Your job contains 1 sequence.
>029266
MGNKLAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQR
EEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ
LRAFINSSSDNPANVDVILEYLGKSHGIQRTTELALKHASLAAAAIDSLPETHDVDATNA
RTALVHITQKIITRNK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029266
(196 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062315 - symbol:GPS1 "geranyl diphosphate syn... 549 4.9e-53 1
UNIPROTKB|F6RJN8 - symbol:PDSS1 "Uncharacterized protein"... 325 1.2e-35 2
MGI|MGI:1889278 - symbol:Pdss1 "prenyl (solanesyl) diphos... 317 8.1e-35 2
UNIPROTKB|F1RTW8 - symbol:PDSS1 "Uncharacterized protein"... 312 2.7e-34 2
UNIPROTKB|Q5T2R2 - symbol:PDSS1 "Decaprenyl-diphosphate s... 311 3.4e-34 2
UNIPROTKB|F1PV51 - symbol:PDSS1 "Uncharacterized protein"... 311 5.6e-34 2
ZFIN|ZDB-GENE-030131-4430 - symbol:pdss1 "prenyl (decapre... 312 2.4e-33 2
UNIPROTKB|E1BZW8 - symbol:PDSS1 "Uncharacterized protein"... 310 4.9e-33 2
CGD|CAL0005672 - symbol:orf19.7478 species:5476 "Candida ... 297 1.2e-32 2
DICTYBASE|DDB_G0280293 - symbol:coq1 "trans-prenyltransfe... 297 2.5e-32 2
ASPGD|ASPL0000038406 - symbol:AN10340 species:162425 "Eme... 275 8.7e-31 2
FB|FBgn0051005 - symbol:qless "qless" species:7227 "Droso... 292 1.1e-28 2
TAIR|locus:2020362 - symbol:SPS2 "solanesyl diphosphate s... 271 2.1e-28 2
WB|WBGene00000761 - symbol:coq-1 species:6239 "Caenorhabd... 256 1.0e-26 2
SGD|S000000207 - symbol:COQ1 "Hexaprenyl pyrophosphate sy... 295 8.9e-26 1
POMBASE|SPBPJ4664.01 - symbol:dps1 "decaprenyl diphosphat... 267 3.8e-23 1
TAIR|locus:2202940 - symbol:SPS1 "solanesyl diphosphate s... 258 5.7e-22 1
UNIPROTKB|H0YEE6 - symbol:PDSS1 "Decaprenyl-diphosphate s... 236 7.2e-20 1
GENEDB_PFALCIPARUM|PFB0130w - symbol:PFB0130w "polyprenyl... 192 7.6e-18 2
UNIPROTKB|O96130 - symbol:OPP "Octaprenyl pyrophosphate s... 192 7.6e-18 2
UNIPROTKB|P55785 - symbol:hepT "Heptaprenyl diphosphate s... 186 2.8e-17 2
TIGR_CMR|BA_1535 - symbol:BA_1535 "heptaprenyl diphosphat... 186 4.4e-17 2
TIGR_CMR|DET_0389 - symbol:DET_0389 "heptaprenyl diphosph... 187 1.3e-16 2
UNIPROTKB|I3LJ49 - symbol:I3LJ49 "Uncharacterized protein... 205 1.4e-16 1
UNIPROTKB|P31114 - symbol:hepT "Heptaprenyl diphosphate s... 190 1.6e-16 2
UNIPROTKB|Q9KUT1 - symbol:VC_0434 "Octaprenyl-diphosphate... 174 2.2e-15 2
TIGR_CMR|VC_0434 - symbol:VC_0434 "octaprenyl-diphosphate... 174 2.2e-15 2
UNIPROTKB|O66129 - symbol:hexs-b "Hexaprenyl-diphosphate ... 169 3.5e-14 2
UNIPROTKB|Q3ACT5 - symbol:hepT "Heptaprenyl diphosphate s... 183 6.9e-14 1
TIGR_CMR|CHY_1206 - symbol:CHY_1206 "heptaprenyl diphosph... 183 6.9e-14 1
TIGR_CMR|CJE_0645 - symbol:CJE_0645 "polyprenyl synthetas... 180 9.9e-14 1
TIGR_CMR|SO_3653 - symbol:SO_3653 "octaprenyl-diphosphate... 174 7.7e-13 1
TIGR_CMR|CBU_0382 - symbol:CBU_0382 "octylprenyl diphosph... 137 2.3e-12 2
UNIPROTKB|O06428 - symbol:grcC1 "Heptaprenyl diphosphate ... 168 3.7e-12 1
TIGR_CMR|GSU_1317 - symbol:GSU_1317 "octaprenyl-diphospha... 167 4.2e-12 1
TIGR_CMR|CPS_4513 - symbol:CPS_4513 "octaprenyl-diphospha... 166 5.7e-12 1
TIGR_CMR|ECH_0088 - symbol:ECH_0088 "octaprenyl-diphospha... 164 9.4e-12 1
UNIPROTKB|P0AD57 - symbol:ispB "IspB" species:83333 "Esch... 160 2.6e-11 1
UNIPROTKB|Q3AAM7 - symbol:CHY_1988 "Geranyltranstransfera... 154 9.1e-11 1
TIGR_CMR|CHY_1988 - symbol:CHY_1988 "geranyltranstransfer... 154 9.1e-11 1
UNIPROTKB|Q3IPL1 - symbol:idsA3 "Geranylfarnesyl diphosph... 135 9.5e-11 2
UNIPROTKB|Q5LX97 - symbol:ddsA "Decaprenyl diphosphate sy... 154 1.3e-10 1
TIGR_CMR|SPO_0319 - symbol:SPO_0319 "decaprenyl diphospha... 154 1.3e-10 1
UNIPROTKB|P0A5H8 - symbol:MT3506 "(2E,6E)-farnesyl diphos... 134 1.4e-10 2
TIGR_CMR|APH_1247 - symbol:APH_1247 "octaprenyl-diphospha... 149 4.1e-10 1
UNIPROTKB|Q74CA9 - symbol:GSU1765 "Trans-isoprenyl diphos... 148 4.4e-10 1
TIGR_CMR|GSU_1765 - symbol:GSU_1765 "geranyltranstransfer... 148 4.4e-10 1
TIGR_CMR|NSE_0238 - symbol:NSE_0238 "polyprenyl synthetas... 124 1.6e-09 2
FB|FBgn0037044 - symbol:CG10585 species:7227 "Drosophila ... 119 9.1e-09 2
TAIR|locus:2093832 - symbol:AT3G29430 species:3702 "Arabi... 122 5.2e-07 2
UNIPROTKB|I3LGK0 - symbol:PDSS2 "Uncharacterized protein"... 93 5.4e-07 2
UNIPROTKB|Q81M53 - symbol:ispA "Geranyltranstransferase" ... 118 5.9e-07 2
TIGR_CMR|BA_4402 - symbol:BA_4402 "geranyltranstransferas... 118 5.9e-07 2
UNIPROTKB|A6QR05 - symbol:PDSS2 "PDSS2 protein" species:9... 97 8.9e-07 2
UNIPROTKB|F1NMS4 - symbol:PDSS2 "Uncharacterized protein"... 91 1.2e-06 2
TAIR|locus:2079028 - symbol:AT3G32040 species:3702 "Arabi... 118 2.0e-06 2
UNIPROTKB|Q9UWR6 - symbol:fgs "Geranylfarnesyl diphosphat... 119 2.1e-06 2
RGD|1359372 - symbol:Pdss2 "prenyl (decaprenyl) diphospha... 95 2.2e-06 2
UNIPROTKB|Q5U2R1 - symbol:Pdss2 "Decaprenyl-diphosphate s... 95 2.2e-06 2
UNIPROTKB|Q86YH6 - symbol:PDSS2 "Decaprenyl-diphosphate s... 93 2.9e-06 2
UNIPROTKB|P22939 - symbol:ispA "geranyl diphosphate synth... 117 3.5e-06 2
ZFIN|ZDB-GENE-040718-43 - symbol:pdss2 "prenyl (decapreny... 89 6.1e-06 2
TAIR|locus:2046283 - symbol:AT2G18620 species:3702 "Arabi... 109 6.9e-06 2
UNIPROTKB|P80042 - symbol:GGPS1 "Geranylgeranyl pyrophosp... 117 7.7e-06 2
TAIR|locus:2087550 - symbol:AT3G20160 species:3702 "Arabi... 122 8.4e-06 1
UNIPROTKB|J9NVK1 - symbol:PDSS2 "Uncharacterized protein"... 89 9.5e-06 2
UNIPROTKB|Q8PYS1 - symbol:MM_0789 "Geranylfarnesyl diphos... 115 1.1e-05 2
MGI|MGI:1918615 - symbol:Pdss2 "prenyl (solanesyl) diphos... 88 1.3e-05 2
TIGR_CMR|CPS_1089 - symbol:CPS_1089 "geranyltranstransfer... 118 2.3e-05 1
TAIR|locus:2089626 - symbol:AT3G14530 "AT3G14530" species... 119 2.4e-05 1
UNIPROTKB|O50410 - symbol:idsB "Geranylgeranyl diphosphat... 116 5.6e-05 1
UNIPROTKB|Q4K5A6 - symbol:ispA "Geranyltranstransferase" ... 114 7.5e-05 1
UNIPROTKB|Q0C153 - symbol:ispA "Geranyltranstransferase" ... 102 0.00014 2
TAIR|locus:2048993 - symbol:GGPS2 "geranylgeranyl pyropho... 113 0.00016 1
TAIR|locus:2010182 - symbol:GGPS6 "geranylgeranyl pyropho... 112 0.00018 1
TAIR|locus:2115450 - symbol:GGPS1 "geranylgeranyl pyropho... 111 0.00028 1
>TAIR|locus:2062315 [details] [associations]
symbol:GPS1 "geranyl diphosphate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0004161 "dimethylallyltranstransferase activity"
evidence=IGI;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009536 "plastid" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0004659 "prenyltransferase activity"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 GO:GO:0009507
EMBL:CP002685 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0006744 GO:GO:0009790 EMBL:AC004077
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347 GO:GO:0004659
OMA:KPSVNAL GO:GO:0052924 EMBL:Y17376 EMBL:AY093006 EMBL:BT020524
IPI:IPI00537358 IPI:IPI00538487 IPI:IPI00657038 PIR:A84759
RefSeq:NP_001031483.1 RefSeq:NP_850234.1 UniGene:At.25503 PDB:3APZ
PDB:3AQ0 PDBsum:3APZ PDBsum:3AQ0 ProteinModelPortal:Q5HZ00
SMR:Q5HZ00 STRING:Q5HZ00 PRIDE:Q5HZ00 EnsemblPlants:AT2G34630.2
GeneID:818028 KEGG:ath:AT2G34630 TAIR:At2g34630 InParanoid:Q8RWM1
KO:K14066 ProtClustDB:PLN02890 EvolutionaryTrace:Q9FT89
Genevestigator:Q5HZ00 Uniprot:Q5HZ00
Length = 422
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 111/192 (57%), Positives = 136/192 (70%)
Query: 5 LAILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVA 64
L A + L++ + + S M+ YMQKTY KTA+L+SNSCKAVA L+GQ EVA
Sbjct: 231 LLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVA 290
Query: 65 TLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAF 124
LAFEYG+NLGLA+QLIDDILDFTGTSASLGK SL+D+R+G+ITAPILFAMEEFPQLR
Sbjct: 291 VLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQLREV 350
Query: 125 INSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTAL 184
++ +P NVD+ LEYLGKS GIQR E I SLPET + D +R AL
Sbjct: 351 VDQVEKDPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRAL 410
Query: 185 VHITQKIITRNK 196
+ +T ++ITRNK
Sbjct: 411 IDLTHRVITRNK 422
>UNIPROTKB|F6RJN8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:DAAA02035357 EMBL:DAAA02035358 EMBL:DAAA02035359
IPI:IPI00701533 UniGene:Bt.52184 ProteinModelPortal:F6RJN8
Ensembl:ENSBTAT00000008576 Uniprot:F6RJN8
Length = 418
Score = 325 (119.5 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 67/184 (36%), Positives = 110/184 (59%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 241 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGK 300
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 132
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I +P
Sbjct: 301 NVGIAFQLIDDVLDFTSCSEQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFGSP 360
Query: 133 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 192
+VD L+Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 361 GDVDRALQYVLQSDGVQQTTYLAQRYCHKAVSEISKLRPSPE------RDALIQLSEMVL 414
Query: 193 TRNK 196
TR+K
Sbjct: 415 TRDK 418
Score = 76 (31.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G K A+LAGDL++S A +ALA + +T VI
Sbjct: 203 GEKKAVLAGDLILSAASIALARIGNTTVI 231
>MGI|MGI:1889278 [details] [associations]
symbol:Pdss1 "prenyl (solanesyl) diphosphate synthase,
subunit 1" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IDA] [GO:0051290 "protein heterotetramerization"
evidence=IPI] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 MGI:MGI:1889278 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0006744 UniGene:Mm.249752 GO:GO:0046982 GO:GO:0051290
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:23590 HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH BRENDA:2.5.1.11
EMBL:AB210841 EMBL:CT030013 EMBL:BC026820 EMBL:BC107273
EMBL:BC107274 EMBL:AF118855 IPI:IPI00123984 RefSeq:NP_062374.2
ProteinModelPortal:Q33DR2 SMR:Q33DR2 STRING:Q33DR2
PhosphoSite:Q33DR2 PRIDE:Q33DR2 Ensembl:ENSMUST00000053729
GeneID:56075 KEGG:mmu:56075 UCSC:uc008inq.1 InParanoid:Q33DR2
NextBio:311864 Bgee:Q33DR2 Genevestigator:Q33DR2
GermOnline:ENSMUSG00000026784 Uniprot:Q33DR2
Length = 409
Score = 317 (116.6 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 69/185 (37%), Positives = 108/185 (58%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 232 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 291
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 132
N+G+A+QLIDD+LDFT S +GK + DL+ GI T P+LFA ++FP++ A I P
Sbjct: 292 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLP 351
Query: 133 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSL-PETHDVDATNARTALVHITQKI 191
+VD +Y+ +S G+Q+TT I L P T R AL+ +++ +
Sbjct: 352 GDVDRARQYVLQSDGVQQTTYLAQQYCHKAVREIRKLRPSTE-------RDALIQLSESV 404
Query: 192 ITRNK 196
+TR+K
Sbjct: 405 LTRDK 409
Score = 76 (31.8 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G K A+LAGDL++S A VALA + +T V+
Sbjct: 194 GEKKAVLAGDLILSAASVALARIGNTAVV 222
>UNIPROTKB|F1RTW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 OMA:QQFPELH EMBL:CU571224
Ensembl:ENSSSCT00000012105 Uniprot:F1RTW8
Length = 410
Score = 312 (114.9 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 66/184 (35%), Positives = 108/184 (58%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 233 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPAVHEIAYQYGK 292
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 132
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I P
Sbjct: 293 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLP 352
Query: 133 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 192
+VD +Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 353 GDVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSPE------REALIQLSEIVL 406
Query: 193 TRNK 196
TR+K
Sbjct: 407 TRDK 410
Score = 76 (31.8 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G K A+LAGDL++S A +ALA + +T VI
Sbjct: 195 GEKKAVLAGDLILSAASIALARIGNTTVI 223
>UNIPROTKB|Q5T2R2 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744
"ubiquinone biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
EMBL:AL390961 GO:GO:0046982 GO:GO:0051290 eggNOG:COG0142
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0050347 EMBL:AF118395 EMBL:AB210838
EMBL:AK223414 EMBL:BC049211 EMBL:BC063635 IPI:IPI00440542
IPI:IPI00456157 IPI:IPI00719538 RefSeq:NP_055132.2
UniGene:Hs.558468 ProteinModelPortal:Q5T2R2 SMR:Q5T2R2
STRING:Q5T2R2 PhosphoSite:Q5T2R2 DMDM:74744657 PaxDb:Q5T2R2
PRIDE:Q5T2R2 Ensembl:ENST00000376203 Ensembl:ENST00000376215
GeneID:23590 KEGG:hsa:23590 UCSC:uc001isv.3 UCSC:uc001isw.3
CTD:23590 GeneCards:GC10P026986 HGNC:HGNC:17759 HPA:HPA038032
MIM:607429 MIM:614651 neXtProt:NX_Q5T2R2 Orphanet:254898
PharmGKB:PA134982512 HOVERGEN:HBG054389 InParanoid:Q5T2R2 KO:K12504
OMA:QQFPELH OrthoDB:EOG4TQM94 BioCyc:MetaCyc:HS07530-MONOMER
BRENDA:2.5.1.11 GenomeRNAi:23590 NextBio:46232 ArrayExpress:Q5T2R2
Bgee:Q5T2R2 CleanEx:HS_PDSS1 Genevestigator:Q5T2R2
GermOnline:ENSG00000148459 Uniprot:Q5T2R2
Length = 415
Score = 311 (114.5 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 66/184 (35%), Positives = 108/184 (58%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 238 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 297
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 132
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I P
Sbjct: 298 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLP 357
Query: 133 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 192
+VD +Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 358 GDVDRARQYVLQSDGVQQTTYLAQQYCHEAIREISKLRPSPE------RDALIQLSEIVL 411
Query: 193 TRNK 196
TR+K
Sbjct: 412 TRDK 415
Score = 76 (31.8 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G K A+LAGDL++S A +ALA + +T VI
Sbjct: 200 GEKKAVLAGDLILSAASIALARIGNTTVI 228
>UNIPROTKB|F1PV51 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051290 "protein heterotetramerization"
evidence=IEA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0051290 GeneTree:ENSGT00530000063378
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0050347 OMA:QQFPELH EMBL:AAEX03001171
Ensembl:ENSCAFT00000006952 Uniprot:F1PV51
Length = 365
Score = 311 (114.5 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 66/184 (35%), Positives = 108/184 (58%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 188 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 247
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 132
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++FP++ A I P
Sbjct: 248 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPEMNAMIMRRFSLP 307
Query: 133 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 192
+VD +Y+ +S G+Q+TT I L + + R AL+ +++ ++
Sbjct: 308 GDVDRARQYVLQSDGVQQTTYLAQRYCHEAIREISKLRPSAE------RDALIQLSEIVL 361
Query: 193 TRNK 196
TR+K
Sbjct: 362 TRDK 365
Score = 74 (31.1 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G K A+LAGDL++S A +ALA + +T VI
Sbjct: 150 GEKKAVLAGDLILSAASMALARIGNTTVI 178
>ZFIN|ZDB-GENE-030131-4430 [details] [associations]
symbol:pdss1 "prenyl (decaprenyl) diphosphate
synthase, subunit 1" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 ZFIN:ZDB-GENE-030131-4430
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG0142 GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:23590
HOVERGEN:HBG054389 KO:K12504 OMA:QQFPELH OrthoDB:EOG4TQM94
EMBL:CR385039 EMBL:BC093175 IPI:IPI00493659 RefSeq:NP_001017656.1
UniGene:Dr.78018 STRING:Q567H1 Ensembl:ENSDART00000040865
GeneID:550349 KEGG:dre:550349 InParanoid:Q567H1 NextBio:20879604
Uniprot:Q567H1
Length = 411
Score = 312 (114.9 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 65/184 (35%), Positives = 108/184 (58%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ + Y++KT+ KTA+L++NSCKAV+ L EV +A++YG+
Sbjct: 234 LVRGEFMQLGSKENENERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVHEIAYQYGR 293
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 132
N+G+A+QL+DDILDFT + LGK S DL+ G+ T P+LFA ++FP+L + I +
Sbjct: 294 NVGIAFQLVDDILDFTSNANCLGKPSAADLKLGLATGPVLFACQQFPELHSMIMRRFSSD 353
Query: 133 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 192
+VD +Y+ KS G+++T I L + + R AL+ +T+ ++
Sbjct: 354 GDVDRAWQYVLKSDGVEQTNYLAQHYCQEAIRQISRLRPSSE------RDALIRLTELVL 407
Query: 193 TRNK 196
R+K
Sbjct: 408 RRDK 411
Score = 67 (28.6 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G + AILAGD ++S A +ALA + +T V+
Sbjct: 196 GERKAILAGDFILSAASMALARIGNTTVV 224
>UNIPROTKB|E1BZW8 [details] [associations]
symbol:PDSS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0051290 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:QQFPELH EMBL:AADN02000555 IPI:IPI00572129
ProteinModelPortal:E1BZW8 Ensembl:ENSGALT00000012224
NextBio:20823389 Uniprot:E1BZW8
Length = 366
Score = 310 (114.2 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 65/184 (35%), Positives = 107/184 (58%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L +V +A++YGK
Sbjct: 189 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSILGCPDPKVHEIAYQYGK 248
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNP 132
N+G+A+QLIDD+LDFT + LGK + DL+ G+ T P+LFA +FP++ A I P
Sbjct: 249 NVGIAFQLIDDVLDFTSCADHLGKPAAADLKLGLATGPVLFACRQFPEMNAMIMRRFSKP 308
Query: 133 ANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKII 192
+V+ +Y+ +S G+Q+TT I L + + R AL+ +T+ ++
Sbjct: 309 GDVERARKYVLQSDGVQQTTYLAQRYCHEATREISKLRPSPE------REALIQLTEMVL 362
Query: 193 TRNK 196
R+K
Sbjct: 363 MRDK 366
Score = 66 (28.3 bits), Expect = 4.9e-33, Sum P(2) = 4.9e-33
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G + A+LAGD ++S A +ALA + +T +I
Sbjct: 151 GERKAVLAGDFILSAASLALARIGNTTII 179
>CGD|CAL0005672 [details] [associations]
symbol:orf19.7478 species:5476 "Candida albicans" [GO:0032476
"decaprenyl diphosphate synthase complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019418 "sulfide oxidation"
evidence=IEA] [GO:0070219 "cellular sulfide ion homeostasis"
evidence=IEA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IEA]
[GO:0008834 "di-trans,poly-cis-decaprenylcistransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 CGD:CAL0005672 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 eggNOG:COG0142
KO:K05355 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AACQ01000039 RefSeq:XP_718635.1 ProteinModelPortal:Q5AAL1
STRING:Q5AAL1 GeneID:3639664 KEGG:cal:CaO19.7478 Uniprot:Q5AAL1
Length = 510
Score = 297 (109.6 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 61/169 (36%), Positives = 100/169 (59%)
Query: 26 HTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDIL 85
+ E E Y+ KTY KTA+L+S SC+A A LSG ++++ +++G+NLGL +Q++DD+L
Sbjct: 346 NVEAAFEYYLHKTYLKTASLMSKSCRAAAVLSGAQDDIIENCYQFGRNLGLCFQIVDDML 405
Query: 86 DFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKS 145
D+T + ++GK S DL+ G+ TAPILFA ++ P+L I + P +V++ + K
Sbjct: 406 DYTSSDKTIGKPSQADLKLGLATAPILFAWKQEPKLGDLIARKFNQPGDVEIARRAVEKY 465
Query: 146 HGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITR 194
G+ +T E + LPE+ AR+AL +T ++TR
Sbjct: 466 DGVAQTKEMATMYCHQALKNLRVLPESE------ARSALELLTNSVLTR 508
Score = 85 (35.0 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 3 NKLAILAGDLLISRALVALASLKHTEVI 30
NK+A+LAGD L+ RA VA+A L++ EVI
Sbjct: 236 NKMAVLAGDFLLGRASVAIARLRNPEVI 263
>DICTYBASE|DDB_G0280293 [details] [associations]
symbol:coq1 "trans-prenyltransferase" species:44689
"Dictyostelium discoideum" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0006743 "ubiquinone metabolic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
dictyBase:DDB_G0280293 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GenomeReviews:CM000152_GR
GO:GO:0046872 EMBL:AAFI02000035 GO:GO:0006744 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0006743 RefSeq:XP_641356.1 HSSP:Q9WY08
ProteinModelPortal:Q54VJ9 STRING:Q54VJ9 EnsemblProtists:DDB0231590
GeneID:8622490 KEGG:ddi:DDB_G0280293 OMA:RIRPTIV Uniprot:Q54VJ9
Length = 456
Score = 297 (109.6 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 60/168 (35%), Positives = 97/168 (57%)
Query: 29 VIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFT 88
V + Y+QKTY KT +L++NSC++ A LSG + ++ E+GKNLGLA+Q++DD+LD+T
Sbjct: 295 VSFDNYLQKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYT 354
Query: 89 GTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGI 148
G++ GKA+ DL G+ TAP+L+A +EFPQL I +V+ + S GI
Sbjct: 355 GSAEECGKATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGI 414
Query: 149 QRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITRNK 196
++T + LP++ +R L+ ++ ++TR K
Sbjct: 415 EKTRNLAIEYCNRAIQSLLKLPQSE------SRDLLITLSHIVVTRTK 456
Score = 76 (31.8 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 NKLAILAGDLLISRALVALASLKHTEVIMEC 33
NKLAIL GD L++RA V L+++++ +V EC
Sbjct: 244 NKLAILCGDYLLARASVVLSTIRNPDVT-EC 273
>ASPGD|ASPL0000038406 [details] [associations]
symbol:AN10340 species:162425 "Emericella nidulans"
[GO:0032476 "decaprenyl diphosphate synthase complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0016209 "antioxidant
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IEA]
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0019418 "sulfide oxidation" evidence=IEA]
[GO:0070219 "cellular sulfide ion homeostasis" evidence=IEA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:BN001306
GO:GO:0006744 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 ProteinModelPortal:C8VJN5
EnsemblFungi:CADANIAT00010341 OMA:YLHKTYL Uniprot:C8VJN5
Length = 456
Score = 275 (101.9 bits), Expect = 8.7e-31, Sum P(2) = 8.7e-31
Identities = 57/170 (33%), Positives = 94/170 (55%)
Query: 27 TEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 86
T+ + Y+QKTY KTA+L+S SC+A A L +V A+ YG+NLGLA+QL+DD+LD
Sbjct: 293 TDDTISYYLQKTYLKTASLISKSCRAAALLGHSTPDVVEAAYSYGRNLGLAFQLVDDMLD 352
Query: 87 FTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSH 146
+T + LGK + DL G+ TAP+LFA ++ P+L + +V+ E + +++
Sbjct: 353 YTVSGVELGKPAGADLELGLATAPLLFAWKQHPELGPLVGRKFCREGDVEKARELVYRAN 412
Query: 147 GIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITRNK 196
G+++T I P++ A+ L+ + +K + R K
Sbjct: 413 GVEQTRALAQEYADKAIAAISPFPDSE------AKAGLIEMCRKTMNRRK 456
Score = 87 (35.7 bits), Expect = 8.7e-31, Sum P(2) = 8.7e-31
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEV 29
GNK+A+LAGD L+ RA VALA L+ EV
Sbjct: 234 GNKMAVLAGDFLLGRASVALARLRDPEV 261
>FB|FBgn0051005 [details] [associations]
symbol:qless "qless" species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0014019 "neuroblast development"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 EMBL:AE014297 GO:GO:0043066 GO:GO:0033554
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0014019
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 OMA:KPSVNAL
FlyBase:FBgn0051005 EMBL:BT044087 RefSeq:NP_733425.1
UniGene:Dm.5492 SMR:Q9V9Z3 IntAct:Q9V9Z3 MINT:MINT-1009288
STRING:Q9V9Z3 EnsemblMetazoa:FBtr0085769 GeneID:43697
KEGG:dme:Dmel_CG31005 UCSC:CG31005-RA CTD:43697 InParanoid:Q9V9Z3
GenomeRNAi:43697 NextBio:835306 Uniprot:Q9V9Z3
Length = 436
Score = 292 (107.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 51/118 (43%), Positives = 83/118 (70%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 93
Y+ KTY KTA+L++N+ KA A ++ + VA +AF+YG+N+GLA+QL+DD+LDF ++
Sbjct: 280 YLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGRNIGLAFQLVDDMLDFVSSTEQ 339
Query: 94 LGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRT 151
+GK + DL+ G+ TAP+LFA E++P+L + P +V+ E + KSHG+++T
Sbjct: 340 MGKPTAADLKLGLATAPVLFACEKYPELNPMVMRRFSEPGDVERAFELVHKSHGLEQT 397
Score = 44 (20.5 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 3 NKLAILAGDLLISRALVALASLKHTEV 29
+K +AGD ++S A + +A L+ +V
Sbjct: 222 HKKVTMAGDYILSIASIMIARLRSDDV 248
>TAIR|locus:2020362 [details] [associations]
symbol:SPS2 "solanesyl diphosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IGI;RCA] [GO:0009536 "plastid"
evidence=IDA] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IGI] [GO:0009570 "chloroplast stroma"
evidence=IDA] InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007651 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
OMA:KLYRFGY KO:K05356 ProtClustDB:PLN02857 GO:GO:0052924
PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749 EMBL:AB104727
EMBL:AB188498 EMBL:BT028962 EMBL:BT004246 IPI:IPI00518205
PIR:C86306 RefSeq:NP_173148.2 UniGene:At.43587
ProteinModelPortal:Q76FS5 SMR:Q76FS5 STRING:Q76FS5 PaxDb:Q76FS5
PRIDE:Q76FS5 EnsemblPlants:AT1G17050.1 GeneID:838275
KEGG:ath:AT1G17050 TAIR:At1g17050 InParanoid:Q76FS5
PhylomeDB:Q76FS5 BioCyc:ARA:AT1G17050-MONOMER
BioCyc:MetaCyc:AT1G17050-MONOMER Genevestigator:Q76FS5
Uniprot:Q76FS5
Length = 417
Score = 271 (100.5 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 57/151 (37%), Positives = 89/151 (58%)
Query: 22 ASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLI 81
+SL +V ++ YM K+Y KTA+LV+ S K A S +VA +++GKNLGL++Q++
Sbjct: 249 SSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMYQFGKNLGLSFQVV 308
Query: 82 DDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEY 141
DDILDFT ++ LGK + DL G ITAP++FA+E P+LR I S P +++ +E
Sbjct: 309 DDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRLREIIESEFCEPGSLEEAIEI 368
Query: 142 LGKSHGIQRTTEXXXXXXXXXXXXIDSLPET 172
+ GI++ E ++ LP +
Sbjct: 369 VRNRGGIKKAQELAKEKAELALKNLNCLPRS 399
Score = 64 (27.6 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 13/29 (44%), Positives = 22/29 (75%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G ++A+LAGD + ++A LA+L++ EVI
Sbjct: 202 GTRVAVLAGDFMFAQASWYLANLENLEVI 230
Score = 37 (18.1 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 13 LISRALVALASLKHTEV 29
L+SRA LA LK V
Sbjct: 146 LVSRATAELAGLKELTV 162
>WB|WBGene00000761 [details] [associations]
symbol:coq-1 species:6239 "Caenorhabditis elegans"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IMP] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0040011 GO:GO:0040017 GO:GO:0006744 eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K12504 EMBL:FO080645
PIR:G87775 PIR:T25573 RefSeq:NP_491588.1 ProteinModelPortal:P91093
SMR:P91093 STRING:P91093 PaxDb:P91093 EnsemblMetazoa:C24A11.9
GeneID:172190 KEGG:cel:CELE_C24A11.9 UCSC:C24A11.9 CTD:172190
WormBase:C24A11.9 InParanoid:P91093 OMA:PNRNEST NextBio:874409
Uniprot:P91093
Length = 393
Score = 256 (95.2 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 50/145 (34%), Positives = 85/145 (58%)
Query: 31 MECYMQKTYNKTAALVSNSCKAVAYLS-GQREEVATLAFEYGKNLGLAYQLIDDILDFTG 89
M+ Y++KT+ KTA+L ++SC++ A L+ G ++ +AFEYG+NLG+A+QL DD+LDF
Sbjct: 232 MKAYIEKTHRKTASLFASSCRSAAILADGSDLKLHEIAFEYGRNLGIAFQLADDLLDFIA 291
Query: 90 TSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQ 149
T+ +GK DL+ G+ TAP+L+A E++P+L + + + + E + S G+
Sbjct: 292 TADEMGKPVAADLKLGLATAPVLYACEQYPELNTMLLRKFKHDGDAEKAREIVVNSDGMD 351
Query: 150 RTTEXXXXXXXXXXXXIDSLPETHD 174
+T SLP ++
Sbjct: 352 KTRRLIDSYSQKAVEMASSLPNRNE 376
Score = 62 (26.9 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+++L GD +++RA L S+ +I
Sbjct: 173 GNKMSVLVGDFILARATQILCSIGKPNII 201
>SGD|S000000207 [details] [associations]
symbol:COQ1 "Hexaprenyl pyrophosphate synthetase"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IMP;IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;IMP] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000010 "trans-hexaprenyltranstransferase
activity" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232 SGD:S000000207
GO:GO:0005739 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 EMBL:BK006936 GO:GO:0006744
EMBL:J05547 EMBL:Z35872 EMBL:AY558099 EMBL:Z26494 PIR:A36625
RefSeq:NP_009557.1 ProteinModelPortal:P18900 SMR:P18900
DIP:DIP-1103N IntAct:P18900 MINT:MINT-427151 STRING:P18900
PaxDb:P18900 PRIDE:P18900 EnsemblFungi:YBR003W GeneID:852288
KEGG:sce:YBR003W CYGD:YBR003w eggNOG:COG0142
GeneTree:ENSGT00530000063378 HOGENOM:HOG000009104 KO:K05355
OMA:RASSIFA OrthoDB:EOG4HB1V2 BioCyc:MetaCyc:MONOMER-13702
BRENDA:2.5.1.33 NextBio:970928 Genevestigator:P18900
GermOnline:YBR003W GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Uniprot:P18900
Length = 473
Score = 295 (108.9 bits), Expect = 8.9e-26, P = 8.9e-26
Identities = 73/197 (37%), Positives = 107/197 (54%)
Query: 4 KLAILAGDLLISRALVALASLKHTEVI---MECYMQKTYNKTAALVSNSCKAVAYLSGQR 60
KL + D + L L H ++I E Y+ KTY KTAAL+S SC+ A LSG
Sbjct: 284 KLEVKEHDFRVPSRQQGL-QLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGAS 342
Query: 61 EEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ 120
V +++G+NLG+ +QL+DD+LDFT + LGK S DL+ GI TAP+LFA +E P
Sbjct: 343 PAVIDECYDFGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPS 402
Query: 121 LRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXI-DSLPETHDVDATN 179
L I+ + +V+ ++ + +GI +T + DSLPE+ +
Sbjct: 403 LGPLISRNFSERGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPES------D 456
Query: 180 ARTALVHITQKIITRNK 196
AR+AL +T I+TR K
Sbjct: 457 ARSALEFLTNSILTRRK 473
>POMBASE|SPBPJ4664.01 [details] [associations]
symbol:dps1 "decaprenyl diphosphate synthase subunit
Dps1" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IC] [GO:0006119 "oxidative phosphorylation"
evidence=TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0016209 "antioxidant activity" evidence=IMP]
[GO:0019418 "sulfide oxidation" evidence=IMP] [GO:0019646 "aerobic
electron transport chain" evidence=TAS] [GO:0032476 "decaprenyl
diphosphate synthase complex" evidence=IPI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070219 "cellular sulfide ion
homeostasis" evidence=IMP] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=IMP]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 PomBase:SPBPJ4664.01 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016740 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016209
GO:GO:0019646 GO:GO:0070219 GO:GO:0006119 GO:GO:0019418
GO:GO:0006744 eggNOG:COG0142 HOGENOM:HOG000009104 KO:K05355
OrthoDB:EOG4HB1V2 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0032476 EMBL:D84311 EMBL:D89265 PIR:JC5429
PIR:T43193 RefSeq:NP_595276.1 ProteinModelPortal:O43091
STRING:O43091 EnsemblFungi:SPBPJ4664.01.1 GeneID:2541402
KEGG:spo:SPBPJ4664.01 OMA:KPSVNAL NextBio:20802509 Uniprot:O43091
Length = 378
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 63/190 (33%), Positives = 108/190 (56%)
Query: 7 ILAGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATL 66
++ G+ L + + +SL+ + + Y++K++ KTA+L+S SCKA L VAT
Sbjct: 195 LVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTILGQCSPTVATA 254
Query: 67 AFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFIN 126
A EYG+ +G A+QL+DD+LD+T +LGKA+ DL+ G+ TAP+LFA +++P+L A I
Sbjct: 255 AGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIV 314
Query: 127 SSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVH 186
+ ++P+++ + + I++T + LP++ AR AL
Sbjct: 315 NRFNHPSDIQRARSLVECTDAIEQTITWAKEYIKKAKDSLLCLPDSP------ARKALFA 368
Query: 187 ITQKIITRNK 196
+ K+ITR K
Sbjct: 369 LADKVITRKK 378
>TAIR|locus:2202940 [details] [associations]
symbol:SPS1 "solanesyl diphosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0015979 "photosynthesis" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IGI;IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0006744 "ubiquinone biosynthetic process" evidence=IGI;RCA]
InterPro:IPR000092 InterPro:IPR014120 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 GO:GO:0005783 EMBL:CP002684 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0006744
GO:GO:0015979 EMBL:AC007260 eggNOG:COG0142 HOGENOM:HOG000009104
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
BRENDA:2.5.1.11 EMBL:AB071514 EMBL:AB188497 EMBL:BT025550
EMBL:AK229738 IPI:IPI00525401 IPI:IPI00542022 IPI:IPI00846461
PIR:F96813 RefSeq:NP_001077840.1 RefSeq:NP_177972.2
UniGene:At.34283 ProteinModelPortal:Q8S948 SMR:Q8S948 STRING:Q8S948
PRIDE:Q8S948 EnsemblPlants:AT1G78510.1 GeneID:844187
KEGG:ath:AT1G78510 TAIR:At1g78510 InParanoid:Q8S948 KO:K05356
OMA:EFIVERK ProtClustDB:PLN02857 BioCyc:ARA:AT1G78510-MONOMER
BioCyc:MetaCyc:AT1G78510-MONOMER Genevestigator:Q8S948
GO:GO:0052924 PANTHER:PTHR12001:SF18 TIGRFAMs:TIGR02749
Uniprot:Q8S948
Length = 406
Score = 258 (95.9 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 59/168 (35%), Positives = 93/168 (55%)
Query: 13 LISRALVALAS--LKHTEVIMEC------YMQKTYNKTAALVSNSCKAVAYLSGQREEVA 64
LIS+ + AS +K + +C Y+ K++ KTA+LV+ S K A S +V
Sbjct: 221 LISQVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVT 280
Query: 65 TLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAF 124
+E+GKNLGL++Q++DDILDFT ++ LGK + +DL G +TAP++FA+E P+LR
Sbjct: 281 EQMYEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLREI 340
Query: 125 INSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPET 172
I S +++ +E + K GI+R E + LP +
Sbjct: 341 IESEFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRS 388
>UNIPROTKB|H0YEE6 [details] [associations]
symbol:PDSS1 "Decaprenyl-diphosphate synthase subunit 1"
species:9606 "Homo sapiens" [GO:0008299 "isoprenoid biosynthetic
process" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:AL390961 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HGNC:HGNC:17759 Ensembl:ENST00000491711 Uniprot:H0YEE6
Length = 158
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 45/105 (42%), Positives = 70/105 (66%)
Query: 13 LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGK 72
L+ + L S ++ Y++KT+ KTA+L++NSCKAV+ L V +A++YGK
Sbjct: 41 LVRGEFLQLGSKENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGK 100
Query: 73 NLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
N+G+A+QLIDD+LDFT S +GK + DL+ G+ T P+LFA ++
Sbjct: 101 NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQ 145
>GENEDB_PFALCIPARUM|PFB0130w [details] [associations]
symbol:PFB0130w "polyprenyl synthetase,
putative" species:5833 "Plasmodium falciparum" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 192 (72.6 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 54/183 (29%), Positives = 93/183 (50%)
Query: 26 HTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDIL 85
+ E ++ Y+ K+Y+KTA+L S+ +A LS + + + L F G ++G+A+QL DD L
Sbjct: 356 NVEEALKMYLIKSYHKTASLFSHLFACIAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYL 415
Query: 86 DFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSSSDNPANVDVILEYLGK 144
D+ + K L DL+N I TAP+LF+ PQ + IN +S +++ IL Y+
Sbjct: 416 DYK-IDDNTNKPILNDLKNNIKTAPLLFSYNYNPQVILQLINKNSYTNNDIENILYYIQH 474
Query: 145 SHGIQRTTEXXXXXXXXXXXXIDSL------PET------HDVDATNARTALVHITQKII 192
S+ +++ + SL P T HD D + AL+++ ++
Sbjct: 475 SNSMKKNELCSLLHIKKASDILYSLISHCNKPSTNKNNTKHD-DIKQSSEALINLILNVL 533
Query: 193 TRN 195
+RN
Sbjct: 534 SRN 536
Score = 56 (24.8 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 10/16 (62%), Positives = 15/16 (93%)
Query: 2 GNKLAILAGDLLISRA 17
GNK++IL+GD L++RA
Sbjct: 304 GNKISILSGDYLLARA 319
>UNIPROTKB|O96130 [details] [associations]
symbol:OPP "Octaprenyl pyrophosphate synthase"
species:36329 "Plasmodium falciparum 3D7" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE001362
GenomeReviews:AE001362_GR OMA:RASSIFA GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004659 PIR:F71622
RefSeq:XP_001349541.1 ProteinModelPortal:O96130
EnsemblProtists:PFB0130w:mRNA GeneID:812623 KEGG:pfa:PFB0130w
EuPathDB:PlasmoDB:PF3D7_0202700 HOGENOM:HOG000284224
ProtClustDB:CLSZ2432854 Uniprot:O96130
Length = 538
Score = 192 (72.6 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 54/183 (29%), Positives = 93/183 (50%)
Query: 26 HTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDIL 85
+ E ++ Y+ K+Y+KTA+L S+ +A LS + + + L F G ++G+A+QL DD L
Sbjct: 356 NVEEALKMYLIKSYHKTASLFSHLFACIAILSFKNDTIIQLCFNLGLHIGMAFQLYDDYL 415
Query: 86 DFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSSSDNPANVDVILEYLGK 144
D+ + K L DL+N I TAP+LF+ PQ + IN +S +++ IL Y+
Sbjct: 416 DYK-IDDNTNKPILNDLKNNIKTAPLLFSYNYNPQVILQLINKNSYTNNDIENILYYIQH 474
Query: 145 SHGIQRTTEXXXXXXXXXXXXIDSL------PET------HDVDATNARTALVHITQKII 192
S+ +++ + SL P T HD D + AL+++ ++
Sbjct: 475 SNSMKKNELCSLLHIKKASDILYSLISHCNKPSTNKNNTKHD-DIKQSSEALINLILNVL 533
Query: 193 TRN 195
+RN
Sbjct: 534 SRN 536
Score = 56 (24.8 bits), Expect = 7.6e-18, Sum P(2) = 7.6e-18
Identities = 10/16 (62%), Positives = 15/16 (93%)
Query: 2 GNKLAILAGDLLISRA 17
GNK++IL+GD L++RA
Sbjct: 304 GNKISILSGDYLLARA 319
>UNIPROTKB|P55785 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:1422 "Geobacillus stearothermophilus" [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 InterPro:IPR014119 TIGRFAMs:TIGR02748 EMBL:D49976
ProteinModelPortal:P55785 Uniprot:P55785
Length = 320
Score = 186 (70.5 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 40/142 (28%), Positives = 77/142 (54%)
Query: 31 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 90
+ Y+++ KTA L++ SC+ A +G E + + +G +G+++Q+ DDILDFTGT
Sbjct: 160 LRTYLRRIRRKTALLIAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGT 219
Query: 91 SASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINS--SSDNPANVDVILEYLGKSHGI 148
LGK + +DL G +T P+L+A+ + +++A I + + A + ++ + ++ I
Sbjct: 220 EEQLGKPAGSDLLQGNVTLPVLYALSD-ERVKAAIAAVGPETDVAEMAAVISAIKRTDAI 278
Query: 149 QRTTEXXXXXXXXXXXXIDSLP 170
+R+ +D LP
Sbjct: 279 ERSYALSDRYLDKALHLLDGLP 300
Score = 45 (20.9 bits), Expect = 2.8e-17, Sum P(2) = 2.8e-17
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 3 NKLAILAGDLLISRALVALASL 24
N+ A+ GD L +R+L +A L
Sbjct: 105 NRFAMYTGDYLFARSLERMAEL 126
Score = 36 (17.7 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 14 ISRALVALASLKHTEVIMECYMQK 37
++ L+ +ASL H +VI + +++
Sbjct: 71 VALELIHMASLVHDDVIDDADLRR 94
>TIGR_CMR|BA_1535 [details] [associations]
symbol:BA_1535 "heptaprenyl diphosphate synthase component
II" species:198094 "Bacillus anthracis str. Ames" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 OMA:KLYRFGY ProtClustDB:CLSK873092
InterPro:IPR014119 TIGRFAMs:TIGR02748 RefSeq:NP_843986.1
RefSeq:YP_018158.1 ProteinModelPortal:Q81SV9 DNASU:1087064
EnsemblBacteria:EBBACT00000008063 EnsemblBacteria:EBBACT00000013944
GeneID:1087064 GeneID:2816030 KEGG:ban:BA_1535 KEGG:bar:GBAA_1535
PATRIC:18780664 BioCyc:BANT261594:GJ7F-1560-MONOMER Uniprot:Q81SV9
Length = 320
Score = 186 (70.5 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 45/122 (36%), Positives = 68/122 (55%)
Query: 31 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 90
+ Y+++ KTA L++ SC+ A +G + + F YG +G++YQ+IDDILDF T
Sbjct: 160 LRTYLRRIKRKTALLIAASCQLGAIAAGANRDTVSRLFWYGYFVGMSYQIIDDILDFVST 219
Query: 91 SASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDV--ILEYLGKSHGI 148
LGK + DL G IT P L+AME+ P L I S +N ++ I+E + S I
Sbjct: 220 EEKLGKPAGGDLLQGNITLPALYAMED-PILCKKIRSVHENTTADEMKEIIEAVKNSAAI 278
Query: 149 QR 150
+
Sbjct: 279 DK 280
Score = 43 (20.2 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTE 28
G+++A+ GD L +++L + +++ E
Sbjct: 104 GDRIAMYTGDYLFAKSLECITNIEIPE 130
Score = 39 (18.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 14 ISRALVALASLKHTEVIMECYMQK 37
++ L+ +ASL H +VI ++++
Sbjct: 71 VALELIHMASLVHDDVIDAAFLRR 94
>TIGR_CMR|DET_0389 [details] [associations]
symbol:DET_0389 "heptaprenyl diphosphate synthase
component II" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000027 GenomeReviews:CP000027_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 OMA:EFIVERK
RefSeq:YP_181134.1 ProteinModelPortal:Q3Z9G5 STRING:Q3Z9G5
GeneID:3230282 KEGG:det:DET0389 PATRIC:21607847
ProtClustDB:CLSK837510 BioCyc:DETH243164:GJNF-389-MONOMER
Uniprot:Q3Z9G5
Length = 324
Score = 187 (70.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 49/165 (29%), Positives = 80/165 (48%)
Query: 32 ECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTS 91
E Y+++ KTAAL + K A L+ + YG NLGL++Q++DDILDF G +
Sbjct: 164 ENYLERISGKTAALFVMATKGGAILADASPSDEEIMRSYGYNLGLSFQIVDDILDFVGNA 223
Query: 92 ASLGKASLTDLRNGIITAPILFAMEEFPQLRAFIN--SSSDNPANVDVILEYLGKSHGIQ 149
+GK +DL NG +T P L M+ +P+ + ++D A+V +E + S I
Sbjct: 224 KDMGKPVGSDLNNGTVTLPALLLMDRYPENNPIKDMLGATDRSAHVARAVEMINSSDIID 283
Query: 150 RTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITR 194
+ + + LP+T AR +L + + I+ R
Sbjct: 284 LSYKEAKRYADLACQDLSKLPKTA------ARESLYQLAEFIVER 322
Score = 38 (18.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G + AIL GD L + A A + ++
Sbjct: 107 GLEKAILLGDFLFAHAAEVAAETDNMRIV 135
>UNIPROTKB|I3LJ49 [details] [associations]
symbol:I3LJ49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016740 "transferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GeneTree:ENSGT00530000063378 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 Ensembl:ENSSSCT00000027318 OMA:NNCISEQ
Uniprot:I3LJ49
Length = 145
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 50/151 (33%), Positives = 82/151 (54%)
Query: 48 NSC--KAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNG 105
N+C + V+ L V +A++YGKN+G+A+QLIDD+LDFT S +GK
Sbjct: 9 NNCISEQVSVLGCPDPAVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKX-------- 60
Query: 106 IITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXX 165
+ T P+LFA ++FP++ A I P +VD +Y+ +S G+Q+TT
Sbjct: 61 LATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQRYCHEAIRE 120
Query: 166 IDSLPETHDVDATNARTALVHITQKIITRNK 196
I L + + R AL+ +++ ++TR+K
Sbjct: 121 ISKLRPSPE------REALIQLSEIVLTRDK 145
>UNIPROTKB|P31114 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component 2"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0009234 "menaquinone biosynthetic process" evidence=IMP]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0030435
EMBL:AL009126 GenomeReviews:AL009126_GR EMBL:M80245
HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0016765 KO:K00805 GO:GO:0009234 PIR:E69630
RefSeq:NP_390155.1 ProteinModelPortal:P31114 SMR:P31114
DNASU:939002 EnsemblBacteria:EBBACT00000001536 GeneID:939002
KEGG:bsu:BSU22740 PATRIC:18976359 GenoList:BSU22740 OMA:KLYRFGY
ProtClustDB:CLSK873092 BioCyc:BSUB:BSU22740-MONOMER
BioCyc:MetaCyc:MONOMER-13770 InterPro:IPR014119 TIGRFAMs:TIGR02748
Uniprot:P31114
Length = 348
Score = 190 (71.9 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 45/143 (31%), Positives = 77/143 (53%)
Query: 31 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 90
+ Y+++ KTA L++ SC+ A SG E++ + +G +G++YQ+IDDILDFT T
Sbjct: 188 LRTYLRRIKRKTALLIAVSCQLGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTST 247
Query: 91 SASLGKASLTDLRNGIITAPILFAMEEFPQLR---AFINSSSDNPANVDVILEYLGKSHG 147
LGK DL G +T P+L+A++ P L+ INS + ++ I+E + K+
Sbjct: 248 EEELGKPVGGDLLQGNVTLPVLYALKN-PALKNQLKLINSETTQE-QLEPIIEEIKKTDA 305
Query: 148 IQRTTEXXXXXXXXXXXXIDSLP 170
I+ + +++LP
Sbjct: 306 IEASMAVSEMYLQKAFQKLNTLP 328
Score = 36 (17.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 3 NKLAILAGDLLISRALVALASLKHTEVIMECYMQK 37
NK+ +A ++ ++ +ASL H +VI + +++
Sbjct: 92 NKIKYVA----VTLEMIHMASLVHDDVIDDAELRR 122
>UNIPROTKB|Q9KUT1 [details] [associations]
symbol:VC_0434 "Octaprenyl-diphosphate synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006744 "ubiquinone biosynthetic process" evidence=ISS]
[GO:0009234 "menaquinone biosynthetic process" evidence=ISS]
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 174 (66.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 50/167 (29%), Positives = 79/167 (47%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 93
YMQ Y+KTA L + + A L EV YGK LG A+QLIDD++D+T
Sbjct: 188 YMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDE 247
Query: 94 LGKASLTDLRNGIITAPILFAMEEF-PQLRAFINSS---SDNPANVDVILEYLGKSHGIQ 149
+GK DL G T P+L+AM+ P+ A I + ++ + ++ IL + ++ +Q
Sbjct: 248 MGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQ 307
Query: 150 RTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITRNK 196
T E + LPE+ + AL+ + + R+K
Sbjct: 308 YTIEKALHEADKAIAELAILPESE------YKQALITLAHMAVNRSK 348
Score = 43 (20.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GN ++L GD + +R+ + L +++
Sbjct: 129 GNAASVLVGDFIYTRSFQMMTELGSMKIL 157
>TIGR_CMR|VC_0434 [details] [associations]
symbol:VC_0434 "octaprenyl-diphosphate synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006744 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765 OMA:QQFPELH
KO:K02523 GO:GO:0009234 PIR:A82322 RefSeq:NP_230088.1
ProteinModelPortal:Q9KUT1 DNASU:2615695 GeneID:2615695
KEGG:vch:VC0434 PATRIC:20079947 ProtClustDB:CLSK873977
Uniprot:Q9KUT1
Length = 348
Score = 174 (66.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 50/167 (29%), Positives = 79/167 (47%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 93
YMQ Y+KTA L + + A L EV YGK LG A+QLIDD++D+T
Sbjct: 188 YMQVIYSKTARLFEAATQIGAILCDASPEVELAMQNYGKYLGTAFQLIDDVMDYTSDGDE 247
Query: 94 LGKASLTDLRNGIITAPILFAMEEF-PQLRAFINSS---SDNPANVDVILEYLGKSHGIQ 149
+GK DL G T P+L+AM+ P+ A I + ++ + ++ IL + ++ +Q
Sbjct: 248 MGKNVGDDLAEGKPTLPLLYAMQHGNPEQAAMIREAIEKANGMSRLNEILAAMEQTGSLQ 307
Query: 150 RTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHITQKIITRNK 196
T E + LPE+ + AL+ + + R+K
Sbjct: 308 YTIEKALHEADKAIAELAILPESE------YKQALITLAHMAVNRSK 348
Score = 43 (20.2 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GN ++L GD + +R+ + L +++
Sbjct: 129 GNAASVLVGDFIYTRSFQMMTELGSMKIL 157
>UNIPROTKB|O66129 [details] [associations]
symbol:hexs-b "Hexaprenyl-diphosphate synthase large
subunit ((2E,6E)-farnesyl-diphosphate specific)" species:1270
"Micrococcus luteus" [GO:0000287 "magnesium ion binding"
evidence=IDA] [GO:0016765 "transferase activity, transferring alkyl
or aryl (other than methyl) groups" evidence=IDA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
GO:GO:0000287 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0016765
GO:GO:0009234 EMBL:AB003188 PDB:3AQB PDB:3AQC PDBsum:3AQB
PDBsum:3AQC GO:GO:0052923 ProteinModelPortal:O66129
BioCyc:MetaCyc:MONOMER-13829 ChEMBL:CHEMBL3128
EvolutionaryTrace:O66129 Uniprot:O66129
Length = 325
Score = 169 (64.5 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 45/130 (34%), Positives = 75/130 (57%)
Query: 29 VIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAF-EYGKNLGLAYQLIDDILDF 87
V Y+++ KTA L+ SC A LS Q +E +T ++G +G++YQ+IDDILD+
Sbjct: 158 VSFTAYLRRINRKTAILIEASCHLGA-LSSQLDEQSTYHIKQFGHCIGMSYQIIDDILDY 216
Query: 88 TGTSASLGKASLTDLRNGIITAPILFAM-----EEFPQLRAFIN---SSSDNPANVDVIL 139
T A+LGK +D+RNG IT P++ A+ ++ +L A + S+SD+ ++
Sbjct: 217 TSDEATLGKPVGSDIRNGHITYPLMAAIANLKEQDDDKLEAVVKHLTSTSDDEVYQYIVS 276
Query: 140 EYLGKSHGIQ 149
+ K +GI+
Sbjct: 277 QV--KQYGIE 284
Score = 35 (17.4 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 14 ISRALVALASLKHTEVIMECYMQK 37
+S LV +ASL H + I M++
Sbjct: 71 VSLELVHMASLVHDDYIDNSDMRR 94
>UNIPROTKB|Q3ACT5 [details] [associations]
symbol:hepT "Heptaprenyl diphosphate synthase component II"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 183 (69.5 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 21 LASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQL 80
L K+ ++ Y+ K KTA L+S SC+ ++ V +YG +G+A+Q+
Sbjct: 155 LNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQI 214
Query: 81 IDDILDFTGTSASLGKASLTDLRNGIITAPILFAM--EEFPQLRAFINSSSDNPANVDVI 138
IDDILDFT LGK +DLR G+IT P+L A+ ++ +L + + N AN++ I
Sbjct: 215 IDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDKKHELWRELQNLPQNNANIEQI 274
Query: 139 LE---YLG 143
++ YLG
Sbjct: 275 IKEIKYLG 282
>TIGR_CMR|CHY_1206 [details] [associations]
symbol:CHY_1206 "heptaprenyl diphosphate synthase
component II" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] [GO:0009234 "menaquinone biosynthetic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:CP000141 GenomeReviews:CP000141_GR
eggNOG:COG0142 HOGENOM:HOG000009104 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K00805 GO:GO:0009234
OMA:KLYRFGY RefSeq:YP_360049.1 ProteinModelPortal:Q3ACT5
STRING:Q3ACT5 GeneID:3727089 KEGG:chy:CHY_1206 PATRIC:21275548
BioCyc:CHYD246194:GJCN-1205-MONOMER Uniprot:Q3ACT5
Length = 326
Score = 183 (69.5 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 45/128 (35%), Positives = 71/128 (55%)
Query: 21 LASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQL 80
L K+ ++ Y+ K KTA L+S SC+ ++ V +YG +G+A+Q+
Sbjct: 155 LNGAKNISTSIKDYLIKIKRKTALLLSASCELGGVMANVSPRVVNALKQYGLYVGMAFQI 214
Query: 81 IDDILDFTGTSASLGKASLTDLRNGIITAPILFAM--EEFPQLRAFINSSSDNPANVDVI 138
IDDILDFT LGK +DLR G+IT P+L A+ ++ +L + + N AN++ I
Sbjct: 215 IDDILDFTADEKVLGKPVGSDLRQGLITLPVLLALKRDKKHELWRELQNLPQNNANIEQI 274
Query: 139 LE---YLG 143
++ YLG
Sbjct: 275 IKEIKYLG 282
>TIGR_CMR|CJE_0645 [details] [associations]
symbol:CJE_0645 "polyprenyl synthetase family protein"
species:195099 "Campylobacter jejuni RM1221" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_178660.1 ProteinModelPortal:Q5HVM5 STRING:Q5HVM5
GeneID:3232032 KEGG:cjr:CJE0645 PATRIC:20043010 OMA:DIQDESE
ProtClustDB:CLSK872307 BioCyc:CJEJ195099:GJC0-660-MONOMER
Uniprot:Q5HVM5
Length = 297
Score = 180 (68.4 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 44/123 (35%), Positives = 65/123 (52%)
Query: 1 MGNKLAILAGDLLISRALVALASLKHTE---VIMECYMQKTYNKTAALVSNSCKAVAYLS 57
M + A + D ++ A+ L + E + E Y++ YNKTA L+ S + A L+
Sbjct: 108 MDARFASIISDAVVKLAIGELMDVDLGEKFNINKEAYLKMIYNKTAVLIEASARCGAILA 167
Query: 58 GQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
G E+ A EYGKNLGLA+Q+IDDILD LGK ++ D + G T P ++ E
Sbjct: 168 GLYEK--DFA-EYGKNLGLAFQMIDDILDIKSDEKILGKPAMNDFKEGKTTLPYIYLYEN 224
Query: 118 FPQ 120
+
Sbjct: 225 LQE 227
>TIGR_CMR|SO_3653 [details] [associations]
symbol:SO_3653 "octaprenyl-diphosphate synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISS] [GO:0009234 "menaquinone
biosynthetic process" evidence=ISS] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 OMA:YITSAGG
RefSeq:NP_719195.2 ProteinModelPortal:Q8EB79 GeneID:1171312
KEGG:son:SO_3653 PATRIC:23526992 ProtClustDB:CLSK907271
Uniprot:Q8EB79
Length = 331
Score = 174 (66.3 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 56/197 (28%), Positives = 88/197 (44%)
Query: 5 LAILAG--DLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREE 62
L +LA ++L ++ L + + E YM+ Y KTA L + A L+G E
Sbjct: 140 LRVLADTTNVLAEGEVLQLMNCNDPDTTEESYMRVIYCKTAKLFEAATLLAAVLAGASPE 199
Query: 63 VATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM----EEF 118
T +YGK LG A+QL DD+LD+T S LGK DL G T P+++A+ EE
Sbjct: 200 QETALGDYGKYLGTAFQLTDDLLDYTADSDELGKNIGDDLAEGKPTLPLIYAIAHGTEEE 259
Query: 119 PQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDAT 178
QL D ++ I+ L + T + + LP++
Sbjct: 260 KQLIRQAIEQGDGTHAIEKIVAALHHCGALNYTQQKAIEESNKAIAALSVLPDS------ 313
Query: 179 NARTALVHITQKIITRN 195
+ +TAL+ + + + RN
Sbjct: 314 DFKTALISLAKISVDRN 330
>TIGR_CMR|CBU_0382 [details] [associations]
symbol:CBU_0382 "octylprenyl diphosphate synthase-like
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161 GO:GO:0004337
KO:K02523 HOGENOM:HOG000009102 OMA:SIKAMNV RefSeq:NP_819421.1
ProteinModelPortal:Q83EE2 GeneID:1208265 KEGG:cbu:CBU_0382
PATRIC:17929459 ProtClustDB:CLSK914032
BioCyc:CBUR227377:GJ7S-383-MONOMER Uniprot:Q83EE2
Length = 332
Score = 137 (53.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 41/155 (26%), Positives = 74/155 (47%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 93
Y + KTA L S + + A ++ + E +G +LG+AYQ+IDD+LD++ +++
Sbjct: 173 YYEVIRRKTAQLFSAAAEIGAIVATKNETWQKSMAAFGFHLGMAYQIIDDLLDYSKDASA 232
Query: 94 LGKASLTDLRNGIITAPILFAMEEFPQLRA-FINSSSDNPANVDV--ILEYLGKSHGIQR 150
L K DL G T P+++A ++ +A I + N D+ I++ + ++ +
Sbjct: 233 LDKNVGDDLAEGKATLPLIYAKQQAQPAQAEHIREAIKNGDLDDLQSIMKLMDETRAREY 292
Query: 151 TTEXXXXXXXXXXXXIDSLPETHDVDATNARTALV 185
T + + LP + DA NA T V
Sbjct: 293 TQQCALKQAEKAHTYLQQLPPSPYRDALNALTQFV 327
Score = 53 (23.7 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GN ++L GD L SRA LA + ++
Sbjct: 114 GNSASVLVGDFLYSRAFQILARRSNVPIM 142
>UNIPROTKB|O06428 [details] [associations]
symbol:grcC1 "Heptaprenyl diphosphate synthase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842573 HOGENOM:HOG000009104 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K00805 EMBL:CP003248 PIR:E70549
RefSeq:NP_215076.1 RefSeq:NP_334997.1 RefSeq:YP_006513895.1
SMR:O06428 EnsemblBacteria:EBMYCT00000001031
EnsemblBacteria:EBMYCT00000071419 GeneID:13318436 GeneID:887647
GeneID:924969 KEGG:mtc:MT0588 KEGG:mtu:Rv0562 KEGG:mtv:RVBD_0562
PATRIC:18122992 TubercuList:Rv0562 OMA:SIKAMNV
ProtClustDB:CLSK790596 Uniprot:O06428
Length = 335
Score = 168 (64.2 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 50/162 (30%), Positives = 73/162 (45%)
Query: 31 MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGT 90
+E Y++ KT +L+ + + SG +E G +G A+Q+ DDI+D
Sbjct: 172 IEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSE 231
Query: 91 SASLGKASLTDLRNGIITAPILFAMEEF-P---QLRAFINSSSDNPANVDVILEYLGKSH 146
S GK TD+R G+ T P+L+A+ E P +LRA +N D+ A V L L S
Sbjct: 232 SDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRALLNGPVDDDAEVREALTLLRASP 291
Query: 147 GIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTALVHIT 188
G+ R + + LP DV A ALV T
Sbjct: 292 GMARAKDVLAQYAAQARHELALLP---DVPGRRALAALVDYT 330
>TIGR_CMR|GSU_1317 [details] [associations]
symbol:GSU_1317 "octaprenyl-diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102 RefSeq:NP_952370.1
ProteinModelPortal:Q74DJ9 GeneID:2686096 KEGG:gsu:GSU1317
PATRIC:22025411 OMA:FNKPVLE ProtClustDB:CLSK828295
BioCyc:GSUL243231:GH27-1296-MONOMER Uniprot:Q74DJ9
Length = 322
Score = 167 (63.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 46/199 (23%), Positives = 89/199 (44%)
Query: 5 LAILAG--DLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREE 62
L +++G ++ ++ L E+ E Y++ +KTA L+S +C+A A L E
Sbjct: 130 LKVISGATTIIAEGEVLQLLCTSDLEMTQERYIEVVKSKTAVLLSAACEAGAILGTSSAE 189
Query: 63 VATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM-----EE 117
++G +LG+A+QL+DD LD+T + GK DL G IT P++ + EE
Sbjct: 190 QQEALRDFGMDLGIAFQLMDDTLDYTASEEQFGKEIGHDLEEGKITLPLIHTLMKCSDEE 249
Query: 118 FPQLRAFINSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDA 177
+ A + P + + + + K GI+ T + + ++ +
Sbjct: 250 RETIAAVVEKEILEPGDFESVFTLVHKYGGIEYTVSVANEYIARCKAHLGAFVDSQE--- 306
Query: 178 TNARTALVHITQKIITRNK 196
+ AL+ + ++ R +
Sbjct: 307 ---KAALIELADYVVNRKR 322
>TIGR_CMR|CPS_4513 [details] [associations]
symbol:CPS_4513 "octaprenyl-diphosphate synthase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
OMA:YITSAGG RefSeq:YP_271161.1 ProteinModelPortal:Q47VL1
STRING:Q47VL1 GeneID:3518869 KEGG:cps:CPS_4513 PATRIC:21471849
BioCyc:CPSY167879:GI48-4522-MONOMER Uniprot:Q47VL1
Length = 327
Score = 166 (63.5 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 48/183 (26%), Positives = 87/183 (47%)
Query: 9 AGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAF 68
A +++ ++ L + E YMQ Y KTA L + + A ++ Q ++
Sbjct: 142 ATNIVAEGEVLQLMNCNDASTTEESYMQVIYCKTAKLFEAATRLAAVIAKQDAKIEQAMA 201
Query: 69 EYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRA-FINS 127
+YGK LG A+QL+DDI+D+T + +GK DL G T P+L+AM+ + + I
Sbjct: 202 DYGKYLGTAFQLVDDIMDYTADAKEMGKNVGDDLAEGKPTLPLLYAMKHGNEAQQKLIKE 261
Query: 128 S---SDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHDVDATNARTAL 184
+ + N+++IL+ + ++ ++ T + I +L D + A +L
Sbjct: 262 AIELGNGMDNLELILQAMEETGSLRYTQKQAEIEADKA---IKALNVIADSEHKQALISL 318
Query: 185 VHI 187
HI
Sbjct: 319 AHI 321
>TIGR_CMR|ECH_0088 [details] [associations]
symbol:ECH_0088 "octaprenyl-diphosphate synthase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0016740 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 OMA:QQFPELH
KO:K02523 HOGENOM:HOG000009102 RefSeq:YP_506918.1
ProteinModelPortal:Q2GI15 STRING:Q2GI15 GeneID:3927493
KEGG:ech:ECH_0088 PATRIC:20575731 ProtClustDB:CLSK749549
BioCyc:ECHA205920:GJNR-88-MONOMER Uniprot:Q2GI15
Length = 325
Score = 164 (62.8 bits), Expect = 9.4e-12, P = 9.4e-12
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 3 NKLAILAG---DLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 59
N L+IL+ D+++ ++S + + E Y++ KTAAL S +C++ A L+
Sbjct: 136 NILSILSQASKDVIVGEVQQMISS-HNINISKEKYIEIISAKTAALFSATCESAANLAQT 194
Query: 60 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 119
E +G N G+++Q++DDILD+T + GK DL G T P++ A +
Sbjct: 195 SNEEKEALKNFGNNFGISFQIMDDILDYTASGEQFGKKLGNDLLTGKTTLPVIIAYQNAT 254
Query: 120 QL-RAFINSSSDNPANVDVILEYLGKSHGIQRT 151
+ F + S NP N++ + Y+ + I+++
Sbjct: 255 SKEKKFWDQISVNP-NLEQAISYIKVHNAIEKS 286
>UNIPROTKB|P0AD57 [details] [associations]
symbol:ispB "IspB" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016094
"polyprenol biosynthetic process" evidence=IMP] [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0016094 GO:GO:0004659 KO:K02523 EMBL:D13267 EMBL:X68873
PIR:E65109 RefSeq:NP_417654.1 RefSeq:YP_491372.1
ProteinModelPortal:P0AD57 SMR:P0AD57 IntAct:P0AD57 PRIDE:P0AD57
EnsemblBacteria:EBESCT00000004959 EnsemblBacteria:EBESCT00000017333
GeneID:12932117 GeneID:947364 KEGG:ecj:Y75_p3107 KEGG:eco:b3187
PATRIC:32121794 EchoBASE:EB0017 EcoGene:EG10017
HOGENOM:HOG000009102 OMA:YITSAGG ProtClustDB:PRK10888
BioCyc:EcoCyc:OPPSYN-MONOMER BioCyc:ECOL316407:JW3154-MONOMER
BioCyc:MetaCyc:OPPSYN-MONOMER Genevestigator:P0AD57 Uniprot:P0AD57
Length = 323
Score = 160 (61.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 45/168 (26%), Positives = 79/168 (47%)
Query: 9 AGDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAF 68
A +++ ++ L ++ ++ E YM+ Y+KTA L + + L+G E
Sbjct: 138 AVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQ 197
Query: 69 EYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE-FPQLRAFINS 127
+YG+ LG A+QLIDD+LD+ LGK DL G T P+L AM P+ I +
Sbjct: 198 DYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRT 257
Query: 128 SSD--NPANV-DVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPET 172
+ + N ++ + +LE + ++ T + + LP+T
Sbjct: 258 AIEQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEADKAIAALQVLPDT 305
>UNIPROTKB|Q3AAM7 [details] [associations]
symbol:CHY_1988 "Geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 154 (59.3 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 4 KLAILAG-DLLISRALVALASL---KHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 59
+LA+ +G + LI+ +V L+S K EV++ ++ NKTA L+ S A L+G
Sbjct: 144 ELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHL----NKTARLIRYSLIAGGILAGA 199
Query: 60 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
EE +YG++LGLA+Q++DD+LD G +GK +D +N +T LF +EE
Sbjct: 200 TEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEE 257
>TIGR_CMR|CHY_1988 [details] [associations]
symbol:CHY_1988 "geranyltranstransferase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000141
GenomeReviews:CP000141_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K13789 OMA:NITEECI RefSeq:YP_360807.1
ProteinModelPortal:Q3AAM7 STRING:Q3AAM7 GeneID:3727552
KEGG:chy:CHY_1988 PATRIC:21277063
BioCyc:CHYD246194:GJCN-1987-MONOMER Uniprot:Q3AAM7
Length = 295
Score = 154 (59.3 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 4 KLAILAG-DLLISRALVALASL---KHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 59
+LA+ +G + LI+ +V L+S K EV++ ++ NKTA L+ S A L+G
Sbjct: 144 ELAVASGSEGLIAGQVVDLSSSEAKKDPEVLLYIHL----NKTARLIRYSLIAGGILAGA 199
Query: 60 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
EE +YG++LGLA+Q++DD+LD G +GK +D +N +T LF +EE
Sbjct: 200 TEEEIKALDDYGRHLGLAFQIVDDLLDVVGDFQKIGKPVGSDEKNQKLTYVSLFGIEE 257
>UNIPROTKB|Q3IPL1 [details] [associations]
symbol:idsA3 "Geranylfarnesyl diphosphate synthase"
species:348780 "Natronomonas pharaonis DSM 2160" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 HOGENOM:HOG000009101 KO:K13787 GO:GO:0044687
EMBL:CR936257 RefSeq:YP_327492.1 ProteinModelPortal:Q3IPL1
STRING:Q3IPL1 PRIDE:Q3IPL1 GeneID:3702862 GenomeReviews:CR936257_GR
KEGG:nph:NP3696A OMA:DIMDNDD ProtClustDB:CLSK511327
BioCyc:NPHA348780:GJX0-1875-MONOMER Uniprot:Q3IPL1
Length = 341
Score = 135 (52.6 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 27 TEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 86
++V E Y++ KTA L + + A L G +E YG ++G A+Q+ DD+LD
Sbjct: 179 SDVTTEEYLEMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLD 238
Query: 87 FTGTSASLGKASLTDLRNGIITAPILFAMEEFPQLRAFINSSSDNPANVDVILEYLGKSH 146
T S LGK +DL T L A ++ + + S + A ++ ++ L +
Sbjct: 239 LTAPSDELGKQRGSDLVENKRTVITLHARDQGIDVEGLV-SDDPSDAEIEAAVQTLEDAG 297
Query: 147 GIQRTTEXXXXXXXXXXXXIDSLPE 171
I E +D LPE
Sbjct: 298 SIDFAREMALDLVTSGKERLDVLPE 322
Score = 40 (19.1 bits), Expect = 9.5e-11, Sum P(2) = 9.5e-11
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 6 AILAGDLLISRA 17
AILAGD L S+A
Sbjct: 126 AILAGDTLYSKA 137
>UNIPROTKB|Q5LX97 [details] [associations]
symbol:ddsA "Decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MGNKLAILA-GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 59
+ N A +A G++L + A + L+ E + Y+Q KTAAL S + + ++G
Sbjct: 143 LANAAATIAEGEVL---QMTAASDLRTDESV---YLQVVRGKTAALFSAATEVGGVIAGV 196
Query: 60 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 119
E FEYG LG+A+Q+ DD+LD+ G + + GK D R +T P++ A+ +
Sbjct: 197 PEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAVAQAT 256
Query: 120 -QLRAF----INSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHD 174
+ RAF I +++ L + K + T ++ LP H+
Sbjct: 257 DEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTALELLPN-HE 315
Query: 175 VDATNARTALVHITQKIITR 194
+ RT L + ++ R
Sbjct: 316 I-----RTMLSDLADYVVAR 330
>TIGR_CMR|SPO_0319 [details] [associations]
symbol:SPO_0319 "decaprenyl diphosphate synthase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] [GO:0008834
"di-trans,poly-cis-decaprenylcistransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0008834 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_165582.1 ProteinModelPortal:Q5LX97 GeneID:3194982
KEGG:sil:SPO0319 PATRIC:23373893 OMA:NDIRIIT ProtClustDB:CLSK933222
Uniprot:Q5LX97
Length = 332
Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/200 (26%), Positives = 90/200 (45%)
Query: 1 MGNKLAILA-GDLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQ 59
+ N A +A G++L + A + L+ E + Y+Q KTAAL S + + ++G
Sbjct: 143 LANAAATIAEGEVL---QMTAASDLRTDESV---YLQVVRGKTAALFSAATEVGGVIAGV 196
Query: 60 REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFP 119
E FEYG LG+A+Q+ DD+LD+ G + + GK D R +T P++ A+ +
Sbjct: 197 PEAQVRALFEYGDALGIAFQIADDLLDYQGDAKATGKNVGDDFRERKLTLPVIKAVAQAT 256
Query: 120 -QLRAF----INSSSDNPANVDVILEYLGKSHGIQRTTEXXXXXXXXXXXXIDSLPETHD 174
+ RAF I +++ L + K + T ++ LP H+
Sbjct: 257 DEERAFWVRTIEKGKQAEGDLEQALALMEKYGTLAATRADAHAWAEKARTALELLPN-HE 315
Query: 175 VDATNARTALVHITQKIITR 194
+ RT L + ++ R
Sbjct: 316 I-----RTMLSDLADYVVAR 330
>UNIPROTKB|P0A5H8 [details] [associations]
symbol:MT3506 "(2E,6E)-farnesyl diphosphate synthase"
species:1773 "Mycobacterium tuberculosis" [GO:0000287 "magnesium
ion binding" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005506
"iron ion binding" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0033384 "geranyl diphosphate
biosynthetic process" evidence=IDA] [GO:0033386 "geranylgeranyl
diphosphate biosynthetic process" evidence=IDA] [GO:0040007
"growth" evidence=IMP] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00766 GO:GO:0005737
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0005506 GO:GO:0016126
GO:GO:0030145 EMBL:BX842582 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 PIR:C70735 RefSeq:NP_338029.1
RefSeq:YP_006516883.1 RefSeq:YP_177970.1 ProteinModelPortal:P0A5H8
SMR:P0A5H8 EnsemblBacteria:EBMYCT00000003545
EnsemblBacteria:EBMYCT00000069473 GeneID:13317001 GeneID:887919
GeneID:926589 KEGG:mtc:MT3506 KEGG:mtu:Rv3398c KEGG:mtv:RVBD_3398c
PATRIC:18129451 TubercuList:Rv3398c HOGENOM:HOG000009101 KO:K13787
OMA:RMAPLES ProtClustDB:CLSK799990 BioCyc:MetaCyc:MONOMER-15280
GO:GO:0004161 GO:GO:0004337 GO:GO:0045337 GO:GO:0033384
GO:GO:0033386 Uniprot:P0A5H8
Length = 359
Score = 134 (52.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 27 TEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 86
T+V ++ ++ KTAAL++ S + A L+G V YG+++GLA+QL+DD+L
Sbjct: 187 TDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDDLLG 246
Query: 87 FTGTSASLGKASLTDLRNGIITAPILFAM 115
G GK +DLR+ T P+ + +
Sbjct: 247 IWGRPEITGKPVYSDLRSRKKTLPVTWTV 275
Score = 46 (21.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVIMEC 33
G+ +A+LAGD A+ SL H EV+++C
Sbjct: 132 GDAMALLAGD--------AMLSLAH-EVLLDC 154
>TIGR_CMR|APH_1247 [details] [associations]
symbol:APH_1247 "octaprenyl-diphosphate synthase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006744
"ubiquinone biosynthetic process" evidence=ISS] [GO:0009234
"menaquinone biosynthetic process" evidence=ISS] [GO:0016765
"transferase activity, transferring alkyl or aryl (other than
methyl) groups" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
ProtClustDB:CLSK749549 RefSeq:YP_505772.1 ProteinModelPortal:Q2GIM9
STRING:Q2GIM9 GeneID:3930831 KEGG:aph:APH_1247 PATRIC:20951282
OMA:MIPEISN BioCyc:APHA212042:GHPM-1251-MONOMER Uniprot:Q2GIM9
Length = 316
Score = 149 (57.5 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 38/154 (24%), Positives = 76/154 (49%)
Query: 5 LAILAG--DLLISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREE 62
L++L+ +++S + L ++ Y++ +KTA L S +C++ A L
Sbjct: 127 LSVLSNTASIIVSGEMQQLVHSSSLDISRTKYLEIISSKTAVLFSAACESAAVLHDVGTL 186
Query: 63 VATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEEFPQ-- 120
++G N G+ +Q++DDILD+T LGK + D+ +G +T P++ A E +
Sbjct: 187 QRNALRDWGFNFGIVFQILDDILDYTANQNELGKRTYNDIVSGKVTLPLIIAYEGASEKD 246
Query: 121 ---LRAFINSSSDNPANVDVILEYLGKSHGIQRT 151
LR ++ +P D+ Y+ + I+++
Sbjct: 247 RIGLRGALSRERPDP---DLAFSYIMAQNAIEKS 277
>UNIPROTKB|Q74CA9 [details] [associations]
symbol:GSU1765 "Trans-isoprenyl diphosphate synthase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789
RefSeq:NP_952815.1 ProteinModelPortal:Q74CA9 GeneID:2685235
KEGG:gsu:GSU1765 PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 148 (57.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 3 NKLAILAGDL-LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQRE 61
+++A+ AG ++ +V + S + E+ + KT AL+ S KA A L G
Sbjct: 144 HEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANA 203
Query: 62 EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
+ YG+ +GLA+Q+ DDILD GT+ +GK + +D G T P + + E
Sbjct: 204 DAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAE 259
>TIGR_CMR|GSU_1765 [details] [associations]
symbol:GSU_1765 "geranyltranstransferase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 KO:K13789 RefSeq:NP_952815.1
ProteinModelPortal:Q74CA9 GeneID:2685235 KEGG:gsu:GSU1765
PATRIC:22026373 OMA:RRGNPTN ProtClustDB:CLSK828537
BioCyc:GSUL243231:GH27-1760-MONOMER Uniprot:Q74CA9
Length = 297
Score = 148 (57.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 3 NKLAILAGDL-LISRALVALASLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQRE 61
+++A+ AG ++ +V + S + E+ + KT AL+ S KA A L G
Sbjct: 144 HEIALCAGSRGMVGGQVVDMESEGNKEIDLATVQYIHTRKTGALIKASIKAGAVLGGANA 203
Query: 62 EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
+ YG+ +GLA+Q+ DDILD GT+ +GK + +D G T P + + E
Sbjct: 204 DAVKAVTRYGEAIGLAFQIADDILDIEGTTEQIGKDAGSDEARGKATYPAVLGLAE 259
>TIGR_CMR|NSE_0238 [details] [associations]
symbol:NSE_0238 "polyprenyl synthetase family protein"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0004659
"prenyltransferase activity" evidence=ISS] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 KO:K02523 HOGENOM:HOG000009102
RefSeq:YP_506132.1 ProteinModelPortal:Q2GEG4 STRING:Q2GEG4
GeneID:3932073 KEGG:nse:NSE_0238 PATRIC:22680571 OMA:MIYYKTA
ProtClustDB:CLSK2527623 BioCyc:NSEN222891:GHFU-268-MONOMER
Uniprot:Q2GEG4
Length = 321
Score = 124 (48.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 28 EVIMEC-YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILD 86
E++ E Y++ KTA L S + + A L+G++E V L E G +G+A+Q+ DD+LD
Sbjct: 157 EIVSESEYLEVIARKTAVLFSAAAEIAAILTGKQEYVVILR-EIGFLIGMAFQITDDVLD 215
Query: 87 FTGTSASLGKASLTDLRNGIITAPILFAMEE 117
+ G +GK+ D R T P + A +
Sbjct: 216 Y-GEPQEVGKSVGNDFRECKFTLPCVIAYRD 245
Score = 61 (26.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVIM 31
GNK+++L GD L+S A + K+ V++
Sbjct: 106 GNKISVLTGDFLLSVAFEIILECKNLSVVL 135
>FB|FBgn0037044 [details] [associations]
symbol:CG10585 species:7227 "Drosophila melanogaster"
[GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=ISS] EMBL:AE014296 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 eggNOG:COG0142 GeneTree:ENSGT00530000063378
GO:GO:0000010 InterPro:IPR017446 PANTHER:PTHR12001 KO:K12505
EMBL:AY051597 RefSeq:NP_649277.1 UniGene:Dm.1022 SMR:Q9VP87
MINT:MINT-762100 EnsemblMetazoa:FBtr0078287 GeneID:40323
KEGG:dme:Dmel_CG10585 UCSC:CG10585-RA FlyBase:FBgn0037044
InParanoid:Q9VP87 OMA:IILAMQD OrthoDB:EOG4CFXQJ GenomeRNAi:40323
NextBio:818180 Uniprot:Q9VP87
Length = 448
Score = 119 (46.9 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 39/146 (26%), Positives = 67/146 (45%)
Query: 44 ALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLTDLR 103
+L+ SC+A L+GQ EE+ A+ +GK+L LA+Q D F L D+
Sbjct: 308 SLLGKSCQASLKLAGQSEELQRHAYRFGKHLALAWQACLDAEPFQCPQLPL------DVT 361
Query: 104 NGIITAPILFAMEEFPQLRAFINSSSDNPANVDV--ILEYLGKSHGIQRTTEXXXXXXXX 161
+++AP+LF +E P + + + + + N+D I + + + +T E
Sbjct: 362 FSLVSAPVLFHLEHDPGMYSQLEAGKQSVDNIDYDKIHKAILAGPALAKTKELQRKHTAA 421
Query: 162 XXXXIDSLPETHDVDATNARTALVHI 187
+ P AT+AR AL +I
Sbjct: 422 ALAVLQHFP------ATDARQALENI 441
Score = 67 (28.6 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+ +L GD L+ + LA+L++ EV+
Sbjct: 204 GNKIGLLTGDYLLGHSSAELANLRNQEVV 232
>TAIR|locus:2093832 [details] [associations]
symbol:AT3G29430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AP001309 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:DQ056612 IPI:IPI00540813
RefSeq:NP_189589.1 UniGene:At.53571 ProteinModelPortal:Q9LIA0
SMR:Q9LIA0 STRING:Q9LIA0 EnsemblPlants:AT3G29430.1 GeneID:822604
KEGG:ath:AT3G29430 TAIR:At3g29430 InParanoid:Q9LIA0 OMA:NDRNSAF
PhylomeDB:Q9LIA0 Genevestigator:Q9LIA0 Uniprot:Q9LIA0
Length = 357
Score = 122 (48.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 40 NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 99
+KTAAL+ + A + G EE +Y + +GL +Q++DDILD T ++ LGK +
Sbjct: 241 HKTAALLEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAG 300
Query: 100 TDLRNGIITAPILFAME 116
D+ G +T P L +E
Sbjct: 301 KDVMAGKLTYPRLIGLE 317
Score = 42 (19.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 2 GNKLAILAGDLLISRA 17
G +A+LAGD L++ A
Sbjct: 164 GEDMAVLAGDALLALA 179
>UNIPROTKB|I3LGK0 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0050347
Ensembl:ENSSSCT00000024393 OMA:DIVELMS Uniprot:I3LGK0
Length = 241
Score = 93 (37.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/89 (26%), Positives = 48/89 (53%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
++ + + ++T+ AL++ SC+A L+ EV +AF+YGK++ +++++ D+ F
Sbjct: 144 DIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLQPF 203
Query: 88 TGTSASLGKASLTDLRNGIITAPILFAME 116
S SLT N +AP++ E
Sbjct: 204 IKEKTS---DSLTFNLN---SAPVVLHQE 226
Score = 76 (31.8 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+AIL+GD L++ A LA L++T+V+
Sbjct: 86 GNKIAILSGDFLLANACNGLALLQNTKVV 114
>UNIPROTKB|Q81M53 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:1392
"Bacillus anthracis" [GO:0045337 "farnesyl diphosphate biosynthetic
process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 93
Y+ K +KT L+ + A + LS EE E+ K +GLA+Q+ DDILD GT
Sbjct: 177 YIHK--HKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEE 234
Query: 94 LGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSSSDNPANVDVILEYL 142
+GK +D+ N T LF ++ L I + D ++ + EYL
Sbjct: 235 IGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEYL 284
Score = 45 (20.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVIME 32
G +A+LAGD L++ A + + E+ E
Sbjct: 107 GEAMAVLAGDGLLTYAFQVIMAYGQKEISAE 137
>TIGR_CMR|BA_4402 [details] [associations]
symbol:BA_4402 "geranyltranstransferase" species:198094
"Bacillus anthracis str. Ames" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337 KO:K13789
RefSeq:NP_846630.1 RefSeq:YP_021045.1 RefSeq:YP_030332.1
ProteinModelPortal:Q81M53 DNASU:1087728
EnsemblBacteria:EBBACT00000008555 EnsemblBacteria:EBBACT00000017694
EnsemblBacteria:EBBACT00000019296 GeneID:1087728 GeneID:2819990
GeneID:2851738 KEGG:ban:BA_4402 KEGG:bar:GBAA_4402 KEGG:bat:BAS4082
OMA:FACAVEM ProtClustDB:CLSK917292
BioCyc:BANT260799:GJAJ-4139-MONOMER
BioCyc:BANT261594:GJ7F-4282-MONOMER Uniprot:Q81M53
Length = 296
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 93
Y+ K +KT L+ + A + LS EE E+ K +GLA+Q+ DDILD GT
Sbjct: 177 YIHK--HKTGKLLEFAVLAGSILSDATEEQEEKLLEFAKYIGLAFQIRDDILDVEGTEEE 234
Query: 94 LGKASLTDLRNGIITAPILFAMEEFPQ-LRAFINSSSDNPANVDVILEYL 142
+GK +D+ N T LF ++ L I + D ++ + EYL
Sbjct: 235 IGKPIGSDVSNEKSTYTTLFTVDRAKDILDETIAKAKDAIGSLQLQDEYL 284
Score = 45 (20.9 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVIME 32
G +A+LAGD L++ A + + E+ E
Sbjct: 107 GEAMAVLAGDGLLTYAFQVIMAYGQKEISAE 137
>UNIPROTKB|A6QR05 [details] [associations]
symbol:PDSS2 "PDSS2 protein" species:9913 "Bos taurus"
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290 GO:GO:0050878
eggNOG:COG0142 GeneTree:ENSGT00530000063378 GO:GO:0000010
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE
OrthoDB:EOG44QT18 GO:GO:0050347 EMBL:DAAA02025951 EMBL:DAAA02025952
EMBL:DAAA02025953 EMBL:DAAA02025954 EMBL:BC150063 IPI:IPI00704753
RefSeq:NP_001093855.1 UniGene:Bt.18477 STRING:A6QR05
Ensembl:ENSBTAT00000029142 GeneID:521115 KEGG:bta:521115
InParanoid:A6QR05 NextBio:20873244 Uniprot:A6QR05
Length = 395
Score = 97 (39.2 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
++ + + ++T+ AL++ SC+A L+ EV +AF+YGK++ +++++ D+L F
Sbjct: 237 DIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQDMAFQYGKHMAMSHKINSDLLPF 296
Score = 76 (31.8 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+AIL+GD L++ A LA L++T+V+
Sbjct: 179 GNKIAILSGDFLLANACNGLALLQNTKVV 207
>UNIPROTKB|F1NMS4 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000010 "trans-hexaprenyltranstransferase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 GO:GO:0005739 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0051290
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 OMA:QIGEAQE GO:GO:0050347
EMBL:AADN02002114 EMBL:AADN02002115 EMBL:AADN02002116
EMBL:AADN02002117 EMBL:AADN02002118 IPI:IPI00590994
Ensembl:ENSGALT00000024716 Uniprot:F1NMS4
Length = 359
Score = 91 (37.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
++ + + ++ + +AL++ SC+A L+ E+ +AF YGK++ ++++L D+ F
Sbjct: 201 DIGISTWKEQVFLSHSALLAKSCQAAMELAKHSAEMQDMAFRYGKHMSMSHKLHSDLQPF 260
Query: 88 TGTSAS 93
S+S
Sbjct: 261 VKESSS 266
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+A+L+GD L++ A +LA L++T+V+
Sbjct: 144 GNKMAVLSGDFLLANACTSLAQLQNTKVV 172
>TAIR|locus:2079028 [details] [associations]
symbol:AT3G32040 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 ProtClustDB:CLSN2682670 EMBL:AP002033 EMBL:BT015110
EMBL:AK221451 IPI:IPI00544436 RefSeq:NP_189747.1 UniGene:At.50761
ProteinModelPortal:Q9LHR4 SMR:Q9LHR4 STRING:Q9LHR4 PRIDE:Q9LHR4
EnsemblPlants:AT3G32040.1 GeneID:822957 KEGG:ath:AT3G32040
TAIR:At3g32040 InParanoid:Q9LHR4 PhylomeDB:Q9LHR4
Genevestigator:Q9LHR4 Uniprot:Q9LHR4
Length = 360
Score = 118 (46.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 27/77 (35%), Positives = 44/77 (57%)
Query: 40 NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 99
+KTAAL+ + A + G EE +YG+ +GL +Q++DDI+D T ++ LGK +
Sbjct: 244 HKTAALLEAAAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAG 303
Query: 100 TDLRNGIITAPILFAME 116
D+ +T P L +E
Sbjct: 304 KDVMARKLTYPRLIGLE 320
Score = 43 (20.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
G +A+LAGD AL+ALA +H V+
Sbjct: 167 GEHMAVLAGD-----ALLALA-FEHMTVV 189
>UNIPROTKB|Q9UWR6 [details] [associations]
symbol:fgs "Geranylfarnesyl diphosphate synthase"
species:56636 "Aeropyrum pernix" [GO:0004659 "prenyltransferase
activity" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004659 EMBL:AB025791
ProteinModelPortal:Q9UWR6 BioCyc:MetaCyc:MONOMER-15678
BRENDA:2.5.1.B1 GO:GO:0044687 Uniprot:Q9UWR6
Length = 318
Score = 119 (46.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSAS 93
Y+ KT AL+ + + A +G E+ + E G N G+A+Q+ DDIL G
Sbjct: 159 YLNMVRLKTGALIEAAARIGAVAAGAGSEIEKMMGEVGMNAGIAFQIRDDILGVIGDPKV 218
Query: 94 LGKASLTDLRNGIITAPILFAMEE 117
GK DLR G T +++A+++
Sbjct: 219 TGKPVYNDLRRGKKTLLVIYAVKK 242
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 2 GNKLAILAGDLLISRALVALA 22
G+ AILAGD L + A +A
Sbjct: 92 GDDWAILAGDTLHAAAFKMIA 112
>RGD|1359372 [details] [associations]
symbol:Pdss2 "prenyl (decaprenyl) diphosphate synthase, subunit
2" species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006744 "ubiquinone biosynthetic process"
evidence=IEA;ISO] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=IEA;ISO] [GO:0050347 "trans-octaprenyltranstransferase
activity" evidence=IEA;ISO] [GO:0050878 "regulation of body fluid
levels" evidence=IEA;ISO] [GO:0051290 "protein
heterotetramerization" evidence=IEA;ISO] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
RGD:1359372 GO:GO:0005739 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0006744 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
HOGENOM:HOG000294216 HOVERGEN:HBG058860 KO:K12505 OrthoDB:EOG44QT18
EMBL:BC085898 IPI:IPI00367901 RefSeq:NP_001014271.1
UniGene:Rn.20063 ProteinModelPortal:Q5U2R1 PRIDE:Q5U2R1
GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372 NextBio:687727
ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1 Uniprot:Q5U2R1
Length = 401
Score = 95 (38.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
++ + + ++T+ AL++ SCKA L+ V +AF+YGK++ +++++ D+ F
Sbjct: 243 DIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPF 302
Query: 88 TGTSASLGK 96
AS K
Sbjct: 303 IKDKASDSK 311
Score = 75 (31.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+A+L+GD L++ A LA L++T+V+
Sbjct: 185 GNKIAVLSGDFLLANACNGLALLQNTKVV 213
>UNIPROTKB|Q5U2R1 [details] [associations]
symbol:Pdss2 "Decaprenyl-diphosphate synthase subunit 2"
species:10116 "Rattus norvegicus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IEA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0050347 "trans-octaprenyltranstransferase activity"
evidence=IEA] [GO:0050878 "regulation of body fluid levels"
evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00232 RGD:1359372 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0006744 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216 HOVERGEN:HBG058860
KO:K12505 OrthoDB:EOG44QT18 EMBL:BC085898 IPI:IPI00367901
RefSeq:NP_001014271.1 UniGene:Rn.20063 ProteinModelPortal:Q5U2R1
PRIDE:Q5U2R1 GeneID:365592 KEGG:rno:365592 UCSC:RGD:1359372
NextBio:687727 ArrayExpress:Q5U2R1 Genevestigator:Q5U2R1
Uniprot:Q5U2R1
Length = 401
Score = 95 (38.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
++ + + ++T+ AL++ SCKA L+ V +AF+YGK++ +++++ D+ F
Sbjct: 243 DIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPF 302
Query: 88 TGTSASLGK 96
AS K
Sbjct: 303 IKDKASDSK 311
Score = 75 (31.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+A+L+GD L++ A LA L++T+V+
Sbjct: 185 GNKIAVLSGDFLLANACNGLALLQNTKVV 213
>UNIPROTKB|Q86YH6 [details] [associations]
symbol:PDSS2 "Decaprenyl-diphosphate synthase subunit 2"
species:9606 "Homo sapiens" [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IEA]
[GO:0050878 "regulation of body fluid levels" evidence=IEA]
[GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=IEA;IDA] [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0008299 "isoprenoid biosynthetic process" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00232
GO:GO:0005739 GO:GO:0005737 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0006744 GO:GO:0046982 Orphanet:139485
GO:GO:0051290 GO:GO:0050878 Orphanet:255249 eggNOG:COG0142
GO:GO:0000010 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
EMBL:AB210839 EMBL:AF254956 EMBL:AL121957 EMBL:AL590489
EMBL:AL355586 EMBL:AL591516 EMBL:BC029491 EMBL:BC039906
IPI:IPI00384708 IPI:IPI00643460 RefSeq:NP_065114.3
UniGene:Hs.486095 ProteinModelPortal:Q86YH6 SMR:Q86YH6
STRING:Q86YH6 PhosphoSite:Q86YH6 DMDM:73620006 PaxDb:Q86YH6
PRIDE:Q86YH6 Ensembl:ENST00000369031 Ensembl:ENST00000369037
GeneID:57107 KEGG:hsa:57107 UCSC:uc003prt.2 UCSC:uc003prv.3
CTD:57107 GeneCards:GC06M107473 HGNC:HGNC:23041 HPA:HPA029685
HPA:HPA029686 MIM:610564 MIM:614652 neXtProt:NX_Q86YH6
PharmGKB:PA134957167 HOGENOM:HOG000294216 HOVERGEN:HBG058860
InParanoid:Q86YH6 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
PhylomeDB:Q86YH6 BioCyc:MetaCyc:HS15203-MONOMER GenomeRNAi:57107
NextBio:62953 ArrayExpress:Q86YH6 Bgee:Q86YH6 CleanEx:HS_PDSS2
Genevestigator:Q86YH6 GermOnline:ENSG00000164494 GO:GO:0050347
Uniprot:Q86YH6
Length = 399
Score = 93 (37.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 16/60 (26%), Positives = 37/60 (61%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
++ + + ++T+ AL++ SC+A L+ EV +AF+YGK++ +++++ D+ F
Sbjct: 241 DIGISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPF 300
Score = 76 (31.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+AIL+GD L++ A LA L++T+V+
Sbjct: 184 GNKIAILSGDFLLANACNGLALLQNTKVV 212
>UNIPROTKB|P22939 [details] [associations]
symbol:ispA "geranyl diphosphate synthase / farnesyl
diphosphate synthase" species:83333 "Escherichia coli K-12"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0033384 "geranyl
diphosphate biosynthetic process" evidence=IMP] [GO:0004337
"geranyltranstransferase activity" evidence=IEA;IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=IMP] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 GO:GO:0005737 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U82664 eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 EMBL:D00694 PIR:JQ0665 RefSeq:NP_414955.1
RefSeq:YP_488713.1 PDB:1RQI PDB:1RQJ PDBsum:1RQI PDBsum:1RQJ
ProteinModelPortal:P22939 SMR:P22939 DIP:DIP-10044N IntAct:P22939
MINT:MINT-1233182 SWISS-2DPAGE:P22939 PRIDE:P22939
EnsemblBacteria:EBESCT00000002132 EnsemblBacteria:EBESCT00000015988
GeneID:12930843 GeneID:945064 KEGG:ecj:Y75_p0409 KEGG:eco:b0421
PATRIC:32115991 EchoBASE:EB0503 EcoGene:EG10508 KO:K00795
OMA:NITEECI ProtClustDB:PRK10581 BioCyc:EcoCyc:FPPSYN-MONOMER
BioCyc:ECOL316407:JW0411-MONOMER BioCyc:MetaCyc:FPPSYN-MONOMER
BRENDA:2.5.1.1 SABIO-RK:P22939 ChEMBL:CHEMBL1075078
EvolutionaryTrace:P22939 Genevestigator:P22939 Uniprot:P22939
Length = 299
Score = 117 (46.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 40 NKTAALVSNSCKAVAYLSGQREEVATLAFE-YGKNLGLAYQLIDDILDFTGTSASLGKAS 98
+KT AL+ + + A +G + A + Y +++GLA+Q+ DDILD G +A+LGK
Sbjct: 180 HKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQ 239
Query: 99 LTDLRNGIITAPILFAMEE 117
D + G T P L +E+
Sbjct: 240 GADQQLGKSTYPALLGLEQ 258
Score = 39 (18.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEV 29
G AILAGD L + A L+ EV
Sbjct: 106 GEANAILAGDALQTLAFSILSDADMPEV 133
>ZFIN|ZDB-GENE-040718-43 [details] [associations]
symbol:pdss2 "prenyl (decaprenyl) diphosphate
synthase, subunit 2" species:7955 "Danio rerio" [GO:0008299
"isoprenoid biosynthetic process" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000092 Pfam:PF00348
ZFIN:ZDB-GENE-040718-43 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
CTD:57107 HOVERGEN:HBG058860 KO:K12505 EMBL:BC075908
IPI:IPI00489656 RefSeq:NP_001002351.1 UniGene:Dr.88524
ProteinModelPortal:Q6DHQ9 STRING:Q6DHQ9 PRIDE:Q6DHQ9 GeneID:436624
KEGG:dre:436624 InParanoid:Q6DHQ9 NextBio:20831069 Bgee:Q6DHQ9
Uniprot:Q6DHQ9
Length = 370
Score = 89 (36.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 23 SLKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLID 82
S + + + + + + AL++ SC+A L+ E LAF+YGK+L L ++L
Sbjct: 208 SAEEDSLTVASWEDQAFLSHGALLAKSCQAAMKLARHNTEAQNLAFQYGKHLALGHKLNS 267
Query: 83 DILDFTGTSASLGKASLTDLRNGIITAPILF 113
++ F S S G D +AP++F
Sbjct: 268 ELQPFV-KSGSEGAVFHLD------SAPVVF 291
Score = 77 (32.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+A+L+GD L++ A LA L T+V+
Sbjct: 159 GNKMAVLSGDFLLANACTGLAQLNDTKVV 187
>TAIR|locus:2046283 [details] [associations]
symbol:AT2G18620 species:3702 "Arabidopsis thaliana"
[GO:0008299 "isoprenoid biosynthetic process" evidence=IEA]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 GO:GO:0016117 EMBL:AC006135 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:DQ446520
EMBL:DQ652999 IPI:IPI00544740 PIR:E84566 RefSeq:NP_179452.1
UniGene:At.52813 ProteinModelPortal:Q9ZU77 SMR:Q9ZU77 STRING:Q9ZU77
EnsemblPlants:AT2G18620.1 GeneID:816377 KEGG:ath:AT2G18620
TAIR:At2g18620 InParanoid:Q9ZU77 OMA:YMIGKAN PhylomeDB:Q9ZU77
Genevestigator:Q9ZU77 Uniprot:Q9ZU77
Length = 347
Score = 109 (43.4 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 32/107 (29%), Positives = 54/107 (50%)
Query: 13 LISRALVALAS--LKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEY 70
L++ +V L S + +V +E +KTA L+ + A + G +E +
Sbjct: 202 LVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRF 261
Query: 71 GKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
+ +GL +Q++DDILD T +S LGK + DL +T P L +E+
Sbjct: 262 ARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEK 308
Score = 50 (22.7 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 2 GNKLAILAGDLLISRALVALAS 23
G +A+LAGD LIS A LA+
Sbjct: 156 GEDVAVLAGDALISFAFEHLAT 177
>UNIPROTKB|P80042 [details] [associations]
symbol:GGPS1 "Geranylgeranyl pyrophosphate synthase,
chloroplastic" species:4072 "Capsicum annuum" [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0004311
"farnesyltranstransferase activity" evidence=IDA] [GO:0004337
"geranyltranstransferase activity" evidence=IDA] [GO:0006720
"isoprenoid metabolic process" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386
GO:GO:0006720 EMBL:X80267 PIR:S53722 ProteinModelPortal:P80042
SMR:P80042 BioCyc:MetaCyc:MONOMER-12171 Uniprot:P80042
Length = 369
Score = 117 (46.2 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 33/88 (37%), Positives = 48/88 (54%)
Query: 40 NKTAALVSNSCKAVAYLSGQRE-EVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKAS 98
+KTAAL+ +S A L G EV L + + +GL +Q++DDILD T +S LGK +
Sbjct: 253 HKTAALLESSVVLGAILGGGTNVEVEKLR-RFARCIGLLFQVVDDILDVTKSSEELGKTA 311
Query: 99 LTDLRNGIITAPILFAMEEFPQLRAFIN 126
DL T P L +E+ + A +N
Sbjct: 312 GKDLVVDKTTYPKLLGLEKAKEFAAELN 339
Score = 39 (18.8 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 2 GNKLAILAGDLLISRA 17
G +A+LAGD L++ A
Sbjct: 179 GEDVAVLAGDSLLAFA 194
>TAIR|locus:2087550 [details] [associations]
symbol:AT3G20160 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;ISS] [GO:0006744 "ubiquinone
biosynthetic process" evidence=RCA] [GO:0004311
"farnesyltranstransferase activity" evidence=ISS]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00259 UniPathway:UPA00260 UniPathway:UPA00389
GO:GO:0005739 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AP000383 GO:GO:0016117 eggNOG:COG0142
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501
ProtClustDB:CLSN2913613 EMBL:DQ446678 EMBL:DQ653096 IPI:IPI00537582
RefSeq:NP_188651.1 UniGene:At.53400 ProteinModelPortal:Q9LJY2
SMR:Q9LJY2 STRING:Q9LJY2 EnsemblPlants:AT3G20160.1 GeneID:821560
KEGG:ath:AT3G20160 TAIR:At3g20160 InParanoid:Q9LJY2 OMA:RSYARCI
PhylomeDB:Q9LJY2 Genevestigator:Q9LJY2 Uniprot:Q9LJY2
Length = 344
Score = 122 (48.0 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 40 NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 99
+KTAAL+ + A + G +E Y + +GL +Q++DD+LD T +S LGK +
Sbjct: 228 HKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAG 287
Query: 100 TDLRNGIITAPILFAMEEFPQLRAFIN 126
DL G +T P L +E+ + +N
Sbjct: 288 KDLIAGKLTYPRLMGVEKSKEYAERLN 314
>UNIPROTKB|J9NVK1 [details] [associations]
symbol:PDSS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA] InterPro:IPR000092 Pfam:PF00348 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GeneTree:ENSGT00530000063378
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107
KO:K12505 OMA:QIGEAQE EMBL:AAEX03008588 EMBL:AAEX03008589
EMBL:AAEX03008590 RefSeq:XP_539071.2 Ensembl:ENSCAFT00000043165
GeneID:481950 KEGG:cfa:481950 Uniprot:J9NVK1
Length = 400
Score = 89 (36.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 18/62 (29%), Positives = 38/62 (61%)
Query: 27 TEVI-MECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDIL 85
TE I + + ++T+ AL++ SC+A L+ +V +AF+YGK++ +++++ D+
Sbjct: 240 TEDIGISTWKEQTFLSHGALLAKSCQAAMELAKHDADVQDMAFQYGKHMAMSHKINSDLQ 299
Query: 86 DF 87
F
Sbjct: 300 PF 301
Score = 76 (31.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+AIL+GD L++ A LA L++T+V+
Sbjct: 184 GNKIAILSGDFLLANACNGLALLQNTKVV 212
>UNIPROTKB|Q8PYS1 [details] [associations]
symbol:MM_0789 "Geranylfarnesyl diphosphate synthase"
species:192952 "Methanosarcina mazei Go1" [GO:0004659
"prenyltransferase activity" evidence=IDA] InterPro:IPR000092
Pfam:PF00348 Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576
GO:GO:0046872 EMBL:AE008384 GenomeReviews:AE008384_GR
eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
GO:GO:0004659 GO:GO:0044687 RefSeq:NP_632813.1 PDB:3IPI PDBsum:3IPI
ProteinModelPortal:Q8PYS1 DNASU:1479131 GeneID:1479131
KEGG:mma:MM_0789 HOGENOM:HOG000224637 KO:K02523 OMA:IAYQIVD
ProtClustDB:CLSK782700 EvolutionaryTrace:Q8PYS1 Uniprot:Q8PYS1
Length = 295
Score = 115 (45.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 34 YMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
Y + Y KTA+L + S AY G EE+A +G LG AYQ++DDIL+F
Sbjct: 167 YFKCIYKKTASLFAISASIGAYTGGAEEELAERFSHFGNALGTAYQIVDDILEF 220
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 6 AILAGDLLISRALVALASLKHTEVIME 32
A+L GD LI+++ +A S +VI +
Sbjct: 114 ALLCGDYLIAKS-IAFISPYGEKVIQD 139
>MGI|MGI:1918615 [details] [associations]
symbol:Pdss2 "prenyl (solanesyl) diphosphate synthase,
subunit 2" species:10090 "Mus musculus" [GO:0000010
"trans-hexaprenyltranstransferase activity" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006744 "ubiquinone
biosynthetic process" evidence=ISO;IDA] [GO:0008299 "isoprenoid
biosynthetic process" evidence=ISO;IDA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO;IDA] [GO:0050347
"trans-octaprenyltranstransferase activity" evidence=IDA]
[GO:0050878 "regulation of body fluid levels" evidence=IMP]
[GO:0051290 "protein heterotetramerization" evidence=IPI]
InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723
UniPathway:UPA00232 MGI:MGI:1918615 GO:GO:0005739
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0006744
GO:GO:0046982 GO:GO:0051290 GO:GO:0050878 eggNOG:COG0142
GeneTree:ENSGT00530000063378 GO:GO:0000010 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 CTD:57107 HOGENOM:HOG000294216
HOVERGEN:HBG058860 KO:K12505 OMA:QIGEAQE OrthoDB:EOG44QT18
EMBL:AB210840 EMBL:AK017329 EMBL:AK140091 EMBL:BC147693
EMBL:BC147694 EMBL:BC147752 EMBL:BC147753 IPI:IPI00316693
IPI:IPI00659599 IPI:IPI00672429 RefSeq:NP_001161761.1
RefSeq:NP_082048.2 UniGene:Mm.490430 ProteinModelPortal:Q33DR3
SMR:Q33DR3 STRING:Q33DR3 PhosphoSite:Q33DR3 PRIDE:Q33DR3
Ensembl:ENSMUST00000095725 Ensembl:ENSMUST00000159139 GeneID:71365
KEGG:mmu:71365 UCSC:uc007ezh.2 UCSC:uc007ezi.2 UCSC:uc011xdk.1
InParanoid:B2RWA7 ChiTaRS:PDSS2 NextBio:333637 Bgee:Q33DR3
Genevestigator:Q33DR3 GermOnline:ENSMUSG00000038240 Uniprot:Q33DR3
Length = 401
Score = 88 (36.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 18/69 (26%), Positives = 39/69 (56%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDF 87
++ + + ++T+ AL++ SC+A L+ V +AF+YGK++ +++++ D+ F
Sbjct: 243 DIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPF 302
Query: 88 TGTSASLGK 96
AS K
Sbjct: 303 IKDKASDSK 311
Score = 76 (31.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 15/29 (51%), Positives = 23/29 (79%)
Query: 2 GNKLAILAGDLLISRALVALASLKHTEVI 30
GNK+AIL+GD L++ A LA L++T+V+
Sbjct: 185 GNKIAILSGDFLLANACNGLALLQNTKVV 213
>TIGR_CMR|CPS_1089 [details] [associations]
symbol:CPS_1089 "geranyltranstransferase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_267833.1
ProteinModelPortal:Q487D2 STRING:Q487D2 GeneID:3518499
KEGG:cps:CPS_1089 PATRIC:21465449 OMA:KTCTEIC
BioCyc:CPSY167879:GI48-1171-MONOMER Uniprot:Q487D2
Length = 300
Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/77 (38%), Positives = 40/77 (51%)
Query: 41 KTAALVSNSCKAVAYLSGQ-REEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 99
KT AL+ S A SGQ E + EY + +GLAYQ+ DDI+D T T LGK
Sbjct: 185 KTGALLEASVLMPAMCSGQVTREYKIILSEYAQLIGLAYQVQDDIIDLTSTEEELGKPVG 244
Query: 100 TDLRNGIITAPILFAME 116
+D+ T P L ++
Sbjct: 245 SDIAANKSTYPALLGLQ 261
>TAIR|locus:2089626 [details] [associations]
symbol:AT3G14530 "AT3G14530" species:3702 "Arabidopsis
thaliana" [GO:0004311 "farnesyltranstransferase activity"
evidence=ISS] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
eggNOG:COG0142 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:AB023038 KO:K13789 GO:GO:0051501
EMBL:BT010463 IPI:IPI00517639 RefSeq:NP_188071.1 UniGene:At.48659
ProteinModelPortal:Q9LUE1 SMR:Q9LUE1 STRING:Q9LUE1
EnsemblPlants:AT3G14530.1 GeneID:820678 KEGG:ath:AT3G14530
TAIR:At3g14530 InParanoid:Q9LUE1 PhylomeDB:Q9LUE1
ProtClustDB:CLSN2682670 Genevestigator:Q9LUE1 Uniprot:Q9LUE1
Length = 360
Score = 119 (46.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/107 (30%), Positives = 60/107 (56%)
Query: 13 LISRALVALAS--LKHTEVIMECYMQKTY-NKTAALVSNSCKAVAYLSGQREEVATLAFE 69
L++ ++ LAS L +V +E +++ + +KTAAL+ + + G E+ +
Sbjct: 215 LVAGQMIDLASERLNPDKVGLE-HLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRK 273
Query: 70 YGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAME 116
Y + +GL +Q++DDILD T ++ LGK + D+ G +T P L +E
Sbjct: 274 YARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLE 320
>UNIPROTKB|O50410 [details] [associations]
symbol:idsB "Geranylgeranyl diphosphate synthase, type I"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00723 GO:GO:0005829 GenomeReviews:AL123456_GR
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
EMBL:BX842582 GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001
HOGENOM:HOG000009101 KO:K13787 EMBL:CP003248 PIR:F70973
RefSeq:NP_217900.1 RefSeq:YP_006516867.1 ProteinModelPortal:O50410
SMR:O50410 EnsemblBacteria:EBMYCT00000000229 GeneID:13316985
GeneID:887680 KEGG:mtu:Rv3383c KEGG:mtv:RVBD_3383c PATRIC:18156138
TubercuList:Rv3383c OMA:DLISEHK ProtClustDB:CLSK792459
Uniprot:O50410
Length = 350
Score = 116 (45.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 29/89 (32%), Positives = 45/89 (50%)
Query: 28 EVIMECYMQKTYNKTAALVSNSCKAVAYLSGQREEVATLAFE-YGKNLGLAYQLIDDILD 86
EV ++ Y++ KTAAL + C A+ L ++ A E +G LGLA+Q +DD++
Sbjct: 186 EVTVDDYLRMAAGKTAAL-TGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIG 244
Query: 87 FTGTSASLGKASLTDLRNGIITAPILFAM 115
G GK DL T P++ A+
Sbjct: 245 IWGDPGVTGKPVGNDLARRKATLPVVAAL 273
>UNIPROTKB|Q4K5A6 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:220664
"Pseudomonas protegens Pf-5" [GO:0004337 "geranyltranstransferase
activity" evidence=ISS] [GO:0045337 "farnesyl diphosphate
biosynthetic process" evidence=ISS] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000076
GenomeReviews:CP000076_GR eggNOG:COG0142 InterPro:IPR017446
PANTHER:PTHR12001 HOGENOM:HOG000009101 GO:GO:0004337 GO:GO:0045337
KO:K13789 OMA:DLISEHK RefSeq:YP_262577.1 PDB:3LJI PDB:3LSN PDB:3P41
PDBsum:3LJI PDBsum:3LSN PDBsum:3P41 ProteinModelPortal:Q4K5A6
STRING:Q4K5A6 DNASU:3479897 GeneID:3479897 KEGG:pfl:PFL_5509
PATRIC:19880507 ProtClustDB:CLSK868404
BioCyc:PFLU220664:GIX8-5546-MONOMER EvolutionaryTrace:Q4K5A6
Uniprot:Q4K5A6
Length = 295
Score = 114 (45.2 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 40/119 (33%), Positives = 59/119 (49%)
Query: 1 MGNKLAILAGDL-LISRALVALAS--LKHTEVIMECYMQKTYNKTAALVSNSCKAVAYLS 57
M LA AG ++ + L S LK + +E YM + +KT AL+ S A S
Sbjct: 140 MVTTLAQAAGPAGMVGGQAIDLGSVGLKLDQQALE-YMHR--HKTGALIEASVILGALAS 196
Query: 58 GQREEVATLAFE-YGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAM 115
G+ E+ A + Y + +GLA+Q+ DDILD +A+LGK D+ T P L +
Sbjct: 197 GRAEKGELKALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALLGL 255
>UNIPROTKB|Q0C153 [details] [associations]
symbol:ispA "Geranyltranstransferase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004337
"geranyltranstransferase activity" evidence=ISS] [GO:0008299
"isoprenoid biosynthetic process" evidence=ISS] InterPro:IPR000092
Pfam:PF00348 PROSITE:PS00444 PROSITE:PS00723 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 HOGENOM:HOG000009101
GO:GO:0004337 KO:K00795 RefSeq:YP_760540.1
ProteinModelPortal:Q0C153 STRING:Q0C153 GeneID:4289927
KEGG:hne:HNE_1839 PATRIC:32216509 OMA:ICKDISK
ProtClustDB:CLSK2780959 BioCyc:HNEP228405:GI69-1865-MONOMER
Uniprot:Q0C153
Length = 295
Score = 102 (41.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 41 KTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASLT 100
KT AL+S + +A + RE + +LGLAYQ+ DDILD G + +GKA
Sbjct: 181 KTGALISYALEAGGIIGHAREAERNALAGFANDLGLAYQIADDILDAEGDESIVGKAVSK 240
Query: 101 D 101
D
Sbjct: 241 D 241
Score = 44 (20.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 6 AILAGDLLISRALVALAS 23
A+LAGD L++ A LAS
Sbjct: 111 AVLAGDALLTLAFKILAS 128
>TAIR|locus:2048993 [details] [associations]
symbol:GGPS2 "geranylgeranyl pyrophosphate synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0006744 "ubiquinone biosynthetic
process" evidence=RCA] [GO:0004311 "farnesyltranstransferase
activity" evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005783 GO:GO:0005739
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
GO:GO:0016117 EMBL:AC004482 eggNOG:COG0142 GO:GO:0008299
InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 KO:K13789 GO:GO:0051501 EMBL:U44876
EMBL:BT005328 EMBL:AK117954 EMBL:AY087521 EMBL:D85029
IPI:IPI00535829 PIR:S71230 PIR:T02429 RefSeq:NP_179960.1
UniGene:At.1550 ProteinModelPortal:O04046 SMR:O04046 STRING:O04046
PaxDb:O04046 PRIDE:O04046 EnsemblPlants:AT2G23800.1 GeneID:816912
KEGG:ath:AT2G23800 TAIR:At2g23800 InParanoid:O04046 OMA:QSMKTGA
PhylomeDB:O04046 ProtClustDB:CLSN2912871
BioCyc:ARA:AT2G23800-MONOMER BioCyc:MetaCyc:AT2G23800-MONOMER
Genevestigator:O04046 GermOnline:AT2G23800 Uniprot:O04046
Length = 376
Score = 113 (44.8 bits), Expect = 0.00016, P = 0.00016
Identities = 32/108 (29%), Positives = 59/108 (54%)
Query: 12 LLISRAL-VALASLKHTEVIMECYMQKTY-NKTAALVSNSCKAVAYLSGQREEVATLAFE 69
L+ +A+ ++ L EV +E +++ + +KTA L+ + A + G +E +
Sbjct: 231 LVAGQAMDISSEGLDLNEVGLE-HLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRK 289
Query: 70 YGKNLGLAYQLIDDILDFTGTSASLGKASLTDLRNGIITAPILFAMEE 117
+ + +GL +Q++DDILD T +S LGK + D G +T P L +E+
Sbjct: 290 FARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEK 337
>TAIR|locus:2010182 [details] [associations]
symbol:GGPS6 "geranylgeranyl pyrophosphate synthase 6"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0008299 "isoprenoid biosynthetic process"
evidence=IEA;ISS;TAS] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IGI;IDA] InterPro:IPR000092 Pfam:PF00348 PROSITE:PS00444
PROSITE:PS00723 UniPathway:UPA00259 UniPathway:UPA00260
UniPathway:UPA00389 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 GO:GO:0009536 GO:GO:0016020 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872 GO:GO:0016117
EMBL:AC007504 eggNOG:COG0142 GO:GO:0008299 InterPro:IPR017446
PANTHER:PTHR12001 GO:GO:0004311 HOGENOM:HOG000009101 GO:GO:0004161
GO:GO:0004337 GO:GO:0045337 GO:GO:0033384 GO:GO:0033386 KO:K13789
GO:GO:0051501 EMBL:AB000835 EMBL:BT011230 EMBL:BT012158
IPI:IPI00537288 RefSeq:NP_175376.1 UniGene:At.38214
UniGene:At.49962 ProteinModelPortal:O22043 SMR:O22043 STRING:O22043
EnsemblPlants:AT1G49530.1 GeneID:841377 KEGG:ath:AT1G49530
TAIR:At1g49530 InParanoid:O22043 OMA:LCLVACE PhylomeDB:O22043
ProtClustDB:CLSN2913613 Genevestigator:O22043 GermOnline:AT1G49530
Uniprot:O22043
Length = 336
Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 34 YMQKTY-NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSA 92
Y++ + +KTA LV + A + G +E Y + +GL +Q++DD+LD T +S
Sbjct: 213 YLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLDETKSSE 272
Query: 93 SLGKASLTDLRNGIITAPILFAME 116
LGK + DL G +T P + ++
Sbjct: 273 ELGKTAGKDLITGKLTYPKVMGVD 296
>TAIR|locus:2115450 [details] [associations]
symbol:GGPS1 "geranylgeranyl pyrophosphate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0008299 "isoprenoid
biosynthetic process" evidence=IEA;TAS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0004311 "farnesyltranstransferase activity"
evidence=IDA] [GO:0009513 "etioplast" evidence=IDA] [GO:0004161
"dimethylallyltranstransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] InterPro:IPR000092 Pfam:PF00348
PROSITE:PS00444 PROSITE:PS00723 UniPathway:UPA00259
UniPathway:UPA00260 UniPathway:UPA00389 GO:GO:0005739 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0046872
EMBL:AL161590 GO:GO:0016117 EMBL:Z99708 eggNOG:COG0142
GO:GO:0008299 InterPro:IPR017446 PANTHER:PTHR12001 GO:GO:0004311
HOGENOM:HOG000009101 GO:GO:0004161 GO:GO:0004337 GO:GO:0045337
GO:GO:0033384 GO:GO:0033386 EMBL:L25813 IPI:IPI00516537 PIR:F85434
RefSeq:NP_195399.1 UniGene:At.304 ProteinModelPortal:P34802
SMR:P34802 STRING:P34802 PaxDb:P34802 PRIDE:P34802
EnsemblPlants:AT4G36810.1 GeneID:829834 KEGG:ath:AT4G36810
TAIR:At4g36810 InParanoid:P34802 KO:K13789 OMA:MEFAHAV
PhylomeDB:P34802 ProtClustDB:CLSN2915918
BioCyc:ARA:AT4G36810-MONOMER BioCyc:MetaCyc:AT4G36810-MONOMER
BRENDA:2.5.1.29 Genevestigator:P34802 GermOnline:AT4G36810
GO:GO:0009513 GO:GO:0051501 Uniprot:P34802
Length = 371
Score = 111 (44.1 bits), Expect = 0.00028, P = 0.00028
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 40 NKTAALVSNSCKAVAYLSGQREEVATLAFEYGKNLGLAYQLIDDILDFTGTSASLGKASL 99
+KTAAL+ S A + G ++ ++ + +GL +Q++DDILD T +S LGK +
Sbjct: 255 HKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAG 314
Query: 100 TDLRNGIITAPILFAMEEFPQLRAFIN 126
DL +T P + +E+ + +N
Sbjct: 315 KDLIADKLTYPKIMGLEKSREFAEKLN 341
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.359 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 196 184 0.00078 110 3 11 22 0.43 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 76
No. of states in DFA: 558 (59 KB)
Total size of DFA: 130 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.75u 0.14s 15.89t Elapsed: 00:00:01
Total cpu time: 15.76u 0.14s 15.90t Elapsed: 00:00:01
Start: Fri May 10 12:35:41 2013 End: Fri May 10 12:35:42 2013