Query 029265
Match_columns 196
No_of_seqs 128 out of 1232
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 16:29:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gn3_A Putative protein-disulf 100.0 7.1E-34 2.4E-38 220.8 13.5 145 39-196 6-158 (182)
2 3gmf_A Protein-disulfide isome 100.0 1.4E-31 4.8E-36 211.5 9.4 146 40-196 6-172 (205)
3 3f4s_A Alpha-DSBA1, putative u 100.0 1.2E-30 4.2E-35 209.0 9.5 145 37-196 27-175 (226)
4 3gha_A Disulfide bond formatio 100.0 3.7E-30 1.3E-34 202.8 11.4 149 36-196 16-167 (202)
5 3bci_A Disulfide bond protein 100.0 4.8E-28 1.6E-32 187.4 13.0 143 41-196 3-153 (186)
6 3gyk_A 27KDA outer membrane pr 99.9 3.9E-27 1.3E-31 180.3 13.3 138 38-196 11-148 (175)
7 4dvc_A Thiol:disulfide interch 99.9 8.3E-27 2.8E-31 178.9 12.1 141 43-196 14-154 (184)
8 3h93_A Thiol:disulfide interch 99.9 6.4E-25 2.2E-29 170.5 11.6 134 50-196 23-156 (192)
9 2rem_A Disulfide oxidoreductas 99.9 2.2E-24 7.4E-29 167.2 13.1 136 51-196 24-159 (193)
10 2znm_A Thiol:disulfide interch 99.9 2.1E-24 7.1E-29 167.7 11.7 134 50-196 20-154 (195)
11 3hz8_A Thiol:disulfide interch 99.9 1.6E-24 5.4E-29 169.2 10.5 134 50-196 22-158 (193)
12 3l9s_A Thiol:disulfide interch 99.9 2.5E-24 8.5E-29 168.0 11.5 132 52-196 21-155 (191)
13 1z6m_A Conserved hypothetical 99.9 6.7E-24 2.3E-28 162.3 11.1 136 37-196 15-153 (175)
14 3l9v_A Putative thiol-disulfid 99.9 9.5E-24 3.3E-28 164.2 10.4 132 52-196 14-149 (189)
15 3hd5_A Thiol:disulfide interch 99.9 1.8E-23 6.2E-28 162.6 10.2 133 50-196 23-155 (195)
16 3feu_A Putative lipoprotein; a 99.9 1.2E-23 4.1E-28 163.3 7.8 133 52-196 22-156 (185)
17 3c7m_A Thiol:disulfide interch 99.9 4.4E-22 1.5E-26 154.1 9.3 144 42-196 8-166 (195)
18 2in3_A Hypothetical protein; D 99.9 2E-21 7E-26 153.0 12.5 136 52-196 6-180 (216)
19 3kzq_A Putative uncharacterize 99.8 2.3E-20 7.8E-25 146.8 13.7 132 54-196 3-173 (208)
20 1r4w_A Glutathione S-transfera 99.8 1.2E-19 4.1E-24 144.6 12.8 135 52-196 4-186 (226)
21 2imf_A HCCA isomerase, 2-hydro 99.8 2.9E-20 1E-24 145.7 6.7 130 54-196 1-171 (203)
22 3fz5_A Possible 2-hydroxychrom 99.8 3.3E-18 1.1E-22 134.1 10.7 134 52-196 3-177 (202)
23 1v58_A Thiol:disulfide interch 99.7 4.3E-18 1.5E-22 137.1 9.9 117 39-196 87-203 (241)
24 3gv1_A Disulfide interchange p 99.7 9.5E-19 3.2E-23 131.1 5.0 107 41-196 6-113 (147)
25 3gl5_A Putative DSBA oxidoredu 99.7 2.8E-16 9.5E-21 126.4 13.2 135 52-196 1-187 (239)
26 3rpp_A Glutathione S-transfera 99.7 7.8E-16 2.7E-20 123.4 11.9 135 52-196 4-186 (234)
27 1t3b_A Thiol:disulfide interch 99.5 8E-14 2.7E-18 109.9 9.9 107 41-196 78-185 (211)
28 1eej_A Thiol:disulfide interch 99.5 5.2E-14 1.8E-18 111.2 6.9 78 40-127 77-155 (216)
29 3tdg_A DSBG, putative uncharac 99.4 3.1E-12 1E-16 104.2 9.7 108 51-196 146-260 (273)
30 1un2_A DSBA, thiol-disulfide i 99.3 2.5E-12 8.4E-17 100.4 5.5 75 52-128 113-190 (197)
31 1fo5_A Thioredoxin; disulfide 97.7 5.8E-05 2E-09 49.1 4.8 40 53-92 3-42 (85)
32 1nho_A Probable thioredoxin; b 97.5 4.6E-05 1.6E-09 49.6 2.9 39 54-92 3-41 (85)
33 2trx_A Thioredoxin; electron t 97.3 0.00055 1.9E-08 46.4 6.0 41 52-92 20-60 (108)
34 2i4a_A Thioredoxin; acidophIle 97.3 0.00057 1.9E-08 46.1 5.9 41 52-92 20-60 (107)
35 3die_A Thioredoxin, TRX; elect 97.2 0.00048 1.7E-08 46.3 5.1 41 52-92 19-59 (106)
36 1thx_A Thioredoxin, thioredoxi 97.2 0.0005 1.7E-08 47.0 5.2 41 52-92 25-65 (115)
37 1nsw_A Thioredoxin, TRX; therm 97.2 0.00055 1.9E-08 46.1 5.3 41 52-92 17-57 (105)
38 1dby_A Chloroplast thioredoxin 97.2 0.00062 2.1E-08 46.0 5.4 41 52-92 19-59 (107)
39 1t00_A Thioredoxin, TRX; redox 97.1 0.0007 2.4E-08 46.2 5.4 41 52-92 23-63 (112)
40 3gnj_A Thioredoxin domain prot 97.1 0.00067 2.3E-08 46.1 5.1 41 52-92 22-62 (111)
41 3tco_A Thioredoxin (TRXA-1); d 97.1 0.0007 2.4E-08 45.7 5.1 41 52-92 21-61 (109)
42 2o8v_B Thioredoxin 1; disulfid 97.1 0.00096 3.3E-08 47.3 5.9 41 52-92 40-80 (128)
43 2yzu_A Thioredoxin; redox prot 97.1 0.00082 2.8E-08 45.2 5.2 41 52-92 18-58 (109)
44 1fb6_A Thioredoxin M; electron 97.1 0.00093 3.2E-08 44.8 5.4 40 52-91 18-57 (105)
45 1xwb_A Thioredoxin; dimerizati 97.0 0.0013 4.4E-08 44.2 5.8 41 52-92 20-60 (106)
46 1ep7_A Thioredoxin CH1, H-type 97.0 0.00085 2.9E-08 45.7 4.9 41 52-92 24-64 (112)
47 3hxs_A Thioredoxin, TRXP; elec 97.0 0.00088 3E-08 47.8 5.1 41 52-92 51-91 (141)
48 1w4v_A Thioredoxin, mitochondr 97.0 0.0011 3.6E-08 46.2 5.2 41 52-92 31-71 (119)
49 2l57_A Uncharacterized protein 97.0 0.001 3.6E-08 46.5 5.2 42 52-93 26-67 (126)
50 2i1u_A Thioredoxin, TRX, MPT46 97.0 0.0012 4.1E-08 45.6 5.4 41 52-92 30-70 (121)
51 2voc_A Thioredoxin; electron t 97.0 0.0012 4.3E-08 45.2 5.3 41 52-92 17-57 (112)
52 3aps_A DNAJ homolog subfamily 96.9 0.0012 4.3E-08 45.7 5.3 41 52-92 21-61 (122)
53 2dml_A Protein disulfide-isome 96.9 0.0012 4E-08 46.4 5.2 40 52-91 35-74 (130)
54 2b5x_A YKUV protein, TRXY; thi 96.9 0.0011 3.7E-08 47.1 5.0 42 52-93 29-70 (148)
55 3ul3_B Thioredoxin, thioredoxi 96.9 0.0013 4.5E-08 46.3 5.2 42 51-92 41-82 (128)
56 2l5l_A Thioredoxin; structural 96.9 0.0014 4.7E-08 46.8 5.3 41 52-92 38-78 (136)
57 3hz4_A Thioredoxin; NYSGXRC, P 96.8 0.0016 5.3E-08 46.8 5.1 41 52-92 24-64 (140)
58 2e0q_A Thioredoxin; electron t 96.8 0.0018 6.3E-08 43.0 5.0 40 52-92 16-55 (104)
59 3m9j_A Thioredoxin; oxidoreduc 96.8 0.002 6.8E-08 43.2 5.0 39 52-91 20-58 (105)
60 3ha9_A Uncharacterized thiored 96.7 0.0023 8E-08 46.7 5.6 39 52-91 37-75 (165)
61 2ppt_A Thioredoxin-2; thiredox 96.7 0.0021 7.2E-08 47.2 5.3 42 51-92 63-104 (155)
62 1x5d_A Protein disulfide-isome 96.7 0.0023 7.9E-08 44.9 5.1 41 52-92 25-69 (133)
63 2vlu_A Thioredoxin, thioredoxi 96.7 0.0023 7.9E-08 44.3 5.0 39 52-91 34-72 (122)
64 1gh2_A Thioredoxin-like protei 96.7 0.0026 8.8E-08 43.0 5.0 40 52-92 21-60 (107)
65 1ti3_A Thioredoxin H, PTTRXH1; 96.7 0.0036 1.2E-07 42.5 5.7 40 52-92 26-65 (113)
66 1zma_A Bacterocin transport ac 96.6 0.0022 7.6E-08 44.3 4.5 36 52-87 29-64 (118)
67 1wou_A Thioredoxin -related pr 96.6 0.0032 1.1E-07 44.1 5.3 41 52-92 24-71 (123)
68 2djj_A PDI, protein disulfide- 96.6 0.003 1E-07 43.6 5.0 41 52-92 25-70 (121)
69 2oe3_A Thioredoxin-3; electron 96.6 0.0032 1.1E-07 43.5 5.1 39 52-91 30-68 (114)
70 1syr_A Thioredoxin; SGPP, stru 96.6 0.0033 1.1E-07 43.0 5.1 39 52-91 26-64 (112)
71 3erw_A Sporulation thiol-disul 96.6 0.0042 1.5E-07 43.8 5.8 42 51-92 33-75 (145)
72 4euy_A Uncharacterized protein 96.6 0.0038 1.3E-07 42.1 5.2 40 52-92 18-57 (105)
73 1v98_A Thioredoxin; oxidoreduc 96.5 0.0039 1.3E-07 44.5 5.5 38 55-92 53-90 (140)
74 3p2a_A Thioredoxin 2, putative 96.5 0.0036 1.2E-07 45.1 5.3 42 51-92 54-95 (148)
75 3f3q_A Thioredoxin-1; His TAG, 96.5 0.0037 1.3E-07 42.7 5.1 40 51-91 23-62 (109)
76 3qfa_C Thioredoxin; protein-pr 96.5 0.0031 1.1E-07 43.7 4.7 40 52-92 31-70 (116)
77 2pu9_C TRX-F, thioredoxin F-ty 96.5 0.0037 1.3E-07 42.5 5.0 40 52-92 24-63 (111)
78 2dj3_A Protein disulfide-isome 96.5 0.0039 1.3E-07 43.8 5.3 40 52-91 25-66 (133)
79 1zzo_A RV1677; thioredoxin fol 96.5 0.0035 1.2E-07 43.6 4.9 40 52-92 25-64 (136)
80 1xfl_A Thioredoxin H1; AT3G510 96.5 0.005 1.7E-07 43.2 5.6 40 52-92 38-77 (124)
81 2yj7_A LPBCA thioredoxin; oxid 95.5 0.00044 1.5E-08 46.3 0.0 39 52-90 19-57 (106)
82 2vim_A Thioredoxin, TRX; thior 96.4 0.0044 1.5E-07 41.2 4.9 40 52-92 19-58 (104)
83 2f51_A Thioredoxin; electron t 96.4 0.0046 1.6E-07 42.9 4.9 40 52-92 23-62 (118)
84 1faa_A Thioredoxin F; electron 96.4 0.0047 1.6E-07 42.8 5.0 40 52-92 37-76 (124)
85 1r26_A Thioredoxin; redox-acti 96.4 0.0045 1.5E-07 43.7 4.9 40 52-92 37-76 (125)
86 4evm_A Thioredoxin family prot 96.4 0.015 5.3E-07 40.1 7.7 42 52-93 22-63 (138)
87 2dj1_A Protein disulfide-isome 96.4 0.0035 1.2E-07 44.5 4.4 40 52-91 34-76 (140)
88 2vm1_A Thioredoxin, thioredoxi 96.4 0.0045 1.5E-07 42.3 4.8 40 52-92 28-67 (118)
89 1ilo_A Conserved hypothetical 96.4 0.0052 1.8E-07 38.8 4.7 36 55-91 3-38 (77)
90 1lu4_A Soluble secreted antige 96.3 0.0054 1.9E-07 42.8 5.0 39 52-91 24-62 (136)
91 3d6i_A Monothiol glutaredoxin- 96.3 0.0047 1.6E-07 42.0 4.3 41 52-92 21-62 (112)
92 3or5_A Thiol:disulfide interch 96.3 0.0075 2.6E-07 43.7 5.7 41 52-92 34-75 (165)
93 2lja_A Putative thiol-disulfid 96.3 0.0085 2.9E-07 42.8 5.9 42 51-92 29-71 (152)
94 2l5o_A Putative thioredoxin; s 96.2 0.0057 2E-07 43.8 4.9 41 52-92 28-69 (153)
95 1qgv_A Spliceosomal protein U5 96.2 0.0084 2.9E-07 43.3 5.8 41 52-92 23-63 (142)
96 2f9s_A Thiol-disulfide oxidore 96.2 0.0066 2.2E-07 43.5 5.1 41 52-92 26-67 (151)
97 3dxb_A Thioredoxin N-terminall 96.2 0.007 2.4E-07 46.9 5.4 42 51-92 29-70 (222)
98 1ego_A Glutaredoxin; electron 96.2 0.0061 2.1E-07 39.4 4.2 37 55-92 2-38 (85)
99 2wz9_A Glutaredoxin-3; protein 96.1 0.0069 2.4E-07 44.0 4.9 40 52-92 32-71 (153)
100 3gl3_A Putative thiol:disulfid 96.1 0.0078 2.7E-07 43.0 5.1 41 51-91 27-68 (152)
101 2l6c_A Thioredoxin; oxidoreduc 96.1 0.0056 1.9E-07 41.8 4.0 40 52-92 19-58 (110)
102 2xc2_A Thioredoxinn; oxidoredu 96.1 0.0067 2.3E-07 41.7 4.4 38 52-91 33-70 (117)
103 2j23_A Thioredoxin; immune pro 96.1 0.0033 1.1E-07 43.8 2.7 40 52-91 33-73 (121)
104 3uvt_A Thioredoxin domain-cont 96.0 0.01 3.4E-07 39.9 5.1 40 52-91 21-63 (111)
105 2k8s_A Thioredoxin; dimer, str 96.0 0.0032 1.1E-07 40.7 2.4 36 55-92 3-38 (80)
106 3fkf_A Thiol-disulfide oxidore 96.0 0.0065 2.2E-07 43.0 4.3 42 51-92 32-75 (148)
107 2h30_A Thioredoxin, peptide me 96.0 0.0069 2.4E-07 43.9 4.5 43 51-93 37-80 (164)
108 2lrn_A Thiol:disulfide interch 96.0 0.011 3.9E-07 42.4 5.6 41 52-92 29-70 (152)
109 3qou_A Protein YBBN; thioredox 96.0 0.0071 2.4E-07 48.4 4.9 40 52-91 26-65 (287)
110 3hcz_A Possible thiol-disulfid 96.0 0.0058 2E-07 43.3 3.7 42 51-92 30-72 (148)
111 3gix_A Thioredoxin-like protei 95.9 0.013 4.3E-07 42.7 5.5 41 52-92 23-63 (149)
112 2cvb_A Probable thiol-disulfid 95.9 0.014 4.8E-07 43.5 5.8 41 52-92 33-73 (188)
113 3lor_A Thiol-disulfide isomera 95.9 0.014 4.9E-07 42.0 5.7 42 52-93 30-73 (160)
114 3d22_A TRXH4, thioredoxin H-ty 95.9 0.01 3.5E-07 42.0 4.8 40 52-92 46-85 (139)
115 3kcm_A Thioredoxin family prot 95.9 0.016 5.5E-07 41.4 5.9 40 52-91 28-68 (154)
116 1mek_A Protein disulfide isome 95.8 0.0077 2.6E-07 41.0 3.8 40 52-91 24-66 (120)
117 1x5e_A Thioredoxin domain cont 95.8 0.0086 2.9E-07 41.7 4.1 37 55-91 25-62 (126)
118 3apq_A DNAJ homolog subfamily 95.8 0.011 3.8E-07 45.3 4.9 41 52-92 114-154 (210)
119 1o73_A Tryparedoxin; electron 95.8 0.019 6.5E-07 40.6 5.7 40 52-91 28-69 (144)
120 2ywm_A Glutaredoxin-like prote 95.8 0.016 5.6E-07 44.6 5.8 41 51-92 135-175 (229)
121 1i5g_A Tryparedoxin II; electr 95.7 0.02 6.8E-07 40.6 5.8 40 52-91 28-69 (144)
122 2dj0_A Thioredoxin-related tra 95.7 0.012 4E-07 41.7 4.3 40 52-91 26-66 (137)
123 3fk8_A Disulphide isomerase; A 95.6 0.0069 2.4E-07 42.6 2.9 41 52-92 29-71 (133)
124 1a8l_A Protein disulfide oxido 95.6 0.016 5.5E-07 44.4 5.2 39 52-91 22-61 (226)
125 1kng_A Thiol:disulfide interch 95.6 0.0099 3.4E-07 42.6 3.7 39 52-92 42-80 (156)
126 1o8x_A Tryparedoxin, TRYX, TXN 95.6 0.024 8.1E-07 40.4 5.7 40 52-91 28-69 (146)
127 2dbc_A PDCL2, unnamed protein 95.6 0.023 7.9E-07 40.4 5.6 39 52-91 30-68 (135)
128 1a8l_A Protein disulfide oxido 95.6 0.016 5.6E-07 44.4 5.1 41 52-92 134-178 (226)
129 1wmj_A Thioredoxin H-type; str 95.5 0.0045 1.5E-07 43.2 1.7 39 52-91 36-74 (130)
130 3raz_A Thioredoxin-related pro 95.5 0.026 8.7E-07 40.4 5.7 41 52-92 24-65 (151)
131 3hdc_A Thioredoxin family prot 95.4 0.028 9.6E-07 40.6 5.8 40 52-91 41-81 (158)
132 3s9f_A Tryparedoxin; thioredox 95.4 0.028 9.7E-07 41.2 5.8 40 52-91 48-89 (165)
133 2djk_A PDI, protein disulfide- 95.3 0.016 5.6E-07 41.1 4.0 38 54-92 25-62 (133)
134 3h79_A Thioredoxin-like protei 95.3 0.028 9.4E-07 39.2 5.1 41 52-92 33-78 (127)
135 3q6o_A Sulfhydryl oxidase 1; p 95.3 0.024 8.3E-07 44.3 5.3 41 52-92 30-73 (244)
136 3eyt_A Uncharacterized protein 95.2 0.037 1.3E-06 39.7 5.7 42 52-93 28-71 (158)
137 2av4_A Thioredoxin-like protei 95.1 0.042 1.4E-06 40.9 5.8 41 52-92 41-81 (160)
138 2lst_A Thioredoxin; structural 94.1 0.0037 1.3E-07 43.8 0.0 39 52-90 19-60 (130)
139 3evi_A Phosducin-like protein 95.0 0.031 1.1E-06 39.2 4.7 38 53-91 24-61 (118)
140 2b1k_A Thiol:disulfide interch 95.0 0.025 8.6E-07 41.2 4.4 39 51-92 50-88 (168)
141 3cxg_A Putative thioredoxin; m 94.9 0.022 7.5E-07 40.3 3.8 38 52-91 40-77 (133)
142 2qgv_A Hydrogenase-1 operon pr 94.9 0.025 8.7E-07 41.2 4.0 40 52-91 35-76 (140)
143 3ia1_A THIO-disulfide isomeras 94.8 0.029 1E-06 40.0 4.2 38 53-92 31-68 (154)
144 3lwa_A Secreted thiol-disulfid 94.7 0.029 9.9E-07 41.5 4.1 40 52-91 59-105 (183)
145 2hls_A Protein disulfide oxido 94.7 0.033 1.1E-06 43.9 4.6 41 52-92 138-182 (243)
146 2lrt_A Uncharacterized protein 94.6 0.043 1.5E-06 39.5 4.7 40 52-91 35-75 (152)
147 4fo5_A Thioredoxin-like protei 94.5 0.066 2.2E-06 37.8 5.5 41 51-91 31-72 (143)
148 1jfu_A Thiol:disulfide interch 94.5 0.073 2.5E-06 39.4 5.8 41 52-92 60-101 (186)
149 2fwh_A Thiol:disulfide interch 94.5 0.045 1.5E-06 38.6 4.4 40 52-92 31-73 (134)
150 3ewl_A Uncharacterized conserv 94.4 0.037 1.3E-06 38.9 3.9 41 51-91 26-70 (142)
151 1oaz_A Thioredoxin 1; immune s 94.4 0.018 6.2E-07 40.3 2.1 41 52-92 21-75 (123)
152 3emx_A Thioredoxin; structural 94.3 0.03 1E-06 39.6 3.3 37 54-92 33-69 (135)
153 3ed3_A Protein disulfide-isome 94.3 0.054 1.9E-06 44.0 5.1 41 52-92 35-75 (298)
154 2ywi_A Hypothetical conserved 94.2 0.052 1.8E-06 40.5 4.5 39 54-92 48-87 (196)
155 3eur_A Uncharacterized protein 94.2 0.066 2.3E-06 37.7 4.8 40 52-91 31-74 (142)
156 3uem_A Protein disulfide-isome 94.2 0.079 2.7E-06 43.7 6.0 41 51-91 266-308 (361)
157 2trc_P Phosducin, MEKA, PP33; 94.1 0.057 2E-06 41.9 4.8 39 52-91 120-158 (217)
158 1a0r_P Phosducin, MEKA, PP33; 94.1 0.071 2.4E-06 42.3 5.2 39 52-91 133-171 (245)
159 1z6n_A Hypothetical protein PA 94.0 0.092 3.2E-06 39.0 5.4 39 52-91 54-92 (167)
160 2p5q_A Glutathione peroxidase 94.0 0.077 2.6E-06 38.4 4.9 41 52-92 32-73 (170)
161 3idv_A Protein disulfide-isome 93.9 0.053 1.8E-06 41.7 4.2 40 52-91 32-74 (241)
162 3zzx_A Thioredoxin; oxidoreduc 93.9 0.11 3.8E-06 35.3 5.3 39 52-91 20-58 (105)
163 2p31_A CL683, glutathione pero 93.7 0.08 2.7E-06 39.3 4.7 41 52-92 49-90 (181)
164 2es7_A Q8ZP25_salty, putative 93.6 0.055 1.9E-06 39.1 3.4 35 55-90 37-75 (142)
165 2v1m_A Glutathione peroxidase; 93.6 0.098 3.4E-06 37.7 4.9 41 52-92 31-72 (169)
166 3u5r_E Uncharacterized protein 93.5 0.13 4.4E-06 39.5 5.8 40 53-92 60-100 (218)
167 2kuc_A Putative disulphide-iso 93.5 0.032 1.1E-06 38.8 2.1 37 52-88 27-66 (130)
168 2fgx_A Putative thioredoxin; N 93.5 0.054 1.8E-06 37.5 3.2 38 53-92 29-66 (107)
169 3fw2_A Thiol-disulfide oxidore 93.3 0.14 4.9E-06 36.3 5.4 41 52-92 33-77 (150)
170 2jsy_A Probable thiol peroxida 93.3 0.12 4E-06 37.6 4.9 40 52-92 44-84 (167)
171 2vup_A Glutathione peroxidase- 93.2 0.093 3.2E-06 39.2 4.3 41 52-92 48-89 (190)
172 2obi_A PHGPX, GPX-4, phospholi 93.1 0.11 3.8E-06 38.4 4.7 41 52-92 47-88 (183)
173 2ggt_A SCO1 protein homolog, m 93.1 0.083 2.8E-06 38.0 3.8 41 52-92 23-69 (164)
174 3kij_A Probable glutathione pe 93.1 0.15 5E-06 37.7 5.3 41 51-91 37-78 (180)
175 3idv_A Protein disulfide-isome 93.1 0.094 3.2E-06 40.3 4.3 41 52-92 147-190 (241)
176 2k6v_A Putative cytochrome C o 93.0 0.15 5E-06 36.9 5.1 41 52-92 35-80 (172)
177 2ju5_A Thioredoxin disulfide i 93.0 0.063 2.2E-06 38.9 3.0 41 52-92 47-91 (154)
178 2rli_A SCO2 protein homolog, m 92.9 0.13 4.4E-06 37.2 4.7 41 52-92 26-72 (171)
179 2r2j_A Thioredoxin domain-cont 92.8 0.15 5.2E-06 42.6 5.5 40 52-91 22-67 (382)
180 3ga4_A Dolichyl-diphosphooligo 92.8 0.16 5.6E-06 38.3 5.1 31 62-92 54-89 (178)
181 2b5e_A Protein disulfide-isome 92.6 0.16 5.4E-06 43.9 5.5 40 52-91 31-71 (504)
182 3drn_A Peroxiredoxin, bacterio 92.5 0.13 4.6E-06 37.1 4.2 40 52-91 28-70 (161)
183 3f8u_A Protein disulfide-isome 92.4 0.15 5E-06 43.8 5.0 40 52-91 21-60 (481)
184 1hyu_A AHPF, alkyl hydroperoxi 92.4 0.16 5.4E-06 44.4 5.3 40 51-91 116-155 (521)
185 2hyx_A Protein DIPZ; thioredox 92.3 0.17 5.9E-06 42.2 5.1 41 52-92 82-123 (352)
186 2gs3_A PHGPX, GPX-4, phospholi 92.2 0.17 5.9E-06 37.5 4.7 41 52-92 49-90 (185)
187 3cmi_A Peroxiredoxin HYR1; thi 92.2 0.13 4.6E-06 37.5 3.9 40 52-92 32-72 (171)
188 3dwv_A Glutathione peroxidase- 92.1 0.13 4.4E-06 38.4 3.8 41 52-92 46-87 (187)
189 2qsi_A Putative hydrogenase ex 92.1 0.26 8.9E-06 35.6 5.2 38 54-91 35-74 (137)
190 3uem_A Protein disulfide-isome 92.0 0.18 6.1E-06 41.5 4.9 40 52-91 135-174 (361)
191 2hls_A Protein disulfide oxido 92.0 0.25 8.5E-06 38.7 5.5 41 51-91 25-71 (243)
192 3kh7_A Thiol:disulfide interch 91.8 0.21 7.1E-06 36.8 4.6 37 52-91 58-94 (176)
193 2f8a_A Glutathione peroxidase 91.6 0.22 7.7E-06 38.0 4.8 41 52-92 47-88 (208)
194 2lus_A Thioredoxion; CR-Trp16, 90.9 0.034 1.2E-06 39.0 0.0 39 52-90 25-67 (143)
195 3kp8_A Vkorc1/thioredoxin doma 91.4 0.032 1.1E-06 38.2 -0.3 30 53-82 13-42 (106)
196 3msz_A Glutaredoxin 1; alpha-b 91.4 0.11 3.8E-06 33.4 2.4 24 53-76 3-26 (89)
197 2ywm_A Glutaredoxin-like prote 91.2 0.23 7.8E-06 38.0 4.5 39 52-90 21-65 (229)
198 1xvw_A Hypothetical protein RV 91.2 0.26 8.9E-06 35.2 4.6 40 52-91 35-77 (160)
199 3f8u_A Protein disulfide-isome 91.2 0.29 1E-05 41.9 5.6 42 51-92 369-412 (481)
200 3qmx_A Glutaredoxin A, glutare 91.0 0.16 5.3E-06 34.3 3.0 26 52-77 14-39 (99)
201 1sen_A Thioredoxin-like protei 90.7 0.05 1.7E-06 40.0 0.2 39 52-90 46-84 (164)
202 2bmx_A Alkyl hydroperoxidase C 90.7 0.21 7.1E-06 37.4 3.7 40 52-91 45-86 (195)
203 1h75_A Glutaredoxin-like prote 90.4 0.15 5E-06 32.3 2.3 32 55-92 2-33 (81)
204 1wjk_A C330018D20RIK protein; 90.3 0.098 3.3E-06 35.2 1.4 38 52-93 15-52 (100)
205 3nzn_A Glutaredoxin; structura 90.2 0.18 6.2E-06 33.9 2.7 26 52-77 20-45 (103)
206 3ic4_A Glutaredoxin (GRX-1); s 90.1 0.11 3.7E-06 33.9 1.5 23 55-77 13-35 (92)
207 3kp9_A Vkorc1/thioredoxin doma 90.0 0.049 1.7E-06 44.5 -0.4 27 55-81 200-226 (291)
208 3apo_A DNAJ homolog subfamily 90.0 0.33 1.1E-05 44.3 5.1 41 51-91 132-172 (780)
209 3c1r_A Glutaredoxin-1; oxidize 90.0 0.24 8.2E-06 34.3 3.3 35 55-92 26-61 (118)
210 3apo_A DNAJ homolog subfamily 89.9 0.36 1.2E-05 44.0 5.3 41 52-92 675-715 (780)
211 1xzo_A BSSCO, hypothetical pro 89.9 0.2 6.8E-06 36.3 2.9 40 52-91 33-76 (174)
212 1fov_A Glutaredoxin 3, GRX3; a 89.9 0.18 6.3E-06 31.8 2.4 32 55-92 2-33 (82)
213 3t58_A Sulfhydryl oxidase 1; o 89.7 0.4 1.4E-05 42.1 5.1 41 52-92 30-73 (519)
214 1r7h_A NRDH-redoxin; thioredox 89.6 0.19 6.5E-06 31.1 2.3 32 55-92 2-33 (75)
215 1kte_A Thioltransferase; redox 89.6 0.15 5.2E-06 34.1 1.9 35 55-92 13-47 (105)
216 2klx_A Glutaredoxin; thioredox 89.6 0.25 8.7E-06 32.0 3.0 23 54-76 6-28 (89)
217 1we0_A Alkyl hydroperoxide red 89.5 0.26 9E-06 36.5 3.4 40 52-91 31-72 (187)
218 3f9u_A Putative exported cytoc 89.4 0.23 8E-06 36.2 3.0 40 52-91 47-89 (172)
219 1zof_A Alkyl hydroperoxide-red 89.3 0.25 8.6E-06 37.0 3.2 40 52-91 33-74 (198)
220 2khp_A Glutaredoxin; thioredox 88.9 0.31 1E-05 31.7 3.0 33 54-92 6-38 (92)
221 2e7p_A Glutaredoxin; thioredox 88.8 0.18 6.1E-06 34.2 1.8 24 56-79 22-45 (116)
222 1ttz_A Conserved hypothetical 88.7 0.099 3.4E-06 34.5 0.4 26 55-80 2-27 (87)
223 3gkn_A Bacterioferritin comigr 88.7 0.34 1.2E-05 34.8 3.4 40 52-91 35-76 (163)
224 2ls5_A Uncharacterized protein 88.3 0.085 2.9E-06 37.9 0.0 39 52-90 33-74 (159)
225 1qmv_A Human thioredoxin perox 88.3 0.49 1.7E-05 35.4 4.2 40 52-91 34-75 (197)
226 2yzh_A Probable thiol peroxida 88.3 0.56 1.9E-05 34.1 4.4 39 52-91 47-86 (171)
227 2axo_A Hypothetical protein AT 88.0 0.42 1.4E-05 38.5 3.7 38 52-90 42-79 (270)
228 3ztl_A Thioredoxin peroxidase; 87.7 0.53 1.8E-05 36.2 4.1 40 52-91 69-110 (222)
229 3iv4_A Putative oxidoreductase 87.0 0.74 2.5E-05 32.0 4.1 39 52-92 24-62 (112)
230 4f9z_D Endoplasmic reticulum r 87.0 0.85 2.9E-05 35.0 4.9 41 52-92 131-171 (227)
231 1uul_A Tryparedoxin peroxidase 87.0 0.6 2.1E-05 35.0 4.0 40 52-91 36-77 (202)
232 2lqo_A Putative glutaredoxin R 86.9 0.32 1.1E-05 32.5 2.1 32 55-92 5-36 (92)
233 3rhb_A ATGRXC5, glutaredoxin-C 86.8 0.37 1.3E-05 32.8 2.5 21 56-76 21-41 (113)
234 1q98_A Thiol peroxidase, TPX; 86.8 0.84 2.9E-05 33.0 4.6 39 52-91 43-82 (165)
235 2b5e_A Protein disulfide-isome 86.7 0.51 1.7E-05 40.7 3.9 40 52-91 376-418 (504)
236 1aba_A Glutaredoxin; electron 86.5 0.38 1.3E-05 31.1 2.3 31 56-92 2-36 (87)
237 2yan_A Glutaredoxin-3; oxidore 86.4 0.39 1.3E-05 32.3 2.4 31 56-92 19-54 (105)
238 2hze_A Glutaredoxin-1; thiored 86.1 0.25 8.7E-06 33.8 1.3 23 54-76 19-41 (114)
239 3dml_A Putative uncharacterize 86.0 0.37 1.3E-05 33.7 2.1 27 50-76 16-42 (116)
240 2ct6_A SH3 domain-binding glut 86.0 0.51 1.7E-05 32.3 2.8 39 52-92 6-46 (111)
241 2b7k_A SCO1 protein; metalloch 86.0 1 3.5E-05 33.8 4.8 41 52-92 41-86 (200)
242 1psq_A Probable thiol peroxida 85.9 0.99 3.4E-05 32.5 4.6 39 52-91 42-81 (163)
243 3ctg_A Glutaredoxin-2; reduced 85.7 0.72 2.5E-05 32.5 3.6 35 55-92 38-73 (129)
244 2h01_A 2-Cys peroxiredoxin; th 85.6 0.65 2.2E-05 34.5 3.5 40 52-91 31-72 (192)
245 3h8q_A Thioredoxin reductase 3 85.4 0.41 1.4E-05 32.8 2.1 22 55-76 18-39 (114)
246 2cq9_A GLRX2 protein, glutared 85.4 0.46 1.6E-05 33.4 2.4 22 56-77 29-50 (130)
247 1xvq_A Thiol peroxidase; thior 85.4 0.91 3.1E-05 33.2 4.2 38 52-91 44-82 (175)
248 2i3y_A Epididymal secretory gl 85.3 0.99 3.4E-05 34.7 4.5 39 52-91 56-95 (215)
249 3qcp_A QSOX from trypanosoma b 85.2 1 3.4E-05 39.2 4.9 40 52-91 42-89 (470)
250 1wik_A Thioredoxin-like protei 85.0 0.44 1.5E-05 32.4 2.1 32 55-92 16-52 (109)
251 2ht9_A Glutaredoxin-2; thiored 84.7 0.55 1.9E-05 33.9 2.6 23 55-77 50-72 (146)
252 1zye_A Thioredoxin-dependent p 84.5 1.1 3.7E-05 34.3 4.4 40 52-91 56-97 (220)
253 2i81_A 2-Cys peroxiredoxin; st 84.3 0.98 3.4E-05 34.4 4.1 40 52-91 52-93 (213)
254 2r37_A Glutathione peroxidase 83.5 1.1 3.7E-05 34.2 4.0 39 52-91 38-77 (207)
255 3mjh_B Early endosome antigen 82.9 0.25 8.4E-06 26.9 0.0 20 62-81 6-25 (34)
256 2g2q_A Glutaredoxin-2; thiored 82.5 0.54 1.9E-05 32.9 1.7 66 53-130 2-67 (124)
257 3zyw_A Glutaredoxin-3; metal b 81.9 0.68 2.3E-05 31.8 2.0 32 55-92 17-53 (111)
258 3ipz_A Monothiol glutaredoxin- 80.8 0.79 2.7E-05 31.2 2.0 32 55-92 19-55 (109)
259 3l4n_A Monothiol glutaredoxin- 80.5 0.96 3.3E-05 31.9 2.5 22 55-76 15-36 (127)
260 2c0d_A Thioredoxin peroxidase 80.3 1.5 5.2E-05 33.7 3.8 40 52-91 56-97 (221)
261 3zrd_A Thiol peroxidase; oxido 80.0 2.2 7.4E-05 32.1 4.5 39 52-91 78-117 (200)
262 3me7_A Putative uncharacterize 78.3 2.1 7.3E-05 31.0 3.9 41 52-92 28-72 (170)
263 1rw1_A Conserved hypothetical 78.1 1.2 4E-05 30.7 2.2 31 56-92 2-32 (114)
264 2pn8_A Peroxiredoxin-4; thiore 77.6 2.2 7.7E-05 32.3 4.0 40 52-91 48-89 (211)
265 3ixr_A Bacterioferritin comigr 76.5 3.5 0.00012 30.1 4.7 40 52-91 51-92 (179)
266 2wem_A Glutaredoxin-related pr 76.0 1.4 4.8E-05 30.6 2.2 22 55-76 21-47 (118)
267 1sji_A Calsequestrin 2, calseq 75.6 3.7 0.00013 33.5 5.0 39 52-91 28-74 (350)
268 2a4v_A Peroxiredoxin DOT5; yea 75.5 4.2 0.00014 28.8 4.8 37 54-90 37-74 (159)
269 3l78_A Regulatory protein SPX; 75.4 1.6 5.6E-05 30.2 2.4 31 56-92 2-32 (120)
270 1n8j_A AHPC, alkyl hydroperoxi 75.3 3.7 0.00013 30.3 4.5 40 52-91 30-71 (186)
271 3gx8_A Monothiol glutaredoxin- 74.8 1.7 5.8E-05 30.2 2.4 22 55-76 17-43 (121)
272 2wul_A Glutaredoxin related pr 74.6 1.6 5.5E-05 30.5 2.2 21 55-75 21-46 (118)
273 2wci_A Glutaredoxin-4; redox-a 74.4 1.3 4.4E-05 31.6 1.7 32 55-92 36-72 (135)
274 4hde_A SCO1/SENC family lipopr 73.6 3.3 0.00011 30.1 3.9 42 51-92 31-76 (170)
275 1z3e_A Regulatory protein SPX; 72.3 2.2 7.5E-05 30.0 2.5 32 55-92 2-33 (132)
276 2kok_A Arsenate reductase; bru 71.2 2.4 8.2E-05 29.3 2.4 33 54-92 5-37 (120)
277 2jwa_A Receptor tyrosine-prote 70.5 5.5 0.00019 22.7 3.4 20 2-21 6-25 (44)
278 1nm3_A Protein HI0572; hybrid, 69.5 2.7 9.3E-05 32.3 2.7 34 53-92 169-202 (241)
279 1t1v_A SH3BGRL3, SH3 domain-bi 68.6 2.3 8E-05 27.6 1.8 36 55-92 3-40 (93)
280 3fz4_A Putative arsenate reduc 68.3 3 0.0001 29.0 2.4 32 55-92 4-35 (120)
281 3ph9_A Anterior gradient prote 66.7 4.1 0.00014 29.4 3.0 25 52-76 44-68 (151)
282 1tp9_A Peroxiredoxin, PRX D (t 66.1 6.4 0.00022 28.1 4.0 40 52-91 35-78 (162)
283 3gkx_A Putative ARSC family re 65.8 2.9 9.8E-05 29.0 1.9 32 55-92 5-36 (120)
284 1s3c_A Arsenate reductase; ARS 64.3 2.9 9.9E-05 30.0 1.7 32 55-92 3-34 (141)
285 3f0i_A Arsenate reductase; str 63.8 3.3 0.00011 28.7 1.9 32 55-92 5-36 (119)
286 3p7x_A Probable thiol peroxida 63.5 5.9 0.0002 28.3 3.3 38 52-91 46-84 (166)
287 3rdw_A Putative arsenate reduc 62.6 2.9 9.9E-05 29.1 1.4 31 56-92 7-37 (121)
288 3ira_A Conserved protein; meth 62.3 4.2 0.00014 30.1 2.4 22 52-73 39-60 (173)
289 2wfc_A Peroxiredoxin 5, PRDX5; 60.1 7.5 0.00026 28.1 3.4 40 52-91 31-74 (167)
290 3qpm_A Peroxiredoxin; oxidored 58.7 12 0.0004 28.9 4.5 40 52-91 77-118 (240)
291 1u6t_A SH3 domain-binding glut 54.2 9.7 0.00033 26.6 3.0 37 55-93 1-39 (121)
292 3us3_A Calsequestrin-1; calciu 50.0 19 0.00066 29.4 4.6 40 53-92 248-289 (367)
293 2ks1_B Epidermal growth factor 49.7 27 0.00094 19.8 3.8 25 2-26 6-30 (44)
294 2dlx_A UBX domain-containing p 49.0 8.6 0.00029 27.8 2.1 23 52-74 42-64 (153)
295 1nm3_A Protein HI0572; hybrid, 48.4 17 0.00059 27.6 3.9 39 52-90 33-75 (241)
296 1sji_A Calsequestrin 2, calseq 47.2 17 0.00058 29.4 3.9 39 53-91 246-286 (350)
297 4g2e_A Peroxiredoxin; redox pr 46.4 4.1 0.00014 29.1 -0.1 39 52-90 30-70 (157)
298 4gd5_A Phosphate ABC transport 46.1 12 0.00041 29.2 2.7 26 3-28 1-26 (279)
299 3tjj_A Peroxiredoxin-4; thiore 44.8 18 0.00061 28.3 3.5 39 52-90 91-131 (254)
300 3us3_A Calsequestrin-1; calciu 44.2 34 0.0012 27.9 5.3 39 52-90 30-75 (367)
301 2l2t_A Receptor tyrosine-prote 44.1 23 0.0008 20.1 2.9 23 2-24 5-27 (44)
302 2pwj_A Mitochondrial peroxired 42.1 13 0.00044 26.9 2.1 38 53-90 45-85 (171)
303 3uma_A Hypothetical peroxiredo 38.9 19 0.00063 26.6 2.6 38 53-90 58-98 (184)
304 1xg8_A Hypothetical protein SA 38.9 82 0.0028 21.4 5.5 41 52-92 6-55 (111)
305 2jvx_A NF-kappa-B essential mo 37.7 7.2 0.00025 20.0 0.1 21 61-81 3-23 (28)
306 1prx_A HORF6; peroxiredoxin, h 36.8 45 0.0016 25.2 4.6 38 54-91 34-72 (224)
307 4gqc_A Thiol peroxidase, perox 36.5 5 0.00017 28.9 -0.9 39 52-90 33-73 (164)
308 2elu_A Zinc finger protein 406 35.2 10 0.00034 20.1 0.4 19 62-80 10-28 (37)
309 2jad_A Yellow fluorescent prot 33.9 17 0.00059 30.3 1.8 19 54-72 261-279 (362)
310 2qc7_A ERP31, ERP28, endoplasm 32.0 66 0.0023 24.8 4.9 38 52-91 22-61 (240)
311 2v2g_A Peroxiredoxin 6; oxidor 30.3 55 0.0019 25.0 4.2 38 54-91 31-70 (233)
312 2c0g_A ERP29 homolog, windbeut 29.5 1E+02 0.0035 23.9 5.6 39 52-92 33-74 (248)
313 2x8g_A Thioredoxin glutathione 29.4 24 0.00083 30.8 2.1 21 55-75 19-39 (598)
314 2k5c_A Uncharacterized protein 28.8 9 0.00031 24.9 -0.6 26 61-86 51-86 (95)
315 2jp3_A FXYD domain-containing 28.1 53 0.0018 20.3 2.9 20 8-27 18-37 (67)
316 1wii_A Hypothetical UPF0222 pr 27.2 16 0.00054 23.9 0.4 12 60-71 22-33 (85)
317 3mng_A Peroxiredoxin-5, mitoch 26.7 37 0.0013 24.6 2.4 36 54-89 46-83 (173)
318 1qxf_A GR2, 30S ribosomal prot 26.1 10 0.00034 23.6 -0.7 13 59-71 5-17 (66)
319 2jo1_A Phospholemman; FXYD1, N 25.8 64 0.0022 20.2 3.0 20 8-27 17-36 (72)
320 3a2v_A Probable peroxiredoxin; 25.6 58 0.002 25.3 3.5 38 54-91 36-74 (249)
321 1ard_A Yeast transcription fac 24.3 28 0.00096 15.7 1.0 16 62-77 3-18 (29)
322 2m0e_A Zinc finger and BTB dom 23.8 16 0.00054 16.6 -0.1 12 62-73 3-14 (29)
323 2zxe_G FXYD10, phospholemman-l 23.7 63 0.0022 20.4 2.7 20 8-27 20-39 (74)
324 1iij_A ERBB-2 receptor protein 23.5 11 0.00037 20.4 -0.8 7 10-16 10-16 (35)
325 1znf_A 31ST zinc finger from X 23.4 24 0.00084 15.7 0.6 17 62-78 2-18 (27)
326 2lx0_A Membrane fusion protein 23.3 83 0.0028 15.8 2.7 19 9-27 4-22 (32)
327 1p7a_A BF3, BKLF, kruppel-like 23.2 29 0.00098 17.1 0.9 17 61-77 11-27 (37)
328 2m0f_A Zinc finger and BTB dom 22.6 19 0.00066 16.3 0.1 16 62-77 3-18 (29)
329 2lvt_A Zinc finger and BTB dom 28.1 18 0.00063 16.7 0.0 16 62-77 3-18 (29)
330 1xcc_A 1-Cys peroxiredoxin; un 22.3 74 0.0025 23.9 3.5 38 54-91 34-72 (220)
331 1pfi_A Major coat protein of P 22.1 72 0.0024 17.8 2.4 16 8-23 20-35 (46)
332 2npb_A Selenoprotein W; struct 21.8 1.5E+02 0.0053 19.4 4.6 40 54-93 3-42 (96)
333 2hlg_A Fruit-specific protein; 21.7 15 0.00053 19.8 -0.4 8 62-69 16-23 (39)
334 3j20_W 30S ribosomal protein S 21.6 12 0.0004 23.1 -1.0 13 58-70 12-24 (63)
335 3j21_i 50S ribosomal protein L 21.2 19 0.00066 23.4 -0.1 17 54-70 28-44 (83)
336 2elr_A Zinc finger protein 406 21.0 35 0.0012 16.6 1.0 17 61-77 9-25 (36)
337 6rxn_A Rubredoxin; electron tr 20.8 24 0.00081 20.2 0.3 10 61-70 30-39 (46)
338 2lvr_A Zinc finger and BTB dom 26.1 21 0.00072 16.4 0.0 15 62-76 4-18 (30)
339 2l4c_A Endoplasmic reticulum r 20.6 1.4E+02 0.0047 20.3 4.3 34 52-89 39-72 (124)
340 3izc_m 60S ribosomal protein R 20.6 23 0.00078 23.5 0.2 17 54-70 29-45 (92)
341 2lvu_A Zinc finger and BTB dom 26.0 21 0.00072 15.9 0.0 14 62-75 3-16 (26)
342 3iz5_m 60S ribosomal protein L 20.4 24 0.00083 23.4 0.3 17 54-70 29-45 (92)
No 1
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=7.1e-34 Score=220.82 Aligned_cols=145 Identities=17% Similarity=0.264 Sum_probs=124.0
Q ss_pred CCCccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhc-CCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCC--
Q 029265 39 YDGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHY-GPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNS-- 115 (196)
Q Consensus 39 ~~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y-~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~-- 115 (196)
++.+++|+ ||+||++|+||+||||+++++.+.+++++| .|+|+|+||++|+++|++|..+++++.++.++++
T Consensus 6 ~d~~~~g~-----a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~p~~~h~~s~~aaraa~aa~~~~~~~ 80 (182)
T 3gn3_A 6 SDALSWGH-----GPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQSQPWHMFSGVIVRCILAAATLEGGK 80 (182)
T ss_dssp GGSSEEEC-----CSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECCCTTSTTHHHHHHHHHHHTTSTTHH
T ss_pred ccccccCC-----CCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEcCCCCCccHHHHHHHHHHHHHhccCh
Confidence 34556664 899999999999999999999999988876 7899999999999999999999999999987755
Q ss_pred ccHHHHHHHHHhcChhhh-cC----CCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCc
Q 029265 116 SATFCLLEWFFKQQEKFY-NA----PTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFS 190 (196)
Q Consensus 116 ~~~~~~~~~lf~~q~~~~-~~----~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV 190 (196)
++||+|+++||++|+.|. .+ +..+++..++ |.++|++ +|++. +++ +++.++...++.+.++++++||
T Consensus 81 ~~f~~~~~aLf~~q~~~~~~~~~~~~~~~~~~~~~---l~~~a~~-~Gld~-~~~---l~~~~~~~~v~~~~~~a~~~GV 152 (182)
T 3gn3_A 81 ESAKAVMTAVASHREEFEFEHHAGGPNLDATPNDI---IARIERY-SGLAL-AEA---FANPELEHAVKWHTKYARQNGI 152 (182)
T ss_dssp HHHHHHHHHHHHTGGGGSCBTTTBSGGGGCCHHHH---HHHHHHH-HTCCC-HHH---HHCGGGHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCcccccccccccccCCCCHHHH---HHHHHHH-hCCCH-HHH---hcChHHHHHHHHHHHHHHHCCC
Confidence 799999999999999983 32 3356676554 5566777 89995 877 5578889999999999999999
Q ss_pred ccccCC
Q 029265 191 FNTSFF 196 (196)
Q Consensus 191 ~GTPtF 196 (196)
+|||||
T Consensus 153 ~gtPtf 158 (182)
T 3gn3_A 153 HVSPTF 158 (182)
T ss_dssp CSSSEE
T ss_pred CccCEE
Confidence 999997
No 2
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=99.97 E-value=1.4e-31 Score=211.54 Aligned_cols=146 Identities=15% Similarity=0.132 Sum_probs=118.0
Q ss_pred CCccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHH-hc--CCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCc
Q 029265 40 DGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQ-HY--GPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSS 116 (196)
Q Consensus 40 ~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~-~y--~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~ 116 (196)
++.++|++ +||+||++|+||+||+|+++++.+.+.++ +| .|+|+|+||++|+ |+.|..++.++.|+ +++
T Consensus 6 ~~~~~G~~---~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~pl--~~~s~~aa~aa~~~---~~~ 77 (205)
T 3gmf_A 6 GHHLLGNP---AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNFVR--DPIDMTVALITNCV---PPS 77 (205)
T ss_dssp TEEEESCT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEECCC--SHHHHHHHHHHHHS---CHH
T ss_pred CCceecCC---CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeCCC--CcchHHHHHHHHhc---CHh
Confidence 45678884 59999999999999999999999987776 78 5899999999975 88887777666553 678
Q ss_pred cHHHHHHHHHhcChhhhcCCCCCCCHH------------HH-----HHHHHHHHHhhcCCCchHHHhhccCCchhhHHHH
Q 029265 117 ATFCLLEWFFKQQEKFYNAPTQNMTRT------------AV-----VKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTR 179 (196)
Q Consensus 117 ~~~~~~~~lf~~q~~~~~~~~~~~t~~------------~~-----~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r 179 (196)
+||+|+++||++|++|.+.. .+++.. .+ .+.|.+++.+ .|++. ++|.+++++..+...++
T Consensus 78 ~f~~~~~~Lf~~q~~~~~~~-~~~~~~~~~~w~~~~~~~~l~~ia~~~~L~~~a~~-~Gld~-~~~~~~l~s~~~~~~v~ 154 (205)
T 3gmf_A 78 RFFTLHTAFMRSQAQWIGPL-ANSTEAQRQRWFNGTFATRTRAIASDFRFYDFMAA-RGMDR-STLDRCLSNEALAKKLA 154 (205)
T ss_dssp HHHHHHHHHHHTHHHHCHHH-HHCCHHHHHTTSSSCHHHHHHHHHHHTTHHHHHHT-TTCCH-HHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHhcc-cccchhhhhccccchhHHHHHhccCHHHHHHHHHH-cCCCH-HHHHHHHcCHHHHHHHH
Confidence 99999999999999774311 012221 11 1236677777 89995 99999999999999999
Q ss_pred HHHHHH-hccCcccccCC
Q 029265 180 VSFKVT-QKFFSFNTSFF 196 (196)
Q Consensus 180 ~~~k~a-~~~GV~GTPtF 196 (196)
.+.+.+ +++||+|||||
T Consensus 155 ~~~~~a~~~~GV~GtPtf 172 (205)
T 3gmf_A 155 AETDEAINQYNVSGTPSF 172 (205)
T ss_dssp HHHHHHHHHHCCCSSSEE
T ss_pred HHHHHHHHHcCCccCCEE
Confidence 999999 99999999997
No 3
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=99.97 E-value=1.2e-30 Score=208.99 Aligned_cols=145 Identities=9% Similarity=0.065 Sum_probs=122.9
Q ss_pred CCCCCccccCCCCCCCCeEEEEecCCCChhhhhhchHH-HHHHHhcC--CcEEEEEEecCCCCCcChHHHHHHHHHHHhc
Q 029265 37 AKYDGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPL-KQALQHYG--PHVSLVVHLLPLPYHDNAYATSRALHIVNRT 113 (196)
Q Consensus 37 ~~~~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l-~~~~~~y~--~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~ 113 (196)
+.|.+.++|++ +||++|++|+||.||||++|++.+ .++.++|+ |+|+|+||++|+ |+.|..+++++.|+.
T Consensus 27 ~~~~~~~~G~~---~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p~--~~~s~~Aa~aa~aa~-- 99 (226)
T 3f4s_A 27 PLPNDKLLGDP---KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFPL--DYRGLKAAMLSHCYE-- 99 (226)
T ss_dssp CCTTCCEESCT---TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECCC--SHHHHHHHHHGGGCC--
T ss_pred CCCCCCccCCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCCC--ChhHHHHHHHHHHhh--
Confidence 35578888985 499999999999999999999975 67888894 799999999998 788888887777653
Q ss_pred CCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhc-cCccc
Q 029265 114 NSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQK-FFSFN 192 (196)
Q Consensus 114 ~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~-~GV~G 192 (196)
++++||+|+++||++|+.|..... .+ .+.|.++|.+ +|++. ++|.+++++..+...++.+.+.+++ +||+|
T Consensus 100 ~~~~f~~~~~aLF~~q~~~~~~~~--~~----~~~L~~iA~~-~Gld~-~~~~~~l~s~~~~~~v~~~~~~a~~~~GV~G 171 (226)
T 3f4s_A 100 KQEDYFNFNKAVFNSIDSWNYYNL--SD----LTLLQRIAAL-SNLKQ-DAFNQCINDKKIMDKIVNDKSLAINKLGITA 171 (226)
T ss_dssp SHHHHHHHHHHHHHTGGGSCSSST--TC----CHHHHHHHHH-TTCCH-HHHHHHHTCHHHHHHHHHHHHHHHHHHCCCS
T ss_pred ChHHHHHHHHHHHHhCHhhccccc--Cc----HHHHHHHHHH-cCCCH-HHHHHHHhCHHHHHHHHHHHHHHHHHcCCCc
Confidence 568999999999999988754321 11 2578889989 89995 9999999999999999999999999 99999
Q ss_pred ccCC
Q 029265 193 TSFF 196 (196)
Q Consensus 193 TPtF 196 (196)
||||
T Consensus 172 tPtf 175 (226)
T 3f4s_A 172 VPIF 175 (226)
T ss_dssp SCEE
T ss_pred CCEE
Confidence 9997
No 4
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=99.96 E-value=3.7e-30 Score=202.81 Aligned_cols=149 Identities=11% Similarity=0.061 Sum_probs=123.8
Q ss_pred CCCCCCccccCCCCCCCCeEEEEecCCCChhhhhhchHHH-HHHHhcC--CcEEEEEEecCCCCCcChHHHHHHHHHHHh
Q 029265 36 PAKYDGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLK-QALQHYG--PHVSLVVHLLPLPYHDNAYATSRALHIVNR 112 (196)
Q Consensus 36 p~~~~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~-~~~~~y~--~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~ 112 (196)
|......++|++ +||++|++|+||.||||+++++.+. .+.++|+ |+|+|+++++|+ .+++|..|+.|+.|+..
T Consensus 16 ~~~~~~~~~G~~---~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~-~~~~s~~Aa~aa~a~~~ 91 (202)
T 3gha_A 16 PSIKGQPVLGKD---DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMF-HGKGSRLAALASEEVWK 91 (202)
T ss_dssp CCCTTSCEESCT---TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCC-SHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceecCC---CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCc-cchhHHHHHHHHHHHHh
Confidence 455567788884 5999999999999999999999985 4556785 699999999987 23578889999998887
Q ss_pred cCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCccc
Q 029265 113 TNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFN 192 (196)
Q Consensus 113 ~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~G 192 (196)
.++++||+|+++||++|...... ..+ .+.|.++|.+..|++. ++|.+++++..+...++.+.+.++++||+|
T Consensus 92 ~~~~~f~~~~~aLf~~~~~~~~~---~~~----~~~L~~~a~~~~Gld~-~~~~~~l~s~~~~~~v~~~~~~a~~~gV~g 163 (202)
T 3gha_A 92 EDPDSFWDFHEKLFEKQPDTEQE---WVT----PGLLGDLAKSTTKIKP-ETLKENLDKETFASQVEKDSDLNQKMNIQA 163 (202)
T ss_dssp HCGGGHHHHHHHHHHHCCSSSSC---CCC----HHHHHHHHHHHSSSCH-HHHHHHHHHTTTHHHHHHHHHHHHHTTCCS
T ss_pred hCHHHHHHHHHHHHHhCcccccc---ccC----HHHHHHHHHHhcCCCH-HHHHHHHhChHHHHHHHHHHHHHHHcCCCc
Confidence 78899999999999998653221 122 3467888877469995 999999999999999999999999999999
Q ss_pred ccCC
Q 029265 193 TSFF 196 (196)
Q Consensus 193 TPtF 196 (196)
||||
T Consensus 164 tPtf 167 (202)
T 3gha_A 164 TPTI 167 (202)
T ss_dssp SCEE
T ss_pred CCEE
Confidence 9997
No 5
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=99.95 E-value=4.8e-28 Score=187.44 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=116.0
Q ss_pred CccccCCCCCCCCeEEEEecCCCChhhhhhchHHH-HHHHhcC--CcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCcc
Q 029265 41 GFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLK-QALQHYG--PHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSA 117 (196)
Q Consensus 41 g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~-~~~~~y~--~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~ 117 (196)
+.++|++ +++++|++|+||.||||+++++.+. ++.++|+ ++|+|+++++|+. +++|..+++++.|+...++++
T Consensus 3 ~~~~G~~---~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~p~~-~~~s~~aa~a~~~a~~~~~~~ 78 (186)
T 3bci_A 3 SATTSSK---NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNLAFL-GKDSIVGSRASHAVLMYAPKS 78 (186)
T ss_dssp -----------CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEECCCS-CTTHHHHHHHHHHHHHHCGGG
T ss_pred CcCcCCC---CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEecCcC-CcchHHHHHHHHHHHHhCHHH
Confidence 4566774 4999999999999999999999986 5667786 6899999999873 478999999999998878889
Q ss_pred HHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHH---Hhhcc--CCchhhHHHHHHHHHHhccCccc
Q 029265 118 TFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSA---LESGF--SDRSTDLLTRVSFKVTQKFFSFN 192 (196)
Q Consensus 118 ~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~---~~~~~--~~~~~~~~~r~~~k~a~~~GV~G 192 (196)
||+|+++||++|...... ..+ .+.|.++|.+ +|++. ++ |.+++ .+..+...++.+.+.+.++||+|
T Consensus 79 ~~~~~~~lf~~~~~~~~~---~~~----~~~l~~~a~~-~Gld~-~~~~~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~G 149 (186)
T 3bci_A 79 FLDFQKQLFAAQQDENKE---WLT----KELLDKHIKQ-LHLDK-ETENKIIKDYKTKDSKSWKAAEKDKKIAKDNHIKT 149 (186)
T ss_dssp HHHHHHHHHHTCCCTTSC---CCC----HHHHHHHHHT-TCCCH-HHHHHHHHHHHSTTCHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHhcCcccCCC---CCC----HHHHHHHHHH-cCCCH-HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999988653321 123 3568888989 89995 88 99999 88899999999999999999999
Q ss_pred ccCC
Q 029265 193 TSFF 196 (196)
Q Consensus 193 TPtF 196 (196)
||||
T Consensus 150 tPt~ 153 (186)
T 3bci_A 150 TPTA 153 (186)
T ss_dssp SSEE
T ss_pred CCeE
Confidence 9997
No 6
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.95 E-value=3.9e-27 Score=180.26 Aligned_cols=138 Identities=17% Similarity=0.180 Sum_probs=121.3
Q ss_pred CCCCccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCcc
Q 029265 38 KYDGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSA 117 (196)
Q Consensus 38 ~~~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~ 117 (196)
.+.+.++|+++ +|++|++|+|+.||+|+++++.+++++++|+ +|+|+++++|+. |+++..+++++.++... ++
T Consensus 11 ~~~~~~~G~~~---a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~-~v~~~~~~~p~~-~~~s~~aa~~~~~a~~~--~~ 83 (175)
T 3gyk_A 11 DPNAPVLGNPE---GDVTVVEFFDYNCPYCRRAMAEVQGLVDADP-NVRLVYREWPIL-GEGSDFAARAALAARQQ--GK 83 (175)
T ss_dssp CTTSCEEECTT---CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEECCCS-CHHHHHHHHHHHHGGGG--TC
T ss_pred CCCCCCcCCCC---CCEEEEEEECCCCccHHHHHHHHHHHHHhCC-CEEEEEEeCCCC-CCChHHHHHHHHHHHHH--hH
Confidence 45567788854 9999999999999999999999999999875 599999999984 78899999999888754 78
Q ss_pred HHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 118 TFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 118 ~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
+|+|++++|.+|..+ + .+.|.++|.+ .|++. ++|.+++.+..+...++.+.+.+.++||+|||||
T Consensus 84 ~~~~~~~lf~~~~~~--------~----~~~l~~~a~~-~Gld~-~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~ 148 (175)
T 3gyk_A 84 YEAFHWALMGMSGKA--------N----ETGVLRIARE-VGLDT-EQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSF 148 (175)
T ss_dssp HHHHHHHHHTCSSCC--------S----HHHHHHHHHH-TTCCH-HHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEE
T ss_pred HHHHHHHHHhcCCCC--------C----HHHHHHHHHH-cCCCH-HHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEE
Confidence 999999999987543 2 2468889989 89995 9999999999999999999999999999999996
No 7
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=99.94 E-value=8.3e-27 Score=178.94 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=115.9
Q ss_pred cccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHH
Q 029265 43 FYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLL 122 (196)
Q Consensus 43 ~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~ 122 (196)
++++| .+++++|+||+||+||||++|++.+.+++++|+++++++++++|++.|+.+..++.++.+... .+.+++++
T Consensus 14 vl~~p--~~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~--~~~~~~~~ 89 (184)
T 4dvc_A 14 VLKTP--ASSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIA--LEVEDKMV 89 (184)
T ss_dssp ECSSC--CCSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHH--HTCHHHHH
T ss_pred ECCCC--CCCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHH--cCcHHHHH
Confidence 44554 357889999999999999999999999999999999999999999877766666666555544 35789999
Q ss_pred HHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 123 EWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 123 ~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
+.+|..+....... .+ .+.|.+++.+ .|++. ++|.+|+++..+...++.+.+.++++||+|||||
T Consensus 90 ~~~~~~~~~~~~~~---~~----~~~l~~~a~~-~Gld~-~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtf 154 (184)
T 4dvc_A 90 PVMFNRIHTLRKPP---KD----EQELRQIFLD-EGIDA-AKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAV 154 (184)
T ss_dssp HHHHHHHHTSCCCC---SS----HHHHHHHHHT-TTCCH-HHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEE
T ss_pred HHHHHHHHHHhhcc---ch----HHHHHHHHHH-hCCCH-HHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEE
Confidence 99998765433221 12 2468888989 89995 9999999999999999999999999999999997
No 8
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=99.92 E-value=6.4e-25 Score=170.51 Aligned_cols=134 Identities=12% Similarity=0.103 Sum_probs=113.2
Q ss_pred CCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhcC
Q 029265 50 DSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQQ 129 (196)
Q Consensus 50 ~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q 129 (196)
++++++|++|+||.||+|+++++.++++.++|+++|+| +.+|+++|+.+..+++++.++... +++|+|++.||+.+
T Consensus 23 ~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~--~~~p~~~~~~~~~aa~a~~aa~~~--g~~~~~~~~lf~~~ 98 (192)
T 3h93_A 23 QPGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHF--VRLPALFGGIWNVHGQMFLTLESM--GVEHDVHNAVFEAI 98 (192)
T ss_dssp STTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEE--EEEECCCSTHHHHHHHHHHHHHHH--TCCHHHHHHHHHHH
T ss_pred CCCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEE--EEEehhhccchHHHHHHHHHHHHc--CCHHHHHHHHHHHH
Confidence 46999999999999999999999999999999886654 567777888888899999888765 57999999999875
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 130 EKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 130 ~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
... + .+... .+.|.+++.+ .|++. ++|.+++.+..+...++.+.+.+.++||+|||||
T Consensus 99 ~~~---~-~~~~~---~~~l~~~a~~-~Gld~-~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~ 156 (192)
T 3h93_A 99 HKE---H-KKLAT---PEEMADFLAG-KGVDK-EKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTM 156 (192)
T ss_dssp HTS---C-CCCCS---HHHHHHHHHT-TTCCH-HHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEE
T ss_pred HHh---C-cCCCC---HHHHHHHHHH-cCCCH-HHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 321 1 12222 3568888989 89995 9999999999999999999999999999999997
No 9
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=99.92 E-value=2.2e-24 Score=167.21 Aligned_cols=136 Identities=14% Similarity=0.095 Sum_probs=112.2
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhcCh
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQQE 130 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~ 130 (196)
+++++|++|+|+.||||+.+++.+.+++++|+++|+|+ .+|+++|+.+..+++++.++... +++|+|+++||+.+.
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~--~~p~~~~~~s~~a~~a~~~a~~~--~~~~~~~~~lf~~~~ 99 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFT--LVPAVFGGVWDPFARAYLAADVL--GVAKRSHTAMFEAIH 99 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEE--EEECCCSTTHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEE--EeCcccCCCcHHHHHHHHHHHHc--CcHHHHHHHHHHHHH
Confidence 59999999999999999999999999999998777665 45666688899999999888764 689999999998764
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 131 KFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 131 ~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
...... .+... .+.|.+++.+ .|++. ++|.+++++..+...++.+.+.+.++||+|||||
T Consensus 100 ~~~~~~-~~~~~---~~~l~~~a~~-~Gld~-~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~ 159 (193)
T 2rem_A 100 EKGSVP-IQNVG---PDELAVFYAG-YGVQP-DRFVATFNGPEVEKRFQAARAYALKVRPVGTPTI 159 (193)
T ss_dssp TTCCSC-STTCC---HHHHHHHHHT-TTCCH-HHHHHHHTSHHHHHHHHHHHHHHHHHCCSSSSEE
T ss_pred HhcccC-cCCCC---HHHHHHHHHH-cCCCH-HHHHHHHhChHHHHHHHHHHHHHHHhCCCCCCeE
Confidence 322100 01121 3467888888 89995 9999999999999999999999999999999996
No 10
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=99.91 E-value=2.1e-24 Score=167.73 Aligned_cols=134 Identities=14% Similarity=0.079 Sum_probs=112.5
Q ss_pred CCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhcC
Q 029265 50 DSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQQ 129 (196)
Q Consensus 50 ~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q 129 (196)
++++++|++|+|+.||||+++++.+.+++++|+++ ++++.+|+++|+.+..+++++.++... +++|+|++.+|+.+
T Consensus 20 ~~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~--v~~~~~p~~~~~~s~~aa~a~~aa~~~--~~~~~~~~~lf~~~ 95 (195)
T 2znm_A 20 QSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSD--AYLRTEHVVWQPEMLGLARMAAAVNLS--GLKYQANPAVFKAV 95 (195)
T ss_dssp SSSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTT--EEEEEEECCCSGGGHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred CCCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCc--eEEEEeccccCcccHHHHHHHHHHHHc--CcHHHHHHHHHHHH
Confidence 45999999999999999999999999999998765 566677877888899999999888754 68999999999876
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHhhc-CCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 130 EKFYNAPTQNMTRTAVVKEIVKFAAEGI-GNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 130 ~~~~~~~~~~~t~~~~~~~l~~~A~~~~-g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
..... +... .+.|.+++.+ . |++. ++|.+++++..+...++.+.+.+.++||+|||||
T Consensus 96 ~~~~~----~~~~---~~~l~~~a~~-~~Gld~-~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~ 154 (195)
T 2znm_A 96 YEQKI----RLEN---RSVAGKWALS-QKGFDG-KKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTV 154 (195)
T ss_dssp HHCSS----CTTS---HHHHHHHHHT-CSSSCH-HHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred HHhCC----CCCC---HHHHHHHHHH-cCCCCH-HHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeE
Confidence 43211 2222 2467888888 8 9995 9999999999999999999999999999999996
No 11
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=99.91 E-value=1.6e-24 Score=169.19 Aligned_cols=134 Identities=10% Similarity=0.129 Sum_probs=111.7
Q ss_pred CCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHH--HHHHHHh
Q 029265 50 DSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFC--LLEWFFK 127 (196)
Q Consensus 50 ~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~--~~~~lf~ 127 (196)
++++++|++|+||.||||+++++.++++.++|+++ ++|+.+|+.+|+.+..+++++.++..++ ++|+ |++.+|+
T Consensus 22 ~~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~--v~~~~~p~~~~~~~~~aa~a~~aa~~~g--~~~~~~~~~~lf~ 97 (193)
T 3hz8_A 22 QAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDD--MYLRTEHVVWQKEMLTLARLAAAVDMAA--ADSKDVANSHIFD 97 (193)
T ss_dssp STTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTT--EEEEEEECCCSGGGHHHHHHHHHHHHHT--GGGHHHHHHHHHH
T ss_pred CCCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCC--eEEEEecCCCCcccHHHHHHHHHHHHcC--chhHHhHHHHHHH
Confidence 34899999999999999999999999999999874 5677888888888788999998887654 5777 9999997
Q ss_pred cChhhhcCCCCCCCHHHHHHHHHHHHHhhc-CCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 128 QQEKFYNAPTQNMTRTAVVKEIVKFAAEGI-GNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 128 ~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~-g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
...... .++.. .+.|.+++.+ . |++. ++|.+++++..+...++.+.+.+.++||+|||||
T Consensus 98 a~~~~~----~~~~~---~~~l~~~a~~-~~Gld~-~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gtPt~ 158 (193)
T 3hz8_A 98 AMVNQK----IKLQN---PEVLKKWLGE-QTAFDG-KKVLAAYESPESQARADKMQELTETFQIDGVPTV 158 (193)
T ss_dssp HHHTSC----CCTTS---HHHHHHHHHH-CTTTTH-HHHHHHHHSHHHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred HHHHhC----cCCCC---HHHHHHHHHH-ccCCCH-HHHHHHHcCHHHHHHHHHHHHHHHHhCCCcCCEE
Confidence 542211 12221 3568889989 8 9995 9999999999999999999999999999999997
No 12
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=99.91 E-value=2.5e-24 Score=168.04 Aligned_cols=132 Identities=10% Similarity=0.045 Sum_probs=110.2
Q ss_pred CCeEEEEecCCCChhhhhhchHH---HHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhc
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL---KQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQ 128 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l---~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~ 128 (196)
.+++|++|+||.||||+++++.+ +++.++|+++|+|+++++|+. ++.+..+++|+.++...+ .+++|++++|+.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~~~-~~~s~~aa~a~~aA~~~g--~~~~~~~~lf~a 97 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVEFL-GPLGKELTQAWAVAMALG--VEDKVTVPLFEA 97 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECSSS-STTHHHHHHHHHHHHHHT--CHHHHHHHHHHH
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecccc-cccCHHHHHHHHHHHHcC--cHHHHHHHHHHH
Confidence 47899999999999999999987 589999998999999999885 677888888887776654 578899999976
Q ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 129 QEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 129 q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
...-.. ... .+.|.++|.+ .|++. ++|.+++++..+...++.+.+.+.++||+|||||
T Consensus 98 ~~~~~~-----~~~---~~~L~~~a~~-~Gld~-~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gtPtf 155 (191)
T 3l9s_A 98 VQKTQT-----VQS---AADIRKVFVD-AGVKG-EDYDAAWNSFVVKSLVAQQEKAAADLQLQGVPAM 155 (191)
T ss_dssp HHTSCC-----CSS---HHHHHHHHHH-TTCCH-HHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred HHhcCC-----CCC---HHHHHHHHHH-cCCCH-HHHHHHHhCHHHHHHHHHHHHHHHHhCCcccCEE
Confidence 321111 111 3568889999 89995 9999999999999999999999999999999997
No 13
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=99.90 E-value=6.7e-24 Score=162.29 Aligned_cols=136 Identities=13% Similarity=0.238 Sum_probs=101.8
Q ss_pred CCCCCccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhc--CCcEEEEEEecCCCCCcChHHHHHHHH-HHHhc
Q 029265 37 AKYDGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHY--GPHVSLVVHLLPLPYHDNAYATSRALH-IVNRT 113 (196)
Q Consensus 37 ~~~~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y--~~~v~~~~~~~pl~~h~~s~~aa~a~~-a~~~~ 113 (196)
..+.+.++|++ ++|++|++|+|+.||||+++++.+.+++++| .++|+|+++++|+.. .+..++.++. ++...
T Consensus 15 ~~~~~~~~G~~---~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~a~~~~~~~~~~ 89 (175)
T 1z6m_A 15 NTETGLHIGES---NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFDKEK--ESLQRGNVMHHYIDYS 89 (175)
T ss_dssp CSSSSEEESCT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECCCCS--TTTHHHHHHHTTCCTT
T ss_pred CCCCCcccCCC---CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCCCCc--ccHHHHHHHHHHHHhc
Confidence 35567788885 4999999999999999999999999999999 789999999999853 2333333333 22234
Q ss_pred CCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccc
Q 029265 114 NSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNT 193 (196)
Q Consensus 114 ~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GT 193 (196)
++++||+|+++||++|..|.+ ++. +.|.+++.+.+|++. + .....++.+.+.++++||+||
T Consensus 90 ~~~~~~~~~~~lf~~~~~~~~-----~~~----~~l~~~a~~~~Gld~-~---------~~~~~~~~~~~~a~~~gv~gt 150 (175)
T 1z6m_A 90 APEQALSALHKMFATQDEWGN-----LTL----EEVATYAEKNLGLKE-Q---------KDATLVSAVIAEANAAHIQFV 150 (175)
T ss_dssp CHHHHHHHHHHHHHTHHHHTT-----SCH----HHHHHHHHHTSCCCC-C---------CCHHHHHHHHHHHHHHTCCSS
T ss_pred ChHHHHHHHHHHHHcChhhcc-----CCH----HHHHHHHHHhcCCCc-c---------cCHHHHHHHHHHHHHcCCCCc
Confidence 678999999999999877642 232 456677543289984 3 123455667788999999999
Q ss_pred cCC
Q 029265 194 SFF 196 (196)
Q Consensus 194 PtF 196 (196)
|||
T Consensus 151 Pt~ 153 (175)
T 1z6m_A 151 PTI 153 (175)
T ss_dssp CEE
T ss_pred CeE
Confidence 997
No 14
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=99.90 E-value=9.5e-24 Score=164.23 Aligned_cols=132 Identities=12% Similarity=0.079 Sum_probs=109.4
Q ss_pred CCeEEEEecCCCChhhhhhchHH---HHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhc
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL---KQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQ 128 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l---~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~ 128 (196)
.+++|++|+||.||+|+++++.+ +++.++|+++|+|+++++|+. |+.+..+++++.++...+ .+++|++.+|+.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~aa~a~~aA~~~g--~~~~~~~~lf~a 90 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSLL-GPLGHELTRAWALAMVMK--ETDVIEKAFFTA 90 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSSS-STTHHHHHHHHHHHHHHT--CHHHHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechhc-ccccHHHHHHHHHHHHcC--cHHHHHHHHHHH
Confidence 35799999999999999999986 578788888999999999985 888888999888776654 577888888865
Q ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHhhc-CCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 129 QEKFYNAPTQNMTRTAVVKEIVKFAAEGI-GNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 129 q~~~~~~~~~~~t~~~~~~~l~~~A~~~~-g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
+..... ..+ .+.|.+++.+ . |++. ++|.+++++..+...++.+.+.+.++||+|||||
T Consensus 91 ~~~~~~----~~~----~~~l~~~a~~-~~Gld~-~~~~~~~~s~~~~~~v~~~~~~a~~~gv~GtPt~ 149 (189)
T 3l9v_A 91 GMVEKR----LHS----PDDVRRVFMS-ATGISR-GEYDRSIKSPAVNDMVALQERLFKEYGVRGTPSV 149 (189)
T ss_dssp HTTTCC----CCS----HHHHHHHHHH-HHCCCH-HHHHHHTTSHHHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred Hhhhcc----CCC----HHHHHHHHHH-ccCCCH-HHHHHHHhhHHHHHHHHHHHHHHHHhCCCccCEE
Confidence 432111 112 3568889999 8 9995 9999999999999999999999999999999997
No 15
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=99.89 E-value=1.8e-23 Score=162.62 Aligned_cols=133 Identities=15% Similarity=0.154 Sum_probs=112.4
Q ss_pred CCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhcC
Q 029265 50 DSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQQ 129 (196)
Q Consensus 50 ~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q 129 (196)
++++++|++|+|+.||+|+++++.+.++.++|+++|+|+ .+|+++|+.+..+++++.++...+ +|+|+++||+.+
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~--~~~~~~~~~s~~aa~a~~aa~~~g---~~~~~~~lf~~~ 97 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLK--QVPIAFNAGMKPLQQLYYTLQALE---RPDLHPKVFTAI 97 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEE--EEECCSSGGGHHHHHHHHHHHHTT---CTTHHHHHHHHH
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEE--EEecccCcchHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 458999999999999999999999999999998866554 566777888999999999888765 999999999875
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 130 EKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 130 ~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
..... ++.. .+.|.+++.+ .|++. ++|.+++++..+...++.+.+.+.++||+|||||
T Consensus 98 ~~~~~----~~~~---~~~l~~~a~~-~Gld~-~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gtPt~ 155 (195)
T 3hd5_A 98 HTERK----RLFD---KKAMGEWAAS-QGVDR-AKFDSVFDSFSVQTQVQRASQLAEAAHIDGTPAF 155 (195)
T ss_dssp HTSCC----CCCS---HHHHHHHHHH-TTCCH-HHHHHHHTCHHHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred HHhcc----CCCC---HHHHHHHHHH-hCCCH-HHHHHHHcCHHHHHHHHHHHHHHHHhCCCcCceE
Confidence 43221 2222 3467888888 89995 9999999999999999999999999999999997
No 16
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=99.89 E-value=1.2e-23 Score=163.26 Aligned_cols=133 Identities=13% Similarity=0.035 Sum_probs=106.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhc-CCccHHHHHHHHHhcCh
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRT-NSSATFCLLEWFFKQQE 130 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~-~~~~~~~~~~~lf~~q~ 130 (196)
.+++|++|+||.||||++++|.++++.++| +|+ ++.+|+++|+.+..+++++.++... +.+.+|+|+++||+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~--~~~~p~~~~~~~~~aa~a~~Aa~~q~g~~~~~~~~~~lf~a~~ 97 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTD--IGKMHITFNQSAHIASMFYYAAEMQVDGAPDHAFMEDLFAATQ 97 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSC--CEEEECCSSSHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCe--EEEEeccCCccchHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 578999999999999999999999999998 454 4566777888888888888887653 44458999999998754
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHhhcCC-CchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 131 KFYNAPTQNMTRTAVVKEIVKFAAEGIGN-SYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 131 ~~~~~~~~~~t~~~~~~~l~~~A~~~~g~-~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
.... .......+.|.+++.+ .|+ |. ++|.+++.+ .+...++.+.+.++++||+|||||
T Consensus 98 ~~~~-----~~~~~~~~~L~~~a~~-~Gl~d~-~~~~~~~~~-~~~~~v~~~~~~a~~~gv~GtPtf 156 (185)
T 3feu_A 98 MGEG-----TTLTEQQEAYSKAFTS-RGLVSP-YDFNEEQRD-TLIKKVDNAKMLSEKSGISSVPTF 156 (185)
T ss_dssp CCTT-----SCHHHHHHHHHHHHHT-TTCCCG-GGCCHHHHH-HHHHHHHHHHHHHHHHTCCSSSEE
T ss_pred Hhcc-----CCCCCCHHHHHHHHHH-cCCCCH-HHHHHHHHH-HHHHHHHHHHHHHHHcCCCccCEE
Confidence 3211 0123345789999999 998 85 888888776 677899999999999999999997
No 17
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=99.87 E-value=4.4e-22 Score=154.14 Aligned_cols=144 Identities=8% Similarity=0.009 Sum_probs=106.1
Q ss_pred ccccCCCCCCCCeEEEEecCCCChhhhhhchHH-HHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcC------
Q 029265 42 FFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPL-KQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTN------ 114 (196)
Q Consensus 42 ~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l-~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~------ 114 (196)
.++|++. +++++++++|+|+.||||+.+++.+ .++.++|+++|+++++++|+. ++.+..++++..++.+.+
T Consensus 8 ~~lg~p~-~~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 85 (195)
T 3c7m_A 8 MVLEKPI-PNADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLETK-GEYGKQASEVFAVLINKDKAAGIS 85 (195)
T ss_dssp EECSSCC-SSCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECTTS-STTHHHHHHHHHHHHHHHHHTTCC
T ss_pred eeccCCC-CCCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecCcc-ccccHHHHHHHHHHHHhhhhcCCC
Confidence 3567752 2699999999999999999999999 889889988899998887764 444555555544433221
Q ss_pred ----CccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHH----HHhhcCCCchHHHhhccCCchhhHHHHHHHHHHh
Q 029265 115 ----SSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKF----AAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQ 186 (196)
Q Consensus 115 ----~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~----A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~ 186 (196)
...+|+|++.+|+..- .+ . .+++..+ .|.++ |.+ .|++. ++|.+++++.++...++.+.+.+.
T Consensus 86 ~~~~~~~~~~~~~~l~~a~~--~~-~-~~~~~~~---~l~~~~~~~a~~-~Gld~-~~~~~~~~~~~~~~~v~~~~~~a~ 156 (195)
T 3c7m_A 86 LFDANSQFKKAKFAYYAAYH--DK-K-ERWSDGK---DPAAFIKTGLDA-AGMSQ-ADFEAALKEPAVQETLEKWKASYD 156 (195)
T ss_dssp TTSTTCHHHHHHHHHHHHHH--TS-C-CCTTTTT---CHHHHHHHHHHH-HTCCH-HHHHHHHTSHHHHHHHHHGGGHHH
T ss_pred chhHHHHHHHHHHHHHHHHH--hc-C-CCCCCHH---HHHHHHHhHHHH-cCCCH-HHHHHHHcChHHHHHHHHHHHHHH
Confidence 1246888888886421 11 0 1222222 24445 888 89995 999999999999999999999999
Q ss_pred ccCcccccCC
Q 029265 187 KFFSFNTSFF 196 (196)
Q Consensus 187 ~~GV~GTPtF 196 (196)
++||+|||||
T Consensus 157 ~~gv~gtPt~ 166 (195)
T 3c7m_A 157 VAKIQGVPAY 166 (195)
T ss_dssp HHHHHCSSEE
T ss_pred HcCCCccCEE
Confidence 9999999997
No 18
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=99.86 E-value=2e-21 Score=153.04 Aligned_cols=136 Identities=13% Similarity=0.159 Sum_probs=109.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCC-----------------------------------
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPY----------------------------------- 96 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~----------------------------------- 96 (196)
.+++|++|+|+.||||+.+++.++++.+.+..+|+|++|+++|..
T Consensus 6 ~~~~I~~f~D~~CP~C~~~~~~~~~l~~~~~~~v~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~r~a~~~g~~~~~~~~~ 85 (216)
T 2in3_A 6 EKPVLWYIADPMCSWCWGFAPVIENIRQEYSAFLTVKIMPGGLRPGTNTPLLPEKRAQILHHWHSVHITTGQPFTFENAL 85 (216)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEECC----CCSBCCHHHHHHHHHHHHHHHHHHCCCCCCTTCS
T ss_pred cceeEEEEECCCCchhhcchHHHHHHHhcCCCCeEEEEeecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCccChHHHc
Confidence 368999999999999998888888887744457999999987632
Q ss_pred ----CcChHHHHHHHHHHHhcCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCc
Q 029265 97 ----HDNAYATSRALHIVNRTNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDR 172 (196)
Q Consensus 97 ----h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~ 172 (196)
+.++..+++++.++...+++++|+|+++||+.+ |.+. .+.+. .+.|.++|.+ +|++. ++|.+++++.
T Consensus 86 ~~~~~~~s~~a~r~~~~a~~~~~~~~~~~~~~lf~a~--~~~~--~~~~~---~~~l~~~a~~-~Gld~-~~~~~~~~~~ 156 (216)
T 2in3_A 86 PEGFIYDTEPACRGVVSVSLIEPEKVFPFFAAIQRAF--YVGQ--EDVAQ---LAILKKLAVD-LGIPE-SRFTPVFQSD 156 (216)
T ss_dssp CTTCBCCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHH--HTTC--CCTTS---HHHHHHHHHH-TTCCH-HHHHHHHHSH
T ss_pred cCCcccCcHHHHHHHHHHHHhCcchHHHHHHHHHHHH--HhcC--CCCCC---HHHHHHHHHH-cCCCH-HHHHHHhcch
Confidence 356788899888887777789999999999754 2221 13332 3467888888 89995 9999999999
Q ss_pred hhhHHHHHHHHHHhccCcccccCC
Q 029265 173 STDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 173 ~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
.+...++.+.+.+.++||+|||||
T Consensus 157 ~~~~~v~~~~~~a~~~gv~g~Pt~ 180 (216)
T 2in3_A 157 EAKQRTLAGFQRVAQWGISGFPAL 180 (216)
T ss_dssp HHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHHHHHHHcCCcccceE
Confidence 999999999999999999999996
No 19
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=99.84 E-value=2.3e-20 Score=146.81 Aligned_cols=132 Identities=12% Similarity=0.104 Sum_probs=109.4
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCC------------------------------------
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYH------------------------------------ 97 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h------------------------------------ 97 (196)
++|++|+|+.||||+.+++.++++.++|+++|++++|+++|..+
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~~v~v~~~p~~L~~~~~~~~~~~~~~~~~~~~~r~a~~~G~~f~~~~~~~~ 82 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPGVIQFEYVVGGLAPDTNLPMPPEMQQKLEGIWKQIETQLGTKFNYDFWKLC 82 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCTTSEEEEEECCSSCSCCCBCCHHHHHHHHHHHHHHHHHHCCCCCTTHHHHS
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCCCceEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHCCcccHHHHhcC
Confidence 68999999999999999999999999998899999999876321
Q ss_pred ---cChHHHHHHHHHHHhcCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchh
Q 029265 98 ---DNAYATSRALHIVNRTNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRST 174 (196)
Q Consensus 98 ---~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~ 174 (196)
.++..+++++.++...+ ++++|+++||... | .++ .+.+. .+.|.++|.+ +|+|. ++|.+++++..+
T Consensus 83 ~~~~~s~~a~r~~~aa~~~g--~~~~~~~~l~~a~--~-~~~-~~~~~---~~~l~~~a~~-~Gld~-~~~~~~~~s~~~ 151 (208)
T 3kzq_A 83 TPVRSTYQSCRAVIAAGFQD--SYEQMLEAIQHAY--Y-LRA-MPPHE---EATHLQLAKE-IGLNV-QQFKNDMDGTLL 151 (208)
T ss_dssp CCBCCCHHHHHHHHHHHTTT--CHHHHHHHHHHHH--H-TSC-CCTTC---HHHHHHHHHH-TTCCH-HHHHHHHTSHHH
T ss_pred CCcCCcHHHHHHHHHHHHhC--CHHHHHHHHHHHH--H-HcC-CCCCC---HHHHHHHHHH-cCCCH-HHHHHHHhChHH
Confidence 35668889888887654 5799999999753 1 111 13333 3468888989 89995 999999999999
Q ss_pred hHHHHHHHHHHhccCcccccCC
Q 029265 175 DLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 175 ~~~~r~~~k~a~~~GV~GTPtF 196 (196)
...++.+.+.+.++||+|||||
T Consensus 152 ~~~v~~~~~~a~~~gv~g~Pt~ 173 (208)
T 3kzq_A 152 EGVFQDQLSLAKSLGVNSYPSL 173 (208)
T ss_dssp HHHHHHHHHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHHHHHcCCCcccEE
Confidence 9999999999999999999997
No 20
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=99.82 E-value=1.2e-19 Score=144.59 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=109.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCC-----------------------------------CC
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPL-----------------------------------PY 96 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl-----------------------------------~~ 96 (196)
.+++|++|+|+.||||+..++.|+++.+++ ++++++|+|.| |+
T Consensus 4 m~~~I~~~~D~~CP~Cy~~~~~l~~l~~~~--~~~v~~~p~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~r~a~~~G~~~ 81 (226)
T 1r4w_A 4 APRVLELFYDVLSPYSWLGFEVLCRYQHLW--NIKLKLRPALLAGIMKDSGNQPPAMVPHKGQYILKEIPLLKQLFQVPM 81 (226)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHTTTS--SEEEEEEECCHHHHHHHTTCCCTTSSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCceEEEEEeCCChHHHHHHHHHHHHHHHc--CCeEEEEeeecccchhccCCCCcccChHHHHHHHHHHHHHHHHhCCCC
Confidence 358999999999999999999999988876 58999998743 22
Q ss_pred C-----------cChHHHHHHHHHHHhcCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCc--hH
Q 029265 97 H-----------DNAYATSRALHIVNRTNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSY--SS 163 (196)
Q Consensus 97 h-----------~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~--~~ 163 (196)
+ .++..+++++.++...+++++++|+++||... |.+ + .+.+. .+.|.++|.+ +|++. .+
T Consensus 82 ~~~~~~~~~~~~~~s~~a~r~~~aa~~~g~~~~~~~~~alf~a~--~~~-~-~~i~~---~~~L~~~a~~-~Gl~~~d~~ 153 (226)
T 1r4w_A 82 SVPKDFFGEHVKKGTVNAMRFLTAVSMEQPEMLEKVSRELWMRI--WSR-D-EDITE---SQNILSAAEK-AGMATAQAQ 153 (226)
T ss_dssp CCCSSTTTHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHHH--HTS-C-CCCSS---HHHHHHHHHH-TTCCHHHHH
T ss_pred CCCCccccccCCCCCHHHHHHHHHHHhhChHHHHHHHHHHHHHH--hcC-C-CCCCC---HHHHHHHHHH-cCCCchhHH
Confidence 1 15888999999888778788999999999753 222 1 23333 2468888889 89962 46
Q ss_pred HHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 164 ALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 164 ~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
+|.+++++.++...++.+.+.+.++||+|||||
T Consensus 154 ~~~~~~~s~~~~~~v~~~~~~a~~~gv~G~Ptf 186 (226)
T 1r4w_A 154 HLLNKISTELVKSKLRETTGAACKYGAFGLPTT 186 (226)
T ss_dssp HHHTTTTSHHHHHHHHHHHHHHHHTTCCSSCEE
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHCCCCCCCEE
Confidence 899999999999999999999999999999997
No 21
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=99.81 E-value=2.9e-20 Score=145.68 Aligned_cols=130 Identities=15% Similarity=0.126 Sum_probs=103.6
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCC-------------------------------------
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPY------------------------------------- 96 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~------------------------------------- 96 (196)
++|++|+|+.||||+..++.+++++++|. +++++|+++|..
T Consensus 1 m~I~~~~D~~CP~cy~~~~~l~~~~~~~~--~~v~~~p~~L~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~a~~~G~~~ 78 (203)
T 2imf_A 1 MIVDFYFDFLSPFSYLANQRLSKLAQDYG--LTIRYNAIDLARVKIAIGNVGPSNRDLKVKLDYLKVDLQRWAQLYGIPL 78 (203)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHC--CEEEEEECCHHHHHHHHTCCSCCGGGCHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHcC--CeEEEEeeecchhhHhhCCCCcccccChHHHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999885 889999886421
Q ss_pred ----CcChHHHHHHHHHHHhcCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCc
Q 029265 97 ----HDNAYATSRALHIVNRTNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDR 172 (196)
Q Consensus 97 ----h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~ 172 (196)
+.++..+++++.++.. ++++++|+++||+.+ |.+. .+.+.. +.|.++|.+ +|++. ++|.+++++.
T Consensus 79 ~~~~~~~t~~a~r~~~~a~~--~g~~~~~~~~lf~a~--~~~~--~~i~~~---~~L~~~a~~-~Gld~-~~~~~~~~s~ 147 (203)
T 2imf_A 79 VFPANYNSRRMNIGFYYSGA--EAQAAAYVNVVFNAV--WGEG--IAPDLE---SLPALVSEK-LGWDR-SAFEHFLSSN 147 (203)
T ss_dssp CCCSCCCCHHHHHHGGGCCS--HHHHHHHHHHHHHHH--HHSC--CCTTCT---THHHHHHHH-HTCCH-HHHHHHHHSH
T ss_pred CCCCCCChHHHHHHHHHHhC--cChHHHHHHHHHHHH--HcCC--CCCCCH---HHHHHHHHH-cCCCH-HHHHHHhcCH
Confidence 3456666666655543 468999999999763 2221 133322 357788888 89995 9999999999
Q ss_pred hhhHHHHHHHHHHhccCcccccCC
Q 029265 173 STDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 173 ~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
++...++.+.+.+.++||+|||||
T Consensus 148 ~~~~~v~~~~~~a~~~Gv~G~Ptf 171 (203)
T 2imf_A 148 AATERYDEQTHAAIERKVFGVPTM 171 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred HHHHHHHHHHHHHHHCCCCcCCEE
Confidence 999999999999999999999997
No 22
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=99.76 E-value=3.3e-18 Score=134.10 Aligned_cols=134 Identities=16% Similarity=0.134 Sum_probs=109.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCC------------------------------------
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLP------------------------------------ 95 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~------------------------------------ 95 (196)
+.++|+.|+|+.||||+-..+.++++++++ .+++++|+|.|.
T Consensus 3 ~~~~I~~~~D~~cPwcyi~~~~l~~~~~~~--~~~v~~~p~~L~~~~~~~g~~~~~~~~~k~~~~~~~~~r~a~~~G~~f 80 (202)
T 3fz5_A 3 AMNPIEFWFDFSSGYAFFAAQRIEALAAEL--GRTVLWRPYMLGAAFSVTGARGLSSTPLKRDYAQRDWARIARQRGLTF 80 (202)
T ss_dssp CCSCEEEEECTTCHHHHHHHTTHHHHHHHH--TCCEEEEECTTC----------CCSHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCceeEEEEeCCCHHHHHHHHHHHHHHHHh--CCeEEEEeeeccchhhhcCCCCcccCcHHHHHHHHHHHHHHHHhCCCC
Confidence 678999999999999999999999999887 477788876431
Q ss_pred -----CCcChHHHHHHHHHHHhcCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccC
Q 029265 96 -----YHDNAYATSRALHIVNRTNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFS 170 (196)
Q Consensus 96 -----~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~ 170 (196)
+..++..+++++.++...+++++++|+++||... +.++ .+.+. .+.|.++|.+ +|++. ++|.++++
T Consensus 81 ~~~~~~~~~t~~a~r~~~~a~~~g~~~~~~~~~alf~a~---~~~g-~~i~~---~~~L~~~a~~-~Gld~-~~~~~~~~ 151 (202)
T 3fz5_A 81 RPPADHPHVALAATRAFYWIEAQSPDAATAFAQRVFDLY---FSDR-LDTAS---PEAVSRLGPE-VGLEP-EALLAGIA 151 (202)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH---TTTC-CCTTC---HHHHHTTHHH-HTCCH-HHHHHHTT
T ss_pred CCCCCCCCChHHHHHHHHHHHhhCchHHHHHHHHHHHHH---HhcC-CCCCC---HHHHHHHHHH-cCCCH-HHHHHHhc
Confidence 0126778899998888777779999999999752 2222 23333 3578888989 89995 99999999
Q ss_pred CchhhHHHHHHHHHHhccCcccccCC
Q 029265 171 DRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 171 ~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
+.++...++.+.+.+.++||+|||||
T Consensus 152 s~~~~~~v~~~~~~a~~~Gv~GvPtf 177 (202)
T 3fz5_A 152 DPALKETVRKIGEDAVARGIFGSPFF 177 (202)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCSSSEE
T ss_pred CHHHHHHHHHHHHHHHHCCCCcCCEE
Confidence 99999999999999999999999997
No 23
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=99.75 E-value=4.3e-18 Score=137.09 Aligned_cols=117 Identities=15% Similarity=0.141 Sum_probs=89.2
Q ss_pred CCCccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccH
Q 029265 39 YDGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSAT 118 (196)
Q Consensus 39 ~~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~ 118 (196)
.+.+++|+++ +|++|++|+|+.||||+++++.+++++++ ++|+|+++++|+ .|+.|..+++++.|+ .++++|
T Consensus 87 ~~~i~~G~~~---ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~-~~~~s~~~a~a~~~a--~d~~~~ 158 (241)
T 1v58_A 87 SHWLLDGKKD---APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGV-IKPESPATAAAILAS--KDPAKT 158 (241)
T ss_dssp SCCEEESCTT---CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCC-SSTTHHHHHHHHHHS--SSHHHH
T ss_pred CCCceECCCC---CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCc-CCCcHHHHHHHHHHc--cCHHHH
Confidence 4466778754 99999999999999999999999998885 689999999997 578887777766554 357889
Q ss_pred HHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 119 FCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 119 ~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
|++++.+|.+++- +. . .. .+......+..+.+.++++||+|||||
T Consensus 159 ~~~~~~~~~~~~l---------~~------------~-~~-----------~~~~~~~~v~~~~~l~~~~gv~gtPt~ 203 (241)
T 1v58_A 159 WQQYEASGGKLKL---------NV------------P-AN-----------VSTEQMKVLSDNEKLMDDLGANVTPAI 203 (241)
T ss_dssp HHHHHHTTTCCCC---------CC------------C-SS-----------CCHHHHHHHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHhccCCC---------Cc------------c-cc-----------CCHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 9999999876420 00 0 01 122334556677788899999999986
No 24
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=99.74 E-value=9.5e-19 Score=131.08 Aligned_cols=107 Identities=13% Similarity=0.223 Sum_probs=76.7
Q ss_pred CccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCC-CCcChHHHHHHHHHHHhcCCccHH
Q 029265 41 GFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLP-YHDNAYATSRALHIVNRTNSSATF 119 (196)
Q Consensus 41 g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~-~h~~s~~aa~a~~a~~~~~~~~~~ 119 (196)
.+.+++++ ++++|++|+||.||||+++++.+++ + ++|+++++++|++ .|++|..+++++.|+. ++.++|
T Consensus 6 ai~~~~~~---a~~~vv~f~D~~Cp~C~~~~~~l~~----l-~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~--d~~~a~ 75 (147)
T 3gv1_A 6 AIKEVRGN---GKLKVAVFSDPDCPFCKRLEHEFEK----M-TDVTVYSFMMPIAGLHPDAARKAQILWCQP--DRAKAW 75 (147)
T ss_dssp SEEEEETT---CCEEEEEEECTTCHHHHHHHHHHTT----C-CSEEEEEEECCCTTTCTTHHHHHHHHHTSS--SHHHHH
T ss_pred CeeeecCC---CCEEEEEEECCCChhHHHHHHHHhh----c-CceEEEEEEccccccChhHHHHHHHHHcCC--CHHHHH
Confidence 45667755 9999999999999999999998764 4 6899999999996 6899988887776653 455665
Q ss_pred HHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 120 CLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 120 ~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
+ + +|.+.. .+. + + . +| +..++.+.+.++++||+|||||
T Consensus 76 ~--~-~~~~g~---------~~~------------~----~--~---~~------~~~v~~~~~la~~~gI~gtPt~ 113 (147)
T 3gv1_A 76 T--D-WMRKGK---------FPV------------G----G--S---IC------DNPVAETTSLGEQFGFNGTPTL 113 (147)
T ss_dssp H--H-HHHHCC---------CCT------------T----C--C---CC------SCSHHHHHHHHHHTTCCSSCEE
T ss_pred H--H-HHhCCC---------CCC------------c----c--H---HH------HHHHHHHHHHHHHhCCCccCEE
Confidence 3 3 332210 000 0 0 0 12 2346677888899999999996
No 25
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=99.69 E-value=2.8e-16 Score=126.41 Aligned_cols=135 Identities=18% Similarity=0.299 Sum_probs=107.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC--CcEEEEEEecCCC----------------------------------
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG--PHVSLVVHLLPLP---------------------------------- 95 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~--~~v~~~~~~~pl~---------------------------------- 95 (196)
+|++|+.|+|+.||||+-.++.|++++++|. ..+++++|+|-|.
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P~~L~p~~~~~g~~~~~~~~~~k~g~~~~~~~~~~~~~~ 80 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRSFELDPGRAKDDVQPVLTMLTAKYGMSQEQAQAGEDNLG 80 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEECCSCTTCCTTCCEEHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEEeccccCCCCCCCCCHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 3689999999999999999999999998875 3799999987431
Q ss_pred ---------C------CcChHHHHHHHHHHHhcCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCC
Q 029265 96 ---------Y------HDNAYATSRALHIVNRTNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNS 160 (196)
Q Consensus 96 ---------~------h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~ 160 (196)
+ ..++..+++++.++.. .+++++|+++||... +.++ .+.+.. .+.|.++|.+ +|++
T Consensus 81 r~a~~~Gl~f~~~~~~~~nt~~a~r~~~~A~~--~g~~~~~~~alf~a~---~~~g-~~i~d~--~~~L~~~a~~-~Gld 151 (239)
T 3gl5_A 81 AQAAAEGLAYRTRDRDHGSTFDLHRLLHLAKE--RGRHEALLDAFYRGN---FADE-RSVFND--DERLVELAVG-AGLD 151 (239)
T ss_dssp HHHHHTTCCCCCSSCEECCCHHHHHHHHHHHT--TTCHHHHHHHHHHHH---HTCS-SCCSSC--HHHHHHHHHH-TTCC
T ss_pred HHHHHcCCCccCCCCCCCChHHHHHHHHHHHh--hCcHHHHHHHHHHHH---HhcC-CCCCCH--HHHHHHHHHH-cCCC
Confidence 1 1345677787777765 458999999999753 2222 244430 2468888889 8999
Q ss_pred chHHHhhccCC-chhhHHHHHHHHHHhccCcccccCC
Q 029265 161 YSSALESGFSD-RSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 161 ~~~~~~~~~~~-~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
. ++|.+++++ ..+...++.+.+.+.++||+|||||
T Consensus 152 ~-~~~~~~l~s~~~~~~~v~~~~~~a~~~Gv~GvPtf 187 (239)
T 3gl5_A 152 A-EEVRAVLADPAAYADEVRADEREAAQLGATGVPFF 187 (239)
T ss_dssp H-HHHHHHHHCTTTTHHHHHHHHHHHHHTTCCSSSEE
T ss_pred H-HHHHHHHcCcHhHHHHHHHHHHHHHHCCCCeeCeE
Confidence 5 999999999 9999999999999999999999997
No 26
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=99.66 E-value=7.8e-16 Score=123.37 Aligned_cols=135 Identities=15% Similarity=0.186 Sum_probs=106.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCC-----------------------------------CC
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPL-----------------------------------PY 96 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl-----------------------------------~~ 96 (196)
.+.+|+.|+|+.||||+-..+.+.++++.+ .+++++|+|-| ++
T Consensus 4 ~~~~I~~~~D~~CPwcyi~~~~L~~~~~~~--~v~v~~~p~~L~~~~~~~g~~~~~~~~~k~~y~~~~~~r~a~~~G~~f 81 (234)
T 3rpp_A 4 LPRTVELFYDVLSPYSWLGFEILCRYQNIW--NINLQLRPSLITGIMKDSGNKPPGLLPRKGLYMANDLKLLRHHLQIPI 81 (234)
T ss_dssp CCEEEEEEECTTCHHHHHHHHHHHHHTTTS--SEEEEEEECCHHHHCC----CCCSSSCHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCceEEEEEeCCCHHHHHHHHHHHHHHHHc--CCeEEEEEeecchhhhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCC
Confidence 578999999999999999999999988876 58888887522 11
Q ss_pred C------c-----ChHHHHHHHHHHHhcCCccHHHHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCc--hH
Q 029265 97 H------D-----NAYATSRALHIVNRTNSSATFCLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSY--SS 163 (196)
Q Consensus 97 h------~-----~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~--~~ 163 (196)
+ . ++..+++++.++...+++++.+|+++||.. ++.++ .+.+.. +.|.++|.+ +|++. .+
T Consensus 82 ~~~~~~~~~~~~~nt~~a~r~~~aa~~~~~~~~~~~~~al~~A---~~~~g-~di~d~---~~L~~~a~~-~GLd~~~~~ 153 (234)
T 3rpp_A 82 HFPKDFLSVMLEKGSLSAMRFLTAVNLEHPEMLEKASRELWMR---VWSRN-EDITEP---QSILAAAEK-AGMSAEQAQ 153 (234)
T ss_dssp CCCSSCHHHHHHHCSHHHHHHHHHHHHHCGGGHHHHHHHHHHH---HHTSC-CCCSSH---HHHHHHHHH-TTCCHHHHH
T ss_pred CCCCCCcccccCCCCHHHHHHHHHHHHhCcHHHHHHHHHHHHH---HHcCC-CCCCCH---HHHHHHHHH-cCCCHHHHH
Confidence 1 1 677888888888766778999999999963 22222 243433 568888889 89993 15
Q ss_pred HHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 164 ALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 164 ~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
+|.+.+++.++...++.+.+.+.++||+|||||
T Consensus 154 ~~l~~~~s~~~~~~l~~~~~~a~~~Gv~GvPtf 186 (234)
T 3rpp_A 154 GLLEKIATPKVKNQLKETTEAACRYGAFGLPIT 186 (234)
T ss_dssp HHHTTTTSHHHHHHHHHHHHHHHHTTCSSSCEE
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHcCCCCCCEE
Confidence 667777889999999999999999999999997
No 27
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=99.50 E-value=8e-14 Score=109.85 Aligned_cols=107 Identities=13% Similarity=0.139 Sum_probs=71.1
Q ss_pred CccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCC-CCcChHHHHHHHHHHHhcCCccHH
Q 029265 41 GFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLP-YHDNAYATSRALHIVNRTNSSATF 119 (196)
Q Consensus 41 g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~-~h~~s~~aa~a~~a~~~~~~~~~~ 119 (196)
..++|++ +++++|++|+|+.||||+++++.++++.+. +|+++++++|+. .|+.+...+.++ .+. .++++
T Consensus 78 ~~~~g~~---~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~--~~a--~d~~~ 147 (211)
T 1t3b_A 78 MIVYPAK---NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAI--WTA--KDPVF 147 (211)
T ss_dssp SEEECCT---TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHH--HHS--SSHHH
T ss_pred ceEecCC---CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHH--HhC--cCHHH
Confidence 4456764 499999999999999999999999997653 499999999986 466553333322 222 34555
Q ss_pred HHHHHHHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccCcccccCC
Q 029265 120 CLLEWFFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFFSFNTSFF 196 (196)
Q Consensus 120 ~~~~~lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~GV~GTPtF 196 (196)
.|++. |.++. ++. + .| +..+..+.+.++++||+|||||
T Consensus 148 a~~~~-~~~~~----------------------------~~~-~---~~------~~~v~~~~~l~~~~gV~gTPt~ 185 (211)
T 1t3b_A 148 ALNEA-EKGNL----------------------------PKE-V---KT------PNIVKKHYELGIQFGVRGTPSI 185 (211)
T ss_dssp HHHHH-HTTCC----------------------------CSS-C---CC------SSHHHHHHHHHHHHTCCSSCEE
T ss_pred HHHHH-HcCCC----------------------------CCh-H---HH------HHHHHHHHHHHHHcCCCcCCEE
Confidence 55554 33210 110 0 12 2245566778899999999986
No 28
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=99.47 E-value=5.2e-14 Score=111.18 Aligned_cols=78 Identities=10% Similarity=0.126 Sum_probs=57.2
Q ss_pred CCccccCCCCCCCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCC-CCcChHHHHHHHHHHHhcCCccH
Q 029265 40 DGFFYANHPVDSDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLP-YHDNAYATSRALHIVNRTNSSAT 118 (196)
Q Consensus 40 ~g~~~g~~~~~~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~-~h~~s~~aa~a~~a~~~~~~~~~ 118 (196)
+.+++|+++ ++++|++|+|+.||+|+++++.++++.++ +|+++++++|+. .|+.+...+.++.|+ .+.+
T Consensus 77 ~~~~~g~~~---~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a----~d~~ 146 (216)
T 1eej_A 77 EMIVYKAPQ---EKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCA----KDKN 146 (216)
T ss_dssp GSEEECCTT---CCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTS----SSHH
T ss_pred cCeeecCCC---CCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhc----cCHH
Confidence 456677744 89999999999999999999999988763 699999999975 477665444444332 2445
Q ss_pred HHHHHHHHh
Q 029265 119 FCLLEWFFK 127 (196)
Q Consensus 119 ~~~~~~lf~ 127 (196)
..|++.++.
T Consensus 147 ~~~~~~~~~ 155 (216)
T 1eej_A 147 KAFDDVMAG 155 (216)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhC
Confidence 556665543
No 29
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=99.35 E-value=3.1e-12 Score=104.20 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=70.1
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhc------CCccHHHHHHH
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRT------NSSATFCLLEW 124 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~------~~~~~~~~~~~ 124 (196)
+++.+|.+|+||.||||+++++.+++++++ .+| ++..+|+ .++.|...+++..|.... +++.-+..++.
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~~--~~V--r~i~~Pi-lg~~S~~~a~~I~ca~d~~ka~~~~~~~kia~L~~ 220 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLKE--NTV--RMVVVGW-LGVNSAKKAALIQEEMAKARARGASVEDKISILEK 220 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHHH--CEE--EEEECCC-SSHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhhC--CcE--EEEEeec-cCccHHHHHHHHhcCCCccccccCChHHHHHHHHH
Confidence 389999999999999999999999987774 345 4445776 467787777777665321 11122344444
Q ss_pred HHhcChhhhcCCCCCCCHHHHHHHHHHHHHhhcCCCchHHHhhccCCchhhHHHHHHHHHHhccC-cccccCC
Q 029265 125 FFKQQEKFYNAPTQNMTRTAVVKEIVKFAAEGIGNSYSSALESGFSDRSTDLLTRVSFKVTQKFF-SFNTSFF 196 (196)
Q Consensus 125 lf~~q~~~~~~~~~~~t~~~~~~~l~~~A~~~~g~~~~~~~~~~~~~~~~~~~~r~~~k~a~~~G-V~GTPtF 196 (196)
.|+.+. .++ ....+.++...+..+.+...+.| |+|||+.
T Consensus 221 ~~~~~~---------------------------~~p------~~~~~~d~~~~v~~~~~~~~~~G~i~gtP~i 260 (273)
T 3tdg_A 221 IYSTQY---------------------------DIN------AQKEPEDLRTKVENTTKKIFESGVIKGVPFL 260 (273)
T ss_dssp HHSTTC---------------------------CGG------GSCCCHHHHHHHHHHHHHHHSSSSSCSSSEE
T ss_pred HhcccC---------------------------CCC------CCCCchHHHHHHHHHHHHHHHcCCcccCcEE
Confidence 442110 000 01112344556778888899999 9999984
No 30
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.29 E-value=2.5e-12 Score=100.44 Aligned_cols=75 Identities=13% Similarity=0.063 Sum_probs=64.2
Q ss_pred CCeEEEEecCCCChhhhhhchHH---HHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhc
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL---KQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQ 128 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l---~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~ 128 (196)
.+++|++|+||.||||++++|.+ +++.++|+++|+|...+.++..|+.+..+++++.++..++ ++|++|++||+.
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~~~~~~~~~a~a~~aa~~~g--~~~~~~~~lF~a 190 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG--VEDKVTVPLFEG 190 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSSHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcCCccchHHHHHHHHHHHHcC--CHHHhhHHHHHH
Confidence 67899999999999999999998 8999999889988887776543467888899888887664 799999999975
No 31
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.66 E-value=5.8e-05 Score=49.10 Aligned_cols=40 Identities=20% Similarity=0.306 Sum_probs=36.2
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.++|+.|+...||+|+++.|.++++.++|.+++.+...+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~ 42 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINV 42 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEES
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEEC
Confidence 4789999999999999999999999999988898888765
No 32
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.54 E-value=4.6e-05 Score=49.58 Aligned_cols=39 Identities=23% Similarity=0.410 Sum_probs=35.0
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
++|+.|+...||+|+++.|.++++.++|.+++++...+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~ 41 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDI 41 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECT
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 579999999999999999999999999988888887654
No 33
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.28 E-value=0.00055 Score=46.38 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=36.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.|.++++.++|.+++.|...+.
T Consensus 20 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~ 60 (108)
T 2trx_A 20 DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 60 (108)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEET
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEEC
Confidence 57899999999999999999999999999988888876653
No 34
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.26 E-value=0.00057 Score=46.06 Aligned_cols=41 Identities=12% Similarity=0.291 Sum_probs=36.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.+.++.++|.+++.|...+.
T Consensus 20 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~ 60 (107)
T 2i4a_A 20 SGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNI 60 (107)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEET
T ss_pred CCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEEC
Confidence 57899999999999999999999999999988888877654
No 35
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.22 E-value=0.00048 Score=46.34 Aligned_cols=41 Identities=12% Similarity=0.276 Sum_probs=36.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.|.+.++.++|.+++.|...+.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~ 59 (106)
T 3die_A 19 SGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDV 59 (106)
T ss_dssp SSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred CCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEC
Confidence 57889999999999999999999999999988888876653
No 36
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.21 E-value=0.0005 Score=47.00 Aligned_cols=41 Identities=15% Similarity=0.271 Sum_probs=36.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.++++.++|.+++.|...+.
T Consensus 25 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~ 65 (115)
T 1thx_A 25 EQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEI 65 (115)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEES
T ss_pred CceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEc
Confidence 57789999999999999999999999999988888887654
No 37
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.20 E-value=0.00055 Score=46.12 Aligned_cols=41 Identities=17% Similarity=0.256 Sum_probs=35.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.|.++++.++|.+++.+...+.
T Consensus 17 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~ 57 (105)
T 1nsw_A 17 DGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNV 57 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEET
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEEC
Confidence 46789999999999999999999999999988887776653
No 38
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.18 E-value=0.00062 Score=46.01 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.|.++++.++|.+++.+...+.
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~ 59 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNT 59 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEEC
Confidence 56789999999999999999999999999988888776653
No 39
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.14 E-value=0.0007 Score=46.22 Aligned_cols=41 Identities=22% Similarity=0.449 Sum_probs=35.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+++.|...+.
T Consensus 23 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~ 63 (112)
T 1t00_A 23 DKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNI 63 (112)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred CCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEc
Confidence 56789999999999999999999999999987888876653
No 40
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.13 E-value=0.00067 Score=46.10 Aligned_cols=41 Identities=12% Similarity=0.137 Sum_probs=36.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.|.++++.++|.+++.|...+.
T Consensus 22 ~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~ 62 (111)
T 3gnj_A 22 GKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDV 62 (111)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEET
T ss_pred CCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEEC
Confidence 46789999999999999999999999999988888877653
No 41
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.11 E-value=0.0007 Score=45.69 Aligned_cols=41 Identities=10% Similarity=0.151 Sum_probs=36.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.|.+.++.++|.+++.|...+.
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~ 61 (109)
T 3tco_A 21 NKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNV 61 (109)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEET
T ss_pred CCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEcc
Confidence 57889999999999999999999999999988888876653
No 42
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.10 E-value=0.00096 Score=47.32 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=36.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+++.|+..+.
T Consensus 40 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~ 80 (128)
T 2o8v_B 40 DGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNI 80 (128)
T ss_dssp SSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEEC
Confidence 67899999999999999999999999999988888877654
No 43
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.08 E-value=0.00082 Score=45.24 Aligned_cols=41 Identities=15% Similarity=0.298 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.++++.++|.+++.|...+.
T Consensus 18 ~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~ 58 (109)
T 2yzu_A 18 HPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDV 58 (109)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEEC
Confidence 46789999999999999999999999999887888776654
No 44
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.07 E-value=0.00093 Score=44.81 Aligned_cols=40 Identities=13% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+...||+|+.+.+.+.++.++|.+++.+...+
T Consensus 18 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~ 57 (105)
T 1fb6_A 18 EVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLN 57 (105)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEc
Confidence 5678999999999999999999999999988878777654
No 45
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.04 E-value=0.0013 Score=44.16 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=35.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.++++.++|.+++.+...+.
T Consensus 20 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~ 60 (106)
T 1xwb_A 20 GKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDV 60 (106)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEET
T ss_pred CCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEec
Confidence 57889999999999999999999999998877888876653
No 46
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.03 E-value=0.00085 Score=45.71 Aligned_cols=41 Identities=15% Similarity=0.181 Sum_probs=35.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.|.++++.++|.+++.|+..+.
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~ 64 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDV 64 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 46789999999999999999999999999887788776653
No 47
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.02 E-value=0.00088 Score=47.82 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=36.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.+.++.++|.+++.|+..+.
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~ 91 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNV 91 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEEC
Confidence 67899999999999999999999999999988888776553
No 48
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=96.99 E-value=0.0011 Score=46.18 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.+.++.++|.+++.|...+.
T Consensus 31 ~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~ 71 (119)
T 1w4v_A 31 ETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDI 71 (119)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEET
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeC
Confidence 56789999999999999999999999999888888876653
No 49
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=96.99 E-value=0.001 Score=46.52 Aligned_cols=42 Identities=14% Similarity=0.106 Sum_probs=37.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecC
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLP 93 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~p 93 (196)
.+.+|+.|+..-||+|+.+.+.+.++.++|.+++.|+..+.+
T Consensus 26 ~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~ 67 (126)
T 2l57_A 26 GIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLE 67 (126)
T ss_dssp SSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETT
T ss_pred CCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 678999999999999999999999999998778888877643
No 50
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.97 E-value=0.0012 Score=45.56 Aligned_cols=41 Identities=10% Similarity=0.212 Sum_probs=35.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.++++.++|.+++.|...+.
T Consensus 30 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~ 70 (121)
T 2i1u_A 30 NKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDV 70 (121)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 56789999999999999999999999999887888876653
No 51
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=96.96 E-value=0.0012 Score=45.25 Aligned_cols=41 Identities=22% Similarity=0.430 Sum_probs=36.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.+.++++.++|.+++.|...+.
T Consensus 17 ~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~ 57 (112)
T 2voc_A 17 EGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDV 57 (112)
T ss_dssp SSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEC
Confidence 46789999999999999999999999999988888877654
No 52
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.95 E-value=0.0012 Score=45.71 Aligned_cols=41 Identities=12% Similarity=0.125 Sum_probs=35.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.+.++.++|.+++.|...+.
T Consensus 21 ~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~ 61 (122)
T 3aps_A 21 KTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDC 61 (122)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeC
Confidence 56789999999999999999999999999988888776654
No 53
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.95 E-value=0.0012 Score=46.37 Aligned_cols=40 Identities=20% Similarity=0.298 Sum_probs=35.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+++.|...+
T Consensus 35 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd 74 (130)
T 2dml_A 35 DGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVN 74 (130)
T ss_dssp SSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEE
T ss_pred CCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEe
Confidence 5789999999999999999999999999988878777655
No 54
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.94 E-value=0.0011 Score=47.14 Aligned_cols=42 Identities=17% Similarity=0.396 Sum_probs=36.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecC
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLP 93 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~p 93 (196)
++++|+.|+...||+|....+.+.++.++|.++++|+.....
T Consensus 29 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~ 70 (148)
T 2b5x_A 29 EKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMP 70 (148)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECC
T ss_pred CCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcC
Confidence 678999999999999999999999999999877888776653
No 55
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=96.91 E-value=0.0013 Score=46.31 Aligned_cols=42 Identities=19% Similarity=0.331 Sum_probs=37.1
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..+..|+.|+..-||+|+.+.|.++++.++|.+++.++..+.
T Consensus 41 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~ 82 (128)
T 3ul3_B 41 KNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDL 82 (128)
T ss_dssp CCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEG
T ss_pred cCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEEC
Confidence 478899999999999999999999999999888888887653
No 56
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=96.91 E-value=0.0014 Score=46.76 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=36.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+++.|+..+.
T Consensus 38 ~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~ 78 (136)
T 2l5l_A 38 DKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDT 78 (136)
T ss_dssp SSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeC
Confidence 56899999999999999999999999999988888876653
No 57
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.83 E-value=0.0016 Score=46.78 Aligned_cols=41 Identities=17% Similarity=0.417 Sum_probs=36.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.+.++.++|.+++.|...+.
T Consensus 24 ~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~ 64 (140)
T 3hz4_A 24 KKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINI 64 (140)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEET
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEEC
Confidence 57789999999999999999999999999988888887653
No 58
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=96.81 E-value=0.0018 Score=42.99 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=34.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.++++.++|.+ +.+...+.
T Consensus 16 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~ 55 (104)
T 2e0q_A 16 HEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNS 55 (104)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEET
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEEC
Confidence 46789999999999999999999999998876 77776553
No 59
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.77 E-value=0.002 Score=43.18 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=33.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+...||+|+.+.|.++++.++|.+ +.|...+
T Consensus 20 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd 58 (105)
T 3m9j_A 20 DKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVD 58 (105)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEE
T ss_pred CCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEE
Confidence 57899999999999999999999999998865 7666554
No 60
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=96.75 E-value=0.0023 Score=46.73 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=35.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++++|+.|+...||+|....+.+.++.++|. +++|+...
T Consensus 37 gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~ 75 (165)
T 3ha9_A 37 GDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAID 75 (165)
T ss_dssp SSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEE
T ss_pred CCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEE
Confidence 6899999999999999999999999999988 78877654
No 61
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=96.73 E-value=0.0021 Score=47.20 Aligned_cols=42 Identities=21% Similarity=0.321 Sum_probs=37.1
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
+.+..|+.|+..-||+|+.+.|.++++.++|.++++|+..+.
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~ 104 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDT 104 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEET
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeC
Confidence 367789999999999999999999999999988888887664
No 62
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.70 E-value=0.0023 Score=44.87 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=35.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC----CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG----PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~----~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.+.++.++|. +++.|...+.
T Consensus 25 ~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~ 69 (133)
T 1x5d_A 25 EDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDA 69 (133)
T ss_dssp SSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEET
T ss_pred CCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEEC
Confidence 5789999999999999999999999988876 6788876653
No 63
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.70 E-value=0.0023 Score=44.31 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=33.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+ +.|...+
T Consensus 34 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd 72 (122)
T 2vlu_A 34 KKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVD 72 (122)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEE
Confidence 56789999999999999999999999998876 7766554
No 64
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.67 E-value=0.0026 Score=43.03 Aligned_cols=40 Identities=13% Similarity=0.208 Sum_probs=34.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++| +++.|...+.
T Consensus 21 ~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~ 60 (107)
T 1gh2_A 21 SRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDV 60 (107)
T ss_dssp TSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEET
T ss_pred CCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEEC
Confidence 567899999999999999999999999988 5677776553
No 65
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.66 E-value=0.0036 Score=42.47 Aligned_cols=40 Identities=15% Similarity=0.333 Sum_probs=34.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.++++.++|. ++.|...+.
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~ 65 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDV 65 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEc
Confidence 5789999999999999999999999999886 677776553
No 66
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.62 E-value=0.0022 Score=44.31 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=30.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSL 87 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~ 87 (196)
.+..|+.|+..-||+|+.+.|.++++.+++..++.+
T Consensus 29 ~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~ 64 (118)
T 1zma_A 29 KETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYF 64 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred CCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEE
Confidence 456899999999999999999999999888655443
No 67
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.62 E-value=0.0032 Score=44.12 Aligned_cols=41 Identities=22% Similarity=0.401 Sum_probs=35.9
Q ss_pred CCeEEEEecCC-------CChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDP-------VCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~-------~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+-. -||+|+.+.|.++++.++|.+++.|+..+.
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~ 71 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQV 71 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEEC
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEEC
Confidence 56788999999 999999999999999999887888877654
No 68
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=96.59 E-value=0.003 Score=43.60 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=35.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-----cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-----HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-----~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+ ++.|...+.
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~ 70 (121)
T 2djj_A 25 TKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDA 70 (121)
T ss_dssp TSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEET
T ss_pred CCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEEC
Confidence 57889999999999999999999999998876 687776553
No 69
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=96.58 E-value=0.0032 Score=43.50 Aligned_cols=39 Identities=21% Similarity=0.346 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+ ++|+..+
T Consensus 30 ~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd 68 (114)
T 2oe3_A 30 NDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCD 68 (114)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEE
Confidence 56899999999999999999999999998876 7776654
No 70
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.58 E-value=0.0033 Score=42.98 Aligned_cols=39 Identities=15% Similarity=0.338 Sum_probs=33.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+...||+|+.+.+.++++.++|. ++.|...+
T Consensus 26 ~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd 64 (112)
T 1syr_A 26 NELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVD 64 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEE
Confidence 5789999999999999999999999999886 47776654
No 71
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.57 E-value=0.0042 Score=43.78 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=36.4
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~~ 92 (196)
..+.+|+.|+...||+|....+.+.++.++|. ++++|+....
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~ 75 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNL 75 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEEC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEc
Confidence 47889999999999999999999999999987 5788776543
No 72
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.55 E-value=0.0038 Score=42.13 Aligned_cols=40 Identities=15% Similarity=0.180 Sum_probs=34.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..++.|+..-||+|+.+.|.++++.++| +++.|...+.
T Consensus 18 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~ 57 (105)
T 4euy_A 18 QQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILL 57 (105)
T ss_dssp SSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEE
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEEC
Confidence 578999999999999999999999999988 4677776654
No 73
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=96.55 E-value=0.0039 Score=44.47 Aligned_cols=38 Identities=21% Similarity=0.321 Sum_probs=34.2
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|+.|+...||+|+.+.+.++++.++|.+++.|...+.
T Consensus 53 vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~ 90 (140)
T 1v98_A 53 TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNV 90 (140)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEET
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEEC
Confidence 89999999999999999999999999988888877654
No 74
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=96.54 E-value=0.0036 Score=45.10 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=36.7
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..+..|+.|+..-||+|+.+.|.++++.++|.+++.|+..+.
T Consensus 54 ~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~ 95 (148)
T 3p2a_A 54 DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNT 95 (148)
T ss_dssp CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEEC
Confidence 467899999999999999999999999999988888876653
No 75
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=96.53 E-value=0.0037 Score=42.67 Aligned_cols=40 Identities=13% Similarity=0.287 Sum_probs=34.0
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
..+..|+.|+..-||+|+.+.|.++++.++|.+ +.|+..+
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd 62 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLD 62 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEE
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEE
Confidence 367899999999999999999999999998864 7766554
No 76
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=96.52 E-value=0.0031 Score=43.65 Aligned_cols=40 Identities=18% Similarity=0.264 Sum_probs=34.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+ +.|+..+.
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~ 70 (116)
T 3qfa_C 31 DKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDV 70 (116)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEEC
Confidence 67899999999999999999999999998876 77665543
No 77
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.52 E-value=0.0037 Score=42.52 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=33.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.+.++.++|.+ +.|+..+.
T Consensus 24 ~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~ 63 (111)
T 2pu9_C 24 DKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDC 63 (111)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEEC
T ss_pred CCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEec
Confidence 56789999999999999999999999998864 76665543
No 78
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.51 E-value=0.0039 Score=43.77 Aligned_cols=40 Identities=13% Similarity=0.250 Sum_probs=34.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC--CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG--PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~--~~v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.|.++++.++|. +++.|...+
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd 66 (133)
T 2dj3_A 25 KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMD 66 (133)
T ss_dssp TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEEC
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 5789999999999999999999999999887 467776554
No 79
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.51 E-value=0.0035 Score=43.63 Aligned_cols=40 Identities=20% Similarity=0.245 Sum_probs=34.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+.+|+.|+...||+|+...+.+.++.++|. +++|+....
T Consensus 25 ~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~ 64 (136)
T 1zzo_A 25 GKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAG 64 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEEC
T ss_pred CCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeC
Confidence 5778999999999999999999999999887 787776653
No 80
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.49 E-value=0.005 Score=43.18 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=34.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|. ++.|+..+.
T Consensus 38 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~ 77 (124)
T 1xfl_A 38 KTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDT 77 (124)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEEC
Confidence 6789999999999999999999999999886 677776543
No 81
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.49 E-value=0.00044 Score=46.30 Aligned_cols=39 Identities=23% Similarity=0.416 Sum_probs=32.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~ 90 (196)
.+..|+.|+...||+|+.+.+.++++.++|.+++.+...
T Consensus 19 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v 57 (106)
T 2yj7_A 19 DKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKV 57 (106)
Confidence 567899999999999999999999998888766666543
No 82
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.44 E-value=0.0044 Score=41.24 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..++.|+...||+|+.+.+.++++.++|. ++.|...+.
T Consensus 19 ~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~ 58 (104)
T 2vim_A 19 GRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDV 58 (104)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEec
Confidence 5678999999999999999999999998886 677776543
No 83
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.39 E-value=0.0046 Score=42.93 Aligned_cols=40 Identities=13% Similarity=0.210 Sum_probs=34.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++| +++.|+..+.
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~ 62 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDV 62 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEEC
Confidence 567899999999999999999999999988 7788876653
No 84
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.39 E-value=0.0047 Score=42.85 Aligned_cols=40 Identities=15% Similarity=0.222 Sum_probs=33.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+ +.++..+.
T Consensus 37 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~ 76 (124)
T 1faa_A 37 DKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDC 76 (124)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEEC
T ss_pred CCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEec
Confidence 56789999999999999999999999998864 66665543
No 85
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.39 E-value=0.0045 Score=43.65 Aligned_cols=40 Identities=13% Similarity=0.180 Sum_probs=34.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|. ++.|...+.
T Consensus 37 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~ 76 (125)
T 1r26_A 37 DILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDA 76 (125)
T ss_dssp SSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEET
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEEC
Confidence 5678999999999999999999999999884 577776554
No 86
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.39 E-value=0.015 Score=40.09 Aligned_cols=42 Identities=12% Similarity=0.237 Sum_probs=36.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecC
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLP 93 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~p 93 (196)
.+.+|+.|+...||+|....+.+.++.+++.+++.++....+
T Consensus 22 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~ 63 (138)
T 4evm_A 22 GKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSP 63 (138)
T ss_dssp TSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECT
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcC
Confidence 678999999999999999999999999988888888877543
No 87
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.39 E-value=0.0035 Score=44.46 Aligned_cols=40 Identities=10% Similarity=0.276 Sum_probs=33.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc---EEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH---VSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~---v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.+.+.++.++|.++ +.|...+
T Consensus 34 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd 76 (140)
T 2dj1_A 34 KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKID 76 (140)
T ss_dssp CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEe
Confidence 578999999999999999999999998887654 7666544
No 88
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.38 E-value=0.0045 Score=42.31 Aligned_cols=40 Identities=13% Similarity=0.183 Sum_probs=33.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+...||+|+.+.+.++++.++|. ++.|...+.
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~ 67 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDV 67 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEET
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEc
Confidence 4678999999999999999999999999886 577766543
No 89
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.36 E-value=0.0052 Score=38.79 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=29.4
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.|..|.+ -||+|+.+.|.++++.+++.+++.+...+
T Consensus 3 ~v~f~a~-wC~~C~~~~~~l~~~~~~~~~~~~~~~v~ 38 (77)
T 1ilo_A 3 KIQIYGT-GCANCQMLEKNAREAVKELGIDAEFEKIK 38 (77)
T ss_dssp EEEEECS-SSSTTHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEEcC-CChhHHHHHHHHHHHHHHcCCceEEEEec
Confidence 4666665 99999999999999999888777776554
No 90
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.31 E-value=0.0054 Score=42.79 Aligned_cols=39 Identities=23% Similarity=0.277 Sum_probs=34.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++.+|+.|+...||+|....+.+.++.++|. +++|+...
T Consensus 24 ~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~ 62 (136)
T 1lu4_A 24 GKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIA 62 (136)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEE
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEE
Confidence 5789999999999999999999999999987 77777654
No 91
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.0047 Score=42.01 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=32.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|. +++.|...+.
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~ 62 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDA 62 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 5778999999999999999999999988852 4577776653
No 92
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=96.26 E-value=0.0075 Score=43.67 Aligned_cols=41 Identities=22% Similarity=0.417 Sum_probs=35.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|+...||+|....+.+.++.++|.++ +.|+....
T Consensus 34 gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~ 75 (165)
T 3or5_A 34 GKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAV 75 (165)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 678999999999999999999999999999864 87776543
No 93
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.26 E-value=0.0085 Score=42.82 Aligned_cols=42 Identities=19% Similarity=0.301 Sum_probs=35.8
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~~ 92 (196)
.++.+|+.|+...||+|+...+.+.++.++|.+ ++.|+....
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~ 71 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSC 71 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEEC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEc
Confidence 367899999999999999999999999999875 488776543
No 94
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.25 E-value=0.0057 Score=43.80 Aligned_cols=41 Identities=15% Similarity=0.387 Sum_probs=35.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~~ 92 (196)
++++|+.|+...||+|....+.+.++.++|.+ ++.++....
T Consensus 28 gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 69 (153)
T 2l5o_A 28 GKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQ 69 (153)
T ss_dssp TCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEEC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEec
Confidence 67899999999999999999999999998875 488776653
No 95
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.24 E-value=0.0084 Score=43.27 Aligned_cols=41 Identities=10% Similarity=0.024 Sum_probs=36.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+-.-||+|+.+.|.++++.++|.+++.|...+.
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~ 63 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDI 63 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 57889999999999999999999999999988888877654
No 96
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=96.22 E-value=0.0066 Score=43.51 Aligned_cols=41 Identities=15% Similarity=0.377 Sum_probs=35.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~~ 92 (196)
.+.+|+.|+...||+|....+.+.++.++|.+ +++|+....
T Consensus 26 gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~ 67 (151)
T 2f9s_A 26 GKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNV 67 (151)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 67899999999999999999999999998875 588877654
No 97
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.17 E-value=0.007 Score=46.92 Aligned_cols=42 Identities=17% Similarity=0.316 Sum_probs=37.0
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..++.|+.|+..-||+|+.+.|.++++.++|.+++.|+..+.
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~ 70 (222)
T 3dxb_A 29 ADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNI 70 (222)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred cCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEEC
Confidence 367899999999999999999999999999988888877654
No 98
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.15 E-value=0.0061 Score=39.39 Aligned_cols=37 Identities=11% Similarity=-0.034 Sum_probs=30.8
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
+|+.|.-..||+|+++.+.++++.++|. .+.+..++.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~-~i~~~~vdi 38 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD-DFQYQYVDI 38 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS-SCEEEEECH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC-CceEEEEec
Confidence 5888999999999999999999887765 477777653
No 99
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.15 E-value=0.0069 Score=44.03 Aligned_cols=40 Identities=18% Similarity=0.347 Sum_probs=34.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++| +++.|+..+.
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~ 71 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEA 71 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEET
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEEC
Confidence 577899999999999999999999999988 4677776653
No 100
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=96.13 E-value=0.0078 Score=43.03 Aligned_cols=41 Identities=17% Similarity=0.391 Sum_probs=35.5
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~ 91 (196)
..+++|+.|+...||+|....+.+.++.++|.++ ++++...
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~ 68 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVN 68 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 3678999999999999999999999999988764 8887764
No 101
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=96.10 E-value=0.0056 Score=41.83 Aligned_cols=40 Identities=15% Similarity=0.102 Sum_probs=33.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|. +++|...+.
T Consensus 19 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~ 58 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDS 58 (110)
T ss_dssp CSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEG
T ss_pred CCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcC
Confidence 4678999999999999999999999988875 577766543
No 102
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.10 E-value=0.0067 Score=41.67 Aligned_cols=38 Identities=18% Similarity=0.377 Sum_probs=32.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.|.++++.++| ++.|...+
T Consensus 33 ~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd 70 (117)
T 2xc2_A 33 NKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVD 70 (117)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEE
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEE
Confidence 677899999999999999999999998887 56666554
No 103
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.05 E-value=0.0033 Score=43.75 Aligned_cols=40 Identities=13% Similarity=0.202 Sum_probs=34.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~ 91 (196)
.+..|+.|+...||+|+.+.+.++++.++|.++ +.|...+
T Consensus 33 ~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd 73 (121)
T 2j23_A 33 DKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVD 73 (121)
T ss_dssp SSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEE
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEE
Confidence 567899999999999999999999998887655 7777654
No 104
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.05 E-value=0.01 Score=39.95 Aligned_cols=40 Identities=15% Similarity=0.233 Sum_probs=32.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC---CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG---PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~---~~v~~~~~~ 91 (196)
.+..|+.|+...||+|+.+.|.+.++.+++. +++.+...+
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd 63 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVD 63 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEE
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEe
Confidence 3578999999999999999999999988765 356666554
No 105
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=96.04 E-value=0.0032 Score=40.69 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=29.0
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
+++.|+-..||+|+.+.+.++++++++. +++.++..
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~~v 38 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSK--YTVEIVHL 38 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTT--EEEEEEET
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcC--CeEEEEEe
Confidence 5788999999999999999999888764 55555544
No 106
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=96.04 E-value=0.0065 Score=43.02 Aligned_cols=42 Identities=17% Similarity=0.295 Sum_probs=36.1
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhc-CCc-EEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHY-GPH-VSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y-~~~-v~~~~~~~ 92 (196)
.++.+|+.|+...||+|....+.+.++.++| .++ +.|+....
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~ 75 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISL 75 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEEC
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEEC
Confidence 4689999999999999999999999999999 654 88776543
No 107
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=96.03 E-value=0.0069 Score=43.89 Aligned_cols=43 Identities=16% Similarity=0.212 Sum_probs=36.5
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEecC
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHLLP 93 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~~p 93 (196)
..+++|+.|+..-||+|+...|.+.++.++|. ..++|+....+
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~ 80 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASP 80 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcC
Confidence 36789999999999999999999999998874 46888877654
No 108
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=96.03 E-value=0.011 Score=42.38 Aligned_cols=41 Identities=12% Similarity=0.174 Sum_probs=35.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|...-||.|....+.+.++.++|.++ ++|+....
T Consensus 29 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 70 (152)
T 2lrn_A 29 GKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVST 70 (152)
T ss_dssp TSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEc
Confidence 678999999999999999999999999998864 88776543
No 109
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.03 E-value=0.0071 Score=48.39 Aligned_cols=40 Identities=13% Similarity=0.106 Sum_probs=35.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+.+|+.|+-.-||+|+.+.|.++++.++|.+++.|+..+
T Consensus 26 ~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd 65 (287)
T 3qou_A 26 TTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLD 65 (287)
T ss_dssp TSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEE
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 6788999999999999999999999999998878777654
No 110
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=95.96 E-value=0.0058 Score=43.28 Aligned_cols=42 Identities=14% Similarity=0.214 Sum_probs=36.0
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
.++++|+.|....||+|....+.+.++.++|.++ +.|+....
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~ 72 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANI 72 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEe
Confidence 3678999999999999999999999999998765 87776643
No 111
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=95.94 E-value=0.013 Score=42.66 Aligned_cols=41 Identities=7% Similarity=0.011 Sum_probs=36.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+-.-||.|+.+.|.++++.++|.+++.|...+.
T Consensus 23 ~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~ 63 (149)
T 3gix_A 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDV 63 (149)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEEC
Confidence 57899999999999999999999999999988888776654
No 112
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=95.91 E-value=0.014 Score=43.52 Aligned_cols=41 Identities=17% Similarity=0.260 Sum_probs=35.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
++++|+.|....||.|....+.+.++.++|.++++|+....
T Consensus 33 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~ 73 (188)
T 2cvb_A 33 EPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINA 73 (188)
T ss_dssp SSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEEC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEc
Confidence 68899999999999999999999999999987776665543
No 113
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.91 E-value=0.014 Score=41.97 Aligned_cols=42 Identities=12% Similarity=0.278 Sum_probs=36.4
Q ss_pred CCeEEEEecCCCChhhhh-hchHHHHHHHhcCCc-EEEEEEecC
Q 029265 52 DAIIIEAFFDPVCPDSRD-AWPPLKQALQHYGPH-VSLVVHLLP 93 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~-~~~~l~~~~~~y~~~-v~~~~~~~p 93 (196)
++++|+.|...-||+|.. ..+.+.++.++|.++ +.|+.....
T Consensus 30 gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~ 73 (160)
T 3lor_A 30 GKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV 73 (160)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred CCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc
Confidence 678999999999999999 599999999999864 888877654
No 114
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=95.89 E-value=0.01 Score=42.00 Aligned_cols=40 Identities=20% Similarity=0.295 Sum_probs=33.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|. ++.|+..+.
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~ 85 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDV 85 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEET
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeC
Confidence 5678899999999999999999999999884 577776553
No 115
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=95.89 E-value=0.016 Score=41.41 Aligned_cols=40 Identities=15% Similarity=0.364 Sum_probs=35.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++.+|+.|+...||+|....+.+.++.++|.+ ++.|+...
T Consensus 28 gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~ 68 (154)
T 3kcm_A 28 GQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVS 68 (154)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 67899999999999999999999999999876 67777654
No 116
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=95.84 E-value=0.0077 Score=41.00 Aligned_cols=40 Identities=15% Similarity=0.300 Sum_probs=32.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC---CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG---PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~---~~v~~~~~~ 91 (196)
.+..|+.|+...||+|+.+.+.+.++.++|. .++.+...+
T Consensus 24 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd 66 (120)
T 1mek_A 24 HKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVD 66 (120)
T ss_dssp CSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEE
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEc
Confidence 5678999999999999999999999988876 346655544
No 117
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.83 E-value=0.0086 Score=41.67 Aligned_cols=37 Identities=16% Similarity=0.300 Sum_probs=32.1
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
.|+.|+..-||+|+.+.|.+.++.++|.+ ++.|...+
T Consensus 25 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd 62 (126)
T 1x5e_A 25 WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVD 62 (126)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEE
Confidence 78999999999999999999999988875 67777654
No 118
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=95.80 E-value=0.011 Score=45.27 Aligned_cols=41 Identities=12% Similarity=0.243 Sum_probs=35.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+++.|...+.
T Consensus 114 ~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~ 154 (210)
T 3apq_A 114 GELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNC 154 (210)
T ss_dssp SCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEET
T ss_pred CCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEEC
Confidence 56789999999999999999999999999888888876653
No 119
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=95.76 E-value=0.019 Score=40.59 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=34.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC--CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG--PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~--~~v~~~~~~ 91 (196)
.+.+|+.|...-||+|+...+.+.++.++|. +++.++...
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~ 69 (144)
T 1o73_A 28 GKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLIS 69 (144)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred CCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Confidence 6789999999999999999999999999887 478777654
No 120
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=95.75 E-value=0.016 Score=44.61 Aligned_cols=41 Identities=15% Similarity=-0.091 Sum_probs=35.0
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
+.++.|+.|+.+.||+|+.+.|.++++.++| +++.+...+.
T Consensus 135 ~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~ 175 (229)
T 2ywm_A 135 DIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDA 175 (229)
T ss_dssp CSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEG
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEEC
Confidence 3678899999999999999999999999888 5788776653
No 121
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=95.73 E-value=0.02 Score=40.60 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=34.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC--CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG--PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~--~~v~~~~~~ 91 (196)
++++|+.|.-.-||.|+...+.+.++.++|. +++.++...
T Consensus 28 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~ 69 (144)
T 1i5g_A 28 GKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLIS 69 (144)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Confidence 5789999999999999999999999999987 478777654
No 122
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.65 E-value=0.012 Score=41.74 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
.+..|+.|+-.-||+|+.+.|.+.++.++|.+ ++.|...+
T Consensus 26 ~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd 66 (137)
T 2dj0_A 26 RVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVD 66 (137)
T ss_dssp TSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 44789999999999999999999999999975 77776543
No 123
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=95.61 E-value=0.0069 Score=42.59 Aligned_cols=41 Identities=17% Similarity=0.150 Sum_probs=35.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHH--HHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLK--QALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~--~~~~~y~~~v~~~~~~~ 92 (196)
.+.+|+.|.-.-||+|+.+.|.+. ++.++|.+++.++..+.
T Consensus 29 ~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~ 71 (133)
T 3fk8_A 29 HKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDV 71 (133)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEEC
T ss_pred CCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeC
Confidence 567899999999999999999999 88888867788877665
No 124
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.60 E-value=0.016 Score=44.43 Aligned_cols=39 Identities=8% Similarity=0.083 Sum_probs=33.8
Q ss_pred CCeEEEEecCC-CChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDP-VCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~-~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+++|+.|+++ .||+|+.+.|.++++.+. .++|+|...+
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd 61 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVD 61 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEE
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEe
Confidence 68999999999 999999999999998764 5688888765
No 125
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=95.60 E-value=0.0099 Score=42.59 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=33.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+++|+.|+...||+|....+.+.++.++ +++.|+....
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~ 80 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINY 80 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEE
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEEC
Confidence 67899999999999999999999988775 6688877654
No 126
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=95.59 E-value=0.024 Score=40.36 Aligned_cols=40 Identities=18% Similarity=0.320 Sum_probs=34.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC--CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG--PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~--~~v~~~~~~ 91 (196)
++++|+.|.-.-||+|+...+.+.++.++|. +++.++...
T Consensus 28 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~ 69 (146)
T 1o8x_A 28 GKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCT 69 (146)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred CCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEe
Confidence 6788999999999999999999999999987 478777664
No 127
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.58 E-value=0.023 Score=40.38 Aligned_cols=39 Identities=10% Similarity=0.151 Sum_probs=33.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+-.-||+|+.+.|.++++.++|. +++|+..+
T Consensus 30 ~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd 68 (135)
T 2dbc_A 30 DLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAI 68 (135)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEEC
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEE
Confidence 4689999999999999999999999999885 57776554
No 128
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=95.56 E-value=0.016 Score=44.40 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=35.2
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC----CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG----PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~----~~v~~~~~~~ 92 (196)
.++.|+.|+..-||+|+.+.|.+.++.++|. +++.+...+.
T Consensus 134 ~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~ 178 (226)
T 1a8l_A 134 QDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEA 178 (226)
T ss_dssp SCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEG
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEc
Confidence 6777999999999999999999999988886 5788776643
No 129
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=95.55 E-value=0.0045 Score=43.16 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=32.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+...||+|+.+.+.++++.++|. ++.|+..+
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~ 74 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVD 74 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEe
Confidence 5678999999999999999999999999886 56666543
No 130
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=95.50 E-value=0.026 Score=40.42 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=35.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~~ 92 (196)
++++|+.|+..-||+|....+.+.++.++|. .++.++....
T Consensus 24 gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~ 65 (151)
T 3raz_A 24 APVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIAL 65 (151)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEES
T ss_pred CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 6889999999999999999999999999885 4688776653
No 131
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=95.44 E-value=0.028 Score=40.57 Aligned_cols=40 Identities=18% Similarity=0.474 Sum_probs=34.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
++.+|+.|+...||+|....+.+.++.++|. .++.|+...
T Consensus 41 gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~ 81 (158)
T 3hdc_A 41 GKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVN 81 (158)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEe
Confidence 6789999999999999999999999999987 567777654
No 132
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=95.41 E-value=0.028 Score=41.25 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=35.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC--cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP--HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~--~v~~~~~~ 91 (196)
++++|+.|.-.-||.|+...|.+.++.++|.+ ++.|+...
T Consensus 48 gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~ 89 (165)
T 3s9f_A 48 GKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILAS 89 (165)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred CCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 67899999999999999999999999999875 67777654
No 133
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=95.31 E-value=0.016 Score=41.08 Aligned_cols=38 Identities=8% Similarity=0.006 Sum_probs=32.6
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..++.|.+. |+.|+.+.|.++++.++|.|+++|...+.
T Consensus 25 pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~ 62 (133)
T 2djk_A 25 PLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDA 62 (133)
T ss_dssp CEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECT
T ss_pred CEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEch
Confidence 356677777 99999999999999999999999988763
No 134
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=95.30 E-value=0.028 Score=39.16 Aligned_cols=41 Identities=7% Similarity=-0.116 Sum_probs=33.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhc-----CCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHY-----GPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y-----~~~v~~~~~~~ 92 (196)
.+..++.|+-.-||+|+.+.|.++++.++| .+++.|.-.+.
T Consensus 33 ~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~ 78 (127)
T 3h79_A 33 EKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDG 78 (127)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEET
T ss_pred CCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEc
Confidence 678999999999999999999999987654 35677776653
No 135
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.28 E-value=0.024 Score=44.28 Aligned_cols=41 Identities=12% Similarity=0.072 Sum_probs=36.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC---cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP---HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~---~v~~~~~~~ 92 (196)
.+..|+.|+-.-||+|+.+.|.++++.++|.+ ++.|...+.
T Consensus 30 ~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~ 73 (244)
T 3q6o_A 30 RSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDC 73 (244)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEET
T ss_pred CCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeC
Confidence 47899999999999999999999999998876 788887664
No 136
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=95.20 E-value=0.037 Score=39.68 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=36.2
Q ss_pred CCeEEEEecCCCChhhhhh-chHHHHHHHhcC-CcEEEEEEecC
Q 029265 52 DAIIIEAFFDPVCPDSRDA-WPPLKQALQHYG-PHVSLVVHLLP 93 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~-~~~l~~~~~~y~-~~v~~~~~~~p 93 (196)
++++|+.|+..-||+|... .+.+.++.++|. .++.|+.....
T Consensus 28 gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~ 71 (158)
T 3eyt_A 28 GKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV 71 (158)
T ss_dssp TSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred CCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec
Confidence 6789999999999999996 999999999998 46888876654
No 137
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=95.10 E-value=0.042 Score=40.87 Aligned_cols=41 Identities=10% Similarity=0.030 Sum_probs=36.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.++.|+-|.-.-||-|+.+.|.++++.++|.+++.|.-.+.
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDV 81 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDI 81 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEET
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEEC
Confidence 56899999999999999999999999999998898877664
No 138
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=94.09 E-value=0.0037 Score=43.77 Aligned_cols=39 Identities=8% Similarity=0.131 Sum_probs=31.6
Q ss_pred CCeEEEEecCCCChhhhhhchHH---HHHHHhcCCcEEEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL---KQALQHYGPHVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l---~~~~~~y~~~v~~~~~ 90 (196)
.+.+|+.|+..-||+|+.+.|.+ +++.+.+.+++.++..
T Consensus 19 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~v 60 (130)
T 2lst_A 19 GRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASV 60 (130)
Confidence 57789999999999999999998 7777776665655543
No 139
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=95.05 E-value=0.031 Score=39.23 Aligned_cols=38 Identities=11% Similarity=0.113 Sum_probs=32.8
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
+..|+.|+..-|+.|+.+.|.++++.++|+ +++|.-.+
T Consensus 24 ~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd 61 (118)
T 3evi_A 24 VWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAI 61 (118)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEE
T ss_pred CeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEE
Confidence 478899999999999999999999999986 57776554
No 140
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=95.00 E-value=0.025 Score=41.15 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=32.4
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..+++|+.|+...||+|+...|.+.++.++ +++++....
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~ 88 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNY 88 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEEC
Confidence 467899999999999999999999988875 577766553
No 141
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=94.94 E-value=0.022 Score=40.34 Aligned_cols=38 Identities=24% Similarity=0.202 Sum_probs=30.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.|.++++.++| ++.|+..+
T Consensus 40 ~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd 77 (133)
T 3cxg_A 40 NSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDID 77 (133)
T ss_dssp CSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEE
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEe
Confidence 578999999999999999999998887776 45555443
No 142
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=94.89 E-value=0.025 Score=41.15 Aligned_cols=40 Identities=13% Similarity=0.100 Sum_probs=31.8
Q ss_pred CCeEEEEecCCC-ChhhhhhchHHHHHHHhcCCc-EEEEEEe
Q 029265 52 DAIIIEAFFDPV-CPDSRDAWPPLKQALQHYGPH-VSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~-CP~C~~~~~~l~~~~~~y~~~-v~~~~~~ 91 (196)
.++.|.-+.++- |+.|+.+.|.++++.++|.|+ ++|.-.+
T Consensus 35 ~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVd 76 (140)
T 2qgv_A 35 PDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIAD 76 (140)
T ss_dssp SSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECC
T ss_pred CCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEE
Confidence 455555555653 999999999999999999998 9988654
No 143
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=94.80 E-value=0.029 Score=40.05 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=33.7
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
+.+|+.|+..-||+|....+.+.++.++| +++|+....
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~ 68 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISR 68 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEEC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeC
Confidence 78999999999999999999999999998 677776654
No 144
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=94.73 E-value=0.029 Score=41.55 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=33.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-E------EEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-V------SLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v------~~~~~~ 91 (196)
.+++|+.|+-..||+|....+.+.++.++|.++ + .|+...
T Consensus 59 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~ 105 (183)
T 3lwa_A 59 NQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGIN 105 (183)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEE
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEE
Confidence 678999999999999999999999998888643 6 666554
No 145
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=94.71 E-value=0.033 Score=43.87 Aligned_cols=41 Identities=17% Similarity=0.077 Sum_probs=34.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC----CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG----PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~----~~v~~~~~~~ 92 (196)
.++.|+.|+-+.||+|+...|.+.++.++|. ++|.+...+.
T Consensus 138 ~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~ 182 (243)
T 2hls_A 138 GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEA 182 (243)
T ss_dssp SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEET
T ss_pred CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEEC
Confidence 5788999999999999999999999988872 5687776553
No 146
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=94.61 E-value=0.043 Score=39.50 Aligned_cols=40 Identities=10% Similarity=0.063 Sum_probs=34.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~ 91 (196)
++++|+.|+..-||.|....+.+.++.++|.++ +.++...
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~ 75 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQIS 75 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 578899999999999999999999999998764 7777654
No 147
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=94.52 E-value=0.066 Score=37.81 Aligned_cols=41 Identities=15% Similarity=0.282 Sum_probs=35.0
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
.++++|+.|.---||.|....+.+.++.++|.+ ++.|+...
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs 72 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSIS 72 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEE
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEE
Confidence 368899999999999999999999999999974 57777654
No 148
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=94.46 E-value=0.073 Score=39.37 Aligned_cols=41 Identities=15% Similarity=0.342 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~~ 92 (196)
++++|+.|...-||.|....+.+.++.++|. .+++++....
T Consensus 60 gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 101 (186)
T 1jfu_A 60 GKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINI 101 (186)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEEC
T ss_pred CCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEEC
Confidence 6789999999999999999999999999887 5788887654
No 149
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=94.45 E-value=0.045 Score=38.56 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=32.5
Q ss_pred CCeEEEEecCCCChhhhhhchHH---HHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL---KQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l---~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.+.+ .++.++|.+ +.++..+.
T Consensus 31 ~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~ 73 (134)
T 2fwh_A 31 GKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANV 73 (134)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEEC
T ss_pred CCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeC
Confidence 56789999999999999999988 788887764 77766554
No 150
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=94.41 E-value=0.037 Score=38.94 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=33.4
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHH---HHHhcCC-cEEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQ---ALQHYGP-HVSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~---~~~~y~~-~v~~~~~~ 91 (196)
.++++|+.|...-||+|....|.+.+ +.++|.+ ++.++...
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~ 70 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIY 70 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEE
Confidence 36889999999999999999998887 7777753 47777654
No 151
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=94.38 E-value=0.018 Score=40.26 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=29.5
Q ss_pred CCeEEEEecCCCCh--------------hhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCP--------------DSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP--------------~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-|| +|+.+.|.++++.++|.+++.|...+.
T Consensus 21 ~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~ 75 (123)
T 1oaz_A 21 DGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNI 75 (123)
T ss_dssp SSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEET
T ss_pred CCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 67899999999999 999999999998888887777776553
No 152
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=94.34 E-value=0.03 Score=39.58 Aligned_cols=37 Identities=30% Similarity=0.583 Sum_probs=31.7
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..|+.|+..-||+|+.+.|.+.++.++|. +.|+..+.
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~ 69 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIW 69 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEE
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEEC
Confidence 68999999999999999999999998875 66666554
No 153
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=94.31 E-value=0.054 Score=44.02 Aligned_cols=41 Identities=12% Similarity=0.245 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+-.-||+|+.+.|.+.++.++|.+++.|.....
T Consensus 35 ~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~ 75 (298)
T 3ed3_A 35 NYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNC 75 (298)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEc
Confidence 56789999999999999999999999999988788777654
No 154
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=94.21 E-value=0.052 Score=40.48 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=33.4
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEec
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHLL 92 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~~ 92 (196)
.+|+.|...-||.|....+.+.++.++|.+ +++|+....
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~ 87 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINS 87 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEEC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 589999999999999999999999998875 387776654
No 155
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=94.18 E-value=0.066 Score=37.73 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=34.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHH---HHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQ---ALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~---~~~~y~-~~v~~~~~~ 91 (196)
++.+|+.|...-||+|+...|.+.+ +.++|. .++.++...
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~ 74 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIY 74 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEE
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEE
Confidence 6889999999999999999999999 888885 467777643
No 156
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=94.18 E-value=0.079 Score=43.67 Aligned_cols=41 Identities=15% Similarity=0.309 Sum_probs=34.7
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCc--EEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH--VSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~--v~~~~~~ 91 (196)
..+..++.|+.+-|++|+++.|.+.++.++|.++ +.+...+
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd 308 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMD 308 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEE
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEE
Confidence 4678999999999999999999999999988764 6666544
No 157
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=94.15 E-value=0.057 Score=41.90 Aligned_cols=39 Identities=10% Similarity=0.057 Sum_probs=34.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+..-||+|+.+.|.+.++.++|. +|+|.-.+
T Consensus 120 ~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd 158 (217)
T 2trc_P 120 VTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIR 158 (217)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEE
T ss_pred CcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEE
Confidence 4789999999999999999999999999885 67777654
No 158
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=94.07 E-value=0.071 Score=42.35 Aligned_cols=39 Identities=10% Similarity=0.002 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..|+.|+-.-||+|+.+.|.+.++.++|.+ |+|+-.+
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd 171 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIK 171 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEE
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEe
Confidence 67899999999999999999999999999874 7776554
No 159
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=93.95 E-value=0.092 Score=39.04 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=33.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.++.|+.|.-.-||.|+...|.+.++.++|+ ++.|+...
T Consensus 54 ~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~ 92 (167)
T 1z6n_A 54 RRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIIS 92 (167)
T ss_dssp SCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEEC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEE
Confidence 5788999999999999999999999988875 67777653
No 160
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=93.95 E-value=0.077 Score=38.37 Aligned_cols=41 Identities=7% Similarity=0.257 Sum_probs=35.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|.-.-||.|....+.+.++.++|.++ ++++....
T Consensus 32 gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~ 73 (170)
T 2p5q_A 32 GKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPC 73 (170)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEEC
Confidence 678899999999999999999999999988764 88776654
No 161
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=93.94 E-value=0.053 Score=41.73 Aligned_cols=40 Identities=10% Similarity=0.253 Sum_probs=33.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc---EEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH---VSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~---v~~~~~~ 91 (196)
.+..++.|+-.-||+|+.+.|.+.++.++|.++ +.+...+
T Consensus 32 ~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd 74 (241)
T 3idv_A 32 KDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKID 74 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEE
T ss_pred CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEe
Confidence 578999999999999999999999998887654 7766554
No 162
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=93.86 E-value=0.11 Score=35.29 Aligned_cols=39 Identities=15% Similarity=0.291 Sum_probs=32.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.++.|+.|+-.-|+.|+.+.|.++++.++|. ++.|.-.+
T Consensus 20 ~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd 58 (105)
T 3zzx_A 20 NKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVD 58 (105)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEE
T ss_pred CCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEe
Confidence 4688999999999999999999999988876 46555443
No 163
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=93.69 E-value=0.08 Score=39.27 Aligned_cols=41 Identities=15% Similarity=0.304 Sum_probs=35.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|.-.-||.|....|.+.++.++|.++ ++++....
T Consensus 49 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~ 90 (181)
T 2p31_A 49 GSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPC 90 (181)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEEC
Confidence 678999999999999999999999999998754 88776643
No 164
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=93.56 E-value=0.055 Score=39.10 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=23.0
Q ss_pred EEEEe-cCC-CChhhhhhchHHHHHHHhcCCcEE--EEEE
Q 029265 55 IIEAF-FDP-VCPDSRDAWPPLKQALQHYGPHVS--LVVH 90 (196)
Q Consensus 55 tI~~f-~D~-~CP~C~~~~~~l~~~~~~y~~~v~--~~~~ 90 (196)
.|+.| .+. .||.|+.+.|.++++.++| ++++ |.-.
T Consensus 37 ~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~V 75 (142)
T 2es7_A 37 GVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVA 75 (142)
T ss_dssp EEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEE
T ss_pred EEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEE
Confidence 44445 444 3999999999999999999 8887 5543
No 165
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=93.56 E-value=0.098 Score=37.75 Aligned_cols=41 Identities=5% Similarity=0.073 Sum_probs=35.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~~ 92 (196)
++++|+.|.---||.|....+.+.++.++|.+ .++++....
T Consensus 31 gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 72 (169)
T 2v1m_A 31 GHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPC 72 (169)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 67899999999999999999999999998875 488776654
No 166
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=93.55 E-value=0.13 Score=39.49 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=34.7
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
+++|+.|.-.-||.|....+.+.++.++|.++ +.|+....
T Consensus 60 ~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~ 100 (218)
T 3u5r_E 60 PALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINS 100 (218)
T ss_dssp SEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred CeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 36899999999999999999999999999864 88887654
No 167
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=93.53 E-value=0.032 Score=38.76 Aligned_cols=37 Identities=11% Similarity=0.214 Sum_probs=27.7
Q ss_pred CCeEEEEecCCCChhhhhhchHH---HHHHHhcCCcEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL---KQALQHYGPHVSLV 88 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l---~~~~~~y~~~v~~~ 88 (196)
.+..|+.|+..-||+|+.+.+.+ +.+.+.+.+++.++
T Consensus 27 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~ 66 (130)
T 2kuc_A 27 DKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNL 66 (130)
T ss_dssp SSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEE
T ss_pred CCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEE
Confidence 56799999999999999999988 55555444444444
No 168
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=93.51 E-value=0.054 Score=37.49 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=31.6
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..+|+.|.-..||.|..+.+.|+++.+++. ++|...+.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDI 66 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINI 66 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEET
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEEC
Confidence 457999999999999999999999988874 66665553
No 169
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=93.32 E-value=0.14 Score=36.30 Aligned_cols=41 Identities=10% Similarity=0.239 Sum_probs=35.3
Q ss_pred CCeEEEEecCCCChh--hhhhchHHHHHHHhc-CCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPD--SRDAWPPLKQALQHY-GPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~--C~~~~~~l~~~~~~y-~~~-v~~~~~~~ 92 (196)
++++|+.|.-.-||. |....+.+.++.++| .++ +.|+....
T Consensus 33 gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~ 77 (150)
T 3fw2_A 33 QKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISL 77 (150)
T ss_dssp TSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEc
Confidence 688999999999999 999999999999999 654 88776643
No 170
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=93.27 E-value=0.12 Score=37.57 Aligned_cols=40 Identities=5% Similarity=-0.002 Sum_probs=33.6
Q ss_pred CCeEEEEecCCC-ChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPV-CPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~-CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
++.+|+.|.-.. ||.|....+.+.++.++| ++++++....
T Consensus 44 gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~ 84 (167)
T 2jsy_A 44 GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISA 84 (167)
T ss_dssp TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEEC
T ss_pred CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEEC
Confidence 467888888776 999999999999999999 7788887653
No 171
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=93.18 E-value=0.093 Score=39.23 Aligned_cols=41 Identities=5% Similarity=0.156 Sum_probs=35.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|...-||.|....+.+.++.++|.++ ++++....
T Consensus 48 Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 89 (190)
T 2vup_A 48 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPC 89 (190)
T ss_dssp TSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEEC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEc
Confidence 578999999999999999999999999988754 87776643
No 172
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=93.12 E-value=0.11 Score=38.42 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=35.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~~ 92 (196)
++++|+.|.-.-||.|....+.+.++.++|.+ .+.|+....
T Consensus 47 gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 88 (183)
T 2obi_A 47 GFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPC 88 (183)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 67899999999999999999999999999875 487776643
No 173
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=93.11 E-value=0.083 Score=37.95 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=34.4
Q ss_pred CCeEEEEecCCCChh-hhhhchHHHHHHHhcCC-----cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPD-SRDAWPPLKQALQHYGP-----HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~-C~~~~~~l~~~~~~y~~-----~v~~~~~~~ 92 (196)
++++|+.|.-..||. |....+.+.++.++|.+ +++++....
T Consensus 23 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~ 69 (164)
T 2ggt_A 23 GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISI 69 (164)
T ss_dssp TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEES
T ss_pred CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEe
Confidence 678999999999997 99999999999888752 788777653
No 174
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=93.10 E-value=0.15 Score=37.72 Aligned_cols=41 Identities=15% Similarity=0.284 Sum_probs=35.1
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~ 91 (196)
.++++|+.|.---||.|....|.+.++.++|.++ +.++...
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is 78 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP 78 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 3678999999999999999999999999999864 7777654
No 175
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=93.05 E-value=0.094 Score=40.27 Aligned_cols=41 Identities=20% Similarity=0.361 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC---cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP---HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~---~v~~~~~~~ 92 (196)
.+..++.|+..-||+|+.+.|.+.++.++|.+ ++.|...+.
T Consensus 147 ~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~ 190 (241)
T 3idv_A 147 ADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDA 190 (241)
T ss_dssp CSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEET
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEEC
Confidence 56899999999999999999999999888754 377776543
No 176
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=93.03 E-value=0.15 Score=36.91 Aligned_cols=41 Identities=24% Similarity=0.414 Sum_probs=35.3
Q ss_pred CCeEEEEecCCCChh-hhhhchHHHHHHHhcCC----cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPD-SRDAWPPLKQALQHYGP----HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~-C~~~~~~l~~~~~~y~~----~v~~~~~~~ 92 (196)
.+++|+.|.-.-||. |....+.+.++.++|.+ +++|+....
T Consensus 35 gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~ 80 (172)
T 2k6v_A 35 DKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSV 80 (172)
T ss_dssp TSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEES
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEE
Confidence 678999999999996 99999999999998873 688887653
No 177
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=92.97 E-value=0.063 Score=38.88 Aligned_cols=41 Identities=15% Similarity=0.030 Sum_probs=30.8
Q ss_pred CCeEEEEec-CCCChhhhhhchHH---HHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPL---KQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l---~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+ ..-||+|+.+.|.+ .++.+.+.+++.++-.+.
T Consensus 47 gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~ 91 (154)
T 2ju5_A 47 HKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDF 91 (154)
T ss_dssp CCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEEC
T ss_pred CCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecC
Confidence 567888887 89999999999998 666554445666665554
No 178
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=92.93 E-value=0.13 Score=37.21 Aligned_cols=41 Identities=24% Similarity=0.323 Sum_probs=35.0
Q ss_pred CCeEEEEecCCCChh-hhhhchHHHHHHHhcC-----CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPD-SRDAWPPLKQALQHYG-----PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~-C~~~~~~l~~~~~~y~-----~~v~~~~~~~ 92 (196)
++++|+.|.-.-||. |....+.+.++.++|. ++++++....
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~ 72 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITV 72 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEES
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEE
Confidence 678999999999998 9999999999988884 4788877653
No 179
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=92.82 E-value=0.15 Score=42.58 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=32.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhc------CCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHY------GPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y------~~~v~~~~~~ 91 (196)
.+..++.|+-+-|++|+++.|.++++.+++ .++|.|.-.+
T Consensus 22 ~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd 67 (382)
T 2r2j_A 22 ADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVD 67 (382)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEE
Confidence 468999999999999999999999988876 3457776654
No 180
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=92.81 E-value=0.16 Score=38.32 Aligned_cols=31 Identities=6% Similarity=-0.096 Sum_probs=26.6
Q ss_pred CCChhhhhhchHHHHHHHhcC-----CcEEEEEEec
Q 029265 62 PVCPDSRDAWPPLKQALQHYG-----PHVSLVVHLL 92 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~~~~~y~-----~~v~~~~~~~ 92 (196)
.-|+.|+.+.|.++++.++|. ++|.|.-.++
T Consensus 54 ~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~ 89 (178)
T 3ga4_A 54 MSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDV 89 (178)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEET
T ss_pred CCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEEC
Confidence 589999999999999999886 7888886654
No 181
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=92.61 E-value=0.16 Score=43.92 Aligned_cols=40 Identities=18% Similarity=0.383 Sum_probs=34.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~ 91 (196)
.+..++.|+.+-||+|+.+.|.++++.+++.++ |.|.-.+
T Consensus 31 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd 71 (504)
T 2b5e_A 31 HDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQID 71 (504)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEE
Confidence 678899999999999999999999999988774 7776653
No 182
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=92.46 E-value=0.13 Score=37.15 Aligned_cols=40 Identities=13% Similarity=0.141 Sum_probs=33.4
Q ss_pred CCe-EEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAI-IIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~v-tI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++. +|+.|+ ..-||.|....+.+.++.++|.+ .+.++...
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs 70 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVS 70 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 555 888888 99999999999999999998875 48777654
No 183
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=92.41 E-value=0.15 Score=43.80 Aligned_cols=40 Identities=20% Similarity=0.329 Sum_probs=34.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..++.|+-+-|++|+.+.|.++++.+++.+++.|.-.+
T Consensus 21 ~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd 60 (481)
T 3f8u_A 21 AGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVD 60 (481)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEE
T ss_pred CCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEE
Confidence 4789999999999999999999999999888776665543
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=92.40 E-value=0.16 Score=44.39 Aligned_cols=40 Identities=10% Similarity=0.135 Sum_probs=34.6
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
+.++.|+.|.-+.||+|+.+.|.++++..+|+ +|++...+
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd 155 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAID 155 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEE
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEe
Confidence 36789999999999999999999999888876 78887654
No 185
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=92.27 E-value=0.17 Score=42.21 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~~ 92 (196)
.+++|+.|...-||.|....|.+.++.++|.+ ++.|+....
T Consensus 82 GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~ 123 (352)
T 2hyx_A 82 GKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHT 123 (352)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 67899999999999999999999999999875 588877654
No 186
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=92.24 E-value=0.17 Score=37.54 Aligned_cols=41 Identities=7% Similarity=0.060 Sum_probs=34.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|.-.-||.|....+.+.++.++|.++ ++++....
T Consensus 49 Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~ 90 (185)
T 2gs3_A 49 GFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPC 90 (185)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 578899999999999999999999999988754 77776643
No 187
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=92.18 E-value=0.13 Score=37.48 Aligned_cols=40 Identities=8% Similarity=0.193 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|...-||.|. ..+.+.++.++|.++ +.++....
T Consensus 32 Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~ 72 (171)
T 3cmi_A 32 GKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPC 72 (171)
T ss_dssp TCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred CCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEEC
Confidence 57899999999999999 889999999988754 87776654
No 188
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=92.09 E-value=0.13 Score=38.36 Aligned_cols=41 Identities=5% Similarity=0.152 Sum_probs=35.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|.---||.|....|.+.++.++|.++ +.++....
T Consensus 46 Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~ 87 (187)
T 3dwv_A 46 GSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPS 87 (187)
T ss_dssp TSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEB
T ss_pred CCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEEC
Confidence 678999999999999999999999999998764 77776654
No 189
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=92.05 E-value=0.26 Score=35.58 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=31.2
Q ss_pred eEEEEecCCCC--hhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 54 IIIEAFFDPVC--PDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 54 vtI~~f~D~~C--P~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
..|+.|.-.-| +.|+...|.++++.++|.++++|.-.+
T Consensus 35 ~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVd 74 (137)
T 2qsi_A 35 IVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVA 74 (137)
T ss_dssp EEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEEC
T ss_pred cEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEE
Confidence 45555555467 999999999999999999999998765
No 190
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=92.00 E-value=0.18 Score=41.51 Aligned_cols=40 Identities=13% Similarity=0.102 Sum_probs=35.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
.+..++.|++..|+.|.++.+.++++.++|.+++.|...+
T Consensus 135 ~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd 174 (361)
T 3uem_A 135 IKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFID 174 (361)
T ss_dssp CCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEEC
T ss_pred CCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEec
Confidence 4567889999999999999999999999999999888765
No 191
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=91.95 E-value=0.25 Score=38.71 Aligned_cols=41 Identities=15% Similarity=0.230 Sum_probs=33.4
Q ss_pred CCCeEEEEecCCC-ChhhhhhchHHHHHHHhc---CCc--EEEEEEe
Q 029265 51 SDAIIIEAFFDPV-CPDSRDAWPPLKQALQHY---GPH--VSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~-CP~C~~~~~~l~~~~~~y---~~~--v~~~~~~ 91 (196)
+.|+.|..|.+.. |++|+.+.+.++++.+.+ .|+ |+|...+
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd 71 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYY 71 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEE
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEec
Confidence 3789999998874 999999999999998874 333 8888775
No 192
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=91.81 E-value=0.21 Score=36.82 Aligned_cols=37 Identities=16% Similarity=0.239 Sum_probs=31.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++++|+.|+..-||+|....+.+.++.++ ++.++...
T Consensus 58 gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs 94 (176)
T 3kh7_A 58 GKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGIN 94 (176)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEE
T ss_pred CCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEe
Confidence 57889999999999999999999998876 47776654
No 193
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=91.64 E-value=0.22 Score=38.01 Aligned_cols=41 Identities=5% Similarity=0.169 Sum_probs=34.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCc-EEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPH-VSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~-v~~~~~~~ 92 (196)
++++|+.|.---||.|....|.+.++.++|.++ +.++....
T Consensus 47 Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~ 88 (208)
T 2f8a_A 47 GKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPC 88 (208)
T ss_dssp TSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEEC
Confidence 678999999999999999999999999988754 77776543
No 194
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=90.85 E-value=0.034 Score=39.02 Aligned_cols=39 Identities=23% Similarity=0.250 Sum_probs=31.6
Q ss_pred CC-eEEEEecCCCChhhhhhchHHHHHHHhcC---CcEEEEEE
Q 029265 52 DA-IIIEAFFDPVCPDSRDAWPPLKQALQHYG---PHVSLVVH 90 (196)
Q Consensus 52 a~-vtI~~f~D~~CP~C~~~~~~l~~~~~~y~---~~v~~~~~ 90 (196)
++ ++|+.|.-.-||+|....|.+.++.++|. +++.++..
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v 67 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFV 67 (143)
Confidence 45 78999999999999999999999888873 35665544
No 195
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=91.38 E-value=0.032 Score=38.21 Aligned_cols=30 Identities=17% Similarity=0.132 Sum_probs=25.8
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcC
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYG 82 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~ 82 (196)
++.|+.|+-+-||+|+.+.|.++++.++|.
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 456889999999999999999998877664
No 196
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=91.36 E-value=0.11 Score=33.41 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=19.2
Q ss_pred CeEEEEecCCCChhhhhhchHHHH
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~ 76 (196)
..+|++|....||+|++....+.+
T Consensus 3 ~m~v~ly~~~~Cp~C~~~~~~L~~ 26 (89)
T 3msz_A 3 AMKVKIYTRNGCPYCVWAKQWFEE 26 (89)
T ss_dssp CCCEEEEECTTCHHHHHHHHHHHH
T ss_pred ceEEEEEEcCCChhHHHHHHHHHH
Confidence 357899999999999997665543
No 197
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=91.24 E-value=0.23 Score=37.98 Aligned_cols=39 Identities=10% Similarity=0.202 Sum_probs=27.2
Q ss_pred CCeEEEEecCC-CChhhhh---hchHHHHHHHhc--CCcEEEEEE
Q 029265 52 DAIIIEAFFDP-VCPDSRD---AWPPLKQALQHY--GPHVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~D~-~CP~C~~---~~~~l~~~~~~y--~~~v~~~~~ 90 (196)
.++.|+.|.|. .||+|.. +.|.+.++.+++ .++|+|...
T Consensus 21 ~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~v 65 (229)
T 2ywm_A 21 EPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIY 65 (229)
T ss_dssp SCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEE
T ss_pred CCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEe
Confidence 68999999877 5665555 556666665555 678888764
No 198
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=91.24 E-value=0.26 Score=35.24 Aligned_cols=40 Identities=13% Similarity=0.159 Sum_probs=33.3
Q ss_pred CC-eEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DA-IIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~-vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++ .+|+.|+ -.-||.|....+.+.++.++|.+ +++++...
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is 77 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAIS 77 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEE
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEe
Confidence 44 7888887 99999999999999999988874 57777654
No 199
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=91.19 E-value=0.29 Score=41.88 Aligned_cols=42 Identities=12% Similarity=0.275 Sum_probs=35.4
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCC--cEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP--HVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~--~v~~~~~~~ 92 (196)
..+..|+.|+..-|++|+.+.|.+.++.++|.+ ++.+...+.
T Consensus 369 ~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~ 412 (481)
T 3f8u_A 369 ENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDA 412 (481)
T ss_dssp TTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEET
T ss_pred CCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEEC
Confidence 367899999999999999999999999998876 576665553
No 200
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=91.05 E-value=0.16 Score=34.28 Aligned_cols=26 Identities=27% Similarity=0.270 Sum_probs=21.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHH
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQA 77 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~ 77 (196)
.+..|++|.-..||+|+++.+.|++.
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC
Confidence 45678899999999999998887753
No 201
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=90.74 E-value=0.05 Score=40.00 Aligned_cols=39 Identities=8% Similarity=0.120 Sum_probs=28.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~ 90 (196)
.+.+|+.|+-.-||+|+.+.|.+.++.+.+..+++|+..
T Consensus 46 ~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v 84 (164)
T 1sen_A 46 GLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMV 84 (164)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEE
Confidence 567888999999999999999998765444333444443
No 202
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=90.68 E-value=0.21 Score=37.40 Aligned_cols=40 Identities=3% Similarity=-0.015 Sum_probs=34.5
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++++|+.|+ -.-||.|....+.+.++.++|.+ +++|+...
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs 86 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVS 86 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 578899999 99999999999999999888875 58887764
No 203
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=90.42 E-value=0.15 Score=32.32 Aligned_cols=32 Identities=6% Similarity=0.092 Sum_probs=23.4
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
+|+.|....||+|++..+.+++. .++|..++.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi 33 (81)
T 1h75_A 2 RITIYTRNDCVQCHATKRAMENR------GFDFEMINV 33 (81)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEET
T ss_pred EEEEEcCCCChhHHHHHHHHHHC------CCCeEEEEC
Confidence 47889999999999987777642 355555543
No 204
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=90.27 E-value=0.098 Score=35.24 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=28.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecC
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLP 93 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~p 93 (196)
...+|+.|.-..||+|+.+.+.++++. .++.|..++.-
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~----~~i~~~~vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK----DRFILQEVDIT 52 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS----SSSEEEEEETT
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh----hCCeEEEEECC
Confidence 456789999999999999888876543 24777776653
No 205
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=90.16 E-value=0.18 Score=33.89 Aligned_cols=26 Identities=12% Similarity=-0.006 Sum_probs=21.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHH
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQA 77 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~ 77 (196)
.+.+|++|.-..||+|++..+.+++.
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHc
Confidence 34568889999999999998887753
No 206
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=90.11 E-value=0.11 Score=33.92 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=18.9
Q ss_pred EEEEecCCCChhhhhhchHHHHH
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQA 77 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~ 77 (196)
+|++|....||+|++..+.+++.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHH
T ss_pred eEEEEECCCChHHHHHHHHHHHc
Confidence 47889999999999987777653
No 207
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=90.04 E-value=0.049 Score=44.47 Aligned_cols=27 Identities=15% Similarity=0.119 Sum_probs=23.9
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhc
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHY 81 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y 81 (196)
.+++|+-+-||+|+++.|.++++.+++
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 478999999999999999999887765
No 208
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=90.04 E-value=0.33 Score=44.28 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=34.4
Q ss_pred CCCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 51 SDAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
..+..++.|+.+-|++|+.+.|.++++.+++.++|+|.-.+
T Consensus 132 ~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd 172 (780)
T 3apo_A 132 SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVN 172 (780)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEE
T ss_pred CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEe
Confidence 36788999999999999999999999998887766665543
No 209
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=89.99 E-value=0.24 Score=34.34 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=24.4
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~~ 92 (196)
.|++|.-..||+|+++ |+++++++. +++.|..++.
T Consensus 26 ~Vvvf~~~~Cp~C~~a---lk~~L~~~~~~~i~~~~vdi 61 (118)
T 3c1r_A 26 EIFVASKTYCPYCHAA---LNTLFEKLKVPRSKVLVLQL 61 (118)
T ss_dssp SEEEEECSSCHHHHHH---HHHHHTTSCCCGGGEEEEEG
T ss_pred cEEEEEcCCCcCHHHH---HHHHHHHcCCCCCCeEEEEC
Confidence 4777999999999997 455555543 2366666654
No 210
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=89.92 E-value=0.36 Score=44.03 Aligned_cols=41 Identities=12% Similarity=0.049 Sum_probs=35.9
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..|+.|+..-||+|+.+.|.++++.++|.+++.|...+.
T Consensus 675 ~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~ 715 (780)
T 3apo_A 675 KTHWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDC 715 (780)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEEC
Confidence 56789999999999999999999999999988888877653
No 211
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=89.92 E-value=0.2 Score=36.31 Aligned_cols=40 Identities=8% Similarity=0.124 Sum_probs=33.3
Q ss_pred CCeEEEEecCCCCh-hhhhhchHHHHHHHhcCC---cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCP-DSRDAWPPLKQALQHYGP---HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP-~C~~~~~~l~~~~~~y~~---~v~~~~~~ 91 (196)
++++|+.|.-.-|| .|....+.+.++.++|.+ +++|+...
T Consensus 33 gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is 76 (174)
T 1xzo_A 33 GEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFS 76 (174)
T ss_dssp TCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEE
Confidence 57889999999999 999999999998887753 47777664
No 212
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=89.85 E-value=0.18 Score=31.80 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=22.9
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
+|+.|....||+|++..+.+++. .+.|..++.
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i 33 (82)
T 1fov_A 2 NVEIYTKETCPYCHRAKALLSSK------GVSFQELPI 33 (82)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH------TCCCEEEEC
T ss_pred cEEEEECCCChhHHHHHHHHHHC------CCCcEEEEC
Confidence 47789999999999987777642 255555543
No 213
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=89.70 E-value=0.4 Score=42.10 Aligned_cols=41 Identities=17% Similarity=0.167 Sum_probs=36.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC---cEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP---HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~---~v~~~~~~~ 92 (196)
.+..|+.|+-.-|++|+.+.|.++++.++|.+ ++.|...+.
T Consensus 30 ~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~ 73 (519)
T 3t58_A 30 SSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDC 73 (519)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEET
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEEC
Confidence 57899999999999999999999999998876 788887764
No 214
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=89.62 E-value=0.19 Score=31.08 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=23.6
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|+.|....||+|++..+.+++. .+.|..++.
T Consensus 2 ~i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di 33 (75)
T 1r7h_A 2 SITLYTKPACVQCTATKKALDRA------GLAYNTVDI 33 (75)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEET
T ss_pred eEEEEeCCCChHHHHHHHHHHHc------CCCcEEEEC
Confidence 47889999999999988777642 355665553
No 215
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=89.58 E-value=0.15 Score=34.05 Aligned_cols=35 Identities=26% Similarity=0.312 Sum_probs=24.4
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|+.|.-..||+|+++.+.++++-.+|. + +.+++.
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~-~--~~~vdi 47 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG-L--LEFVDI 47 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT-S--EEEEEG
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC-c--cEEEEc
Confidence 4778999999999998888876433332 2 444443
No 216
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=89.56 E-value=0.25 Score=31.95 Aligned_cols=23 Identities=26% Similarity=0.377 Sum_probs=19.4
Q ss_pred eEEEEecCCCChhhhhhchHHHH
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~ 76 (196)
..|+.|.-..||+|++..+.+++
T Consensus 6 ~~v~~y~~~~C~~C~~~~~~L~~ 28 (89)
T 2klx_A 6 KEIILYTRPNCPYCKRARDLLDK 28 (89)
T ss_dssp CCEEEESCSCCTTTHHHHHHHHH
T ss_pred ceEEEEECCCChhHHHHHHHHHH
Confidence 36888999999999998777765
No 217
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=89.53 E-value=0.26 Score=36.48 Aligned_cols=40 Identities=8% Similarity=0.013 Sum_probs=34.1
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++++|+.|. -.-||.|....+.+.++.++|.+ +++++...
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs 72 (187)
T 1we0_A 31 GKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVS 72 (187)
T ss_dssp SSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEE
Confidence 578999999 99999999999999999888864 58877654
No 218
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=89.40 E-value=0.23 Score=36.17 Aligned_cols=40 Identities=10% Similarity=0.097 Sum_probs=26.5
Q ss_pred CCeEEEEecCCCChhhhhhchHH---HHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL---KQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l---~~~~~~y~~~v~~~~~~ 91 (196)
.++.|+.|.-.-||+|+.+++.+ .++.+.+.+++.++..+
T Consensus 47 gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~ 89 (172)
T 3f9u_A 47 NKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLY 89 (172)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEe
Confidence 67889999999999999985444 33333333345555443
No 219
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=89.32 E-value=0.25 Score=37.01 Aligned_cols=40 Identities=5% Similarity=0.032 Sum_probs=33.7
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++++|+.|. -.-||.|....+.+.++.++|.+ +++++...
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is 74 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVS 74 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEE
Confidence 678899999 89999999999999999888864 58777654
No 220
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=88.88 E-value=0.31 Score=31.67 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=23.7
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..|+.|....||+|++..+.+++ . .+.|..++.
T Consensus 6 ~~v~ly~~~~C~~C~~~~~~L~~----~--~i~~~~~di 38 (92)
T 2khp_A 6 VDVIIYTRPGCPYCARAKALLAR----K--GAEFNEIDA 38 (92)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHH----T--TCCCEEEES
T ss_pred ccEEEEECCCChhHHHHHHHHHH----c--CCCcEEEEC
Confidence 36889999999999987776654 2 255565543
No 221
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=88.80 E-value=0.18 Score=34.18 Aligned_cols=24 Identities=17% Similarity=0.122 Sum_probs=19.3
Q ss_pred EEEecCCCChhhhhhchHHHHHHH
Q 029265 56 IEAFFDPVCPDSRDAWPPLKQALQ 79 (196)
Q Consensus 56 I~~f~D~~CP~C~~~~~~l~~~~~ 79 (196)
|++|+...||+|+.+.+.+.++..
T Consensus 22 vv~f~a~~C~~C~~~~~~l~~~~~ 45 (116)
T 2e7p_A 22 VVVFSKTYCGYCNRVKQLLTQVGA 45 (116)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHTC
T ss_pred EEEEECCCChhHHHHHHHHHHcCC
Confidence 444999999999999998877633
No 222
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=88.74 E-value=0.099 Score=34.54 Aligned_cols=26 Identities=19% Similarity=0.142 Sum_probs=22.4
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHh
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQH 80 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~ 80 (196)
+|+.|+-..||.|+.+.+.|+++..+
T Consensus 2 ~vv~f~a~~C~~C~~~~~~L~~~~~~ 27 (87)
T 1ttz_A 2 ALTLYQRDDCHLCDQAVEALAQARAG 27 (87)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHTTCC
T ss_pred EEEEEECCCCchHHHHHHHHHHHHHh
Confidence 58899999999999999999876554
No 223
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=88.67 E-value=0.34 Score=34.78 Aligned_cols=40 Identities=8% Similarity=0.131 Sum_probs=31.7
Q ss_pred CCeEEEEecC-CCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFFD-PVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D-~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++.+|+.|+- --||.|....+.+.++.++|.+ .++++...
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs 76 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVS 76 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 4567777775 7899999999999999988863 47777654
No 224
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=88.29 E-value=0.085 Score=37.87 Aligned_cols=39 Identities=13% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCeEEEEecCCCChhhhhhchHHHH-HHHhcC--CcEEEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQ-ALQHYG--PHVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~-~~~~y~--~~v~~~~~ 90 (196)
++++|+.|.-.-||.|....+.+.+ +.++|. ++++++..
T Consensus 33 gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v 74 (159)
T 2ls5_A 33 GKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGI 74 (159)
Confidence 5778999999999999999999998 777765 35655543
No 225
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=88.35 E-value=0.49 Score=35.37 Aligned_cols=40 Identities=3% Similarity=-0.013 Sum_probs=33.7
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++.+|+.|. ---||.|....+.+.++.++|.+ +++|+...
T Consensus 34 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is 75 (197)
T 1qmv_A 34 GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVS 75 (197)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 577888888 88999999999999999888864 58877664
No 226
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=88.30 E-value=0.56 Score=34.09 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=32.4
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++.+|+.|+ ---||.|....+.+.++.++| .+++++...
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is 86 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVS 86 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEe
Confidence 566777776 678999999999999998888 788888764
No 227
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=88.01 E-value=0.42 Score=38.49 Aligned_cols=38 Identities=24% Similarity=0.256 Sum_probs=29.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~ 90 (196)
.+++|++|....||+|..+...|.++..++ +-+-+.|+
T Consensus 42 ~~~~VelyTs~gCp~C~~Ak~lL~~~~~~~-~vi~l~~~ 79 (270)
T 2axo_A 42 VKGVVELFTSQGCASCPPADEALRKMIQKG-DVVGLSYH 79 (270)
T ss_dssp CCCEEEEEECTTCTTCHHHHHHHHHHHHHT-SSEEEEEE
T ss_pred CCcEEEEEeCCCCCChHHHHHHHHHhhccC-CeeeEEEE
Confidence 348999999999999999999998876664 33434444
No 228
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=87.66 E-value=0.53 Score=36.16 Aligned_cols=40 Identities=3% Similarity=0.125 Sum_probs=33.7
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++++|+.|. .--||.|....+.+.++.++|.+ .+.|+...
T Consensus 69 Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is 110 (222)
T 3ztl_A 69 GKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACS 110 (222)
T ss_dssp TSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 577888888 59999999999999999998864 48888764
No 229
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=87.01 E-value=0.74 Score=31.99 Aligned_cols=39 Identities=13% Similarity=0.222 Sum_probs=32.8
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.+..++-|..-.||-|+.++|.++++.++ ++++|.+.+.
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdV 62 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIV 62 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEG
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEe
Confidence 45688899999999999999999998875 5788887654
No 230
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=87.00 E-value=0.85 Score=35.01 Aligned_cols=41 Identities=7% Similarity=0.131 Sum_probs=35.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
-+..+..|.+..|+.|..+.+.++++.++|.+++.|++.+-
T Consensus 131 ~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~ 171 (227)
T 4f9z_D 131 IQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKILFILVDS 171 (227)
T ss_dssp CCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred CceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCC
Confidence 46677788899999999999999999999999999888663
No 231
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=87.00 E-value=0.6 Score=35.04 Aligned_cols=40 Identities=3% Similarity=0.037 Sum_probs=33.8
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++.+|+.|. ---||.|....+.+.++.++|.+ .++|+...
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is 77 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACS 77 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 578888998 89999999999999999988864 58877654
No 232
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=86.89 E-value=0.32 Score=32.46 Aligned_cols=32 Identities=6% Similarity=0.018 Sum_probs=23.2
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|++|.-..||||.+....|++ . .|.|..++.
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~----~--gi~y~~idi 36 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA----N--RIAYDEVDI 36 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH----T--TCCCEEEET
T ss_pred cEEEEcCCCCHhHHHHHHHHHh----c--CCceEEEEc
Confidence 4788999999999997665553 2 366666653
No 233
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=86.79 E-value=0.37 Score=32.75 Aligned_cols=21 Identities=10% Similarity=0.216 Sum_probs=17.8
Q ss_pred EEEecCCCChhhhhhchHHHH
Q 029265 56 IEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 56 I~~f~D~~CP~C~~~~~~l~~ 76 (196)
|++|.-..||+|++..+.|++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~ 41 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKR 41 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHH
Confidence 778999999999988777764
No 234
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=86.76 E-value=0.84 Score=32.98 Aligned_cols=39 Identities=5% Similarity=-0.051 Sum_probs=32.0
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++.+|+.|+ ---||.|....+.+.++.++| .+++++...
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is 82 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCIS 82 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 566777776 678999999999999999999 778887664
No 235
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=86.74 E-value=0.51 Score=40.70 Aligned_cols=40 Identities=13% Similarity=0.307 Sum_probs=32.4
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC-C--cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG-P--HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~-~--~v~~~~~~ 91 (196)
.+..|+.|+-+-|++|+.+.|.+.++.++|. + ++.+.-.+
T Consensus 376 ~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd 418 (504)
T 2b5e_A 376 KKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLD 418 (504)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEE
T ss_pred CCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEec
Confidence 5678999999999999999999999988775 2 56555544
No 236
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=86.52 E-value=0.38 Score=31.09 Aligned_cols=31 Identities=10% Similarity=0.021 Sum_probs=21.9
Q ss_pred EEEecCC----CChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 56 IEAFFDP----VCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 56 I~~f~D~----~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
|++|.-. .||+|.+....|++ . .+.+.+++.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~----~--gi~y~~idI 36 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV----K--KQPFEFINI 36 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH----T--TCCEEEEES
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH----c--CCCEEEEEe
Confidence 6678878 99999987666553 2 366666665
No 237
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=86.40 E-value=0.39 Score=32.32 Aligned_cols=31 Identities=16% Similarity=0.204 Sum_probs=21.8
Q ss_pred EEEecC-----CCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 56 IEAFFD-----PVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 56 I~~f~D-----~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
|++|+- ..||+|++..+.+.+. .+.|..++.
T Consensus 19 vvvf~~g~~~~~~C~~C~~~~~~L~~~------~i~~~~vdi 54 (105)
T 2yan_A 19 VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDI 54 (105)
T ss_dssp EEEEESBCSSSBCTTHHHHHHHHHHHH------TCCCEEEEG
T ss_pred EEEEEecCCCCCCCccHHHHHHHHHHC------CCCeEEEEC
Confidence 556887 9999999887777653 255555543
No 238
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=86.14 E-value=0.25 Score=33.81 Aligned_cols=23 Identities=26% Similarity=0.408 Sum_probs=19.1
Q ss_pred eEEEEecCCCChhhhhhchHHHH
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~ 76 (196)
..|+.|....||+|+++.+.+++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~ 41 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNK 41 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTT
T ss_pred CCEEEEEeCCChhHHHHHHHHHH
Confidence 36888999999999988777654
No 239
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=86.05 E-value=0.37 Score=33.72 Aligned_cols=27 Identities=15% Similarity=0.142 Sum_probs=20.6
Q ss_pred CCCCeEEEEecCCCChhhhhhchHHHH
Q 029265 50 DSDAIIIEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 50 ~~a~vtI~~f~D~~CP~C~~~~~~l~~ 76 (196)
+++..+|+.|+-.-||+|+.+.+.+.+
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~ 42 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAP 42 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTT
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHh
Confidence 346778999999999999999876543
No 240
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.00 E-value=0.51 Score=32.33 Aligned_cols=39 Identities=8% Similarity=0.031 Sum_probs=27.1
Q ss_pred CCeEEEEecCCCChhhhhhch--HHHHHHHhcCCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWP--PLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~--~l~~~~~~y~~~v~~~~~~~ 92 (196)
....|++|.-..||+|..... ..++++++. .|.|..++.
T Consensus 6 ~~m~V~vy~~~~C~~C~~~~~~~~ak~~L~~~--gi~y~~vdI 46 (111)
T 2ct6_A 6 SGMVIRVFIASSSGFVAIKKKQQDVVRFLEAN--KIEFEEVDI 46 (111)
T ss_dssp CCCCEEEEECSSCSCHHHHHHHHHHHHHHHHT--TCCEEEEET
T ss_pred CccEEEEEEcCCCCCcccchhHHHHHHHHHHc--CCCEEEEEC
Confidence 556799999999999994332 345566654 366776664
No 241
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=85.97 E-value=1 Score=33.77 Aligned_cols=41 Identities=22% Similarity=0.177 Sum_probs=33.1
Q ss_pred CCeEEEEecCCCChh-hhhhchHHHHHHHhc----CCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPD-SRDAWPPLKQALQHY----GPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~-C~~~~~~l~~~~~~y----~~~v~~~~~~~ 92 (196)
++++|+.|.--.||. |....+.+.++.+++ .++++++....
T Consensus 41 Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~ 86 (200)
T 2b7k_A 41 GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITC 86 (200)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEES
T ss_pred CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEEC
Confidence 678999999999997 999999998876654 45788777643
No 242
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=85.90 E-value=0.99 Score=32.47 Aligned_cols=39 Identities=3% Similarity=-0.112 Sum_probs=31.9
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++++|+.|. ---||.|....+.+.++.++| .+++++...
T Consensus 42 gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is 81 (163)
T 1psq_A 42 GKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVS 81 (163)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEE
T ss_pred CCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEE
Confidence 567777776 478999999999999998888 778887664
No 243
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=85.69 E-value=0.72 Score=32.51 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=23.7
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcC-CcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYG-PHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~~ 92 (196)
.|++|.-..||+|.+. ++++++++. ..+.+.+++.
T Consensus 38 ~Vvvy~~~~Cp~C~~a---~k~~L~~~~~~~i~~~~vdv 73 (129)
T 3ctg_A 38 EVFVAAKTYCPYCKAT---LSTLFQELNVPKSKALVLEL 73 (129)
T ss_dssp SEEEEECTTCHHHHHH---HHHHHTTSCCCGGGEEEEEG
T ss_pred CEEEEECCCCCchHHH---HHHHHHhcCccCCCcEEEEc
Confidence 4789999999999987 355555443 2355665554
No 244
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=85.63 E-value=0.65 Score=34.45 Aligned_cols=40 Identities=15% Similarity=0.138 Sum_probs=33.7
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
.+.+|+.|. ---||.|....+.+.++.++|. .+++++...
T Consensus 31 gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is 72 (192)
T 2h01_A 31 KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCS 72 (192)
T ss_dssp TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 578899998 8999999999999999888885 468877654
No 245
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=85.42 E-value=0.41 Score=32.83 Aligned_cols=22 Identities=18% Similarity=0.294 Sum_probs=17.7
Q ss_pred EEEEecCCCChhhhhhchHHHH
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~ 76 (196)
.|++|.-..||+|++..+.|.+
T Consensus 18 ~v~vy~~~~Cp~C~~ak~~L~~ 39 (114)
T 3h8q_A 18 RVVIFSKSYCPHSTRVKELFSS 39 (114)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCcHHHHHHHHHH
Confidence 4667999999999987766654
No 246
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.38 E-value=0.46 Score=33.44 Aligned_cols=22 Identities=14% Similarity=0.138 Sum_probs=18.4
Q ss_pred EEEecCCCChhhhhhchHHHHH
Q 029265 56 IEAFFDPVCPDSRDAWPPLKQA 77 (196)
Q Consensus 56 I~~f~D~~CP~C~~~~~~l~~~ 77 (196)
|++|....||+|+++.+.|+++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~ 50 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDM 50 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHH
T ss_pred EEEEEcCCChHHHHHHHHHHHc
Confidence 5669999999999988877754
No 247
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=85.35 E-value=0.91 Score=33.18 Aligned_cols=38 Identities=8% Similarity=0.131 Sum_probs=30.6
Q ss_pred CCeEEEEecCCC-ChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFFDPV-CPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~-CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++++|+.|.--. ||.|....+.+.++.++ ++++|+...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is 82 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVS 82 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEE
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEE
Confidence 566788887555 99999999999998887 668887764
No 248
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=85.30 E-value=0.99 Score=34.72 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=32.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
+++.|+.|..-.||.|. -.+.|.++.++|.+ .+.++-..
T Consensus 56 GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs 95 (215)
T 2i3y_A 56 GKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFP 95 (215)
T ss_dssp TSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEE
Confidence 68999999999999998 77899999999874 36666443
No 249
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=85.21 E-value=1 Score=39.15 Aligned_cols=40 Identities=10% Similarity=0.007 Sum_probs=33.5
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC---C-----cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG---P-----HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~---~-----~v~~~~~~ 91 (196)
.++.|+.|+-.-||+|+.+.|.+.++.++|. + +|.|.-.+
T Consensus 42 ~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD 89 (470)
T 3qcp_A 42 LCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVN 89 (470)
T ss_dssp GSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEE
Confidence 3678999999999999999999999999886 2 57776654
No 250
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=84.97 E-value=0.44 Score=32.36 Aligned_cols=32 Identities=16% Similarity=0.153 Sum_probs=22.6
Q ss_pred EEEEecC-----CCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFD-----PVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D-----~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|++|.- ..||+|++..+.|++ . .+.|..++.
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~----~--~i~~~~vdi 52 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNS----T--GVEYETFDI 52 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHH----T--CSCEEEEES
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHH----c--CCCeEEEEC
Confidence 3667888 999999988776654 2 355666554
No 251
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=84.74 E-value=0.55 Score=33.92 Aligned_cols=23 Identities=13% Similarity=0.117 Sum_probs=18.8
Q ss_pred EEEEecCCCChhhhhhchHHHHH
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQA 77 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~ 77 (196)
.|++|....||+|+++.+.|+++
T Consensus 50 ~Vvvf~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 50 CVVIFSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHHHc
Confidence 35669999999999988877754
No 252
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=84.52 E-value=1.1 Score=34.34 Aligned_cols=40 Identities=5% Similarity=0.017 Sum_probs=33.6
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
++.+|+.|+ ---||.|....+.+.++.++|. .+++|+...
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is 97 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVS 97 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 578899998 8899999999999999988885 368877654
No 253
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=84.33 E-value=0.98 Score=34.43 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=33.7
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
.+.+|+.|. ---||.|....+.+.++.++|. .+++|+...
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is 93 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCS 93 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 577888888 8899999999999999988886 468887664
No 254
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=83.46 E-value=1.1 Score=34.18 Aligned_cols=39 Identities=5% Similarity=0.021 Sum_probs=31.7
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
+++.|+.|..-.||.| .-.+.|.++.++|.+ .+.++-..
T Consensus 38 GKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs 77 (207)
T 2r37_A 38 GKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFP 77 (207)
T ss_dssp TSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEE
T ss_pred CCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEE
Confidence 6899999999999999 667889999998874 36666543
No 255
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=82.91 E-value=0.25 Score=26.88 Aligned_cols=20 Identities=20% Similarity=0.576 Sum_probs=17.2
Q ss_pred CCChhhhhhchHHHHHHHhc
Q 029265 62 PVCPDSRDAWPPLKQALQHY 81 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~~~~~y 81 (196)
|.||.|.+......+|.+.|
T Consensus 6 FiCP~C~~~l~s~~~L~~Hy 25 (34)
T 3mjh_B 6 FICPQCMKSLGSADELFKHY 25 (34)
T ss_dssp EECTTTCCEESSHHHHHHHH
T ss_pred cCCcHHHHHcCCHHHHHHHH
Confidence 78999999998888887766
No 256
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=82.48 E-value=0.54 Score=32.90 Aligned_cols=66 Identities=11% Similarity=0.166 Sum_probs=39.9
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecCCCCCcChHHHHHHHHHHHhcCCccHHHHHHHHHhcCh
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLPLPYHDNAYATSRALHIVNRTNSSATFCLLEWFFKQQE 130 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~pl~~h~~s~~aa~a~~a~~~~~~~~~~~~~~~lf~~q~ 130 (196)
|-||+.|.-|.|+-|...+..++++-++|. -+|+.+ +.+ +..+. ++..++.++...+.+.++++-+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~ledeY~-ilrVNI--lSf-FsK~g--------~v~~lg~~~~y~lInn~~~~l~ 67 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSEYD-ILHVDI--LSF-FLKDG--------DSSMLGDVKRGTLIGNFAAHLS 67 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTTEE-EEEEEC--CCC-CCCTT--------GGGC-----CCTHHHHHHHHGG
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhcccc-EEEEEe--eee-eccCC--------ceeeeeccchhhhHHHHHHhhc
Confidence 569999999999999999999977766664 333332 222 22221 2344454555677787776544
No 257
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=81.93 E-value=0.68 Score=31.76 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=22.4
Q ss_pred EEEEecC-----CCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFD-----PVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D-----~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|++|.- ..||+|++....|.+ . .+.|..++.
T Consensus 17 ~Vvlf~kg~~~~~~Cp~C~~ak~~L~~----~--gi~y~~~di 53 (111)
T 3zyw_A 17 PCMLFMKGTPQEPRCGFSKQMVEILHK----H--NIQFSSFDI 53 (111)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH----T--TCCCEEEEG
T ss_pred CEEEEEecCCCCCcchhHHHHHHHHHH----c--CCCeEEEEC
Confidence 5778887 999999998766653 2 255555543
No 258
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=80.78 E-value=0.79 Score=31.17 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=20.8
Q ss_pred EEEEecC-----CCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFD-----PVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D-----~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|++|.- +.||+|++.-..|.+ + .+.|..++.
T Consensus 19 ~Vvvy~k~t~~~p~Cp~C~~ak~~L~~----~--gi~~~~~dI 55 (109)
T 3ipz_A 19 KVVLFMKGTRDFPMCGFSNTVVQILKN----L--NVPFEDVNI 55 (109)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH----T--TCCCEEEEG
T ss_pred CEEEEEecCCCCCCChhHHHHHHHHHH----c--CCCcEEEEC
Confidence 4666765 599999997666654 2 355555543
No 259
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=80.54 E-value=0.96 Score=31.93 Aligned_cols=22 Identities=23% Similarity=0.244 Sum_probs=18.7
Q ss_pred EEEEecCCCChhhhhhchHHHH
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~ 76 (196)
.|++|.-..||+|.+.-..|.+
T Consensus 15 ~Vvvysk~~Cp~C~~ak~lL~~ 36 (127)
T 3l4n_A 15 PIIIFSKSTCSYSKGMKELLEN 36 (127)
T ss_dssp SEEEEECTTCHHHHHHHHHHHH
T ss_pred CEEEEEcCCCccHHHHHHHHHH
Confidence 3889999999999998777765
No 260
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=80.34 E-value=1.5 Score=33.67 Aligned_cols=40 Identities=8% Similarity=0.017 Sum_probs=33.4
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
++++|+.|. ---||.|....+.+.++.++|. .+++++...
T Consensus 56 Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is 97 (221)
T 2c0d_A 56 QKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGIS 97 (221)
T ss_dssp TCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred CCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 678888888 8999999999999999888885 468877654
No 261
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=80.05 E-value=2.2 Score=32.11 Aligned_cols=39 Identities=5% Similarity=-0.075 Sum_probs=31.1
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++.+|+.|. ---||.|....+.+.++.++| .++.++...
T Consensus 78 Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is 117 (200)
T 3zrd_A 78 GKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCIS 117 (200)
T ss_dssp TSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEE
T ss_pred CCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEE
Confidence 566677776 557999999999999999999 678777653
No 262
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=78.35 E-value=2.1 Score=31.03 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=33.9
Q ss_pred CCeEEEEecCCCCh-hhhhhchHHHHHHHhcC---CcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCP-DSRDAWPPLKQALQHYG---PHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP-~C~~~~~~l~~~~~~y~---~~v~~~~~~~ 92 (196)
++++|+.|.--.|| .|....+.+.++.++|. .++.++....
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~ 72 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTF 72 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEEC
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEEC
Confidence 67899999999998 59999999999988885 4687776543
No 263
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=78.06 E-value=1.2 Score=30.67 Aligned_cols=31 Identities=16% Similarity=0.095 Sum_probs=23.3
Q ss_pred EEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 56 IEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 56 I~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
|++|.-+.||+|++...-+++ . .|.|.++++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~----~--gi~~~~~di 32 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE----H--KVAYDFHDY 32 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH----T--TCCEEEEEH
T ss_pred EEEEECCCChHHHHHHHHHHH----C--CCceEEEee
Confidence 678999999999987665553 2 377777765
No 264
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=77.59 E-value=2.2 Score=32.31 Aligned_cols=40 Identities=8% Similarity=0.054 Sum_probs=33.0
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
++.+|+.|. ---||.|....+.+.++.++|. ..+.++...
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is 89 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACS 89 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 577888888 8899999999999999888885 368877654
No 265
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=76.55 E-value=3.5 Score=30.14 Aligned_cols=40 Identities=10% Similarity=0.179 Sum_probs=30.4
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++.+|+.|+ ---||.|....+.+.++.++|.+ .+.++...
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs 92 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVS 92 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 455666666 56699999999999999988864 47776653
No 266
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=76.03 E-value=1.4 Score=30.60 Aligned_cols=22 Identities=23% Similarity=0.338 Sum_probs=15.7
Q ss_pred EEEEecC-----CCChhhhhhchHHHH
Q 029265 55 IIEAFFD-----PVCPDSRDAWPPLKQ 76 (196)
Q Consensus 55 tI~~f~D-----~~CP~C~~~~~~l~~ 76 (196)
.|++|.= +.||||.+....|.+
T Consensus 21 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~ 47 (118)
T 2wem_A 21 KVVVFLKGTPEQPQCGFSNAVVQILRL 47 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCCccHHHHHHHHHHHH
Confidence 3666665 689999987666653
No 267
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=75.64 E-value=3.7 Score=33.47 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=30.4
Q ss_pred CCeEEEEecCCCChhhhhhchH-------HHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPP-------LKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~-------l~~~~~~y~~-~v~~~~~~ 91 (196)
.++.++.|+-+-|+ |+.+.|. ++++.+++.+ +|+|.-.+
T Consensus 28 ~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd 74 (350)
T 1sji_A 28 YDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVD 74 (350)
T ss_dssp CSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEE
T ss_pred CCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEe
Confidence 57899999999999 9888888 7777777655 47666543
No 268
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=75.48 E-value=4.2 Score=28.76 Aligned_cols=37 Identities=8% Similarity=0.125 Sum_probs=27.6
Q ss_pred eEEEEec-CCCChhhhhhchHHHHHHHhcCCcEEEEEE
Q 029265 54 IIIEAFF-DPVCPDSRDAWPPLKQALQHYGPHVSLVVH 90 (196)
Q Consensus 54 vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~ 90 (196)
+.|+.|+ ---||.|....+.+.++.++|.++-.++..
T Consensus 37 ~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~i 74 (159)
T 2a4v_A 37 VVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGL 74 (159)
T ss_dssp EEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred eEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 5666654 678999999999999999888743355443
No 269
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=75.37 E-value=1.6 Score=30.25 Aligned_cols=31 Identities=26% Similarity=0.450 Sum_probs=23.5
Q ss_pred EEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 56 IEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 56 I~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
|.+|.-+.||+|++...-|+ +. .+.|.++++
T Consensus 2 i~iY~~~~C~~c~ka~~~L~----~~--gi~~~~~di 32 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLN----RH--DVVFQEHNI 32 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHH----HT--TCCEEEEET
T ss_pred EEEEeCCCCHHHHHHHHHHH----Hc--CCCeEEEec
Confidence 67899999999999766554 32 377777765
No 270
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=75.31 E-value=3.7 Score=30.26 Aligned_cols=40 Identities=8% Similarity=-0.051 Sum_probs=30.8
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
++.+|+.|+ ---||.|....+.+.++.++|. ..++++...
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is 71 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVS 71 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 466777776 3679999999999999888876 368777654
No 271
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=74.82 E-value=1.7 Score=30.20 Aligned_cols=22 Identities=27% Similarity=0.348 Sum_probs=15.7
Q ss_pred EEEEecC-----CCChhhhhhchHHHH
Q 029265 55 IIEAFFD-----PVCPDSRDAWPPLKQ 76 (196)
Q Consensus 55 tI~~f~D-----~~CP~C~~~~~~l~~ 76 (196)
.|++|.- +.||||++.-..|.+
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~ 43 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGN 43 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHH
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHH
Confidence 3556655 589999998766654
No 272
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=74.60 E-value=1.6 Score=30.48 Aligned_cols=21 Identities=24% Similarity=0.379 Sum_probs=14.6
Q ss_pred EEEEecC-----CCChhhhhhchHHH
Q 029265 55 IIEAFFD-----PVCPDSRDAWPPLK 75 (196)
Q Consensus 55 tI~~f~D-----~~CP~C~~~~~~l~ 75 (196)
.|++|.- +.||||++.-..|.
T Consensus 21 ~VvvF~Kgt~~~P~C~fc~~ak~lL~ 46 (118)
T 2wul_A 21 KVVVFLKGTPEQPQCGFSNAVVQILR 46 (118)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH
T ss_pred CEEEEEcCCCCCCCCHHHHHHHHHHH
Confidence 3666743 68999988766554
No 273
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=74.40 E-value=1.3 Score=31.63 Aligned_cols=32 Identities=19% Similarity=0.164 Sum_probs=20.9
Q ss_pred EEEEecC-----CCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFD-----PVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D-----~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|++|.- +.||+|.+....|. ++ .|.|..++.
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~----~~--gv~y~~vdI 72 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALA----AC--GERFAYVDI 72 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHH----TT--CSCCEEEEG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHH----Hc--CCceEEEEC
Confidence 3666776 89999998665554 33 355565554
No 274
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=73.63 E-value=3.3 Score=30.07 Aligned_cols=42 Identities=10% Similarity=0.095 Sum_probs=30.5
Q ss_pred CCCeEEEEecCCCCh-hhhhhchHHHHHHHhc---CCcEEEEEEec
Q 029265 51 SDAIIIEAFFDPVCP-DSRDAWPPLKQALQHY---GPHVSLVVHLL 92 (196)
Q Consensus 51 ~a~vtI~~f~D~~CP-~C~~~~~~l~~~~~~y---~~~v~~~~~~~ 92 (196)
.++++|+.|.-..|| .|...-+.+.++.+.+ ..+|.+++.-+
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isv 76 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSV 76 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEES
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeec
Confidence 367889999988898 5988777777665544 45687776643
No 275
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=72.29 E-value=2.2 Score=30.04 Aligned_cols=32 Identities=19% Similarity=0.421 Sum_probs=23.7
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|.+|.-+.||+|++....+++ . .+.|.++++
T Consensus 2 mi~lY~~~~C~~C~ka~~~L~~----~--gi~y~~~di 33 (132)
T 1z3e_A 2 MVTLYTSPSCTSCRKARAWLEE----H--EIPFVERNI 33 (132)
T ss_dssp CEEEEECTTCHHHHHHHHHHHH----T--TCCEEEEET
T ss_pred eEEEEeCCCChHHHHHHHHHHH----c--CCceEEEEc
Confidence 3778999999999987666553 2 367777765
No 276
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=71.20 E-value=2.4 Score=29.31 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=24.5
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
..|.+|.-+.||+|++...-+++ . .|.|.++++
T Consensus 5 M~i~iY~~~~C~~C~ka~~~L~~----~--gi~y~~~di 37 (120)
T 2kok_A 5 MSVTIYGIKNCDTMKKARIWLED----H--GIDYTFHDY 37 (120)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHH----H--TCCEEEEEH
T ss_pred cEEEEEECCCChHHHHHHHHHHH----c--CCcEEEEee
Confidence 35889999999999987666653 2 366777765
No 277
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=70.49 E-value=5.5 Score=22.75 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=11.1
Q ss_pred CCCCCCchhHHHHHHHHHHH
Q 029265 2 QSPSPNKNHATLILQSALLC 21 (196)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~ 21 (196)
|++|+.-...+.+|++++++
T Consensus 6 ~~~~~~~~Ia~~vVGvll~v 25 (44)
T 2jwa_A 6 QRASPLTSIISAVVGILLVV 25 (44)
T ss_dssp CCCCSHHHHHHHHHHHHHHH
T ss_pred CCCCcccchHHHHHHHHHHH
Confidence 55555555566666644333
No 278
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=69.50 E-value=2.7 Score=32.26 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=24.2
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
...|+.|.-..||+|++....|++ . .+.+..++.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~----~--~i~~~~~~i 202 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHD----K--GLSFEEIIL 202 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHH----H--TCCCEEEET
T ss_pred cceEEEEECCCChHHHHHHHHHHH----c--CCceEEEEC
Confidence 456889999999999988766654 2 255555554
No 279
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=68.56 E-value=2.3 Score=27.63 Aligned_cols=36 Identities=6% Similarity=0.011 Sum_probs=22.7
Q ss_pred EEEEecCCCChhhhhhc--hHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAW--PPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~--~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|++|.-..||+|.-.. ...++++++. .|.|..++.
T Consensus 3 ~v~ly~~~~C~~c~~~~~~~~ak~~L~~~--~i~~~~~di 40 (93)
T 1t1v_A 3 GLRVYSTSVTGSREIKSQQSEVTRILDGK--RIQYQLVDI 40 (93)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHHT--TCCCEEEET
T ss_pred CEEEEEcCCCCCchhhHHHHHHHHHHHHC--CCceEEEEC
Confidence 47889999999994322 1234455553 366666654
No 280
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=68.33 E-value=3 Score=28.96 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=24.0
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
-|.+|.-+.||+|++...-|++ . .+.|.++++
T Consensus 4 Mi~iY~~~~C~~c~ka~~~L~~----~--gi~~~~~di 35 (120)
T 3fz4_A 4 MLTFYEYPKCSTCRRAKAELDD----L--AWDYDAIDI 35 (120)
T ss_dssp SEEEEECSSCHHHHHHHHHHHH----H--TCCEEEEET
T ss_pred eEEEEeCCCChHHHHHHHHHHH----c--CCceEEEEe
Confidence 4778999999999998766653 2 367777765
No 281
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=66.66 E-value=4.1 Score=29.40 Aligned_cols=25 Identities=12% Similarity=0.024 Sum_probs=21.3
Q ss_pred CCeEEEEecCCCChhhhhhchHHHH
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQ 76 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~ 76 (196)
.+..++.|+-.-||+|+.+.|.+.+
T Consensus 44 ~KpVlV~F~A~WC~~Ck~m~p~~~~ 68 (151)
T 3ph9_A 44 KKPLMVIHHLEDCQYSQALKKVFAQ 68 (151)
T ss_dssp TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHhHHHHHHHHhc
Confidence 4667888888899999999998875
No 282
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=66.11 E-value=6.4 Score=28.08 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=29.6
Q ss_pred CCeEEEEec-CCCChhhh-hhchHHHHHHHhcC-CcEE-EEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSR-DAWPPLKQALQHYG-PHVS-LVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~-~~~~~l~~~~~~y~-~~v~-~~~~~ 91 (196)
++..|+.|+ ---||.|. .-.+.+.++.++|. ..++ ++...
T Consensus 35 gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is 78 (162)
T 1tp9_A 35 GKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCIS 78 (162)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence 456666666 67899999 88899988888775 4577 66543
No 283
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=65.76 E-value=2.9 Score=29.05 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=24.0
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|.+|.-+.||+|++...-|+ +. .+.|.++++
T Consensus 5 ~i~iY~~p~C~~c~ka~~~L~----~~--gi~~~~~di 36 (120)
T 3gkx_A 5 KTLFLQYPACSTCQKAKKWLI----EN--NIEYTNRLI 36 (120)
T ss_dssp CCEEEECTTCHHHHHHHHHHH----HT--TCCCEEEET
T ss_pred EEEEEECCCChHHHHHHHHHH----Hc--CCceEEEec
Confidence 478899999999999766554 32 367777765
No 284
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=64.32 E-value=2.9 Score=29.96 Aligned_cols=32 Identities=16% Similarity=0.272 Sum_probs=23.3
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|.+|.-+.||+|++.-.-|+ +. .+.|.++++
T Consensus 3 ~itiY~~p~C~~crkak~~L~----~~--gi~~~~idi 34 (141)
T 1s3c_A 3 NITIYHNPASGTSRNTLEMIR----NS--GTEPTIILY 34 (141)
T ss_dssp CCEEECCTTCHHHHHHHHHHH----HT--TCCCEEECT
T ss_pred cEEEEECCCChHHHHHHHHHH----Hc--CCCEEEEEC
Confidence 366899999999998765554 32 477777765
No 285
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=63.82 E-value=3.3 Score=28.66 Aligned_cols=32 Identities=19% Similarity=0.360 Sum_probs=23.9
Q ss_pred EEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 55 IIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
.|.+|.-+.||+|++...-++ +. .+.|.++++
T Consensus 5 ~i~iY~~p~C~~c~ka~~~L~----~~--gi~~~~~di 36 (119)
T 3f0i_A 5 SVVIYHNPKCSKSRETLALLE----NQ--GIAPQVIKY 36 (119)
T ss_dssp CCEEECCTTCHHHHHHHHHHH----HT--TCCCEEECH
T ss_pred EEEEEECCCChHHHHHHHHHH----Hc--CCceEEEEe
Confidence 688999999999999766655 32 366677654
No 286
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=63.47 E-value=5.9 Score=28.30 Aligned_cols=38 Identities=0% Similarity=-0.183 Sum_probs=27.8
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCCcEEEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGPHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~ 91 (196)
++.+|+.|. ---||.|....+.+.++.++ .++.++...
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is 84 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTIS 84 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEE
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEE
Confidence 455666665 66799999999999888766 557766553
No 287
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=62.62 E-value=2.9 Score=29.09 Aligned_cols=31 Identities=19% Similarity=0.471 Sum_probs=23.1
Q ss_pred EEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEec
Q 029265 56 IEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLL 92 (196)
Q Consensus 56 I~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~ 92 (196)
|.+|.-+.||+|++.-.-|+ + ..+.|.++++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~----~--~gi~~~~~di 37 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVE----Q--QGITPQVVLY 37 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHH----T--TTCCCEEECT
T ss_pred EEEEECCCCHHHHHHHHHHH----H--cCCCcEEEee
Confidence 77899999999999765554 3 2466777765
No 288
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=62.29 E-value=4.2 Score=30.14 Aligned_cols=22 Identities=5% Similarity=-0.118 Sum_probs=18.5
Q ss_pred CCeEEEEecCCCChhhhhhchH
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPP 73 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~ 73 (196)
.+..++.|.-.-|++|+.+.+.
T Consensus 39 ~KpVlvdF~A~WC~~Ck~m~~~ 60 (173)
T 3ira_A 39 NKPVFLSIGYSTCHWCHMMAHE 60 (173)
T ss_dssp TCCEEEEEECTTCHHHHHHHHH
T ss_pred CCCEEEecccchhHhhcccccc
Confidence 4667888888999999999884
No 289
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=60.05 E-value=7.5 Score=28.13 Aligned_cols=40 Identities=10% Similarity=-0.005 Sum_probs=28.7
Q ss_pred CCeEEEEec-CCCChhhhh-hchHHHHHHHhcC-CcE-EEEEEe
Q 029265 52 DAIIIEAFF-DPVCPDSRD-AWPPLKQALQHYG-PHV-SLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~-~~~~l~~~~~~y~-~~v-~~~~~~ 91 (196)
++.+|+.|+ ---||.|.. -.|.+.++.++|. ..+ .++-..
T Consensus 31 Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is 74 (167)
T 2wfc_A 31 GKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMA 74 (167)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEE
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 455666665 567999999 8888888887775 357 666553
No 290
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=58.71 E-value=12 Score=28.91 Aligned_cols=40 Identities=5% Similarity=0.093 Sum_probs=31.1
Q ss_pred CCeEEEEecC-CCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 52 DAIIIEAFFD-PVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D-~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
++.+|+.|+- --||.|..-.+.+.++.++|.+ .+.++...
T Consensus 77 Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is 118 (240)
T 3qpm_A 77 GKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACS 118 (240)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred CCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 4666666665 7899999999999999988863 57777653
No 291
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=54.18 E-value=9.7 Score=26.57 Aligned_cols=37 Identities=5% Similarity=0.057 Sum_probs=26.4
Q ss_pred EEEEecCCCChhhhhhch--HHHHHHHhcCCcEEEEEEecC
Q 029265 55 IIEAFFDPVCPDSRDAWP--PLKQALQHYGPHVSLVVHLLP 93 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~--~l~~~~~~y~~~v~~~~~~~p 93 (196)
.|++|+-..||+|.-... ..+.+++. ..|.|.-++..
T Consensus 1 ~V~vYtt~~c~~c~~kk~c~~aK~lL~~--kgV~feEidI~ 39 (121)
T 1u6t_A 1 VIRVYIASSSGSTAIKKKQQDVLGFLEA--NKIGFEEKDIA 39 (121)
T ss_dssp CEEEEECTTCSCHHHHHHHHHHHHHHHH--TTCCEEEEECT
T ss_pred CEEEEecCCCCCccchHHHHHHHHHHHH--CCCceEEEECC
Confidence 378999999999975553 35567775 35777776643
No 292
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=49.97 E-value=19 Score=29.45 Aligned_cols=40 Identities=25% Similarity=0.198 Sum_probs=34.7
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCC--cEEEEEEec
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGP--HVSLVVHLL 92 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~--~v~~~~~~~ 92 (196)
+..++.|.+..|+.|..+.+.++++.++|.+ ++.|++.+-
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~ 289 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDP 289 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECG
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECC
Confidence 4567889999999999999999999999987 799998764
No 293
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=49.65 E-value=27 Score=19.76 Aligned_cols=25 Identities=12% Similarity=0.115 Sum_probs=15.4
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHH
Q 029265 2 QSPSPNKNHATLILQSALLCFFVFN 26 (196)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~ 26 (196)
|++..+-+...+|.+++++++++++
T Consensus 6 ~~s~~~~IA~gVVgGv~~~~ii~~~ 30 (44)
T 2ks1_B 6 NGPKIPSIATGMVGALLLLLVVALG 30 (44)
T ss_dssp CCSCSSSSTHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEEeehhHHHHHHHHHHHH
Confidence 4455666777777777776554433
No 294
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=49.02 E-value=8.6 Score=27.76 Aligned_cols=23 Identities=0% Similarity=-0.198 Sum_probs=18.0
Q ss_pred CCeEEEEecCCCChhhhhhchHH
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPL 74 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l 74 (196)
.+..++.|...-|++|+.+++.+
T Consensus 42 ~K~vlvd~~a~wC~~C~~me~~v 64 (153)
T 2dlx_A 42 NKWLMINIQNVQDFACQCLNRDV 64 (153)
T ss_dssp TCEEEEEEECSCTTTHHHHHHHT
T ss_pred CCeEEEEEECCCCHhHHHHHHHh
Confidence 45677777778999999997543
No 295
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=48.35 E-value=17 Score=27.58 Aligned_cols=39 Identities=13% Similarity=0.205 Sum_probs=28.8
Q ss_pred CCeEEEEec-CCCChhhh-hhchHHHHHHHhcC-CcE-EEEEE
Q 029265 52 DAIIIEAFF-DPVCPDSR-DAWPPLKQALQHYG-PHV-SLVVH 90 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~-~~~~~l~~~~~~y~-~~v-~~~~~ 90 (196)
++.+|+.|+ ---||.|. .-.+.+.++.++|. ..+ .++-.
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~i 75 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVV 75 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 456666666 66799999 88899988888775 356 66654
No 296
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=47.23 E-value=17 Score=29.37 Aligned_cols=39 Identities=28% Similarity=0.223 Sum_probs=33.3
Q ss_pred CeEEEEecCCCChhhhhhchHHHHHHHhcCC--cEEEEEEe
Q 029265 53 AIIIEAFFDPVCPDSRDAWPPLKQALQHYGP--HVSLVVHL 91 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~--~v~~~~~~ 91 (196)
++.+..|.+..|+.|..+.+.++++.++|.+ ++.|.+.+
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id 286 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWID 286 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEEC
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEEC
Confidence 5667789999999999999999999999875 88888765
No 297
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=46.36 E-value=4.1 Score=29.09 Aligned_cols=39 Identities=5% Similarity=0.234 Sum_probs=22.6
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEE
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~ 90 (196)
++..|+.|+ ---||.|..-.+.+.++.++|.+ .+.++..
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~v 70 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGI 70 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEE
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeee
Confidence 566677776 56799999988888888777753 4655543
No 298
>4gd5_A Phosphate ABC transporter, phosphate-binding PROT; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE; 1.70A {Clostridium perfringens}
Probab=46.08 E-value=12 Score=29.21 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=0.0
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHh
Q 029265 3 SPSPNKNHATLILQSALLCFFVFNSC 28 (196)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 (196)
|.+|-|+++.++++++++.++++++|
T Consensus 1 ~~~M~kk~~~~~~~~~~l~~~~l~gc 26 (279)
T 4gd5_A 1 SNAMFKKRLIAIIGTIFIGATAMVGC 26 (279)
T ss_dssp --------------------------
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHc
Confidence 35678888877777766665554443
No 299
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=44.83 E-value=18 Score=28.25 Aligned_cols=39 Identities=8% Similarity=0.099 Sum_probs=30.0
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEE
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~ 90 (196)
++.+|+.|+ ---||.|..-.+.+.++.++|.+ .+.++..
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~I 131 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVAC 131 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 566676666 55699999999999999888863 5777765
No 300
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=44.24 E-value=34 Score=27.91 Aligned_cols=39 Identities=15% Similarity=0.073 Sum_probs=26.5
Q ss_pred CCeEEEEecCCCChhhhhh---c---hHHHHHHHhcCC-cEEEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDA---W---PPLKQALQHYGP-HVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~---~---~~l~~~~~~y~~-~v~~~~~ 90 (196)
.++.++.|+-+-|++|+.. . |.++++.+.+.+ +|.|.-.
T Consensus 30 ~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~V 75 (367)
T 3us3_A 30 YEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLV 75 (367)
T ss_dssp CSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred CCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEE
Confidence 5788999999999997332 2 466666666654 4666544
No 301
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=44.08 E-value=23 Score=20.06 Aligned_cols=23 Identities=17% Similarity=-0.026 Sum_probs=11.2
Q ss_pred CCCCCCchhHHHHHHHHHHHHHH
Q 029265 2 QSPSPNKNHATLILQSALLCFFV 24 (196)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ 24 (196)
|+|...-+...+|.+++++++++
T Consensus 5 ~~s~~~aIA~gVVgGv~~v~ii~ 27 (44)
T 2l2t_A 5 QHARTPLIAAGVIGGLFILVIVG 27 (44)
T ss_dssp SSCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEeehHHHHHHHHHH
Confidence 44444444455555555544433
No 302
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=42.07 E-value=13 Score=26.86 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=27.8
Q ss_pred CeEEEEecCCCChhhhhh-chHHHHHHHhcC-CcEE-EEEE
Q 029265 53 AIIIEAFFDPVCPDSRDA-WPPLKQALQHYG-PHVS-LVVH 90 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~~-~~~l~~~~~~y~-~~v~-~~~~ 90 (196)
++.|..|.---||.|..- .+.+.++.++|. ..+. ++-.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~I 85 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICV 85 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEE
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
Confidence 466667777789999997 788888877775 3466 5543
No 303
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=38.89 E-value=19 Score=26.58 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=26.7
Q ss_pred CeEEEEecCCCChhhhh-hchHHHHHHHhcCC-cEE-EEEE
Q 029265 53 AIIIEAFFDPVCPDSRD-AWPPLKQALQHYGP-HVS-LVVH 90 (196)
Q Consensus 53 ~vtI~~f~D~~CP~C~~-~~~~l~~~~~~y~~-~v~-~~~~ 90 (196)
++.|..|.---||.|.. --+.+.++.++|.+ .+. ++-.
T Consensus 58 ~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~I 98 (184)
T 3uma_A 58 RVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVV 98 (184)
T ss_dssp EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEE
T ss_pred CEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 34455555778999999 58999988888753 466 5543
No 304
>1xg8_A Hypothetical protein SA0798; structural genomics, protein structure initative, MCSG, PSI, protein structure initiative; 2.10A {Staphylococcus aureus subsp} SCOP: c.47.1.17
Probab=38.85 E-value=82 Score=21.38 Aligned_cols=41 Identities=12% Similarity=0.129 Sum_probs=28.6
Q ss_pred CCeEEEEec-CCCChhhhhhch------HHHHH-HHhcCC-cEEEEEEec
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWP------PLKQA-LQHYGP-HVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~------~l~~~-~~~y~~-~v~~~~~~~ 92 (196)
.++.|.+|. |-.|+.|-.+=. =|+.. -++|++ .++|.|.++
T Consensus 6 ~~v~i~VYGAe~iCASCVnaPSSkeTyEWLqAal~RKyp~~~f~~~YIDI 55 (111)
T 1xg8_A 6 QSNAVVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDI 55 (111)
T ss_dssp SCEEEEEEECSSCCGGGSSSCCHHHHHHHHHHHHHHHCTTSCEEEEEEET
T ss_pred eEEEEEEEcccccchhccCCCCchhHHHHHHHHHhCcCCCCceEEEEEec
Confidence 468888886 899999988632 23322 246874 688888875
No 305
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=37.66 E-value=7.2 Score=19.98 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=16.8
Q ss_pred CCCChhhhhhchHHHHHHHhc
Q 029265 61 DPVCPDSRDAWPPLKQALQHY 81 (196)
Q Consensus 61 D~~CP~C~~~~~~l~~~~~~y 81 (196)
.+.||-|+.--|..+.+...|
T Consensus 3 k~~CpvCk~q~Pd~kt~~~H~ 23 (28)
T 2jvx_A 3 DFCCPKCQYQAPDMDTLQIHV 23 (28)
T ss_dssp CEECTTSSCEESSHHHHHHHH
T ss_pred cccCccccccCcChHHHHHHH
Confidence 467999999999888766555
No 306
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=36.79 E-value=45 Score=25.17 Aligned_cols=38 Identities=11% Similarity=0.057 Sum_probs=28.7
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
+.|..|.---||.|....+.+.++.++|.+ +++++...
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS 72 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALS 72 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 555555566799999999999999888863 58777653
No 307
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=36.47 E-value=5 Score=28.93 Aligned_cols=39 Identities=8% Similarity=0.188 Sum_probs=27.9
Q ss_pred CCeEEEEec-CCCChhhhhhchHHHHHHHhcCC-cEEEEEE
Q 029265 52 DAIIIEAFF-DPVCPDSRDAWPPLKQALQHYGP-HVSLVVH 90 (196)
Q Consensus 52 a~vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~ 90 (196)
++..|..|+ ---||.|..--+.+.++.++|.+ .+.++..
T Consensus 33 Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~i 73 (164)
T 4gqc_A 33 GRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAI 73 (164)
T ss_dssp SSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEE
T ss_pred CCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEe
Confidence 455666665 56799999988888877777753 4666654
No 308
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=35.23 E-value=10 Score=20.09 Aligned_cols=19 Identities=16% Similarity=0.447 Sum_probs=15.4
Q ss_pred CCChhhhhhchHHHHHHHh
Q 029265 62 PVCPDSRDAWPPLKQALQH 80 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~~~~~ 80 (196)
-.|-||++-+..++.+++.
T Consensus 10 qhcrfckkkysdvknlikh 28 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKH 28 (37)
T ss_dssp CEETTTTEECSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4699999999888877764
No 309
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=33.86 E-value=17 Score=30.26 Aligned_cols=19 Identities=26% Similarity=0.155 Sum_probs=15.8
Q ss_pred eEEEEecCCCChhhhhhch
Q 029265 54 IIIEAFFDPVCPDSRDAWP 72 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~ 72 (196)
..|++|.-..||+|.+...
T Consensus 261 ~~VvVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 261 NEIFVASKTYCPYSHAALN 279 (362)
T ss_dssp CSEEEEECTTCHHHHHHHH
T ss_pred CCEEEEEcCCCcchHHHHH
Confidence 3588899999999998754
No 310
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=32.03 E-value=66 Score=24.78 Aligned_cols=38 Identities=8% Similarity=0.049 Sum_probs=27.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcC--CcEEEEEEe
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYG--PHVSLVVHL 91 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~--~~v~~~~~~ 91 (196)
.+..|+.|+- .||||. +.|.++++.++|. ++|.|.-.+
T Consensus 22 ~~~vlV~FyA-~~pWCg-l~P~~e~lA~~~~~~~~v~~akVD 61 (240)
T 2qc7_A 22 SKFVLVKFDT-QYPYGE-KQDEFKRLAENSASSDDLLVAEVG 61 (240)
T ss_dssp CSEEEEEECC-SSCCSH-HHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred CCCEEEEEeC-CCCCCc-chHHHHHHHHHhcCCCCeEEEEEe
Confidence 3566777765 366666 9999999988885 467776555
No 311
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=30.29 E-value=55 Score=24.99 Aligned_cols=38 Identities=13% Similarity=-0.023 Sum_probs=27.6
Q ss_pred eEEEEec-CCCChhhhhhchHHHHHHHhcC-CcEEEEEEe
Q 029265 54 IIIEAFF-DPVCPDSRDAWPPLKQALQHYG-PHVSLVVHL 91 (196)
Q Consensus 54 vtI~~f~-D~~CP~C~~~~~~l~~~~~~y~-~~v~~~~~~ 91 (196)
..|..|. ---||.|....+.+.++.++|. .+++++..-
T Consensus 31 ~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS 70 (233)
T 2v2g_A 31 WGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALS 70 (233)
T ss_dssp EEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred eEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 4555554 4579999999999988888775 357777653
No 312
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=29.46 E-value=1e+02 Score=23.89 Aligned_cols=39 Identities=5% Similarity=-0.078 Sum_probs=26.6
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhc---CCcEEEEEEec
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHY---GPHVSLVVHLL 92 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y---~~~v~~~~~~~ 92 (196)
.+..|+.|+- ..|||. +.|.++++.++| .++|.|.-.+.
T Consensus 33 ~~~vlV~Fy~-~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~ 74 (248)
T 2c0g_A 33 FPYSVVKFDI-ASPYGE-KHEAFTAFSKSAHKATKDLLIATVGV 74 (248)
T ss_dssp SSEEEEEEEE-SSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEE
T ss_pred CCCEEEEEEC-CCCCCc-cHHHHHHHHHHHhccCCCeEEEEEEC
Confidence 4566777761 255555 999999998887 45777766553
No 313
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=29.40 E-value=24 Score=30.80 Aligned_cols=21 Identities=19% Similarity=0.327 Sum_probs=17.5
Q ss_pred EEEEecCCCChhhhhhchHHH
Q 029265 55 IIEAFFDPVCPDSRDAWPPLK 75 (196)
Q Consensus 55 tI~~f~D~~CP~C~~~~~~l~ 75 (196)
+|++|.-..||+|.+....|.
T Consensus 19 ~v~vy~~~~Cp~C~~~k~~L~ 39 (598)
T 2x8g_A 19 AVILFSKTTCPYCKKVKDVLA 39 (598)
T ss_dssp SEEEEECTTCHHHHHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHH
Confidence 588899999999998766554
No 314
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=28.83 E-value=9 Score=24.90 Aligned_cols=26 Identities=12% Similarity=0.268 Sum_probs=16.1
Q ss_pred CCCChhhhhhc----------hHHHHHHHhcCCcEE
Q 029265 61 DPVCPDSRDAW----------PPLKQALQHYGPHVS 86 (196)
Q Consensus 61 D~~CP~C~~~~----------~~l~~~~~~y~~~v~ 86 (196)
-+.||+|..-+ ..+.+++.++.|.|+
T Consensus 51 ~FkCP~CgEEFyG~~Lp~~EaeKVFELLNdFkGsID 86 (95)
T 2k5c_A 51 VFKCPVCGEEFYGKTLPRREAEKVFELLNDFKGGID 86 (95)
T ss_dssp EEECTTTCCEEETTSSCTTTHHHHHHHHHSCSSSCB
T ss_pred hhcCCCccHHHhcccCChHHHHHHHHHHHHccCccc
Confidence 36899998642 124457777765443
No 315
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=28.13 E-value=53 Score=20.31 Aligned_cols=20 Identities=0% Similarity=-0.185 Sum_probs=13.2
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 029265 8 KNHATLILQSALLCFFVFNS 27 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (196)
|+...++.++++++.|+++.
T Consensus 18 RigGLifA~vLfi~GI~iil 37 (67)
T 2jp3_A 18 QLGGLIFGGLLCIAGIALAL 37 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred eecchhhHHHHHHHHHHHHH
Confidence 45566777777777666555
No 316
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=27.16 E-value=16 Score=23.88 Aligned_cols=12 Identities=17% Similarity=0.191 Sum_probs=9.4
Q ss_pred cCCCChhhhhhc
Q 029265 60 FDPVCPDSRDAW 71 (196)
Q Consensus 60 ~D~~CP~C~~~~ 71 (196)
.-|.||+|.+-.
T Consensus 22 t~F~CPfCnh~~ 33 (85)
T 1wii_A 22 TQFTCPFCNHEK 33 (85)
T ss_dssp SCCCCTTTCCSS
T ss_pred CeEcCCCCCCCC
Confidence 358899998864
No 317
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=26.66 E-value=37 Score=24.60 Aligned_cols=36 Identities=11% Similarity=0.142 Sum_probs=24.9
Q ss_pred eEEEEecCCCChhhhh-hchHHHHHHHhcCC-cEEEEE
Q 029265 54 IIIEAFFDPVCPDSRD-AWPPLKQALQHYGP-HVSLVV 89 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~-~~~~l~~~~~~y~~-~v~~~~ 89 (196)
+.|.-|----||.|.. --+.+.++.++|.+ .+.++.
T Consensus 46 vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~ 83 (173)
T 3mng_A 46 GVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVA 83 (173)
T ss_dssp EEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEE
T ss_pred EEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 4444444677999995 66888888887753 466663
No 318
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=26.11 E-value=10 Score=23.59 Aligned_cols=13 Identities=31% Similarity=0.669 Sum_probs=10.9
Q ss_pred ecCCCChhhhhhc
Q 029265 59 FFDPVCPDSRDAW 71 (196)
Q Consensus 59 f~D~~CP~C~~~~ 71 (196)
|.|-.||.|.+-.
T Consensus 5 Fm~VKCp~C~niq 17 (66)
T 1qxf_A 5 FVKVKCPDCEHEQ 17 (66)
T ss_dssp EEEEECTTTCCEE
T ss_pred eEEEECCCCCCce
Confidence 8899999998754
No 319
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=25.80 E-value=64 Score=20.17 Aligned_cols=20 Identities=5% Similarity=-0.086 Sum_probs=12.7
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 029265 8 KNHATLILQSALLCFFVFNS 27 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (196)
|+...++.++++++.|+++.
T Consensus 17 RiGGLifA~vLfi~GI~iil 36 (72)
T 2jo1_A 17 QIGGLVIAGILFILGILIVL 36 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hccchHHHHHHHHHHHHHHH
Confidence 45566777777777555554
No 320
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=25.57 E-value=58 Score=25.29 Aligned_cols=38 Identities=8% Similarity=0.140 Sum_probs=29.1
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
+.|..|.---||.|....+.+.++.++|.+ +++++...
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS 74 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLS 74 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEE
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEE
Confidence 445566777899999999999998888763 57777653
No 321
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=24.30 E-value=28 Score=15.74 Aligned_cols=16 Identities=19% Similarity=0.258 Sum_probs=11.2
Q ss_pred CCChhhhhhchHHHHH
Q 029265 62 PVCPDSRDAWPPLKQA 77 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~~ 77 (196)
+.|+.|.+.+..-..+
T Consensus 3 ~~C~~C~~~f~~~~~l 18 (29)
T 1ard_A 3 FVCEVCTRAFARQEHL 18 (29)
T ss_dssp CBCTTTCCBCSSHHHH
T ss_pred eECCCCCcccCCHHHH
Confidence 6799998876554433
No 322
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=23.82 E-value=16 Score=16.62 Aligned_cols=12 Identities=17% Similarity=0.531 Sum_probs=9.1
Q ss_pred CCChhhhhhchH
Q 029265 62 PVCPDSRDAWPP 73 (196)
Q Consensus 62 ~~CP~C~~~~~~ 73 (196)
+.|+.|.+.+..
T Consensus 3 ~~C~~C~~~f~~ 14 (29)
T 2m0e_A 3 HKCPHCDKKFNQ 14 (29)
T ss_dssp CCCSSCCCCCCT
T ss_pred CcCCCCCcccCC
Confidence 679999887654
No 323
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=23.68 E-value=63 Score=20.36 Aligned_cols=20 Identities=0% Similarity=-0.097 Sum_probs=13.2
Q ss_pred chhHHHHHHHHHHHHHHHHH
Q 029265 8 KNHATLILQSALLCFFVFNS 27 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~ 27 (196)
|+...++.++++++.|+++.
T Consensus 20 RigGLifA~vLfi~GI~iil 39 (74)
T 2zxe_G 20 RVVGLIVAAVLCVIGIIILL 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred eeccchhHHHHHHHHHHHHH
Confidence 45566777777777666555
No 324
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=23.47 E-value=11 Score=20.40 Aligned_cols=7 Identities=0% Similarity=0.012 Sum_probs=2.8
Q ss_pred hHHHHHH
Q 029265 10 HATLILQ 16 (196)
Q Consensus 10 ~~~~~~~ 16 (196)
..+-+++
T Consensus 10 IaagVvg 16 (35)
T 1iij_A 10 IIATVVG 16 (35)
T ss_dssp HHHHHHH
T ss_pred eHHHHHH
Confidence 3344444
No 325
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=23.43 E-value=24 Score=15.73 Aligned_cols=17 Identities=6% Similarity=-0.033 Sum_probs=11.7
Q ss_pred CCChhhhhhchHHHHHH
Q 029265 62 PVCPDSRDAWPPLKQAL 78 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~~~ 78 (196)
+.|+.|.+.+..-..+.
T Consensus 2 ~~C~~C~k~f~~~~~l~ 18 (27)
T 1znf_A 2 YKCGLCERSFVEKSALS 18 (27)
T ss_dssp CBCSSSCCBCSSHHHHH
T ss_pred ccCCCCCCcCCCHHHHH
Confidence 57999988776554443
No 326
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=23.26 E-value=83 Score=15.84 Aligned_cols=19 Identities=16% Similarity=-0.013 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHHHHHHH
Q 029265 9 NHATLILQSALLCFFVFNS 27 (196)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (196)
..|-+|.++++++.++...
T Consensus 4 tiweviaglvalltflafg 22 (32)
T 2lx0_A 4 TIWEVIAGLVALLTFLAFG 22 (32)
T ss_dssp SSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 3577888888888666554
No 327
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=23.22 E-value=29 Score=17.12 Aligned_cols=17 Identities=18% Similarity=0.391 Sum_probs=12.3
Q ss_pred CCCChhhhhhchHHHHH
Q 029265 61 DPVCPDSRDAWPPLKQA 77 (196)
Q Consensus 61 D~~CP~C~~~~~~l~~~ 77 (196)
.|.|+.|.+.+..-..+
T Consensus 11 ~~~C~~C~k~f~~~~~l 27 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHL 27 (37)
T ss_dssp SBCCTTTCCCBSSHHHH
T ss_pred CccCCCCCcccCcHHHH
Confidence 37899999887655444
No 328
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=22.59 E-value=19 Score=16.33 Aligned_cols=16 Identities=6% Similarity=0.185 Sum_probs=10.9
Q ss_pred CCChhhhhhchHHHHH
Q 029265 62 PVCPDSRDAWPPLKQA 77 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~~ 77 (196)
+.|+.|.+.+.....+
T Consensus 3 ~~C~~C~k~f~~~~~l 18 (29)
T 2m0f_A 3 LKCRECGKQFTTSGNL 18 (29)
T ss_dssp EECTTTSCEESCHHHH
T ss_pred ccCCCCCCccCChhHH
Confidence 5799998877554433
No 329
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=28.12 E-value=18 Score=16.65 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=11.1
Q ss_pred CCChhhhhhchHHHHH
Q 029265 62 PVCPDSRDAWPPLKQA 77 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~~ 77 (196)
+.|+.|.+.+.....+
T Consensus 3 ~~C~~C~k~f~~~~~l 18 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSL 18 (29)
Confidence 6799998876554433
No 330
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=22.28 E-value=74 Score=23.87 Aligned_cols=38 Identities=11% Similarity=0.099 Sum_probs=27.4
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCC-cEEEEEEe
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGP-HVSLVVHL 91 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~-~v~~~~~~ 91 (196)
+.|..|.---||.|..-.+.+.++.++|.+ +++++...
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS 72 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFS 72 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEE
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 444444455799999998999888888763 57777653
No 331
>1pfi_A Major coat protein of PF1 virus; complex(viral coat protein/DNA), helical virus; HET: DC; 3.00A {Pseudomonas phage PF1} SCOP: h.1.4.1 PDB: 1ifn_A 1ifm_A* 1pjf_A 1ql1_A 1ql2_A 1zn5_A 2ifm_A 2ifn_A 2klv_A 2ksj_A 2xkm_A 3ifm_A 4ifm_A
Probab=22.14 E-value=72 Score=17.77 Aligned_cols=16 Identities=13% Similarity=0.121 Sum_probs=10.6
Q ss_pred chhHHHHHHHHHHHHH
Q 029265 8 KNHATLILQSALLCFF 23 (196)
Q Consensus 8 ~~~~~~~~~~~~~~~~ 23 (196)
|+....||+.++++++
T Consensus 20 ~si~~~IVGaLvil~V 35 (46)
T 1pfi_A 20 KAIGGYIVGALVILAV 35 (46)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566778877776543
No 332
>2npb_A Selenoprotein W; structure, thioredoxin-like fold, oxidoreductase; NMR {Mus musculus}
Probab=21.83 E-value=1.5e+02 Score=19.42 Aligned_cols=40 Identities=5% Similarity=0.120 Sum_probs=26.1
Q ss_pred eEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEEEecC
Q 029265 54 IIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVVHLLP 93 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~~~~p 93 (196)
++|.+-+=-.|.|=.++...-+.+++.|++++.+.....|
T Consensus 3 ~~V~I~YC~~C~y~~ra~~laqeLl~~Fp~~l~V~~~l~p 42 (96)
T 2npb_A 3 LAVRVVYSGACGYKPKYLQLKEKLEHEFPGCLDICGEGTP 42 (96)
T ss_dssp EEEEEECCCCSCHHHHHHHHHHHHHHHSBTTEEEEECCCS
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHHHhCCcceEEEEEEcC
Confidence 4555555455555555555556788889888887776554
No 333
>2hlg_A Fruit-specific protein; beta antiparallel, plant protein; NMR {Lycopersicon esculentum}
Probab=21.68 E-value=15 Score=19.85 Aligned_cols=8 Identities=13% Similarity=0.592 Sum_probs=5.9
Q ss_pred CCChhhhh
Q 029265 62 PVCPDSRD 69 (196)
Q Consensus 62 ~~CP~C~~ 69 (196)
-.||||+.
T Consensus 16 TlC~wCK~ 23 (39)
T 2hlg_A 16 TLCQFCKE 23 (39)
T ss_dssp SSCCEEEE
T ss_pred Eeccccee
Confidence 46999974
No 334
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.57 E-value=12 Score=23.10 Aligned_cols=13 Identities=23% Similarity=0.501 Sum_probs=10.9
Q ss_pred EecCCCChhhhhh
Q 029265 58 AFFDPVCPDSRDA 70 (196)
Q Consensus 58 ~f~D~~CP~C~~~ 70 (196)
.|.|-.||.|.+-
T Consensus 12 ~Fm~VkCp~C~~~ 24 (63)
T 3j20_W 12 RFLRVKCIDCGNE 24 (63)
T ss_dssp CEEEEECSSSCCE
T ss_pred cEEEEECCCCCCe
Confidence 4889999999874
No 335
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.22 E-value=19 Score=23.39 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=12.5
Q ss_pred eEEEEecCCCChhhhhh
Q 029265 54 IIIEAFFDPVCPDSRDA 70 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~ 70 (196)
+.+.....+.||+|.+.
T Consensus 28 ie~~q~~ky~CpfCGk~ 44 (83)
T 3j21_i 28 VEAKMRQKHTCPVCGRK 44 (83)
T ss_dssp HHHHHHSCBCCSSSCSS
T ss_pred HHHHhhcccCCCCCCCc
Confidence 44455668999999875
No 336
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.03 E-value=35 Score=16.57 Aligned_cols=17 Identities=6% Similarity=0.133 Sum_probs=12.2
Q ss_pred CCCChhhhhhchHHHHH
Q 029265 61 DPVCPDSRDAWPPLKQA 77 (196)
Q Consensus 61 D~~CP~C~~~~~~l~~~ 77 (196)
.+.|+.|.+.+.....+
T Consensus 9 ~~~C~~C~k~f~~~~~l 25 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTL 25 (36)
T ss_dssp SCBCTTTCCBCSSHHHH
T ss_pred CeecCcCCCCcCchHHH
Confidence 37899999887654444
No 337
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=20.84 E-value=24 Score=20.19 Aligned_cols=10 Identities=30% Similarity=0.441 Sum_probs=7.9
Q ss_pred CCCChhhhhh
Q 029265 61 DPVCPDSRDA 70 (196)
Q Consensus 61 D~~CP~C~~~ 70 (196)
|+.||-|..-
T Consensus 30 dw~CP~Cg~~ 39 (46)
T 6rxn_A 30 DWCCPVCGVS 39 (46)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCcCCCCc
Confidence 5699999864
No 338
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=26.12 E-value=21 Score=16.42 Aligned_cols=15 Identities=13% Similarity=0.231 Sum_probs=10.6
Q ss_pred CCChhhhhhchHHHH
Q 029265 62 PVCPDSRDAWPPLKQ 76 (196)
Q Consensus 62 ~~CP~C~~~~~~l~~ 76 (196)
+.|+.|.+.+.....
T Consensus 4 ~~C~~C~k~f~~~~~ 18 (30)
T 2lvr_A 4 YVCIHCQRQFADPGA 18 (30)
Confidence 689999887655443
No 339
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=20.61 E-value=1.4e+02 Score=20.29 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=25.0
Q ss_pred CCeEEEEecCCCChhhhhhchHHHHHHHhcCCcEEEEE
Q 029265 52 DAIIIEAFFDPVCPDSRDAWPPLKQALQHYGPHVSLVV 89 (196)
Q Consensus 52 a~vtI~~f~D~~CP~C~~~~~~l~~~~~~y~~~v~~~~ 89 (196)
.++.|+-|++-.|..| .+.+.++.+.+ ++++|..
T Consensus 39 ~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~ 72 (124)
T 2l4c_A 39 TEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGI 72 (124)
T ss_dssp SSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEE
T ss_pred CCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEE
Confidence 5788998988777777 45666777776 6777754
No 340
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=20.59 E-value=23 Score=23.49 Aligned_cols=17 Identities=12% Similarity=0.071 Sum_probs=12.5
Q ss_pred eEEEEecCCCChhhhhh
Q 029265 54 IIIEAFFDPVCPDSRDA 70 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~ 70 (196)
+.+.....+.||+|.+.
T Consensus 29 ie~~q~~ky~CpfCgk~ 45 (92)
T 3izc_m 29 LEIQQHARYDCSFCGKK 45 (92)
T ss_dssp HHHHHHSCCCCSSSCSS
T ss_pred HHHHHhcCCcCCCCCCc
Confidence 34455678999999865
No 341
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=25.96 E-value=21 Score=15.95 Aligned_cols=14 Identities=14% Similarity=0.230 Sum_probs=10.0
Q ss_pred CCChhhhhhchHHH
Q 029265 62 PVCPDSRDAWPPLK 75 (196)
Q Consensus 62 ~~CP~C~~~~~~l~ 75 (196)
+.|+.|.+.+..-.
T Consensus 3 ~~C~~C~k~f~~~~ 16 (26)
T 2lvu_A 3 YVCERCGKRFVQSS 16 (26)
Confidence 67999988765543
No 342
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=20.41 E-value=24 Score=23.37 Aligned_cols=17 Identities=6% Similarity=0.028 Sum_probs=12.6
Q ss_pred eEEEEecCCCChhhhhh
Q 029265 54 IIIEAFFDPVCPDSRDA 70 (196)
Q Consensus 54 vtI~~f~D~~CP~C~~~ 70 (196)
+.+.....+.||+|.+.
T Consensus 29 ie~~q~~ky~CpfCgk~ 45 (92)
T 3iz5_m 29 MEVSQHSKYFCEFCGKF 45 (92)
T ss_dssp HHHHHHSCBCCTTTCSS
T ss_pred HHHHHhccccCcccCCC
Confidence 34445678999999876
Done!