 GVVLVVLISFSRLYLGVHWPSDVIGGVLIGLLVLVLG 124 (125)
T ss_pred HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHh
Confidence 6677889999999999999999999999999998764
No 12
>cd03383 PAP2_diacylglycerolkinase PAP2_like proteins, diacylglycerol_kinase like sub-family. In some prokaryotes, PAP2_like phosphatase domains appear fused to E. coli DAGK-like trans-membrane diacylglycerol kinase domains. The cellular function of these architectures remains to be determined.
Probab=99.93 E-value=3.5e-25 Score=152.71 Aligned_cols=97 Identities=34% Similarity=0.490 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q 029264 72 QFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLT 151 (196)
Q Consensus 72 ~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 151 (196)
....+.+++.+++..+|..++|+||.. .||||||++.+++++.++.+..+ +++......+++.++
T Consensus 12 ~~~~~~~~~~~i~~~lK~~~~r~RP~~------------~sFPSgHt~~a~a~a~~l~~~~~---~~~~~~~~~~~a~lv 76 (109)
T cd03383 12 VTFVSLLIVIIVVVILKAYFGRGTPLE------------GGMPSGHAAIAFSIATAISLITN---NPIISILSVLLAVMV 76 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCC------------CCCChHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHH
Confidence 344666777888999999999999973 48999999999988887665433 334556677889999
Q ss_pred HHhhhhcCccChhHhHHHHHHHHHHHHHHHHH
Q 029264 152 SCSRVLLGRHFVSDVLAGACLGVLEAAFVFRF 183 (196)
Q Consensus 152 ~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~ 183 (196)
++||+|+|+|||+||++|+++|..++.+.+++
T Consensus 77 ~~SRvylg~H~psDVlaG~~lG~~~~~~~~~~ 108 (109)
T cd03383 77 AHSRVEMKIHTMWEVVVGAILGALITLLIFKI 108 (109)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887764
No 13
>PRK10699 phosphatidylglycerophosphatase B; Provisional
Probab=99.93 E-value=1.2e-24 Score=168.78 Aligned_cols=147 Identities=20% Similarity=0.188 Sum_probs=99.3
Q ss_pred HHHHHHHHhCCchhHHHHHHHHHHH-----hcchH----HHHHHHHHHHHHHHHHHHHhhhhcCCCCC------CC---C
Q 029264 39 SLLLLLEYSADFRFSFPLALSLYFT-----RVRRP----YLIQFLVGLLVDLLFVGLVKSIFRRSRPL------YN---P 100 (196)
Q Consensus 39 ~~~~~~~~lg~~~~~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~i~~~lK~~~~r~RP~------~~---~ 100 (196)
..+.++|+.+..+..++.++++..+ +.+++ ....+.++++++..++.++|..++||||. .. +
T Consensus 39 ~~~~~lT~t~~~p~~~iT~~~l~~~~~~~~r~~~k~~l~l~~~l~~~i~~~~~~k~~iK~~~~epRP~v~~l~~~~~~~~ 118 (244)
T PRK10699 39 KGLFWVTETVTQPWGILTHVLLCGWFLWCLRFRLKAALVLFAILAAAILVGQGVKSWIKERVQEPRPFVVWLEKTHHIPV 118 (244)
T ss_pred hhHhheecCCCCchHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHhcCCCH
Confidence 3456677777665555544443221 22222 22344556677888899999999999995 11 0
Q ss_pred C-----------------C-----------CcCCCCCCCCCCchhHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHH
Q 029264 101 D-----------------M-----------KPAVSVDHFSFPSGHASRVFFVASFIS-LLDDFSGNCWLVLGVWTWAVLT 151 (196)
Q Consensus 101 ~-----------------~-----------~~~~~~~~~sfPSgHa~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v 151 (196)
+ . +...+++++||||||++++++++.+.. +..+++ +........+++.++
T Consensus 119 ~~FY~l~~~~r~~~v~~~~~~~~~~~~w~~~hw~~~~gySFPSGHa~~a~~~~l~~~~ll~~~~-~~~~~~~~~~wa~~v 197 (244)
T PRK10699 119 DEFYTLKRAERGELVKEQLAEQSNIPQWLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRR-RYKTVALLMLWATGV 197 (244)
T ss_pred HHHHccCHHHHHHHHHHHHhccccCCHHHHhccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 0 0 011366789999999999876544322 222222 233345567889999
Q ss_pred HHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHhh
Q 029264 152 SCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 152 ~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~~ 186 (196)
++||+|+|+|||+||++|.++|..++.+...+.++
T Consensus 198 ~~SRvyLGvH~psDVlaG~llG~~~~~l~~~l~~~ 232 (244)
T PRK10699 198 MGSRLLLGMHWPRDLVVATLISWLLVTVATWLAQR 232 (244)
T ss_pred HHHHHHccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888876654
No 14
>cd03394 PAP2_like_5 PAP2_like_5 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.
Probab=99.93 E-value=4.4e-25 Score=152.51 Aligned_cols=104 Identities=32% Similarity=0.434 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q 029264 67 RPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWT 146 (196)
Q Consensus 67 ~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (196)
|+....+..++.++..++..+|..++|+||.... .+++||||||++.++++++++....+ +++......+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~-------~~~~sfPSgHa~~a~~~~~~~~~~~~---~~~~~~~~~~ 71 (106)
T cd03394 2 REGLLILAEAAALTAAVTEGLKFAVGRARPDGSN-------NGYRSFPSGHTASAFAAATFLQYRYG---WRWYGIPAYA 71 (106)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-------CCCCccCcHHHHHHHHHHHHHHHHHc---chHHHHHHHH
Confidence 3456677788888889999999999999998543 56789999999999988877654433 2244555677
Q ss_pred HHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 147 WAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 147 ~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
++.++++||+|+|+|||+||++|.++|..++.+.
T Consensus 72 ~~~~v~~sRv~~g~H~~sDV~~G~~lG~~~~~~~ 105 (106)
T cd03394 72 LASLVGASRVVANRHWLSDVLAGAAIGILVGYLV 105 (106)
T ss_pred HHHHHHHHHHhcCCcCHHHHHHHHHHHHHheeee
Confidence 8889999999999999999999999999987653
No 15
>PLN02525 phosphatidic acid phosphatase family protein
Probab=99.91 E-value=2.6e-23 Score=169.80 Aligned_cols=145 Identities=15% Similarity=0.164 Sum_probs=101.8
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCc------CCCCCCCCC
Q 029264 40 LLLLLEYSADFRFSFPLALSLYFTRVRRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKP------AVSVDHFSF 113 (196)
Q Consensus 40 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~------~~~~~~~sf 113 (196)
++...+.++...+++.++.. +++.++++....+...++.+..+++.+|..++||||...+.... .....+|||
T Consensus 8 ~f~~~~~l~~~~Fyi~~Lp~-l~w~~~~~~~~~lv~ll~~~~~l~~~lKd~v~rPRP~~pp~~ri~~~~~~~~~a~eYsF 86 (352)
T PLN02525 8 FFSGLSCVVSVPFYTAFLPL-LFWSGHGKLARQMTLLMAFCDYVGNCIKDVVSAPRPSCPPVRRVTATKDEEENAMEYGL 86 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHccHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCCcchhhhhcccccccCCCCCCC
Confidence 56667777766554444433 33434444555556666777788889999999999986431110 124568999
Q ss_pred CchhHHHHHHHHHHHHHhhh-hh---h-hHH--HHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHh
Q 029264 114 PSGHASRVFFVASFISLLDD-FS---G-NCW--LVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLK 185 (196)
Q Consensus 114 PSgHa~~a~~~~~~~~~~~~-~~---~-~~~--~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~ 185 (196)
||||+++++++++++..... +. . +.+ ...++.++++++++||+|+|+||++||++|+++|.+++.+.+.+.+
T Consensus 87 PSgHt~nA~av~~~ll~~l~~~~~~~~~~~~~~~~~l~~l~allV~~SRlYLGvH~psDVl~G~~lG~~i~~~~~~~~~ 165 (352)
T PLN02525 87 PSSHTLNTVCLSGYLLHYVLSYLQNVDASVIFAGLALFCLLVALVGFGRLYLGMHSPIDIIAGLAIGLVILAFWLTVDE 165 (352)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHheeccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877544322 11 1 111 2344677889999999999999999999999999999988766654
No 16
>cd03390 PAP2_containing_1_like PAP2, subfamily similar to human phosphatidic_acid_phosphatase_type_2_domain_containing_1. Most likely membrane-associated phosphatidic acid phosphatases. Plant members of this group are constitutively expressed in many tissues and exhibit both diacylglycerol pyrophosphate phosphatase activity as well as phosphatidate (PA) phosphatase activity, they may have a more generic housekeeping role in lipid metabolism.
Probab=99.91 E-value=5.8e-24 Score=161.94 Aligned_cols=114 Identities=30% Similarity=0.367 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCCCCC----CCCcC-----------------CCCCCCCCCchhHHHHHHHHHHH
Q 029264 70 LIQFLVGLLVDLLFVGLVKSIFRRSRPLYNP----DMKPA-----------------VSVDHFSFPSGHASRVFFVASFI 128 (196)
Q Consensus 70 ~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~----~~~~~-----------------~~~~~~sfPSgHa~~a~~~~~~~ 128 (196)
...+..+++++.+++.++|..++|+||+..+ +.... .+++.+||||||++.+++.++++
T Consensus 48 ~~~~~~~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHas~a~~~~~~l 127 (193)
T cd03390 48 LLGLLLSVSLNGVITNVLKNYAGRPRPDFLARCFPDGGTPSDTLVGIDICCTGDPGVLKEGRKSFPSGHSSFAFAGLGFL 127 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHhCCCCCcccccccCCCeecCCCHHHHHHhhcCCCCccHHHHHHHHHHH
Confidence 3446677778888999999999999998531 11000 01234799999999999877776
Q ss_pred HHhhhhhh----------hHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHH
Q 029264 129 SLLDDFSG----------NCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRF 183 (196)
Q Consensus 129 ~~~~~~~~----------~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~ 183 (196)
.++...+. +..+....+++++++|+||+|+|+||++||++|+++|..++.++++.
T Consensus 128 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~SRi~~g~H~~sDVlaG~~lG~~~a~~~~~~ 192 (193)
T cd03390 128 SLYLAGKLHIFDPRGSSWRLLLALLPLLLAILVAVSRTRDYRHHFSDVIAGSLIGLIIAYLSYRQ 192 (193)
T ss_pred HHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHheeEe
Confidence 55432211 22334456788999999999999999999999999999999887653
No 17
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=99.91 E-value=6.3e-23 Score=159.05 Aligned_cols=118 Identities=22% Similarity=0.201 Sum_probs=85.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCC-CC-----------C--CcCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 029264 66 RRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYN-PD-----------M--KPAVSVDHFSFPSGHASRVFFVASFISLL 131 (196)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~-~~-----------~--~~~~~~~~~sfPSgHa~~a~~~~~~~~~~ 131 (196)
+|+....+..+..++..++.++|..++|+||... .+ . .+..|++++||||||++.+++++..+...
T Consensus 13 ~~~~g~~l~~~~~~~~~ln~vlK~ii~r~RP~~~~~~~~~~~~~~~p~~~~~~l~c~tgysfPSGHam~a~a~~~~l~~~ 92 (235)
T cd03381 13 SQSVGIKLLWVAVIGDWLNLVFKWILFGQRPYWWVHETDYYSNSSVPKIEQFPLTCETGPGSPSGHAMGTTAVLLVMVTA 92 (235)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCchhcccccccccccccccccccccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 3444555555555555589999999999999852 11 0 12357889999999999988776664432
Q ss_pred h----h-hh----hhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHH
Q 029264 132 D----D-FS----GNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRF 183 (196)
Q Consensus 132 ~----~-~~----~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~ 183 (196)
. + +. .+.........+.+++++||+|+|+|||+||++|+++|..++....+.
T Consensus 93 l~~~~~~r~~~~~~~~~~~~~~~~~~~~V~~SRvYLgvHfpsDVlaG~~lGi~~~~~~~~~ 153 (235)
T cd03381 93 LLSHLAGRKRSRFLRVMLWLVFWGVQLAVCLSRIYLAAHFPHQVIAGVISGIAVAETFSHI 153 (235)
T ss_pred HHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 1 1 11 122344555677788999999999999999999999999999877765
No 18
>cd03384 PAP2_wunen PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the survival of PGCs and is essential in the migration process of these cells towards the somatic gonadal precursors.
Probab=99.90 E-value=6.8e-23 Score=149.85 Aligned_cols=111 Identities=34% Similarity=0.445 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCCCC----CCCCc---------------------CCCCCCCCCCchhHHHHHHH
Q 029264 70 LIQFLVGLLVDLLFVGLVKSIFRRSRPLYN----PDMKP---------------------AVSVDHFSFPSGHASRVFFV 124 (196)
Q Consensus 70 ~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~----~~~~~---------------------~~~~~~~sfPSgHa~~a~~~ 124 (196)
...+..++.++.+++.++|..++||||+.. ++... ...+.++||||||++.+++.
T Consensus 6 ~~~~~~~~~~~~l~~~~lK~~igrpRP~fl~~c~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SFPSGHs~~a~~~ 85 (150)
T cd03384 6 VGVFLFGLFATQLLTDLGKYVTGRLRPHFLDVCKPNYTDLTCSLDHQYIADCTCCTGDPDLIREARLSFPSGHASLSMYA 85 (150)
T ss_pred ehHHHHHHHHHHHHHHHHHHHhCCCCCChHhhcCCCCCCcccccCccccccceeeCCCHHHHhcCccCCCcHhHHHHHHH
Confidence 345677888888999999999999999854 11110 01345789999999999877
Q ss_pred HHHHHHhhhhhh--------hHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 125 ASFISLLDDFSG--------NCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 125 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
++++.++...+. +..+....+.+++++++||+|+|.||++||++|+++|..++.+.
T Consensus 86 ~~~l~l~l~~~~~~~~~~~~~~~~~~~~~~~a~~v~~sRv~~~~H~~sDviaG~~lG~~~~~~~ 149 (150)
T cd03384 86 AVFLALYLQARLKLRGSRLLRPLLQFLLLALALYVGLSRISDYKHHWSDVLAGALLGSVIALFL 149 (150)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHhHhhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 776544332211 23455566888999999999999999999999999999998753
No 19
>PLN02250 lipid phosphate phosphatase
Probab=99.88 E-value=1.4e-21 Score=157.17 Aligned_cols=115 Identities=30% Similarity=0.366 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCCCCC----CCC----------------cCCCCCCCCCCchhHHHHHHHHHHHH
Q 029264 70 LIQFLVGLLVDLLFVGLVKSIFRRSRPLYNP----DMK----------------PAVSVDHFSFPSGHASRVFFVASFIS 129 (196)
Q Consensus 70 ~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~----~~~----------------~~~~~~~~sfPSgHa~~a~~~~~~~~ 129 (196)
...+..+++++.+++.++|..++|+||+... +.. ....++..||||||++.+++..+++.
T Consensus 100 ~l~ll~sv~~t~lit~~lK~~vGRpRPdfl~rC~P~~~~~~~~~~~~~~Ctg~~~~l~dg~~SFPSGHSS~afa~~~fLs 179 (314)
T PLN02250 100 ILGLLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFHPVTTDVLCTGAKSVIKEGHKSFPSGHTSWSFAGLGFLS 179 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCChhhhcCccccccccccccceeecCCcccccccCCCCCchhHHHHHHHHHHHH
Confidence 3456677888889999999999999998641 110 01124457999999999998887765
Q ss_pred Hhhhhh----------hhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHH
Q 029264 130 LLDDFS----------GNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFL 184 (196)
Q Consensus 130 ~~~~~~----------~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~ 184 (196)
++...+ .+..+..+.++++.++|+||++++.||++||++|+++|..++.++++.+
T Consensus 180 lyL~~kl~~~~~~~~~~r~~l~~lpll~A~lVa~SRI~dy~Hh~sDVlaG~lIG~~~A~~~y~~~ 244 (314)
T PLN02250 180 LYLSGKIRVFDRRGHVAKLCIVFLPLLVAALVGVSRVDDYWHHWQDVFAGALIGLTVASFCYLQF 244 (314)
T ss_pred HHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 443211 1233445567888999999999999999999999999999999988754
No 20
>PLN02715 lipid phosphate phosphatase
Probab=99.88 E-value=2.5e-21 Score=156.22 Aligned_cols=115 Identities=36% Similarity=0.423 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCCCC----CCCCc---------------CCCCCCCCCCchhHHHHHHHHHHHHH
Q 029264 70 LIQFLVGLLVDLLFVGLVKSIFRRSRPLYN----PDMKP---------------AVSVDHFSFPSGHASRVFFVASFISL 130 (196)
Q Consensus 70 ~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~----~~~~~---------------~~~~~~~sfPSgHa~~a~~~~~~~~~ 130 (196)
...+..+++++.+++.++|..++||||+.. ++... ...++..||||||++.+++..+++.+
T Consensus 125 ~l~l~~al~~t~lit~~lK~~vGRpRPdfl~rC~Pd~~~~~~~l~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~~Lsl 204 (327)
T PLN02715 125 ILGLLFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALGGVICHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSL 204 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCchhhcCccccccccccccccccCccccccccCCCCCchhHHHHHHHHHHHHH
Confidence 355677888888999999999999999944 11110 11245689999999999988887655
Q ss_pred hhhhhh----------hHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHH
Q 029264 131 LDDFSG----------NCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFL 184 (196)
Q Consensus 131 ~~~~~~----------~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~ 184 (196)
+...+. +..+..+.++++.++++||++++.|+++||++|+++|..+++++++.+
T Consensus 205 ~L~~kl~~~~~~~~~~k~~l~~lpll~A~lIalSRv~Dy~Hh~sDVlaG~lLG~~~a~~~y~~~ 268 (327)
T PLN02715 205 YLSGKIKAFNGEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGILVAAFCYRQF 268 (327)
T ss_pred HHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 443221 223445567888899999999999999999999999999999988865
No 21
>KOG4268 consensus Uncharacterized conserved protein containing PAP2 domain [Function unknown]
Probab=99.88 E-value=2.1e-21 Score=137.62 Aligned_cols=169 Identities=32% Similarity=0.466 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHhCCchhHHHHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHHHhh
Q 029264 14 HHRIITLDAAVSKSIHTLFHTSIPGSLLLLLEYSADFRFSFPLALSLYFT----RVRRPYLIQFLVGLLVDLLFVGLVKS 89 (196)
Q Consensus 14 ~~~l~~~D~~i~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~lK~ 89 (196)
++.....|....+...-..-+. +-.++...+++..++.+...+.+- ...+.....+.+++.+..+.+.+.|.
T Consensus 10 I~~~~~~~~~~~~a~~~asa~~----~~~~i~~~~hg~pwf~fg~i~~l~k~~s~~~q~~Lv~llLgLlfDli~vaivk~ 85 (189)
T KOG4268|consen 10 ICMSKRLGVCAGRAASWASARS----MVKLIGITGHGIPWFGFGTILCLVKSSSLAGQEVLVNLLLGLLFDLITVAIVKK 85 (189)
T ss_pred echHHHHHHHHHhHhhhhhccc----HHHHHHHhhccCchhhcchhhHhhhhcchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666554333333 344455555555555433322222 23445677888999999999999999
Q ss_pred hhcCCCCCCC-CCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHH
Q 029264 90 IFRRSRPLYN-PDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLA 168 (196)
Q Consensus 90 ~~~r~RP~~~-~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~ 168 (196)
.++|.||... +........+-|||||||++.++.++.+..-..... .+......+.|+..+|+||+.+|.||.+||++
T Consensus 86 ~f~R~rP~~t~pS~l~~~t~DiYsFPsGHaSRaamv~~~~l~~a~~a-~Plyv~l~~~walvvglSRv~lGRHyvtDVla 164 (189)
T KOG4268|consen 86 LFKRRRPYETSPSLLDYLTMDIYSFPSGHASRAAMVSKFFLSHAVLA-VPLYVLLLVLWALVVGLSRVMLGRHYVTDVLA 164 (189)
T ss_pred HHHhcCcccCCHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 9999999976 444333466789999999999887765432111111 23334457899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 029264 169 GACLGVLEAAFVFRFLKVK 187 (196)
Q Consensus 169 G~~lG~~~~~l~~~~~~~~ 187 (196)
|+.+|++-+.++..+.+..
T Consensus 165 G~fiGylearl~l~~~~~~ 183 (189)
T KOG4268|consen 165 GFFIGYLEARLVLLVWMPS 183 (189)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 9999999999988876543
No 22
>smart00014 acidPPc Acid phosphatase homologues.
Probab=99.87 E-value=2.1e-21 Score=136.21 Aligned_cols=104 Identities=38% Similarity=0.529 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCCCC-------CCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHH
Q 029264 76 GLLVDLLFVGLVKSIFRRSRPLYNP-------DMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSG-NCWLVLGVWTW 147 (196)
Q Consensus 76 ~~~~~~~i~~~lK~~~~r~RP~~~~-------~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~ 147 (196)
+.+.+..++..+|..++|+||+... ......++.++||||||++.+++.+.++....++.. +.+.......+
T Consensus 3 ~~~~~~~~~~~lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~sfPSgHa~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (116)
T smart00014 3 LAVVSLLFTGVIKNYFGRPRPFFLDIGDACCTPNFLLTLEAGYSFPSGHTAFAFAFALFLLLYLPARAARKLLIILLLLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHhCCCCcCcccccccccCcchhhhcCCCCCcChHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3566778899999999999998642 111233567889999999999988887766555433 33455567888
Q ss_pred HHHHHHhhhhcCccChhHhHHHHHHHHHHHHH
Q 029264 148 AVLTSCSRVLLGRHFVSDVLAGACLGVLEAAF 179 (196)
Q Consensus 148 ~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l 179 (196)
+.++++||+|+|.||++|+++|+.+|..++.+
T Consensus 83 ~~~~~~sRi~~g~H~~~Dv~~G~~lG~~v~~~ 114 (116)
T smart00014 83 ALVVGFSRVYLGAHWPSDVLAGSLLGILIAAV 114 (116)
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998864
No 23
>PLN02731 Putative lipid phosphate phosphatase
Probab=99.87 E-value=3.2e-21 Score=155.67 Aligned_cols=116 Identities=30% Similarity=0.370 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCCCCCC----CCCCc---------------CCCCCCCCCCchhHHHHHHHHHHHHH
Q 029264 70 LIQFLVGLLVDLLFVGLVKSIFRRSRPLYN----PDMKP---------------AVSVDHFSFPSGHASRVFFVASFISL 130 (196)
Q Consensus 70 ~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~----~~~~~---------------~~~~~~~sfPSgHa~~a~~~~~~~~~ 130 (196)
.+.+..+++++.+++.++|..++||||+.. ++... ...++..||||||++.+++..+++.+
T Consensus 119 ilgll~s~~~t~liT~ilK~~vGRpRPdfl~rC~P~~~~~~~~~~~~iCt~~~~~l~dg~~SFPSGHSS~sfagl~fLsl 198 (333)
T PLN02731 119 VLGLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLGDVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSL 198 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCchhhcCccccccccccccceecCchhcccccCCCCCchhHHHHHHHHHHHHH
Confidence 345667788888999999999999999853 11110 11234569999999999988888665
Q ss_pred hhhhhh----------hHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHh
Q 029264 131 LDDFSG----------NCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLK 185 (196)
Q Consensus 131 ~~~~~~----------~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~ 185 (196)
+...+. +..+..+.+++++++++||++.+.|+++||++|+++|.+++++++..+.
T Consensus 199 yL~~kl~~~~~~~~~~rl~l~~lpll~A~lIalSRV~Dy~Hh~sDVlaG~lLG~~iA~~~Y~~yf 263 (333)
T PLN02731 199 YLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFF 263 (333)
T ss_pred HHHHhhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHc
Confidence 442211 2334455678899999999999999999999999999999999987553
No 24
>PF01569 PAP2: PAP2 superfamily This family includes the following Prosite family; InterPro: IPR000326 This entry represents type 2 phosphatidic acid phosphatase (PAP2; 3.1.3.4 from EC) enzymes, such as phosphatidylglycerophosphatase B 3.1.3.27 from EC from Escherichia coli. PAP2 enzymes have a core structure consisting of a 5-helical bundle, where the beginning of the third helix binds the cofactor []. PAP2 enzymes catalyse the dephosphorylation of phosphatidate, yielding diacylglycerol and inorganic phosphate []. In eukaryotic cells, PAP activity has a central role in the synthesis of phospholipids and triacylglycerol through its product diacylglycerol, and it also generates and/or degrades lipid-signalling molecules that are related to phosphatidate. Other related enzymes have a similar core structure, including haloperoxidases such as bromoperoxidase (contains one core bundle, but forms a dimer), chloroperoxidases (contains two core bundles arranged as in other family dimers), bacitracin transport permease from Bacillus licheniformis, glucose-6-phosphatase from rat. The vanadium-dependent haloperoxidases exclusively catalyse the oxidation of halides, and act as histidine phosphatases, using histidine for the nucleophilic attack in the first step of the reaction []. Amino acid residues involved in binding phosphate/vanadate are conserved between the two families, supporting a proposal that vanadium passes through a tetrahedral intermediate during the reaction mechanism.; GO: 0003824 catalytic activity, 0016020 membrane; PDB: 1QI9_B 1IW8_A 1EOI_A 1D2T_A 1QHB_D 1UP8_C 2IPB_A 1VNS_A 1VNF_A 1VNE_A ....
Probab=99.84 E-value=2.9e-21 Score=137.50 Aligned_cols=118 Identities=35% Similarity=0.498 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCC---cC---CCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhH--HHHH
Q 029264 71 IQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMK---PA---VSVDHFSFPSGHASRVFFVASFISLLDDFSGNC--WLVL 142 (196)
Q Consensus 71 ~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~---~~---~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~--~~~~ 142 (196)
+.+..+++.+..++..+|..++|+||....... .. ....++||||||++.+++.+.++....+...+. ....
T Consensus 3 ~~~~~~~~~~~~~~~~lk~~~~~~rP~~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~ 82 (129)
T PF01569_consen 3 LALLFALILAAILNNVLKWIFGRPRPFFYIPNYGLYPQHWPFQSPFNSFPSGHAAIAAAFAFFLAYYLGSRGWIRILLFL 82 (129)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHTB--HHHHHHHHHCHHTCHHCHTTS-SSS-HHHHHHHHHHHHHHHHCCCCHHHSEEHHH
T ss_pred cccccchhhhHHHHHHHHHhhCCCCcCcccccCcccccCccccCCCCcCcchhhhhHHHHHhhhhhhhhccccccchhhH
Confidence 456667777888888999999999998651110 00 111257999999999999888887776655322 3456
Q ss_pred HHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHhhhh
Q 029264 143 GVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLKVKT 188 (196)
Q Consensus 143 ~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~~~~ 188 (196)
....++.+++++|+|.|.||++|+++|.++|..++.+..+..++++
T Consensus 83 ~~~~~~~~v~~srv~~g~H~~~Dvi~G~~lg~~~~~~~~~~~~~~~ 128 (129)
T PF01569_consen 83 LAIVLAFLVALSRVYLGAHFFSDVIAGILLGILIAYLFYRVYKKRR 128 (129)
T ss_dssp HHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHHHHHHHHCCHCHHH-
T ss_pred HHHHHHHHhhcCEEEcCeEehHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 6788899999999999999999999999999999999988777654
No 25
>cd01610 PAP2_like PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies. Several members of this superfamily have been predicted to be transmembrane proteins.
Probab=99.83 E-value=1.7e-19 Score=126.63 Aligned_cols=107 Identities=42% Similarity=0.580 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCCCCCC-----cCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHH
Q 029264 74 LVGLLVDLLFVGLVKSIFRRSRPLYNPDMK-----PAVSVDHFSFPSGHASRVFFVASFISLLDDFSG-NCWLVLGVWTW 147 (196)
Q Consensus 74 ~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~-----~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~ 147 (196)
.........++..+|..++++||....+.. ...+.+++||||||++.+++.+.++....+... +++.......+
T Consensus 9 ~~~~~~~~~~~~~~k~~~~~~rP~~~~~~~~~~~~~~~~~~~~sfPSgH~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 88 (122)
T cd01610 9 LLALLAGLLLTGVLKYLFGRPRPYFLLRCGPDGDPLLLTEGGYSFPSGHAAFAFALALFLALLLPRRLLRLLLGLLLLLL 88 (122)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCChHHhcCCccchhhhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444445788999999999999763222 234667899999999999988888776654322 34667778899
Q ss_pred HHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 148 AVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 148 ~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
+..+++||+++|.||++|+++|.++|..++...
T Consensus 89 ~~~~~~sri~~g~H~~~Dv~~G~~lg~~~~~~~ 121 (122)
T cd01610 89 ALLVGLSRVYLGVHYPSDVLAGALLGILVALLV 121 (122)
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998653
No 26
>cd03380 PAP2_like_1 PAP2_like_1 proteins, a sub-family of PAP2, containing bacterial acid phosphatase, vanadium chloroperoxidases and vanadium bromoperoxidases.
Probab=99.81 E-value=6.2e-19 Score=135.88 Aligned_cols=107 Identities=28% Similarity=0.204 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCC--CCcC-----CCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHH
Q 029264 68 PYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPD--MKPA-----VSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWL 140 (196)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~--~~~~-----~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~ 140 (196)
+....+..++.-+.+++..+|..++|+||....+ ..+. ....+.||||||++.+++.+.++..+.+...
T Consensus 93 ~~~~~l~~a~~da~~~~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~l~~~~~~~~---- 168 (209)
T cd03380 93 RLYALLARALTDAGIATWDAKYHYNRPRPFVAIRLQWLPICTPEEGTPKHPSYPSGHATFGGAAALVLAELFPERA---- 168 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCchhhhccCCCcccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHH----
Confidence 4555556666666677899999999999997641 1111 2455789999999999999988877766432
Q ss_pred HHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHH
Q 029264 141 VLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAF 179 (196)
Q Consensus 141 ~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l 179 (196)
..+..++..++.||+|.|+||++||++|..+|..++..
T Consensus 169 -~~~~~~a~~~~~SRv~~G~H~~sDv~aG~~lG~~i~~~ 206 (209)
T cd03380 169 -AELLARAAEAGNSRVVAGVHWPSDVEAGRILGEAIAAA 206 (209)
T ss_pred -HHHHHHHHHHHHHhhhCCeecHHHHHHHHHHHHHHHHH
Confidence 23456788999999999999999999999999988744
No 27
>cd03397 PAP2_acid_phosphatase PAP2, bacterial acid phosphatase or class A non-specific acid phosphatases. These enzymes catalyze phosphomonoester hydrolysis, with optimal activity in low pH conditions. They are secreted into the periplasmic space, and their physiological role remains to be determined.
Probab=99.81 E-value=3.7e-18 Score=133.22 Aligned_cols=159 Identities=19% Similarity=0.095 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH-hCCchhHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHHHHHHhhhh
Q 029264 14 HHRIITLDAAVSKSIHTLFHTSIPGSLLLLLEY-SADFRFSFPLALSLYFT-RVRRPYLIQFLVGLLVDLLFVGLVKSIF 91 (196)
Q Consensus 14 ~~~l~~~D~~i~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~lK~~~ 91 (196)
-+.-..-|.......+..+++. ........ -++... +.-.+...+- .+..+....+-.+..-....+..+|..+
T Consensus 49 ~S~~~~~d~~~~~~~~~~~~~~---~~~~A~~d~~~~~~~-~~~~~~~~l~~~~~p~~~~ll~~~~~da~~~~~~~K~~~ 124 (232)
T cd03397 49 GSAAFAADLAAYLAARALRGTP---RWALATTDADLSFPG-AANAFSCALGEERTPELYRLLRRVLEDAGSATYPAKKYY 124 (232)
T ss_pred CCHHHHHHHHHHHHHHhccCcH---HHHHHHHhhhcCchh-HHHHhhhccCcccCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4455667888888888766543 12221221 111100 0000000110 1222333333333434444478899999
Q ss_pred cCCCCCCCCCCC-cCC-----CCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhH
Q 029264 92 RRSRPLYNPDMK-PAV-----SVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSD 165 (196)
Q Consensus 92 ~r~RP~~~~~~~-~~~-----~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sD 165 (196)
+|+||+...+.. ... ...++||||||++.+++++.++....+++. ..+..++..+|.||||.|+||++|
T Consensus 125 ~r~RP~~~~~~~~~~~~~~~~~~~~~SfPSGHa~~a~a~a~~La~~~p~~~-----~~l~~~a~~~g~SRv~~GvH~psD 199 (232)
T cd03397 125 NRPRPFVLNDEPICTPPDESGLAKDGSYPSGHTAAGYAWALILAELVPERA-----DEILARGSEYGQSRIVCGVHWPSD 199 (232)
T ss_pred CCCCCCccCCCCcccccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCCcCHHH
Confidence 999999763221 111 345789999999999988888776665432 224556788999999999999999
Q ss_pred hHHHHHHHHHHHHHHH
Q 029264 166 VLAGACLGVLEAAFVF 181 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~ 181 (196)
|++|.++|..+.....
T Consensus 200 V~aG~~lG~~~~a~l~ 215 (232)
T cd03397 200 VMGGRIMAAALVAALL 215 (232)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999998865544
No 28
>COG0671 PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism]
Probab=99.80 E-value=3.5e-18 Score=131.50 Aligned_cols=117 Identities=34% Similarity=0.505 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--hhcCCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhh----hHHHHH
Q 029264 69 YLIQFLVGLLVDLLFVGLVKS--IFRRSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSG----NCWLVL 142 (196)
Q Consensus 69 ~~~~~~~~~~~~~~i~~~lK~--~~~r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~----~~~~~~ 142 (196)
..................+|. .+.+|||..... ....+.++||||||++.+++.+.++....+... +.....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~sfPSgHt~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 169 (232)
T COG0671 92 LALKLLVGLPRPLIVLSALKTWHIFARPRPGLLVA--LVLGASGYSFPSGHAAGAAAAALLLALLLPLRRALLRRVLLLI 169 (232)
T ss_pred HHHHHHHHhHHHHHHHHHHhccccccCCCCcchhc--cccCcccCCCCChhHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 344455555566677778887 889999975432 223456889999999998887776665544332 233446
Q ss_pred HHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHhhh
Q 029264 143 GVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLKVK 187 (196)
Q Consensus 143 ~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~~~ 187 (196)
...+++.++++||+|+|+|||+||++|.++|..++.+.....++.
T Consensus 170 ~~~~~~~lv~~SRv~lGvH~~~DVi~G~~~g~~~~~~~~~~~~~~ 214 (232)
T COG0671 170 LLLLLAALVGLSRVYLGVHYPSDVIGGALLGALAALLLLLLLRPL 214 (232)
T ss_pred HHHHHHHHHHHHHHhcccccchHHHhhHHHHHHHHHHHHHHHhcc
Confidence 678888999999999999999999999999999999998877654
No 29
>KOG3030 consensus Lipid phosphate phosphatase and related enzymes of the PAP2 family [Lipid transport and metabolism]
Probab=99.74 E-value=3.9e-17 Score=131.40 Aligned_cols=117 Identities=34% Similarity=0.485 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCC----CCCC-------------cCCCCC---------CCCCCchhHHHH
Q 029264 68 PYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYN----PDMK-------------PAVSVD---------HFSFPSGHASRV 121 (196)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~----~~~~-------------~~~~~~---------~~sfPSgHa~~a 121 (196)
+....+..+++++.+++.++|..+||+||+.. |+.. ...|.+ ..||||||++.+
T Consensus 110 ~~~~~~lfgl~~t~~~t~~~K~~vGRlRP~Fl~vC~P~~~~~~~~~~~~~yi~~~~Ctg~~~~~i~e~rkSFPSGHsS~s 189 (317)
T KOG3030|consen 110 RFVGVFLFGLAATQLFTDIIKLAVGRLRPHFLDVCQPDGTDGSTCSDSNLYIEDFICTGPDPDVVREGRKSFPSGHSSFS 189 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeccccCCccCCCCCcccccccccceeCCCCHHHHHHHHcCCCCccHHHH
Confidence 34566778888899999999999999999955 3221 112332 469999999999
Q ss_pred HHHHHHHHHhhhhhh---------hHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHH
Q 029264 122 FFVASFISLLDDFSG---------NCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFL 184 (196)
Q Consensus 122 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~ 184 (196)
+...+++.++...+. |..+.++.+.+++.+|+||+-...|+.+||++|+++|..+++..+...
T Consensus 190 ~y~~~flalyl~~~~~~~~~~rllr~~l~f~~l~~A~~v~lSRV~DYkHHwsDV~aG~liG~~~A~~~~~~v 261 (317)
T KOG3030|consen 190 FYAMGFLALYLQARLFWFGRGRLLRPLLQFLPLMLALLVGLSRVSDYKHHWSDVLAGALIGAFVAYFLYRYV 261 (317)
T ss_pred HHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHeeehhcccccccHHHHHHHHHHHHHHHHHHhhh
Confidence 988887765443322 556777778999999999999999999999999999999999887643
No 30
>KOG2822 consensus Sphingoid base-phosphate phosphatase [Lipid transport and metabolism]
Probab=99.72 E-value=9.6e-17 Score=128.92 Aligned_cols=152 Identities=16% Similarity=0.208 Sum_probs=105.8
Q ss_pred hccCCchHHHHHHHHHhCCchhHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCcCC---C
Q 029264 31 LFHTSIPGSLLLLLEYSADFRFSFPLALSLYFTRVRRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKPAV---S 107 (196)
Q Consensus 31 ~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~~~---~ 107 (196)
.++++ .|..+...+.+|+..+++ +++-...|...+.....+....+.+.-+.+.+|..+.-|||..+|-.+... .
T Consensus 76 ~rn~f-ld~yF~yts~lGsh~FYi-lfLP~~~W~g~~~ltrdm~~i~~~~~Ylggc~KD~~~lPRP~sPPvvrltls~~~ 153 (407)
T KOG2822|consen 76 VRNPF-LDVYFSYTSLLGSHVFYI-LFLPFPFWNGDPYLTRDMTYIWVLVMYLGGCIKDYWCLPRPSSPPVVRLTLSEDT 153 (407)
T ss_pred hcCch-HHhhhhhhhhhcchhhhe-eehhhHHhcCChhHhhHHHHHHHHHHHHhhhhhheeecCCCCCCCeEEEEeccch
Confidence 44444 789999999999988754 444444442222222233333444556677899999999999775443222 3
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhh-hhhh-----hHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHH
Q 029264 108 VDHFSFPSGHASRVFFVASFISLLD-DFSG-----NCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVF 181 (196)
Q Consensus 108 ~~~~sfPSgHa~~a~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~ 181 (196)
+.+|++||.||++|++++....+.. ...+ ...+..++..+..+++++|+|.|+|..-|+++|.++|+++..+.+
T Consensus 154 ~~EYG~PStHt~natais~~~~~~ls~~d~~s~p~~~lgl~lv~~y~~lv~lgRiY~GMHgvlDi~sG~ligvl~~~~~~ 233 (407)
T KOG2822|consen 154 TKEYGMPSTHTMNATAISFYFFLVLSTMDRESYPIQYLGLSLVLLYYALVCLGRIYCGMHGVLDIVSGLLIGVLILILRY 233 (407)
T ss_pred hhhhCCCcchhhhhhHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHhhhHHHHHHhhhhh
Confidence 4579999999999988877632221 1111 223445557788999999999999999999999999999988877
Q ss_pred HHH
Q 029264 182 RFL 184 (196)
Q Consensus 182 ~~~ 184 (196)
.+-
T Consensus 234 ~~~ 236 (407)
T KOG2822|consen 234 PFV 236 (407)
T ss_pred hHH
Confidence 643
No 31
>cd03398 PAP2_haloperoxidase PAP2, haloperoxidase_like subfamily. Haloperoxidases catalyze the oxidation of halides such as bromide or chloride by hydrogen peroxide, which results in subsequent halogenation of organic substrates, or halide-assisted disproportionation of hydrogen peroxide forming dioxygen. They are likely to participate in the biosynthesis of halogenated natural products, such as volatile halogenated hydrocarbons, chiral halogenated terpenes, acetogenins and indoles.
Probab=99.71 E-value=6.4e-17 Score=126.48 Aligned_cols=113 Identities=27% Similarity=0.181 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCC-C--------------CCCcC-CCCCCCCCCchhHHHHHHHHHHHHHh
Q 029264 68 PYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYN-P--------------DMKPA-VSVDHFSFPSGHASRVFFVASFISLL 131 (196)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~-~--------------~~~~~-~~~~~~sfPSgHa~~a~~~~~~~~~~ 131 (196)
+....+..++.-+.+.+...|..++|+||... . ++.+. ......||||||++.+++++.++..+
T Consensus 86 ~~~a~l~~a~~da~ia~~~~K~~~~r~RP~~~~~~~~~~~~~~~~~~~~w~p~~~~p~~psyPSGHa~~a~a~a~vL~~~ 165 (232)
T cd03398 86 RLFAAVNAAMTDAGIAAWDAKYHYRRWRPVTAIRLADTDGNPATEADPYWLPLAGTPPHPSYPSGHATFAGAAATVLKAL 165 (232)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccCHHHHHHhhcccCCCCCCCCCcccccCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 45555556666666778899999999999853 1 11222 24457799999999999999887766
Q ss_pred hhhhhh----------------HHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 132 DDFSGN----------------CWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 132 ~~~~~~----------------~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
.+.... .+....+..++..++.||+|.|+||++|+++|..+|..++-.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~SRvy~GvH~~sDv~~G~~lG~~va~~v 230 (232)
T cd03398 166 FGSDKVPDTVSEPDEGGPSTGVTRVWAELNELADEVAISRVYAGVHFRSDDAAGAALGEQIGAAA 230 (232)
T ss_pred hCCCCCCCCccccccCCCCCCCcccHhHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHHHHHH
Confidence 654211 0123445667889999999999999999999999999987654
No 32
>cd03386 PAP2_Aur1_like PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.
Probab=99.66 E-value=1.7e-14 Score=109.21 Aligned_cols=70 Identities=24% Similarity=0.321 Sum_probs=57.8
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHH
Q 029264 108 VDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVF 181 (196)
Q Consensus 108 ~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~ 181 (196)
.+.++|||+|++.++..+..++... +++...+..++++++++||+|+|.||++|+++|.++|.++..+..
T Consensus 114 ~~~~~fPS~H~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~i~~s~v~~~~H~~~Dv~~G~~l~~~~~~~~~ 183 (186)
T cd03386 114 NPFNAFPSLHVAWAVLAALFLWRHR----RRLLRWLAVLWPLLIWLSTLYLGNHYFIDLVGGIALALLSFYLAR 183 (186)
T ss_pred CCcceeCcHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCccHHHHHHHHHHHHHHHHHhh
Confidence 4567999999999988777665433 234667778899999999999999999999999999998877654
No 33
>KOG3146 consensus Dolichyl pyrophosphate phosphatase and related acid phosphatases [Lipid transport and metabolism]
Probab=99.64 E-value=4.7e-14 Score=105.13 Aligned_cols=117 Identities=23% Similarity=0.342 Sum_probs=85.6
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHH--HHHhhhhhh-----
Q 029264 64 RVRRPYLIQFLVGLLVDLLFVGLVKSIFRRSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASF--ISLLDDFSG----- 136 (196)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~~lK~~~~r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~--~~~~~~~~~----- 136 (196)
-+|.-.++...++.+....++.++|..++.|||...++. .-..++++||.|+.....++++ ++.+...+.
T Consensus 51 ~rrEl~a~~~~~G~v~Ne~in~viK~il~qpRP~~~~~~---t~~s~yGMPSSHSQfM~Ffs~y~~l~~y~~~~~~~~s~ 127 (228)
T KOG3146|consen 51 FRRELAAIWFVIGQVSNEFINVVIKNILKQPRPVSFPDT---TLRSGYGMPSSHSQFMGFFSVYSSLSVYKWLGTNNFSR 127 (228)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc---ccccCCCCCchHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 334445667788999999999999999999999754322 2345899999999886555444 333322221
Q ss_pred hHHH-HHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHH
Q 029264 137 NCWL-VLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRF 183 (196)
Q Consensus 137 ~~~~-~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~ 183 (196)
..+. ..+...++..++.||+|++.|+.++|+.|+++|.+.+.+.+.+
T Consensus 128 ~~~i~s~~~laLs~~v~~sRVyl~yHt~sQVv~G~ivG~l~g~~Wf~~ 175 (228)
T KOG3146|consen 128 FLFIKSGLLLALSFYVCYSRVYLKYHTLSQVVVGAIVGGLVGILWFYL 175 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhhhhHHHHHHHH
Confidence 2222 3344677889999999999999999999999999988776654
No 34
>COG3907 PAP2 (acid phosphatase) superfamily protein [General function prediction only]
Probab=99.38 E-value=4.2e-11 Score=88.84 Aligned_cols=172 Identities=20% Similarity=0.163 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHhccCCchHHHHHHHHHhCC--chhH-HHHHHHHHHH-----hcch---HHHHHHHHHHHHHHHHH
Q 029264 16 RIITLDAAVSKSIHTLFHTSIPGSLLLLLEYSAD--FRFS-FPLALSLYFT-----RVRR---PYLIQFLVGLLVDLLFV 84 (196)
Q Consensus 16 ~l~~~D~~i~~~~~~~~~~~~~~~~~~~~~~lg~--~~~~-~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~i~ 84 (196)
.-...|+.+.+.+.+.....++-.--.++.++-+ .+.. +...+..+.. |..| |...++..++.++..+.
T Consensus 44 ~~~~lD~~lanl~ydp~G~~f~~~h~w~le~l~Hr~~K~l~Ia~~~~~Ll~~gv~~R~gra~~r~~ayvf~~~~L~~s~i 123 (249)
T COG3907 44 MGLALDQWLANLLYDPEGGQFLLKHHWILEYLIHRVGKWLSIAAGLCLLLGMGVRCRGGRAGCRASAYVFVTLVLSTSLI 123 (249)
T ss_pred hhhhHHHHHHHhccCcccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeecCcccccchhhHHHHHHHHHHHHH
Confidence 3457899999999887555444333333333322 1111 2222222222 2222 44566777788888899
Q ss_pred HHHhhhhcCCCCCCC----CCC--------CcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhh--hHHHHHHHHHHHHH
Q 029264 85 GLVKSIFRRSRPLYN----PDM--------KPAVSVDHFSFPSGHASRVFFVASFISLLDDFSG--NCWLVLGVWTWAVL 150 (196)
Q Consensus 85 ~~lK~~~~r~RP~~~----~~~--------~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 150 (196)
..+|...+...|... .+. .+....++.+||-||++..+++....+...+... ++......++.+.+
T Consensus 124 ~~lKalta~~CPWdLv~yGG~~~~~~L~~~rpp~~~pGhCfPgGHASsGfa~~aLfFa~~~~~Prla~l~l~~g~~~G~l 203 (249)
T COG3907 124 SLLKALTAMDCPWDLVRYGGGFPFIGLFESRPPLKAPGHCFPGGHASSGFAWVALFFAAWGVCPRLAWLGLMIGLVAGLL 203 (249)
T ss_pred HHHHHhhhcCCCHHHHHhCCCCcceEeecCCCCCCCCCCcCCCCCccccHHHHHHHHHHcccChHHHHHHHHHHHHHHHH
Confidence 999999999999844 111 1122345789999999998877666555554443 22333445677789
Q ss_pred HHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHhhh
Q 029264 151 TSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLKVK 187 (196)
Q Consensus 151 v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~~~ 187 (196)
.|+||+..|.||.|.-+-...+-+++.+..++++..+
T Consensus 204 ~g~sq~lrGAHFLsHnLWs~~~~WLv~Lg~f~l~~~~ 240 (249)
T COG3907 204 FGISQQLRGAHFLSHNLWSLTICWLVALGFFYLFFVS 240 (249)
T ss_pred HhHHHHhhhhhhhcchHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999888877553
No 35
>PF14378 PAP2_3: PAP2 superfamily
Probab=99.22 E-value=1.1e-09 Score=83.32 Aligned_cols=65 Identities=34% Similarity=0.453 Sum_probs=52.6
Q ss_pred CCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHH
Q 029264 111 FSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAA 178 (196)
Q Consensus 111 ~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~ 178 (196)
.+|||.|++.+...+..++- .+++++...+..++.+++.+|-++.|.||..|+++|.+++.+...
T Consensus 126 ~afPSlH~a~a~l~~~~~~~---~~~~~~~~~~~~~~~~~i~~stv~~~~HY~iDv~aG~~la~~~~~ 190 (191)
T PF14378_consen 126 AAFPSLHVAWAVLCALALWR---VGRPRWLRALFLAFNVLILFSTVYTGQHYVIDVIAGAALALLAIA 190 (191)
T ss_pred cccCchHHHHHHHHHHHHHH---ccccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 37999999998776665553 222445667888899999999999999999999999999987653
No 36
>COG1963 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.78 E-value=0.00053 Score=48.74 Aligned_cols=102 Identities=26% Similarity=0.366 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhhhhc--CCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH--
Q 029264 76 GLLVDLLFVGLVKSIFR--RSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLT-- 151 (196)
Q Consensus 76 ~~~~~~~i~~~lK~~~~--r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-- 151 (196)
+.+.+.+..+++|..+. |.|-.... .-...-++||+|++...++++.+.+-..... .+..+..++++.+
T Consensus 15 sal~a~~~AQvIKv~I~~~~~rk~~~~-----~~~sTGGMPSsHSA~VtALat~ial~~G~dS--~lFaiA~vfaiIvm~ 87 (153)
T COG1963 15 SALVAILLAQVIKVLIELIRTRKLNVT-----LLFSTGGMPSSHSALVTALATSIALTEGLDS--PLFAIAAVFAIIVMY 87 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccce-----eeeecCCCCchHHHHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHhh
Confidence 34445555666666653 22221111 1123458999999998888887776554433 2222222222222
Q ss_pred ---HHhh---------------h-------------hcCccChhHhHHHHHHHHHHHHHHHHHH
Q 029264 152 ---SCSR---------------V-------------LLGRHFVSDVLAGACLGVLEAAFVFRFL 184 (196)
Q Consensus 152 ---~~sR---------------v-------------ylg~H~~sDvl~G~~lG~~~~~l~~~~~ 184 (196)
|.=| + -+--|.|.+|++|.++|++++++.+.++
T Consensus 88 DA~GVRr~aG~QA~iLN~l~~~~~~e~~~~~~~~lKellGH~p~eV~~G~~lGI~i~~i~~~~~ 151 (153)
T COG1963 88 DATGVRRSAGVQARILNQLIEELVNEKKDFDKKRLKELLGHTPLEVFAGLLLGILIAWIFYAFF 151 (153)
T ss_pred hhhhHHHhccchHHHHHHHHHHHHHhhccCCHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1110 0 1335999999999999999999887654
No 37
>PF14360 PAP2_C: PAP2 superfamily C-terminal
Probab=97.43 E-value=0.0012 Score=42.27 Aligned_cols=64 Identities=20% Similarity=0.185 Sum_probs=45.0
Q ss_pred CCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHH
Q 029264 113 FPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEA 177 (196)
Q Consensus 113 fPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~ 177 (196)
+-|||++..+....+..-+.+++. +..........+..+..=+.-..||--||+.|..+...+-
T Consensus 6 iFSGHt~~~~l~~l~~~~y~~~~~-~~~~~~~~~~~~~~~~~ii~sr~HYTvDV~~a~~it~~~f 69 (74)
T PF14360_consen 6 IFSGHTAFLTLCALFWWEYSPRRF-WVLKVIMWLLAIIGSFLIIASRKHYTVDVVLAYYITSLVF 69 (74)
T ss_pred EEchhHHHHHHHHHHHHHHcccch-hHHHHHHHHHHHHHHHHHHHcCCCceeehhhHHHHHHHHH
Confidence 679999988777666665554332 1244555555555666666777999999999999887765
No 38
>PF02681 DUF212: Divergent PAP2 family; InterPro: IPR003832 This family is related to the acid phosphatase/vanadium-dependent haloperoxidases; members of this group are uncharacterised.
Probab=97.38 E-value=0.0021 Score=46.10 Aligned_cols=96 Identities=23% Similarity=0.257 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHhhhhcC--CCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH-
Q 029264 75 VGLLVDLLFVGLVKSIFRR--SRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLT- 151 (196)
Q Consensus 75 ~~~~~~~~i~~~lK~~~~r--~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v- 151 (196)
++.+++.++.+.+|..+.. .|.... ..--..-++||.|++...++++.+.+...... ....+..++++.|
T Consensus 8 ~~a~~a~~~AQ~iK~~~~~~~~r~~d~-----~~~~~sGGMPSSHSA~V~aLat~ig~~~G~~S--~~FAia~v~a~IVm 80 (141)
T PF02681_consen 8 IAALIAWFIAQFIKVFINYLKERKWDW-----RRFFSSGGMPSSHSATVSALATAIGLQEGFDS--PLFAIAAVFALIVM 80 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccH-----HHHhhcCCCCchHHHHHHHHHHHHHHHhCCCC--cHHHHHHHHHHhhe
Confidence 3444555666667766542 232211 01122458999999998888887766554332 1222222222222
Q ss_pred ----H------------------Hhhhh-------------cCccChhHhHHHHHHHHHHH
Q 029264 152 ----S------------------CSRVL-------------LGRHFVSDVLAGACLGVLEA 177 (196)
Q Consensus 152 ----~------------------~sRvy-------------lg~H~~sDvl~G~~lG~~~~ 177 (196)
| +.+.. .=-|.|.+|++|.++|++++
T Consensus 81 yDA~GVRr~aG~qA~~lN~l~~~~~~~~~~~~~~~~~~LKE~lGHtp~EV~~G~llGi~vA 141 (141)
T PF02681_consen 81 YDAMGVRRAAGKQAKVLNQLIEELEEEHQSEPPIQEKKLKELLGHTPLEVFAGALLGIVVA 141 (141)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcccccCCCCHHHHHHHHHHHHhhC
Confidence 1 11111 23599999999999999863
No 39
>KOG3058 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.84 E-value=2.2 Score=35.30 Aligned_cols=65 Identities=18% Similarity=0.123 Sum_probs=41.9
Q ss_pred CCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHH
Q 029264 112 SFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEA 177 (196)
Q Consensus 112 sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~ 177 (196)
=.=|||+...+..+.+..-+.+++. .++.++..++++.-.+.=+.-+.||--||+.++-+-..+.
T Consensus 210 lmfSGHTlvl~~~~l~~~eY~pr~~-~~L~~i~wll~~~gi~~il~sr~HYTIDVvvAyyittrvf 274 (351)
T KOG3058|consen 210 LMFSGHTLVLTLTALFITEYSPRRF-IILHWISWLLAFVGIFLILASRKHYTIDVVVAYYITTRVF 274 (351)
T ss_pred eeeecchHHHHHHHHHHHHhcccch-hHHHHHHHHHHHHHHHHHHHhCCceeEEEEEehhhHHHHH
Confidence 4679999988777776665555442 2232334444444445556678999999999988744433
No 40
>PF12270 Cyt_c_ox_IV: Cytochrome c oxidase subunit IV; InterPro: IPR021050 This family of proteins is found in bacteria. Proteins in this family are approximately 140 amino acids in length. This family is the fourth subunit of the cytochrome c oxidase complex. This subunit does not have a catalytic capacity but instead, is required for assembly and/or stability of the complex []. ; GO: 0004129 cytochrome-c oxidase activity, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=78.92 E-value=21 Score=25.57 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhc--CCCCCCCCCCCcCCCCCCCCCCchhHHH
Q 029264 71 IQFLVGLLVDLLFVGLVKSIFR--RSRPLYNPDMKPAVSVDHFSFPSGHASR 120 (196)
Q Consensus 71 ~~~~~~~~~~~~i~~~lK~~~~--r~RP~~~~~~~~~~~~~~~sfPSgHa~~ 120 (196)
..+.++..++.++...+...-+ -+||...++-......+..+|-|-|+--
T Consensus 39 ~aL~ls~~l~~mig~yl~~~~rr~~~rPED~~daEI~dgAGe~GfFsP~SwW 90 (137)
T PF12270_consen 39 VALVLSGGLALMIGFYLRFTARRIGPRPEDREDAEIADGAGELGFFSPHSWW 90 (137)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCccccccccccCCCCcCcCCCccHh
Confidence 3344444445555544444443 4688776665555566678999999854
No 41
>PF10261 Scs3p: Inositol phospholipid synthesis and fat-storage-inducing TM; InterPro: IPR019388 This entry represents the fat storage-inducing transmembrane (FIT) family of proteins, which play an important role in lipid droplet accumulation. They are endoplasmic reticulum resident membrane proteins that induce lipid droplet accumulation in cell culture and when expressed in mouse liver []; they mediate the partitioning of triglyceride from the ER into cytosolic fatty droplets by an as-yet undetermined mechanism. The FIT family of proteins are not involved in triglyceride biosynthesis []. FIT1 and FIT2 proteins are six-transmembrane-domain containing proteins with both the N and C termini residing in the cytosol. FIT2 is the more anciently conserved homologue of the FIT family; this family of proteins do not share sequence similarity to known proteins or domains.
Probab=69.42 E-value=20 Score=28.14 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=25.6
Q ss_pred HHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHH
Q 029264 145 WTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 145 ~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~ 180 (196)
.+|..+....-+| .|.+.+=+.|.++|.+..++.
T Consensus 204 ~LW~~mll~T~iy--FHT~~EKl~Gl~~g~~~~~~~ 237 (238)
T PF10261_consen 204 GLWWWMLLMTSIY--FHTILEKLSGLLFGYLGWYIT 237 (238)
T ss_pred HHHHHHHHHHHHH--HCCHHHHHHHHHHHHHhheee
Confidence 4455555566666 899999999999999876543
No 42
>PF02656 DUF202: Domain of unknown function (DUF202); InterPro: IPR003807 This entry describes proteins of unknown function.
Probab=63.71 E-value=33 Score=21.26 Aligned_cols=50 Identities=16% Similarity=0.147 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHhhhhcCcc-------ChhHhHHHHHHHHHHHHHHHHHHhhhh
Q 029264 139 WLVLGVWTWAVLTSCSRVLLGRH-------FVSDVLAGACLGVLEAAFVFRFLKVKT 188 (196)
Q Consensus 139 ~~~~~~~~~~~~v~~sRvylg~H-------~~sDvl~G~~lG~~~~~l~~~~~~~~~ 188 (196)
|........+..+++-|.....| ....+++..+++..+..+.+...++.+
T Consensus 13 W~Rt~l~l~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ry~~ 69 (73)
T PF02656_consen 13 WIRTALALVGVGLALLRFFSLDHPSSSASRRVSKVLGLLLIVLGLLTLIYGIYRYRR 69 (73)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666777777788776664 578888888888888777777666543
No 43
>PF09512 ThiW: Thiamine-precursor transporter protein (ThiW); InterPro: IPR012652 Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved, to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine.
Probab=54.35 E-value=82 Score=22.94 Aligned_cols=64 Identities=27% Similarity=0.290 Sum_probs=39.5
Q ss_pred CCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHhh
Q 029264 110 HFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 110 ~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~~ 186 (196)
...||=.|..+..+-... - + +.....++.++.-|+.+|.-.+-- .-|..+|.+.+-+.++..++
T Consensus 25 ~k~~P~QH~iNviaaVlL----G-----P---~ya~~~Af~~sliR~~lg~Gt~lA-fPGsm~GA~laGllyr~~~k 88 (150)
T PF09512_consen 25 AKCFPMQHMINVIAAVLL----G-----P---WYAVAMAFITSLIRNLLGTGTLLA-FPGSMFGALLAGLLYRKTKK 88 (150)
T ss_pred cccChHHHHHHHHHHHHh----c-----h---HHHHHHHHHHHHHHHHhCCCCHHH-hccchHHHHHHHHHHHHhCc
Confidence 568999999997643222 0 1 124455567777788888766554 44555666666566665554
No 44
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=52.14 E-value=87 Score=22.55 Aligned_cols=37 Identities=8% Similarity=0.233 Sum_probs=20.8
Q ss_pred CccChhHhHHHHHHHHHHHHHHHHHH-hhhhhhhhhhc
Q 029264 159 GRHFVSDVLAGACLGVLEAAFVFRFL-KVKTIAVSYLQ 195 (196)
Q Consensus 159 g~H~~sDvl~G~~lG~~~~~l~~~~~-~~~~~~~~~~~ 195 (196)
+...-.+.+.+.+...+.+.+..-++ +.+|++.+|+|
T Consensus 112 ~~~~d~~~i~~l~~~li~a~IwipYf~~S~RVK~TFv~ 149 (149)
T PF10754_consen 112 SPVIDAEAIRELLRSLIAAAIWIPYFLRSKRVKNTFVN 149 (149)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHhHHhhhhccC
Confidence 33333344556666666666655555 44466777764
No 45
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.31 E-value=24 Score=24.17 Aligned_cols=19 Identities=11% Similarity=-0.073 Sum_probs=9.3
Q ss_pred ChhHhHHHHHHHHHHHHHH
Q 029264 162 FVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 162 ~~sDvl~G~~lG~~~~~l~ 180 (196)
.|=-.+...++|...+.+.
T Consensus 73 sPwglIv~lllGf~AG~ln 91 (116)
T COG5336 73 SPWGLIVFLLLGFGAGVLN 91 (116)
T ss_pred CcHHHHHHHHHHHHHHHHH
Confidence 3444555555555554443
No 46
>PF13373 DUF2407_C: DUF2407 C-terminal domain
Probab=48.24 E-value=26 Score=25.21 Aligned_cols=26 Identities=23% Similarity=0.349 Sum_probs=20.9
Q ss_pred CccChhHhHHHHHHHHHHHHHHHHHH
Q 029264 159 GRHFVSDVLAGACLGVLEAAFVFRFL 184 (196)
Q Consensus 159 g~H~~sDvl~G~~lG~~~~~l~~~~~ 184 (196)
..+...|.+.|+++|+.+..++..++
T Consensus 85 ~~~~~~dlL~G~liGff~g~~~~~~L 110 (140)
T PF13373_consen 85 NSGHNDDLLWGLLIGFFFGLFSLFWL 110 (140)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHHHH
Confidence 44566899999999999999984443
No 47
>PF10389 CoatB: Bacteriophage coat protein B ; InterPro: IPR008020 The major coat protein in the capsid of filamentous bacteriophage forms a helical assembly of about 7000 identical protomers, with each protomer comprised of 46 amino acids, after the cleavage of the signal peptide. Each protomer forms a slightly curved helix that combines to form a tubular structure that encapsulates the viral DNA [].; PDB: 2IFO_A.
Probab=48.06 E-value=38 Score=19.39 Aligned_cols=21 Identities=29% Similarity=0.681 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 029264 166 VLAGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~~~~~~ 186 (196)
.++|..++..++.-.+++.|+
T Consensus 24 ~ig~avL~v~V~i~v~kwiRr 44 (46)
T PF10389_consen 24 TIGGAVLGVIVGIAVYKWIRR 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 478889999999888888776
No 48
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=41.32 E-value=1.3e+02 Score=22.27 Aligned_cols=20 Identities=20% Similarity=0.386 Sum_probs=9.8
Q ss_pred cChhHhHHHHHHHHHHHHHH
Q 029264 161 HFVSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 161 H~~sDvl~G~~lG~~~~~l~ 180 (196)
++..+.+++++.+.+...+.
T Consensus 152 ~~~~~~~aa~~~~~~a~~~~ 171 (193)
T PF06738_consen 152 SFIQEFIAAFLASLLAALLA 171 (193)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555444333
No 49
>PF07694 5TM-5TMR_LYT: 5TMR of 5TMR-LYT; InterPro: IPR011620 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the transmembrane region of the 5TM-Lyt (5TM Receptors of the LytS-YhcK type) histidine kinase []. The two-component regulatory system LytS/LytT probably regulates genes involved in cell wall metabolism. ; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0007047 cellular cell wall organization, 0016021 integral to membrane
Probab=40.58 E-value=1.2e+02 Score=21.85 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhhhcCc-cChhHhHHHHHHHHHHHHHHHH
Q 029264 143 GVWTWAVLTSCSRVLLGR-HFVSDVLAGACLGVLEAAFVFR 182 (196)
Q Consensus 143 ~~~~~~~~v~~sRvylg~-H~~sDvl~G~~lG~~~~~l~~~ 182 (196)
.+.+.+...+..|+++|. ......+...+.|...+++..+
T Consensus 62 ~~li~~~i~~~~R~~~gg~~~~~~~i~~~~~~i~~~l~~~~ 102 (169)
T PF07694_consen 62 SGLIAGLIIGIYRFLLGGPTAIPAFIIIILIGILAGLISRF 102 (169)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677788888887 2333334434444433333333
No 50
>PRK14759 potassium-transporting ATPase subunit F; Provisional
Probab=35.54 E-value=67 Score=16.43 Aligned_cols=23 Identities=26% Similarity=0.251 Sum_probs=15.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhh
Q 029264 166 VLAGACLGVLEAAFVFRFLKVKT 188 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~~~~~~~~ 188 (196)
+++|.+.-.+..++.+.++|.++
T Consensus 6 ~l~~~va~~L~vYL~~ALlrPEr 28 (29)
T PRK14759 6 SLAGAVSLGLLIYLTYALLRPER 28 (29)
T ss_pred HHHHHHHHHHHHHHHHHHhCccc
Confidence 45566656677788887777654
No 51
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=33.09 E-value=4.9e+02 Score=25.65 Aligned_cols=29 Identities=17% Similarity=0.126 Sum_probs=18.3
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHHhhhhc
Q 029264 64 RVRRPYLIQFLVGLLVDLLFVGLVKSIFR 92 (196)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~i~~~lK~~~~ 92 (196)
++|++.+..+.+.+....++..++|....
T Consensus 71 ~rr~r~Aw~~~~~~~~~~~~~~l~~~l~~ 99 (1094)
T PRK02983 71 RRRKRAAWWVLLAYLVLAALLNVALLALG 99 (1094)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55555555556666666667777887753
No 52
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=32.36 E-value=1.5e+02 Score=19.68 Aligned_cols=50 Identities=20% Similarity=0.270 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHHHHHHhhh-hcCcc-ChhHhHHHHHHHHHHHHHHHHHHhh
Q 029264 137 NCWLVLGVWTWAVLTSCSRV-LLGRH-FVSDVLAGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 137 ~~~~~~~~~~~~~~v~~sRv-ylg~H-~~sDvl~G~~lG~~~~~l~~~~~~~ 186 (196)
.+|+-.+.++.++++|+.-. +-+.+ ...|+.+|.+.|....-+.-.+.++
T Consensus 33 ~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r 84 (93)
T PF06946_consen 33 NKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNR 84 (93)
T ss_pred cchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhh
Confidence 55777777777777776554 44444 5666888888888877666555544
No 53
>PF03073 TspO_MBR: TspO/MBR family; InterPro: IPR004307 Members of this group are involved in transmembrane signalling. In both prokaryotes and mitochondria they are localized to the outer membrane, and have been shown to bind and transport dicarboxylic tetrapyrrole intermediates of the haem biosynthetic pathway [, ]. They are associated with the major outer membrane porins (in prokaryotes) and with the voltage-dependent anion channel (in mitochondria) []. Rhodobacter sphaeroides TspO (previously CrtK) is involved in signal transduction, functioning as a negative regulator of the expression of some photosynthesis genes (PpsR/AppA repressor/antirepressor regulon). This down-regulation is believed to be in response to oxygen levels. TspO works through (or modulates) the PpsR/AppA system and acts upstream of the site of action of these regulatory proteins []. It has been suggested that the TspO regulatory pathway works by regulating the efflux of certain tetrapyrrole intermediates of the haem/bacteriochlorophyll biosynthetic pathways in response to the availability of molecular oxygen, thereby causing the accumulation of a biosynthetic intermediate that serves as a corepressor for the regulated genes []. A homologue of the TspO protein in Rhizobium meliloti (Sinorhizobium meliloti) is involved in regulating expression of the ndi locus in response to stress conditions []. There is evidence that the S. meliloti TspO acts through, or in addition to, the FixL regulatory system. In animals, the peripheral-type benzodiazepine receptor (PBR, MBR) is a mitochondrial protein (located in the outer mitochondrial membrane) characterised by its ability to bind with nanomolar affinity to a variety of benzodiazepine-like drugs, as well as to dicarboxylic tetrapyrrole intermediates of the haem biosynthetic pathway. Depending upon the tissue, it was shown to be involved in steroidogenesis, haem biosynthesis, apoptosis, cell growth and differentiation, mitochondrial respiratory control, and immune and stress response, but the precise function of the PBR remains unclear. The role of PBR in the regulation of cholesterol transport from the outer to the inner mitochondrial membrane, the rate-determining step in steroid biosynthesis, has been studied in detail. PBR is required for the binding, uptake and release, upon ligand activation, of the substrate cholesterol []. PBR forms a multimeric complex with the voltage-dependent anion channel (VDAC) [] and adenine nucleotide carrier []. Molecular modeling of PBR suggested that it might function as a channel for cholesterol. Indeed, cholesterol uptake and transport by bacterial cells was induced upon PBR expression. Mutagenesis studies identified a cholesterol recognition/interaction motif (CRAC) in the cytoplasmic C terminus of PBR [, ]. In complementation experiments, rat PBR (pk18) functionally substitutes for its homologue TspO in R. sphaeroides, negatively affecting transcription of specific photosynthesis genes []. This suggests that PBR may function as an oxygen sensor, transducing an oxygen-triggered signal leading to an adaptive cellular response. These observations suggest that fundamental aspects of this receptor and the downstream signal transduction pathway are conserved in bacteria and higher eukaryotic mitochondria. The alpha-3 subdivision of the purple bacteria is considered to be a likely source of the endosymbiont that ultimately gave rise to the mitochondrion. Therefore, it is possible that the mammalian PBR remains both evolutionarily and functionally related to the TspO of R. sphaeroides.; GO: 0016021 integral to membrane
Probab=32.35 E-value=1.9e+02 Score=20.65 Aligned_cols=69 Identities=12% Similarity=-0.101 Sum_probs=35.3
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHH
Q 029264 108 VDHFSFPSGHASRVFFVASFISLLDDF-----SGNCWLVLGVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLE 176 (196)
Q Consensus 108 ~~~~sfPSgHa~~a~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~ 176 (196)
++++-||.-=+..-..++...+...+. ..++......+-+++-...+-++.|.|.+.--..-.+.-...
T Consensus 36 Pp~~~f~~vW~~ly~l~g~a~~~v~~~~~~~~~~~~~l~l~~~~l~ln~~W~~ifF~~~~~~la~~~~~~l~~~ 109 (148)
T PF03073_consen 36 PPGWVFGPVWTILYILMGIASYLVWRKGGGSPRRRRALALYAIQLALNFAWSPIFFGLRSLGLALIIILALLGL 109 (148)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhhHhcccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 345556554444333333333333322 113444455566777778888888888765544444333333
No 54
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=26.51 E-value=3e+02 Score=22.15 Aligned_cols=7 Identities=14% Similarity=0.264 Sum_probs=3.5
Q ss_pred CCchhHH
Q 029264 113 FPSGHAS 119 (196)
Q Consensus 113 fPSgHa~ 119 (196)
.|+.|.-
T Consensus 8 ~~~er~k 14 (301)
T PF14362_consen 8 SPAERNK 14 (301)
T ss_pred ChHHHHH
Confidence 4555544
No 55
>PF09604 Potass_KdpF: F subunit of K+-transporting ATPase (Potass_KdpF); InterPro: IPR011726 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the F subunit (KdpF) of a P-type K+-translocating ATPase (Kdp). KdpF is a very small integral membrane peptide. The kdpABC operon of Escherichia coli codes for the high affinity K+-translocating Kdp complex []. KdpF is found upstream of the KdpA subunit (IPR004623 from INTERPRO). Because of its very small size and highly hydrophobic character, it is sometimes missed in genome annotation. More information about this protein can be found at Protein of the Month: ATP Synthases [].
Probab=26.17 E-value=95 Score=15.25 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=13.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhh
Q 029264 166 VLAGACLGVLEAAFVFRFLKVKT 188 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~~~~~~~~ 188 (196)
+++|.+.-.+.+++.+.+.+.++
T Consensus 2 ~l~~~v~~~L~~YL~~aLl~PEr 24 (25)
T PF09604_consen 2 ILGGIVAVALFVYLFYALLRPER 24 (25)
T ss_pred hHHHHHHHHHHHHHHHHHhCccc
Confidence 34555555556667766665543
No 56
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria. Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.
Probab=25.90 E-value=95 Score=19.32 Aligned_cols=18 Identities=28% Similarity=0.399 Sum_probs=11.4
Q ss_pred hhHhHHHHHHHHHHHHHH
Q 029264 163 VSDVLAGACLGVLEAAFV 180 (196)
Q Consensus 163 ~sDvl~G~~lG~~~~~l~ 180 (196)
+.-.++|.++|..++++.
T Consensus 2 ~~g~l~Ga~~Ga~~glL~ 19 (74)
T PF12732_consen 2 LLGFLAGAAAGAAAGLLF 19 (74)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 344566777777776664
No 57
>PF15179 Myc_target_1: Myc target protein 1
Probab=23.87 E-value=1.9e+02 Score=21.85 Aligned_cols=36 Identities=33% Similarity=0.432 Sum_probs=21.4
Q ss_pred CCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhh
Q 029264 112 SFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVL 157 (196)
Q Consensus 112 sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvy 157 (196)
+|--++...||++..++-++ +++++|++++.+||=-
T Consensus 15 ~f~~~~lIlaF~vSm~iGLv----------iG~li~~LltwlSRRR 50 (197)
T PF15179_consen 15 NFDWEDLILAFCVSMAIGLV----------IGALIWALLTWLSRRR 50 (197)
T ss_pred hcchhhHHHHHHHHHHHHHH----------HHHHHHHHHHHHHhcc
Confidence 45556666666665554432 4567777777777643
No 58
>PF04147 Nop14: Nop14-like family ; InterPro: IPR007276 Emg1 and Nop14 are novel proteins whose interaction is required for the maturation of the 18S rRNA and for 40S ribosome production [].
Probab=23.76 E-value=1.9e+02 Score=27.31 Aligned_cols=86 Identities=19% Similarity=0.162 Sum_probs=50.1
Q ss_pred HHHHHHhhhhcCCCCCCCCCCCcCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCcc
Q 029264 82 LFVGLVKSIFRRSRPLYNPDMKPAVSVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGRH 161 (196)
Q Consensus 82 ~i~~~lK~~~~r~RP~~~~~~~~~~~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~H 161 (196)
.+...++....+.++.. ...++.+|||-....-+-+.+.++=..-.. .+.+....+..+-..+-+++.
T Consensus 513 ~~r~~L~~~~~~~~~~~-------l~~~~~~~P~l~~Lvllklv~~lFPTSD~~-HpVVTPalllm~~~L~q~~v~---- 580 (840)
T PF04147_consen 513 CFREVLKEMQKRFRKGA-------LKPKERSWPSLSDLVLLKLVGTLFPTSDFR-HPVVTPALLLMSEYLSQCRVR---- 580 (840)
T ss_pred HHHHHHHHHHHHHhhhc-------ccccCCCCCChhHHHHHHHHHHhcCccccc-CcchhHHHHHHHHHHhcCCCC----
Confidence 33445555555555531 112245699988877666655554322222 444555555555555555554
Q ss_pred ChhHhHHHHHHHHHHHHH
Q 029264 162 FVSDVLAGACLGVLEAAF 179 (196)
Q Consensus 162 ~~sDvl~G~~lG~~~~~l 179 (196)
.+.|+..|..+..++.-.
T Consensus 581 s~~di~~GlfL~~l~l~y 598 (840)
T PF04147_consen 581 SLRDIASGLFLCTLLLEY 598 (840)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999888776543
No 59
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only]
Probab=22.84 E-value=51 Score=25.26 Aligned_cols=23 Identities=35% Similarity=0.644 Sum_probs=18.7
Q ss_pred ccChhHhHHHHHHHHHHHHHHHH
Q 029264 160 RHFVSDVLAGACLGVLEAAFVFR 182 (196)
Q Consensus 160 ~H~~sDvl~G~~lG~~~~~l~~~ 182 (196)
.|-..|-++|.++|..++.+++-
T Consensus 209 ahLv~DFiAG~LLGA~l~~~FFP 231 (297)
T KOG1519|consen 209 AHLVNDFIAGGLLGAMLGFLFFP 231 (297)
T ss_pred HHHHHHHhhhhHHHHHHHHhhcc
Confidence 35558999999999999887764
No 60
>PF03672 UPF0154: Uncharacterised protein family (UPF0154); InterPro: IPR005359 The proteins in this entry are functionally uncharacterised.
Probab=22.36 E-value=1.7e+02 Score=18.05 Aligned_cols=10 Identities=40% Similarity=0.677 Sum_probs=4.3
Q ss_pred HHHHHHHHHH
Q 029264 168 AGACLGVLEA 177 (196)
Q Consensus 168 ~G~~lG~~~~ 177 (196)
+|.++|+.++
T Consensus 9 ~G~~~Gff~a 18 (64)
T PF03672_consen 9 VGAVIGFFIA 18 (64)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 61
>PF10947 DUF2628: Protein of unknown function (DUF2628) ; InterPro: IPR024399 Some members in this family of proteins have been annotated as YigF. Their function is currently unknown.
Probab=22.03 E-value=2.5e+02 Score=18.69 Aligned_cols=30 Identities=13% Similarity=0.021 Sum_probs=15.4
Q ss_pred hcCccChhHhHHHHHHHHHHHHHHHHHHhh
Q 029264 157 LLGRHFVSDVLAGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 157 ylg~H~~sDvl~G~~lG~~~~~l~~~~~~~ 186 (196)
.++.+...+...+.++....+...-.++.+
T Consensus 75 ~~~~~~~~~~~l~l~~~~~~g~~~n~~y~~ 104 (108)
T PF10947_consen 75 LLGFPPGLGLGLSLAISLFFGMFANYWYYR 104 (108)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444555555556666655555443
No 62
>PF14068 YuiB: Putative membrane protein
Probab=21.83 E-value=1.5e+02 Score=20.05 Aligned_cols=24 Identities=21% Similarity=0.324 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhh
Q 029264 167 LAGACLGVLEAAFVFRFLKVKTIA 190 (196)
Q Consensus 167 l~G~~lG~~~~~l~~~~~~~~~~~ 190 (196)
+.+.+.|..++-.+.+.+|++..+
T Consensus 77 l~~Gl~GAi~SG~tIr~LRk~GYq 100 (102)
T PF14068_consen 77 LSSGLAGAIVSGITIRTLRKKGYQ 100 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccc
Confidence 445566777777777878877654
No 63
>PF04892 VanZ: VanZ like family ; InterPro: IPR006976 This entry represents a conserved sequence region found in the VanZ protein and also several phosphotransbutyrylases. VanZ confers low-level resistance to the glycopeptide antibiotic teicoplanin (Te). Analysis of cytoplasmic peptidoglycan precursors, accumulated in the presence of ramoplanin, showed that VanZ-mediated Te resistance does not involve incorporation of a substituent of D-alanine into the peptidoglycan precursors [].
Probab=21.66 E-value=2.7e+02 Score=18.97 Aligned_cols=42 Identities=21% Similarity=0.484 Sum_probs=22.6
Q ss_pred HHHHHHHHHhhhhc--CccChhHhHHHHHHHHHHHHHHHHHHhhh
Q 029264 145 WTWAVLTSCSRVLL--GRHFVSDVLAGACLGVLEAAFVFRFLKVK 187 (196)
Q Consensus 145 ~~~~~~v~~sRvyl--g~H~~sDvl~G~~lG~~~~~l~~~~~~~~ 187 (196)
...+..+=..+... +.=-+.|++.- .+|..++.+.+...++.
T Consensus 86 ~~~sl~iE~~Q~~~~~r~~d~~Dv~~n-~~G~~lG~~l~~~~~~~ 129 (133)
T PF04892_consen 86 FLFSLFIELIQLFLPGRSFDIDDVLAN-TLGALLGYLLYRLIRKR 129 (133)
T ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 34444555666665 45556787653 44555555555544443
No 64
>PRK14740 kdbF potassium-transporting ATPase subunit F; Provisional
Probab=21.62 E-value=1.3e+02 Score=15.28 Aligned_cols=25 Identities=20% Similarity=0.088 Sum_probs=17.2
Q ss_pred hHhHHHHHHHHHHHHHHHHHHhhhh
Q 029264 164 SDVLAGACLGVLEAAFVFRFLKVKT 188 (196)
Q Consensus 164 sDvl~G~~lG~~~~~l~~~~~~~~~ 188 (196)
-|-++|..-..+..++.+.++|.++
T Consensus 4 ~~wls~a~a~~Lf~YLv~ALlRaer 28 (29)
T PRK14740 4 LDWLSLALATGLFVYLLVALLRADR 28 (29)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3567777777777777777776543
No 65
>PF06799 DUF1230: Protein of unknown function (DUF1230); InterPro: IPR009631 This family represents Ycf36, which is found in plants, encoded in the genomes of algal chloroplasts and in cyanobacteria. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=21.03 E-value=1.1e+02 Score=22.13 Aligned_cols=24 Identities=29% Similarity=0.374 Sum_probs=17.7
Q ss_pred HHHHHHHHhhhhcCccChhHhHHH
Q 029264 146 TWAVLTSCSRVLLGRHFVSDVLAG 169 (196)
Q Consensus 146 ~~~~~v~~sRvylg~H~~sDvl~G 169 (196)
........-|+|+|..|..|=+.+
T Consensus 73 ~~~~~l~llRlyLGW~YV~~RL~s 96 (144)
T PF06799_consen 73 LLLLLLVLLRLYLGWSYVGDRLLS 96 (144)
T ss_pred HHHHHHHHHHHHhChHHHHhhhcc
Confidence 344556677999999998886554
Done!