BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029267
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M4W3|ISPF_CATRO 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
chloroplastic OS=Catharanthus roseus GN=ISPF PE=2 SV=1
Length = 236
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/168 (61%), Positives = 124/168 (73%), Gaps = 11/168 (6%)
Query: 3 LTMAAQSYTTTPLHRKITNKP----LCPPLLSLKPRSLTAKHLR--TTQSTSLPRISVSA 56
+ MA Y +T + K TN+ LC P+ K T ++R T QS +L + +A
Sbjct: 1 MAMATSFYCSTAIPSKKTNQNRENFLCSPVGGSK---TTPSYIRLSTRQSRTLSLVVSAA 57
Query: 57 AATSSIEVKESSASIQPSKSKSLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSD 116
A+ +++E + A++ PSK L FRVGHGFDLHRLEPGYPLIIGGIN+PH+RGCEAHSD
Sbjct: 58 ASGAAVEAEPKFAAVTPSKI--LSFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSD 115
Query: 117 GDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRFF 164
GDVLLHCVVDAILGALGLPDIGQIFPD+DPKWKGAPSSVFIKEAVR
Sbjct: 116 GDVLLHCVVDAILGALGLPDIGQIFPDTDPKWKGAPSSVFIKEAVRLM 163
>sp|Q9CAK8|ISPF_ARATH 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
chloroplastic OS=Arabidopsis thaliana GN=ISPF PE=1 SV=1
Length = 231
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/102 (83%), Positives = 92/102 (90%), Gaps = 2/102 (1%)
Query: 63 EVKESSASIQPSKSKSLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLH 122
+V ES S +P+K+ LPFR+GHGFDLHRLEPGYPLIIGGI +PH+RGCEAHSDGDVLLH
Sbjct: 59 DVNESVTSEKPTKT--LPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDGDVLLH 116
Query: 123 CVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRFF 164
CVVDAILGALGLPDIGQIFPDSDPKWKGA SSVFIKEAVR
Sbjct: 117 CVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLM 158
>sp|Q6EPN6|ISPF_ORYSJ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase,
chloroplastic OS=Oryza sativa subsp. japonica GN=ISPF
PE=2 SV=1
Length = 222
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 100/128 (78%), Gaps = 5/128 (3%)
Query: 42 RTTQSTSLPRISV-----SAAATSSIEVKESSASIQPSKSKSLPFRVGHGFDLHRLEPGY 96
R+T S S R S+ S A ++++ + A K +LPFRVGHGFDLHRLEPG
Sbjct: 22 RSTPSASPARPSLRLRRPSTLAAAAVQAEHQPAVAAAPKPPALPFRVGHGFDLHRLEPGL 81
Query: 97 PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVF 156
PLIIGGI++PH+RGC+AHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDP+WKGA SSVF
Sbjct: 82 PLIIGGIDIPHDRGCDAHSDGDVLLHCVVDAILGALGLPDIGQIFPDSDPRWKGADSSVF 141
Query: 157 IKEAVRFF 164
++EAV+
Sbjct: 142 MREAVKLM 149
>sp|A9II47|ISPF_BORPD 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella
petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448)
GN=ispF PE=3 SV=1
Length = 162
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 64/84 (76%)
Query: 78 SLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDI 137
++PFRVG G+D+H L G PLIIGG+ +PH G + HSD DVLLH V DA+LGA GL DI
Sbjct: 2 NVPFRVGQGYDVHALVAGRPLIIGGVTIPHTHGLQGHSDADVLLHAVTDALLGAAGLGDI 61
Query: 138 GQIFPDSDPKWKGAPSSVFIKEAV 161
G+ FPD+DP ++GA S V +++AV
Sbjct: 62 GRHFPDTDPAYRGADSRVLLRDAV 85
>sp|Q2KUX6|ISPF_BORA1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella
avium (strain 197N) GN=ispF PE=3 SV=1
Length = 162
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 63/84 (75%)
Query: 78 SLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDI 137
++PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DAILGA GL DI
Sbjct: 2 TIPFRVGQGFDVHALVTGRPLIIGGVRIEHSHGLLGHSDADVLLHAVTDAILGAAGLGDI 61
Query: 138 GQIFPDSDPKWKGAPSSVFIKEAV 161
G+ FPD+DP++KGA S V ++EA+
Sbjct: 62 GRHFPDTDPRFKGADSRVLLREAM 85
>sp|Q2NAE1|ISPDF_ERYLH Bifunctional enzyme IspD/IspF OS=Erythrobacter litoralis (strain
HTCC2594) GN=ispDF PE=3 SV=1
Length = 386
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
LP RVG GFD+H+LE G L +GGI + H++G HSD DV LH +VDA+LGA+G DIG
Sbjct: 224 LPVRVGTGFDVHKLEAGEELWLGGIRLEHDKGLAGHSDADVALHAIVDALLGAIGKGDIG 283
Query: 139 QIFPDSDPKWKGAPSSVFIKEAVRF 163
FP SDP+WKGA SS FI+ A +
Sbjct: 284 DHFPPSDPQWKGAASSAFIEHAAKL 308
>sp|Q1IVA8|ISPF_KORVE 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Koribacter
versatilis (strain Ellin345) GN=ispF PE=3 SV=1
Length = 155
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 57/82 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
RVG GFD H G PL IGG+ +PH G HSDGDVLLH + DA+LGA+ DIG
Sbjct: 2 IRVGLGFDSHEFREGIPLRIGGLTIPHTHGLSGHSDGDVLLHAITDALLGAVAAGDIGAF 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVR 162
FP SDPKWKGA S VFI+EA+R
Sbjct: 62 FPPSDPKWKGANSVVFIEEAMR 83
>sp|Q5NYK0|ISPF_AROAE 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Aromatoleum aromaticum (strain EbN1) GN=ispF PE=3
SV=1
Length = 165
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 60/81 (74%)
Query: 80 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQ 139
PFR+G GFD+H L PG LI+GG+++P ERG HSD DVLLH + DA+LGA GL DIG+
Sbjct: 4 PFRIGQGFDVHALVPGRALIVGGVHIPFERGLLGHSDADVLLHALTDALLGAAGLGDIGR 63
Query: 140 IFPDSDPKWKGAPSSVFIKEA 160
+FPD+D GA S V ++EA
Sbjct: 64 LFPDTDAAHAGADSRVLLREA 84
>sp|Q63T71|ISPF_BURPS 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia pseudomallei (strain K96243) GN=ispF
PE=1 SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|A3NAL8|ISPF_BURP6 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia pseudomallei (strain 668) GN=ispF PE=3
SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|Q3JRA0|ISPF_BURP1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia pseudomallei (strain 1710b) GN=ispF PE=1
SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|A3NWD9|ISPF_BURP0 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia pseudomallei (strain 1106a) GN=ispF PE=3
SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|A1V4Z9|ISPF_BURMS 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia mallei (strain SAVP1) GN=ispF PE=3 SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|Q62JI6|ISPF_BURMA 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia mallei (strain ATCC 23344) GN=ispF PE=3
SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|A2SBD7|ISPF_BURM9 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia mallei (strain NCTC 10229) GN=ispF PE=3
SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|A3MKM3|ISPF_BURM7 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia mallei (strain NCTC 10247) GN=ispF PE=3
SV=1
Length = 162
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|Q747A0|ISPF_GEOSL 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=ispF PE=3 SV=1
Length = 157
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 60/83 (72%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
R+GHG+D+HRL G LI+GG+++PHE G HSD DVLLH + DAILGAL L DIG+
Sbjct: 1 MRIGHGYDVHRLVAGRKLIVGGVDIPHELGLLGHSDADVLLHAISDAILGALALGDIGKH 60
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP++KGA S ++ +
Sbjct: 61 FPDTDPRYKGADSRALLRHVMEL 83
>sp|Q2SWT5|ISPF_BURTA 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=ispF PE=3 SV=1
Length = 162
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 60/81 (74%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+DP++KGA S ++E
Sbjct: 61 RHFSDTDPRFKGADSRALLRE 81
>sp|Q0A7K7|ISPF_ALHEH 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=ispF
PE=3 SV=1
Length = 164
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 81 FRVGHGFDLHRL-EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQ 139
RVG GFD HR EPG PLI+GG+ VPHERG AHSDGDVL+H V D +LGA G D+G
Sbjct: 2 IRVGQGFDAHRFGEPGTPLILGGVQVPHERGLAAHSDGDVLMHAVTDGLLGAAGEGDLGT 61
Query: 140 IFPDSDPKWKGAPSSVFIKEAVR 162
FPDSD +KG S + +++A++
Sbjct: 62 HFPDSDDAYKGIDSRILLRDALQ 84
>sp|A1K645|ISPF_AZOSB 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Azoarcus
sp. (strain BH72) GN=ispF PE=3 SV=1
Length = 162
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 59/81 (72%)
Query: 80 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQ 139
PFRVG GFD+H L PG LI+GG+++P G HSD DVLLH + DA+LGA GL DIG+
Sbjct: 4 PFRVGQGFDVHALVPGRALIVGGVDIPFSAGLLGHSDADVLLHALTDALLGAAGLGDIGR 63
Query: 140 IFPDSDPKWKGAPSSVFIKEA 160
+FPD+DP GA S V ++EA
Sbjct: 64 LFPDTDPAHAGADSRVLLREA 84
>sp|Q2SKW6|ISPF_HAHCH 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Hahella
chejuensis (strain KCTC 2396) GN=ispF PE=3 SV=1
Length = 163
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 81 FRVGHGFDLHRL-EPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQ 139
FR+GHGFD+H E G ++IGG+N+PHERG +AHSDGDVLLH + DA+LGA DIG+
Sbjct: 4 FRIGHGFDVHAFSETGDLIVIGGVNIPHERGLQAHSDGDVLLHAICDALLGAAAFGDIGK 63
Query: 140 IFPDSDPKWKGAPSSVFIKEAV 161
FPD+DP + GA S ++ V
Sbjct: 64 HFPDTDPSFSGADSRNLLRSVV 85
>sp|Q1LLZ4|ISPF_RALME 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=ispF PE=3 SV=1
Length = 168
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 80 PF--RVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDI 137
PF R+G G+D+H L PG LI+GG+++PH+RG HSD D LLH V DA+ GA L DI
Sbjct: 3 PFDIRIGQGYDVHALVPGRKLILGGVDIPHDRGLLGHSDADALLHAVTDALFGAAALGDI 62
Query: 138 GQIFPDSDPKWKGAPSSVFIKEAVR 162
G+ FPD+DP + GA S V ++EAVR
Sbjct: 63 GRHFPDTDPNFAGADSRVLLREAVR 87
>sp|A8G9Z3|ISPF_SERP5 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Serratia
proteamaculans (strain 568) GN=ispF PE=3 SV=1
Length = 157
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 60/80 (75%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
R+GHGFD+H+ PL+IGG+ +P+E+G AHSDGDV LH DA+LGA L DIG++
Sbjct: 1 MRIGHGFDVHKFGGEGPLVIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIGKL 60
Query: 141 FPDSDPKWKGAPSSVFIKEA 160
FPD+DP +KGA S V ++EA
Sbjct: 61 FPDTDPAFKGADSRVLLREA 80
>sp|Q7VZN1|ISPF_BORPE 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella
pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
GN=ispF PE=3 SV=1
Length = 162
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%)
Query: 78 SLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDI 137
++PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DA+LG GL DI
Sbjct: 2 NIPFRVGQGFDVHALVEGRPLIIGGVTIAHTHGLLGHSDADVLLHAVTDALLGGAGLGDI 61
Query: 138 GQIFPDSDPKWKGAPSSVFIKEA 160
G+ FPD+DP ++GA S V ++ A
Sbjct: 62 GRHFPDTDPAYRGADSRVLLRAA 84
>sp|Q7W5D0|ISPF_BORPA 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bordetella
parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
GN=ispF PE=3 SV=1
Length = 162
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%)
Query: 78 SLPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDI 137
++PFRVG GFD+H L G PLIIGG+ + H G HSD DVLLH V DA+LG GL DI
Sbjct: 2 NIPFRVGQGFDVHALVEGRPLIIGGVTIAHTHGLLGHSDADVLLHAVTDALLGGAGLGDI 61
Query: 138 GQIFPDSDPKWKGAPSSVFIKEA 160
G+ FPD+DP ++GA S V ++ A
Sbjct: 62 GRHFPDTDPAYRGADSRVLLRAA 84
>sp|B1HNM6|ISPF_LYSSC 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Lysinibacillus sphaericus (strain C3-41) GN=ispF PE=3
SV=1
Length = 158
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 57/78 (73%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H E G PLIIGGI +PHE+G HSD DVLLH V DA LGA+G DIG+
Sbjct: 2 FRIGQGFDVHAFEEGRPLIIGGITIPHEKGLVGHSDADVLLHTVTDAALGAIGEGDIGRH 61
Query: 141 FPDSDPKWKGAPSSVFIK 158
FPD+DP +K A S+ ++
Sbjct: 62 FPDTDPAFKDADSAKLLE 79
>sp|B1YS10|ISPF_BURA4 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia ambifaria (strain MC40-6) GN=ispF PE=3
SV=1
Length = 161
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+D +KGA S V ++E
Sbjct: 61 RHFSDTDAAFKGADSRVLLRE 81
>sp|C5BGJ0|ISPF_EDWI9 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Edwardsiella ictaluri (strain 93-146) GN=ispF PE=3
SV=1
Length = 157
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 58/82 (70%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
R+GHGFD+HR PLIIGG+ + H +G AHSDGDV LH DA+LGA L DIG++
Sbjct: 1 MRIGHGFDVHRFGGEGPLIIGGVRIAHPQGLLAHSDGDVALHAATDALLGAAALGDIGKL 60
Query: 141 FPDSDPKWKGAPSSVFIKEAVR 162
FPD+DP +KGA S ++EA R
Sbjct: 61 FPDTDPAYKGADSRALLREAYR 82
>sp|Q839V8|ISPF_ENTFA 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=ispF PE=3 SV=1
Length = 157
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 60/79 (75%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
R+G GFD+H+L P PLIIGG+ +P+E+G HSD DVL H ++DAILGA GL DIGQ+
Sbjct: 2 IRIGQGFDVHQLVPQRPLIIGGVTLPYEKGLLGHSDADVLTHAIIDAILGAAGLGDIGQL 61
Query: 141 FPDSDPKWKGAPSSVFIKE 159
FP++DP++K A S +K+
Sbjct: 62 FPETDPQFKNANSVNLLKK 80
>sp|A4JF19|ISPF_BURVG 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
GN=ispF PE=3 SV=1
Length = 158
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+D +KGA S V ++E
Sbjct: 61 RHFSDTDAAFKGADSRVLLRE 81
>sp|Q0BED7|ISPF_BURCM 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=ispF PE=3 SV=1
Length = 161
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 59/81 (72%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L PG PLIIGG+ +P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+D +KGA S V ++E
Sbjct: 61 RHFSDTDAAFKGADSRVLLRE 81
>sp|A1JJT5|ISPF_YERE8 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=ispF PE=3 SV=1
Length = 162
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 81 FRVGHGFDLHRL-EPGY-PLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
R+GHGFD+H+ E G PLIIGG+ +P+E+G AHSDGDV LH DA+LGA L DIG
Sbjct: 1 MRIGHGFDVHKFGENGSGPLIIGGVRIPYEKGLLAHSDGDVALHAATDALLGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKEAVR 162
++FPD+DP +KGA S ++EA R
Sbjct: 61 KLFPDTDPAFKGADSRALLREAYR 84
>sp|A9VN99|ISPF_BACWK 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
weihenstephanensis (strain KBAB4) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|Q6HPT1|ISPF_BACHK 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
thuringiensis subsp. konkukian (strain 97-27) GN=ispF
PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|Q63HB3|ISPF_BACCZ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
cereus (strain ZK / E33L) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|Q81J62|ISPF_BACCR 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
cereus (strain ATCC 14579 / DSM 31) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|B9IZH1|ISPF_BACCQ 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
cereus (strain Q1) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|B7HQS1|ISPF_BACC7 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
cereus (strain AH187) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|C1ET16|ISPF_BACC3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
cereus (strain 03BB102) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|B7ISZ6|ISPF_BACC2 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
cereus (strain G9842) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|B7JK94|ISPF_BACC0 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
cereus (strain AH820) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|Q81VV4|ISPF_BACAN 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
anthracis GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|A0R8F8|ISPF_BACAH 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
thuringiensis (strain Al Hakam) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|C3LJ59|ISPF_BACAC 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
anthracis (strain CDC 684 / NRRL 3495) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|C3P9N2|ISPF_BACAA 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Bacillus
anthracis (strain A0248) GN=ispF PE=3 SV=1
Length = 158
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 58/83 (69%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
FR+G GFD+H G PLIIGGI +PHE+G HSD DVLLH + DA LGA+ DIG+
Sbjct: 2 FRIGQGFDVHEFAEGRPLIIGGITIPHEKGLIGHSDADVLLHTIADACLGAIAAGDIGKH 61
Query: 141 FPDSDPKWKGAPSSVFIKEAVRF 163
FPD+DP +K A S+V +++ F
Sbjct: 62 FPDTDPAFKDADSAVLLQKVWEF 84
>sp|B2VFZ6|ISPF_ERWT9 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=ispF PE=3
SV=1
Length = 157
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 60/82 (73%)
Query: 81 FRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQI 140
R+GHGFD+H PLIIGG+ +P+E+G AHSDGDV LH + DA+LGA L DIG++
Sbjct: 1 MRIGHGFDVHAFGGEGPLIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL 60
Query: 141 FPDSDPKWKGAPSSVFIKEAVR 162
FPD+D +KGA S ++EA+R
Sbjct: 61 FPDTDEAYKGADSRELLREALR 82
>sp|B2T3X3|ISPF_BURPP 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
GN=ispF PE=3 SV=1
Length = 159
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 58/81 (71%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H L PG PLIIGG+ +P+ERG HSD DVLLH + DAI GA + DIG
Sbjct: 1 MDFRIGQGYDVHALVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDAIFGAAAMGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKE 159
+ F D+D K+ GA S V ++E
Sbjct: 61 RHFSDTDAKFAGADSRVLLRE 81
>sp|B2RGP8|ISPF_PORG3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM
20709 / JCM 12257) GN=ispF PE=3 SV=1
Length = 162
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 58/84 (69%)
Query: 80 PFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIGQ 139
PFR+G GFD+HRL GYPL +GG+ + H +G E HSD DVL+H + DA+LGA L DIG
Sbjct: 4 PFRIGFGFDVHRLSEGYPLWMGGVRLEHSKGLEGHSDADVLIHAICDALLGAAALRDIGY 63
Query: 140 IFPDSDPKWKGAPSSVFIKEAVRF 163
FP SDP++KG S + + A+
Sbjct: 64 HFPPSDPQYKGIDSKILLARAMEL 87
>sp|A9AIT6|ISPF_BURM1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=ispF PE=3 SV=1
Length = 161
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 60/83 (72%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ FR+G G+D+H+L G PLIIGG+++P+ERG HSD DVLLH + DA+ GA L DIG
Sbjct: 1 MDFRIGQGYDVHQLVAGRPLIIGGVSIPYERGLLGHSDADVLLHAITDALFGAAALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKEAV 161
+ F D+D +KGA S V ++E V
Sbjct: 61 RHFSDTDAAFKGADSRVLLRECV 83
>sp|A8H1S8|ISPF_SHEPA 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Shewanella
pealeana (strain ATCC 700345 / ANG-SQ1) GN=ispF PE=3
SV=1
Length = 159
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 79 LPFRVGHGFDLHRLEPGYPLIIGGINVPHERGCEAHSDGDVLLHCVVDAILGALGLPDIG 138
+ R+GHGFD+H+ PLI+GGI VP+E G AHSDGDV+LH + DAILGA+ L DIG
Sbjct: 1 MKIRIGHGFDVHKFGGEPPLILGGITVPYEVGLIAHSDGDVVLHAISDAILGAMALGDIG 60
Query: 139 QIFPDSDPKWKGAPSSVFIKEAVRF 163
+ FPD+DP +KGA S V ++ +
Sbjct: 61 KHFPDTDPDFKGADSRVLLRHCYKL 85
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,709,732
Number of Sequences: 539616
Number of extensions: 2928782
Number of successful extensions: 7572
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6980
Number of HSP's gapped (non-prelim): 548
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)