Query 029264
Match_columns 196
No_of_seqs 154 out of 1331
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 16:27:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d2t_A Acid phosphatase; all a 99.9 3.4E-26 1.2E-30 177.7 10.7 165 11-181 35-209 (231)
2 2ipb_A PHON protein, class A n 99.9 1.5E-24 5.2E-29 168.3 11.4 165 11-181 23-197 (230)
3 1qi9_A Protein (vanadium bromo 99.7 1.7E-17 5.9E-22 141.1 8.2 101 85-185 378-510 (556)
4 1up8_A Vanadium-dependent brom 99.5 1.7E-13 5.9E-18 116.9 11.9 78 107-184 477-576 (598)
5 3bb0_A Vanadium chloroperoxida 99.5 2.2E-13 7.4E-18 117.4 10.2 106 71-176 336-511 (609)
6 2l2t_A Receptor tyrosine-prote 53.8 18 0.0006 19.7 3.3 14 176-189 26-39 (44)
7 2ks1_B Epidermal growth factor 53.2 19 0.00065 19.6 3.4 24 166-189 17-40 (44)
8 2ifo_A Inovirus; helical virus 28.6 76 0.0026 17.4 3.3 21 166-186 24-44 (46)
9 3j1z_P YIIP, cation efflux fam 27.9 2.1E+02 0.0071 22.0 8.9 31 156-187 173-203 (306)
10 4b19_A PEPA1; toxin, toxin apo 27.8 23 0.00079 17.5 1.0 22 166-187 7-28 (30)
11 2knc_B Integrin beta-3; transm 24.4 94 0.0032 19.0 3.6 17 166-182 17-33 (79)
No 1
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=99.93 E-value=3.4e-26 Score=177.68 Aligned_cols=165 Identities=19% Similarity=0.079 Sum_probs=112.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHhCCchhHHHHHHHHHH-H-hcchHHHHHHHHHHHH-HH-HHHHH
Q 029264 11 TSFHHRIITLDAAVSKSIHTLFHTSIPGSLLLLLEYSADFRFSFPLALSLYF-T-RVRRPYLIQFLVGLLV-DL-LFVGL 86 (196)
Q Consensus 11 ~~~~~~l~~~D~~i~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~-~i~~~ 86 (196)
|..-+.....|..+..++++.+++...+..+...+..++...+... .++.. + ++++.....++...+. +. +++..
T Consensus 35 P~~~S~~~~~D~~~~~~i~~~~~~~~~~~a~~~~t~~~~~~~~~~~-~~l~~~~~~~~~~~~~~ll~~~~~~a~~~~~~~ 113 (231)
T 1d2t_A 35 PAVGSIAFLNDQAMYEQGRLLRNTERGKLAAEDANLSSGGVANAFS-GAFGSPITEKDAPALHKLLTNMIEDAGDLATRS 113 (231)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCHHHHHHHTH-HHHTSCCSTTTCHHHHHHHHHTHHHHHTTTTHH
T ss_pred cCCCCHHHHHHHHHHHHHhccCCHHHHHHHHHhhccCchhHHHHHH-HHHccccChhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667899999999999986554356777777776654333222 22211 1 2222222222222222 22 67889
Q ss_pred HhhhhcCCCCCCCC---CCCcCC---CCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCc
Q 029264 87 VKSIFRRSRPLYNP---DMKPAV---SVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGR 160 (196)
Q Consensus 87 lK~~~~r~RP~~~~---~~~~~~---~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~ 160 (196)
+|..++|+||.... ...+.. ..+++||||||++.++++++++....+... .....++..+|+||+|+|+
T Consensus 114 lK~~~~r~RP~~~~~~~~~~p~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~-----~~~~~~a~~v~~SRvylGv 188 (231)
T 1d2t_A 114 AKDHYMRIRPFAFYGVSTCNTTEQDKLSKNGSYPSGHTSIGWATALVLAEINPQRQ-----NEILKRGYELGQSRVICGY 188 (231)
T ss_dssp HHHHHCCCCHHHHHTCCCSCC--CCCCCSSCCSSCHHHHHHHHHHHHHHHHCGGGH-----HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhCCCCcCccCCCCceecCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCC
Confidence 99999999998542 222222 466889999999999988888776655432 2346778899999999999
Q ss_pred cChhHhHHHHHHHHHHHHHHH
Q 029264 161 HFVSDVLAGACLGVLEAAFVF 181 (196)
Q Consensus 161 H~~sDvl~G~~lG~~~~~l~~ 181 (196)
||++||++|+++|..++...+
T Consensus 189 H~psDVlaG~~lG~~~~~~~~ 209 (231)
T 1d2t_A 189 HWQSDVDAARVVGSAVVATLH 209 (231)
T ss_dssp SCHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987765
No 2
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=99.91 E-value=1.5e-24 Score=168.29 Aligned_cols=165 Identities=18% Similarity=0.063 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHhCCchhHHHHHHHHHH-H-hcchHHHHHHHHHHHH-HH-HHHHH
Q 029264 11 TSFHHRIITLDAAVSKSIHTLFHTSIPGSLLLLLEYSADFRFSFPLALSLYF-T-RVRRPYLIQFLVGLLV-DL-LFVGL 86 (196)
Q Consensus 11 ~~~~~~l~~~D~~i~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~-~i~~~ 86 (196)
|..-+.....|..+..++++.+++. ..........++.......+...+.. + ++++.....++...+. .. +++..
T Consensus 23 P~~~S~~~~~D~~~~~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ll~~~~~~a~~~~~~~ 101 (230)
T 2ipb_A 23 PGNDDPAFRYDKEAYFKGYAIKGSP-RWKQAAEDADISVENIARIFSPVVGAKINPKDTPETWNMLQNLLKMGGYYATAS 101 (230)
T ss_dssp CCTTSHHHHHHHHHHHHHHTTTTSH-HHHHHHHHHCCSHHHHHHHHHHHHTBCCSTTTCHHHHHHHHHHHHHHHTTTTHH
T ss_pred cCCCCHHHHHHHHHHHHHHhccChH-HHHHHHHHHhcCcchHHHHHHHHhCCcCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445667889999999999988765 22222222223322222222221111 1 3333333333333333 33 68889
Q ss_pred HhhhhcCCCCCCCCCCCcCC------CCCCCCCCchhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhhhhcCc
Q 029264 87 VKSIFRRSRPLYNPDMKPAV------SVDHFSFPSGHASRVFFVASFISLLDDFSGNCWLVLGVWTWAVLTSCSRVLLGR 160 (196)
Q Consensus 87 lK~~~~r~RP~~~~~~~~~~------~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~sRvylg~ 160 (196)
+|..++|+||.......... ...++||||||++.++++++++....+... ..+..++.++++||+|+|+
T Consensus 102 lK~~~~r~RP~~~~~~~~~~~~~~~~~~~~~SFPSGHa~~a~a~a~~l~~~~~~~~-----~~~~~~a~~v~~SRv~~G~ 176 (230)
T 2ipb_A 102 AKKYYMRTRPFVLFNHSTCRPEDENTLRKDGSYPSGHDAYSTLLALVLSQARPERA-----QELARRGWEFGQSRVICGA 176 (230)
T ss_dssp HHHHHCCCCHHHHTTCCCSCGGGHHHHHTSCCSSCHHHHHHHHHHHHHHHHCGGGH-----HHHHHHHHHHHHHHHHHTS
T ss_pred HHHHhCCCCcCccCCCCeeccCcccCCCCCCCcChHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcCc
Confidence 99999999998643221121 356789999999999988887776665432 2245678899999999999
Q ss_pred cChhHhHHHHHHHHHHHHHHH
Q 029264 161 HFVSDVLAGACLGVLEAAFVF 181 (196)
Q Consensus 161 H~~sDvl~G~~lG~~~~~l~~ 181 (196)
||+|||++|+++|..++...+
T Consensus 177 H~~sDVlaG~~lG~~~~~~~~ 197 (230)
T 2ipb_A 177 HWQSDVDAGRYVGAVEFARLQ 197 (230)
T ss_dssp SCHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987765
No 3
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=99.70 E-value=1.7e-17 Score=141.09 Aligned_cols=101 Identities=23% Similarity=0.224 Sum_probs=74.5
Q ss_pred HHHhhhhcCCCCCCC-CCCCcCC-------CCCCCCCCchhHHHHHHHHHHHHHhhhhh----------------hhH--
Q 029264 85 GLVKSIFRRSRPLYN-PDMKPAV-------SVDHFSFPSGHASRVFFVASFISLLDDFS----------------GNC-- 138 (196)
Q Consensus 85 ~~lK~~~~r~RP~~~-~~~~~~~-------~~~~~sfPSgHa~~a~~~~~~~~~~~~~~----------------~~~-- 138 (196)
.++|.+++|+||... ++...+. .+.++||||||++.++++++++..+.... ..+
T Consensus 378 ~lLK~l~~RpRP~~~~~~~~~Ll~~~~~~~tp~~~SFPSGHAt~A~A~A~vL~~l~g~~~~~~~~~~r~~~~~~G~~r~~ 457 (556)
T 1qi9_A 378 ELLKRVAAINAAQNPNNEVTYLLPQAIQEGSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLID 457 (556)
T ss_dssp HHHHHHHHHHHHHSGGGCCCCCCCBSSTTCSCSSCCSSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTTSSSEEE
T ss_pred hHHHhhhccCCCCCCccccceeeecccccCCCCCCCCChHHHHHHHHHHHHHHHHHhccccccccccccccccccccccc
Confidence 589999999999853 3333332 35688999999999998888876554211 000
Q ss_pred ----HHHH--HHHHHHHHHHHhhhhcCccChhHhHHHHHHHHHHHHHHHHHHh
Q 029264 139 ----WLVL--GVWTWAVLTSCSRVLLGRHFVSDVLAGACLGVLEAAFVFRFLK 185 (196)
Q Consensus 139 ----~~~~--~~~~~~~~v~~sRvylg~H~~sDvl~G~~lG~~~~~l~~~~~~ 185 (196)
.+.+ .+..++..+++||+|+|+|||+||++|+++|..++..+.+-.+
T Consensus 458 ~~~~~l~~~~~l~~lA~lIg~SRVYlGVHYPSDVlaG~lLG~~va~~vl~~~~ 510 (556)
T 1qi9_A 458 FRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQEL 510 (556)
T ss_dssp CCSSCCBHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeehhhHHHHHHHHHHHHHHeeCccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111 1445888999999999999999999999999999988776443
No 4
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A
Probab=99.49 E-value=1.7e-13 Score=116.87 Aligned_cols=78 Identities=22% Similarity=0.102 Sum_probs=60.4
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhhhhh----------------------HHHHHHHHHHHHHHHHhhhhcCccChh
Q 029264 107 SVDHFSFPSGHASRVFFVASFISLLDDFSGN----------------------CWLVLGVWTWAVLTSCSRVLLGRHFVS 164 (196)
Q Consensus 107 ~~~~~sfPSgHa~~a~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~v~~sRvylg~H~~s 164 (196)
.+...||||||++.+++.++.+..+.+.... ..+...+..++..+++||+|+|+||++
T Consensus 477 tP~~pSYPSGHAt~S~A~A~vL~~lf~~~~~~~~~~~~~~~G~~R~~p~~g~~ltv~~sl~~lA~eig~SRVYlGVHypS 556 (598)
T 1up8_A 477 SPFHPSYGSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFS 556 (598)
T ss_dssp SCSSCSSSCHHHHHHHHHHHHHHHHBTTTCBCSCCEEECSSSSSEEECCCCSCCBHHHHHHHHHHHHHHHHHHHTSCCHH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhccccccccccccccCcccccccccccchhHHHHHHHHHHHHHHHhheeeeecHH
Confidence 3467899999999999988887665543210 001224567889999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHH
Q 029264 165 DVLAGACLGVLEAAFVFRFL 184 (196)
Q Consensus 165 Dvl~G~~lG~~~~~l~~~~~ 184 (196)
||++|+.+|..++....+-.
T Consensus 557 DVlAG~~LG~aVa~~vl~~~ 576 (598)
T 1up8_A 557 DQFESLLLGEQVAIGILEEQ 576 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887776543
No 5
>3bb0_A Vanadium chloroperoxidase; protein phosphate-intermediate complex, phospatase activity, chloride, metal-binding, oxidoreductase, secreted; 1.50A {Curvularia inaequalis} PDB: 1vns_A 1vnc_A 1vni_A 1idq_A 1vne_A 1vnf_A 1idu_A 1vng_A 1vnh_A
Probab=99.46 E-value=2.2e-13 Score=117.42 Aligned_cols=106 Identities=21% Similarity=0.100 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCCCC-----------CCCCCcCC-----------CCCCCCCCchhHHHHHHHHHHH
Q 029264 71 IQFLVGLLVDLLFVGLVKSIFRRSRPLY-----------NPDMKPAV-----------SVDHFSFPSGHASRVFFVASFI 128 (196)
Q Consensus 71 ~~~~~~~~~~~~i~~~lK~~~~r~RP~~-----------~~~~~~~~-----------~~~~~sfPSgHa~~a~~~~~~~ 128 (196)
..+..++.-+.+.+...|..+.|+||.. .+.+..+. .....||||||++.+++.+.++
T Consensus 336 all~~A~~DA~ia~w~~K~~y~R~RP~taI~~~~~~~~~dp~w~~l~~~~~~~~~~~~tP~~pSYPSGHAt~s~A~A~vL 415 (609)
T 3bb0_A 336 ALVDVACTDAGIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMV 415 (609)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCBCCHHHHHHTCCCTTTCCTTCCBCCBCCTTSSSCCBCCSSCCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhcCCCcCchhhcccccccCCccchhhcccccccccccCCCCCCCCCCHHHHHHHHHHHHH
Confidence 3344555555666777999999999963 22333332 3556899999999999888887
Q ss_pred HHhhh-----------hhhhHH-------------------------------------HHHHHHHHHHHHHHhhhhcCc
Q 029264 129 SLLDD-----------FSGNCW-------------------------------------LVLGVWTWAVLTSCSRVLLGR 160 (196)
Q Consensus 129 ~~~~~-----------~~~~~~-------------------------------------~~~~~~~~~~~v~~sRvylg~ 160 (196)
..+.. ...... -...+..++..+|+||+|.|+
T Consensus 416 ~~~f~~~~~~~~~~G~d~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~r~~~sl~~~A~e~g~SRIY~GV 495 (609)
T 3bb0_A 416 RRYYNGRVGTWKDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVRHFDSAWELMFENAISRIFLGV 495 (609)
T ss_dssp HHHHBTTTBCCCTTSCCCCCEEEEECTTSSSSCEEESSCCCTTSCGGGSCEEECCCCEEEESCHHHHHHHHHHHHHHTTS
T ss_pred HHHHhcccccccccCccccceeecccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHhhhhheeee
Confidence 76652 100000 001234577899999999999
Q ss_pred cChhHhHHHHHHHHHH
Q 029264 161 HFVSDVLAGACLGVLE 176 (196)
Q Consensus 161 H~~sDvl~G~~lG~~~ 176 (196)
||++|+++|..+|..+
T Consensus 496 HypsDv~aG~~lG~~~ 511 (609)
T 3bb0_A 496 HWRFDAAAARDILIPT 511 (609)
T ss_dssp SCHHHHSCHHHHBCBC
T ss_pred eCHHHHHHHHHHHHhh
Confidence 9999999999998655
No 6
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=53.81 E-value=18 Score=19.74 Aligned_cols=14 Identities=14% Similarity=0.176 Sum_probs=6.2
Q ss_pred HHHHHHHHHhhhhh
Q 029264 176 EAAFVFRFLKVKTI 189 (196)
Q Consensus 176 ~~~l~~~~~~~~~~ 189 (196)
++...+.+.|+++.
T Consensus 26 i~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 26 VGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHTTCS
T ss_pred HHHHHHHHhhhhhh
Confidence 34444444555443
No 7
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=53.19 E-value=19 Score=19.60 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=11.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhh
Q 029264 166 VLAGACLGVLEAAFVFRFLKVKTI 189 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~~~~~~~~~ 189 (196)
|++|.+.-.+++...+.+.|+++.
T Consensus 17 VVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHHHHHHHHhhhhHh
Confidence 444444444445455555555544
No 8
>2ifo_A Inovirus; helical virus; NMR {Filamentous phage} SCOP: h.1.4.1
Probab=28.62 E-value=76 Score=17.36 Aligned_cols=21 Identities=24% Similarity=0.529 Sum_probs=15.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhh
Q 029264 166 VLAGACLGVLEAAFVFRFLKV 186 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~~~~~~ 186 (196)
-+++..+|...+.-.+++.|+
T Consensus 24 ~IG~aVLgV~v~i~v~k~IRr 44 (46)
T 2ifo_A 24 AIGGAVLTVMVGIKVYKWVRR 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 366777777777777777665
No 9
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=27.93 E-value=2.1e+02 Score=22.03 Aligned_cols=31 Identities=13% Similarity=0.080 Sum_probs=24.4
Q ss_pred hhcCccChhHhHHHHHHHHHHHHHHHHHHhhh
Q 029264 156 VLLGRHFVSDVLAGACLGVLEAAFVFRFLKVK 187 (196)
Q Consensus 156 vylg~H~~sDvl~G~~lG~~~~~l~~~~~~~~ 187 (196)
.+.|..| -|-++|.++|.++....+.+.+..
T Consensus 173 ~~~g~~~-~Dpi~ai~Ia~~I~~~~~~l~~~s 203 (306)
T 3j1z_P 173 SQYGWWW-ADGLFAVLIACYIGQQAFDLGYRS 203 (306)
T ss_dssp CCSSSCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCcch-hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3556655 599999999999999888876654
No 10
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=27.80 E-value=23 Score=17.51 Aligned_cols=22 Identities=18% Similarity=0.264 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh
Q 029264 166 VLAGACLGVLEAAFVFRFLKVK 187 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~~~~~~~ 187 (196)
+++-.+-|+.++++.+++..++
T Consensus 7 iia~visGcivalF~hWL~~r~ 28 (30)
T 4b19_A 7 IIAPVISGCAIAFFSYWLSRRN 28 (30)
T ss_dssp STTTTHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHhcc
Confidence 3445566777777777766554
No 11
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=24.43 E-value=94 Score=19.00 Aligned_cols=17 Identities=24% Similarity=0.348 Sum_probs=7.2
Q ss_pred hHHHHHHHHHHHHHHHH
Q 029264 166 VLAGACLGVLEAAFVFR 182 (196)
Q Consensus 166 vl~G~~lG~~~~~l~~~ 182 (196)
+++|.++-.++.++.++
T Consensus 17 vi~gilliGllllliwk 33 (79)
T 2knc_B 17 VMGAILLIGLAALLIWK 33 (79)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444433344444444
Done!