Query 029271
Match_columns 196
No_of_seqs 165 out of 1255
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 16:39:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029271.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029271hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ors_A N5-carboxyaminoimidazol 100.0 4.3E-61 1.5E-65 394.3 14.2 146 51-196 2-150 (163)
2 3trh_A Phosphoribosylaminoimid 100.0 1.2E-60 4E-65 393.5 16.0 145 52-196 6-153 (169)
3 3lp6_A Phosphoribosylaminoimid 100.0 1.1E-60 3.7E-65 395.2 15.0 147 50-196 5-152 (174)
4 3kuu_A Phosphoribosylaminoimid 100.0 1.4E-60 4.6E-65 394.5 15.0 148 49-196 9-159 (174)
5 1xmp_A PURE, phosphoribosylami 100.0 1.8E-60 6.2E-65 392.5 14.6 145 52-196 11-158 (170)
6 3oow_A Phosphoribosylaminoimid 100.0 4.5E-60 1.5E-64 389.1 14.9 145 52-196 5-152 (166)
7 1o4v_A Phosphoribosylaminoimid 100.0 6.6E-60 2.3E-64 393.0 14.8 145 52-196 13-158 (183)
8 1u11_A PURE (N5-carboxyaminoim 100.0 1.8E-59 6.1E-64 390.2 14.6 145 52-196 21-168 (182)
9 4grd_A N5-CAIR mutase, phospho 100.0 5.6E-59 1.9E-63 384.4 15.3 148 49-196 9-159 (173)
10 4b4k_A N5-carboxyaminoimidazol 100.0 7.5E-59 2.6E-63 385.8 15.8 145 52-196 22-169 (181)
11 3rg8_A Phosphoribosylaminoimid 100.0 1.1E-58 3.8E-63 378.8 16.2 143 52-196 2-145 (159)
12 2ywx_A Phosphoribosylaminoimid 100.0 5.8E-58 2E-62 373.8 13.9 139 54-196 1-140 (157)
13 2h31_A Multifunctional protein 100.0 3.8E-56 1.3E-60 409.6 17.8 186 7-195 214-407 (425)
14 3uhj_A Probable glycerol dehyd 97.4 0.00026 8.7E-09 63.8 6.6 87 53-140 53-140 (387)
15 1jq5_A Glycerol dehydrogenase; 97.3 0.00028 9.7E-09 62.1 5.3 88 53-140 32-120 (370)
16 3ce9_A Glycerol dehydrogenase; 97.0 0.00093 3.2E-08 58.5 6.2 88 53-141 35-123 (354)
17 3bfj_A 1,3-propanediol oxidore 97.0 0.0016 5.4E-08 57.8 7.3 88 53-140 34-144 (387)
18 1o2d_A Alcohol dehydrogenase, 96.9 0.0026 8.8E-08 56.4 8.3 89 53-141 41-151 (371)
19 3ox4_A Alcohol dehydrogenase 2 96.9 0.001 3.6E-08 59.3 5.6 89 53-141 32-141 (383)
20 3okf_A 3-dehydroquinate syntha 96.9 0.0033 1.1E-07 57.0 8.7 88 52-139 62-158 (390)
21 3hl0_A Maleylacetate reductase 96.8 0.00074 2.5E-08 59.9 3.9 86 53-140 35-121 (353)
22 1sg6_A Pentafunctional AROM po 96.8 0.0035 1.2E-07 56.0 8.3 87 53-139 37-140 (393)
23 1vlj_A NADH-dependent butanol 96.7 0.0045 1.6E-07 55.4 8.2 86 53-140 44-153 (407)
24 1ta9_A Glycerol dehydrogenase; 96.7 0.0013 4.5E-08 60.3 4.7 86 54-140 93-179 (450)
25 3jzd_A Iron-containing alcohol 96.6 0.0012 3.9E-08 58.8 3.5 86 53-140 37-123 (358)
26 1rrm_A Lactaldehyde reductase; 96.5 0.002 6.9E-08 57.0 4.7 88 53-140 32-142 (386)
27 2q5c_A NTRC family transcripti 96.4 0.016 5.6E-07 47.2 9.2 126 53-195 5-140 (196)
28 1oj7_A Hypothetical oxidoreduc 96.2 0.0064 2.2E-07 54.4 6.0 84 53-140 51-161 (408)
29 2pju_A Propionate catabolism o 96.2 0.078 2.7E-06 44.5 12.1 128 54-195 14-152 (225)
30 2gru_A 2-deoxy-scyllo-inosose 96.1 0.022 7.5E-07 50.5 9.0 86 53-139 35-129 (368)
31 3l49_A ABC sugar (ribose) tran 96.0 0.34 1.2E-05 38.9 14.9 86 50-137 3-93 (291)
32 3qbe_A 3-dehydroquinate syntha 95.9 0.015 5E-07 52.2 6.9 86 53-139 44-138 (368)
33 3egc_A Putative ribose operon 95.8 0.38 1.3E-05 38.9 14.5 83 51-137 7-94 (291)
34 3m9w_A D-xylose-binding peripl 95.8 0.63 2.2E-05 38.0 16.8 83 53-137 3-90 (313)
35 1xah_A Sadhqs, 3-dehydroquinat 95.7 0.0098 3.4E-07 52.2 4.8 86 53-140 32-126 (354)
36 3iv7_A Alcohol dehydrogenase I 95.7 0.0052 1.8E-07 54.8 3.1 84 53-140 38-122 (364)
37 1ujn_A Dehydroquinate synthase 95.5 0.012 4.2E-07 51.8 4.7 83 53-139 29-119 (348)
38 3kke_A LACI family transcripti 95.4 0.3 1E-05 40.0 12.6 123 52-195 15-155 (303)
39 3dbi_A Sugar-binding transcrip 94.9 0.66 2.3E-05 38.5 13.4 84 51-137 60-150 (338)
40 3o74_A Fructose transport syst 94.8 1.2 4E-05 35.3 14.8 111 52-180 2-117 (272)
41 3h5o_A Transcriptional regulat 94.7 1.1 3.7E-05 37.3 14.2 81 52-136 62-147 (339)
42 3gv0_A Transcriptional regulat 94.5 0.67 2.3E-05 37.5 12.2 83 51-137 7-96 (288)
43 3k4h_A Putative transcriptiona 94.4 0.69 2.4E-05 37.1 12.0 83 51-137 7-99 (292)
44 2o20_A Catabolite control prot 94.4 1.2 4.3E-05 36.8 13.8 82 52-137 63-149 (332)
45 2rjo_A Twin-arginine transloca 94.3 1.6 5.6E-05 36.0 14.4 86 51-138 4-96 (332)
46 1kq3_A Glycerol dehydrogenase; 94.3 0.0041 1.4E-07 55.0 -1.8 85 53-140 42-128 (376)
47 2rgy_A Transcriptional regulat 94.2 1.1 3.7E-05 36.3 12.9 82 52-137 8-97 (290)
48 3clh_A 3-dehydroquinate syntha 94.1 0.016 5.3E-07 50.9 1.6 85 53-139 27-120 (343)
49 3ctp_A Periplasmic binding pro 94.1 1.4 4.8E-05 36.5 13.6 79 52-136 60-141 (330)
50 3miz_A Putative transcriptiona 94.0 0.4 1.4E-05 39.0 9.7 81 51-136 12-98 (301)
51 3l6u_A ABC-type sugar transpor 93.9 2 6.8E-05 34.4 14.3 85 51-137 7-96 (293)
52 1dbq_A Purine repressor; trans 93.9 2 6.8E-05 34.3 14.2 84 52-137 7-94 (289)
53 3k9c_A Transcriptional regulat 93.9 1.2 4.2E-05 36.0 12.5 81 51-137 11-95 (289)
54 3jy6_A Transcriptional regulat 93.9 2 6.9E-05 34.3 13.9 110 51-180 6-120 (276)
55 3bbl_A Regulatory protein of L 93.8 0.9 3.1E-05 36.7 11.5 82 52-137 4-94 (287)
56 3huu_A Transcription regulator 93.7 1 3.4E-05 36.8 11.8 83 51-137 21-113 (305)
57 3c3k_A Alanine racemase; struc 93.7 1.3 4.4E-05 35.7 12.4 81 51-136 7-92 (285)
58 3bil_A Probable LACI-family tr 93.6 0.9 3.1E-05 38.2 11.6 126 52-195 66-208 (348)
59 3o1i_D Periplasmic protein TOR 93.6 1.5 5.2E-05 35.2 12.5 83 52-136 5-93 (304)
60 3qk7_A Transcriptional regulat 93.6 1.3 4.5E-05 35.9 12.2 125 51-195 5-150 (294)
61 3brs_A Periplasmic binding pro 93.5 2.3 7.9E-05 33.9 13.7 85 51-137 4-97 (289)
62 3g1w_A Sugar ABC transporter; 93.5 2.4 8.3E-05 34.1 15.0 85 52-138 4-94 (305)
63 3rf7_A Iron-containing alcohol 93.4 0.053 1.8E-06 48.5 3.8 86 53-141 54-162 (375)
64 2h3h_A Sugar ABC transporter, 93.4 2.7 9.2E-05 34.3 13.9 82 54-137 3-89 (313)
65 2fn9_A Ribose ABC transporter, 93.4 2.5 8.5E-05 33.8 15.6 83 53-137 3-90 (290)
66 2iks_A DNA-binding transcripti 93.1 2.8 9.6E-05 33.7 16.4 127 51-195 19-162 (293)
67 3jvd_A Transcriptional regulat 93.1 1 3.5E-05 37.6 11.1 76 52-136 64-142 (333)
68 3d8u_A PURR transcriptional re 93.1 1.8 6.2E-05 34.3 12.1 81 52-136 3-88 (275)
69 1qpz_A PURA, protein (purine n 92.9 2.8 9.5E-05 34.8 13.5 84 51-136 57-144 (340)
70 3hcw_A Maltose operon transcri 92.8 0.91 3.1E-05 36.9 10.1 82 52-137 7-98 (295)
71 3h75_A Periplasmic sugar-bindi 92.8 3.7 0.00013 34.1 14.3 84 52-138 3-94 (350)
72 3s99_A Basic membrane lipoprot 92.6 2.6 8.9E-05 37.0 13.4 129 52-195 26-172 (356)
73 3rot_A ABC sugar transporter, 92.6 3.5 0.00012 33.3 15.5 84 53-138 4-94 (297)
74 3lft_A Uncharacterized protein 92.6 0.85 2.9E-05 37.3 9.7 83 53-138 3-91 (295)
75 3gbv_A Putative LACI-family tr 92.4 3.4 0.00012 32.9 14.8 88 51-138 7-102 (304)
76 3gyb_A Transcriptional regulat 92.2 1.2 4.2E-05 35.5 10.0 79 51-136 4-85 (280)
77 1mjh_A Protein (ATP-binding do 92.2 0.96 3.3E-05 33.5 8.8 68 69-140 86-161 (162)
78 3e3m_A Transcriptional regulat 91.9 4.9 0.00017 33.6 14.3 81 52-136 70-155 (355)
79 3hs3_A Ribose operon repressor 91.9 3.1 0.00011 33.3 12.2 80 51-137 9-92 (277)
80 3clk_A Transcription regulator 91.9 2.1 7.2E-05 34.4 11.1 83 51-137 7-95 (290)
81 3ksm_A ABC-type sugar transpor 91.8 3.8 0.00013 32.2 13.9 84 54-137 2-91 (276)
82 2vk2_A YTFQ, ABC transporter p 91.8 4.5 0.00015 32.8 13.8 83 53-137 3-90 (306)
83 3kjx_A Transcriptional regulat 91.5 4.5 0.00015 33.6 13.1 81 52-136 68-153 (344)
84 2qh8_A Uncharacterized protein 91.5 1.5 5.1E-05 36.0 10.0 85 50-137 6-97 (302)
85 1jye_A Lactose operon represso 91.2 2.4 8.1E-05 35.6 11.2 108 26-136 26-148 (349)
86 1jx6_A LUXP protein; protein-l 91.1 5.6 0.00019 32.7 14.1 84 52-136 43-134 (342)
87 1tjy_A Sugar transport protein 91.1 2.3 7.7E-05 35.2 10.7 83 53-137 4-92 (316)
88 3d02_A Putative LACI-type tran 91.0 4.9 0.00017 32.2 12.5 83 52-136 4-92 (303)
89 2fqx_A Membrane lipoprotein TM 91.0 6.2 0.00021 33.0 13.9 82 52-136 4-92 (318)
90 2x7x_A Sensor protein; transfe 90.9 5.9 0.0002 32.6 13.8 83 52-137 6-94 (325)
91 1tq8_A Hypothetical protein RV 90.8 2.1 7.2E-05 32.3 9.6 71 66-140 81-160 (163)
92 2dri_A D-ribose-binding protei 90.5 5.6 0.00019 31.6 15.7 82 53-136 2-88 (271)
93 2fep_A Catabolite control prot 90.4 6 0.0002 31.9 14.0 82 52-137 16-102 (289)
94 3brq_A HTH-type transcriptiona 90.4 5.6 0.00019 31.5 13.4 82 52-137 19-108 (296)
95 2qu7_A Putative transcriptiona 90.4 4.6 0.00016 32.3 11.7 79 52-137 8-91 (288)
96 3tb6_A Arabinose metabolism tr 89.6 6.6 0.00023 31.1 13.6 83 53-137 16-106 (298)
97 1f0k_A MURG, UDP-N-acetylgluco 89.5 6.2 0.00021 32.4 12.1 76 108-193 255-333 (364)
98 8abp_A L-arabinose-binding pro 89.3 7.3 0.00025 31.2 13.4 82 53-137 3-89 (306)
99 3loq_A Universal stress protei 89.2 6.6 0.00023 31.9 12.0 73 64-140 212-292 (294)
100 3msz_A Glutaredoxin 1; alpha-b 89.0 0.96 3.3E-05 30.1 5.6 46 54-101 5-50 (89)
101 3idf_A USP-like protein; unive 88.9 1.8 6.2E-05 30.9 7.5 64 68-137 68-138 (138)
102 2qv7_A Diacylglycerol kinase D 88.8 1.9 6.3E-05 37.0 8.7 83 54-140 26-116 (337)
103 2fvy_A D-galactose-binding per 88.7 4.6 0.00016 32.3 10.6 84 53-137 3-91 (309)
104 2dum_A Hypothetical protein PH 88.6 3.3 0.00011 30.8 9.0 69 68-140 80-158 (170)
105 2hsg_A Glucose-resistance amyl 88.4 7.9 0.00027 31.8 12.0 83 51-137 59-146 (332)
106 3uug_A Multiple sugar-binding 88.3 9.1 0.00031 31.1 15.8 85 52-138 3-92 (330)
107 3lkv_A Uncharacterized conserv 88.0 2.3 7.8E-05 35.4 8.5 86 51-138 7-98 (302)
108 3dlo_A Universal stress protei 87.5 3.3 0.00011 31.0 8.4 67 68-136 80-154 (155)
109 3zyw_A Glutaredoxin-3; metal b 87.0 1.9 6.6E-05 31.5 6.7 74 53-153 16-93 (111)
110 3s3t_A Nucleotide-binding prot 86.9 1.7 5.7E-05 31.4 6.2 66 68-137 71-146 (146)
111 2gm3_A Unknown protein; AT3G01 86.8 3.4 0.00011 31.0 8.2 69 68-140 89-165 (175)
112 3ipz_A Monothiol glutaredoxin- 86.1 2.3 7.9E-05 30.6 6.6 74 53-153 18-95 (109)
113 2dgd_A 223AA long hypothetical 85.8 4.7 0.00016 32.4 9.0 79 53-134 109-200 (223)
114 2ioy_A Periplasmic sugar-bindi 85.7 12 0.00041 29.8 16.0 82 53-136 2-88 (283)
115 1byk_A Protein (trehalose oper 85.2 12 0.0004 29.2 11.3 81 52-136 2-85 (255)
116 3fg9_A Protein of universal st 85.0 3.2 0.00011 30.4 7.1 67 68-137 81-156 (156)
117 4fn4_A Short chain dehydrogena 83.5 4.6 0.00016 33.9 8.2 26 52-79 6-31 (254)
118 1aba_A Glutaredoxin; electron 83.3 2.9 0.0001 28.3 5.8 25 64-88 13-37 (87)
119 2h0a_A TTHA0807, transcription 82.9 14 0.00049 28.9 10.6 78 55-136 2-84 (276)
120 1gud_A ALBP, D-allose-binding 82.7 13 0.00045 29.8 10.4 82 53-136 2-90 (288)
121 2l2q_A PTS system, cellobiose- 82.3 5.3 0.00018 29.0 7.2 75 54-139 6-85 (109)
122 3s81_A Putative aspartate race 82.0 4.3 0.00015 34.4 7.5 82 52-137 26-129 (268)
123 2xed_A Putative maleate isomer 81.3 11 0.00039 31.6 9.9 81 53-135 147-238 (273)
124 1efv_B Electron transfer flavo 80.5 13 0.00043 31.5 9.9 79 54-136 61-149 (255)
125 2o6l_A UDP-glucuronosyltransfe 80.2 12 0.0004 27.8 8.7 128 52-195 21-166 (170)
126 3g85_A Transcriptional regulat 80.1 3.9 0.00013 32.7 6.3 84 51-137 10-98 (289)
127 1efp_B ETF, protein (electron 80.1 10 0.00034 31.9 9.1 79 54-136 58-146 (252)
128 3mt0_A Uncharacterized protein 78.9 11 0.00036 30.7 8.7 75 62-139 47-129 (290)
129 3gx8_A Monothiol glutaredoxin- 78.7 4.4 0.00015 30.0 5.8 74 53-153 16-96 (121)
130 2wul_A Glutaredoxin related pr 78.4 7.8 0.00027 29.2 7.1 48 53-103 20-71 (118)
131 1nvm_A HOA, 4-hydroxy-2-oxoval 78.3 4.8 0.00016 35.0 6.8 65 55-120 109-174 (345)
132 3qmx_A Glutaredoxin A, glutare 78.3 12 0.00042 26.3 7.9 35 52-88 15-49 (99)
133 2bon_A Lipid kinase; DAG kinas 78.1 7.9 0.00027 33.1 8.0 84 53-140 30-120 (332)
134 1x60_A Sporulation-specific N- 78.1 12 0.00041 25.2 7.5 61 52-113 7-76 (79)
135 2hqb_A Transcriptional activat 77.9 7.3 0.00025 32.1 7.5 62 52-115 5-71 (296)
136 2z08_A Universal stress protei 77.9 6.7 0.00023 27.9 6.5 65 69-137 60-137 (137)
137 2wem_A Glutaredoxin-related pr 77.8 7 0.00024 28.9 6.7 74 53-153 20-98 (118)
138 3u7r_A NADPH-dependent FMN red 77.7 19 0.00065 28.7 9.7 91 53-145 3-119 (190)
139 3e61_A Putative transcriptiona 77.6 11 0.00037 29.8 8.2 80 52-137 8-93 (277)
140 2yan_A Glutaredoxin-3; oxidore 77.6 6.9 0.00024 27.5 6.3 34 54-87 18-54 (105)
141 1tvm_A PTS system, galactitol- 77.2 11 0.00037 27.7 7.5 71 53-140 22-96 (113)
142 1o97_C Electron transferring f 76.9 13 0.00044 31.4 8.9 80 53-136 58-145 (264)
143 1wik_A Thioredoxin-like protei 75.9 6 0.00021 28.1 5.7 36 53-88 15-53 (109)
144 3dzc_A UDP-N-acetylglucosamine 74.6 5.7 0.0002 34.5 6.2 76 56-136 58-141 (396)
145 3s40_A Diacylglycerol kinase; 74.2 8.8 0.0003 32.4 7.1 83 53-140 9-99 (304)
146 3tnj_A Universal stress protei 73.6 12 0.00041 26.9 6.9 62 74-139 79-148 (150)
147 3olq_A Universal stress protei 73.6 9.6 0.00033 31.1 7.0 67 70-139 77-151 (319)
148 2khp_A Glutaredoxin; thioredox 72.9 18 0.00062 24.1 8.2 47 53-103 6-52 (92)
149 3hgm_A Universal stress protei 72.6 11 0.00036 26.9 6.3 65 67-135 71-146 (147)
150 3loq_A Universal stress protei 72.3 14 0.00047 30.0 7.7 68 68-140 88-164 (294)
151 4g81_D Putative hexonate dehyd 72.2 12 0.00042 31.2 7.5 27 52-80 8-34 (255)
152 3ot5_A UDP-N-acetylglucosamine 72.2 5 0.00017 35.1 5.3 67 71-137 71-145 (403)
153 1e2b_A Enzyme IIB-cellobiose; 71.2 15 0.00051 26.8 6.9 71 54-135 5-80 (106)
154 1f76_A Dihydroorotate dehydrog 71.2 13 0.00046 31.6 7.7 36 79-115 211-246 (336)
155 3cs3_A Sugar-binding transcrip 70.4 37 0.0013 26.7 12.1 119 51-195 7-142 (277)
156 2wci_A Glutaredoxin-4; redox-a 69.6 11 0.00039 28.6 6.2 74 53-153 35-112 (135)
157 1uta_A FTSN, MSGA, cell divisi 69.4 4.6 0.00016 27.7 3.6 63 53-116 8-80 (81)
158 3o8o_A 6-phosphofructokinase s 69.0 3.8 0.00013 40.4 4.1 45 95-139 471-522 (787)
159 1fov_A Glutaredoxin 3, GRX3; a 69.0 20 0.00068 23.0 7.8 39 63-103 9-47 (82)
160 3ab8_A Putative uncharacterize 68.7 32 0.0011 27.2 9.0 67 68-140 76-151 (268)
161 3h8q_A Thioredoxin reductase 3 67.8 14 0.00048 26.4 6.1 75 53-153 17-92 (114)
162 1jmv_A USPA, universal stress 67.6 27 0.00092 24.6 7.6 63 72-139 70-139 (141)
163 2pjk_A 178AA long hypothetical 67.3 43 0.0015 26.4 9.4 77 52-130 15-108 (178)
164 3fdx_A Putative filament prote 67.0 16 0.00054 25.9 6.2 63 70-137 70-143 (143)
165 4a3s_A 6-phosphofructokinase; 66.7 4.2 0.00015 35.6 3.6 46 94-139 80-125 (319)
166 3opy_A 6-phosphofructo-1-kinas 66.6 4.1 0.00014 41.2 3.8 45 94-139 675-727 (989)
167 3ixl_A Amdase, arylmalonate de 66.4 53 0.0018 26.9 10.5 81 52-135 117-210 (240)
168 1q77_A Hypothetical protein AQ 65.8 16 0.00056 25.8 6.1 52 81-137 87-138 (138)
169 3s2u_A UDP-N-acetylglucosamine 65.5 62 0.0021 27.4 10.9 77 108-192 253-333 (365)
170 1pfk_A Phosphofructokinase; tr 65.3 4.6 0.00016 35.5 3.5 46 93-139 80-126 (320)
171 3nrc_A Enoyl-[acyl-carrier-pro 65.0 24 0.00082 28.6 7.7 67 51-119 24-115 (280)
172 1zxx_A 6-phosphofructokinase; 64.9 5 0.00017 35.3 3.7 46 93-139 79-125 (319)
173 3ic4_A Glutaredoxin (GRX-1); s 64.6 12 0.00042 25.0 5.0 32 54-87 13-44 (92)
174 2klx_A Glutaredoxin; thioredox 64.1 15 0.00051 24.5 5.3 31 53-85 6-36 (89)
175 3opy_B 6-phosphofructo-1-kinas 63.9 6.3 0.00021 39.7 4.5 44 95-139 650-701 (941)
176 1nyt_A Shikimate 5-dehydrogena 63.8 30 0.001 28.4 8.2 60 52-118 118-191 (271)
177 3pgx_A Carveol dehydrogenase; 63.6 45 0.0015 26.9 9.1 27 52-80 14-40 (280)
178 2pbq_A Molybdenum cofactor bio 63.2 46 0.0016 26.1 8.8 68 50-120 3-81 (178)
179 3czc_A RMPB; alpha/beta sandwi 62.5 13 0.00044 27.0 5.0 73 53-138 19-94 (110)
180 2qjg_A Putative aldolase MJ040 62.5 60 0.002 26.3 9.7 80 56-137 119-209 (273)
181 3iwt_A 178AA long hypothetical 62.2 45 0.0016 25.7 8.5 66 52-120 15-94 (178)
182 3cis_A Uncharacterized protein 61.5 35 0.0012 27.8 8.1 67 68-140 84-163 (309)
183 3h7a_A Short chain dehydrogena 61.4 36 0.0012 27.2 8.0 27 52-80 6-32 (252)
184 3mt0_A Uncharacterized protein 61.0 24 0.00081 28.5 6.9 65 71-139 204-277 (290)
185 3r5x_A D-alanine--D-alanine li 60.8 7.1 0.00024 32.0 3.7 79 53-140 4-91 (307)
186 2hqb_A Transcriptional activat 60.6 57 0.0019 26.6 9.3 82 52-136 126-210 (296)
187 2fvy_A D-galactose-binding per 60.3 31 0.0011 27.3 7.4 115 54-179 142-269 (309)
188 3gi1_A LBP, laminin-binding pr 60.2 43 0.0015 28.2 8.6 124 7-140 121-262 (286)
189 1usg_A Leucine-specific bindin 59.7 37 0.0013 27.3 7.9 83 54-136 4-99 (346)
190 2nx9_A Oxaloacetate decarboxyl 59.4 23 0.0008 32.5 7.2 59 54-112 115-176 (464)
191 2an1_A Putative kinase; struct 58.9 23 0.00077 29.4 6.6 81 53-138 6-95 (292)
192 3sr3_A Microcin immunity prote 58.9 36 0.0012 29.6 8.1 79 54-136 15-114 (336)
193 4f2d_A L-arabinose isomerase; 58.8 72 0.0025 29.4 10.5 85 53-137 7-104 (500)
194 3ab8_A Putative uncharacterize 58.8 54 0.0019 25.8 8.6 14 67-80 170-183 (268)
195 3ipc_A ABC transporter, substr 58.6 70 0.0024 25.9 9.4 58 78-135 40-98 (356)
196 3olq_A Universal stress protei 58.6 47 0.0016 26.9 8.3 67 70-140 232-307 (319)
197 1v95_A Nuclear receptor coacti 58.5 26 0.00089 27.0 6.3 61 54-117 10-70 (130)
198 4eg0_A D-alanine--D-alanine li 58.5 11 0.00036 31.5 4.5 79 52-140 13-101 (317)
199 3nzn_A Glutaredoxin; structura 58.5 34 0.0012 23.6 6.6 34 52-87 21-54 (103)
200 1nvt_A Shikimate 5'-dehydrogen 58.3 27 0.00094 28.9 7.0 60 52-119 127-205 (287)
201 1mkz_A Molybdenum cofactor bio 58.1 64 0.0022 25.1 9.4 78 52-132 10-98 (172)
202 1ejb_A Lumazine synthase; anal 57.9 43 0.0015 26.9 7.8 122 53-181 17-162 (168)
203 3ucx_A Short chain dehydrogena 57.6 41 0.0014 27.0 7.8 26 53-80 11-36 (264)
204 3hut_A Putative branched-chain 57.5 46 0.0016 27.0 8.2 84 53-136 5-102 (358)
205 3tjr_A Short chain dehydrogena 57.4 52 0.0018 27.1 8.6 27 52-80 30-56 (301)
206 4hwg_A UDP-N-acetylglucosamine 57.3 25 0.00086 30.6 6.8 78 54-137 38-124 (385)
207 3qvl_A Putative hydantoin race 57.0 40 0.0014 27.9 7.7 80 54-136 3-97 (245)
208 3oti_A CALG3; calicheamicin, T 56.9 36 0.0012 28.5 7.6 123 52-195 232-377 (398)
209 3otg_A CALG1; calicheamicin, T 56.7 32 0.0011 28.6 7.2 126 51-194 241-387 (412)
210 3ahc_A Phosphoketolase, xylulo 56.7 43 0.0015 33.3 9.0 123 53-194 660-801 (845)
211 4fs3_A Enoyl-[acyl-carrier-pro 56.1 26 0.0009 28.3 6.4 49 52-104 5-53 (256)
212 3ia7_A CALG4; glycosysltransfe 56.0 24 0.00081 29.2 6.2 126 52-194 231-377 (402)
213 1di6_A MOGA, molybdenum cofact 55.8 60 0.0021 26.1 8.4 76 53-128 4-91 (195)
214 3fst_A 5,10-methylenetetrahydr 55.5 40 0.0014 29.1 7.8 51 67-117 70-120 (304)
215 4h1h_A LMO1638 protein; MCCF-l 55.3 29 0.00098 29.9 6.8 81 54-136 14-113 (327)
216 1zl0_A Hypothetical protein PA 54.8 40 0.0014 29.2 7.6 82 54-136 19-116 (311)
217 3gr7_A NADPH dehydrogenase; fl 54.8 48 0.0016 28.7 8.2 41 77-117 207-252 (340)
218 1vkr_A Mannitol-specific PTS s 54.7 19 0.00065 27.0 4.9 71 53-139 14-88 (125)
219 4da9_A Short-chain dehydrogena 54.7 85 0.0029 25.5 9.4 26 53-80 29-54 (280)
220 3sju_A Keto reductase; short-c 54.6 40 0.0014 27.4 7.3 26 53-80 24-49 (279)
221 1pea_A Amidase operon; gene re 54.5 65 0.0022 26.7 8.7 84 52-136 7-105 (385)
222 2jfq_A Glutamate racemase; cel 54.3 4.1 0.00014 34.6 1.2 81 53-137 23-115 (286)
223 3rsc_A CALG2; TDP, enediyne, s 54.3 94 0.0032 25.9 10.9 126 52-195 247-393 (415)
224 3v8b_A Putative dehydrogenase, 53.2 55 0.0019 26.7 8.0 45 52-102 27-71 (283)
225 2q62_A ARSH; alpha/beta, flavo 53.1 78 0.0027 26.1 8.9 84 53-140 35-146 (247)
226 2x8g_A Thioredoxin glutathione 53.0 50 0.0017 29.9 8.4 31 53-85 18-48 (598)
227 3rfq_A Pterin-4-alpha-carbinol 52.7 34 0.0012 27.5 6.4 77 51-129 29-115 (185)
228 3h5t_A Transcriptional regulat 52.7 97 0.0033 25.5 11.1 82 52-136 68-157 (366)
229 2fqx_A Membrane lipoprotein TM 52.5 98 0.0033 25.5 9.9 65 54-118 131-199 (318)
230 3rkr_A Short chain oxidoreduct 52.5 66 0.0023 25.6 8.2 26 53-80 29-54 (262)
231 2qh8_A Uncharacterized protein 52.2 58 0.002 26.3 7.9 112 51-180 139-259 (302)
232 2bd0_A Sepiapterin reductase; 52.1 70 0.0024 24.7 8.1 26 93-118 70-97 (244)
233 3pk0_A Short-chain dehydrogena 52.1 58 0.002 26.1 7.8 27 52-80 9-35 (262)
234 3qiv_A Short-chain dehydrogena 52.1 75 0.0026 24.9 8.4 26 53-80 9-34 (253)
235 4a26_A Putative C-1-tetrahydro 52.1 30 0.001 30.2 6.4 54 53-106 39-93 (300)
236 3o8o_B 6-phosphofructokinase s 52.0 9.9 0.00034 37.4 3.6 44 95-139 472-523 (766)
237 3r1i_A Short-chain type dehydr 51.7 47 0.0016 27.0 7.3 27 52-80 31-57 (276)
238 4eys_A MCCC family protein; MC 51.6 72 0.0025 27.8 8.8 67 53-120 6-86 (346)
239 1jeo_A MJ1247, hypothetical pr 51.5 67 0.0023 24.0 7.7 77 56-138 43-134 (180)
240 1m3s_A Hypothetical protein YC 51.5 75 0.0026 23.9 8.3 80 54-140 39-134 (186)
241 1uuy_A CNX1, molybdopterin bio 51.4 32 0.0011 26.6 5.9 80 50-132 3-100 (167)
242 4eso_A Putative oxidoreductase 51.1 75 0.0026 25.3 8.3 27 52-80 7-33 (255)
243 2cw6_A Hydroxymethylglutaryl-C 50.9 43 0.0015 28.2 7.1 58 53-111 95-173 (298)
244 3grk_A Enoyl-(acyl-carrier-pro 50.7 58 0.002 26.7 7.8 66 52-119 30-121 (293)
245 3tla_A MCCF; serine protease, 50.7 25 0.00085 31.2 5.8 81 54-136 45-144 (371)
246 3l4n_A Monothiol glutaredoxin- 50.7 30 0.001 25.8 5.4 75 53-153 14-92 (127)
247 3pxx_A Carveol dehydrogenase; 50.6 93 0.0032 24.7 9.3 27 52-80 9-35 (287)
248 3tox_A Short chain dehydrogena 50.5 59 0.002 26.5 7.7 43 52-100 7-49 (280)
249 1iir_A Glycosyltransferase GTF 50.5 1.1E+02 0.0039 25.7 10.3 125 52-194 238-379 (415)
250 3op4_A 3-oxoacyl-[acyl-carrier 50.3 63 0.0022 25.6 7.7 27 52-80 8-34 (248)
251 2jah_A Clavulanic acid dehydro 50.2 77 0.0026 25.0 8.2 26 93-118 68-95 (247)
252 4fe7_A Xylose operon regulator 49.9 54 0.0018 28.0 7.7 108 51-180 24-136 (412)
253 3nyw_A Putative oxidoreductase 49.7 62 0.0021 25.7 7.6 43 52-100 6-48 (250)
254 3l07_A Bifunctional protein fo 49.7 34 0.0012 29.6 6.3 54 53-106 36-90 (285)
255 4hoj_A REGF protein; GST, glut 49.5 22 0.00077 27.1 4.7 32 66-97 13-44 (210)
256 3hno_A Pyrophosphate-dependent 49.3 11 0.00038 34.3 3.3 49 91-139 88-142 (419)
257 4ibo_A Gluconate dehydrogenase 49.2 59 0.002 26.4 7.5 27 52-80 25-51 (271)
258 4fgs_A Probable dehydrogenase 49.1 41 0.0014 28.3 6.7 64 52-118 28-114 (273)
259 3t7c_A Carveol dehydrogenase; 48.9 93 0.0032 25.4 8.8 27 52-80 27-53 (299)
260 2rhc_B Actinorhodin polyketide 48.8 91 0.0031 25.1 8.6 26 53-80 22-47 (277)
261 1rqb_A Transcarboxylase 5S sub 48.8 68 0.0023 30.1 8.6 59 54-112 132-193 (539)
262 4a5o_A Bifunctional protein fo 48.6 37 0.0013 29.4 6.4 54 53-106 37-91 (286)
263 3uve_A Carveol dehydrogenase ( 48.6 96 0.0033 24.9 8.7 28 52-81 10-37 (286)
264 3uhf_A Glutamate racemase; str 48.5 5 0.00017 34.4 0.8 89 45-137 17-117 (274)
265 2h3h_A Sugar ABC transporter, 48.3 67 0.0023 25.8 7.6 119 51-179 122-249 (313)
266 3tfo_A Putative 3-oxoacyl-(acy 48.3 70 0.0024 26.0 7.8 26 93-118 65-92 (264)
267 2ftp_A Hydroxymethylglutaryl-C 48.1 51 0.0017 27.8 7.1 46 66-111 124-176 (302)
268 3imf_A Short chain dehydrogena 48.1 55 0.0019 26.1 7.0 26 53-80 6-31 (257)
269 3ftp_A 3-oxoacyl-[acyl-carrier 47.9 43 0.0015 27.2 6.5 26 53-80 28-53 (270)
270 4e5s_A MCCFLIKE protein (BA_56 47.9 31 0.0011 30.0 5.8 66 54-120 14-91 (331)
271 3p2o_A Bifunctional protein fo 47.7 41 0.0014 29.1 6.5 54 53-106 35-89 (285)
272 1g2h_A Transcriptional regulat 47.5 9.3 0.00032 25.0 1.9 21 174-194 38-58 (61)
273 3ble_A Citramalate synthase fr 47.5 24 0.00081 30.6 5.0 57 55-111 112-186 (337)
274 2b99_A Riboflavin synthase; lu 47.4 57 0.002 25.9 6.9 114 53-181 3-132 (156)
275 3oec_A Carveol dehydrogenase ( 47.4 93 0.0032 25.8 8.6 27 52-80 45-71 (317)
276 3ngx_A Bifunctional protein fo 47.0 45 0.0015 28.8 6.6 53 53-106 29-82 (276)
277 2fzv_A Putative arsenical resi 47.0 1.3E+02 0.0045 25.5 10.2 85 52-140 58-171 (279)
278 1jfl_A Aspartate racemase; alp 46.5 33 0.0011 27.4 5.5 79 54-136 3-103 (228)
279 1zem_A Xylitol dehydrogenase; 46.4 74 0.0025 25.3 7.6 26 53-80 7-32 (262)
280 1ae1_A Tropinone reductase-I; 46.4 92 0.0031 25.0 8.2 26 53-80 21-46 (273)
281 3qel_B Glutamate [NMDA] recept 46.3 50 0.0017 28.0 6.9 84 54-137 6-97 (364)
282 3uxy_A Short-chain dehydrogena 46.1 86 0.0029 25.3 8.0 64 52-119 27-106 (266)
283 3gaf_A 7-alpha-hydroxysteroid 46.0 81 0.0028 25.1 7.8 26 53-80 12-37 (256)
284 3uce_A Dehydrogenase; rossmann 45.9 89 0.003 24.1 7.8 61 52-118 5-70 (223)
285 3rd5_A Mypaa.01249.C; ssgcid, 45.8 80 0.0027 25.5 7.8 27 52-80 15-41 (291)
286 4fc7_A Peroxisomal 2,4-dienoyl 45.8 69 0.0024 25.8 7.4 27 52-80 26-52 (277)
287 3cx3_A Lipoprotein; zinc-bindi 45.7 1E+02 0.0035 25.6 8.6 126 6-140 118-259 (284)
288 2f48_A Diphosphate--fructose-6 45.6 13 0.00044 35.1 3.2 47 93-139 152-204 (555)
289 2wte_A CSA3; antiviral protein 45.4 1.1E+02 0.0037 25.3 8.6 75 53-128 35-116 (244)
290 3tov_A Glycosyl transferase fa 45.3 14 0.00049 31.5 3.2 29 108-140 262-290 (349)
291 1nm3_A Protein HI0572; hybrid, 45.3 29 0.001 27.4 4.9 35 54-90 171-205 (241)
292 2ct6_A SH3 domain-binding glut 45.2 33 0.0011 24.4 4.8 79 54-153 9-94 (111)
293 4dyv_A Short-chain dehydrogena 45.1 72 0.0025 25.9 7.4 61 52-118 27-113 (272)
294 1ooe_A Dihydropteridine reduct 45.0 1.1E+02 0.0036 23.8 8.4 62 53-118 3-83 (236)
295 3egl_A DEGV family protein; al 44.9 1.4E+02 0.0048 25.1 9.9 45 54-103 5-57 (277)
296 1u0t_A Inorganic polyphosphate 44.8 20 0.0007 30.4 4.1 85 53-138 5-107 (307)
297 2q5c_A NTRC family transcripti 44.8 42 0.0014 26.7 5.8 71 52-134 94-164 (196)
298 2zat_A Dehydrogenase/reductase 44.7 87 0.003 24.7 7.7 26 53-80 14-39 (260)
299 2pd4_A Enoyl-[acyl-carrier-pro 44.7 71 0.0024 25.6 7.3 65 53-119 6-96 (275)
300 4gqr_A Pancreatic alpha-amylas 44.4 8.6 0.00029 33.3 1.7 29 85-113 68-96 (496)
301 3tpc_A Short chain alcohol deh 44.3 1.1E+02 0.0037 24.1 8.2 63 52-118 6-92 (257)
302 4imr_A 3-oxoacyl-(acyl-carrier 44.2 61 0.0021 26.3 6.8 27 52-80 32-58 (275)
303 1e7w_A Pteridine reductase; di 44.1 82 0.0028 25.6 7.6 56 52-112 8-64 (291)
304 3ju3_A Probable 2-oxoacid ferr 44.1 29 0.001 25.4 4.4 71 54-131 15-89 (118)
305 3rhb_A ATGRXC5, glutaredoxin-C 44.1 33 0.0011 23.9 4.6 34 54-89 20-53 (113)
306 2ae2_A Protein (tropinone redu 43.9 1.2E+02 0.004 24.0 8.4 26 53-80 9-34 (260)
307 3e03_A Short chain dehydrogena 43.8 1.1E+02 0.0038 24.5 8.3 27 52-80 5-31 (274)
308 2qq5_A DHRS1, dehydrogenase/re 43.7 93 0.0032 24.6 7.7 24 93-116 66-92 (260)
309 2pju_A Propionate catabolism o 43.6 43 0.0015 27.6 5.8 72 52-135 106-177 (225)
310 2lqo_A Putative glutaredoxin R 43.6 30 0.001 24.4 4.2 43 54-100 5-47 (92)
311 3p6l_A Sugar phosphate isomera 43.6 89 0.003 24.5 7.6 53 64-116 61-113 (262)
312 3kbq_A Protein TA0487; structu 43.5 1.2E+02 0.0041 24.0 9.1 112 52-171 3-134 (172)
313 3kl9_A PEPA, glutamyl aminopep 43.4 76 0.0026 27.6 7.7 48 129-191 306-353 (355)
314 3sx2_A Putative 3-ketoacyl-(ac 43.4 1.2E+02 0.004 24.2 8.4 26 53-80 13-38 (278)
315 1xkq_A Short-chain reductase f 43.3 87 0.003 25.1 7.6 12 107-118 86-97 (280)
316 3lyl_A 3-oxoacyl-(acyl-carrier 42.9 98 0.0034 24.0 7.7 27 92-118 65-93 (247)
317 3td9_A Branched chain amino ac 42.9 63 0.0022 26.4 6.7 83 52-137 149-237 (366)
318 1rrv_A Glycosyltransferase GTF 42.8 1.5E+02 0.0052 24.9 9.4 127 52-195 237-381 (416)
319 1yo6_A Putative carbonyl reduc 42.7 1.1E+02 0.0038 23.3 7.9 65 53-119 3-93 (250)
320 3lkv_A Uncharacterized conserv 42.6 1.4E+02 0.0047 24.4 11.0 114 52-183 140-262 (302)
321 3un1_A Probable oxidoreductase 42.6 1E+02 0.0034 24.7 7.8 63 52-118 27-107 (260)
322 3gdg_A Probable NADP-dependent 42.4 69 0.0024 25.3 6.7 29 52-80 19-47 (267)
323 3oig_A Enoyl-[acyl-carrier-pro 42.3 1E+02 0.0035 24.3 7.8 66 52-119 6-99 (266)
324 2dwu_A Glutamate racemase; iso 42.2 8.3 0.00028 32.4 1.2 81 53-136 8-99 (276)
325 2c2x_A Methylenetetrahydrofola 42.2 53 0.0018 28.4 6.3 54 53-106 34-88 (281)
326 2dtx_A Glucose 1-dehydrogenase 42.2 1.2E+02 0.0042 24.1 8.4 63 52-118 7-85 (264)
327 2i2c_A Probable inorganic poly 42.1 17 0.00058 30.3 3.1 63 54-138 2-69 (272)
328 4dry_A 3-oxoacyl-[acyl-carrier 42.0 43 0.0015 27.3 5.6 43 52-100 32-74 (281)
329 2vzf_A NADH-dependent FMN redu 41.9 99 0.0034 23.7 7.5 81 54-138 4-110 (197)
330 3u5t_A 3-oxoacyl-[acyl-carrier 41.9 1.2E+02 0.0042 24.3 8.4 26 53-80 27-52 (267)
331 3t4x_A Oxidoreductase, short c 41.9 82 0.0028 25.2 7.2 26 53-80 10-35 (267)
332 1f0k_A MURG, UDP-N-acetylgluco 41.7 93 0.0032 25.2 7.6 40 98-137 87-126 (364)
333 1rvv_A Riboflavin synthase; tr 41.6 80 0.0027 24.9 6.8 117 52-181 12-149 (154)
334 3lt0_A Enoyl-ACP reductase; tr 41.5 69 0.0024 26.7 6.9 30 53-82 2-31 (329)
335 4hi7_A GI20122; GST, glutathio 41.3 40 0.0014 26.0 5.1 37 65-101 12-48 (228)
336 4b4u_A Bifunctional protein fo 41.3 79 0.0027 27.6 7.4 54 53-106 55-109 (303)
337 4e3z_A Putative oxidoreductase 41.2 1.1E+02 0.0038 24.3 7.9 26 53-80 26-51 (272)
338 3o74_A Fructose transport syst 41.2 1.2E+02 0.004 23.4 7.8 124 46-179 114-245 (272)
339 1zuw_A Glutamate racemase 1; ( 41.0 10 0.00036 31.7 1.6 80 54-136 5-96 (272)
340 1fui_A L-fucose isomerase; ket 40.8 2.4E+02 0.0081 26.7 11.1 111 52-163 6-138 (591)
341 3o26_A Salutaridine reductase; 40.7 96 0.0033 24.6 7.4 27 52-80 11-37 (311)
342 2kpo_A Rossmann 2X2 fold prote 40.5 96 0.0033 22.7 6.6 49 63-116 10-60 (110)
343 1geg_A Acetoin reductase; SDR 40.4 1.3E+02 0.0044 23.7 8.1 26 93-118 63-90 (256)
344 2c07_A 3-oxoacyl-(acyl-carrier 40.4 97 0.0033 24.9 7.5 27 92-118 104-132 (285)
345 1xq1_A Putative tropinone redu 40.2 1.1E+02 0.0037 24.1 7.6 12 107-118 92-103 (266)
346 3rih_A Short chain dehydrogena 40.2 97 0.0033 25.5 7.5 47 50-102 38-84 (293)
347 4dqx_A Probable oxidoreductase 40.1 1.1E+02 0.0037 24.8 7.7 27 52-80 26-52 (277)
348 3r3s_A Oxidoreductase; structu 40.1 1.1E+02 0.0038 24.9 7.9 27 52-80 48-74 (294)
349 3grp_A 3-oxoacyl-(acyl carrier 40.0 1E+02 0.0035 24.8 7.6 27 52-80 26-52 (266)
350 1uzm_A 3-oxoacyl-[acyl-carrier 39.8 1.4E+02 0.0046 23.5 8.3 63 52-118 14-92 (247)
351 3e7l_A Transcriptional regulat 39.7 15 0.00051 24.0 1.9 21 174-194 37-57 (63)
352 1a4i_A Methylenetetrahydrofola 39.7 70 0.0024 27.9 6.7 55 53-107 37-92 (301)
353 3tsc_A Putative oxidoreductase 39.6 1.3E+02 0.0046 23.9 8.2 27 52-80 10-36 (277)
354 3v2h_A D-beta-hydroxybutyrate 39.3 1.4E+02 0.0049 24.1 8.4 27 52-80 24-50 (281)
355 3is3_A 17BETA-hydroxysteroid d 39.1 1.4E+02 0.0049 23.8 8.2 27 92-118 79-107 (270)
356 1vgv_A UDP-N-acetylglucosamine 39.0 78 0.0027 25.8 6.7 41 97-137 76-117 (384)
357 3kvo_A Hydroxysteroid dehydrog 39.0 1.1E+02 0.0036 26.1 7.8 27 52-80 44-70 (346)
358 3svt_A Short-chain type dehydr 38.9 1.4E+02 0.0048 23.9 8.2 26 53-80 11-36 (281)
359 4e6p_A Probable sorbitol dehyd 38.9 1.4E+02 0.0047 23.6 8.0 63 52-118 7-93 (259)
360 4b79_A PA4098, probable short- 38.8 1.4E+02 0.0049 24.5 8.4 61 52-118 10-89 (242)
361 1ydo_A HMG-COA lyase; TIM-barr 38.7 85 0.0029 26.8 7.1 58 53-111 96-174 (307)
362 1efp_A ETF, protein (electron 38.5 61 0.0021 27.9 6.2 80 53-138 30-114 (307)
363 3v2g_A 3-oxoacyl-[acyl-carrier 38.5 1.4E+02 0.0049 24.0 8.2 27 52-80 30-56 (271)
364 2oho_A Glutamate racemase; iso 38.4 9.8 0.00034 31.8 1.1 89 45-137 7-105 (273)
365 2kok_A Arsenate reductase; bru 38.3 27 0.00092 25.4 3.4 39 63-101 13-52 (120)
366 4g85_A Histidine-tRNA ligase, 38.3 1.2E+02 0.004 27.4 8.4 58 53-114 420-477 (517)
367 3l77_A Short-chain alcohol deh 38.2 1.2E+02 0.004 23.4 7.4 25 54-80 3-27 (235)
368 3fxa_A SIS domain protein; str 38.2 1.2E+02 0.004 23.2 7.3 57 54-111 47-123 (201)
369 3i1j_A Oxidoreductase, short c 38.1 80 0.0027 24.5 6.4 26 53-80 14-39 (247)
370 3gkx_A Putative ARSC family re 38.1 33 0.0011 25.3 3.9 41 63-103 12-53 (120)
371 2vsy_A XCC0866; transferase, g 37.9 1.6E+02 0.0055 25.7 9.0 21 171-191 509-530 (568)
372 2cq9_A GLRX2 protein, glutared 37.9 55 0.0019 23.8 5.1 34 54-89 28-61 (130)
373 3k6v_A Solute-binding protein 37.8 2E+02 0.0069 24.9 9.8 125 56-191 45-190 (354)
374 3p19_A BFPVVD8, putative blue 37.8 1.3E+02 0.0043 24.2 7.8 63 52-118 15-98 (266)
375 4h15_A Short chain alcohol deh 37.8 1.5E+02 0.0051 24.3 8.3 64 52-119 10-90 (261)
376 1t1v_A SH3BGRL3, SH3 domain-bi 37.8 40 0.0014 22.8 4.1 73 54-153 3-82 (93)
377 1xp2_A EAD500, PLY500, L-alany 37.7 23 0.00078 28.9 3.1 55 68-124 41-96 (179)
378 3f1l_A Uncharacterized oxidore 37.7 87 0.003 24.8 6.7 27 52-80 11-37 (252)
379 1ydn_A Hydroxymethylglutaryl-C 37.6 73 0.0025 26.5 6.4 48 64-111 118-172 (295)
380 1nff_A Putative oxidoreductase 37.5 1.3E+02 0.0045 23.9 7.8 27 52-80 6-32 (260)
381 1vl8_A Gluconate 5-dehydrogena 37.5 1.5E+02 0.0051 23.7 8.1 27 52-80 20-46 (267)
382 3f0i_A Arsenate reductase; str 37.4 27 0.00091 25.8 3.2 41 63-103 12-53 (119)
383 1u6t_A SH3 domain-binding glut 37.3 77 0.0026 23.8 5.9 35 67-103 18-52 (121)
384 1p77_A Shikimate 5-dehydrogena 37.3 1.1E+02 0.0037 25.1 7.3 59 53-118 119-191 (272)
385 3fz4_A Putative arsenate reduc 37.1 36 0.0012 25.0 4.0 40 63-102 11-51 (120)
386 2ztj_A Homocitrate synthase; ( 37.1 88 0.003 27.5 7.1 56 55-111 90-161 (382)
387 3orf_A Dihydropteridine reduct 37.0 1.5E+02 0.0052 23.3 8.1 62 53-118 22-98 (251)
388 1yb1_A 17-beta-hydroxysteroid 37.0 1.4E+02 0.0046 23.8 7.8 26 53-80 31-56 (272)
389 1kte_A Thioltransferase; redox 36.9 89 0.0031 20.9 5.8 30 54-85 13-45 (105)
390 3nq4_A 6,7-dimethyl-8-ribityll 36.9 1.3E+02 0.0046 23.7 7.5 117 52-181 12-150 (156)
391 3tzq_B Short-chain type dehydr 36.7 1.6E+02 0.0055 23.5 8.5 63 52-118 10-96 (271)
392 1rtt_A Conserved hypothetical 36.7 1.3E+02 0.0044 22.8 7.3 87 53-141 7-119 (193)
393 4eyg_A Twin-arginine transloca 36.7 1.3E+02 0.0045 24.3 7.7 81 53-135 140-228 (368)
394 2vo9_A EAD500, L-alanyl-D-glut 36.6 21 0.00071 28.6 2.7 55 69-125 42-97 (179)
395 2fwm_X 2,3-dihydro-2,3-dihydro 36.5 1.5E+02 0.0053 23.2 8.4 63 52-118 6-85 (250)
396 3vk9_A Glutathione S-transfera 36.5 48 0.0017 25.4 4.8 36 66-101 12-47 (216)
397 1hqk_A 6,7-dimethyl-8-ribityll 36.5 83 0.0028 24.8 6.2 117 52-181 12-149 (154)
398 3osu_A 3-oxoacyl-[acyl-carrier 36.5 1.4E+02 0.0046 23.4 7.6 53 65-118 39-93 (246)
399 3a28_C L-2.3-butanediol dehydr 36.4 1.5E+02 0.005 23.4 7.8 26 93-118 65-92 (258)
400 3ai3_A NADPH-sorbose reductase 36.4 1.4E+02 0.0049 23.4 7.8 26 93-118 69-96 (263)
401 4gpa_A Glutamate receptor 4; P 36.2 1.3E+02 0.0043 24.4 7.6 65 53-118 131-195 (389)
402 1umq_A Photosynthetic apparatu 36.2 13 0.00045 26.3 1.3 21 174-194 59-79 (81)
403 3rdw_A Putative arsenate reduc 36.1 30 0.001 25.5 3.4 40 63-102 13-53 (121)
404 1y7o_A ATP-dependent CLP prote 36.0 1.7E+02 0.0058 23.6 8.7 78 53-131 45-127 (218)
405 3b0p_A TRNA-dihydrouridine syn 36.0 2E+02 0.0069 24.7 9.2 62 54-115 86-165 (350)
406 3zwt_A Dihydroorotate dehydrog 35.9 1.1E+02 0.0039 26.8 7.7 50 64-114 197-254 (367)
407 4dmm_A 3-oxoacyl-[acyl-carrier 35.8 1.3E+02 0.0045 24.1 7.6 26 53-80 28-53 (269)
408 1jub_A Dihydroorotate dehydrog 35.8 1.2E+02 0.0041 25.1 7.5 58 53-112 95-163 (311)
409 1rw1_A Conserved hypothetical 35.8 32 0.0011 24.8 3.4 40 63-102 8-48 (114)
410 3cxt_A Dehydrogenase with diff 35.7 1.3E+02 0.0044 24.6 7.6 26 53-80 34-59 (291)
411 2nm0_A Probable 3-oxacyl-(acyl 35.6 1.7E+02 0.0057 23.3 8.4 62 53-118 21-98 (253)
412 2wm8_A MDP-1, magnesium-depend 35.6 1.3E+02 0.0043 22.4 7.0 78 53-138 85-165 (187)
413 1ntc_A Protein (nitrogen regul 35.5 20 0.00068 25.1 2.2 22 174-195 69-90 (91)
414 3n74_A 3-ketoacyl-(acyl-carrie 35.4 1.4E+02 0.0048 23.4 7.5 60 53-118 9-94 (261)
415 1z3e_A Regulatory protein SPX; 35.3 56 0.0019 24.1 4.8 39 63-101 9-48 (132)
416 1dhr_A Dihydropteridine reduct 35.3 1.5E+02 0.0051 23.1 7.6 63 52-118 6-87 (241)
417 1r7h_A NRDH-redoxin; thioredox 35.2 79 0.0027 19.5 5.7 22 64-85 10-31 (75)
418 2hig_A 6-phospho-1-fructokinas 35.2 18 0.0006 33.8 2.3 49 91-139 173-227 (487)
419 3f6d_A Adgstd4-4, glutathione 35.2 59 0.002 24.6 5.1 28 65-92 9-36 (219)
420 1y5e_A Molybdenum cofactor bio 35.1 1.5E+02 0.0052 22.7 9.8 74 52-128 13-97 (169)
421 1eto_A FIS, factor for inversi 35.0 18 0.00062 26.2 1.9 21 174-194 76-96 (98)
422 3can_A Pyruvate-formate lyase- 35.0 1.4E+02 0.0048 22.3 7.8 50 63-112 107-180 (182)
423 3f9i_A 3-oxoacyl-[acyl-carrier 34.9 1.1E+02 0.0039 23.7 6.8 44 52-101 13-56 (249)
424 3out_A Glutamate racemase; str 34.9 16 0.00053 30.9 1.8 80 53-136 8-100 (268)
425 1iy8_A Levodione reductase; ox 34.8 1.5E+02 0.0052 23.4 7.7 26 93-118 76-103 (267)
426 3kzv_A Uncharacterized oxidore 34.8 1.7E+02 0.0057 23.1 8.5 26 93-118 62-89 (254)
427 4hs4_A Chromate reductase; tri 34.8 1.3E+02 0.0045 23.6 7.2 91 53-145 7-124 (199)
428 3l6u_A ABC-type sugar transpor 34.7 74 0.0025 24.9 5.7 113 54-178 137-260 (293)
429 3oid_A Enoyl-[acyl-carrier-pro 34.7 1.6E+02 0.0055 23.4 7.8 26 92-117 65-92 (258)
430 3bby_A Uncharacterized GST-lik 34.5 52 0.0018 25.0 4.6 27 64-90 16-42 (215)
431 4egf_A L-xylulose reductase; s 34.5 1.4E+02 0.0049 23.8 7.5 26 93-118 82-109 (266)
432 2vvt_A Glutamate racemase; iso 34.4 7.7 0.00026 32.9 -0.2 81 54-137 26-117 (290)
433 2uvd_A 3-oxoacyl-(acyl-carrier 34.4 1.5E+02 0.0052 23.1 7.6 53 65-118 39-93 (246)
434 2cfc_A 2-(R)-hydroxypropyl-COM 34.4 1.6E+02 0.0054 22.7 7.9 25 94-118 65-91 (250)
435 2prs_A High-affinity zinc upta 34.1 88 0.003 26.0 6.3 61 75-136 188-252 (284)
436 3g23_A Peptidase U61, LD-carbo 34.1 67 0.0023 27.1 5.6 82 53-136 4-104 (274)
437 3gbv_A Putative LACI-family tr 34.0 1.7E+02 0.0057 22.8 9.7 114 53-179 136-265 (304)
438 3qlj_A Short chain dehydrogena 34.0 1.7E+02 0.0059 24.0 8.2 27 52-80 26-52 (322)
439 2d1y_A Hypothetical protein TT 34.0 1.7E+02 0.0059 23.0 8.7 61 52-118 5-88 (256)
440 3vtz_A Glucose 1-dehydrogenase 34.0 1.8E+02 0.0062 23.3 8.9 63 52-118 13-92 (269)
441 2i0f_A 6,7-dimethyl-8-ribityll 34.0 1.1E+02 0.0036 24.3 6.4 119 53-181 13-151 (157)
442 3rht_A (gatase1)-like protein; 33.8 26 0.00088 29.6 3.0 28 53-81 5-32 (259)
443 3bg3_A Pyruvate carboxylase, m 33.7 1.1E+02 0.0037 29.7 7.6 66 55-121 213-287 (718)
444 2p6n_A ATP-dependent RNA helic 33.7 1.6E+02 0.0053 22.7 7.4 58 52-114 54-111 (191)
445 3ojc_A Putative aspartate/glut 33.7 21 0.00072 29.2 2.3 41 95-136 64-105 (231)
446 2obx_A DMRL synthase 1, 6,7-di 33.5 78 0.0027 25.0 5.6 115 53-181 12-151 (157)
447 2c92_A 6,7-dimethyl-8-ribityll 33.2 92 0.0031 24.7 6.0 115 53-181 18-152 (160)
448 3lf2_A Short chain oxidoreduct 33.2 1.1E+02 0.0038 24.3 6.6 26 53-80 8-33 (265)
449 3vln_A GSTO-1, glutathione S-t 33.2 55 0.0019 25.4 4.7 33 64-96 31-63 (241)
450 4evq_A Putative ABC transporte 33.2 99 0.0034 25.1 6.4 84 53-136 17-112 (375)
451 2p91_A Enoyl-[acyl-carrier-pro 33.1 1.3E+02 0.0044 24.2 7.1 66 52-119 20-111 (285)
452 3fvw_A Putative NAD(P)H-depend 33.0 1.7E+02 0.0057 22.6 7.7 61 53-115 3-75 (192)
453 3l4e_A Uncharacterized peptida 32.9 72 0.0025 25.6 5.4 79 52-137 27-120 (206)
454 1ep3_A Dihydroorotate dehydrog 32.9 1.3E+02 0.0043 24.7 7.1 47 64-113 148-195 (311)
455 3edm_A Short chain dehydrogena 32.9 1.8E+02 0.0062 23.0 8.3 27 52-80 7-33 (259)
456 1sqs_A Conserved hypothetical 32.8 1.6E+02 0.0055 23.3 7.5 83 54-140 3-126 (242)
457 3s99_A Basic membrane lipoprot 32.7 2.4E+02 0.0082 24.3 10.4 82 52-139 149-238 (356)
458 3apt_A Methylenetetrahydrofola 32.7 1.1E+02 0.0038 26.2 6.9 51 67-118 60-110 (310)
459 3gem_A Short chain dehydrogena 32.6 1.1E+02 0.0038 24.5 6.6 63 52-118 26-110 (260)
460 1xhl_A Short-chain dehydrogena 32.4 1.5E+02 0.0051 24.2 7.5 12 107-118 106-117 (297)
461 1qsg_A Enoyl-[acyl-carrier-pro 32.4 1.2E+02 0.004 24.0 6.6 65 53-119 9-99 (265)
462 4g84_A Histidine--tRNA ligase, 32.2 1.2E+02 0.0041 26.5 7.2 57 54-114 368-424 (464)
463 2e6f_A Dihydroorotate dehydrog 32.1 79 0.0027 26.3 5.7 60 53-114 95-167 (314)
464 1psw_A ADP-heptose LPS heptosy 31.9 15 0.0005 30.4 1.1 29 108-140 262-290 (348)
465 4iiu_A 3-oxoacyl-[acyl-carrier 31.9 1.8E+02 0.006 23.0 7.6 26 53-80 26-51 (267)
466 3l78_A Regulatory protein SPX; 31.8 40 0.0014 24.6 3.4 39 63-101 8-47 (120)
467 1oaa_A Sepiapterin reductase; 31.8 1.4E+02 0.0049 23.4 7.0 25 93-117 72-102 (259)
468 1wma_A Carbonyl reductase [NAD 31.8 1.6E+02 0.0053 22.8 7.1 26 93-118 66-93 (276)
469 3o21_A Glutamate receptor 3; p 31.7 2.2E+02 0.0074 23.9 8.5 63 53-116 131-194 (389)
470 3pzy_A MOG; ssgcid, seattle st 31.7 77 0.0026 24.5 5.3 75 52-130 7-93 (164)
471 1gz6_A Estradiol 17 beta-dehyd 31.5 1.8E+02 0.0063 24.2 8.0 26 53-80 9-34 (319)
472 3ak4_A NADH-dependent quinucli 31.5 1.4E+02 0.0047 23.5 6.9 61 52-118 11-97 (263)
473 1di0_A Lumazine synthase; tran 31.2 85 0.0029 24.8 5.4 115 53-181 11-150 (158)
474 2b4q_A Rhamnolipids biosynthes 31.2 1.5E+02 0.0051 23.9 7.2 41 52-98 28-68 (276)
475 2ht9_A Glutaredoxin-2; thiored 31.2 77 0.0027 23.8 5.1 31 54-86 50-80 (146)
476 3s2u_A UDP-N-acetylglucosamine 31.1 1.8E+02 0.0062 24.4 8.0 32 104-135 89-120 (365)
477 1x1t_A D(-)-3-hydroxybutyrate 31.1 1.7E+02 0.0057 23.0 7.3 25 94-118 68-94 (260)
478 1w0m_A TIM, triosephosphate is 31.1 93 0.0032 25.7 5.9 66 72-140 78-144 (226)
479 3cis_A Uncharacterized protein 31.1 1.7E+02 0.0057 23.6 7.4 55 79-139 245-307 (309)
480 3sc4_A Short chain dehydrogena 30.9 1.5E+02 0.0051 24.0 7.1 26 53-80 9-34 (285)
481 2x9g_A PTR1, pteridine reducta 30.8 1.9E+02 0.0067 23.1 7.8 26 53-80 23-48 (288)
482 3s55_A Putative short-chain de 30.6 2E+02 0.007 22.8 8.5 27 92-118 82-110 (281)
483 2e6f_A Dihydroorotate dehydrog 30.4 1.7E+02 0.0059 24.2 7.6 50 64-114 144-195 (314)
484 1yde_A Retinal dehydrogenase/r 30.4 2.1E+02 0.0071 22.8 8.3 61 52-118 8-93 (270)
485 3gvc_A Oxidoreductase, probabl 30.2 1.2E+02 0.004 24.6 6.4 61 52-118 28-114 (277)
486 2ew8_A (S)-1-phenylethanol deh 30.2 2E+02 0.0067 22.5 8.4 26 53-80 7-32 (249)
487 1z41_A YQJM, probable NADH-dep 30.2 2E+02 0.0068 24.5 8.1 41 77-117 207-252 (338)
488 3afn_B Carbonyl reductase; alp 30.0 1.9E+02 0.0064 22.2 7.5 25 93-117 69-95 (258)
489 1spx_A Short-chain reductase f 29.8 1.5E+02 0.0051 23.5 6.9 26 53-80 6-31 (278)
490 3i09_A Periplasmic branched-ch 29.8 2E+02 0.0068 23.4 7.8 83 54-136 6-101 (375)
491 3v7e_A Ribosome-associated pro 29.8 85 0.0029 21.5 4.7 30 54-84 29-58 (82)
492 1b0a_A Protein (fold bifunctio 29.8 69 0.0023 27.7 5.0 54 53-106 35-89 (288)
493 1jub_A Dihydroorotate dehydrog 29.6 1.4E+02 0.0047 24.8 6.8 50 64-114 142-192 (311)
494 1pn9_A GST class-delta, glutat 29.5 75 0.0026 24.0 4.8 25 66-90 10-34 (209)
495 4glt_A Glutathione S-transfera 29.5 25 0.00087 27.4 2.1 29 66-94 32-60 (225)
496 1k0m_A CLIC1, NCC27, chloride 29.5 1.2E+02 0.0041 23.8 6.2 26 64-89 23-48 (241)
497 2z1n_A Dehydrogenase; reductas 29.5 2.1E+02 0.007 22.5 7.7 26 53-80 7-32 (260)
498 3icc_A Putative 3-oxoacyl-(acy 29.4 2E+02 0.0067 22.2 8.5 26 53-80 7-32 (255)
499 3ih5_A Electron transfer flavo 29.3 61 0.0021 26.3 4.4 78 53-135 38-120 (217)
500 3uf0_A Short-chain dehydrogena 29.1 2.2E+02 0.0076 22.8 8.9 27 52-80 30-56 (273)
No 1
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.3e-61 Score=394.27 Aligned_cols=146 Identities=34% Similarity=0.577 Sum_probs=142.5
Q ss_pred CCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccC
Q 029271 51 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 130 (196)
Q Consensus 51 ~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~ 130 (196)
+.++|+|||||+||+++|+|++++|++||++||++|+|+||+|+++.+|+++++++|++|||++||++||||||+||+|+
T Consensus 2 ~~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~ 81 (163)
T 3ors_A 2 NAMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTT 81 (163)
T ss_dssp -CCCEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCS
T ss_pred CCCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 131 ILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 131 ~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
+||||||+++++++|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 82 ~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 150 (163)
T 3ors_A 82 LPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESS 150 (163)
T ss_dssp SCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999 999999999999999999999999999973
No 2
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=1.2e-60 Score=393.50 Aligned_cols=145 Identities=32% Similarity=0.532 Sum_probs=142.3
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
.++|+|||||+||+++|+|+.++|++||++||++|+|+||+|+++.+|+++++++|++|||++||++||||||+||+|++
T Consensus 6 ~~~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 85 (169)
T 3trh_A 6 KIFVAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTLK 85 (169)
T ss_dssp CCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHHHHTCSS
T ss_pred CCcEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhcCCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 132 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 132 PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
||||||+++++++|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||+.||++
T Consensus 86 PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 153 (169)
T 3trh_A 86 PVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIALQDKSIAQKLVQQRTA 153 (169)
T ss_dssp CEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999988999999 9999999999999999999 999999999999999999999999999973
No 3
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=100.00 E-value=1.1e-60 Score=395.23 Aligned_cols=147 Identities=39% Similarity=0.638 Sum_probs=143.1
Q ss_pred CCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhcc
Q 029271 50 ADAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 129 (196)
Q Consensus 50 ~~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t 129 (196)
++.++|+|||||+||+++|+|++++|++||++||++|+||||+|+++.+|+++++++|++|||++||++||||||+||+|
T Consensus 5 ~~~~~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t 84 (174)
T 3lp6_A 5 GERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAAT 84 (174)
T ss_dssp -CCCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHC
T ss_pred CCCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHhcc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 130 QILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 130 ~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
++||||||+++++++|+| ||||+|||+|+||+||||||++|||++|+|||+++|++||+||++||++
T Consensus 85 ~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 152 (174)
T 3lp6_A 85 PLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDR 152 (174)
T ss_dssp SSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999988999999 9999999999999999999999999999999999999999999999973
No 4
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=100.00 E-value=1.4e-60 Score=394.52 Aligned_cols=148 Identities=30% Similarity=0.509 Sum_probs=143.9
Q ss_pred cCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc
Q 029271 49 AADAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 128 (196)
Q Consensus 49 ~~~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~ 128 (196)
....++|+|||||+||+++|+|+.++|++||++||++|+|+||+|+++.+|+++++++|++|||++||++||||||+||+
T Consensus 9 ~~m~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~ 88 (174)
T 3kuu_A 9 YAAGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGMLAAK 88 (174)
T ss_dssp SCCCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHHHHT
T ss_pred ccCCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhc
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 129 SQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 129 t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
|++||||||+++++++|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 89 t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~~d~~l~~kl~~~r~~ 159 (174)
T 3kuu_A 89 TLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILALHDTELAGRLAHWRQS 159 (174)
T ss_dssp CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999999998999999 9999999999999999999 999999999999999999999999999973
No 5
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=100.00 E-value=1.8e-60 Score=392.53 Aligned_cols=145 Identities=35% Similarity=0.573 Sum_probs=142.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
+|+|+|||||+||+++|+|++++|++||++||++|+|+||+|+++.+|+++++++|++|||++||++||||||+||+|++
T Consensus 11 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 90 (170)
T 1xmp_A 11 KSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNL 90 (170)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTTCCS
T ss_pred CCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 132 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 132 PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
||||||++++.++|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 91 PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~kl~~~r~~ 158 (170)
T 1xmp_A 91 PVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREA 158 (170)
T ss_dssp CEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 9999999998999999 9999999999999999999 999999999999999999999999999973
No 6
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=100.00 E-value=4.5e-60 Score=389.05 Aligned_cols=145 Identities=34% Similarity=0.592 Sum_probs=141.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
+|+|+|||||+||+++|+|++++|++||++||++|+|+||+|+++.+|+++++++|++|||++||++||||||+||+|++
T Consensus 5 ~p~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 84 (166)
T 3oow_A 5 SVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTTL 84 (166)
T ss_dssp CEEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHHTCSS
T ss_pred CCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHHHhccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 132 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 132 PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
||||||+++++|+|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 85 PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 152 (166)
T 3oow_A 85 PVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAKALAEFRAE 152 (166)
T ss_dssp CEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHH
T ss_pred CEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999 499999999999999999999999999973
No 7
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=100.00 E-value=6.6e-60 Score=393.01 Aligned_cols=145 Identities=43% Similarity=0.700 Sum_probs=142.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
-|+|+|||||+||+++|+|++++|++||++||++|+||||+|+++.+|+++++++|++||||+||++||||||+||+|++
T Consensus 13 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 92 (183)
T 1o4v_A 13 VPRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHL 92 (183)
T ss_dssp -CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSS
T ss_pred CCeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHHHhccCC
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 132 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 132 PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
||||||++++.++|+| ||||+|||+|+||+||||||++|||++|+|||+++|++||+||++||++
T Consensus 93 PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIla~~d~~l~~kL~~~r~~ 158 (183)
T 1o4v_A 93 PVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASILGIKYPEIARKVKEYKER 158 (183)
T ss_dssp CEEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 9999999998999999 9999999999999999999999999999999999999999999999973
No 8
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=100.00 E-value=1.8e-59 Score=390.15 Aligned_cols=145 Identities=35% Similarity=0.546 Sum_probs=142.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
.++|+|||||+||+++|+|+.++|++|||+||++|+|+||+|+++.+|+++++++|++|||++||++||||||+||+|++
T Consensus 21 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 100 (182)
T 1u11_A 21 APVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRL 100 (182)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSS
T ss_pred CCEEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHHHhccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 132 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 132 PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
||||||++++.++|+| ||||+|||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 101 PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~kL~~~r~~ 168 (182)
T 1u11_A 101 PVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRAL 168 (182)
T ss_dssp CEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 9999999998999999 9999999999999999999 999999999999999999999999999973
No 9
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=5.6e-59 Score=384.43 Aligned_cols=148 Identities=38% Similarity=0.594 Sum_probs=143.8
Q ss_pred cCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc
Q 029271 49 AADAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 128 (196)
Q Consensus 49 ~~~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~ 128 (196)
.++.|+|+|||||+||+++|+|+.++|++|||+||++|+||||+|+++.+|+++++++|++|||++||++||||||+||+
T Consensus 9 ~~~~P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvvA~~ 88 (173)
T 4grd_A 9 THSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGMLAAK 88 (173)
T ss_dssp CCSSCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHHHHH
T ss_pred CCCCCeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhheec
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 129 SQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 129 t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
|++||||||++++.++|+| |||++|||+|+||+||+|+ |++|||++|+|||+++|+++|+||++||++
T Consensus 89 t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa~~d~~l~~kl~~~r~~ 159 (173)
T 4grd_A 89 TTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILSGNSVDYANRLAAFRVR 159 (173)
T ss_dssp CCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999 999999999999999999999999999973
No 10
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=100.00 E-value=7.5e-59 Score=385.79 Aligned_cols=145 Identities=35% Similarity=0.573 Sum_probs=141.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
+|+|+|||||+||+++|+++.++|++|||+||++|+||||+|+++.+|+++++++|++||||+||++||||||+|++|++
T Consensus 22 kp~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvvAa~T~~ 101 (181)
T 4b4k_A 22 KSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNL 101 (181)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHTTCCS
T ss_pred CccEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhHHhcCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 132 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 132 PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~--~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
||||||+.++.++|+| ||||+|||+|+||+||+|+ +++|||++|+|||+++|++||+||+.||++
T Consensus 102 PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~qILa~~d~~l~~kl~~~r~~ 169 (181)
T 4b4k_A 102 PVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREA 169 (181)
T ss_dssp CEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 9999999998999999 9999999999999999999 789999999999999999999999999973
No 11
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=100.00 E-value=1.1e-58 Score=378.82 Aligned_cols=143 Identities=29% Similarity=0.434 Sum_probs=139.1
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC-CCeEEEEecCCCCchhHhhhhccC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGVAAANSQ 130 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~-~~~V~IavAG~sa~L~gvvA~~t~ 130 (196)
.++|+|||||+||+++|+|++++|++||++||++|+|+||+|+++.+|+++++++ +++|||++||++||||||+||+|+
T Consensus 2 ~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~LpgvvA~~t~ 81 (159)
T 3rg8_A 2 RPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFVDGFVK 81 (159)
T ss_dssp CCEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHHHHHSS
T ss_pred CCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHHHhccC
Confidence 4689999999999999999999999999999999999999999999999999986 799999999999999999999999
Q ss_pred CcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 131 ILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 131 ~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
+||||||+++++++|+|||||||||+|+||+|| +|++|||++|+|||+++|++||+||++||++
T Consensus 82 ~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVatv--~~~~nAa~lA~~Il~~~d~~l~~kl~~~r~~ 145 (159)
T 3rg8_A 82 GATIACPPPSDSFAGADIYSSLRMPSGISPALV--LEPKNAALLAARIFSLYDKEIADSVKSYMES 145 (159)
T ss_dssp SCEEECCCCCCGGGGTHHHHHHCCCTTCCCEEC--CSHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCCCCCccHHHHHhCCCCCceEEe--cCchHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 9999999999999999999999999999963
No 12
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5.8e-58 Score=373.77 Aligned_cols=139 Identities=30% Similarity=0.530 Sum_probs=135.1
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILV 133 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PV 133 (196)
+|+|+|||+||+++|+|++++|++||++||++|+|+||+|+++.+|++++++ +|||++||++||||||+||+|++||
T Consensus 1 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~---~ViIa~AG~aa~Lpgvva~~t~~PV 77 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIAIAGLAAHLPGVVASLTTKPV 77 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCC---SEEEEEEESSCCHHHHHHTTCSSCE
T ss_pred CEEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCC---CEEEEEcCchhhhHHHHHhccCCCE
Confidence 4899999999999999999999999999999999999999999999998866 8999999999999999999999999
Q ss_pred EEecCCCCCCChhh-hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 029271 134 IRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 196 (196)
Q Consensus 134 IgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~d~~l~~kl~~~r~~ 196 (196)
||||+ ++.++|+| ||||+|||+|+||+||||||++|||++|+|||+++|+++|+||++||++
T Consensus 78 IgVP~-~~~l~G~daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il~~~d~~l~~kl~~~r~~ 140 (157)
T 2ywx_A 78 IAVPV-DAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEILALKDENIAKKLIEYREK 140 (157)
T ss_dssp EEEEE-CSSGGGHHHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred EEecC-CCccCcHHHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999 77899999 9999999999999999999999999999999999999999999999973
No 13
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-56 Score=409.57 Aligned_cols=186 Identities=22% Similarity=0.297 Sum_probs=152.7
Q ss_pred cccCCccchhhhhhhhhhhhccccCCCCCccccc----cccc-cccc-cCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 7 NHQLSSRKKTLMVTLQLLRCQIVYVPAACPSTKS----CLPR-FLLL-AADAPIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 7 ~~~~~sgdk~l~~dkq~yr~l~~vt~~~~~~vk~----v~~~-~~~~-~~~~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..=|+.+++..+.|||+||+..++|+.++..|.. +..+ .... +...++|+|||||+||+|+|+||+.+|++||+
T Consensus 214 ~R~W~~~~~~~~~DK~~~R~~~~~~~~~l~~v~~~Y~eVa~rL~i~~~~~~~~~V~Ii~gs~SD~~~~~~a~~~l~~~gi 293 (425)
T 2h31_A 214 WRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGI 293 (425)
T ss_dssp EEEECCC------------------CCSSSCCCCCHHHHHTTGGGGGSCSCCCEEEEEESCGGGHHHHHHHHHHHHHTTC
T ss_pred cccccCCCCCCcccHHHHHhccccchhhHHHHHHHHHHHHHHhhcccCccCCCeEEEEecCcccHHHHHHHHHHHHHcCC
Confidence 4568888878889999999999999999988875 2222 1111 34457999999999999999999999999999
Q ss_pred CeEEEEEcccCCchHHHHHHHHHhhCCC-eEEEEecCCCCchhHhhhhccCCcEEEecCCCCCCChhh-hhhhhcCCCCC
Q 029271 81 PYEIKILPPHQNCKEALSYALSAKERGI-KIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHV 158 (196)
Q Consensus 81 ~~ev~V~SaHR~p~~~~~~~~~~e~~~~-~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGv 158 (196)
+||++|+||||+|+++.+|+++++++|+ +||||+|||+||||||+||+|++||||||++ +.++|+| ||||||||+|+
T Consensus 294 ~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~Lpgvva~~t~~PVIgvP~~-~~~~G~daLls~vqmp~g~ 372 (425)
T 2h31_A 294 PCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPL-TPDWGVQDVWSSLRLPSGL 372 (425)
T ss_dssp CEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHHHHHCSSCEEECCCC-CTTTHHHHGGGTSSCCSSC
T ss_pred ceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccchHhHHhccCCCCEEEeeCc-cccccHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999 6999999999999999999999999999996 5799999 99999999999
Q ss_pred eeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHh
Q 029271 159 QVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVE 195 (196)
Q Consensus 159 pvatV~I~~~~nAA~~AaqILa~~d~~l~~kl~~~r~ 195 (196)
||+||+ |++|||++|+|||+++|++||+||++||+
T Consensus 373 pvatv~--~~~nAa~~A~~Il~~~~~~l~~kl~~~~~ 407 (425)
T 2h31_A 373 GCSTVL--SPEGSAQFAAQIFGLSNHLVWSKLRASIL 407 (425)
T ss_dssp CCEECC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ceEEec--CchHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 999994 99999999999999999999999999996
No 14
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=97.38 E-value=0.00026 Score=63.76 Aligned_cols=87 Identities=11% Similarity=0.123 Sum_probs=70.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC-chhHhhhhccCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQI 131 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa-~L~gvvA~~t~~ 131 (196)
.++.||++...--...+++.+.|++ |+.+..-....+-+.+.+.+.++.+.+.++++||++.|++. -++..+|-....
T Consensus 53 ~r~liVtd~~~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs~~D~AK~iA~~~~~ 131 (387)
T 3uhj_A 53 KRALVLIDRVLFDALSERIGKSCGD-SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKTADTAKIVAIDTGA 131 (387)
T ss_dssp SEEEEEECTTTHHHHHHHC-------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHTTC
T ss_pred CEEEEEECchHHHHHHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcHHHHHHHHHHHhcCC
Confidence 5899999988876788999999999 99885555678888899999999998889999999999864 588999999999
Q ss_pred cEEEecCCC
Q 029271 132 LVIRVPLLS 140 (196)
Q Consensus 132 PVIgvP~~~ 140 (196)
|+|.||+..
T Consensus 132 p~i~IPTTa 140 (387)
T 3uhj_A 132 RIVIAPTIA 140 (387)
T ss_dssp EEEECCSSC
T ss_pred CEEEecCcc
Confidence 999999974
No 15
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=97.25 E-value=0.00028 Score=62.14 Aligned_cols=88 Identities=14% Similarity=0.060 Sum_probs=73.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhhhccCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANSQI 131 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA~~t~~ 131 (196)
.++.||++..+.....+++.+.|++-|+.+.+.+.+-+.+.+.+.+..+.+.+.++++||++.|++ .-+++.+|-...+
T Consensus 32 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~ 111 (370)
T 1jq5_A 32 NKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADELDA 111 (370)
T ss_dssp SEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEChHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHHhcCC
Confidence 589999988776677899999999999987654555555666888888888888999999998874 6699999988999
Q ss_pred cEEEecCCC
Q 029271 132 LVIRVPLLS 140 (196)
Q Consensus 132 PVIgvP~~~ 140 (196)
|+|.||+..
T Consensus 112 p~i~IPTTa 120 (370)
T 1jq5_A 112 YIVIVPTAA 120 (370)
T ss_dssp EEEEEESSC
T ss_pred CEEEecccc
Confidence 999999974
No 16
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=97.01 E-value=0.00093 Score=58.47 Aligned_cols=88 Identities=10% Similarity=0.004 Sum_probs=73.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCC-CCchhHhhhhccCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQI 131 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~-sa~L~gvvA~~t~~ 131 (196)
.++.||++........+++.+.|++-|+++.+-.-..+-+.+.+.+. +.+.+.++++||++.|+ ..-+++.+|-....
T Consensus 35 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGGGsv~D~aK~vA~~~~~ 113 (354)
T 3ce9_A 35 KRVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGGGKAIDAVKYMAFLRKL 113 (354)
T ss_dssp SEEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEESHHHHHHHHHHHHHHTC
T ss_pred CeEEEEECccHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECChHHHHHHHHHHhhcCC
Confidence 48999999887767889999999999998765442466788888888 87777788999999886 45699999999999
Q ss_pred cEEEecCCCC
Q 029271 132 LVIRVPLLSE 141 (196)
Q Consensus 132 PVIgvP~~~~ 141 (196)
|+|.||+..+
T Consensus 114 p~i~IPTT~~ 123 (354)
T 3ce9_A 114 PFISVPTSTS 123 (354)
T ss_dssp CEEEEESCCS
T ss_pred CEEEecCccc
Confidence 9999999764
No 17
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=96.97 E-value=0.0016 Score=57.79 Aligned_cols=88 Identities=10% Similarity=0.077 Sum_probs=71.3
Q ss_pred CeEEEEEcCCCCHH---HHHHHHHHHHHhCCCeEE-EEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhhh
Q 029271 53 PIVGIIMESDLDLP---VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~~---~~~~~~~~l~~~gi~~ev-~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA~ 127 (196)
.++.||++...-.. ..+++.+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++||++.|++ --++..+|.
T Consensus 34 ~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~ 113 (387)
T 3bfj_A 34 KKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGI 113 (387)
T ss_dssp SEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHH
T ss_pred CEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHH
Confidence 58999998876555 899999999999997632 1234788999999999999999999999998874 458888887
Q ss_pred c------------------cCCcEEEecCCC
Q 029271 128 N------------------SQILVIRVPLLS 140 (196)
Q Consensus 128 ~------------------t~~PVIgvP~~~ 140 (196)
. ..+|+|.||+..
T Consensus 114 ~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 144 (387)
T 3bfj_A 114 AATHEGDLYQYAGIETLTNPLPPIVAVNTTA 144 (387)
T ss_dssp HHHSSSCSGGGCBSSCCCSCCCCEEEEECST
T ss_pred HHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 5 578999999975
No 18
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=96.93 E-value=0.0026 Score=56.35 Aligned_cols=89 Identities=10% Similarity=0.166 Sum_probs=71.8
Q ss_pred CeEEEEEcCCCCH--HHHHHHHHHHHHhCCCeEE-EEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhhhc
Q 029271 53 PIVGIIMESDLDL--PVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAAN 128 (196)
Q Consensus 53 ~~V~IimGS~SD~--~~~~~~~~~l~~~gi~~ev-~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA~~ 128 (196)
.++.||++..+-. ...+++.+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++||++.|++ --++.++|..
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~AK~iA~~ 120 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVL 120 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHHHHHHHHHHHH
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHHH
Confidence 5899999875533 3789999999999987643 2235889999999999999888899999998874 4588888875
Q ss_pred ------------------cCCcEEEecCCCC
Q 029271 129 ------------------SQILVIRVPLLSE 141 (196)
Q Consensus 129 ------------------t~~PVIgvP~~~~ 141 (196)
..+|+|.||+..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~p~i~IPTTag 151 (371)
T 1o2d_A 121 LKEKDLSVEDLYDREKVKHWLPVVEIPTTAG 151 (371)
T ss_dssp TTSTTCCSGGGGCGGGCCCCCCEEEEECSSC
T ss_pred HhCCCCCHHHHhcccCCCCCCeEEEEeCCCc
Confidence 5789999999853
No 19
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=96.90 E-value=0.001 Score=59.30 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=71.2
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEE-EEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC-chhHhhhhcc
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANS 129 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev-~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa-~L~gvvA~~t 129 (196)
.++.||++..-. ....+++.+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++||++.|++. -++..+|...
T Consensus 32 ~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv~D~aK~ia~~~ 111 (383)
T 3ox4_A 32 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVA 111 (383)
T ss_dssp CEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHH
T ss_pred CEEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 589999986422 12678899999999998753 33458999999999999998889999999999864 4777777765
Q ss_pred ------------------CCcEEEecCCCC
Q 029271 130 ------------------QILVIRVPLLSE 141 (196)
Q Consensus 130 ------------------~~PVIgvP~~~~ 141 (196)
.+|+|.||+..+
T Consensus 112 ~~~~~~~d~~~~~~~~~~~~p~i~IPTTag 141 (383)
T 3ox4_A 112 TNGGEVKDYEGIDKSKKPALPLMSINTTAG 141 (383)
T ss_dssp HSCSSGGGGCEESCCSSCCSCEEEEECSSS
T ss_pred hCCCCHHHHhcccccccCCCCEEEEeCCCC
Confidence 799999999753
No 20
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=96.88 E-value=0.0033 Score=56.99 Aligned_cols=88 Identities=18% Similarity=0.154 Sum_probs=74.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHHhhCCC---eEEEEecCCC-CchhHh
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGVE-AHLSGV 124 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~e~~~~---~V~IavAG~s-a~L~gv 124 (196)
..+|.||++....--+.+++.+.|++.|+++++-+.. .+++.+.+.++.+.+.+.++ +++||+.|++ .-++++
T Consensus 62 ~~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGGGsv~D~ak~ 141 (390)
T 3okf_A 62 KQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGF 141 (390)
T ss_dssp TCEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHH
T ss_pred CCEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECCcHHhhHHHH
Confidence 3589999999988779999999999999988765543 57889999999999988888 6999998884 568888
Q ss_pred hhh--ccCCcEEEecCC
Q 029271 125 AAA--NSQILVIRVPLL 139 (196)
Q Consensus 125 vA~--~t~~PVIgvP~~ 139 (196)
+|+ ....|+|.+|+.
T Consensus 142 ~Aa~~~rgip~I~IPTT 158 (390)
T 3okf_A 142 AAACYQRGVDFIQIPTT 158 (390)
T ss_dssp HHHHBTTCCEEEEEECS
T ss_pred HHHHhcCCCCEEEeCCC
Confidence 874 578999999996
No 21
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=96.82 E-value=0.00074 Score=59.87 Aligned_cols=86 Identities=10% Similarity=0.040 Sum_probs=68.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCc-hhHhhhhccCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH-LSGVAAANSQI 131 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~-L~gvvA~~t~~ 131 (196)
.+|.||++... ....+++.+.|++.++.+--. ...+.+.+.+.+.++.+...++++||++.|++.. ++..+|....+
T Consensus 35 ~r~liVtd~~~-~~~~~~v~~~L~~~~~~v~~~-v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~ 112 (353)
T 3hl0_A 35 SRALVLSTPQQ-KGDAEALASRLGRLAAGVFSE-AAMHTPVEVTKTAVEAYRAAGADCVVSLGGGSTTGLGKAIALRTDA 112 (353)
T ss_dssp CCEEEECCGGG-HHHHHHHHHHHGGGEEEEECC-CCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CEEEEEecCch-hhHHHHHHHHHhhCCcEEecC-cCCCCcHHHHHHHHHHHhccCCCEEEEeCCcHHHHHHHHHHhccCC
Confidence 47999998764 567888888888754321111 1257777889999999988899999999999654 89999999999
Q ss_pred cEEEecCCC
Q 029271 132 LVIRVPLLS 140 (196)
Q Consensus 132 PVIgvP~~~ 140 (196)
|+|.||+..
T Consensus 113 p~i~IPTTa 121 (353)
T 3hl0_A 113 AQIVIPTTY 121 (353)
T ss_dssp EEEEEECSS
T ss_pred CEEEEeCCc
Confidence 999999975
No 22
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=96.81 E-value=0.0035 Score=56.04 Aligned_cols=87 Identities=11% Similarity=0.121 Sum_probs=71.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHh------CCCeEEEEEcc---cCCchHHHHHHHHHhhCC--C---eEEEEecCC-
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDF------GVPYEIKILPP---HQNCKEALSYALSAKERG--I---KIIIVGDGV- 117 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~------gi~~ev~V~Sa---HR~p~~~~~~~~~~e~~~--~---~V~IavAG~- 117 (196)
.++.||++.....-+.+++.+.|+.. |+.+..-+... +++.+.+.++.+.+.+.+ + +++||+.|+
T Consensus 37 ~k~liVtd~~v~~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGs 116 (393)
T 1sg6_A 37 TTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGV 116 (393)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcH
Confidence 58999998765444788899999877 77766445555 889999999999998888 8 999999887
Q ss_pred CCchhHhhhh--ccCCcEEEecCC
Q 029271 118 EAHLSGVAAA--NSQILVIRVPLL 139 (196)
Q Consensus 118 sa~L~gvvA~--~t~~PVIgvP~~ 139 (196)
..-+++++|+ ....|+|.||+.
T Consensus 117 v~D~ak~~Aa~~~rgip~i~IPTT 140 (393)
T 1sg6_A 117 IGDLTGFVASTYMRGVRYVQVPTT 140 (393)
T ss_dssp HHHHHHHHHHHGGGCCEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEECCc
Confidence 4669999995 578999999995
No 23
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=96.70 E-value=0.0045 Score=55.42 Aligned_cols=86 Identities=14% Similarity=0.145 Sum_probs=68.9
Q ss_pred CeEEEEEcCCCCH--HHHHHHHHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhh
Q 029271 53 PIVGIIMESDLDL--PVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAA 126 (196)
Q Consensus 53 ~~V~IimGS~SD~--~~~~~~~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA 126 (196)
.++.||++..+=. ...+++.+.|++-|+.+. +.+ .+.+.+.+.+.++.+.+.++++||++.|+| --++..+|
T Consensus 44 ~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~--~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~AK~iA 121 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWV--EVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVA 121 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEE--EECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHH
T ss_pred CeEEEEECchHHhhccHHHHHHHHHHHcCCeEE--EecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhHHHHHHHHH
Confidence 5899999854322 378999999999998764 333 478889999999999999999999998875 45788887
Q ss_pred hc------------------cCCcEEEecCCC
Q 029271 127 AN------------------SQILVIRVPLLS 140 (196)
Q Consensus 127 ~~------------------t~~PVIgvP~~~ 140 (196)
.. ..+|+|.||+..
T Consensus 122 ~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTa 153 (407)
T 1vlj_A 122 AGALYEGDIWDAFIGKYQIEKALPIFDVLTIS 153 (407)
T ss_dssp HHTTCSSCGGGGGGTSCCCCCCCCEEEEECSC
T ss_pred HHHhCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 74 478999999975
No 24
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=96.70 E-value=0.0013 Score=60.25 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=71.3
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhhhccCCc
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANSQIL 132 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA~~t~~P 132 (196)
+|.||++..+.....+++.+.|++-|+.+.+.+.+-+.+-+.+.+..+.+.+ ++++|||+.|++ .-++..+|-...+|
T Consensus 93 rvlIVtd~~~~~~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGGGSviD~AK~iA~~~giP 171 (450)
T 1ta9_A 93 SAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKTMDSAKYIAHSMNLP 171 (450)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEESHHHHHHHHHHHHHTTCC
T ss_pred EEEEEECccHHHHHHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCCcHHHHHHHHHHHhcCCC
Confidence 8999998776556889999999999998765555556666678888877777 889999998875 56999999989999
Q ss_pred EEEecCCC
Q 029271 133 VIRVPLLS 140 (196)
Q Consensus 133 VIgvP~~~ 140 (196)
+|.||+..
T Consensus 172 ~I~IPTTA 179 (450)
T 1ta9_A 172 SIICPTTA 179 (450)
T ss_dssp EEEEESSC
T ss_pred EEEEeCCC
Confidence 99999974
No 25
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=96.60 E-value=0.0012 Score=58.82 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=67.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC-chhHhhhhccCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQI 131 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa-~L~gvvA~~t~~ 131 (196)
.+|.||++... ....+++.+.|+..++.+ +.-...|.+.+.+.+.++.+.+.++++||++.|++. -++..+|....+
T Consensus 37 ~r~liVtd~~~-~~~~~~v~~~L~~~~~~~-f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~aK~iA~~~~~ 114 (358)
T 3jzd_A 37 KRALVLCTPNQ-QAEAERIADLLGPLSAGV-YAGAVMHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAIALETGM 114 (358)
T ss_dssp SCEEEECCGGG-HHHHHHHHHHHGGGEEEE-ECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CeEEEEeCCcH-HHHHHHHHHHhccCCEEE-ecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHhccCC
Confidence 47999998764 567888888887654311 111235677888889999888889999999999965 489999999999
Q ss_pred cEEEecCCC
Q 029271 132 LVIRVPLLS 140 (196)
Q Consensus 132 PVIgvP~~~ 140 (196)
|+|.||+..
T Consensus 115 p~i~IPTT~ 123 (358)
T 3jzd_A 115 PIVAIPTTY 123 (358)
T ss_dssp CEEEEECSS
T ss_pred CEEEEeCCc
Confidence 999999974
No 26
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=96.55 E-value=0.002 Score=56.99 Aligned_cols=88 Identities=13% Similarity=0.142 Sum_probs=69.8
Q ss_pred CeEEEEEcCCCCH-HHHHHHHHHHHHhCCCeEE-EEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhhhcc
Q 029271 53 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANS 129 (196)
Q Consensus 53 ~~V~IimGS~SD~-~~~~~~~~~l~~~gi~~ev-~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA~~t 129 (196)
.++.||++..... ...+++.+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++||++.|++ .-++.++|...
T Consensus 32 ~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~ 111 (386)
T 1rrm_A 32 QKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIIS 111 (386)
T ss_dssp CEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHH
T ss_pred CEEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHHHHHHHHHHHHH
Confidence 5899999765422 3789999999999987642 2234788899999999999988999999998874 45788887754
Q ss_pred --------------------CCcEEEecCCC
Q 029271 130 --------------------QILVIRVPLLS 140 (196)
Q Consensus 130 --------------------~~PVIgvP~~~ 140 (196)
.+|+|.||+..
T Consensus 112 ~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 142 (386)
T 1rrm_A 112 NNPEFADVRSLEGLSPTNKPSVPILAIPTTA 142 (386)
T ss_dssp HCGGGTTSGGGSEECCCCSCCSCEEEEECSS
T ss_pred hCCCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 78999999975
No 27
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=96.44 E-value=0.016 Score=47.24 Aligned_cols=126 Identities=13% Similarity=0.115 Sum_probs=83.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCc
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 132 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~P 132 (196)
.+++++..... -.+.+.+++.+++...++.+. ..++..+.++++ ..|++|||+-.|. +..+-.+++.|
T Consensus 5 ~~I~~iapy~~---l~~~~~~i~~e~~~~i~i~~~----~l~~~v~~a~~~-~~~~dVIISRGgt----a~~lr~~~~iP 72 (196)
T 2q5c_A 5 LKIALISQNEN---LLNLFPKLALEKNFIPITKTA----SLTRASKIAFGL-QDEVDAIISRGAT----SDYIKKSVSIP 72 (196)
T ss_dssp CEEEEEESCHH---HHHHHHHHHHHHTCEEEEEEC----CHHHHHHHHHHH-TTTCSEEEEEHHH----HHHHHTTCSSC
T ss_pred CcEEEEEccHH---HHHHHHHHHhhhCCceEEEEC----CHHHHHHHHHHh-cCCCeEEEECChH----HHHHHHhCCCC
Confidence 46677765533 333555556677774444433 468888888888 8899999996554 44556678899
Q ss_pred EEEecCCCCCCChhhhhhhhcCCC--CCeeeEEecCChhhHHHHHHHHHccC--------CHHHHHHHHHHHh
Q 029271 133 VIRVPLLSEDWSEDDVINSIRMPS--HVQVASVPRNNAKNAALYAVKVLGIA--------DEDLLERIRKYVE 195 (196)
Q Consensus 133 VIgvP~~~~~~~G~DLlS~lqmPs--GvpvatV~I~~~~nAA~~AaqILa~~--------d~~l~~kl~~~r~ 195 (196)
||-+|++ |.|++..++... +-.++.|+-.+....+-.-.++|++. .+++++.++..++
T Consensus 73 VV~I~~s-----~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~ 140 (196)
T 2q5c_A 73 SISIKVT-----RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKT 140 (196)
T ss_dssp EEEECCC-----HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHH
T ss_pred EEEEcCC-----HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH
Confidence 9999875 467444444311 22688888788887777778888853 3466666666554
No 28
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=96.21 E-value=0.0064 Score=54.40 Aligned_cols=84 Identities=17% Similarity=0.125 Sum_probs=65.1
Q ss_pred CeEEEEEcCCCCHH--HHHHHHHHHHHhCCCeEEEEE---cccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhh
Q 029271 53 PIVGIIMESDLDLP--VMNDAARTLSDFGVPYEIKIL---PPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAA 126 (196)
Q Consensus 53 ~~V~IimGS~SD~~--~~~~~~~~l~~~gi~~ev~V~---SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA 126 (196)
.++.||++..+-.. ..+++.+.|+ |+++. +. ..+.+.+.+.+.++.+.+.++++||++.|++ --++..+|
T Consensus 51 ~r~liVtd~~~~~~~g~~~~v~~~L~--g~~~~--~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~AK~iA 126 (408)
T 1oj7_A 51 ARVLITYGGGSVKKTGVLDQVLDALK--GMDVL--EFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIA 126 (408)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTT--TSEEE--EECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHHHHHHHHHH
T ss_pred CEEEEEECCchhhhccHHHHHHHHhC--CCEEE--EeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHH
Confidence 58999998764333 6788887776 77643 33 2578889999999999888999999998875 45778887
Q ss_pred hc---------------------cCCcEEEecCCC
Q 029271 127 AN---------------------SQILVIRVPLLS 140 (196)
Q Consensus 127 ~~---------------------t~~PVIgvP~~~ 140 (196)
.. ..+|+|.||+..
T Consensus 127 ~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTa 161 (408)
T 1oj7_A 127 AAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLP 161 (408)
T ss_dssp HHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSC
T ss_pred HHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCC
Confidence 74 458999999975
No 29
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=96.15 E-value=0.078 Score=44.50 Aligned_cols=128 Identities=13% Similarity=0.094 Sum_probs=86.4
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh-CCCeEEEEecCCCCchhHhhhhccCCc
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGVAAANSQIL 132 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~-~~~~V~IavAG~sa~L~gvvA~~t~~P 132 (196)
.++++.+. ..-.+.+.+++.+++...++.+.. ...++..+.++++.. .+++|||+-.|. +..+-.+++.|
T Consensus 14 ~ii~i~~~---~~L~~~~~~i~~e~~~~~~I~vi~--~~le~av~~a~~~~~~~~~dVIISRGgt----a~~Lr~~~~iP 84 (225)
T 2pju_A 14 PVIWTVSV---TRLFELFRDISLEFDHLANITPIQ--LGFEKAVTYIRKKLANERCDAIIAAGSN----GAYLKSRLSVP 84 (225)
T ss_dssp CEEEEECC---HHHHHHHHHHHTTTTTTCEEEEEC--CCHHHHHHHHHHHTTTSCCSEEEEEHHH----HHHHHTTCSSC
T ss_pred CEEEEEch---HHHHHHHHHHHHhhCCCceEEEec--CcHHHHHHHHHHHHhcCCCeEEEeCChH----HHHHHhhCCCC
Confidence 45555543 233335666667888777877743 345777777777544 469999996555 44556678899
Q ss_pred EEEecCCCCCCChhhhhhhhcCCCC--CeeeEEecCChhhHHHHHHHHHccC--------CHHHHHHHHHHHh
Q 029271 133 VIRVPLLSEDWSEDDVINSIRMPSH--VQVASVPRNNAKNAALYAVKVLGIA--------DEDLLERIRKYVE 195 (196)
Q Consensus 133 VIgvP~~~~~~~G~DLlS~lqmPsG--vpvatV~I~~~~nAA~~AaqILa~~--------d~~l~~kl~~~r~ 195 (196)
||-+|++ |.|++..++.... -.++.|+-.+..+.+-.-.++|++. .+++.+.++..++
T Consensus 85 VV~I~vs-----~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~ 152 (225)
T 2pju_A 85 VILIKPS-----GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKA 152 (225)
T ss_dssp EEEECCC-----HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEecCC-----HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH
Confidence 9999875 5775555554222 2488888888888887788899865 4577777766654
No 30
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=96.14 E-value=0.022 Score=50.45 Aligned_cols=86 Identities=21% Similarity=0.216 Sum_probs=69.7
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHHhhCC---CeEEEEecCC-CCchhHhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERG---IKIIIVGDGV-EAHLSGVA 125 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~e~~~---~~V~IavAG~-sa~L~gvv 125 (196)
.++.||++....--+.+++.+.|+.. +.++..+.. .+++.+.+.++.+.+.+.+ .+++||+.|+ ..-+++++
T Consensus 35 ~k~liVtd~~v~~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGGGsv~D~ak~~ 113 (368)
T 2gru_A 35 DQYIMISDSGVPDSIVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGVA 113 (368)
T ss_dssp SEEEEEEETTSCHHHHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECChHHHHHHHHH
Confidence 58999999888877899999999766 666544432 6788889998888887777 5899999886 56799999
Q ss_pred hh--ccCCcEEEecCC
Q 029271 126 AA--NSQILVIRVPLL 139 (196)
Q Consensus 126 A~--~t~~PVIgvP~~ 139 (196)
|+ ....|+|.+|+.
T Consensus 114 Aa~~~rgip~i~IPTT 129 (368)
T 2gru_A 114 AGMMFRGIALIHVPTT 129 (368)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHhcCCCCEEEECCc
Confidence 96 457999999994
No 31
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=95.99 E-value=0.34 Score=38.89 Aligned_cols=86 Identities=14% Similarity=0.062 Sum_probs=61.8
Q ss_pred CCCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh
Q 029271 50 ADAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 126 (196)
Q Consensus 50 ~~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA 126 (196)
..+.+|++++-+.++- ...+.+.+.++++|+ ++.+...+..+++..++++.+..++++-||............+.
T Consensus 3 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~ 80 (291)
T 3l49_A 3 LEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGG--TAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQ 80 (291)
T ss_dssp CTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHH
Confidence 4456899999877763 456778888889986 66667788888888889998888889877765544334444443
Q ss_pred --hccCCcEEEec
Q 029271 127 --ANSQILVIRVP 137 (196)
Q Consensus 127 --~~t~~PVIgvP 137 (196)
.....|||.+-
T Consensus 81 ~~~~~~iPvV~~~ 93 (291)
T 3l49_A 81 KINDAGIPLFTVD 93 (291)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHHCCCcEEEec
Confidence 23578998763
No 32
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=95.90 E-value=0.015 Score=52.25 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=69.8
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHHhhCC---CeEEEEecCCC-CchhHhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERG---IKIIIVGDGVE-AHLSGVA 125 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~e~~~---~~V~IavAG~s-a~L~gvv 125 (196)
.+|.||++....- .++++.+.|++-|+++++-+.. .+++.+.+.++.+.+.+.+ .+++||+.|++ .-+++++
T Consensus 44 ~rvlIVtd~~v~~-~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGGGsv~D~ak~~ 122 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFA 122 (368)
T ss_dssp SEEEEEECGGGHH-HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECccHHH-HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECChHHHHHHHHH
Confidence 6899999987654 5899999999999987765542 5778888988888877655 48999999885 5689999
Q ss_pred hh--ccCCcEEEecCC
Q 029271 126 AA--NSQILVIRVPLL 139 (196)
Q Consensus 126 A~--~t~~PVIgvP~~ 139 (196)
|+ ....|+|.+|+.
T Consensus 123 Aa~~~rgip~i~IPTT 138 (368)
T 3qbe_A 123 AATWLRGVSIVHLPTT 138 (368)
T ss_dssp HHHGGGCCEEEEEECS
T ss_pred HHHhccCCcEEEECCC
Confidence 84 478999999996
No 33
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=95.81 E-value=0.38 Score=38.85 Aligned_cols=83 Identities=11% Similarity=0.087 Sum_probs=59.4
Q ss_pred CCCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh-
Q 029271 51 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 126 (196)
Q Consensus 51 ~~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA- 126 (196)
.+..|++++.+.++ ....+.+.+.++++|+ ++.+...+..++...++++.+..++++-+|...... ....+.
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~~ 82 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGY--SVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG--EHDYLRT 82 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS--CCHHHHH
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC--ChHHHHH
Confidence 35689999988777 3556677788888885 666777888888888899999888897666544432 233333
Q ss_pred -hccCCcEEEec
Q 029271 127 -ANSQILVIRVP 137 (196)
Q Consensus 127 -~~t~~PVIgvP 137 (196)
....+||+.+=
T Consensus 83 ~~~~~iPvV~~~ 94 (291)
T 3egc_A 83 ELPKTFPIVAVN 94 (291)
T ss_dssp SSCTTSCEEEES
T ss_pred hhccCCCEEEEe
Confidence 24578888654
No 34
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=95.79 E-value=0.63 Score=38.02 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=61.5
Q ss_pred CeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh--
Q 029271 53 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 127 (196)
Q Consensus 53 ~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~-- 127 (196)
.+|++++-+.++ ....+.+.+.++++|+ ++.+......++...++++.+..++++.||........+...+.-
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 80 (313)
T 3m9w_A 3 VKIGMAIDDLRLERWQKDRDIFVKKAESLGA--KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAK 80 (313)
T ss_dssp CEEEEEESCCSSSTTHHHHHHHHHHHHHTSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHH
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHH
Confidence 578888876443 5667788888899986 566667788888888899988888998777776666665555543
Q ss_pred ccCCcEEEec
Q 029271 128 NSQILVIRVP 137 (196)
Q Consensus 128 ~t~~PVIgvP 137 (196)
...+|||.+=
T Consensus 81 ~~~iPvV~~~ 90 (313)
T 3m9w_A 81 QEGIKVLAYD 90 (313)
T ss_dssp TTTCEEEEES
T ss_pred HCCCeEEEEC
Confidence 3578998764
No 35
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=95.71 E-value=0.0098 Score=52.19 Aligned_cols=86 Identities=15% Similarity=0.158 Sum_probs=63.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHHhhCCC---eEEEEecCC-CCchhHhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVA 125 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~e~~~~---~V~IavAG~-sa~L~gvv 125 (196)
.++.||++....-.+.+++.+.| +-| .+++.+.. .+++.+.+.+..+.+.+.++ ++|||+.|+ ..-+++++
T Consensus 32 ~~~liVtd~~~~~~~~~~v~~~L-~~g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~ak~v 109 (354)
T 1xah_A 32 DQSFLLIDEYVNQYFANKFDDIL-SYE-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFV 109 (354)
T ss_dssp SCEEEEEEHHHHHHHHHHHC--------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHHHHHHHHHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHH-hcC-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECChHHHHHHHHH
Confidence 57999997654444677788888 777 66655543 57899999999999998888 899999887 55699999
Q ss_pred hh--ccCCcEEEecCCC
Q 029271 126 AA--NSQILVIRVPLLS 140 (196)
Q Consensus 126 A~--~t~~PVIgvP~~~ 140 (196)
|+ ....|+|.||+..
T Consensus 110 A~~~~rgip~i~IPTT~ 126 (354)
T 1xah_A 110 AATLLRGVHFIQVPTTI 126 (354)
T ss_dssp HHHBTTCCEEEEEECST
T ss_pred HHHhccCCCEEEECCcc
Confidence 95 5789999999974
No 36
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.71 E-value=0.0052 Score=54.79 Aligned_cols=84 Identities=14% Similarity=0.152 Sum_probs=63.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC-chhHhhhhccCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQI 131 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa-~L~gvvA~~t~~ 131 (196)
.+|.||++... ....+++.+.|+ -.+.+.-...+.+.+.+.+.++.+.+.++++||++.|++. -++..+|....+
T Consensus 38 ~rvliVtd~~~-~~~~~~v~~~L~---~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~ 113 (364)
T 3iv7_A 38 AKVMVIAGERE-MSIAHKVASEIE---VAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTAL 113 (364)
T ss_dssp SSEEEECCGGG-HHHHHHHTTTSC---CSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CEEEEEECCCH-HHHHHHHHHHcC---CCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHhccCC
Confidence 47999998763 344454444443 2222323346888899999999999999999999999965 488899999999
Q ss_pred cEEEecCCC
Q 029271 132 LVIRVPLLS 140 (196)
Q Consensus 132 PVIgvP~~~ 140 (196)
|+|.||+..
T Consensus 114 P~i~IPTTa 122 (364)
T 3iv7_A 114 PIVAIPTTY 122 (364)
T ss_dssp CEEEEECSS
T ss_pred CEEEEcCCc
Confidence 999999975
No 37
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=95.52 E-value=0.012 Score=51.76 Aligned_cols=83 Identities=13% Similarity=0.167 Sum_probs=65.1
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE--cccCCchHHHHHHHHHhhCCC---eEEEEecCC-CCchhHhhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL--PPHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVAA 126 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~--SaHR~p~~~~~~~~~~e~~~~---~V~IavAG~-sa~L~gvvA 126 (196)
.+|.||++....- +.+++.+.|+ +++. +-+. -.+++.+.+.++.+.+.+.++ +++|++.|+ ..-+++++|
T Consensus 29 ~kvliVtd~~v~~-~~~~v~~~L~-~~~~--~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGsv~D~ak~~A 104 (348)
T 1ujn_A 29 GPAALLFDRRVEG-FAQEVAKALG-VRHL--LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVA 104 (348)
T ss_dssp SCEEEEEEGGGHH-HHHHHHHHHT-CCCE--EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHHH
T ss_pred CEEEEEECCcHHH-HHHHHHHHhc-cCeE--EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHH
Confidence 4899999887666 8888888887 5554 2222 367888999999888877666 799999876 567999999
Q ss_pred h--ccCCcEEEecCC
Q 029271 127 A--NSQILVIRVPLL 139 (196)
Q Consensus 127 ~--~t~~PVIgvP~~ 139 (196)
+ ....|+|.||+.
T Consensus 105 ~~~~rgip~i~IPTT 119 (348)
T 1ujn_A 105 ATYLRGVAYLAFPTT 119 (348)
T ss_dssp HHBTTCCEEEEEECS
T ss_pred HHhccCCCEEEecCc
Confidence 5 567899999995
No 38
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=95.42 E-value=0.3 Score=40.02 Aligned_cols=123 Identities=11% Similarity=0.149 Sum_probs=77.2
Q ss_pred CCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC---chhHhh
Q 029271 52 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA---HLSGVA 125 (196)
Q Consensus 52 ~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa---~L~gvv 125 (196)
+..|++++.+.++ ....+.+.+.++++|.. +-+...+..++...++++.+..++++-+|....... .+.-..
T Consensus 15 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~ 92 (303)
T 3kke_A 15 SGTIGLIVPDVNNAVFADMFSGVQMAASGHSTD--VLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVL 92 (303)
T ss_dssp --CEEEEESCTTSTTHHHHHHHHHHHHHHTTCC--EEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHH
T ss_pred CCEEEEEeCCCcChHHHHHHHHHHHHHHHCCCE--EEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHh
Confidence 4579999987776 56677888888999875 456677888888888999888888975555544333 222222
Q ss_pred hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccC------------CHHHHHHHHHH
Q 029271 126 AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIA------------DEDLLERIRKY 193 (196)
Q Consensus 126 A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~------------d~~l~~kl~~~ 193 (196)
. .+|||.+=... ++ ++..|++|+-.++.+++-.++... .....+|++.|
T Consensus 93 --~-~iPvV~i~~~~---------------~~-~~~~V~~D~~~~g~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf 153 (303)
T 3kke_A 93 --E-GVPAVTINSRV---------------PG-RVGSVILDDQKGGGIATEHLITLGHSRIAFISGTAIHDTAQRRKEGY 153 (303)
T ss_dssp --T-TSCEEEESCCC---------------TT-CCCEEEECHHHHHHHHHHHHHHTTCCSEEEEESCSSCHHHHHHHHHH
T ss_pred --C-CCCEEEECCcC---------------CC-CCCEEEECcHHHHHHHHHHHHHCCCCeEEEEeCCCcCccHHHHHHHH
Confidence 2 78888763221 22 345566676655555544444332 23445667666
Q ss_pred Hh
Q 029271 194 VE 195 (196)
Q Consensus 194 r~ 195 (196)
++
T Consensus 154 ~~ 155 (303)
T 3kke_A 154 LE 155 (303)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 39
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=94.92 E-value=0.66 Score=38.53 Aligned_cols=84 Identities=8% Similarity=0.087 Sum_probs=57.2
Q ss_pred CCCeEEEEEcC--CCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh
Q 029271 51 DAPIVGIIMES--DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 51 ~~~~V~IimGS--~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv 125 (196)
.+..|+++..+ .++ ....+.+.+.+++.|. ++-+...+..++.-.++++.+..++++-+|........ ..+.
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~ 136 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV-DEID 136 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTC--EEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCH-HHHH
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCh-HHHH
Confidence 34589999987 444 3566777888888986 56677788888888888888888889766655433222 2222
Q ss_pred --hhccCCcEEEec
Q 029271 126 --AANSQILVIRVP 137 (196)
Q Consensus 126 --A~~t~~PVIgvP 137 (196)
......||+-+=
T Consensus 137 ~~~~~~~iPvV~~~ 150 (338)
T 3dbi_A 137 DIIDAHSQPIMVLN 150 (338)
T ss_dssp HHHHHCSSCEEEES
T ss_pred HHHHcCCCCEEEEc
Confidence 234568888653
No 40
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=94.81 E-value=1.2 Score=35.26 Aligned_cols=111 Identities=11% Similarity=0.119 Sum_probs=69.6
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-- 126 (196)
+.+|++++.+.++- ...+.+.+.++++|. ++.+...+..++...++++.+..++++-+|........ ...+.
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~ 78 (272)
T 3o74_A 2 TRTLGFILPDLENPSYARIAKQLEQGARARGY--QLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPE-DDSYREL 78 (272)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSS-CCHHHHH
T ss_pred ceEEEEEeCCCcChhHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-HHHHHHH
Confidence 35799999887763 445677778888887 55566778888888889998888889766665544222 12221
Q ss_pred hccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHc
Q 029271 127 ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLG 180 (196)
Q Consensus 127 ~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa 180 (196)
.....||+.+=... ++.++..|+.|+-.++-+++-.++.
T Consensus 79 ~~~~iPvV~~~~~~---------------~~~~~~~V~~d~~~~~~~a~~~L~~ 117 (272)
T 3o74_A 79 QDKGLPVIAIDRRL---------------DPAHFCSVISDDRDASRQLAASLLS 117 (272)
T ss_dssp HHTTCCEEEESSCC---------------CTTTCEEEEECHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEEccCC---------------CccccCEEEEchHHHHHHHHHHHHH
Confidence 23578888653221 1112345666766655555544443
No 41
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=94.67 E-value=1.1 Score=37.32 Aligned_cols=81 Identities=12% Similarity=0.131 Sum_probs=56.9
Q ss_pred CCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh--h
Q 029271 52 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--A 126 (196)
Q Consensus 52 ~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv--A 126 (196)
+..|+++..+.++ ....+.+.+.+++.|. ++-+...+..++...++++.+..++++-+|........ ..+ .
T Consensus 62 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~l 137 (339)
T 3h5o_A 62 SRTVLVLIPSLANTVFLETLTGIETVLDAAGY--QMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE--PFERIL 137 (339)
T ss_dssp -CEEEEEESCSTTCTTHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT--THHHHH
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH--HHHHHH
Confidence 4579999877655 5677888889999986 56677788889988899998888888755544322221 222 2
Q ss_pred hccCCcEEEe
Q 029271 127 ANSQILVIRV 136 (196)
Q Consensus 127 ~~t~~PVIgv 136 (196)
....+||+-+
T Consensus 138 ~~~~iPvV~~ 147 (339)
T 3h5o_A 138 SQHALPVVYM 147 (339)
T ss_dssp HHTTCCEEEE
T ss_pred hcCCCCEEEE
Confidence 3457898876
No 42
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=94.52 E-value=0.67 Score=37.50 Aligned_cols=83 Identities=6% Similarity=0.085 Sum_probs=51.3
Q ss_pred CCCeEEEEEcCCCC-----HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh
Q 029271 51 DAPIVGIIMESDLD-----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 51 ~~~~V~IimGS~SD-----~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv 125 (196)
.+..|++++.+.+| ....+.+.+.++++|. ++-+......++...++.+.+..++++-+|........ ..+
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~~ 82 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQY--HLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPND--PRV 82 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSC--EEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTC--HHH
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCC--EEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCc--HHH
Confidence 35689999987665 2445556666777775 66666666666666667666767788755554322221 222
Q ss_pred h--hccCCcEEEec
Q 029271 126 A--ANSQILVIRVP 137 (196)
Q Consensus 126 A--~~t~~PVIgvP 137 (196)
. -...+|||.+=
T Consensus 83 ~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 83 RFMTERNMPFVTHG 96 (288)
T ss_dssp HHHHHTTCCEEEES
T ss_pred HHHhhCCCCEEEEC
Confidence 2 23578988654
No 43
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=94.42 E-value=0.69 Score=37.09 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=56.3
Q ss_pred CCCeEEEEEcC-----CCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh
Q 029271 51 DAPIVGIIMES-----DLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 122 (196)
Q Consensus 51 ~~~~V~IimGS-----~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~ 122 (196)
.+.+|++++.+ .++. ...+.+.+.++++|. ++.+...+..++...++++.+..++++-+|........
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~-- 82 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGY--ALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND-- 82 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTC--EEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC--
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh--
Confidence 45689999987 4442 556677788888986 56667777777777888888888888766665443322
Q ss_pred Hhhh--hccCCcEEEec
Q 029271 123 GVAA--ANSQILVIRVP 137 (196)
Q Consensus 123 gvvA--~~t~~PVIgvP 137 (196)
..+. ....+|||.+=
T Consensus 83 ~~~~~l~~~~iPvV~~~ 99 (292)
T 3k4h_A 83 RIIQYLHEQNFPFVLIG 99 (292)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHCCCCEEEEC
Confidence 2222 24578888763
No 44
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=94.38 E-value=1.2 Score=36.84 Aligned_cols=82 Identities=11% Similarity=0.122 Sum_probs=53.2
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh-
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 127 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~- 127 (196)
+..|++++...++- ...+.+.+.+++.|. ++-+...+..++...++++.+..++++-+|....... ...+.-
T Consensus 63 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~--~~~~~~l 138 (332)
T 2o20_A 63 TTTVGVILPTITSTYFAAITRGVDDIASMYKY--NMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLD--EKIRTSL 138 (332)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSSCCC--HHHHHHH
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCCCCC--HHHHHHH
Confidence 45799999766553 345566777788886 5555666777777778888887888876665543221 122221
Q ss_pred -ccCCcEEEec
Q 029271 128 -NSQILVIRVP 137 (196)
Q Consensus 128 -~t~~PVIgvP 137 (196)
....||+.+-
T Consensus 139 ~~~~iPvV~~~ 149 (332)
T 2o20_A 139 KNSRTPVVLVG 149 (332)
T ss_dssp HHHCCCEEEES
T ss_pred HhCCCCEEEEc
Confidence 3568888763
No 45
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=94.33 E-value=1.6 Score=36.01 Aligned_cols=86 Identities=12% Similarity=0.089 Sum_probs=57.6
Q ss_pred CCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCC--CeEEEEecCCCCchhHhh
Q 029271 51 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG--IKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 51 ~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~--~~V~IavAG~sa~L~gvv 125 (196)
.+.+|+++..+.++- ...+.+.+.+++.|+.+ .+......++...++++.+..++ ++-||........+...+
T Consensus 4 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~l--~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~~~~~ 81 (332)
T 2rjo_A 4 GQTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLPY--VPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADARVIV 81 (332)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCCE--EEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCSSHHHHHHHH
T ss_pred CccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCEE--EEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCCCHHHHHHHH
Confidence 456899999876663 45567777888999754 45566677777777888887778 887776554433333333
Q ss_pred hh--ccCCcEEEecC
Q 029271 126 AA--NSQILVIRVPL 138 (196)
Q Consensus 126 A~--~t~~PVIgvP~ 138 (196)
.- ....||+.+-.
T Consensus 82 ~~~~~~~iPvV~~~~ 96 (332)
T 2rjo_A 82 EACSKAGAYVTTIWN 96 (332)
T ss_dssp HHHHHHTCEEEEESC
T ss_pred HHHHHCCCeEEEECC
Confidence 22 35689987643
No 46
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=94.27 E-value=0.0041 Score=54.97 Aligned_cols=85 Identities=12% Similarity=0.079 Sum_probs=60.1
Q ss_pred CeEEEEEcCCCCHHH-HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCC-CCchhHhhhhccC
Q 029271 53 PIVGIIMESDLDLPV-MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQ 130 (196)
Q Consensus 53 ~~V~IimGS~SD~~~-~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~-sa~L~gvvA~~t~ 130 (196)
.++.||++....... .+++.+.|++.| +++.+.+-+.+.+.+.+..+.+.. ++++||++.|+ ..-++..+|-...
T Consensus 42 ~~~liVtd~~~~~~~~~~~v~~~L~~~g--~~~~~~~ge~~~~~v~~~~~~~~~-~~d~IIavGGGsv~D~aK~iA~~~~ 118 (376)
T 1kq3_A 42 ERAFVVIDDFVDKNVLGENFFSSFTKVR--VNKQIFGGECSDEEIERLSGLVEE-ETDVVVGIGGGKTLDTAKAVAYKLK 118 (376)
T ss_dssp SEEEEEECHHHHHHTTCTTGGGGCSSSE--EEEEECCSSCBHHHHHHHHTTCCT-TCCEEEEEESHHHHHHHHHHHHHTT
T ss_pred CeEEEEECccHHhhccHHHHHHHHHHcC--CeEEEeCCCCCHHHHHHHHHHHhc-CCCEEEEeCCcHHHHHHHHHHHhcC
Confidence 589999975432222 445555555555 344444445555677777777777 88999999886 5569999998899
Q ss_pred CcEEEecCCC
Q 029271 131 ILVIRVPLLS 140 (196)
Q Consensus 131 ~PVIgvP~~~ 140 (196)
+|+|.||+..
T Consensus 119 ~p~i~IPTTa 128 (376)
T 1kq3_A 119 KPVVIVPTIA 128 (376)
T ss_dssp CCEEEEESSC
T ss_pred CCEEEecCcc
Confidence 9999999975
No 47
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=94.24 E-value=1.1 Score=36.27 Aligned_cols=82 Identities=6% Similarity=-0.029 Sum_probs=54.0
Q ss_pred CCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHH---HHHHHhhCCCeEEEEecCCCCchhHhh
Q 029271 52 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS---YALSAKERGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 52 ~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~---~~~~~e~~~~~V~IavAG~sa~L~gvv 125 (196)
+.+|+++....+| ....+.+.+.+++.|. ++-+......++...+ +++.+..++++-+|....... ...+
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~--~~~~ 83 (290)
T 2rgy_A 8 LGIIGLFVPTFFGSYYGTILKQTDLELRAVHR--HVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDLH--DEDL 83 (290)
T ss_dssp CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTC--EEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSSC--HHHH
T ss_pred CCeEEEEeCCCCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCCC--HHHH
Confidence 4589999876655 3455667777888886 5556666667777777 788887888876666544333 2232
Q ss_pred h--hccCCcEEEec
Q 029271 126 A--ANSQILVIRVP 137 (196)
Q Consensus 126 A--~~t~~PVIgvP 137 (196)
. .....||+.+-
T Consensus 84 ~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 84 DELHRMHPKMVFLN 97 (290)
T ss_dssp HHHHHHCSSEEEES
T ss_pred HHHhhcCCCEEEEc
Confidence 2 23568998763
No 48
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=94.13 E-value=0.016 Score=50.93 Aligned_cols=85 Identities=18% Similarity=0.111 Sum_probs=63.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHHhhCCC---eEEEEecCC-CCchhHhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVA 125 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~e~~~~---~V~IavAG~-sa~L~gvv 125 (196)
.++.||++......+.+++.+.|+..++ ++.+.. .|++.+.+.++.+.+.+.++ +++||+.|+ ..-+++++
T Consensus 27 ~~~livtd~~v~~~~~~~v~~~L~~~~~--~~~~~~~~e~~k~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~ak~~ 104 (343)
T 3clh_A 27 QKALIISDSIVAGLHLPYLLERLKALEV--RVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFA 104 (343)
T ss_dssp SCEEEEEEHHHHTTTHHHHHTTEECSCE--EEEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhCCc--EEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCceEEEECChHHHHHHHHH
Confidence 4799998764433356666666654443 433332 57889999999999999889 999999887 46699999
Q ss_pred h--hccCCcEEEecCC
Q 029271 126 A--ANSQILVIRVPLL 139 (196)
Q Consensus 126 A--~~t~~PVIgvP~~ 139 (196)
| .....|+|.||+.
T Consensus 105 A~~~~rgip~i~IPTT 120 (343)
T 3clh_A 105 SSIYFRGIDFINIPTT 120 (343)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHhccCCCEEEeCCc
Confidence 9 4678999999997
No 49
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=94.09 E-value=1.4 Score=36.45 Aligned_cols=79 Identities=11% Similarity=0.140 Sum_probs=52.7
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 128 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~ 128 (196)
+..|++++...++- ...+.+.+.+++.|. ++-+...+..++...++++.+..++++-+| ....... ..+ ..
T Consensus 60 ~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI-~~~~~~~--~~l-~~ 133 (330)
T 3ctp_A 60 SKTIGLMVPNISNPFFNQMASVIEEYAKNKGY--TLFLCNTDDDKEKEKTYLEVLQSHRVAGII-ASRSQCE--DEY-AN 133 (330)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEE-EETCCCS--GGG-TT
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEE-ECCCCCH--HHH-Hh
Confidence 45799999776553 345667777788886 455566677777777888888888898777 5433221 122 24
Q ss_pred cCCcEEEe
Q 029271 129 SQILVIRV 136 (196)
Q Consensus 129 t~~PVIgv 136 (196)
..+||+.+
T Consensus 134 ~~iPvV~~ 141 (330)
T 3ctp_A 134 IDIPVVAF 141 (330)
T ss_dssp CCSCEEEE
T ss_pred cCCCEEEE
Confidence 56788865
No 50
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=93.95 E-value=0.4 Score=39.02 Aligned_cols=81 Identities=11% Similarity=0.067 Sum_probs=56.2
Q ss_pred CCCeEEEEEcCCCC----HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh-
Q 029271 51 DAPIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA- 125 (196)
Q Consensus 51 ~~~~V~IimGS~SD----~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv- 125 (196)
.+..|++++.+.++ ....+.+.+.++++|. ++-+...+..++...++++.+..++++-+|........ .+
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~---~~~ 86 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGK--TILIANTGGSSEREVEIWKMFQSHRIDGVLYVTMYRRI---VDP 86 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEEEEEEE---CCC
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEecCCccH---HHH
Confidence 35689999977665 2788889999999986 56667778888888889998888888655544322221 11
Q ss_pred -hhccCCcEEEe
Q 029271 126 -AANSQILVIRV 136 (196)
Q Consensus 126 -A~~t~~PVIgv 136 (196)
.....+|||.+
T Consensus 87 ~~~~~~iPvV~~ 98 (301)
T 3miz_A 87 ESGDVSIPTVMI 98 (301)
T ss_dssp CCTTCCCCEEEE
T ss_pred HHHhCCCCEEEE
Confidence 12346787765
No 51
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=93.93 E-value=2 Score=34.38 Aligned_cols=85 Identities=12% Similarity=0.086 Sum_probs=60.7
Q ss_pred CCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 51 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 51 ~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
.+.+|++++.+.++- ...+.+.+.++++|+ ++.+...+..++...++++.+..++++-||........+...+.-
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~ 84 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKY--EALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEE 84 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHH
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHH
Confidence 346899999887773 445667778888886 566677788888888899988888898777666555555444433
Q ss_pred --ccCCcEEEec
Q 029271 128 --NSQILVIRVP 137 (196)
Q Consensus 128 --~t~~PVIgvP 137 (196)
...+||+.+=
T Consensus 85 ~~~~~iPvV~~~ 96 (293)
T 3l6u_A 85 AKKAGIPVFAID 96 (293)
T ss_dssp HHHTTCCEEEES
T ss_pred HHHcCCCEEEec
Confidence 3578998763
No 52
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=93.88 E-value=2 Score=34.27 Aligned_cols=84 Identities=10% Similarity=0.120 Sum_probs=55.6
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC-CchhHhhhh
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAA 127 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a~L~gvvA~ 127 (196)
+.+|++++.+.++- ...+.+.+.+++.|. ++.+......++...++++.+..++++-+|...... ..+-..+..
T Consensus 7 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~l~~ 84 (289)
T 1dbq_A 7 TKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEE 84 (289)
T ss_dssp -CEEEEEESCTTSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHH
T ss_pred CCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEeccCCHHHHHHHHh
Confidence 45899999766552 345667777888886 555566777888888888888888887666654433 233333432
Q ss_pred ccCCcEEEec
Q 029271 128 NSQILVIRVP 137 (196)
Q Consensus 128 ~t~~PVIgvP 137 (196)
....|||.+-
T Consensus 85 ~~~iPvV~~~ 94 (289)
T 1dbq_A 85 YRHIPMVVMD 94 (289)
T ss_dssp TTTSCEEEEE
T ss_pred ccCCCEEEEc
Confidence 3578988763
No 53
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=93.86 E-value=1.2 Score=35.99 Aligned_cols=81 Identities=6% Similarity=0.037 Sum_probs=50.8
Q ss_pred CCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 51 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 51 ~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
.+..|++++ +.++- ...+.+.+.+++.|. ++-+...+..++ -.++++.+..++++-+|........ ..+..
T Consensus 11 ~~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~-~~~~~~~l~~~~vdgiIi~~~~~~~--~~~~~ 84 (289)
T 3k9c_A 11 SSRLLGVVF-ELQQPFHGDLVEQIYAAATRRGY--DVMLSAVAPSRA-EKVAVQALMRERCEAAILLGTRFDT--DELGA 84 (289)
T ss_dssp --CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTC--EEEEEEEBTTBC-HHHHHHHHTTTTEEEEEEETCCCCH--HHHHH
T ss_pred CCCEEEEEE-ecCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHH-HHHHHHHHHhCCCCEEEEECCCCCH--HHHHH
Confidence 345899999 65552 345667777888885 556666666666 6677788877888766665543332 22221
Q ss_pred -ccCCcEEEec
Q 029271 128 -NSQILVIRVP 137 (196)
Q Consensus 128 -~t~~PVIgvP 137 (196)
...+|||-+=
T Consensus 85 ~~~~iPvV~i~ 95 (289)
T 3k9c_A 85 LADRVPALVVA 95 (289)
T ss_dssp HHTTSCEEEES
T ss_pred HHcCCCEEEEc
Confidence 1278988753
No 54
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=93.85 E-value=2 Score=34.26 Aligned_cols=110 Identities=12% Similarity=0.109 Sum_probs=70.3
Q ss_pred CCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 51 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 51 ~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
.+..|++++.+.+|- ...+.+.+.+++.|+ ++-+...+..++...++++.+..++++-+|...... ...+.-
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~---~~~~~~ 80 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRGY--IGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN---PQTVQE 80 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTC--EEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC---HHHHHH
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc---HHHHHH
Confidence 345899999887663 445566677778875 666777888888888899988888897666654443 444433
Q ss_pred --ccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHc
Q 029271 128 --NSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLG 180 (196)
Q Consensus 128 --~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa 180 (196)
...+|||.+=... ++.++..|+.|+..++.+++-.++.
T Consensus 81 l~~~~iPvV~i~~~~---------------~~~~~~~V~~D~~~~g~~a~~~L~~ 120 (276)
T 3jy6_A 81 ILHQQMPVVSVDREM---------------DACPWPQVVTDNFEAAKAATTAFRQ 120 (276)
T ss_dssp HHTTSSCEEEESCCC---------------TTCSSCEEECCHHHHHHHHHHHHHT
T ss_pred HHHCCCCEEEEeccc---------------CCCCCCEEEEChHHHHHHHHHHHHH
Confidence 3578988763221 1112345666665555554444443
No 55
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=93.77 E-value=0.9 Score=36.70 Aligned_cols=82 Identities=5% Similarity=0.038 Sum_probs=53.2
Q ss_pred CCeEEEEEcC-C---CC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh
Q 029271 52 APIVGIIMES-D---LD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 124 (196)
Q Consensus 52 ~~~V~IimGS-~---SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv 124 (196)
+..|++++.. . ++ ....+.+.+.+++.|. ++.+......++...++++.+..++++-+|........ ..
T Consensus 4 s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~ 79 (287)
T 3bbl_A 4 SFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNY--FVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYND--PR 79 (287)
T ss_dssp CCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTC--EEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTC--HH
T ss_pred eeEEEEEecccccccCChhHHHHHHHHHHHHHHcCC--EEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCCc--HH
Confidence 3578888765 3 33 4667778888889985 55566666666666777777777888766665443222 22
Q ss_pred hh--hccCCcEEEec
Q 029271 125 AA--ANSQILVIRVP 137 (196)
Q Consensus 125 vA--~~t~~PVIgvP 137 (196)
+. .....|||.+-
T Consensus 80 ~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 80 VQFLLKQKFPFVAFG 94 (287)
T ss_dssp HHHHHHTTCCEEEES
T ss_pred HHHHHhcCCCEEEEC
Confidence 21 23568998763
No 56
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=93.74 E-value=1 Score=36.75 Aligned_cols=83 Identities=10% Similarity=0.100 Sum_probs=55.9
Q ss_pred CCCeEEEEEcC-----CCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh
Q 029271 51 DAPIVGIIMES-----DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 122 (196)
Q Consensus 51 ~~~~V~IimGS-----~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~ 122 (196)
.+..|++++.+ .++ ....+.+.+.++++|. ++-+...+..++...++++.+..++++-+|........
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-- 96 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGY--STRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDD-- 96 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTC--EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTC--
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCc--
Confidence 35689999987 444 3456677788888986 56667777777777888888888889766655433222
Q ss_pred Hhhh--hccCCcEEEec
Q 029271 123 GVAA--ANSQILVIRVP 137 (196)
Q Consensus 123 gvvA--~~t~~PVIgvP 137 (196)
..+. ....+|||.+=
T Consensus 97 ~~~~~l~~~~iPvV~i~ 113 (305)
T 3huu_A 97 PIEHLLNEFKVPYLIVG 113 (305)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 2222 23578888763
No 57
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=93.73 E-value=1.3 Score=35.72 Aligned_cols=81 Identities=10% Similarity=0.101 Sum_probs=53.5
Q ss_pred CCCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC-C-chhHhh
Q 029271 51 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-A-HLSGVA 125 (196)
Q Consensus 51 ~~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s-a-~L~gvv 125 (196)
.+.+|++++...++ ....+.+.+.+++.|. ++.+......++...++++.+..++++-+|...... . .+. -+
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~-~l 83 (285)
T 3c3k_A 7 KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGY--RILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSELPELQ-NI 83 (285)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGGHHHHH-HH
T ss_pred CCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCChHHHH-HH
Confidence 34589999977666 2455667777888886 455566666777777788888788887666654432 1 122 22
Q ss_pred hhccCCcEEEe
Q 029271 126 AANSQILVIRV 136 (196)
Q Consensus 126 A~~t~~PVIgv 136 (196)
. ...||+.+
T Consensus 84 ~--~~iPvV~~ 92 (285)
T 3c3k_A 84 I--GAFPWVQC 92 (285)
T ss_dssp H--TTSSEEEE
T ss_pred h--cCCCEEEE
Confidence 2 57888876
No 58
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=93.61 E-value=0.9 Score=38.24 Aligned_cols=126 Identities=13% Similarity=0.119 Sum_probs=71.4
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-- 126 (196)
+..|+++....++- ...+.+.+.+++.|... -+......++...++++.+..++++-||....... ...+.
T Consensus 66 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~--~~~~~~l 141 (348)
T 3bil_A 66 SNTIGVIVPSLINHYFAAMVTEIQSTASKAGLAT--IITNSNEDATTMSGSLEFLTSHGVDGIICVPNEEC--ANQLEDL 141 (348)
T ss_dssp --CEEEEESCSSSHHHHHHHHHHHHHHHHTTCCE--EEEECTTCHHHHHHHHHHHHHTTCSCEEECCCGGG--HHHHHHH
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCEE--EEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC--hHHHHHH
Confidence 34799999766653 45567777888888754 45556667777778888888888875555443222 12222
Q ss_pred hccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc------------CCHHHHHHHHHHH
Q 029271 127 ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI------------ADEDLLERIRKYV 194 (196)
Q Consensus 127 ~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~------------~d~~l~~kl~~~r 194 (196)
....+||+.+-.... ...++..|++|+..++-+++-.++.. ......+|++.|+
T Consensus 142 ~~~~iPvV~i~~~~~--------------~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~ 207 (348)
T 3bil_A 142 QKQGMPVVLVDRELP--------------GDSTIPTATSNPQPGIAAAVELLAHNNALPIGYLSGPMDTSTGRERLEDFK 207 (348)
T ss_dssp HHC-CCEEEESSCCS--------------CC-CCCEEEEECHHHHHHHHHHHHHTTCCSEEEECCCTTSHHHHHHHHHHH
T ss_pred HhCCCCEEEEcccCC--------------CCCCCCEEEeChHHHHHHHHHHHHHCCCCeEEEEeCCCCCccHHHHHHHHH
Confidence 235688887632110 00123456667766555544444332 1234466777776
Q ss_pred h
Q 029271 195 E 195 (196)
Q Consensus 195 ~ 195 (196)
+
T Consensus 208 ~ 208 (348)
T 3bil_A 208 A 208 (348)
T ss_dssp H
T ss_pred H
Confidence 4
No 59
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=93.56 E-value=1.5 Score=35.16 Aligned_cols=83 Identities=14% Similarity=0.066 Sum_probs=59.1
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccC--CchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQ--NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 126 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR--~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA 126 (196)
+.+|++++.+.+|- ...+.+.+.++++|+ ++.+...+. .++.-.++++.+..++++.||........+...+.
T Consensus 5 ~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~ 82 (304)
T 3o1i_D 5 DEKICAIYPHLKDSYWLSVNYGMVSEAEKQGV--NLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHAYEHNLK 82 (304)
T ss_dssp CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTC--EEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTSSTTTHH
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--eEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHH
Confidence 45899999887773 445667777888886 566677777 77888888888888889877766655554444443
Q ss_pred hc-cCCcEEEe
Q 029271 127 AN-SQILVIRV 136 (196)
Q Consensus 127 ~~-t~~PVIgv 136 (196)
-. ..+|||.+
T Consensus 83 ~~~~~iPvV~~ 93 (304)
T 3o1i_D 83 SWVGNTPVFAT 93 (304)
T ss_dssp HHTTTSCEEEC
T ss_pred HHcCCCCEEEe
Confidence 22 57898876
No 60
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=93.55 E-value=1.3 Score=35.94 Aligned_cols=125 Identities=13% Similarity=0.110 Sum_probs=70.7
Q ss_pred CCCeEEEEEc----CCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhH
Q 029271 51 DAPIVGIIME----SDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 123 (196)
Q Consensus 51 ~~~~V~IimG----S~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~g 123 (196)
.+..|++++. +.++ ....+.+.+.+++.|....+ ...+. ++...++++.+..++++-+|........ .
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~--~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~~~~~--~ 79 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLL--IPDEP-GEKYQSLIHLVETRRVDALIVAHTQPED--F 79 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEE--EEECT-TCCCHHHHHHHHHTCCSEEEECSCCSSC--H
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEE--EeCCC-hhhHHHHHHHHHcCCCCEEEEeCCCCCh--H
Confidence 3458999997 4444 34566777888889875444 44443 5555667777777788755555443332 2
Q ss_pred hhh--hccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccC------------CHHHHHH
Q 029271 124 VAA--ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIA------------DEDLLER 189 (196)
Q Consensus 124 vvA--~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~------------d~~l~~k 189 (196)
.+. ....+||+.+=... ++.++..|++||-.++.+++-.++... .....+|
T Consensus 80 ~~~~l~~~~iPvV~~~~~~---------------~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R 144 (294)
T 3qk7_A 80 RLQYLQKQNFPFLALGRSH---------------LPKPYAWFDFDNHAGASLAVKRLLELGHQRIAFVSTDARISYVDQR 144 (294)
T ss_dssp HHHHHHHTTCCEEEESCCC---------------CSSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEEESSCCHHHHHH
T ss_pred HHHHHHhCCCCEEEECCCC---------------CCCCCCEEEcChHHHHHHHHHHHHHCCCceEEEEeCCcccchHHHH
Confidence 222 23568888653321 112245566676655555554444432 2334566
Q ss_pred HHHHHh
Q 029271 190 IRKYVE 195 (196)
Q Consensus 190 l~~~r~ 195 (196)
++.|++
T Consensus 145 ~~Gf~~ 150 (294)
T 3qk7_A 145 LQGYVQ 150 (294)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 61
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=93.55 E-value=2.3 Score=33.90 Aligned_cols=85 Identities=11% Similarity=0.103 Sum_probs=56.5
Q ss_pred CCCeEEEEEcCCC--CH---HHHHHHHHHHHHhCCCeEEEEEcc--cCCchHHHHHHHHHhhCCCeEEEEecCCCCchhH
Q 029271 51 DAPIVGIIMESDL--DL---PVMNDAARTLSDFGVPYEIKILPP--HQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 123 (196)
Q Consensus 51 ~~~~V~IimGS~S--D~---~~~~~~~~~l~~~gi~~ev~V~Sa--HR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~g 123 (196)
.+.+|++++.+.+ |. ...+.+.+.+++.|. ++.+... +..+++..++++.+..++++-+|........+..
T Consensus 4 ~~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~ 81 (289)
T 3brs_A 4 KQYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEI--KLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYD 81 (289)
T ss_dssp -CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTC--EEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHH
T ss_pred CCcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCC--EEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhHH
Confidence 3468999987765 42 344566777888885 5555554 6777777788888888889877766655555434
Q ss_pred hhhh--ccCCcEEEec
Q 029271 124 VAAA--NSQILVIRVP 137 (196)
Q Consensus 124 vvA~--~t~~PVIgvP 137 (196)
.+.- ....|||.+-
T Consensus 82 ~~~~~~~~~iPvV~~~ 97 (289)
T 3brs_A 82 AAKEIKDAGIKLIVID 97 (289)
T ss_dssp HHTTTGGGTCEEEEES
T ss_pred HHHHHHHCCCcEEEEC
Confidence 4432 3568988763
No 62
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=93.53 E-value=2.4 Score=34.13 Aligned_cols=85 Identities=8% Similarity=-0.015 Sum_probs=58.0
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEE-EcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V-~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
..+|+++.-+.++- ...+.+.+.++++|+.. .+ ...+..+++..++++.+..++++-+|........+...+.-
T Consensus 4 ~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~--~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~ 81 (305)
T 3g1w_A 4 NETYMMITFQSGMDYWKRCLKGFEDAAQALNVTV--EYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINK 81 (305)
T ss_dssp -CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEE--EEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHH
T ss_pred CceEEEEEccCCChHHHHHHHHHHHHHHHcCCEE--EEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHH
Confidence 35788888665553 34556777788898754 44 46778888888899988888898777665555555555532
Q ss_pred --ccCCcEEEecC
Q 029271 128 --NSQILVIRVPL 138 (196)
Q Consensus 128 --~t~~PVIgvP~ 138 (196)
....|||.+-.
T Consensus 82 ~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 82 AVDAGIPIVLFDS 94 (305)
T ss_dssp HHHTTCCEEEESS
T ss_pred HHHCCCcEEEECC
Confidence 35789987643
No 63
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=93.44 E-value=0.053 Score=48.50 Aligned_cols=86 Identities=10% Similarity=0.029 Sum_probs=60.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEE-EEEcccCCchHHHHHHHHHhhCC---CeEEEEecCCCCc-hhHhhhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERG---IKIIIVGDGVEAH-LSGVAAA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev-~V~SaHR~p~~~~~~~~~~e~~~---~~V~IavAG~sa~-L~gvvA~ 127 (196)
.++.||++..--- ....+.|+.-|+.+.+ .-...+.+.+.+.+.++.+.+.+ +++||++.|+|.. ++..+|.
T Consensus 54 ~~~liVtd~~~~~---~~l~~~L~~~g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~iD~AK~iA~ 130 (375)
T 3rf7_A 54 DFVVFLVDDVHQH---KPLAARVPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGGGSTMDLAKAVSL 130 (375)
T ss_dssp CCEEEEEEGGGTT---SHHHHHSCCCTTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEESHHHHHHHHHHHH
T ss_pred CeEEEEECchhhh---hHHHHHHHhcCCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHH
Confidence 4677887643211 1344455555777643 12347788889999988888777 8999999999754 7888877
Q ss_pred cc------------------CCcEEEecCCCC
Q 029271 128 NS------------------QILVIRVPLLSE 141 (196)
Q Consensus 128 ~t------------------~~PVIgvP~~~~ 141 (196)
.. .+|+|.||+..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTag 162 (375)
T 3rf7_A 131 MLTNPGSSSEYQGWDLIKNPAVHHIGIPTVSG 162 (375)
T ss_dssp HTSSCSCGGGGCEESCCCSCCCCEEEEESSCS
T ss_pred HHhCCCCHHHhhccccccCCCCCEEEEcCCCc
Confidence 65 689999999753
No 64
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=93.42 E-value=2.7 Score=34.29 Aligned_cols=82 Identities=16% Similarity=0.148 Sum_probs=53.6
Q ss_pred eEEEEEcCCCC--HHHHHHHHHHHHHhCCCeEEEEEc-ccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh--c
Q 029271 54 IVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--N 128 (196)
Q Consensus 54 ~V~IimGS~SD--~~~~~~~~~~l~~~gi~~ev~V~S-aHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~--~ 128 (196)
+|+++....++ ....+.+.+.++++|+. +.+.. ....+++..++++.+..++++.+|.....+..+...+.- .
T Consensus 3 ~Ig~i~~~~~~~~~~~~~gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~ 80 (313)
T 2h3h_A 3 TIGVIGKSVHPYWSQVEQGVKAAGKALGVD--TKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKALE 80 (313)
T ss_dssp EEEEECSCSSHHHHHHHHHHHHHHHHHTCE--EEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHH
T ss_pred EEEEEeCCCcHHHHHHHHHHHHHHHHcCCE--EEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHH
Confidence 67888766554 23445566777888964 44543 366777777888888888898777766555544444432 3
Q ss_pred cCCcEEEec
Q 029271 129 SQILVIRVP 137 (196)
Q Consensus 129 t~~PVIgvP 137 (196)
...|||.+=
T Consensus 81 ~~iPvV~~~ 89 (313)
T 2h3h_A 81 MGIPVVTLD 89 (313)
T ss_dssp TTCCEEEES
T ss_pred CCCeEEEeC
Confidence 568998763
No 65
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=93.38 E-value=2.5 Score=33.80 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=55.3
Q ss_pred CeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--h
Q 029271 53 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--A 127 (196)
Q Consensus 53 ~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA--~ 127 (196)
.+|+++....++ ....+.+.+.+++.|+ ++.+......+++..++++.+..++++-+|........+...+. .
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~ 80 (290)
T 2fn9_A 3 GKMAIVISTLNNPWFVVLAETAKQRAEQLGY--EATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAK 80 (290)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHH
T ss_pred eEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHH
Confidence 478999876655 2445566777888886 55566666677777788888877888877766544444333332 2
Q ss_pred ccCCcEEEec
Q 029271 128 NSQILVIRVP 137 (196)
Q Consensus 128 ~t~~PVIgvP 137 (196)
....||+.+-
T Consensus 81 ~~~iPvV~~~ 90 (290)
T 2fn9_A 81 EAGIPVFCVD 90 (290)
T ss_dssp HTTCCEEEES
T ss_pred HCCCeEEEEe
Confidence 3568998763
No 66
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=93.14 E-value=2.8 Score=33.73 Aligned_cols=127 Identities=13% Similarity=0.157 Sum_probs=76.5
Q ss_pred CCCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh-
Q 029271 51 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 126 (196)
Q Consensus 51 ~~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA- 126 (196)
.+.+|+++..+.++ ....+.+.+.+++.|+ ++-+...+..++...++++.+..++++-+|........ ...+.
T Consensus 19 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~-~~~~~~ 95 (293)
T 2iks_A 19 RTRSIGLVIPDLENTSYTRIANYLERQARQRGY--QLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPE-HPFYQR 95 (293)
T ss_dssp CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSCTT-CHHHHT
T ss_pred CCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc-HHHHHH
Confidence 34589999876666 3455667777888886 55566677777877788888888888766665443322 22222
Q ss_pred -hccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccC------------CHHHHHHHHHH
Q 029271 127 -ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIA------------DEDLLERIRKY 193 (196)
Q Consensus 127 -~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~------------d~~l~~kl~~~ 193 (196)
.....||+.+=..... ++ +..|+.|+..++.+++-.++... .....+|++.|
T Consensus 96 ~~~~~iPvV~~~~~~~~-------------~~--~~~V~~d~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf 160 (293)
T 2iks_A 96 WANDPFPIVALDRALDR-------------EH--FTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGF 160 (293)
T ss_dssp TTTSSSCEEEEESCCCT-------------TT--CEEEEECHHHHHHHHHHHHHTSCCSSEEEEEECTTSHHHHHHHHHH
T ss_pred HHhCCCCEEEECCccCc-------------CC--CCEEEecCHHHHHHHHHHHHHCCCCEEEEEecCcccccHHHHHHHH
Confidence 2346788876321110 12 34566677666655555554432 23345677777
Q ss_pred Hh
Q 029271 194 VE 195 (196)
Q Consensus 194 r~ 195 (196)
++
T Consensus 161 ~~ 162 (293)
T 2iks_A 161 RT 162 (293)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 67
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=93.08 E-value=1 Score=37.62 Aligned_cols=76 Identities=13% Similarity=0.108 Sum_probs=52.0
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 128 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~ 128 (196)
+..|+++..+.++. ...+.+.+.++++|. ++-+...+. ++...++++.+..++++-+|.... +. -...
T Consensus 64 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~----~~--~~~~ 134 (333)
T 3jvd_A 64 SALVGVIVPDLSNEYYSESLQTIQQDLKAAGY--QMLVAEANS-VQAQDVVMESLISIQAAGIIHVPV----VG--SIAP 134 (333)
T ss_dssp CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECCS-HHHHHHHHHHHHHHTCSEEEECCC----TT--CCC-
T ss_pred CCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEECCCC-hHHHHHHHHHHHhCCCCEEEEcch----HH--HHhh
Confidence 45799999887773 456677788888885 566666666 888888888888888876665443 11 1123
Q ss_pred cCCcEEEe
Q 029271 129 SQILVIRV 136 (196)
Q Consensus 129 t~~PVIgv 136 (196)
..+||+.+
T Consensus 135 ~~iPvV~~ 142 (333)
T 3jvd_A 135 EGIPMVQL 142 (333)
T ss_dssp CCSCEEEE
T ss_pred CCCCEEEE
Confidence 46777765
No 68
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=93.07 E-value=1.8 Score=34.26 Aligned_cols=81 Identities=10% Similarity=0.073 Sum_probs=51.8
Q ss_pred CCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--
Q 029271 52 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-- 126 (196)
+.+|+++....+| ....+.+.+.+++.|. ++.+......++...++++.+..++++-+|....... ...+.
T Consensus 3 s~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~--~~~~~~l 78 (275)
T 3d8u_A 3 AYSIALIIPSLFEKACAHFLPSFQQALNKAGY--QLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEHS--QRTHQLL 78 (275)
T ss_dssp -CEEEEEESCSSCHHHHHHHHHHHHHHHHTSC--EECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSCCC--HHHHHHH
T ss_pred ceEEEEEeCCCccccHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCC--HHHHHHH
Confidence 3579999876655 2455666777888886 4445556667777778888888888875554443222 12222
Q ss_pred hccCCcEEEe
Q 029271 127 ANSQILVIRV 136 (196)
Q Consensus 127 ~~t~~PVIgv 136 (196)
.....||+.+
T Consensus 79 ~~~~iPvV~~ 88 (275)
T 3d8u_A 79 EASNTPVLEI 88 (275)
T ss_dssp HHHTCCEEEE
T ss_pred HhCCCCEEEE
Confidence 2357899876
No 69
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=92.91 E-value=2.8 Score=34.81 Aligned_cols=84 Identities=10% Similarity=0.133 Sum_probs=54.8
Q ss_pred CCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCC-CCchhHhhh
Q 029271 51 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAA 126 (196)
Q Consensus 51 ~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~-sa~L~gvvA 126 (196)
.+..|++++...++. ...+.+.+.+++.|. ++-+...+..++...++++.+..++++-+|..... +..+-..+.
T Consensus 57 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~ 134 (340)
T 1qpz_A 57 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLE 134 (340)
T ss_dssp CCSEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHH
Confidence 345899999776553 345667777888886 55566677778887788888888888766654433 222333333
Q ss_pred hccCCcEEEe
Q 029271 127 ANSQILVIRV 136 (196)
Q Consensus 127 ~~t~~PVIgv 136 (196)
....+||+.+
T Consensus 135 ~~~~iPvV~~ 144 (340)
T 1qpz_A 135 EYRHIPMVVM 144 (340)
T ss_dssp TTTTSCEEEE
T ss_pred hhCCCCEEEE
Confidence 2246788765
No 70
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=92.83 E-value=0.91 Score=36.92 Aligned_cols=82 Identities=12% Similarity=0.137 Sum_probs=53.3
Q ss_pred CCeEEEEEcC-----CCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhH
Q 029271 52 APIVGIIMES-----DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 123 (196)
Q Consensus 52 ~~~V~IimGS-----~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~g 123 (196)
+..|++++.. .+| ....+.+.+.+++.|. ++-+...+..++...++++.+..++++-+|........ .
T Consensus 7 s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~--~ 82 (295)
T 3hcw_A 7 TYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGY--GTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEND--P 82 (295)
T ss_dssp SCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTC--EEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTTC--H
T ss_pred CcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCC--EEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcccCh--H
Confidence 4579999843 233 3556677788888886 56667777777777788888888888766654433221 2
Q ss_pred hhh--hccCCcEEEec
Q 029271 124 VAA--ANSQILVIRVP 137 (196)
Q Consensus 124 vvA--~~t~~PVIgvP 137 (196)
.+. ....+||+-+=
T Consensus 83 ~~~~l~~~~iPvV~i~ 98 (295)
T 3hcw_A 83 IKQMLIDESMPFIVIG 98 (295)
T ss_dssp HHHHHHHTTCCEEEES
T ss_pred HHHHHHhCCCCEEEEC
Confidence 222 24578988763
No 71
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=92.79 E-value=3.7 Score=34.12 Aligned_cols=84 Identities=12% Similarity=0.088 Sum_probs=59.2
Q ss_pred CCeEEEEEcCCCC----HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh--CCCeEEEEecCCCCchhHhh
Q 029271 52 APIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 52 ~~~V~IimGS~SD----~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~--~~~~V~IavAG~sa~L~gvv 125 (196)
.++|++++-+.++ ....+.+.+.++++|+. +.+......++...+.++++-. .+++.||... -.......+
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~--~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~~~~~~~~ 79 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLD--LRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQYVAPQIL 79 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCE--EEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CSSHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCe--EEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-chhhHHHHH
Confidence 3689999988877 35566777788889875 5555778888887788887777 4888666654 444555655
Q ss_pred hh--ccCCcEEEecC
Q 029271 126 AA--NSQILVIRVPL 138 (196)
Q Consensus 126 A~--~t~~PVIgvP~ 138 (196)
.- ...+|||.+=.
T Consensus 80 ~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 80 RLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHTTSCCEEEEEES
T ss_pred HHHHhCCCcEEEEcC
Confidence 43 45789987643
No 72
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=92.59 E-value=2.6 Score=36.96 Aligned_cols=129 Identities=13% Similarity=0.098 Sum_probs=76.1
Q ss_pred CCeEEEEEc-CCCC----HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEec-CCCCchhHhh
Q 029271 52 APIVGIIME-SDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD-GVEAHLSGVA 125 (196)
Q Consensus 52 ~~~V~IimG-S~SD----~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA-G~sa~L~gvv 125 (196)
+.+|++|+- +.+| ..+.+-+.+..+++|-.+++.++......+...+.++++..+|+++||+.. +....+--+.
T Consensus 26 ~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g~~~~~~~~~vA 105 (356)
T 3s99_A 26 KLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTSFGYMDPTVKVA 105 (356)
T ss_dssp CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECSGGGHHHHHHHH
T ss_pred CCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH
Confidence 347998884 4567 345566667778899667777665555555667888889889999887763 2333333333
Q ss_pred hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecC---ChhhHHHHHHHHH---------ccCCHHHHHHHHHH
Q 029271 126 AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN---NAKNAALYAVKVL---------GIADEDLLERIRKY 193 (196)
Q Consensus 126 A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~---~~~nAA~~AaqIL---------a~~d~~l~~kl~~~ 193 (196)
.-+...|++.|--.. . .+- +.++..+ +++-|+.+|+.+. +...+.+..++..|
T Consensus 106 ~~~Pdv~fv~id~~~------------~-~~N--v~sv~~~~~eg~ylaG~~A~~~tk~~kIGfVgg~~~p~v~~~~~GF 170 (356)
T 3s99_A 106 KKFPDVKFEHATGYK------------T-ADN--MSAYNARFYEGRYVQGVIAAKMSKKGIAGYIGSVPVPEVVQGINSF 170 (356)
T ss_dssp TTCTTSEEEEESCCC------------C-BTT--EEEEEECHHHHHHHHHHHHHHHCSSCEEEEEECCCCHHHHHHHHHH
T ss_pred HHCCCCEEEEEeccc------------c-CCc--EEEEEechhHHHHHHHHHHHHhcCCCEEEEECCCccHHHHHHHHHH
Confidence 333456677663211 0 111 4555445 3334444444432 23456777777777
Q ss_pred Hh
Q 029271 194 VE 195 (196)
Q Consensus 194 r~ 195 (196)
++
T Consensus 171 ~~ 172 (356)
T 3s99_A 171 ML 172 (356)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 73
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=92.58 E-value=3.5 Score=33.33 Aligned_cols=84 Identities=18% Similarity=0.176 Sum_probs=59.0
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEccc--CCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaH--R~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
.+|++++.+.++- ...+.+.+.++++|+ ++.+.... ..+++..+.++++..++++-||........+...+.-
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~ 81 (297)
T 3rot_A 4 DKYYLITHGSQDPYWTSLFQGAKKAAEELKV--DLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQR 81 (297)
T ss_dssp CEEEEECSCCCSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHH
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHHhCc--EEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHH
Confidence 4789998877553 344566677788886 55566655 6888888899998888998777666656665665533
Q ss_pred --ccCCcEEEecC
Q 029271 128 --NSQILVIRVPL 138 (196)
Q Consensus 128 --~t~~PVIgvP~ 138 (196)
....|||.+=.
T Consensus 82 ~~~~giPvV~~~~ 94 (297)
T 3rot_A 82 ANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHTCCEEEESC
T ss_pred HHHCCCCEEEEcC
Confidence 35789987643
No 74
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=92.56 E-value=0.85 Score=37.28 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=60.9
Q ss_pred CeEEEEEcCCCC---HHHHHHHHHHHHHhCC---CeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh
Q 029271 53 PIVGIIMESDLD---LPVMNDAARTLSDFGV---PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 126 (196)
Q Consensus 53 ~~V~IimGS~SD---~~~~~~~~~~l~~~gi---~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA 126 (196)
..|+|+. +.++ -+..+.+.+.|++.|. ...+-++..+..+++..++++.+.+++++.||+.. .. +...+..
T Consensus 3 ~~Igvi~-~~~~p~~~~i~~gi~~~l~~~gy~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~-~~-~~~~~~~ 79 (295)
T 3lft_A 3 AKIGVLQ-FVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIA-TP-AAQGLAS 79 (295)
T ss_dssp EEEEEEE-CSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEES-HH-HHHHHHH
T ss_pred eEEEEEE-ccCChhHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC-cH-HHHHHHH
Confidence 4688883 3343 3456778888999998 87888899999999999999999988898888764 22 2222333
Q ss_pred hccCCcEEEecC
Q 029271 127 ANSQILVIRVPL 138 (196)
Q Consensus 127 ~~t~~PVIgvP~ 138 (196)
.....||+-|-.
T Consensus 80 ~~~~iPvV~~~~ 91 (295)
T 3lft_A 80 ATKDLPVIMAAI 91 (295)
T ss_dssp HCSSSCEEEESC
T ss_pred cCCCCCEEEEec
Confidence 346789998754
No 75
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=92.44 E-value=3.4 Score=32.94 Aligned_cols=88 Identities=9% Similarity=0.053 Sum_probs=60.2
Q ss_pred CCCeEEEEEcCC-CC---HHHHHHHHHHHHHh-CCCeEEEEE-cccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh
Q 029271 51 DAPIVGIIMESD-LD---LPVMNDAARTLSDF-GVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 124 (196)
Q Consensus 51 ~~~~V~IimGS~-SD---~~~~~~~~~~l~~~-gi~~ev~V~-SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv 124 (196)
.+.+|++++.+. ++ ....+.+.+.+++. |....+... ..+..++...++++.+..++++-||............
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~ 86 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGF 86 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHH
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHH
Confidence 345799988776 44 34455677777888 887777665 3567788888888888888898777765544444444
Q ss_pred hhh--ccCCcEEEecC
Q 029271 125 AAA--NSQILVIRVPL 138 (196)
Q Consensus 125 vA~--~t~~PVIgvP~ 138 (196)
+.- ...+|||.+-.
T Consensus 87 ~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 87 TDALNELGIPYIYIDS 102 (304)
T ss_dssp HHHHHHHTCCEEEESS
T ss_pred HHHHHHCCCeEEEEeC
Confidence 432 34789987653
No 76
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=92.20 E-value=1.2 Score=35.47 Aligned_cols=79 Identities=9% Similarity=0.068 Sum_probs=52.7
Q ss_pred CCCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 51 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 51 ~~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
.+.+|++++.+.++ ....+.+.+.++++|+ ++.+...+ .++...++++.+..++++-+| +..... ...+..
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~-~~~~~~~~~~~l~~~~vdgiI-~~~~~~--~~~~~~ 77 (280)
T 3gyb_A 4 RTQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGY--RLSVIDSL-TSQAGTDPITSALSMRPDGII-IAQDIP--DFTVPD 77 (280)
T ss_dssp CCCEEEEEESCTTSGGGHHHHHHHHHHHGGGTC--EEEEECSS-SSCSSSCHHHHHHTTCCSEEE-EESCC---------
T ss_pred ccCEEEEEeCCCCChHHHHHHHHHHHHHHHCCC--EEEEEeCC-CchHHHHHHHHHHhCCCCEEE-ecCCCC--hhhHhh
Confidence 34689999988776 5667777888888886 66677777 777777788888888898777 443322 223333
Q ss_pred ccCCcEEEe
Q 029271 128 NSQILVIRV 136 (196)
Q Consensus 128 ~t~~PVIgv 136 (196)
..+|||.+
T Consensus 78 -~~iPvV~~ 85 (280)
T 3gyb_A 78 -SLPPFVIA 85 (280)
T ss_dssp --CCCEEEE
T ss_pred -cCCCEEEE
Confidence 67787765
No 77
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=92.20 E-value=0.96 Score=33.48 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=42.0
Q ss_pred HHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCc-----hhHh---hhhccCCcEEEecCCC
Q 029271 69 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH-----LSGV---AAANSQILVIRVPLLS 140 (196)
Q Consensus 69 ~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~-----L~gv---vA~~t~~PVIgvP~~~ 140 (196)
+++.+.++..|++++..+.. - +-...+++.++..+++.||.++-+.++ |+++ +.-+++.||+-||...
T Consensus 86 ~~~~~~~~~~g~~~~~~v~~--G--~~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~~pVlvv~~~~ 161 (162)
T 1mjh_A 86 ENIKKELEDVGFKVKDIIVV--G--IPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRKN 161 (162)
T ss_dssp HHHHHHHHHTTCEEEEEEEE--E--CHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEEEECCCC
T ss_pred HHHHHHHHHcCCceEEEEcC--C--CHHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCCCCEEEEeCCC
Confidence 34445556679988877653 2 233445666666778876666543333 3333 3346899999999754
No 78
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=91.93 E-value=4.9 Score=33.58 Aligned_cols=81 Identities=10% Similarity=0.130 Sum_probs=55.5
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-- 126 (196)
+..|++++.+.++. ...+.+.+.+++.|. ++-+...+..++...++++.+..++++-+|........ ..+.
T Consensus 70 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~--~~~~~l 145 (355)
T 3e3m_A 70 SGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGL--QLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHTE--QTIRLL 145 (355)
T ss_dssp -CEEEEEESCSBCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCCH--HHHHHH
T ss_pred CCEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCH--HHHHHH
Confidence 45799999887764 355667777888886 56667788888888889988888888755554332221 2222
Q ss_pred hccCCcEEEe
Q 029271 127 ANSQILVIRV 136 (196)
Q Consensus 127 ~~t~~PVIgv 136 (196)
....+||+-+
T Consensus 146 ~~~~iPvV~i 155 (355)
T 3e3m_A 146 QRASIPIVEI 155 (355)
T ss_dssp HHCCSCEEEE
T ss_pred HhCCCCEEEE
Confidence 2457899876
No 79
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=91.89 E-value=3.1 Score=33.32 Aligned_cols=80 Identities=9% Similarity=0.162 Sum_probs=55.9
Q ss_pred CCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeE-EEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh
Q 029271 51 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 126 (196)
Q Consensus 51 ~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA 126 (196)
.+..|++++.+.++- ...+.+.+.++++|+ + +-+...+..++.-.++++.+..++++-+|... ..+-- .
T Consensus 9 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~---~~~~~--~ 81 (277)
T 3hs3_A 9 KSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGY--TALISFSTNSDVKKYQNAIINFENNNVDGIITSA---FTIPP--N 81 (277)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEEC---CCCCT--T
T ss_pred CCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCC--CEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcc---hHHHH--H
Confidence 356899999887763 455677777888886 6 66778888888888899988888897666554 22211 1
Q ss_pred hccCCcEEEec
Q 029271 127 ANSQILVIRVP 137 (196)
Q Consensus 127 ~~t~~PVIgvP 137 (196)
.....||+.+-
T Consensus 82 ~~~~iPvV~~~ 92 (277)
T 3hs3_A 82 FHLNTPLVMYD 92 (277)
T ss_dssp CCCSSCEEEES
T ss_pred HhCCCCEEEEc
Confidence 23467877653
No 80
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=91.85 E-value=2.1 Score=34.44 Aligned_cols=83 Identities=13% Similarity=0.124 Sum_probs=42.6
Q ss_pred CCCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEE-cccCCchHHHHHHHHHhhCCCeEEEEecCC-CC-chhHh
Q 029271 51 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGV-EA-HLSGV 124 (196)
Q Consensus 51 ~~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~-SaHR~p~~~~~~~~~~e~~~~~V~IavAG~-sa-~L~gv 124 (196)
.+.+|++++.+.++ ....+.+.+.+++.|+ ++.+. .....++...++++.+..++++-+|..... +. .+.-
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~- 83 (290)
T 3clk_A 7 SSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGY--NLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIALTDDNLQL- 83 (290)
T ss_dssp -CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTC--EEEEEC----------CHHHHHHSSCCSEEEEESCC----CHHH-
T ss_pred cCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecccCCHHHHHH-
Confidence 34589999865554 3455667777888885 55555 555566666667777777788766654433 22 2221
Q ss_pred hhhccCCcEEEec
Q 029271 125 AAANSQILVIRVP 137 (196)
Q Consensus 125 vA~~t~~PVIgvP 137 (196)
+ .....||+.+-
T Consensus 84 l-~~~~iPvV~~~ 95 (290)
T 3clk_A 84 L-QSSDVPYCFLS 95 (290)
T ss_dssp H-HCC--CEEEES
T ss_pred H-HhCCCCEEEEc
Confidence 2 23567888763
No 81
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=91.84 E-value=3.8 Score=32.17 Aligned_cols=84 Identities=13% Similarity=0.128 Sum_probs=57.1
Q ss_pred eEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCC-CeEEEEecCCCCchhHhhhh--
Q 029271 54 IVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG-IKIIIVGDGVEAHLSGVAAA-- 127 (196)
Q Consensus 54 ~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~-~~V~IavAG~sa~L~gvvA~-- 127 (196)
+|+++..+.++ ....+.+.+.++++|+.+.+.....+..+++..+.++.+..++ ++-+|............+.-
T Consensus 2 ~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~ 81 (276)
T 3ksm_A 2 KLLLVLKGDSNAYWRQVYLGAQKAADEAGVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYR 81 (276)
T ss_dssp EEEEECSCSSSTHHHHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHH
T ss_pred eEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHH
Confidence 68888876665 3456677888889987544333225678888888888888888 88777765444444444433
Q ss_pred ccCCcEEEec
Q 029271 128 NSQILVIRVP 137 (196)
Q Consensus 128 ~t~~PVIgvP 137 (196)
....||+.+-
T Consensus 82 ~~~ipvV~~~ 91 (276)
T 3ksm_A 82 ARNIPVLVVD 91 (276)
T ss_dssp HTTCCEEEES
T ss_pred HCCCcEEEEe
Confidence 3578998874
No 82
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=91.76 E-value=4.5 Score=32.81 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=55.8
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh--
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 127 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~-- 127 (196)
.+|++++.+.++. ...+.+.+.++++|+ ++.+......+++..++++.+..++++-||........+...+.-
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 80 (306)
T 2vk2_A 3 LTVGFSQVGSESGWRAAETNVAKSEAEKRGI--TLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAK 80 (306)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHH
Confidence 4799999876652 344567778889996 455566667778777888888777887666655444443344432
Q ss_pred ccCCcEEEec
Q 029271 128 NSQILVIRVP 137 (196)
Q Consensus 128 ~t~~PVIgvP 137 (196)
....||+.+-
T Consensus 81 ~~~iPvV~~~ 90 (306)
T 2vk2_A 81 DAEIPVFLLD 90 (306)
T ss_dssp HTTCCEEEES
T ss_pred HCCCCEEEec
Confidence 3568998764
No 83
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=91.49 E-value=4.5 Score=33.55 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=56.3
Q ss_pred CCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--
Q 029271 52 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-- 126 (196)
+..|++++.+.++ ....+.+.+.++++|. ++-+...+..++...++++.+..++++-+|........ ..+.
T Consensus 68 ~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~~--~~~~~l 143 (344)
T 3kjx_A 68 VNLVAVIIPSLSNMVFPEVLTGINQVLEDTEL--QPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSE--AARAML 143 (344)
T ss_dssp CSEEEEEESCSSSSSHHHHHHHHHHHHTSSSS--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCH--HHHHHH
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCCH--HHHHHH
Confidence 4579999987766 4556677777788876 55677788889988899998888888755554332221 2222
Q ss_pred hccCCcEEEe
Q 029271 127 ANSQILVIRV 136 (196)
Q Consensus 127 ~~t~~PVIgv 136 (196)
....+||+-+
T Consensus 144 ~~~~iPvV~i 153 (344)
T 3kjx_A 144 DAAGIPVVEI 153 (344)
T ss_dssp HHCSSCEEEE
T ss_pred HhCCCCEEEE
Confidence 2457898876
No 84
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=91.46 E-value=1.5 Score=36.00 Aligned_cols=85 Identities=12% Similarity=0.026 Sum_probs=61.1
Q ss_pred CCCCeEEEEEcCCCCH---HHHHHHHHHHHHhCC----CeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh
Q 029271 50 ADAPIVGIIMESDLDL---PVMNDAARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 122 (196)
Q Consensus 50 ~~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi----~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~ 122 (196)
+++..|+|+. +.++- +..+.+.+.|++.|. +..+-++..+..+++..++++.+.+++++.||+... .+ ..
T Consensus 6 ~~t~~IGvi~-~~~~p~~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~~-~~-~~ 82 (302)
T 2qh8_A 6 AKTAKVAVSQ-IVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIAT-PT-AQ 82 (302)
T ss_dssp -CCEEEEEEE-SSCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEESH-HH-HH
T ss_pred cCCcEEEEEE-eccChhHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCh-HH-HH
Confidence 3456899884 44442 455677888888988 778888999999999999999999888988887642 21 12
Q ss_pred HhhhhccCCcEEEec
Q 029271 123 GVAAANSQILVIRVP 137 (196)
Q Consensus 123 gvvA~~t~~PVIgvP 137 (196)
.+.......||+-|-
T Consensus 83 ~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 83 ALVSATKTIPIVFTA 97 (302)
T ss_dssp HHHHHCSSSCEEEEE
T ss_pred HHHhcCCCcCEEEEe
Confidence 223335788999774
No 85
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=91.23 E-value=2.4 Score=35.55 Aligned_cols=108 Identities=6% Similarity=0.089 Sum_probs=49.1
Q ss_pred hccccCCCCCccccccccc-ccc--------ccCCCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCC-
Q 029271 26 CQIVYVPAACPSTKSCLPR-FLL--------LAADAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQN- 92 (196)
Q Consensus 26 ~l~~vt~~~~~~vk~v~~~-~~~--------~~~~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~- 92 (196)
+...|.++--+.|.+++++ .+. ....+..|+++..+.++- ...+.+.+.++++|+. +-+...+..
T Consensus 26 ~~~~vs~~tr~rV~~~a~~lgY~pn~~ar~l~~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~~~ 103 (349)
T 1jye_A 26 QASHVSAKTREKVEAAMAELNYIPNRVAQQLAGKQSLLIGVATSSLALHAPSQIVAAILSRADQLGAS--VVVSMVERSG 103 (349)
T ss_dssp ------------------------------------CEEEEEESCTTSHHHHHHHHHHHHHHHHTTCE--EEEEECCSSS
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCcCHHHHHhhcCCCCEEEEEeCCCCcccHHHHHHHHHHHHHHcCCE--EEEEeCCCCc
Confidence 3334545444555554444 221 122345799999776552 4556777788888864 445555543
Q ss_pred chHHHHHHHHHhhCCCeEEEEecCCCCchhHh--hhhccCCcEEEe
Q 029271 93 CKEALSYALSAKERGIKIIIVGDGVEAHLSGV--AAANSQILVIRV 136 (196)
Q Consensus 93 p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv--vA~~t~~PVIgv 136 (196)
++...++++.+..++++-+|........ ... ......+||+-+
T Consensus 104 ~~~~~~~l~~l~~~~vdGiIi~~~~~~~-~~~~~~~~~~~iPvV~i 148 (349)
T 1jye_A 104 VEACKTAVHNLLAQRVSGLIINYPLDDQ-DAIAVEAACTNVPALFL 148 (349)
T ss_dssp HHHHHHHHHHHHTTTCSCEEEESCCCHH-HHHHHHHHTTTSCEEES
T ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCh-hHHHHHHhhCCCCEEEE
Confidence 5666677777777778755554332211 111 122356888865
No 86
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=91.08 E-value=5.6 Score=32.68 Aligned_cols=84 Identities=7% Similarity=0.098 Sum_probs=56.3
Q ss_pred CCeEEEEEcC-CCC---HHHHHHHHHHHHHhCCCeEEEEEccc--CCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh
Q 029271 52 APIVGIIMES-DLD---LPVMNDAARTLSDFGVPYEIKILPPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 52 ~~~V~IimGS-~SD---~~~~~~~~~~l~~~gi~~ev~V~SaH--R~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv 125 (196)
+..|++++.+ .++ ....+.+.+.+++.|..+.+.++..+ ..++.-.++++.+..++++-||. .+........+
T Consensus 43 ~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi-~~~~~~~~~~~ 121 (342)
T 1jx6_A 43 PIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIF-TLDTTRHRKFV 121 (342)
T ss_dssp CEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTCSEEEE-CCSSSTTHHHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEE-eCChHhHHHHH
Confidence 3479999876 333 25667788888999988777765555 56777777888887788876666 55544433433
Q ss_pred hh--ccCCcEEEe
Q 029271 126 AA--NSQILVIRV 136 (196)
Q Consensus 126 A~--~t~~PVIgv 136 (196)
.- ....||+.+
T Consensus 122 ~~~~~~~ip~V~~ 134 (342)
T 1jx6_A 122 EHVLDSTNTKLIL 134 (342)
T ss_dssp HHHHHHCSCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 22 245787755
No 87
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=91.08 E-value=2.3 Score=35.16 Aligned_cols=83 Identities=12% Similarity=0.071 Sum_probs=58.0
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEE-cccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh-
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 127 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~-SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~- 127 (196)
.+|++++-..++- ...+.+.+.++++|+ ++.+. .....++.-.+.++++..++++.||.....+..+..++.-
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a 81 (316)
T 1tjy_A 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGI--DVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRA 81 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTC--EEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHH
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHhCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHH
Confidence 5799998766552 233455666778885 55565 3677778878888888888998888776666666666532
Q ss_pred -ccCCcEEEec
Q 029271 128 -NSQILVIRVP 137 (196)
Q Consensus 128 -~t~~PVIgvP 137 (196)
....|||.+-
T Consensus 82 ~~~gipvV~~d 92 (316)
T 1tjy_A 82 MQRGVKILTWD 92 (316)
T ss_dssp HHTTCEEEEES
T ss_pred HHCcCEEEEec
Confidence 3578999873
No 88
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=91.04 E-value=4.9 Score=32.19 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=54.0
Q ss_pred CCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEE-EcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh-
Q 029271 52 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V-~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA- 126 (196)
+.+|+++....++ ....+.+.+.++++|+ ++.+ ......+++..++++.+..++++.+|.....+..+...+.
T Consensus 4 ~~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~~~~~~~~~~~ 81 (303)
T 3d02_A 4 EKTVVNISKVDGMPWFNRMGEGVVQAGKEFNL--NASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKK 81 (303)
T ss_dssp CEEEEEECSCSSCHHHHHHHHHHHHHHHHTTE--EEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHH
T ss_pred ceEEEEEeccCCChHHHHHHHHHHHHHHHcCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHH
Confidence 3578898866555 2345566777788884 5554 3366778888888888888888877766544333333332
Q ss_pred -hccCCcEEEe
Q 029271 127 -ANSQILVIRV 136 (196)
Q Consensus 127 -~~t~~PVIgv 136 (196)
.....|||.+
T Consensus 82 ~~~~~ipvV~~ 92 (303)
T 3d02_A 82 ARDAGIVVLTN 92 (303)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCeEEEE
Confidence 2356899876
No 89
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=91.03 E-value=6.2 Score=33.03 Aligned_cols=82 Identities=10% Similarity=0.091 Sum_probs=50.7
Q ss_pred CCeEEEEEc--CCCCH----HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEec-CCCCchhHh
Q 029271 52 APIVGIIME--SDLDL----PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD-GVEAHLSGV 124 (196)
Q Consensus 52 ~~~V~IimG--S~SD~----~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA-G~sa~L~gv 124 (196)
+.+|++|.- +.+|. .+.+.+.+.++++|+ ++.++.... .....+.++.+..++++.||... +....+--+
T Consensus 4 ~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~--~~~~~~~~~-~~~~~~~l~~l~~~~~dgIi~~~~~~~~~~~~~ 80 (318)
T 2fqx_A 4 DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNA--KCKYVTAST-DAEYVPSLSAFADENMGLVVACGSFLVEAVIET 80 (318)
T ss_dssp CCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTC--EEEEEECCS-GGGHHHHHHHHHHTTCSEEEEESTTTHHHHHHH
T ss_pred CcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCC--eEEEEeCCC-HHHHHHHHHHHHHcCCCEEEECChhHHHHHHHH
Confidence 357888874 77773 345566677788996 455544443 34446778888888898777664 333334333
Q ss_pred hhhccCCcEEEe
Q 029271 125 AAANSQILVIRV 136 (196)
Q Consensus 125 vA~~t~~PVIgv 136 (196)
.......|++-|
T Consensus 81 a~~~p~~p~v~i 92 (318)
T 2fqx_A 81 SARFPKQKFLVI 92 (318)
T ss_dssp HHHCTTSCEEEE
T ss_pred HHHCCCCEEEEE
Confidence 322346788876
No 90
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=90.90 E-value=5.9 Score=32.56 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=53.6
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHh-CCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDF-GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~-gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
+.+|++++.. ++- ...+.+.+.+++. |+ ++.+...+..++...++++.+..++++-+|........+...+.-
T Consensus 6 ~~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~--~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~ 82 (325)
T 2x7x_A 6 HFRIGVAQCS-DDSWRHKMNDEILREAMFYNGV--SVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAPMTPIVEE 82 (325)
T ss_dssp CCEEEEEESC-CSHHHHHHHHHHHHHHTTSSSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSHHHHHHHHHH
T ss_pred CeEEEEEecC-CCHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHH
Confidence 4589999977 542 2344555666666 65 566667777788888888888888898777654433333333322
Q ss_pred --ccCCcEEEec
Q 029271 128 --NSQILVIRVP 137 (196)
Q Consensus 128 --~t~~PVIgvP 137 (196)
....|||.+-
T Consensus 83 ~~~~~iPvV~~~ 94 (325)
T 2x7x_A 83 AYQKGIPVILVD 94 (325)
T ss_dssp HHHTTCCEEEES
T ss_pred HHHCCCeEEEeC
Confidence 3568998763
No 91
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=90.77 E-value=2.1 Score=32.35 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhCCC-eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh--------hhccCCcEEEe
Q 029271 66 PVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--------AANSQILVIRV 136 (196)
Q Consensus 66 ~~~~~~~~~l~~~gi~-~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv--------A~~t~~PVIgv 136 (196)
...+++.+.++..|++ ++..+.. - +-...+++.+++.+++.||.++-..+.+...+ .-+++.||+-|
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~--G--~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~~PVlvV 156 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIV--G--APVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIV 156 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEEC--S--SHHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEec--C--CHHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCCCCEEEE
Confidence 3455666777778998 8877763 2 23455666667778887777765555555433 34578999999
Q ss_pred cCCC
Q 029271 137 PLLS 140 (196)
Q Consensus 137 P~~~ 140 (196)
|...
T Consensus 157 ~~~~ 160 (163)
T 1tq8_A 157 HTTE 160 (163)
T ss_dssp CCC-
T ss_pred eCCC
Confidence 8754
No 92
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=90.46 E-value=5.6 Score=31.60 Aligned_cols=82 Identities=15% Similarity=0.279 Sum_probs=54.5
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--h
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--A 127 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA--~ 127 (196)
..|++++.+.++. ...+.+.+.+++.|. ++-+......+++-.++++.+..++++-+|........+...+. .
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 79 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLGY--NLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMAN 79 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHH
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcCc--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHH
Confidence 4688888776653 455667778888885 56666666777777778888877888766655444444333332 2
Q ss_pred ccCCcEEEe
Q 029271 128 NSQILVIRV 136 (196)
Q Consensus 128 ~t~~PVIgv 136 (196)
....||+-+
T Consensus 80 ~~~iPvV~i 88 (271)
T 2dri_A 80 QANIPVITL 88 (271)
T ss_dssp HTTCCEEEE
T ss_pred HCCCcEEEe
Confidence 356898876
No 93
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=90.44 E-value=6 Score=31.86 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=54.0
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-- 126 (196)
+..|++++-..++- ...+.+.+.+++.|. ++.+......++...++++.+..++++-+|....... ...+.
T Consensus 16 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~--~~~~~~l 91 (289)
T 2fep_A 16 TTTVGVIIPDISSIFYSELARGIEDIATMYKY--NIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNIT--DEHVAEF 91 (289)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCCC--HHHHHHH
T ss_pred CCeEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCCC--HHHHHHH
Confidence 45899999766652 455667777888886 4555666677777778888888888876665543221 22222
Q ss_pred hccCCcEEEec
Q 029271 127 ANSQILVIRVP 137 (196)
Q Consensus 127 ~~t~~PVIgvP 137 (196)
....+||+.+-
T Consensus 92 ~~~~iPvV~~~ 102 (289)
T 2fep_A 92 KRSPVPIVLAA 102 (289)
T ss_dssp HHSSSCEEEES
T ss_pred HhcCCCEEEEc
Confidence 23568988763
No 94
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=90.39 E-value=5.6 Score=31.51 Aligned_cols=82 Identities=9% Similarity=0.076 Sum_probs=53.7
Q ss_pred CCeEEEEEcC--CCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh
Q 029271 52 APIVGIIMES--DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 126 (196)
Q Consensus 52 ~~~V~IimGS--~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA 126 (196)
+.+|++++.. .++ ....+.+.+.+++.|+ ++.+......++...++++.+..++++-+|........ ..+.
T Consensus 19 ~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~--~~~~ 94 (296)
T 3brq_A 19 TQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV--DEID 94 (296)
T ss_dssp CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTC--EEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSSSCH--HHHH
T ss_pred CceEEEEeCCcccCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCh--HHHH
Confidence 4589999865 443 3456677778888886 55566777778877888888877888766665443221 2221
Q ss_pred --hc-cCCcEEEec
Q 029271 127 --AN-SQILVIRVP 137 (196)
Q Consensus 127 --~~-t~~PVIgvP 137 (196)
.. ...|||.+-
T Consensus 95 ~l~~~~~iPvV~~~ 108 (296)
T 3brq_A 95 DIIDAHSQPIMVLN 108 (296)
T ss_dssp HHHHTCSSCEEEES
T ss_pred HHHhcCCCCEEEEc
Confidence 22 578988763
No 95
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=90.37 E-value=4.6 Score=32.26 Aligned_cols=79 Identities=9% Similarity=0.131 Sum_probs=51.2
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC--chhHhhh
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA--HLSGVAA 126 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa--~L~gvvA 126 (196)
+.+|++++.. ++- ...+.+.+.+++.|+ ++.+......++...++++.+..++++-+|....... .+.-+
T Consensus 8 ~~~Igvi~~~-~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l-- 82 (288)
T 2qu7_A 8 SNIIAFIVPD-QNPFFTEVLTEISHECQKHHL--HVAVASSEENEDKQQDLIETFVSQNVSAIILVPVKSKFQMKREW-- 82 (288)
T ss_dssp EEEEEEEESS-CCHHHHHHHHHHHHHHGGGTC--EEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCSSSCCCCCGGG--
T ss_pred CCEEEEEECC-CCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCccEEEEecCCCChHHHHHh--
Confidence 3479999977 542 344566667778886 4555666667777778888887888876666544322 22222
Q ss_pred hccCCcEEEec
Q 029271 127 ANSQILVIRVP 137 (196)
Q Consensus 127 ~~t~~PVIgvP 137 (196)
...||+.+-
T Consensus 83 --~~iPvV~~~ 91 (288)
T 2qu7_A 83 --LKIPIMTLD 91 (288)
T ss_dssp --GGSCEEEES
T ss_pred --cCCCEEEEe
Confidence 567888763
No 96
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=89.60 E-value=6.6 Score=31.13 Aligned_cols=83 Identities=14% Similarity=0.110 Sum_probs=58.6
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC---chhHhhh
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA---HLSGVAA 126 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa---~L~gvvA 126 (196)
..|+++..+.+|. ...+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-+|.....+. .....+.
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 93 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGY--SMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYL 93 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHH
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHH
Confidence 5899999877763 566778888888886 5666777888888888999888888986666544331 2223332
Q ss_pred --hccCCcEEEec
Q 029271 127 --ANSQILVIRVP 137 (196)
Q Consensus 127 --~~t~~PVIgvP 137 (196)
....+|||.+=
T Consensus 94 ~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 94 NLEKNGIPFAMIN 106 (298)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHhcCCCEEEEe
Confidence 23578988763
No 97
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=89.50 E-value=6.2 Score=32.40 Aligned_cols=76 Identities=13% Similarity=0.167 Sum_probs=43.2
Q ss_pred CeEEEEecCCCCchhHhhhhccCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecCChhh--HHHHHHHHHccCCH
Q 029271 108 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKN--AALYAVKVLGIADE 184 (196)
Q Consensus 108 ~~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~~~~n--AA~~AaqILa~~d~ 184 (196)
++++|.-+| ++.-+=|...-.|||..|..+....-.. .--.++ .|. +.+ -.+.+ +.-+|..|..+ |+
T Consensus 255 ad~~v~~sg---~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~--~g~--g~~--~~~~d~~~~~la~~i~~l-~~ 324 (364)
T 1f0k_A 255 ADVVVCRSG---ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK--AGA--AKI--IEQPQLSVDAVANTLAGW-SR 324 (364)
T ss_dssp CSEEEECCC---HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH--TTS--EEE--CCGGGCCHHHHHHHHHTC-CH
T ss_pred CCEEEECCc---hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHh--CCc--EEE--eccccCCHHHHHHHHHhc-CH
Confidence 467777665 3333335567899999877542110011 111222 343 222 24444 77788888888 99
Q ss_pred HHHHHHHHH
Q 029271 185 DLLERIRKY 193 (196)
Q Consensus 185 ~l~~kl~~~ 193 (196)
+.++++...
T Consensus 325 ~~~~~~~~~ 333 (364)
T 1f0k_A 325 ETLLTMAER 333 (364)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998887543
No 98
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=89.26 E-value=7.3 Score=31.18 Aligned_cols=82 Identities=17% Similarity=0.148 Sum_probs=58.0
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh--hh
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--AA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv--A~ 127 (196)
.+|+++..+.++- ...+.+.+.++++|+ ++-+.+. ..+++-.+.++++..++++-||............+ +.
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~ 79 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGF--EVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKAR 79 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTE--EEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHH
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHH
Confidence 4789998877663 455667778888885 5556666 48888888889888888987777665555555544 23
Q ss_pred ccCCcEEEec
Q 029271 128 NSQILVIRVP 137 (196)
Q Consensus 128 ~t~~PVIgvP 137 (196)
....||+.+=
T Consensus 80 ~~~iPvV~~~ 89 (306)
T 8abp_A 80 GYDMKVIAVD 89 (306)
T ss_dssp HTTCEEEEES
T ss_pred HCCCcEEEeC
Confidence 4578998764
No 99
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=89.22 E-value=6.6 Score=31.91 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=53.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh--------hhccCCcEEE
Q 029271 64 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--------AANSQILVIR 135 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv--------A~~t~~PVIg 135 (196)
.....+++.+.|++.|++++..+..- +-...+.+.++..+++.+|.++-..+.+...+ ..+++.||+-
T Consensus 212 ~~~~l~~~~~~l~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvLv 287 (294)
T 3loq_A 212 KTADLRVMEEVIGAEGIEVHVHIESG----TPHKAILAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVFV 287 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECS----CHHHHHHHHHHHTTCSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhcCcCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEEE
Confidence 67788899999999999988777532 34455666666778888888877666665543 3467899999
Q ss_pred ecCCC
Q 029271 136 VPLLS 140 (196)
Q Consensus 136 vP~~~ 140 (196)
||...
T Consensus 288 v~~~~ 292 (294)
T 3loq_A 288 CKRGD 292 (294)
T ss_dssp ECSCT
T ss_pred ECCCC
Confidence 99764
No 100
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=88.95 E-value=0.96 Score=30.09 Aligned_cols=46 Identities=11% Similarity=0.049 Sum_probs=32.1
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHH
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 101 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~ 101 (196)
+|.+.+.+ .=+.|++++..|+++|++|+..-......+....++.+
T Consensus 5 ~v~ly~~~--~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~ 50 (89)
T 3msz_A 5 KVKIYTRN--GCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMN 50 (89)
T ss_dssp CEEEEECT--TCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHH
T ss_pred EEEEEEcC--CChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHH
Confidence 45555433 45999999999999999998876666555545445443
No 101
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=88.95 E-value=1.8 Score=30.94 Aligned_cols=64 Identities=16% Similarity=0.178 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh-------hhccCCcEEEec
Q 029271 68 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA-------AANSQILVIRVP 137 (196)
Q Consensus 68 ~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv-------A~~t~~PVIgvP 137 (196)
.+++.+.+++.|++++..+..- . -...+++.++ +++.+|.++-..+.+...+ .-+++.||+-||
T Consensus 68 l~~~~~~~~~~g~~~~~~v~~g--~--~~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVlvv~ 138 (138)
T 3idf_A 68 TQKFSTFFTEKGINPFVVIKEG--E--PVEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAPIPVLIVK 138 (138)
T ss_dssp HHHHHHHHHTTTCCCEEEEEES--C--HHHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHCCCCeEEEEecC--C--hHHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCCCCEEEeC
Confidence 3445555666799988777643 2 2344555444 7887777765555554443 234578888776
No 102
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=88.83 E-value=1.9 Score=37.05 Aligned_cols=83 Identities=17% Similarity=0.115 Sum_probs=59.5
Q ss_pred eEEEEEcCCCC----HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc-
Q 029271 54 IVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN- 128 (196)
Q Consensus 54 ~V~IimGS~SD----~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~- 128 (196)
++.||.-..|- ....+++...|++.|+.+++..+. .+....++++++..++++++|+ +|+.+.+--++.+.
T Consensus 26 ~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~---~~~~a~~~~~~~~~~~~d~vvv-~GGDGTv~~v~~~l~ 101 (337)
T 2qv7_A 26 RARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE---KIGDATLEAERAMHENYDVLIA-AGGDGTLNEVVNGIA 101 (337)
T ss_dssp EEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC---STTHHHHHHHHHTTTTCSEEEE-EECHHHHHHHHHHHT
T ss_pred eEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEec---CcchHHHHHHHHhhcCCCEEEE-EcCchHHHHHHHHHH
Confidence 57777744442 367789999999999887776542 3345667777776667776665 57788888777776
Q ss_pred ---cCCcEEEecCCC
Q 029271 129 ---SQILVIRVPLLS 140 (196)
Q Consensus 129 ---t~~PVIgvP~~~ 140 (196)
+..|+..+|.-+
T Consensus 102 ~~~~~~pl~iIP~GT 116 (337)
T 2qv7_A 102 EKPNRPKLGVIPMGT 116 (337)
T ss_dssp TCSSCCEEEEEECSS
T ss_pred hCCCCCcEEEecCCc
Confidence 678999999754
No 103
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=88.73 E-value=4.6 Score=32.34 Aligned_cols=84 Identities=10% Similarity=0.017 Sum_probs=57.2
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh--
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 127 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~-- 127 (196)
.+|++++.+.++- ...+.+.+.++++|. +++.+...+..++...++++.+..++++.||............+.-
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~ 81 (309)
T 2fvy_A 3 TRIGVTIYKYDDNFMSVVRKAIEQDAKAAPD-VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKAR 81 (309)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHTCTT-EEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHH
T ss_pred cEEEEEeccCCcHHHHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHH
Confidence 4789998776652 345566777778885 3666777777888888888888888898777655444444444332
Q ss_pred ccCCcEEEec
Q 029271 128 NSQILVIRVP 137 (196)
Q Consensus 128 ~t~~PVIgvP 137 (196)
....|||.+-
T Consensus 82 ~~~iPvV~~~ 91 (309)
T 2fvy_A 82 GQNVPVVFFN 91 (309)
T ss_dssp TTTCCEEEES
T ss_pred HCCCcEEEec
Confidence 3568998764
No 104
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=88.55 E-value=3.3 Score=30.78 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhCCCeEE--EEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh-----Hh---hhhccCCcEEEec
Q 029271 68 MNDAARTLSDFGVPYEI--KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----GV---AAANSQILVIRVP 137 (196)
Q Consensus 68 ~~~~~~~l~~~gi~~ev--~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~-----gv---vA~~t~~PVIgvP 137 (196)
.+++.+.++..|++++. .+..- +-...+++.+++.+++.||.++-..+.+. ++ +.-++..||+-||
T Consensus 80 l~~~~~~~~~~g~~~~~~~~~~~g----~~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~~PVlvv~ 155 (170)
T 2dum_A 80 LQEKAEEVKRAFRAKNVRTIIRFG----IPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIK 155 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEEE----CHHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHcCCceeeeeEEecC----ChHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCCCCEEEEc
Confidence 34455555667999887 66532 33445666666677887776665444433 22 3356889999999
Q ss_pred CCC
Q 029271 138 LLS 140 (196)
Q Consensus 138 ~~~ 140 (196)
...
T Consensus 156 ~~~ 158 (170)
T 2dum_A 156 EVD 158 (170)
T ss_dssp CCC
T ss_pred cCC
Confidence 754
No 105
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=88.40 E-value=7.9 Score=31.79 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=51.3
Q ss_pred CCCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh-
Q 029271 51 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 126 (196)
Q Consensus 51 ~~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA- 126 (196)
.+..|+++....++ ....+.+.+.+++.|.. +-+...+..++...++++.+..++++-+|........ ..+.
T Consensus 59 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--~~~~~ 134 (332)
T 2hsg_A 59 KTTTVGVIIPDISNIFYAELARGIEDIATMYKYN--IILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTE--EHVEE 134 (332)
T ss_dssp -CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTCE--EEEEECCSHHHHHHHHHHHTSCCSSCCEEECCSSCCH--HHHHH
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCE--EEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCH--HHHHH
Confidence 34589999876555 35566777888888864 5555556666777778888877788755554433221 2222
Q ss_pred -hccCCcEEEec
Q 029271 127 -ANSQILVIRVP 137 (196)
Q Consensus 127 -~~t~~PVIgvP 137 (196)
.....||+.+-
T Consensus 135 l~~~~iPvV~~~ 146 (332)
T 2hsg_A 135 LKKSPVPVVLAA 146 (332)
T ss_dssp HTTSSSCEEEES
T ss_pred HHhCCCCEEEEc
Confidence 23568888763
No 106
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=88.33 E-value=9.1 Score=31.07 Aligned_cols=85 Identities=20% Similarity=0.230 Sum_probs=59.7
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh-
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 127 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~- 127 (196)
+.+|++++-+.++- ...+.+.+.++++|+ ++-+...+..+++-.++++.+..++++.||...-........+.-
T Consensus 3 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~ 80 (330)
T 3uug_A 3 KGSVGIAMPTKSSARWIDDGNNIVKQLQEAGY--KTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQA 80 (330)
T ss_dssp CCEEEEEECCSSSTHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHH
T ss_pred CcEEEEEeCCCcchHHHHHHHHHHHHHHHcCC--EEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHH
Confidence 46899999876653 345567777888886 555666888888888888888888898777665544454444432
Q ss_pred -ccCCcEEEecC
Q 029271 128 -NSQILVIRVPL 138 (196)
Q Consensus 128 -~t~~PVIgvP~ 138 (196)
....|||.+=.
T Consensus 81 ~~~giPvV~~~~ 92 (330)
T 3uug_A 81 GEQGIKVIAYDR 92 (330)
T ss_dssp HHTTCEEEEESS
T ss_pred HHCCCCEEEECC
Confidence 35689987643
No 107
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=87.99 E-value=2.3 Score=35.45 Aligned_cols=86 Identities=12% Similarity=0.053 Sum_probs=61.5
Q ss_pred CCCeEEEEE-cCCCCHHHH-HHHHHHHHHhCC----CeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh
Q 029271 51 DAPIVGIIM-ESDLDLPVM-NDAARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 124 (196)
Q Consensus 51 ~~~~V~Iim-GS~SD~~~~-~~~~~~l~~~gi----~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv 124 (196)
+..+|+|+- -..--++-+ +...+.|++.|. ++++.+..|...+....++++++.+++.++||+++-- +.-.+
T Consensus 7 ~~~~igi~q~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~~~~DlIiai~t~--aa~a~ 84 (302)
T 3lkv_A 7 KTAKVAVSQIVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATP--TAQAL 84 (302)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEESHH--HHHHH
T ss_pred CCceEEEEEeecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHhcCCcEEEEcCCH--HHHHH
Confidence 345888873 122123333 346677888775 5888999999999999999999999999999987533 23345
Q ss_pred hhhccCCcEEEecC
Q 029271 125 AAANSQILVIRVPL 138 (196)
Q Consensus 125 vA~~t~~PVIgvP~ 138 (196)
.......||+-|-+
T Consensus 85 ~~~~~~iPVVf~~v 98 (302)
T 3lkv_A 85 VSATKTIPIVFTAV 98 (302)
T ss_dssp HHHCSSSCEEEEEE
T ss_pred HhhcCCCCeEEEec
Confidence 55667899997754
No 108
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=87.48 E-value=3.3 Score=30.98 Aligned_cols=67 Identities=16% Similarity=0.070 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh-----Hh---hhhccCCcEEEe
Q 029271 68 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----GV---AAANSQILVIRV 136 (196)
Q Consensus 68 ~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~-----gv---vA~~t~~PVIgv 136 (196)
.+++.+.+++.|+++++++.-.+..| ...+++.++..+++.+|.++-..+.+. ++ +.-++..||+-|
T Consensus 80 l~~~~~~~~~~g~~~~~~~~v~~G~~--~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~~PVLvV 154 (155)
T 3dlo_A 80 LSWAVSIIRKEGAEGEEHLLVRGKEP--PDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEESSSCH--HHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHhcCCCceEEEEecCCCH--HHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCCCCEEEe
Confidence 44556666778999887654444444 355666667778887777765444333 22 334678888755
No 109
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=87.05 E-value=1.9 Score=31.46 Aligned_cols=74 Identities=7% Similarity=-0.058 Sum_probs=48.3
Q ss_pred CeEEEEEcCC---CCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhcc
Q 029271 53 PIVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 129 (196)
Q Consensus 53 ~~V~IimGS~---SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t 129 (196)
+.|.|.|-++ +.=|+|.++++.|++.|++|+..=... .++...++ +++ +|..
T Consensus 16 ~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~--d~~~~~~l-~~~----------------------~g~~ 70 (111)
T 3zyw_A 16 APCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS--DEEVRQGL-KAY----------------------SSWP 70 (111)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG--CHHHHHHH-HHH----------------------HTCC
T ss_pred CCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC--CHHHHHHH-HHH----------------------HCCC
Confidence 4688888644 567999999999999999988653333 23332222 221 2456
Q ss_pred CCcEEEecCCCCCCChhh-hhhhhc
Q 029271 130 QILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 130 ~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
+.|+|-+ .+...+|.| +..+.+
T Consensus 71 tvP~ifi--~g~~iGG~d~l~~l~~ 93 (111)
T 3zyw_A 71 TYPQLYV--SGELIGGLDIIKELEA 93 (111)
T ss_dssp SSCEEEE--TTEEEECHHHHHHHHH
T ss_pred CCCEEEE--CCEEEecHHHHHHHHH
Confidence 7888753 344467888 777665
No 110
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=86.93 E-value=1.7 Score=31.37 Aligned_cols=66 Identities=12% Similarity=0.098 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCC-CeEEEEEcccCCchHHHHHHH-HHhhCCCeEEEEecCCCCchhHh--------hhhccCCcEEEec
Q 029271 68 MNDAARTLSDFGV-PYEIKILPPHQNCKEALSYAL-SAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVP 137 (196)
Q Consensus 68 ~~~~~~~l~~~gi-~~ev~V~SaHR~p~~~~~~~~-~~e~~~~~V~IavAG~sa~L~gv--------vA~~t~~PVIgvP 137 (196)
.+++.+.++..|+ +++..+..- +-...+++ .++..+++.+|.++-..+.+... +.-+++.||+-||
T Consensus 71 l~~~~~~~~~~g~~~~~~~~~~g----~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlvV~ 146 (146)
T 3s3t_A 71 MRQRQQFVATTSAPNLKTEISYG----IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAPCNVIVIR 146 (146)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEE----CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHHhcCCcceEEEEecC----ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCCCCEEEeC
Confidence 3444555556788 888776532 33455666 56667888777776544444332 2345688888776
No 111
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=86.83 E-value=3.4 Score=31.00 Aligned_cols=69 Identities=13% Similarity=0.099 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh--------hhhccCCcEEEecCC
Q 029271 68 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPLL 139 (196)
Q Consensus 68 ~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv--------vA~~t~~PVIgvP~~ 139 (196)
.+++.+.++..|++++..+.. - +-...+++.++..+++.+|.++-..+++..+ +.-++..||+-||..
T Consensus 89 l~~~~~~~~~~g~~~~~~v~~--G--~~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~~pVlvv~~~ 164 (175)
T 2gm3_A 89 LEFFVNKCHEIGVGCEAWIKT--G--DPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKRN 164 (175)
T ss_dssp HHHHHHHHHHHTCEEEEEEEE--S--CHHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEEEEECC
T ss_pred HHHHHHHHHHCCCceEEEEec--C--CHHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCCCCEEEEcCC
Confidence 334444566689988877653 2 2344566666666787666665444443332 334678999999875
Q ss_pred C
Q 029271 140 S 140 (196)
Q Consensus 140 ~ 140 (196)
.
T Consensus 165 ~ 165 (175)
T 2gm3_A 165 A 165 (175)
T ss_dssp G
T ss_pred c
Confidence 3
No 112
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=86.11 E-value=2.3 Score=30.65 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=47.2
Q ss_pred CeEEEEEcCC---CCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhcc
Q 029271 53 PIVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 129 (196)
Q Consensus 53 ~~V~IimGS~---SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t 129 (196)
++|.|.+-++ ..=|+|.++++.|+++|++|+..=.. ..++...++ ++ .++..
T Consensus 18 ~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~--~~~~~~~~l-~~----------------------~~g~~ 72 (109)
T 3ipz_A 18 EKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNIL--ENEMLRQGL-KE----------------------YSNWP 72 (109)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGG--GCHHHHHHH-HH----------------------HHTCS
T ss_pred CCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHH-HH----------------------HHCCC
Confidence 4688888764 36789999999999999998865332 223322222 21 12456
Q ss_pred CCcEEEecCCCCCCChhh-hhhhhc
Q 029271 130 QILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 130 ~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
+.|+|-+ .+...+|.| +..+.+
T Consensus 73 tvP~ifi--~g~~iGG~d~l~~l~~ 95 (109)
T 3ipz_A 73 TFPQLYI--GGEFFGGCDITLEAFK 95 (109)
T ss_dssp SSCEEEE--TTEEEECHHHHHHHHH
T ss_pred CCCeEEE--CCEEEeCHHHHHHHHH
Confidence 7787743 333457777 766654
No 113
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=85.78 E-value=4.7 Score=32.35 Aligned_cols=79 Identities=5% Similarity=-0.157 Sum_probs=51.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc---------CCchHHHHHHHHHhhC--CC-eEEEEecCCCCc
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------QNCKEALSYALSAKER--GI-KIIIVGDGVEAH 120 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH---------R~p~~~~~~~~~~e~~--~~-~V~IavAG~sa~ 120 (196)
.+|+|++ +.-...-+...+.|++.|+.+.. ..+.- ..++.+.++++++... |+ -||+.++++.-.
T Consensus 109 ~rvgvlt--~~~~~~~~~~~~~l~~~G~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~gadaIvLgCT~l~~~ 185 (223)
T 2dgd_A 109 RKLWIGT--PYIKERTLEEVEWWRNKGFEIVG-YDGLGKIRGIDISNTPIFTIYRLVKRHLNEVLKADAVYIACTALSTY 185 (223)
T ss_dssp CEEEEEE--SSCHHHHHHHHHHHHTTTCEEEE-EEECCCCSHHHHHTCCHHHHHHHHHTTHHHHTTSSEEEECCTTSCCT
T ss_pred CeEEEEe--CCchHHHHHHHHHHHhCCcEEec-ccCCCCCCcchhhccCHHHHHHHHHHHhcccCCCCEEEEeCCcccHH
Confidence 5899996 33445455666788888986432 22211 2456677888877766 78 478888888763
Q ss_pred -hhHhhhhccCCcEE
Q 029271 121 -LSGVAAANSQILVI 134 (196)
Q Consensus 121 -L~gvvA~~t~~PVI 134 (196)
+-.-+...+.+|||
T Consensus 186 ~~~~~l~~~~g~PVi 200 (223)
T 2dgd_A 186 EAVQYLHEDLDMPVV 200 (223)
T ss_dssp THHHHHHHHHTSCEE
T ss_pred HHHHHHHHHhCCCEE
Confidence 44545455668887
No 114
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=85.70 E-value=12 Score=29.82 Aligned_cols=82 Identities=12% Similarity=0.255 Sum_probs=53.6
Q ss_pred CeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh--
Q 029271 53 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 127 (196)
Q Consensus 53 ~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~-- 127 (196)
..|+++....++ ....+.+.+.+++.|+ ++-+......+++-.++++.+..++++-||........+...+..
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 79 (283)
T 2ioy_A 2 KTIGLVISTLNNPFFVTLKNGAEEKAKELGY--KIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEAN 79 (283)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHH
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHH
Confidence 368888877666 2455667778888886 455666666777777778887778887666554444443333322
Q ss_pred ccCCcEEEe
Q 029271 128 NSQILVIRV 136 (196)
Q Consensus 128 ~t~~PVIgv 136 (196)
....||+-+
T Consensus 80 ~~~iPvV~~ 88 (283)
T 2ioy_A 80 SKNIPVITI 88 (283)
T ss_dssp HTTCCEEEE
T ss_pred HCCCeEEEe
Confidence 356898876
No 115
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=85.24 E-value=12 Score=29.24 Aligned_cols=81 Identities=12% Similarity=0.039 Sum_probs=52.4
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 128 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~ 128 (196)
+..|++++.+.+|- ...+.+.+.+++.|. ++.+...+..++...++++.+..++++-+|.......... .+. .
T Consensus 2 s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~-~l~-~ 77 (255)
T 1byk_A 2 DKVVAIIVTRLDSLSENLAVQTMLPAFYEQGY--DPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEE-MLA-H 77 (255)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHTTTCCEEEEECCTTCCTT-TSG-G
T ss_pred CCEEEEEeCCCCCccHHHHHHHHHHHHHHcCC--EEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEecCccccHH-HHH-h
Confidence 35799999776663 455677778888886 5556666777787788888888788875555443222222 222 2
Q ss_pred cCCcEEEe
Q 029271 129 SQILVIRV 136 (196)
Q Consensus 129 t~~PVIgv 136 (196)
...||+.+
T Consensus 78 ~~~pvV~~ 85 (255)
T 1byk_A 78 WQSSLVLL 85 (255)
T ss_dssp GSSSEEEE
T ss_pred cCCCEEEE
Confidence 34687765
No 116
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=85.01 E-value=3.2 Score=30.43 Aligned_cols=67 Identities=16% Similarity=0.077 Sum_probs=39.9
Q ss_pred HHHHHHHHHHhCC-CeEEEEEcccCCchHHHHHHHH-HhhCCCeEEEEecCCCCch----hH---hhhhccCCcEEEec
Q 029271 68 MNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALS-AKERGIKIIIVGDGVEAHL----SG---VAAANSQILVIRVP 137 (196)
Q Consensus 68 ~~~~~~~l~~~gi-~~ev~V~SaHR~p~~~~~~~~~-~e~~~~~V~IavAG~sa~L----~g---vvA~~t~~PVIgvP 137 (196)
.+++.+.++..|+ +++..+.... +-...+++. +++.+++.+|.++-..+++ ++ -+.-+++.||+-||
T Consensus 81 l~~~~~~~~~~g~~~~~~~v~~~g---~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~~PVlvV~ 156 (156)
T 3fg9_A 81 VAEYVQLAEQRGVNQVEPLVYEGG---DVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVIVVR 156 (156)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEECS---CHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHHHcCCCceEEEEEeCC---CHHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCCCCEEEeC
Confidence 3445555667799 4887776422 233445555 5566788777766543333 22 23456788888775
No 117
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=83.50 E-value=4.6 Score=33.86 Aligned_cols=26 Identities=12% Similarity=0.003 Sum_probs=13.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFG 79 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~g 79 (196)
+.||++|||+.+ -+...+++.|.+-|
T Consensus 6 ~gKvalVTGas~--GIG~aiA~~la~~G 31 (254)
T 4fn4_A 6 KNKVVIVTGAGS--GIGRAIAKKFALND 31 (254)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHcC
Confidence 356777777766 23344444444444
No 118
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=83.29 E-value=2.9 Score=28.35 Aligned_cols=25 Identities=20% Similarity=0.188 Sum_probs=21.1
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEc
Q 029271 64 DLPVMNDAARTLSDFGVPYEIKILP 88 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~V~S 88 (196)
-=++|.+++..|++.|++|+..=..
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~ 37 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIM 37 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred cCccHHHHHHHHHHcCCCEEEEEee
Confidence 4589999999999999999865444
No 119
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=82.90 E-value=14 Score=28.92 Aligned_cols=78 Identities=8% Similarity=0.004 Sum_probs=39.5
Q ss_pred EEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--hcc
Q 029271 55 VGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--ANS 129 (196)
Q Consensus 55 V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA--~~t 129 (196)
|+++.-+.++- ...+.+.+.+++.|. ++-+......+++..++++.+..++++-+|........ ..+. -..
T Consensus 2 Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--~~~~~~~~~ 77 (276)
T 2h0a_A 2 VSVLLPFVATEFYRRLVEGIEGVLLEQRY--DLALFPILSLARLKRYLENTTLAYLTDGLILASYDLTE--RFEEGRLPT 77 (276)
T ss_dssp EEEEECCSCCHHHHHHHHHHHHHHGGGTC--EEEECCCCSCCCCC---------CCCSEEEEESCCCC--------CCSC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecCCCCH--HHHHHHhhc
Confidence 67777655553 345566677778885 55566666666666667777767788766655443221 2222 124
Q ss_pred CCcEEEe
Q 029271 130 QILVIRV 136 (196)
Q Consensus 130 ~~PVIgv 136 (196)
..||+.+
T Consensus 78 ~iPvV~~ 84 (276)
T 2h0a_A 78 ERPVVLV 84 (276)
T ss_dssp SSCEEEE
T ss_pred CCCEEEE
Confidence 5788875
No 120
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=82.65 E-value=13 Score=29.76 Aligned_cols=82 Identities=11% Similarity=0.147 Sum_probs=53.5
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEc--ccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~S--aHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
..|+++.-+.++- ...+.+.+.++++|+ ++-+++ .+..++.-.++++.+..++++-+|........+...+.-
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~ 79 (288)
T 1gud_A 2 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGV--SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVAR 79 (288)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--CEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHH
T ss_pred cEEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHH
Confidence 3688888766653 344566778888995 455555 667777777888888777887666655444443333322
Q ss_pred --ccCCcEEEe
Q 029271 128 --NSQILVIRV 136 (196)
Q Consensus 128 --~t~~PVIgv 136 (196)
....||+-+
T Consensus 80 ~~~~~iPvV~~ 90 (288)
T 1gud_A 80 AWKKGIYLVNL 90 (288)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCeEEEE
Confidence 246898876
No 121
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=82.29 E-value=5.3 Score=29.05 Aligned_cols=75 Identities=4% Similarity=0.050 Sum_probs=52.4
Q ss_pred eEEEEEc---CCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--hc
Q 029271 54 IVGIIME---SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--AN 128 (196)
Q Consensus 54 ~V~IimG---S~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA--~~ 128 (196)
+|.++|| |+| =.++++.+.+++.|+++++..+|.+...+. . ..+++||...-....+.-+-. ..
T Consensus 6 kIlvvC~~G~~TS--ll~~kl~~~~~~~gi~~~i~~~~~~~~~~~----~-----~~~D~Ii~t~~l~~~~~~~~~~~~~ 74 (109)
T 2l2q_A 6 NILLVCGAGMSTS--MLVQRIEKYAKSKNINATIEAIAETRLSEV----V-----DRFDVVLLAPQSRFNKKRLEEITKP 74 (109)
T ss_dssp EEEEESSSSCSSC--HHHHHHHHHHHHHTCSEEEEEECSTTHHHH----T-----TTCSEEEECSCCSSHHHHHHHHHHH
T ss_pred EEEEECCChHhHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhh----c-----CCCCEEEECCccHHHHHHHHHHhcc
Confidence 5888885 356 566799999999999999988888654432 1 347888887665554444432 23
Q ss_pred cCCcEEEecCC
Q 029271 129 SQILVIRVPLL 139 (196)
Q Consensus 129 t~~PVIgvP~~ 139 (196)
...||+-+++.
T Consensus 75 ~~~pv~~I~~~ 85 (109)
T 2l2q_A 75 KGIPIEIINTI 85 (109)
T ss_dssp HTCCEEECCHH
T ss_pred cCCCEEEEChH
Confidence 46899888774
No 122
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=81.99 E-value=4.3 Score=34.43 Aligned_cols=82 Identities=10% Similarity=0.103 Sum_probs=54.0
Q ss_pred CCeEEEEEcCCCCHH---HHHHHHHHHH----HhCCCeEEEEEcccCCchHH--------------HHHHHHHhhCCCe-
Q 029271 52 APIVGIIMESDLDLP---VMNDAARTLS----DFGVPYEIKILPPHQNCKEA--------------LSYALSAKERGIK- 109 (196)
Q Consensus 52 ~~~V~IimGS~SD~~---~~~~~~~~l~----~~gi~~ev~V~SaHR~p~~~--------------~~~~~~~e~~~~~- 109 (196)
...++|| |+-+=.. +.+++.+... ...+|| .+.|--..|+++ .+.++..++.|++
T Consensus 26 ~k~IGii-GGmg~~aT~~~~~~i~~~~~~~~D~~h~p~--~~~s~~~i~~r~~~~~~~g~~~~~~l~~~~~~L~~~Gad~ 102 (268)
T 3s81_A 26 KHTIGIL-GGMGPAATADMLEKFVELRHASCDQQHIPL--IVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDAGAEC 102 (268)
T ss_dssp CCCEEEE-CCSSHHHHHHHHHHHHHHSCCSSGGGSCCE--EEEECTTSCCHHHHHHHCCCCSHHHHHHHHHHHHHTTCSE
T ss_pred CCcEEEE-ecCCHHHHHHHHHHHHHhhHhhcCCCCCCE--EEeccCCHHHHHHHHHhCCchHHHHHHHHHHHHHHcCCCE
Confidence 4579999 7777665 5555555442 234554 566665667776 7888888899997
Q ss_pred EEEEecCCCCchhHhhhhccCCcEEEec
Q 029271 110 IIIVGDGVEAHLSGVAAANSQILVIRVP 137 (196)
Q Consensus 110 V~IavAG~sa~L~gvvA~~t~~PVIgvP 137 (196)
++|++-..+..+.- +...+..||||+.
T Consensus 103 IVIaCNTah~~l~~-lr~~~~iPvigii 129 (268)
T 3s81_A 103 IVIPCNTAHYWFDD-LQNVAKARMISIL 129 (268)
T ss_dssp EECSCSGGGGGHHH-HHHHCSSEEECHH
T ss_pred EEEeCCCHHHHHHH-HHHHCCCCEEccc
Confidence 45555545555544 5556789999963
No 123
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=81.26 E-value=11 Score=31.58 Aligned_cols=81 Identities=14% Similarity=0.062 Sum_probs=53.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc-c-------cCCchHHHHHHHHHhhCCCe-EEEE-ecCCCCc-h
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP-P-------HQNCKEALSYALSAKERGIK-IIIV-GDGVEAH-L 121 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S-a-------HR~p~~~~~~~~~~e~~~~~-V~Ia-vAG~sa~-L 121 (196)
.+|+|++ +.-...-+...+.|+..|+.+..-.+. . ...++.+.+.++++...|++ ||+. |+++... +
T Consensus 147 ~rvgvlt--p~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l~~~gadaIvLg~CT~l~~~~~ 224 (273)
T 2xed_A 147 QRVALVT--PYMRPLAEKVVAYLEAEGFTISDWRALEVADNTEVGCIPGEQVMAAARSLDLSEVDALVISCAVQMPSLPL 224 (273)
T ss_dssp CEEEEEE--CSCHHHHHHHHHHHHHTTCEEEEEEECCCCBHHHHHTCCHHHHHHHHHHSCCTTCSEEEEESSSSSCCTTH
T ss_pred CeEEEEc--CChhhhHHHHHHHHHHCCCEEeccccCCCccchhhcccCHHHHHHHHHHHhhCCCCEEEEcCCCCcchHHh
Confidence 5899996 344445556777888899875322111 1 22456788888888777885 7778 8888763 4
Q ss_pred hHhhhhccCCcEEE
Q 029271 122 SGVAAANSQILVIR 135 (196)
Q Consensus 122 ~gvvA~~t~~PVIg 135 (196)
-.-+...+.+|||-
T Consensus 225 ~~~le~~lg~PVid 238 (273)
T 2xed_A 225 VETAEREFGIPVLS 238 (273)
T ss_dssp HHHHHHHHSSCEEE
T ss_pred HHHHHHHhCCCEEc
Confidence 45555556788873
No 124
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=80.51 E-value=13 Score=31.45 Aligned_cols=79 Identities=9% Similarity=0.113 Sum_probs=56.8
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE-c----ccCCchHHHHHHHHH-hhCCCeEEEEecCC----CCchhH
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLSG 123 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~-S----aHR~p~~~~~~~~~~-e~~~~~V~IavAG~----sa~L~g 123 (196)
.+++.||... ++++.+.+-.+|..--+.+. . .|-.+..+.+.+.++ ++.++++|++++.. ++.+++
T Consensus 61 V~av~~G~~~----a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p 136 (255)
T 1efv_B 61 VIAVSCGPAQ----CQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQ 136 (255)
T ss_dssp EEEEEEESTT----HHHHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHH
T ss_pred EEEEEeCChh----HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcccCCchhhHHH
Confidence 5777888644 45555555567999777776 3 477788777766655 34467888887755 488999
Q ss_pred hhhhccCCcEEEe
Q 029271 124 VAAANSQILVIRV 136 (196)
Q Consensus 124 vvA~~t~~PVIgv 136 (196)
.+|+....|.+.-
T Consensus 137 ~lA~~L~~~~vt~ 149 (255)
T 1efv_B 137 MTAGFLDWPQGTF 149 (255)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHhCCCcccc
Confidence 9999999998854
No 125
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=80.22 E-value=12 Score=27.76 Aligned_cols=128 Identities=14% Similarity=0.107 Sum_probs=65.6
Q ss_pred CCeEEEEEcCCC---CHHHHHHHHHHHHHhCCCeEEEEEcccCC----chH--------HHHHHHHHhhCCCeEEEEecC
Q 029271 52 APIVGIIMESDL---DLPVMNDAARTLSDFGVPYEIKILPPHQN----CKE--------ALSYALSAKERGIKIIIVGDG 116 (196)
Q Consensus 52 ~~~V~IimGS~S---D~~~~~~~~~~l~~~gi~~ev~V~SaHR~----p~~--------~~~~~~~~e~~~~~V~IavAG 116 (196)
.+.|.|..||.. .....+++.+.|+.++. .+-+..-... ++. -.+++ ....+++||.=+|
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~--~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l---~~~~ad~~I~~~G 95 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIPQ--KVLWRFDGNKPDTLGLNTRLYKWIPQNDLL---GHPKTRAFITHGG 95 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSSS--EEEEECCSSCCTTCCTTEEEESSCCHHHHH---TSTTEEEEEECCC
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCCC--eEEEEECCcCcccCCCcEEEecCCCHHHHh---cCCCcCEEEEcCC
Confidence 356666677764 56677777777776654 3333221111 111 01222 1144799998655
Q ss_pred CCCchhHhh-hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHHHHHHHH
Q 029271 117 VEAHLSGVA-AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLERIRKY 193 (196)
Q Consensus 117 ~sa~L~gvv-A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~-~~~nAA~~AaqILa~-~d~~l~~kl~~~ 193 (196)
. ..+. |-..-.|+|.+|... +..+.. ....+ .|.++ + +. +..+...++..|..+ .|+.++++.+.+
T Consensus 96 ~----~t~~Ea~~~G~P~i~~p~~~-~Q~~na-~~l~~--~g~g~--~-~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~~ 164 (170)
T 2o6l_A 96 A----NGIYEAIYHGIPMVGIPLFA-DQPDNI-AHMKA--RGAAV--R-VDFNTMSSTDLLNALKRVINDPSYKENVMKL 164 (170)
T ss_dssp H----HHHHHHHHHTCCEEECCCST-THHHHH-HHHHT--TTSEE--E-CCTTTCCHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred c----cHHHHHHHcCCCEEeccchh-hHHHHH-HHHHH--cCCeE--E-eccccCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 3 2222 233679999999852 211111 11122 45433 2 23 112444555555444 688888888776
Q ss_pred Hh
Q 029271 194 VE 195 (196)
Q Consensus 194 r~ 195 (196)
++
T Consensus 165 ~~ 166 (170)
T 2o6l_A 165 SR 166 (170)
T ss_dssp C-
T ss_pred HH
Confidence 54
No 126
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=80.07 E-value=3.9 Score=32.65 Aligned_cols=84 Identities=11% Similarity=0.028 Sum_probs=50.9
Q ss_pred CCCeEEEEEcC-CCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh
Q 029271 51 DAPIVGIIMES-DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 126 (196)
Q Consensus 51 ~~~~V~IimGS-~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA 126 (196)
.+..|++++.+ .++ ....+.+.+.+++.|....+.. .+..++...++++.+..++++-+|........ ..+..
T Consensus 10 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~ 86 (289)
T 3g85_A 10 SKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVVI--CPYKTDCLHLEKGISKENSFDAAIIANISNYD-LEYLN 86 (289)
T ss_dssp -CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEEE--EEECTTCGGGCGGGSTTTCCSEEEESSCCHHH-HHHHH
T ss_pred CCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEEe--cCCCchhHHHHHHHHhccCCCEEEEecCCccc-HHHHH
Confidence 34689999974 333 3456677778888998766543 34445555566677777788766655433222 22332
Q ss_pred h-ccCCcEEEec
Q 029271 127 A-NSQILVIRVP 137 (196)
Q Consensus 127 ~-~t~~PVIgvP 137 (196)
. ...+||+.+=
T Consensus 87 ~~~~~iPvV~~~ 98 (289)
T 3g85_A 87 KASLTLPIILFN 98 (289)
T ss_dssp HCCCSSCEEEES
T ss_pred hccCCCCEEEEC
Confidence 2 3568988763
No 127
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=80.06 E-value=10 Score=31.92 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=56.3
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE-c----ccCCchHHHHHHHHH-hhCCCeEEEEecCC----CCchhH
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLSG 123 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~-S----aHR~p~~~~~~~~~~-e~~~~~V~IavAG~----sa~L~g 123 (196)
.+++.||... ++++.+.+-.+|..--+.+. . .|-.+..+.+.+.++ ++.++++|++++.. ++.+++
T Consensus 58 V~av~~G~~~----a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p 133 (252)
T 1efp_B 58 IIAVSIGVKQ----AAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQ 133 (252)
T ss_dssp EEEEEEESGG----GHHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHH
T ss_pred EEEEEeCChh----HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHH
Confidence 5777888644 44444444567999777776 3 366777777766655 34467888887755 488999
Q ss_pred hhhhccCCcEEEe
Q 029271 124 VAAANSQILVIRV 136 (196)
Q Consensus 124 vvA~~t~~PVIgv 136 (196)
.+|+....|.+.-
T Consensus 134 ~lA~~L~~~~vt~ 146 (252)
T 1efp_B 134 MLAAILGWAQATF 146 (252)
T ss_dssp HHHHHHTCEEEEE
T ss_pred HHHHHhCCCcccc
Confidence 9999999998854
No 128
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=78.88 E-value=11 Score=30.68 Aligned_cols=75 Identities=13% Similarity=0.019 Sum_probs=50.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhH-----h---hhhccCCcE
Q 029271 62 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG-----V---AAANSQILV 133 (196)
Q Consensus 62 ~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~g-----v---vA~~t~~PV 133 (196)
.......+++.+.++..|++++..+..... -...+++..+.++++.+|.+....+.+.. + +.-++..||
T Consensus 47 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~---~~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~~PV 123 (290)
T 3mt0_A 47 RDHSAALNDLAQELREEGYSVSTNQAWKDS---LHQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPV 123 (290)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEEECSSS---HHHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEEEeCCC---HHHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCCCCE
Confidence 556778888888899999999988863222 23445555556678877776655443332 2 334679999
Q ss_pred EEecCC
Q 029271 134 IRVPLL 139 (196)
Q Consensus 134 IgvP~~ 139 (196)
+-||..
T Consensus 124 lvv~~~ 129 (290)
T 3mt0_A 124 LMTKTA 129 (290)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 999954
No 129
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=78.65 E-value=4.4 Score=29.98 Aligned_cols=74 Identities=15% Similarity=0.034 Sum_probs=47.3
Q ss_pred CeEEEEEcCC---CCHHHHHHHHHHHHHhCCC---eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh
Q 029271 53 PIVGIIMESD---LDLPVMNDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 126 (196)
Q Consensus 53 ~~V~IimGS~---SD~~~~~~~~~~l~~~gi~---~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA 126 (196)
+.|.|.|-|+ ..=|+|.+++..|+++|++ |+..=.. ..+ +..+.+++ .+
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~--~~~-~~~~~l~~----------------------~s 70 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVL--EDP-ELREGIKE----------------------FS 70 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECT--TCH-HHHHHHHH----------------------HH
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEec--CCH-HHHHHHHH----------------------Hh
Confidence 4688888775 3578999999999999999 6543222 233 33333222 13
Q ss_pred hccCCcEEEecCCCCCCChhh-hhhhhc
Q 029271 127 ANSQILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 127 ~~t~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
|..+.|+|-+ .+...+|.| +..+.+
T Consensus 71 g~~tvP~vfI--~g~~iGG~d~l~~l~~ 96 (121)
T 3gx8_A 71 EWPTIPQLYV--NKEFIGGCDVITSMAR 96 (121)
T ss_dssp TCCSSCEEEE--TTEEEESHHHHHHHHH
T ss_pred CCCCCCeEEE--CCEEEecHHHHHHHHH
Confidence 4567888753 344567877 766554
No 130
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=78.45 E-value=7.8 Score=29.20 Aligned_cols=48 Identities=15% Similarity=0.069 Sum_probs=32.7
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCC-CeEEEEEcccCCchHHHHHHHHH
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALSA 103 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi-~~ev~V~SaHR~p~~~~~~~~~~ 103 (196)
..|+|+|=|+-+. ++|.++...|+.+|+ +|+..-..- . .++.+.++++
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~--~-~~~r~~l~~~ 71 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--D-PELRQGIKDY 71 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTS--C-HHHHHHHHHH
T ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccC--C-HHHHHHHHHh
Confidence 4699999776554 688999999999999 576543322 3 3455555544
No 131
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=78.34 E-value=4.8 Score=35.02 Aligned_cols=65 Identities=9% Similarity=-0.030 Sum_probs=51.0
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCc-hHHHHHHHHHhhCCCeEEEEecCCCCc
Q 029271 55 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAH 120 (196)
Q Consensus 55 V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p-~~~~~~~~~~e~~~~~V~IavAG~sa~ 120 (196)
...|.-+.||.+.++++.+.+++.|+.+...+..+++++ +++.++++.+++-|+.+ |.+++..+.
T Consensus 109 ~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~-i~l~DT~G~ 174 (345)
T 1nvm_A 109 VVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATC-IYMADSGGA 174 (345)
T ss_dssp EEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSE-EEEECTTCC
T ss_pred EEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE-EEECCCcCc
Confidence 334446889999999999999999999999998888886 67899999998888863 444444443
No 132
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=78.29 E-value=12 Score=26.30 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=26.7
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP 88 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S 88 (196)
...|.|.+.+ .=+.|++++..|+++|++|+..=..
T Consensus 15 ~~~v~vy~~~--~Cp~C~~ak~~L~~~~i~y~~idI~ 49 (99)
T 3qmx_A 15 SAKIEIYTWS--TCPFCMRALALLKRKGVEFQEYCID 49 (99)
T ss_dssp CCCEEEEECT--TCHHHHHHHHHHHHHTCCCEEEECT
T ss_pred CCCEEEEEcC--CChhHHHHHHHHHHCCCCCEEEEcC
Confidence 3467666554 4599999999999999999865443
No 133
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=78.14 E-value=7.9 Score=33.11 Aligned_cols=84 Identities=18% Similarity=0.236 Sum_probs=55.7
Q ss_pred CeEEEEEcCCCCH-HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc---
Q 029271 53 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN--- 128 (196)
Q Consensus 53 ~~V~IimGS~SD~-~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~--- 128 (196)
.++.||.-..|.- ...+++...|++.|+++++..+. .+....++++++..++++++|+ .|+.+.+-.++.+.
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~---~~~~~~~~~~~~~~~~~d~vvv-~GGDGTl~~v~~~l~~~ 105 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW---EKGDAARYVEEARKFGVATVIA-GGGDGTINEVSTALIQC 105 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC---STTHHHHHHHHHHHHTCSEEEE-EESHHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec---CcchHHHHHHHHHhcCCCEEEE-EccchHHHHHHHHHhhc
Confidence 3577765322221 66788999999999988877553 2445566666665566776654 57788887777775
Q ss_pred ---cCCcEEEecCCC
Q 029271 129 ---SQILVIRVPLLS 140 (196)
Q Consensus 129 ---t~~PVIgvP~~~ 140 (196)
+..|+-.+|.-+
T Consensus 106 ~~~~~~plgiiP~Gt 120 (332)
T 2bon_A 106 EGDDIPALGILPLGT 120 (332)
T ss_dssp CSSCCCEEEEEECSS
T ss_pred ccCCCCeEEEecCcC
Confidence 456876678754
No 134
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=78.08 E-value=12 Score=25.16 Aligned_cols=61 Identities=16% Similarity=0.182 Sum_probs=48.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCC---------eEEEEEcccCCchHHHHHHHHHhhCCCeEEEE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVP---------YEIKILPPHQNCKEALSYALSAKERGIKIIIV 113 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~---------~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~Ia 113 (196)
...-.|-.|+-+|.+.++....-|...|++ |.|+|- ...+.++..++.+++...|++.||.
T Consensus 7 ~~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~vG-pf~~~~~A~~~~~~L~~~g~~~~iv 76 (79)
T 1x60_A 7 SGLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQIG-AFSSKDNADTLAARAKNAGFDAIVI 76 (79)
T ss_dssp CCEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEEE-EESSHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEEC-CcCCHHHHHHHHHHHHHcCCceEEE
Confidence 346888999999999999999999988987 445553 5677788888888888878766653
No 135
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=77.92 E-value=7.3 Score=32.14 Aligned_cols=62 Identities=15% Similarity=0.183 Sum_probs=41.2
Q ss_pred CCeEEEEEc-CCCC----HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEec
Q 029271 52 APIVGIIME-SDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 115 (196)
Q Consensus 52 ~~~V~IimG-S~SD----~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA 115 (196)
+.+|+++.- +.+| ..+.+.+.+.++++|+ ++.++.....++...++++.+.+++++.||...
T Consensus 5 ~~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~ 71 (296)
T 2hqb_A 5 GGMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDV--DVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHG 71 (296)
T ss_dssp -CEEEEECCCC----CCTHHHHHHHHHHHHHSCC--EEEEECCCCSHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CcEEEEEECCCCCCCcHHHHHHHHHHHHHHHhCC--eEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 357888884 3555 3456677778889996 555565555556666788888888998777753
No 136
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=77.89 E-value=6.7 Score=27.95 Aligned_cols=65 Identities=20% Similarity=0.208 Sum_probs=38.3
Q ss_pred HHHHHHHHH----hCC-CeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCch-----hHh---hhhccCCcEEE
Q 029271 69 NDAARTLSD----FGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-----SGV---AAANSQILVIR 135 (196)
Q Consensus 69 ~~~~~~l~~----~gi-~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L-----~gv---vA~~t~~PVIg 135 (196)
+++.+.|++ .|+ +++..+.. . +-...+++.++..+++.+|.++-..+.+ +++ +.-++..||+-
T Consensus 60 ~~~~~~l~~~~~~~g~~~~~~~~~~--g--~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlv 135 (137)
T 2z08_A 60 ERAEGVLEEARALTGVPKEDALLLE--G--VPAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVLL 135 (137)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEE--S--SHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEe--c--CHHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCCCCEEE
Confidence 344444543 788 77776652 2 2344566666677788777665543333 332 33467889887
Q ss_pred ec
Q 029271 136 VP 137 (196)
Q Consensus 136 vP 137 (196)
||
T Consensus 136 v~ 137 (137)
T 2z08_A 136 VR 137 (137)
T ss_dssp EC
T ss_pred eC
Confidence 76
No 137
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=77.77 E-value=7 Score=28.95 Aligned_cols=74 Identities=14% Similarity=0.022 Sum_probs=47.2
Q ss_pred CeEEEEEcCC---CCHHHHHHHHHHHHHhCCC-eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc
Q 029271 53 PIVGIIMESD---LDLPVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 128 (196)
Q Consensus 53 ~~V~IimGS~---SD~~~~~~~~~~l~~~gi~-~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~ 128 (196)
+.|.|.|-|+ ..=|+|+++++.|+++|++ |+..=..- .+ +..+.++++ ++.
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~--d~-~~~~~l~~~----------------------tg~ 74 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DP-ELRQGIKDY----------------------SNW 74 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS--CH-HHHHHHHHH----------------------HTC
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC--CH-HHHHHHHHH----------------------hCC
Confidence 4688888765 3578999999999999995 87654432 23 333332221 245
Q ss_pred cCCcEEEecCCCCCCChhh-hhhhhc
Q 029271 129 SQILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 129 t~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
.+.|+|-+ .+...+|.| +..+.+
T Consensus 75 ~tvP~vfI--~g~~IGG~d~l~~l~~ 98 (118)
T 2wem_A 75 PTIPQVYL--NGEFVGGCDILLQMHQ 98 (118)
T ss_dssp CSSCEEEE--TTEEEESHHHHHHHHH
T ss_pred CCcCeEEE--CCEEEeChHHHHHHHH
Confidence 67888743 333467777 665544
No 138
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=77.69 E-value=19 Score=28.74 Aligned_cols=91 Identities=8% Similarity=-0.010 Sum_probs=59.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHH-HhCCCeEEEEEccc-----------CCchHHHHHHHHHhhCCCe-EEEEecCCCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLS-DFGVPYEIKILPPH-----------QNCKEALSYALSAKERGIK-IIIVGDGVEA 119 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~-~~gi~~ev~V~SaH-----------R~p~~~~~~~~~~e~~~~~-V~IavAG~sa 119 (196)
.+|+||.||.+.-....+..+.+. .+.-.+++.+.... ..|+.+.++.+..+. ++ +||+.--=..
T Consensus 3 k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~--aD~~ii~tPeYn~ 80 (190)
T 3u7r_A 3 KTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEH--SDAVLAITPEYNR 80 (190)
T ss_dssp EEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHT--SSEEEEECCCBTT
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHh--CCcEEEechhhcc
Confidence 479999999988777777666664 33334666666543 346677778777665 55 5555444455
Q ss_pred chhHhh----h---------hccCCcEEEecCCCCCCCh
Q 029271 120 HLSGVA----A---------ANSQILVIRVPLLSEDWSE 145 (196)
Q Consensus 120 ~L~gvv----A---------~~t~~PVIgvP~~~~~~~G 145 (196)
..||++ - ....+||.-+-.+.+..+|
T Consensus 81 s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~~Gg 119 (190)
T 3u7r_A 81 SYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGA 119 (190)
T ss_dssp BCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEEESSTTTT
T ss_pred cCCHHHHHHHHHhcccccCCccCCCEEEEEEeCCchhhH
Confidence 555554 2 3467899877776666666
No 139
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=77.64 E-value=11 Score=29.79 Aligned_cols=80 Identities=10% Similarity=0.131 Sum_probs=53.3
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh--
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 126 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-- 126 (196)
+..|++++.+.+|- ...+.+.+.+++.|+.+ -+...+..++...++++.+..++++-+|.... + +..+.
T Consensus 8 ~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~~-~---~~~~~~~ 81 (277)
T 3e61_A 8 SKLIGLLLPDMSNPFFTLIARGVEDVALAHGYQV--LIGNSDNDIKKAQGYLATFVSHNCTGMISTAF-N---ENIIENT 81 (277)
T ss_dssp --CEEEEESCTTSHHHHHHHHHHHHHHHHTTCCE--EEEECTTCHHHHHHHHHHHHHTTCSEEEECGG-G---HHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEE--EEEeCCCCHHHHHHHHHHHHhCCCCEEEEecC-C---hHHHHHH
Confidence 45799999877663 34556677788888754 46777888888888999888888976666552 2 22222
Q ss_pred -hccCCcEEEec
Q 029271 127 -ANSQILVIRVP 137 (196)
Q Consensus 127 -~~t~~PVIgvP 137 (196)
....+|||.+=
T Consensus 82 l~~~~iPvV~~~ 93 (277)
T 3e61_A 82 LTDHHIPFVFID 93 (277)
T ss_dssp HHHC-CCEEEGG
T ss_pred HHcCCCCEEEEe
Confidence 23477888653
No 140
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=77.62 E-value=6.9 Score=27.45 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=26.5
Q ss_pred eEEEEEcCC---CCHHHHHHHHHHHHHhCCCeEEEEE
Q 029271 54 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKIL 87 (196)
Q Consensus 54 ~V~IimGS~---SD~~~~~~~~~~l~~~gi~~ev~V~ 87 (196)
.|.|.+.|+ +.=++|+++...|+++|++|+..=.
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi 54 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDI 54 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEG
T ss_pred CEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEEC
Confidence 577777544 5668999999999999999875443
No 141
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=77.16 E-value=11 Score=27.68 Aligned_cols=71 Identities=11% Similarity=0.185 Sum_probs=50.6
Q ss_pred CeEEEEEcCCCCHHH--HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhcc-
Q 029271 53 PIVGIIMESDLDLPV--MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS- 129 (196)
Q Consensus 53 ~~V~IimGS~SD~~~--~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t- 129 (196)
.+|.++||+--=-.. .+++.+.+++.|+++++..++....++.. ..+++||...-.. ...
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~~~---------~~~DlIist~~l~--------~~~~ 84 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYM---------DGVHLICTTARVD--------RSFG 84 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTST---------TSCSEEEESSCCC--------CCST
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhhcc---------CCCCEEEECCccc--------cccC
Confidence 379999987666555 58999999999999999888887665421 2478888866544 122
Q ss_pred CCcEEE-ecCCC
Q 029271 130 QILVIR-VPLLS 140 (196)
Q Consensus 130 ~~PVIg-vP~~~ 140 (196)
..||+. .|..+
T Consensus 85 ~ipvi~v~~~l~ 96 (113)
T 1tvm_A 85 DIPLVHGMPFVS 96 (113)
T ss_dssp TCCEECCHHHHH
T ss_pred CCCEEEEeeccc
Confidence 568887 45544
No 142
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=76.89 E-value=13 Score=31.44 Aligned_cols=80 Identities=11% Similarity=0.062 Sum_probs=55.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---cCCchHHHHHHHHH-hhCCCeEEEEecCC----CCchhHh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---HQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLSGV 124 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa---HR~p~~~~~~~~~~-e~~~~~V~IavAG~----sa~L~gv 124 (196)
..+++.||... ++++.+.+-.+|..--+.+... |-.+..+.+.+.++ ++.+.++|++++.. ++.+++.
T Consensus 58 ~V~av~~G~~~----~~~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~ 133 (264)
T 1o97_C 58 EVVVVSVGPDR----VDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGIS 133 (264)
T ss_dssp EEEEEEESCGG----GHHHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHH
T ss_pred eEEEEEeCchh----HHHHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHH
Confidence 35777888643 4445444556799866777543 35677776666555 34468888887755 4789999
Q ss_pred hhhccCCcEEEe
Q 029271 125 AAANSQILVIRV 136 (196)
Q Consensus 125 vA~~t~~PVIgv 136 (196)
+|+....|.+.-
T Consensus 134 lA~~L~~~~vt~ 145 (264)
T 1o97_C 134 VASYLNWPHAAV 145 (264)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHhCCCcccc
Confidence 999999998844
No 143
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=75.89 E-value=6 Score=28.10 Aligned_cols=36 Identities=19% Similarity=0.202 Sum_probs=27.3
Q ss_pred CeEEEEEcCC---CCHHHHHHHHHHHHHhCCCeEEEEEc
Q 029271 53 PIVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILP 88 (196)
Q Consensus 53 ~~V~IimGS~---SD~~~~~~~~~~l~~~gi~~ev~V~S 88 (196)
.+|.|.+-++ +.=++|.+++..|+++|++|+..=..
T Consensus 15 ~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~ 53 (109)
T 1wik_A 15 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDIL 53 (109)
T ss_dssp SSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESS
T ss_pred CCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECC
Confidence 3577777644 55579999999999999998755443
No 144
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=74.58 E-value=5.7 Score=34.53 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=43.5
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHhCCC--eEEEEEcc-----cCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh-
Q 029271 56 GIIMESDLDLPVMNDAARTLSDFGVP--YEIKILPP-----HQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 127 (196)
Q Consensus 56 ~IimGS~SD~~~~~~~~~~l~~~gi~--~ev~V~Sa-----HR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~- 127 (196)
.+++|..-| -....++.||+. +++.+.+. ..+...+.++.+-++....+++++..+....+++.+++
T Consensus 58 ~~~tG~h~~-----~~~~~~~~~~i~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~ 132 (396)
T 3dzc_A 58 VCVTGQHRE-----MLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAY 132 (396)
T ss_dssp EEECCSSSH-----HHHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHH
T ss_pred EEEecccHH-----HHHHHHHhcCCCCceeeecCCCCCCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHH
Confidence 455555432 233345677773 45544211 11122233344444455679999998888778865554
Q ss_pred ccCCcEEEe
Q 029271 128 NSQILVIRV 136 (196)
Q Consensus 128 ~t~~PVIgv 136 (196)
....||+.+
T Consensus 133 ~~~IPv~h~ 141 (396)
T 3dzc_A 133 YQQIPVGHV 141 (396)
T ss_dssp TTTCCEEEE
T ss_pred HhCCCEEEE
Confidence 678999876
No 145
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=74.21 E-value=8.8 Score=32.39 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=57.3
Q ss_pred CeEEEEEcCCC----CHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc
Q 029271 53 PIVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 128 (196)
Q Consensus 53 ~~V~IimGS~S----D~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~ 128 (196)
.++.+|.--.| -....+++...|++.|+.+++..+ ..+....++++++.. +++++|+ +|+.+.|--++.+.
T Consensus 9 ~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t---~~~~~a~~~~~~~~~-~~d~vv~-~GGDGTl~~v~~~l 83 (304)
T 3s40_A 9 EKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHT---KEQGDATKYCQEFAS-KVDLIIV-FGGDGTVFECTNGL 83 (304)
T ss_dssp SSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEEC---CSTTHHHHHHHHHTT-TCSEEEE-EECHHHHHHHHHHH
T ss_pred CEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEc---cCcchHHHHHHHhhc-CCCEEEE-EccchHHHHHHHHH
Confidence 35666653333 246678899999999998887654 446677778887754 6776555 57788887777765
Q ss_pred ----cCCcEEEecCCC
Q 029271 129 ----SQILVIRVPLLS 140 (196)
Q Consensus 129 ----t~~PVIgvP~~~ 140 (196)
+..|+-.+|.-+
T Consensus 84 ~~~~~~~~l~iiP~Gt 99 (304)
T 3s40_A 84 APLEIRPTLAIIPGGT 99 (304)
T ss_dssp TTCSSCCEEEEEECSS
T ss_pred hhCCCCCcEEEecCCc
Confidence 456777778754
No 146
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=73.58 E-value=12 Score=26.86 Aligned_cols=62 Identities=15% Similarity=0.112 Sum_probs=35.0
Q ss_pred HHHHhCCCe-EEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh-------HhhhhccCCcEEEecCC
Q 029271 74 TLSDFGVPY-EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-------GVAAANSQILVIRVPLL 139 (196)
Q Consensus 74 ~l~~~gi~~-ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~-------gvvA~~t~~PVIgvP~~ 139 (196)
.++++|++. +..+..- +-...+++.++..+++.+|.++-..+.+. --+.-++..||+-||..
T Consensus 79 ~~~~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVlvv~~~ 148 (150)
T 3tnj_A 79 IGNTLGIDPAHRWLVWG----EPREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVLAVRLR 148 (150)
T ss_dssp HHHHHTCCGGGEEEEES----CHHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCSSEEEEEECC
T ss_pred HHHHcCCCcceEEEecC----CHHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCCCCEEEEeCC
Confidence 345679884 5555432 22345666666677887766654433332 22345678999999875
No 147
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=73.57 E-value=9.6 Score=31.09 Aligned_cols=67 Identities=13% Similarity=0.053 Sum_probs=38.5
Q ss_pred HHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCch-----hHh---hhhccCCcEEEecCC
Q 029271 70 DAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-----SGV---AAANSQILVIRVPLL 139 (196)
Q Consensus 70 ~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L-----~gv---vA~~t~~PVIgvP~~ 139 (196)
++.+.++..|++++..+...... ...+++.++..+++.+|.+.-..+.+ +++ +.-.+..||+-||..
T Consensus 77 ~~~~~~~~~~v~~~~~~~~~g~~---~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVlvv~~~ 151 (319)
T 3olq_A 77 QQARYYLEAGIQIDIKVIWHNRP---YEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCPAPVWMVKDK 151 (319)
T ss_dssp HHHHHHHHTTCCEEEEEEECSCH---HHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCSSCEEEEESS
T ss_pred HHHHHHhhcCCeEEEEEEecCCh---HHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCCCCEEEecCc
Confidence 33444445699988887632222 33455555556677666554433332 332 445789999999864
No 148
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=72.89 E-value=18 Score=24.08 Aligned_cols=47 Identities=13% Similarity=-0.022 Sum_probs=30.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHH
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 103 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~ 103 (196)
+.|.+...+ .=++|+++...|++.|++|+..=.. ..++...++.+.+
T Consensus 6 ~~v~ly~~~--~C~~C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~~~ 52 (92)
T 2khp_A 6 VDVIIYTRP--GCPYCARAKALLARKGAEFNEIDAS--ATPELRAEMQERS 52 (92)
T ss_dssp CCEEEEECT--TCHHHHHHHHHHHHTTCCCEEEEST--TSHHHHHHHHHHH
T ss_pred ccEEEEECC--CChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHHHh
Confidence 346565543 3489999999999999998754332 3444444454433
No 149
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=72.57 E-value=11 Score=26.90 Aligned_cols=65 Identities=15% Similarity=0.222 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhCCCe---EEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh-----Hh---hhhccCCcEEE
Q 029271 67 VMNDAARTLSDFGVPY---EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----GV---AAANSQILVIR 135 (196)
Q Consensus 67 ~~~~~~~~l~~~gi~~---ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~-----gv---vA~~t~~PVIg 135 (196)
..+++.+.++..|+++ +..+..- +-...+++.++..+++.+|.++-..+++. ++ +.-+++.||+-
T Consensus 71 ~l~~~~~~~~~~g~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlv 146 (147)
T 3hgm_A 71 IAVQAKTRATELGVPADKVRAFVKGG----RPSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVLV 146 (147)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEES----CHHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHhcCCCccceEEEEecC----CHHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCCCCEEE
Confidence 3455666677889988 7766532 23445666666777887777764433332 22 23356677763
No 150
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=72.31 E-value=14 Score=29.99 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhCCCeEE-EEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh--------hhhccCCcEEEecC
Q 029271 68 MNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPL 138 (196)
Q Consensus 68 ~~~~~~~l~~~gi~~ev-~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv--------vA~~t~~PVIgvP~ 138 (196)
.+++.+.++..|++++. .+.. .-.|.+.. ..+..+++.+|.++-..+.+... +.-.+..||+-||.
T Consensus 88 l~~~~~~~~~~g~~~~~~~v~~-~g~~~~~I----~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVlvv~~ 162 (294)
T 3loq_A 88 LPEVAQKIEAAGIKAEVIKPFP-AGDPVVEI----IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVYIFKH 162 (294)
T ss_dssp HHHHHHHHHHTTCEEEECSSCC-EECHHHHH----HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCSSCEEEECC
T ss_pred HHHHHHHHHHcCCCcceeEeec-cCChhHhe----eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCCCCEEEecC
Confidence 34555566677888776 4441 23343333 44566788777776655555443 34467899999997
Q ss_pred CC
Q 029271 139 LS 140 (196)
Q Consensus 139 ~~ 140 (196)
..
T Consensus 163 ~~ 164 (294)
T 3loq_A 163 DM 164 (294)
T ss_dssp CT
T ss_pred cc
Confidence 64
No 151
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=72.20 E-value=12 Score=31.23 Aligned_cols=27 Identities=15% Similarity=0.047 Sum_probs=15.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
+++|++|+|+.+ -+...+++.|-+-|.
T Consensus 8 ~gKvalVTGas~--GIG~aia~~la~~Ga 34 (255)
T 4g81_D 8 TGKTALVTGSAR--GLGFAYAEGLAAAGA 34 (255)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 357777777776 334445555555554
No 152
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=72.16 E-value=5 Score=35.11 Aligned_cols=67 Identities=12% Similarity=0.129 Sum_probs=39.4
Q ss_pred HHHHHHHhCCC--eEEEEEcc-c----CCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh-hccCCcEEEec
Q 029271 71 AARTLSDFGVP--YEIKILPP-H----QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-ANSQILVIRVP 137 (196)
Q Consensus 71 ~~~~l~~~gi~--~ev~V~Sa-H----R~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-~~t~~PVIgvP 137 (196)
....++.||+. +++.|.+. . .+...+.++.+-++....+++++..+....+++.++ .....||+.+-
T Consensus 71 ~~~~~~~~~i~~~~~l~v~~~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 71 LDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp CHHHHHHTTCCCSEECCCCC-CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHhcCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 33446778873 45544211 1 112233334444455567999998887777875444 46889998875
No 153
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=71.21 E-value=15 Score=26.75 Aligned_cols=71 Identities=14% Similarity=0.251 Sum_probs=48.4
Q ss_pred eEEEEEc---CCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh--c
Q 029271 54 IVGIIME---SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--N 128 (196)
Q Consensus 54 ~V~IimG---S~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~--~ 128 (196)
+|.++|| |+| -.++++.+.+++.|+++++.-++.....+.. . ++++|+...-..-.+.-+-.- .
T Consensus 5 kIll~Cg~G~sTS--~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~----~-----~~Dvil~~pqv~~~~~~~~~~~~~ 73 (106)
T 1e2b_A 5 HIYLFSSAGMSTS--LLVSKMRAQAEKYEVPVIIEAFPETLAGEKG----Q-----NADVVLLGPQIAYMLPEIQRLLPN 73 (106)
T ss_dssp EEEEECSSSTTTH--HHHHHHHHHHHHSCCSEEEEEECSSSTTHHH----H-----HCSEEEECTTSGGGHHHHHHHSSS
T ss_pred EEEEECCCchhHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhhc----c-----CCCEEEEccchhhhHHHHHHHhcC
Confidence 5888885 355 5888999999999999998888776655543 2 258888876666555554431 2
Q ss_pred cCCcEEE
Q 029271 129 SQILVIR 135 (196)
Q Consensus 129 t~~PVIg 135 (196)
.+.|||.
T Consensus 74 ~~v~vI~ 80 (106)
T 1e2b_A 74 KPVEVID 80 (106)
T ss_dssp SCCCBCC
T ss_pred CCceEEC
Confidence 3444543
No 154
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=71.17 E-value=13 Score=31.57 Aligned_cols=36 Identities=28% Similarity=0.303 Sum_probs=28.2
Q ss_pred CCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEec
Q 029271 79 GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 115 (196)
Q Consensus 79 gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA 115 (196)
++|.-+++. ..-+.+++.++++.+++.|++.|++..
T Consensus 211 ~~Pv~vKi~-~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 211 YVPIAVKIA-PDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp CCCEEEECC-SCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cCceEEEec-CCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 789888865 455667888999999999998777643
No 155
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=70.39 E-value=37 Score=26.69 Aligned_cols=119 Identities=12% Similarity=0.068 Sum_probs=62.9
Q ss_pred CCCeEEEEEcCCCC---HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh-
Q 029271 51 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 126 (196)
Q Consensus 51 ~~~~V~IimGS~SD---~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA- 126 (196)
.+.+|++++.+.+| ....+.+.+.+++.|.. +.+......++...++ +++-+|........ ..+.
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~~~~~~~~~-------~vdgiI~~~~~~~~--~~~~~ 75 (277)
T 3cs3_A 7 QTNIIGVYLADYGGSFYGELLEGIKKGLALFDYE--MIVCSGKKSHLFIPEK-------MVDGAIILDWTFPT--KEIEK 75 (277)
T ss_dssp CCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCE--EEEEESTTTTTCCCTT-------TCSEEEEECTTSCH--HHHHH
T ss_pred CCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCe--EEEEeCCCCHHHHhhc-------cccEEEEecCCCCH--HHHHH
Confidence 34589999876555 35666777888888865 4455444444332222 56655554433221 2222
Q ss_pred -hccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc------------CCHHHHHHHHHH
Q 029271 127 -ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI------------ADEDLLERIRKY 193 (196)
Q Consensus 127 -~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~------------~d~~l~~kl~~~ 193 (196)
.....||+.+=... ++..+..|+.|+-.++.+++-.++.. .+....+|++.|
T Consensus 76 l~~~~iPvV~~~~~~---------------~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf 140 (277)
T 3cs3_A 76 FAERGHSIVVLDRTT---------------EHRNIRQVLLDNRGGATQAIEQFVNVGSKKVLLLSGPEKGYDSQERLAVS 140 (277)
T ss_dssp HHHTTCEEEESSSCC---------------CSTTEEEEEECHHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred HHhcCCCEEEEecCC---------------CCCCCCEEEeCcHHHHHHHHHHHHHcCCceEEEEeCCccCccHHHHHHHH
Confidence 23568888752211 11124566667665555444444332 123445677766
Q ss_pred Hh
Q 029271 194 VE 195 (196)
Q Consensus 194 r~ 195 (196)
++
T Consensus 141 ~~ 142 (277)
T 3cs3_A 141 TR 142 (277)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 156
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=69.57 E-value=11 Score=28.56 Aligned_cols=74 Identities=15% Similarity=0.027 Sum_probs=45.5
Q ss_pred CeEEEEEcCC---CCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhcc
Q 029271 53 PIVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 129 (196)
Q Consensus 53 ~~V~IimGS~---SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t 129 (196)
.+|.|.+-|+ ..=++|.+++..|+++|++|+..=... .++...++.+ ..|..
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~--d~~~~~~L~~-----------------------~~G~~ 89 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ--NPDIRAELPK-----------------------YANWP 89 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG--CHHHHHHHHH-----------------------HHTCC
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC--CHHHHHHHHH-----------------------HHCCC
Confidence 3577777654 334799999999999999987654433 3433333322 12445
Q ss_pred CCcEEEecCCCCCCChhh-hhhhhc
Q 029271 130 QILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 130 ~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
++|+|-+ .+...+|.| +..+.+
T Consensus 90 tvP~VfI--~G~~iGG~d~l~~l~~ 112 (135)
T 2wci_A 90 TFPQLWV--DGELVGGCDIVIEMYQ 112 (135)
T ss_dssp SSCEEEE--TTEEEESHHHHHHHHH
T ss_pred CcCEEEE--CCEEEEChHHHHHHHH
Confidence 6777743 233457777 665554
No 157
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=69.44 E-value=4.6 Score=27.71 Aligned_cols=63 Identities=17% Similarity=0.010 Sum_probs=47.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCe---------EEEEEcccCCchHHHHHHHHHhhCCC-eEEEEecC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPY---------EIKILPPHQNCKEALSYALSAKERGI-KIIIVGDG 116 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~---------ev~V~SaHR~p~~~~~~~~~~e~~~~-~V~IavAG 116 (196)
..-.|-.|+.+|.+.+++...-|...|++. .|+| +...+-++..+..+++...|+ ..||..+|
T Consensus 8 ~~~~vQvGaF~~~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~v-Gpf~s~~~A~~~~~~L~~~g~~~~iv~~~~ 80 (81)
T 1uta_A 8 RRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVI-GPVKGKENADSTLNRLKMAGHTNCIRLAAG 80 (81)
T ss_dssp CBCCCBCCEESCHHHHHHHHHHHHHHTCCEEEEECSSSEEEEE-SSCBTTTHHHHHHHHHHHHCCSCCBCCCCC
T ss_pred ccEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEEeCCcEEEEEE-CCcCCHHHHHHHHHHHHHcCCCcEEEeCCC
Confidence 356677899999999999999999999874 3433 366777888888888887777 34444444
No 158
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=68.99 E-value=3.8 Score=40.39 Aligned_cols=45 Identities=13% Similarity=0.057 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCCCch-hHhhhh------ccCCcEEEecCC
Q 029271 95 EALSYALSAKERGIKIIIVGDGVEAHL-SGVAAA------NSQILVIRVPLL 139 (196)
Q Consensus 95 ~~~~~~~~~e~~~~~V~IavAG~sa~L-~gvvA~------~t~~PVIgvP~~ 139 (196)
...++++.+++.+++.+|++.|-...- +-.++- ...+||||||-.
T Consensus 471 ~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vIgiPkT 522 (787)
T 3o8o_A 471 DLGTIAYYFQKNKLDGLIILGGFEGFRSLKQLRDGRTQHPIFNIPMCLIPAT 522 (787)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTTCGGGGSCEEEEEBC
T ss_pred hHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHHhcCccCCceeecccc
Confidence 456788888999999888887753221 122221 136999999975
No 159
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=68.97 E-value=20 Score=23.00 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 103 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~ 103 (196)
+.=+.|+++...|++.|++|+..-.. ..++...++.+.+
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~~~ 47 (82)
T 1fov_A 9 ETCPYCHRAKALLSSKGVSFQELPID--GNAAKREEMIKRS 47 (82)
T ss_dssp SSCHHHHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHHHH
T ss_pred CCChhHHHHHHHHHHCCCCcEEEECC--CCHHHHHHHHHHh
Confidence 34589999999999999998764433 3455555555443
No 160
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=68.73 E-value=32 Score=27.18 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC-ch-----hHh---hhhccCCcEEEecC
Q 029271 68 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HL-----SGV---AAANSQILVIRVPL 138 (196)
Q Consensus 68 ~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa-~L-----~gv---vA~~t~~PVIgvP~ 138 (196)
.+++.+.++..|++++..+.. -.| ...+++. ..+++.+|.++-+.+ ++ +++ +.-++..||+-||.
T Consensus 76 l~~~~~~~~~~g~~~~~~~~~--g~~--~~~I~~~--~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~~PVlvv~~ 149 (268)
T 3ab8_A 76 LERVRQSALAAGVAVEAVLEE--GVP--HEAILRR--ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPG 149 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--ECH--HHHHHHH--HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCSSCEEEECS
T ss_pred HHHHHHHHHhCCCCeEEEEec--CCH--HHHHHhh--ccCCCEEEEeccCCCccccccccchhHHHHHHhCCCCEEEECC
Confidence 334455566779998887752 222 2334433 566876666654333 33 333 34568999999996
Q ss_pred CC
Q 029271 139 LS 140 (196)
Q Consensus 139 ~~ 140 (196)
..
T Consensus 150 ~~ 151 (268)
T 3ab8_A 150 EP 151 (268)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 161
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=67.78 E-value=14 Score=26.38 Aligned_cols=75 Identities=13% Similarity=0.056 Sum_probs=48.7
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCc
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 132 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~P 132 (196)
+.|.|.+. +-=|+|.+++..|+++|++|+..=..-+..+.++.+.+++. .|..+.|
T Consensus 17 ~~v~vy~~--~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~~----------------------~g~~tvP 72 (114)
T 3h8q_A 17 SRVVIFSK--SYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSEI----------------------TNQKTVP 72 (114)
T ss_dssp CSEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHHH----------------------HSCCSSC
T ss_pred CCEEEEEc--CCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHHH----------------------hCCCccC
Confidence 35777665 45699999999999999999876666555555554444321 1335677
Q ss_pred EEEecCCCCCCChhh-hhhhhc
Q 029271 133 VIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 133 VIgvP~~~~~~~G~D-LlS~lq 153 (196)
+|-+ .+...+|.| +..+.+
T Consensus 73 ~vfi--~g~~igG~d~l~~l~~ 92 (114)
T 3h8q_A 73 NIFV--NKVHVGGCDQTFQAYQ 92 (114)
T ss_dssp EEEE--TTEEEESHHHHHHHHH
T ss_pred EEEE--CCEEEeCHHHHHHHHH
Confidence 7754 333457777 655544
No 162
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=67.63 E-value=27 Score=24.62 Aligned_cols=63 Identities=13% Similarity=0.122 Sum_probs=39.0
Q ss_pred HHHHHHhCCCe-EEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhH---h---hhhccCCcEEEecCC
Q 029271 72 ARTLSDFGVPY-EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG---V---AAANSQILVIRVPLL 139 (196)
Q Consensus 72 ~~~l~~~gi~~-ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~g---v---vA~~t~~PVIgvP~~ 139 (196)
.+.++++|+++ +..+.. - +-...+++.++..+++.+|.++- .+.+.. + +.-++..||+-||..
T Consensus 70 ~~~~~~~~~~~~~~~~~~--g--~~~~~I~~~a~~~~~dliV~G~~-~~~~~~lgs~~~~vl~~~~~pVlvv~~~ 139 (141)
T 1jmv_A 70 LDLAESVDYPISEKLSGS--G--DLGQVLSDAIEQYDVDLLVTGHH-QDFWSKLMSSTRQVMNTIKIDMLVVPLR 139 (141)
T ss_dssp HHHHHHSSSCCCCEEEEE--E--CHHHHHHHHHHHTTCCEEEEEEC-CCCHHHHHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHHHHcCCCceEEEEec--C--CHHHHHHHHHHhcCCCEEEEeCC-CchhhhhcchHHHHHhcCCCCEEEeeCC
Confidence 34445678876 344432 1 23345566666778888888776 555543 2 234678999999864
No 163
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=67.33 E-value=43 Score=26.37 Aligned_cols=77 Identities=14% Similarity=-0.063 Sum_probs=45.8
Q ss_pred CCeEEEEEcCCC------------CHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC-CCeEEEEecCCC
Q 029271 52 APIVGIIMESDL------------DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE 118 (196)
Q Consensus 52 ~~~V~IimGS~S------------D~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~-~~~V~IavAG~s 118 (196)
.++|+||+=|+. |. ...-++..|+++|+....... .--.++.+.+.++++-.+ +++++|+-.|.+
T Consensus 15 ~~rv~IittGde~~~~~~~~G~i~Ds-n~~~L~~~l~~~G~~v~~~~i-v~Dd~~~I~~al~~a~~~~~~DlVittGG~s 92 (178)
T 2pjk_A 15 SLNFYVITISTSRYEKLLKKEPIVDE-SGDIIKQLLIENGHKIIGYSL-VPDDKIKILKAFTDALSIDEVDVIISTGGTG 92 (178)
T ss_dssp CCEEEEEEECHHHHHHHHTTCCCCCH-HHHHHHHHHHHTTCEEEEEEE-ECSCHHHHHHHHHHHHTCTTCCEEEEESCCS
T ss_pred CCEEEEEEeCcccccccccCCeEeeh-HHHHHHHHHHHCCCEEEEEEE-eCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 468999986541 32 223467788999986432222 223455555555555444 589999887765
Q ss_pred C----chhHhhhhccC
Q 029271 119 A----HLSGVAAANSQ 130 (196)
Q Consensus 119 a----~L~gvvA~~t~ 130 (196)
. ..+-+++....
T Consensus 93 ~g~~D~t~eal~~~~~ 108 (178)
T 2pjk_A 93 YSPTDITVETIRKLFD 108 (178)
T ss_dssp SSTTCCHHHHHGGGCS
T ss_pred CCCCcchHHHHHHHhc
Confidence 4 35666655433
No 164
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=67.00 E-value=16 Score=25.88 Aligned_cols=63 Identities=11% Similarity=0.163 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCC---eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCch-----hHh---hhhccCCcEEEec
Q 029271 70 DAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-----SGV---AAANSQILVIRVP 137 (196)
Q Consensus 70 ~~~~~l~~~gi~---~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L-----~gv---vA~~t~~PVIgvP 137 (196)
+..+.++++|++ ++..+.. - +-...+++.++..+++.+|.++-+ +++ +++ +.-++..||+-||
T Consensus 70 ~l~~~~~~~~~~~~~v~~~~~~--g--~~~~~I~~~a~~~~~dliV~G~~~-~~~~~~~~Gs~~~~v~~~~~~pVlvv~ 143 (143)
T 3fdx_A 70 QLKEIAKKFSIPEDRMHFHVAE--G--SPKDKILALAKSLPADLVIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 143 (143)
T ss_dssp HHHHHHTTSCCCGGGEEEEEEE--S--CHHHHHHHHHHHTTCSEEEEESSC-TTCCSCSSCHHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHcCCCCCceEEEEEe--c--ChHHHHHHHHHHhCCCEEEEeCCC-CCCeeeeeccHHHHHHHhCCCCEEEeC
Confidence 444555677765 3555542 2 334456666666788888888765 333 222 3346788998776
No 165
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=66.71 E-value=4.2 Score=35.58 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=27.2
Q ss_pred hHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcEEEecCC
Q 029271 94 KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 139 (196)
Q Consensus 94 ~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~ 139 (196)
+...+.++.+++.+++.+|.+.|-...=+...-+.-.+||||+|-.
T Consensus 80 e~~~~~~~~l~~~~Id~L~~IGGdgS~~~a~~l~~~~i~vigiPkT 125 (319)
T 4a3s_A 80 EGREKGIANLKKLGIEGLVVIGGDGSYMGAKKLTEHGFPCVGVPGT 125 (319)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHhccCCcEEEeecc
Confidence 3445556666666676666665543322222223456899999964
No 166
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=66.57 E-value=4.1 Score=41.24 Aligned_cols=45 Identities=18% Similarity=0.129 Sum_probs=31.3
Q ss_pred hHHHHHHHHHhhCCCeEEEEecCCCCchhH--hhhh------ccCCcEEEecCC
Q 029271 94 KEALSYALSAKERGIKIIIVGDGVEAHLSG--VAAA------NSQILVIRVPLL 139 (196)
Q Consensus 94 ~~~~~~~~~~e~~~~~V~IavAG~sa~L~g--vvA~------~t~~PVIgvP~~ 139 (196)
+...++++.+++.+++.+|++.|-.. +-+ -++- ...+||||||-.
T Consensus 675 ~~~~~i~~~l~~~~Id~LvvIGGdgS-~~~a~~L~~~~~~y~~~~I~vVGIPkT 727 (989)
T 3opy_A 675 DDMGTVAYYFQQYKFDGLIIIGGFEA-FTALYELDAARAQYPIFNIPMCCLPAT 727 (989)
T ss_dssp GGHHHHHHHHHHHTCSEEEEEESHHH-HHHHHHHHHHTTTCGGGCSCEEEEEBC
T ss_pred hhHHHHHHHHHHcCCCEEEEeCCchH-HHHHHHHHHHHhhCCCcCCcEEecccc
Confidence 46778888899999988888877532 222 2222 137899999975
No 167
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=66.41 E-value=53 Score=26.91 Aligned_cols=81 Identities=9% Similarity=-0.039 Sum_probs=54.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---------cCCchHHHHHHHH-H-hhCCC-eEEEEecCCCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------HQNCKEALSYALS-A-KERGI-KIIIVGDGVEA 119 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa---------HR~p~~~~~~~~~-~-e~~~~-~V~IavAG~sa 119 (196)
..+|+|++ +...+.-+...+.|++.|+++-. ..+. .-.++.+.+++++ + ...|+ -||+.|.++..
T Consensus 117 ~~rvgllt--py~~~~~~~~~~~l~~~Giev~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~l~~ 193 (240)
T 3ixl_A 117 VRRVALAT--AYIDDVNERLAAFLAEESLVPTG-CRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGGLLT 193 (240)
T ss_dssp CSEEEEEE--SSCHHHHHHHHHHHHHTTCEEEE-EEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTTSCC
T ss_pred CCEEEEEe--CChHHHHHHHHHHHHHCCCEEec-cccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCCCch
Confidence 46899996 35566677778899999996432 2221 3357788888888 6 66778 58888888764
Q ss_pred ch-hHhhhhccCCcEEE
Q 029271 120 HL-SGVAAANSQILVIR 135 (196)
Q Consensus 120 ~L-~gvvA~~t~~PVIg 135 (196)
.. -.-+-..+.+|||-
T Consensus 194 l~~i~~le~~lg~PVid 210 (240)
T 3ixl_A 194 LDAIPEVERRLGVPVVS 210 (240)
T ss_dssp TTHHHHHHHHHSSCEEE
T ss_pred hhhHHHHHHHhCCCEEe
Confidence 42 23344556788863
No 168
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=65.77 E-value=16 Score=25.79 Aligned_cols=52 Identities=4% Similarity=-0.102 Sum_probs=32.2
Q ss_pred CeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcEEEec
Q 029271 81 PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 137 (196)
Q Consensus 81 ~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIgvP 137 (196)
+++..+.. - +-...+++.++..+++.+|.++-+. ..+.-+.-++..||+-||
T Consensus 87 ~~~~~~~~--g--~~~~~I~~~a~~~~~dliV~G~~g~-sv~~~vl~~a~~PVlvv~ 138 (138)
T 1q77_A 87 IPGVEYRI--G--PLSEEVKKFVEGKGYELVVWACYPS-AYLCKVIDGLNLASLIVK 138 (138)
T ss_dssp CCCEEEEC--S--CHHHHHHHHHTTSCCSEEEECSCCG-GGTHHHHHHSSSEEEECC
T ss_pred cceEEEEc--C--CHHHHHHHHHHhcCCCEEEEeCCCC-chHHHHHHhCCCceEeeC
Confidence 56665542 2 3344566767777888777655433 444455567888988775
No 169
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=65.52 E-value=62 Score=27.39 Aligned_cols=77 Identities=16% Similarity=0.161 Sum_probs=39.1
Q ss_pred CeEEEEecCCCCchhHhhhhccCCcEEEecCCCCCCChhhh--hhhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CC
Q 029271 108 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDV--INSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-AD 183 (196)
Q Consensus 108 ~~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~~~~~~G~DL--lS~lqmPsGvpvatV~I~-~~~nAA~~AaqILa~-~d 183 (196)
++++|+=+|. +.+. =+...-+|+|-+|.+...-+-+.. ....+ .|. +.+ |. +..++..++..|..+ .|
T Consensus 253 aDlvI~raG~-~Tv~--E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~--~G~--a~~-l~~~~~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 253 ADLVICRAGA-LTVS--ELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR--SGA--GRL-LPQKSTGAAELAAQLSEVLMH 324 (365)
T ss_dssp CSEEEECCCH-HHHH--HHHHHTCCEEECC-----CCHHHHHHHHHHT--TTS--EEE-CCTTTCCHHHHHHHHHHHHHC
T ss_pred ceEEEecCCc-chHH--HHHHhCCCeEEeccCCCCCcHHHHHHHHHHH--CCC--EEE-eecCCCCHHHHHHHHHHHHCC
Confidence 5788876652 1121 223467899999987532222222 22333 454 444 33 444677777777664 67
Q ss_pred HHHHHHHHH
Q 029271 184 EDLLERIRK 192 (196)
Q Consensus 184 ~~l~~kl~~ 192 (196)
++.+++++.
T Consensus 325 ~~~~~~m~~ 333 (365)
T 3s2u_A 325 PETLRSMAD 333 (365)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776666543
No 170
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=65.33 E-value=4.6 Score=35.54 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=30.0
Q ss_pred chHHHHHHHHHhhCCCeEEEEecCCCCch-hHhhhhccCCcEEEecCC
Q 029271 93 CKEALSYALSAKERGIKIIIVGDGVEAHL-SGVAAANSQILVIRVPLL 139 (196)
Q Consensus 93 p~~~~~~~~~~e~~~~~V~IavAG~sa~L-~gvvA~~t~~PVIgvP~~ 139 (196)
++...+.++++++.+++.+|++.|-...- +-.+ +.-.+||||+|-.
T Consensus 80 ~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L-~~~~i~vvgiPkT 126 (320)
T 1pfk_A 80 ENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRL-TEMGFPCIGLPGT 126 (320)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHH-HHTTCCEEEEEBC
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCchHHHHHHH-HhhCCCEEEEecc
Confidence 44566777777787887777776653222 2223 2357999999975
No 171
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=65.00 E-value=24 Score=28.64 Aligned_cols=67 Identities=13% Similarity=0.043 Sum_probs=42.8
Q ss_pred CCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccC-----------------------CchHHHHHHHHHhhC-
Q 029271 51 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ-----------------------NCKEALSYALSAKER- 106 (196)
Q Consensus 51 ~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR-----------------------~p~~~~~~~~~~e~~- 106 (196)
-..++++|+|.++.-.+...+++.|.+-|. .+-+++-.+ .++.+.+++++..+.
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 346899999988765667778888888785 344433222 234445555554432
Q ss_pred -CCeEEEEecCCCC
Q 029271 107 -GIKIIIVGDGVEA 119 (196)
Q Consensus 107 -~~~V~IavAG~sa 119 (196)
.++++|-.||...
T Consensus 102 g~id~li~nAg~~~ 115 (280)
T 3nrc_A 102 DGLDAIVHSIAFAP 115 (280)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 4688998888653
No 172
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=64.94 E-value=5 Score=35.26 Aligned_cols=46 Identities=17% Similarity=0.086 Sum_probs=27.2
Q ss_pred chHHHHHHHHHhhCCCeEEEEecCCCCch-hHhhhhccCCcEEEecCC
Q 029271 93 CKEALSYALSAKERGIKIIIVGDGVEAHL-SGVAAANSQILVIRVPLL 139 (196)
Q Consensus 93 p~~~~~~~~~~e~~~~~V~IavAG~sa~L-~gvvA~~t~~PVIgvP~~ 139 (196)
++...+.++++++.+++.+|++.|-...- +-.++ .-.+||||+|-.
T Consensus 79 ~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~-~~~i~vvgiPkT 125 (319)
T 1zxx_A 79 EEGQLAGIEQLKKHGIDAVVVIGGDGSYHGALQLT-RHGFNSIGLPGT 125 (319)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHH-HTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHH-HhCCCEEEEeec
Confidence 34555666666666676666665542221 22222 347999999975
No 173
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=64.64 E-value=12 Score=24.96 Aligned_cols=32 Identities=22% Similarity=0.160 Sum_probs=24.5
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL 87 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~ 87 (196)
+|.+...+ .=+.|+++...|+++|++|+..-.
T Consensus 13 ~v~ly~~~--~Cp~C~~~~~~L~~~gi~~~~~~v 44 (92)
T 3ic4_A 13 EVLMYGLS--TCPHCKRTLEFLKREGVDFEVIWI 44 (92)
T ss_dssp SSEEEECT--TCHHHHHHHHHHHHHTCCCEEEEG
T ss_pred eEEEEECC--CChHHHHHHHHHHHcCCCcEEEEe
Confidence 45555443 449999999999999999986544
No 174
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=64.14 E-value=15 Score=24.49 Aligned_cols=31 Identities=19% Similarity=0.161 Sum_probs=22.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEE
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIK 85 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~ 85 (196)
+.|.+.+. +.=+.|++++..|++.|++|+..
T Consensus 6 ~~v~~y~~--~~C~~C~~~~~~L~~~~i~~~~v 36 (89)
T 2klx_A 6 KEIILYTR--PNCPYCKRARDLLDKKGVKYTDI 36 (89)
T ss_dssp CCEEEESC--SCCTTTHHHHHHHHHHTCCEEEE
T ss_pred ceEEEEEC--CCChhHHHHHHHHHHcCCCcEEE
Confidence 34555543 34489999999999999998743
No 175
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=63.92 E-value=6.3 Score=39.69 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCCCchhHh--hhh------ccCCcEEEecCC
Q 029271 95 EALSYALSAKERGIKIIIVGDGVEAHLSGV--AAA------NSQILVIRVPLL 139 (196)
Q Consensus 95 ~~~~~~~~~e~~~~~V~IavAG~sa~L~gv--vA~------~t~~PVIgvP~~ 139 (196)
...++++++++.+++.+|++.|-. .+-+. ++- ...+||||+|-.
T Consensus 650 ~~~~i~~~l~~~~Id~LvvIGGdg-S~~~a~~L~~~~~~~~~~~i~vVGIPkT 701 (941)
T 3opy_B 650 DIGMIAYFFEKYGFDGLILVGGFE-AFISLHQLERARINYPSLRIPLVLIPAT 701 (941)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESHH-HHHHHHHHHHGGGTCGGGCSCEEEEEBC
T ss_pred hHHHHHHHHHHcCCCEEEEeCCch-HHHHHHHHHHHHHhcCccCCcEEeeecc
Confidence 466788899999999888887753 22222 211 136999999975
No 176
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=63.82 E-value=30 Score=28.44 Aligned_cols=60 Identities=10% Similarity=0.067 Sum_probs=44.7
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh--------------CCCeEEEEecCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--------------RGIKIIIVGDGV 117 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~--------------~~~~V~IavAG~ 117 (196)
..+.++|.|. . .....+...|.+.| +++.|. .|++++..++.+++.. .+++++|..+|.
T Consensus 118 ~~k~vlViGa-G--g~g~a~a~~L~~~G--~~V~v~--~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~ 190 (271)
T 1nyt_A 118 PGLRILLIGA-G--GASRGVLLPLLSLD--CAVTIT--NRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSS 190 (271)
T ss_dssp TTCEEEEECC-S--HHHHHHHHHHHHTT--CEEEEE--CSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSC
T ss_pred CCCEEEEECC-c--HHHHHHHHHHHHcC--CEEEEE--ECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCC
Confidence 3467788887 3 68889999999999 466664 6999998888876532 256788888775
Q ss_pred C
Q 029271 118 E 118 (196)
Q Consensus 118 s 118 (196)
.
T Consensus 191 ~ 191 (271)
T 1nyt_A 191 G 191 (271)
T ss_dssp G
T ss_pred C
Confidence 4
No 177
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=63.57 E-value=45 Score=26.87 Aligned_cols=27 Identities=19% Similarity=0.041 Sum_probs=16.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+.+ -+...+++.|-+-|.
T Consensus 14 ~gk~~lVTGas~--gIG~a~a~~la~~G~ 40 (280)
T 3pgx_A 14 QGRVAFITGAAR--GQGRSHAVRLAAEGA 40 (280)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 356777777776 344555555555554
No 178
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=63.25 E-value=46 Score=26.07 Aligned_cols=68 Identities=13% Similarity=0.178 Sum_probs=38.8
Q ss_pred CCCCeEEEEEcCC-------CCHHHHHHHHHHHH---HhCCCeEEEEEcccCCchHHHHHHHHHhhC-CCeEEEEecCCC
Q 029271 50 ADAPIVGIIMESD-------LDLPVMNDAARTLS---DFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE 118 (196)
Q Consensus 50 ~~~~~V~IimGS~-------SD~~~~~~~~~~l~---~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~-~~~V~IavAG~s 118 (196)
+..++|+||+=|+ -|.. ..-++..|+ ++|+.....+ .--.++.+.+.++++-++ .++++|+-.|.+
T Consensus 3 ~~~~rv~IistGdE~~~G~i~Dsn-~~~l~~~l~~l~~~G~~v~~~i--v~Dd~~~I~~~l~~~~~~~~~DlVittGG~g 79 (178)
T 2pbq_A 3 EKKAVIGVVTISDRASKGIYEDIS-GKAIIDYLKDVIITPFEVEYRV--IPDERDLIEKTLIELADEKGCSLILTTGGTG 79 (178)
T ss_dssp --CCEEEEEEECHHHHHTSSCCHH-HHHHHHHHHHHBCSCCEEEEEE--ECSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CCCCEEEEEEeCCcCCCCCeecch-HHHHHHHHHHHHhCCCEEEEEE--cCCCHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 4457899987443 3433 234566666 7898653332 223444555555555442 689999888875
Q ss_pred Cc
Q 029271 119 AH 120 (196)
Q Consensus 119 a~ 120 (196)
-+
T Consensus 80 ~g 81 (178)
T 2pbq_A 80 PA 81 (178)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 179
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=62.52 E-value=13 Score=27.04 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=45.9
Q ss_pred CeEEEEEcCC--CCHHHHHHHHHHHHHhCCC-eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhcc
Q 029271 53 PIVGIIMESD--LDLPVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 129 (196)
Q Consensus 53 ~~V~IimGS~--SD~~~~~~~~~~l~~~gi~-~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t 129 (196)
.+|.++||+- |=.=..+++++.+++.|++ +++..++.+. +.++ . ..+++||...-...-+. .+.
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~----~~~~---~--~~~DlIi~t~~l~~~~~----~~~ 85 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGE----AKGL---A--SNYDIVVASNHLIHELD----GRT 85 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHH----HHHH---G--GGCSEEEEETTTGGGTT----TSC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHH----Hhhc---c--CCCcEEEECCchHHHhC----cCC
Confidence 3688998764 3333444888999999999 8888887743 3222 1 23788888655443332 233
Q ss_pred CCcEEEecC
Q 029271 130 QILVIRVPL 138 (196)
Q Consensus 130 ~~PVIgvP~ 138 (196)
..||+++-.
T Consensus 86 ~~~vi~i~~ 94 (110)
T 3czc_A 86 NGKLIGLDN 94 (110)
T ss_dssp SSEEEEESS
T ss_pred CceEEEeec
Confidence 456776544
No 180
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=62.48 E-value=60 Score=26.34 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=47.7
Q ss_pred EEEEcCCCCHH---HHHHHHHHHHHhCCCeEEEEE--ccc----CCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh--
Q 029271 56 GIIMESDLDLP---VMNDAARTLSDFGVPYEIKIL--PPH----QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV-- 124 (196)
Q Consensus 56 ~IimGS~SD~~---~~~~~~~~l~~~gi~~ev~V~--SaH----R~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv-- 124 (196)
.+..|+.++-. ..+++.+.++++|+++.+.+. +.| .+++...+..+.++..|++.+.+.- ...+..+
T Consensus 119 ~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~--~~~~~~l~~ 196 (273)
T 2qjg_A 119 HVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSY--TGDIDSFRD 196 (273)
T ss_dssp EEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC--CSSHHHHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC--CCCHHHHHH
Confidence 45678776554 456667777789999877542 223 3456666666778888898544431 1222222
Q ss_pred hhhccCCcEEEec
Q 029271 125 AAANSQILVIRVP 137 (196)
Q Consensus 125 vA~~t~~PVIgvP 137 (196)
+...+..|||...
T Consensus 197 i~~~~~ipvva~G 209 (273)
T 2qjg_A 197 VVKGCPAPVVVAG 209 (273)
T ss_dssp HHHHCSSCEEEEC
T ss_pred HHHhCCCCEEEEe
Confidence 2334577887643
No 181
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=62.25 E-value=45 Score=25.65 Aligned_cols=66 Identities=15% Similarity=0.033 Sum_probs=39.5
Q ss_pred CCeEEEEEcCCC------------CHHHHHHHHHHHHHhCCCeE-EEEEcccCCchHHHHHHHHHh-hCCCeEEEEecCC
Q 029271 52 APIVGIIMESDL------------DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAK-ERGIKIIIVGDGV 117 (196)
Q Consensus 52 ~~~V~IimGS~S------------D~~~~~~~~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~~e-~~~~~V~IavAG~ 117 (196)
+.+|+||+-|++ |. -..-+++.|+++|+.+. .++. -=.++.+.+-+++.. .+.++++|+-.|.
T Consensus 15 ~~~v~iitvsd~~~~~~~~~g~i~D~-ng~~L~~~L~~~G~~v~~~~iV--~Dd~~~i~~al~~~~a~~~~DlVittGG~ 91 (178)
T 3iwt_A 15 SLNFYVITISTSRYEKLLKKEPIVDE-SGDIIKQLLIENGHKIIGYSLV--PDDKIKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp CCEEEEEEECHHHHHHHHTTCCCCCH-HHHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred CCEEEEEEEcCCCccccccCCCCCcc-hHHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEecCCc
Confidence 358999987653 32 12346788999998643 3332 223334444333333 3457999998887
Q ss_pred CCc
Q 029271 118 EAH 120 (196)
Q Consensus 118 sa~ 120 (196)
+-+
T Consensus 92 g~~ 94 (178)
T 3iwt_A 92 GYS 94 (178)
T ss_dssp SSS
T ss_pred ccC
Confidence 654
No 182
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=61.47 E-value=35 Score=27.82 Aligned_cols=67 Identities=13% Similarity=0.134 Sum_probs=40.9
Q ss_pred HHHHHHHHHHh-----CCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchh-----Hh---hhhccCCcEE
Q 029271 68 MNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----GV---AAANSQILVI 134 (196)
Q Consensus 68 ~~~~~~~l~~~-----gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~-----gv---vA~~t~~PVI 134 (196)
.+++.+.+++. |++++..+.. . +-...+++..+ +++.+|.++-..+.+. ++ +.-++..||+
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~-g---~~~~~I~~~a~--~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 157 (309)
T 3cis_A 84 IDDALKVVEQASLRAGPPTVHSEIVP-A---AAVPTLVDMSK--DAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVV 157 (309)
T ss_dssp HHHHHHHHHHHCSSSCCSCEEEEEES-S---CHHHHHHHHGG--GEEEEEEESSCTTCCTTCCSCHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHhcccCCCceEEEEEec-C---CHHHHHHHHhc--CCCEEEECCCCCccccccccCcHHHHHHHhCCCCEE
Confidence 44555666665 8998887763 2 22334444443 5887777665444433 22 3456799999
Q ss_pred EecCCC
Q 029271 135 RVPLLS 140 (196)
Q Consensus 135 gvP~~~ 140 (196)
-||...
T Consensus 158 vv~~~~ 163 (309)
T 3cis_A 158 IIHDED 163 (309)
T ss_dssp EECTTC
T ss_pred EEcCCc
Confidence 999764
No 183
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=61.44 E-value=36 Score=27.25 Aligned_cols=27 Identities=7% Similarity=0.058 Sum_probs=19.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ .+...+++.|.+-|.
T Consensus 6 ~~k~vlVTGas~--GIG~aia~~l~~~G~ 32 (252)
T 3h7a_A 6 RNATVAVIGAGD--YIGAEIAKKFAAEGF 32 (252)
T ss_dssp CSCEEEEECCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 357888888887 456677777776675
No 184
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=60.98 E-value=24 Score=28.54 Aligned_cols=65 Identities=12% Similarity=0.145 Sum_probs=40.1
Q ss_pred HHHHHHHhCCC-eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh--------hhhccCCcEEEecCC
Q 029271 71 AARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPLL 139 (196)
Q Consensus 71 ~~~~l~~~gi~-~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv--------vA~~t~~PVIgvP~~ 139 (196)
..+.++++|++ ++..+..- . -...+++.++..+++.+|.++-+-+++..+ +.-+++.||+-+|+.
T Consensus 204 l~~~~~~~g~~~~~~~v~~g--~--~~~~I~~~a~~~~~dLiVmG~~g~~~~~~~~~Gsv~~~vl~~~~~pVLvv~~~ 277 (290)
T 3mt0_A 204 CRTFQAEYGFSDEQLHIEEG--P--ADVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPD 277 (290)
T ss_dssp HHHHHHHHTCCTTTEEEEES--C--HHHHHHHHHHHHTCSEEEEECCSSCCGGGCCSCHHHHHHHTTCSSEEEEECCH
T ss_pred HHHHHHHcCCCcceEEEecc--C--HHHHHHHHHHhcCCCEEEECCCCCcCCcceecchHHHHHHhcCCCCEEEECCC
Confidence 34456678984 45555432 2 334455556666788777776655555432 234689999999875
No 185
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=60.77 E-value=7.1 Score=32.01 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=43.8
Q ss_pred CeEEEEEcCCCCHH-----HHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEec-C---CCCchhH
Q 029271 53 PIVGIIMESDLDLP-----VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD-G---VEAHLSG 123 (196)
Q Consensus 53 ~~V~IimGS~SD~~-----~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA-G---~sa~L~g 123 (196)
-+|+|++|+.|+.- ....+.+.|++.| |++...........+.+ . ..+++++... | ....+.+
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g--~~v~~i~~~~~~~~~~~----~--~~~D~v~~~~~~~~ge~~~~~~ 75 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNK--YEIVPITLNEKMDLIEK----A--KDIDFALLALHGKYGEDGTVQG 75 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTT--EEEEEEECSSGGGHHHH----T--TTCSEEEECCCSHHHHSSHHHH
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCC--CEEEEEcccCchhHHHh----c--cCCCEEEEeCCCCCCcHHHHHH
Confidence 48999999988643 3445555556666 56666655533333222 1 3466555443 3 3344455
Q ss_pred hhhhccCCcEEEecCCC
Q 029271 124 VAAANSQILVIRVPLLS 140 (196)
Q Consensus 124 vvA~~t~~PVIgvP~~~ 140 (196)
++. ....|++|.++..
T Consensus 76 ~le-~~gi~~~g~~~~~ 91 (307)
T 3r5x_A 76 TLE-SLGIPYSGSNMLS 91 (307)
T ss_dssp HHH-HHTCCBSSSCHHH
T ss_pred HHH-HcCCCeeCcCHHH
Confidence 543 3456787776543
No 186
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=60.65 E-value=57 Score=26.65 Aligned_cols=82 Identities=11% Similarity=0.063 Sum_probs=51.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEE--EcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc-
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKI--LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN- 128 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V--~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~- 128 (196)
..+|+.|.|..... ..+--...+++.|.+ ++.+ .+.+-.++.-.+..+++-+.++++|++.++..+ ++-+-+..
T Consensus 126 ~~~Ig~i~g~~~~~-r~~Gf~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~D~~a-~Gv~~a~~e 202 (296)
T 2hqb_A 126 THKVGVIAAFPWQP-EVEGFVDGAKYMNES-EAFVRYVGEWTDADKALELFQELQKEQVDVFYPAGDGYH-VPVVEAIKD 202 (296)
T ss_dssp SSEEEEEESCTTCH-HHHHHHHHHHHTTCC-EEEEEECSSSSCHHHHHHHHHHHHTTTCCEEECCCTTTH-HHHHHHHHH
T ss_pred CCeEEEEcCcCchh-hHHHHHHHHHHhCCC-eEEEEeeccccCHHHHHHHHHHHHHCCCcEEEECCCCCC-HHHHHHHHH
Confidence 46899999876554 566667788899987 6544 233445666666666665667899998877643 22222221
Q ss_pred cCCcEEEe
Q 029271 129 SQILVIRV 136 (196)
Q Consensus 129 t~~PVIgv 136 (196)
.-+-|||+
T Consensus 203 ~Gv~viG~ 210 (296)
T 2hqb_A 203 QGDFAIGY 210 (296)
T ss_dssp HTCEEEEE
T ss_pred cCCEEEEE
Confidence 22556665
No 187
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=60.26 E-value=31 Score=27.35 Aligned_cols=115 Identities=15% Similarity=0.061 Sum_probs=59.7
Q ss_pred eEEEEEcCCCCHH---HHHHHHHHHHHhCCCeEEE-EEcccCCchHHHHHHHHHhhC----CCeEEEEecCCCCchhHhh
Q 029271 54 IVGIIMESDLDLP---VMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSAKER----GIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 54 ~V~IimGS~SD~~---~~~~~~~~l~~~gi~~ev~-V~SaHR~p~~~~~~~~~~e~~----~~~V~IavAG~sa~L~gvv 125 (196)
+|+++.|...... ..+-..+.|++.|++++.. +....-.++...+.++++-.+ ..+.|++..... ++ |++
T Consensus 142 ~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~~~d~~-a~-g~~ 219 (309)
T 2fvy_A 142 QFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAM-AM-GAV 219 (309)
T ss_dssp EEEEEECSTTCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTCHHHHHHHHHHHHTSTTGGGCCEEEESSHHH-HH-HHH
T ss_pred EEEEEEcCCCCccHHHHHHHHHHHHHhcCCceEEEEEecCCCCHHHHHHHHHHHHHhCCCCCccEEEECCchh-HH-HHH
Confidence 6899988755433 3445667888999987643 333333555555555554332 467787754321 22 233
Q ss_pred hhc----c-CCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 029271 126 AAN----S-QILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVL 179 (196)
Q Consensus 126 A~~----t-~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqIL 179 (196)
.+. - .++|||+ ++.. ++...++.|.+.+||..+ ++.-|..|++.|
T Consensus 220 ~al~~~g~~di~vig~-------d~~~-~~~~~~~~g~~lttv~~~-~~~~g~~a~~~l 269 (309)
T 2fvy_A 220 EALKAHNKSSIPVFGV-------DALP-EALALVKSGALAGTVLND-ANNQAKATFDLA 269 (309)
T ss_dssp HHHHHTTCTTSCEECS-------BCCH-HHHHHHHHTSSCBEEECC-HHHHHHHHHHHH
T ss_pred HHHHHcCCCCceEEec-------CCCH-HHHHHHHcCCceEEEecC-HHHHHHHHHHHH
Confidence 222 2 5666653 2222 221112234456888544 445555555543
No 188
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=60.19 E-value=43 Score=28.17 Aligned_cols=124 Identities=14% Similarity=0.051 Sum_probs=76.8
Q ss_pred cccCCccchhhhhhhhhhhhccccCCCCCccccc----ccc-------c-cccccCCCCeEEEEEcCCCCHHHHHHHHH-
Q 029271 7 NHQLSSRKKTLMVTLQLLRCQIVYVPAACPSTKS----CLP-------R-FLLLAADAPIVGIIMESDLDLPVMNDAAR- 73 (196)
Q Consensus 7 ~~~~~sgdk~l~~dkq~yr~l~~vt~~~~~~vk~----v~~-------~-~~~~~~~~~~V~IimGS~SD~~~~~~~~~- 73 (196)
+|=|=+=+.-...=+.....|.+.+|+.-+...+ ... + .....+-+.+..|++=. +..
T Consensus 121 PHvWldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~---------af~Y 191 (286)
T 3gi1_A 121 PHTWTDPVLAGEEAVNIAKELGRLDPKHKDSYTKNAKAFKKEAEQLTEEYTQKFKKVRSKTFVTQHT---------AFSY 191 (286)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEES---------CCHH
T ss_pred CceecCHHHHHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECC---------chHH
Confidence 4555555555444556666777777765543321 000 0 11112222344444322 222
Q ss_pred HHHHhCCCeEEEEEcc----cCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcEEEe-cCCC
Q 029271 74 TLSDFGVPYEIKILPP----HQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV-PLLS 140 (196)
Q Consensus 74 ~l~~~gi~~ev~V~Sa----HR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIgv-P~~~ 140 (196)
.++.||+.. +.+.+. =-+|.++.++++..+++++++|+.=...+..+.-.+|-.+..||+.+ |..+
T Consensus 192 f~~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~pl~~ 262 (286)
T 3gi1_A 192 LAKRFGLKQ-LGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSPLEA 262 (286)
T ss_dssp HHHHTTCEE-EEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECCCSCS
T ss_pred HHHHCCCeE-eeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEeccccc
Confidence 346899973 344432 34678999999999999999999999999999999999999999876 4433
No 189
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=59.65 E-value=37 Score=27.28 Aligned_cols=83 Identities=18% Similarity=0.056 Sum_probs=51.1
Q ss_pred eEEEEEcCCCC-----HHHHHHHHHHHHH-------hCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCch
Q 029271 54 IVGIIMESDLD-----LPVMNDAARTLSD-------FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 121 (196)
Q Consensus 54 ~V~IimGS~SD-----~~~~~~~~~~l~~-------~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L 121 (196)
+|+++.-.+.. .+..+.+...+++ .|.+.++.+..-.-.|+...+.++++.+++++.||...+.+..+
T Consensus 4 ~IG~~~p~~g~~~~~~~~~~~g~~~a~~~iN~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~ 83 (346)
T 1usg_A 4 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQ 83 (346)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEECCSSHHHHH
T ss_pred EEEEEeCCCCcchhcCHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEcCCCcHHHH
Confidence 57777654322 1334455555666 57777888887777888888888877777888777543322222
Q ss_pred hH-hhhhccCCcEEEe
Q 029271 122 SG-VAAANSQILVIRV 136 (196)
Q Consensus 122 ~g-vvA~~t~~PVIgv 136 (196)
+- -++....+|+|..
T Consensus 84 ~~~~~~~~~~ip~v~~ 99 (346)
T 1usg_A 84 PASDIYEDEGILMISP 99 (346)
T ss_dssp HHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHCCCeEEee
Confidence 21 1234457898864
No 190
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=59.39 E-value=23 Score=32.48 Aligned_cols=59 Identities=17% Similarity=0.142 Sum_probs=47.1
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE--cccC-CchHHHHHHHHHhhCCCeEEE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL--PPHQ-NCKEALSYALSAKERGIKIII 112 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~--SaHR-~p~~~~~~~~~~e~~~~~V~I 112 (196)
.+.-|..+.||...++++.+.+++.|..++..++ ...| +++.+.++++++++-|++.|.
T Consensus 115 d~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~ 176 (464)
T 2nx9_A 115 DVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIA 176 (464)
T ss_dssp CEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 4555668999999999999999999998776662 2333 789999999999999997543
No 191
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=58.94 E-value=23 Score=29.43 Aligned_cols=81 Identities=20% Similarity=0.190 Sum_probs=43.8
Q ss_pred CeEEEEEcCC--CCHHHHHHHHHHHHHhCCCeEEEEEcccC-----CchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh
Q 029271 53 PIVGIIMESD--LDLPVMNDAARTLSDFGVPYEIKILPPHQ-----NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 53 ~~V~IimGS~--SD~~~~~~~~~~l~~~gi~~ev~V~SaHR-----~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv 125 (196)
.+++|+.-.. .-....+++.+.|++.|+.+.+.-..+.. .+.. ..+...++++++|++ |+.+.+-.++
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~vi~~-GGDGT~l~a~ 80 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTG----TLAEIGQQADLAVVV-GGDGNMLGAA 80 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEE----CHHHHHHHCSEEEEC-SCHHHHHHHH
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhccccccccc----chhhcccCCCEEEEE-cCcHHHHHHH
Confidence 4677776432 23456888999999999865443211100 0000 011112346777664 5566666666
Q ss_pred hhc--cCCcEEEecC
Q 029271 126 AAN--SQILVIRVPL 138 (196)
Q Consensus 126 A~~--t~~PVIgvP~ 138 (196)
.+. ...|++|+|.
T Consensus 81 ~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 81 RTLARYDINVIGINR 95 (292)
T ss_dssp HHHTTSSCEEEEBCS
T ss_pred HHhhcCCCCEEEEEC
Confidence 543 4789999984
No 192
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=58.94 E-value=36 Score=29.60 Aligned_cols=79 Identities=15% Similarity=0.042 Sum_probs=54.2
Q ss_pred eEEEEEcCCC----CHHHHHHHHHHHHHhCCCeEEEEEcccC----------CchHHHHHHHHHhhCCCeEEEEecCCCC
Q 029271 54 IVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ----------NCKEALSYALSAKERGIKIIIVGDGVEA 119 (196)
Q Consensus 54 ~V~IimGS~S----D~~~~~~~~~~l~~~gi~~ev~V~SaHR----------~p~~~~~~~~~~e~~~~~V~IavAG~sa 119 (196)
+|+||+=|.. |.+..+.+.+.|+++|..+.+. .|- .-++..++.+.+.+..++.|+++-|+.+
T Consensus 15 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~---~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g 91 (336)
T 3sr3_A 15 TIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEG---SLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMN 91 (336)
T ss_dssp EEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEEC---TTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCSC
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEc---ccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccccc
Confidence 7999986543 5678899999999999865542 221 1246777877777778899999999855
Q ss_pred c--hhHh-----hhhccCCcEEEe
Q 029271 120 H--LSGV-----AAANSQILVIRV 136 (196)
Q Consensus 120 ~--L~gv-----vA~~t~~PVIgv 136 (196)
. |=.- +. ..+++.+|.
T Consensus 92 ~~rlL~~lD~~~i~-~~PK~~~Gy 114 (336)
T 3sr3_A 92 SNSLLPYIDYDAFQ-NNPKIMIGY 114 (336)
T ss_dssp GGGGGGGSCHHHHH-HSCCEEEEC
T ss_pred HHHHhhhcChhHHh-hCCeEEEEe
Confidence 4 2222 22 246677764
No 193
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=58.83 E-value=72 Score=29.44 Aligned_cols=85 Identities=11% Similarity=-0.000 Sum_probs=56.5
Q ss_pred CeEEEEEcCCCC---------HHHHHHHHHHHHHhC-CCeEEEEEcccCCchHHHHHHHHH-hhCCCeEEEEecCC-C-C
Q 029271 53 PIVGIIMESDLD---------LPVMNDAARTLSDFG-VPYEIKILPPHQNCKEALSYALSA-KERGIKIIIVGDGV-E-A 119 (196)
Q Consensus 53 ~~V~IimGS~SD---------~~~~~~~~~~l~~~g-i~~ev~V~SaHR~p~~~~~~~~~~-e~~~~~V~IavAG~-s-a 119 (196)
..+=.++||.-= .++++++.+.|+..| +|+++---..=.++++..++.+++ ....++.+|..-.. + +
T Consensus 7 ~~~~~~~gsq~lyg~~~~~~v~~~~~~~~~~l~~~~~l~~~vv~~g~v~t~~~~~~~~~~~n~~~~vdgvi~~~~TFs~a 86 (500)
T 4f2d_A 7 YEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPA 86 (500)
T ss_dssp CEEEEEEBCCSSSCTTHHHHHHHHHHHHHHHHHHHTCCSSEEEECCCBCSHHHHHHHHHHHHHCTTEEEEEEECCSCCCT
T ss_pred ceEEEEeccccccCHHHHHHHHHHHHHHHHHhccccCCCeEEEecCcCCCHHHHHHHHHHhccccCCcEEEEeCCcCccH
Confidence 357777787432 245566666677654 689998888999999999999999 56678766655433 2 2
Q ss_pred chhHhhhhccCCcEEEec
Q 029271 120 HLSGVAAANSQILVIRVP 137 (196)
Q Consensus 120 ~L~gvvA~~t~~PVIgvP 137 (196)
..---+......||+-.=
T Consensus 87 ~~~i~~l~~l~~PvL~~~ 104 (500)
T 4f2d_A 87 KMWINGLTMLNKPLLQFH 104 (500)
T ss_dssp HHHHHHHHHCCSCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 121122345689999853
No 194
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=58.81 E-value=54 Score=25.80 Aligned_cols=14 Identities=14% Similarity=0.275 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHhCC
Q 029271 67 VMNDAARTLSDFGV 80 (196)
Q Consensus 67 ~~~~~~~~l~~~gi 80 (196)
..+.+......+|.
T Consensus 170 al~~a~~la~~~~a 183 (268)
T 3ab8_A 170 ALHALAPLARALGL 183 (268)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHhhhcCCC
Confidence 33333333344444
No 195
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=58.61 E-value=70 Score=25.90 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=42.1
Q ss_pred hCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHh-hhhccCCcEEE
Q 029271 78 FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV-AAANSQILVIR 135 (196)
Q Consensus 78 ~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gv-vA~~t~~PVIg 135 (196)
.|.++++.+..-...|+...+.++++..++++.||...+.+...+-. ++.....|+|.
T Consensus 40 ~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~ 98 (356)
T 3ipc_A 40 NGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHANSGVSIPASEVYAENGILEIT 98 (356)
T ss_dssp TTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHHHHHCCCcEEEcCCCcHHHHHHHHHHHhCCCeEEe
Confidence 36779999999899999999988888778888888755443333221 33456789886
No 196
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=58.55 E-value=47 Score=26.86 Aligned_cols=67 Identities=10% Similarity=0.046 Sum_probs=42.1
Q ss_pred HHHHHHHHhCCC-eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh--------hhccCCcEEEecCCC
Q 029271 70 DAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--------AANSQILVIRVPLLS 140 (196)
Q Consensus 70 ~~~~~l~~~gi~-~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv--------A~~t~~PVIgvP~~~ 140 (196)
...+.++++|++ .+..+.. -.| ...+.+.++..+++.+|.++-.-+++..++ .-+++.||+-+|+.+
T Consensus 232 ~l~~~~~~~~~~~~~~~v~~--g~~--~~~I~~~a~~~~~dLiV~G~~g~~~~~~~~~Gsv~~~vl~~~~~pVLvv~~~~ 307 (319)
T 3olq_A 232 AMKELRQKFSIPEEKTHVKE--GLP--EQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTAEQLIDHIKCDLLAIKPDG 307 (319)
T ss_dssp HHHHHHHHTTCCGGGEEEEE--SCH--HHHHHHHHHHTTEEEEEEECCSCCSTHHHHHHHHHHHHHTTCCSEEEEECCTT
T ss_pred HHHHHHHHhCCCcccEEEec--CCc--HHHHHHHHHHhCCCEEEEeccCccCCccccccHHHHHHHhhCCCCEEEECCCC
Confidence 344455788885 3344442 223 455666666778898888885445554433 236789999999865
No 197
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=58.52 E-value=26 Score=27.04 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=47.4
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCC
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 117 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~ 117 (196)
.|.|+.=++...++++++...|...|+.+|+-.. |+-+.+-+-+++++..++..+|.+.-.
T Consensus 10 Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~---r~~e~Lg~kIR~a~~~kvPy~lVVG~k 70 (130)
T 1v95_A 10 DCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFL---NTEVSLSQALEDVSRGGSPFAIVITQQ 70 (130)
T ss_dssp TEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEEC---TTSSCHHHHHHHHHHHTCSEEEEECHH
T ss_pred eEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecC---CCCCcHHHHHHHHHHcCCCEEEEEech
Confidence 5778777889999999999999999998887321 224777777788888888766666443
No 198
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=58.51 E-value=11 Score=31.48 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=47.9
Q ss_pred CCeEEEEEcCCCCH-----HHHHHHHHHHHHhCCCeEEEEEcccCC-chHHHHHHHHHhhCCCe-EEEEecCC---CCch
Q 029271 52 APIVGIIMESDLDL-----PVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIK-IIIVGDGV---EAHL 121 (196)
Q Consensus 52 ~~~V~IimGS~SD~-----~~~~~~~~~l~~~gi~~ev~V~SaHR~-p~~~~~~~~~~e~~~~~-V~IavAG~---sa~L 121 (196)
..+|+|++|+.|+. ..++.+.+.|++.|+.+ ........ .+. .+...++ ||++.-|. .+.+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v--~~i~~~~~~~~~-------l~~~~~D~v~~~~hg~~ge~~~~ 83 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDA--HPFDPAERPLSA-------LKDEGFVRAFNALHGGYGENGQI 83 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEE--EEECTTTSCTTH-------HHHTTCCEEEECCCSGGGTSSHH
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEE--EEEeCCCchHHH-------hhhcCCCEEEEcCCCCCCchHHH
Confidence 45899999999983 45788888999999753 33332222 111 1234465 55555443 3445
Q ss_pred hHhhhhccCCcEEEecCCC
Q 029271 122 SGVAAANSQILVIRVPLLS 140 (196)
Q Consensus 122 ~gvvA~~t~~PVIgvP~~~ 140 (196)
.+++- ...+|++|+++.+
T Consensus 84 ~~~le-~~gip~~g~~~~~ 101 (317)
T 4eg0_A 84 QGALD-FYGIRYTGSGVLG 101 (317)
T ss_dssp HHHHH-HHTCEESSCCHHH
T ss_pred HHHHH-HcCCCeeCcCHHH
Confidence 55543 3468888877654
No 199
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=58.49 E-value=34 Score=23.60 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=25.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL 87 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~ 87 (196)
.+.|.+.+.+ .=|+|++++..|+++|++|+..=.
T Consensus 21 ~~~v~ly~~~--~Cp~C~~ak~~L~~~~i~y~~vdI 54 (103)
T 3nzn_A 21 RGKVIMYGLS--TCVWCKKTKKLLTDLGVDFDYVYV 54 (103)
T ss_dssp CSCEEEEECS--SCHHHHHHHHHHHHHTBCEEEEEG
T ss_pred CCeEEEEcCC--CCchHHHHHHHHHHcCCCcEEEEe
Confidence 3466666544 449999999999999999986433
No 200
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=58.32 E-value=27 Score=28.91 Aligned_cols=60 Identities=20% Similarity=0.157 Sum_probs=44.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh-------------------CCCeEEE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-------------------RGIKIII 112 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~-------------------~~~~V~I 112 (196)
..+.++|+|. + .....+...|.+.| ++.+ .+|++++..++.+++.. .+++++|
T Consensus 127 ~~k~vlV~Ga-G--giG~aia~~L~~~G---~V~v--~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilV 198 (287)
T 1nvt_A 127 KDKNIVIYGA-G--GAARAVAFELAKDN---NIII--ANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIII 198 (287)
T ss_dssp CSCEEEEECC-S--HHHHHHHHHHTSSS---EEEE--ECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEE
T ss_pred CCCEEEEECc-h--HHHHHHHHHHHHCC---CEEE--EECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEE
Confidence 3567888887 3 88999999999888 5554 57999988888766532 2458999
Q ss_pred EecCCCC
Q 029271 113 VGDGVEA 119 (196)
Q Consensus 113 avAG~sa 119 (196)
..+|...
T Consensus 199 n~ag~~~ 205 (287)
T 1nvt_A 199 NATPIGM 205 (287)
T ss_dssp ECSCTTC
T ss_pred ECCCCCC
Confidence 9888643
No 201
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=58.10 E-value=64 Score=25.07 Aligned_cols=78 Identities=9% Similarity=0.032 Sum_probs=47.7
Q ss_pred CCeEEEEEcCCC-----CHHHHHHHHHHHHHhCCCeEE-EEEcccCCchHHHHHHHHHhhC-CCeEEEEecCCCC----c
Q 029271 52 APIVGIIMESDL-----DLPVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEA----H 120 (196)
Q Consensus 52 ~~~V~IimGS~S-----D~~~~~~~~~~l~~~gi~~ev-~V~SaHR~p~~~~~~~~~~e~~-~~~V~IavAG~sa----~ 120 (196)
.++|+||+=|+. |.. ..-++..|+++|+...- .+. --.++.+.+-++++.++ +++++|+-.|.+- .
T Consensus 10 ~~~v~Ii~tGdE~g~i~D~n-~~~l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~ 86 (172)
T 1mkz_A 10 PTRIAILTVSNRRGEEDDTS-GHYLRDSAQEAGHHVVDKAIV--KENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQ 86 (172)
T ss_dssp CCEEEEEEECSSCCGGGCHH-HHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCC
T ss_pred CCEEEEEEEeCCCCcccCcc-HHHHHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCC
Confidence 468888874432 332 23467788999986432 332 34556666666666555 5899999887754 3
Q ss_pred hhHhhhhccCCc
Q 029271 121 LSGVAAANSQIL 132 (196)
Q Consensus 121 L~gvvA~~t~~P 132 (196)
.+-+++.....+
T Consensus 87 t~ea~~~~~~~~ 98 (172)
T 1mkz_A 87 APEALLPLFDRE 98 (172)
T ss_dssp HHHHHGGGCSEE
T ss_pred HHHHHHHHhccc
Confidence 555665544433
No 202
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=57.89 E-value=43 Score=26.86 Aligned_cols=122 Identities=13% Similarity=0.106 Sum_probs=74.1
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCC---e-EEEEEcccCCchHHHHHHHHHh--hCCCeEEEEec----CCCC
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVP---Y-EIKILPPHQNCKEALSYALSAK--ERGIKIIIVGD----GVEA 119 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~---~-ev~V~SaHR~p~~~~~~~~~~e--~~~~~V~IavA----G~sa 119 (196)
.+++||.+.-.+. .-.+.+.+.|++.|+. + .++|-++.-.|-...++++... +..++.+||.. |-.-
T Consensus 17 ~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaLG~VIrG~T~ 96 (168)
T 1ejb_A 17 IRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPIGVLIKGSTM 96 (168)
T ss_dssp CCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCSSS
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEecccccCCch
Confidence 5899999999888 7788899999999985 3 3578888888877777765332 44578777643 5454
Q ss_pred chhHhh----------hhccCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 120 HLSGVA----------AANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 120 ~L~gvv----------A~~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
|-=-|. +-.+..|||..=....+ .+ -+.-.....| .-.-+.+..||..|.+++.+
T Consensus 97 Hfd~Va~~vs~Gl~~vsL~~~vPV~~GVLT~~~---~eQA~~Rag~~~~----~~~~nkG~eaA~aAlem~~l 162 (168)
T 1ejb_A 97 HFEYISDSTTHALMNLQEKVDMPVIFGLLTCMT---EEQALARAGIDEA----HSMHNHGEDWGAAAVEMAVK 162 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCBCCEEEEESS---HHHHHHHBTCSTT----CCSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCEEEEEecCCC---HHHHHHhcCcccc----ccccchHHHHHHHHHHHHHH
Confidence 433221 12366777665221110 11 1111110010 00126688999999988754
No 203
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=57.57 E-value=41 Score=26.96 Aligned_cols=26 Identities=23% Similarity=0.153 Sum_probs=15.8
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++-+ ...+++.|.+-|.
T Consensus 11 ~k~vlVTGas~gI--G~aia~~l~~~G~ 36 (264)
T 3ucx_A 11 DKVVVISGVGPAL--GTTLARRCAEQGA 36 (264)
T ss_dssp TCEEEEESCCTTH--HHHHHHHHHHTTC
T ss_pred CcEEEEECCCcHH--HHHHHHHHHHCcC
Confidence 4677788877743 4455555555554
No 204
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=57.53 E-value=46 Score=27.04 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=53.1
Q ss_pred CeEEEEEcCCCC-----HHHHHHHHHHHHHh-------CCCeEEEEEcccCCchHHHHHHHHHh-hCCCeEEEEecCCCC
Q 029271 53 PIVGIIMESDLD-----LPVMNDAARTLSDF-------GVPYEIKILPPHQNCKEALSYALSAK-ERGIKIIIVGDGVEA 119 (196)
Q Consensus 53 ~~V~IimGS~SD-----~~~~~~~~~~l~~~-------gi~~ev~V~SaHR~p~~~~~~~~~~e-~~~~~V~IavAG~sa 119 (196)
-+|+++.-.+.. .+..+-+...+++. |.++++.+..-...|++..+.++++. .++++.||...+.+.
T Consensus 5 i~IG~i~p~sg~~~~~~~~~~~g~~~a~~~~n~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~ 84 (358)
T 3hut_A 5 LLLGYELPLTGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFSSTV 84 (358)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHCTTEEEEEECSSHHH
T ss_pred EEEEEEeccCCchhhcCHHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCCCCHHHHHHHHHHHhccCCcEEEEcCCCcHH
Confidence 368888765433 23334444455554 56799999999999999888888886 667777775433322
Q ss_pred chhH-hhhhccCCcEEEe
Q 029271 120 HLSG-VAAANSQILVIRV 136 (196)
Q Consensus 120 ~L~g-vvA~~t~~PVIgv 136 (196)
..+- -++.....|+|..
T Consensus 85 ~~~~~~~~~~~~iP~v~~ 102 (358)
T 3hut_A 85 SMAAGSIYGKEGMPQLSP 102 (358)
T ss_dssp HHHHHHHHHHHTCCEEES
T ss_pred HHHHHHHHHHCCCcEEec
Confidence 2221 1234567899964
No 205
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=57.42 E-value=52 Score=27.05 Aligned_cols=27 Identities=7% Similarity=0.037 Sum_probs=18.7
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+++ .+...+.+.|-+-|.
T Consensus 30 ~gk~vlVTGas~--gIG~~la~~l~~~G~ 56 (301)
T 3tjr_A 30 DGRAAVVTGGAS--GIGLATATEFARRGA 56 (301)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 457888888887 455666666666664
No 206
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=57.34 E-value=25 Score=30.63 Aligned_cols=78 Identities=13% Similarity=0.195 Sum_probs=45.3
Q ss_pred eEEEEEcCCCCHHHHHHHHH-HHHHhCCC---eEEEEEcccCCc-h----HHHHHHHHHhhCCCeEEEEecCCCCchhHh
Q 029271 54 IVGIIMESDLDLPVMNDAAR-TLSDFGVP---YEIKILPPHQNC-K----EALSYALSAKERGIKIIIVGDGVEAHLSGV 124 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~-~l~~~gi~---~ev~V~SaHR~p-~----~~~~~~~~~e~~~~~V~IavAG~sa~L~gv 124 (196)
.+.|+||..-|. ...+ .++.|||+ |++.+.|- +. + -+.++.+-++....+++++..+....++..
T Consensus 38 ~~~~~tgqh~~~----~~~~~~~~~~~i~~~~~~l~~~~~--~~~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aal 111 (385)
T 4hwg_A 38 HILVHTGQNYAY----ELNQVFFDDMGIRKPDYFLEVAAD--NTAKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAI 111 (385)
T ss_dssp EEEEECSCHHHH----HHTHHHHC-CCCCCCSEECCCCCC--CSHHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHH
T ss_pred EEEEEeCCCCCh----hHHHHHHhhCCCCCCceecCCCCC--CHHHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHH
Confidence 467777764221 2333 34678873 45544332 22 2 222233334445678999998888888855
Q ss_pred hhhccCCcEEEec
Q 029271 125 AAANSQILVIRVP 137 (196)
Q Consensus 125 vA~~t~~PVIgvP 137 (196)
.|.....||+.+=
T Consensus 112 aA~~~~IPv~h~e 124 (385)
T 4hwg_A 112 AAKRRKIPIFHME 124 (385)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHHhCCCEEEEe
Confidence 5667889998873
No 207
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=56.99 E-value=40 Score=27.86 Aligned_cols=80 Identities=18% Similarity=0.157 Sum_probs=45.6
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhC-CCeEEEEEcccCCchH-------------HHHHHHHHhhCCCe-EEEEecCCC
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFG-VPYEIKILPPHQNCKE-------------ALSYALSAKERGIK-IIIVGDGVE 118 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~g-i~~ev~V~SaHR~p~~-------------~~~~~~~~e~~~~~-V~IavAG~s 118 (196)
++.||-=.+| ...-+.+.+.++.+- =..++...++-..|.. +.+.+++.+..|++ ++|++- .+
T Consensus 3 rilvINPnts-~~~T~~i~~~~~~~~~p~~~i~~~t~~~gp~~i~~~~d~~~a~~~l~~~~~~l~~~g~d~iviaCn-t~ 80 (245)
T 3qvl_A 3 RIQVINPNTS-LAMTETIGAAARAVAAPGTEILAVCPRAGVPSIEGHFDEAIAAVGVLEQIRAGREQGVDGHVIASF-GD 80 (245)
T ss_dssp EEEEECSSCC-HHHHHHHHHHHHHHCCTTEEEEEECCSSSCSSCCSHHHHHHHHHHHHHHHHHHHHHTCSEEEEC-C-CC
T ss_pred EEEEEeCCCC-HHHHHHHHHHHHHhcCCCCEEEEEeCCCCchhhcChhHHHHHHHHHHHHHHHHHHCCCCEEEEeCC-Ch
Confidence 3455544333 223344445555432 2467777777666642 23444556777897 555554 44
Q ss_pred CchhHhhhhccCCcEEEe
Q 029271 119 AHLSGVAAANSQILVIRV 136 (196)
Q Consensus 119 a~L~gvvA~~t~~PVIgv 136 (196)
.+| ..+-...+.||||+
T Consensus 81 ~~l-~~lr~~~~iPvigi 97 (245)
T 3qvl_A 81 PGL-LAARELAQGPVIGI 97 (245)
T ss_dssp TTH-HHHHHHCSSCEEEH
T ss_pred hHH-HHHHHHcCCCEECc
Confidence 567 56767789999997
No 208
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=56.93 E-value=36 Score=28.50 Aligned_cols=123 Identities=14% Similarity=0.208 Sum_probs=63.8
Q ss_pred CCeEEEEEcCC----CCHHHHHHHHHHHHHhCCCeEEEEEcccCCch---------------HHHHHHHHHhhCCCeEEE
Q 029271 52 APIVGIIMESD----LDLPVMNDAARTLSDFGVPYEIKILPPHQNCK---------------EALSYALSAKERGIKIII 112 (196)
Q Consensus 52 ~~~V~IimGS~----SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~---------------~~~~~~~~~e~~~~~V~I 112 (196)
.+.|.|.+||. ...+...++.+.|+.+++ ++-+..-....+ ...+++. .+++||
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~--~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll~-----~ad~~v 304 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA--DFVLALGDLDISPLGTLPRNVRAVGWTPLHTLLR-----TCTAVV 304 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS--EEEEECTTSCCGGGCSCCTTEEEESSCCHHHHHT-----TCSEEE
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC--EEEEEECCcChhhhccCCCcEEEEccCCHHHHHh-----hCCEEE
Confidence 34555555665 255677888888887754 333332111111 1222322 278999
Q ss_pred EecCCCCchhHhhh-hccCCcEEEecCCCCCCChh--hhhhhhcCCCCCeeeEEecCC-hhhHHHHHHHHHccCCHHHHH
Q 029271 113 VGDGVEAHLSGVAA-ANSQILVIRVPLLSEDWSED--DVINSIRMPSHVQVASVPRNN-AKNAALYAVKVLGIADEDLLE 188 (196)
Q Consensus 113 avAG~sa~L~gvvA-~~t~~PVIgvP~~~~~~~G~--DLlS~lqmPsGvpvatV~I~~-~~nAA~~AaqILa~~d~~l~~ 188 (196)
.=+|.. ++.- -..-+|+|.+|.......-- +.+. + .|.+. + +.. ..++..++ ++| .|+..++
T Consensus 305 ~~~G~~----t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~--~--~g~g~--~-~~~~~~~~~~l~-~ll--~~~~~~~ 370 (398)
T 3oti_A 305 HHGGGG----TVMTAIDAGIPQLLAPDPRDQFQHTAREAVS--R--RGIGL--V-STSDKVDADLLR-RLI--GDESLRT 370 (398)
T ss_dssp ECCCHH----HHHHHHHHTCCEEECCCTTCCSSCTTHHHHH--H--HTSEE--E-CCGGGCCHHHHH-HHH--HCHHHHH
T ss_pred ECCCHH----HHHHHHHhCCCEEEcCCCchhHHHHHHHHHH--H--CCCEE--e-eCCCCCCHHHHH-HHH--cCHHHHH
Confidence 755542 2332 23678999999854322222 3221 1 34432 2 232 22455455 666 4788888
Q ss_pred HHHHHHh
Q 029271 189 RIRKYVE 195 (196)
Q Consensus 189 kl~~~r~ 195 (196)
+++..++
T Consensus 371 ~~~~~~~ 377 (398)
T 3oti_A 371 AAREVRE 377 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766543
No 209
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=56.75 E-value=32 Score=28.62 Aligned_cols=126 Identities=10% Similarity=0.105 Sum_probs=63.8
Q ss_pred CCCeEEEEEcCC--CCHHHHHHHHHHHHHhCCCeEEEEEcccCC--------ch--------HHHHHHHHHhhCCCeEEE
Q 029271 51 DAPIVGIIMESD--LDLPVMNDAARTLSDFGVPYEIKILPPHQN--------CK--------EALSYALSAKERGIKIII 112 (196)
Q Consensus 51 ~~~~V~IimGS~--SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~--------p~--------~~~~~~~~~e~~~~~V~I 112 (196)
+.+.|.+..||. .......++.+.|+..++.+ -+..-... ++ .+.+++ .. +++||
T Consensus 241 ~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~--~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l---~~--ad~~v 313 (412)
T 3otg_A 241 ARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADV--LVASGPSLDVSGLGEVPANVRLESWVPQAALL---PH--VDLVV 313 (412)
T ss_dssp TSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEE--EEECCSSCCCTTCCCCCTTEEEESCCCHHHHG---GG--CSEEE
T ss_pred CCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEE--EEEECCCCChhhhccCCCcEEEeCCCCHHHHH---hc--CcEEE
Confidence 345566666776 56778888888888775533 22211111 11 122222 22 68998
Q ss_pred EecCCCCchhHhhhhccCCcEEEecCCCCCCChh-hhhhhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHHHH
Q 029271 113 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSED-DVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLER 189 (196)
Q Consensus 113 avAG~sa~L~gvvA~~t~~PVIgvP~~~~~~~G~-DLlS~lqmPsGvpvatV~I~-~~~nAA~~AaqILa~-~d~~l~~k 189 (196)
.-+|... -.=|...-+|||.+|... +..+. +.+.- .|.+ .+ +. +..++..++..|..+ .|+..+++
T Consensus 314 ~~~g~~t---~~Ea~a~G~P~v~~p~~~-~q~~~~~~v~~----~g~g--~~-~~~~~~~~~~l~~ai~~ll~~~~~~~~ 382 (412)
T 3otg_A 314 HHGGSGT---TLGALGAGVPQLSFPWAG-DSFANAQAVAQ----AGAG--DH-LLPDNISPDSVSGAAKRLLAEESYRAG 382 (412)
T ss_dssp ESCCHHH---HHHHHHHTCCEEECCCST-THHHHHHHHHH----HTSE--EE-CCGGGCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCchHH---HHHHHHhCCCEEecCCch-hHHHHHHHHHH----cCCE--Ee-cCcccCCHHHHHHHHHHHHhCHHHHHH
Confidence 7665321 122334678999998763 22222 12221 2332 22 12 112444444444433 57888887
Q ss_pred HHHHH
Q 029271 190 IRKYV 194 (196)
Q Consensus 190 l~~~r 194 (196)
+...+
T Consensus 383 ~~~~~ 387 (412)
T 3otg_A 383 ARAVA 387 (412)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 210
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=56.69 E-value=43 Score=33.29 Aligned_cols=123 Identities=10% Similarity=0.078 Sum_probs=69.8
Q ss_pred CeEEEEEcCCCCHHH-HHHHHHHHHHhCCCeEEEEEcccCC----ch----------HHHHHHHHHhhCCCeEEEEecCC
Q 029271 53 PIVGIIMESDLDLPV-MNDAARTLSDFGVPYEIKILPPHQN----CK----------EALSYALSAKERGIKIIIVGDGV 117 (196)
Q Consensus 53 ~~V~IimGS~SD~~~-~~~~~~~l~~~gi~~ev~V~SaHR~----p~----------~~~~~~~~~e~~~~~V~IavAG~ 117 (196)
+.|.|+..+ |-.-. +-+|++.|++-|| .+||.|.|-. |. ++..++. ....++++..|.
T Consensus 660 ~DVvLiAtG-sev~~EAL~AA~~L~~~GI--~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T----~e~h~i~~~gGl 732 (845)
T 3ahc_A 660 VQVVLASAG-DVPTQELMAASDALNKMGI--KFKVVNVVDLLKLQSRENNDEALTDEEFTELFT----ADKPVLFAYHSY 732 (845)
T ss_dssp CSEEEEEES-HHHHHHHHHHHHHHHHTTC--CEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHC----SSSCEEEEESSC
T ss_pred CCEEEEEec-cHHHHHHHHHHHHHHhCCC--CEEEEEeCCCCccCCccccccccCHHHhCcEee----cCCcceeeecCc
Confidence 555555433 22233 6788999998888 5788888743 21 1222221 122588888888
Q ss_pred CCchhHhhhhc-c--CCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHc-cCCHHHHHHHHHH
Q 029271 118 EAHLSGVAAAN-S--QILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLG-IADEDLLERIRKY 193 (196)
Q Consensus 118 sa~L~gvvA~~-t--~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa-~~d~~l~~kl~~~ 193 (196)
...+..+++.. . .+=|+|+|-.+....-.||+-.-. .+.++-+..|.+.+. .....+.++++..
T Consensus 733 gsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~g------------ld~~~Iv~~a~~~l~~~~~~~~~~~~~~~ 800 (845)
T 3ahc_A 733 AQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVND------------MDRYALQAAALKLIDADKYADKIDELNAF 800 (845)
T ss_dssp HHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTTT------------CSHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHhC------------cCHHHHHHHHHHHcchhhHHHHHHHHHHH
Confidence 88888888776 2 233888887543333344554432 244444444444443 3334566666554
Q ss_pred H
Q 029271 194 V 194 (196)
Q Consensus 194 r 194 (196)
+
T Consensus 801 ~ 801 (845)
T 3ahc_A 801 R 801 (845)
T ss_dssp H
T ss_pred H
Confidence 4
No 211
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=56.11 E-value=26 Score=28.33 Aligned_cols=49 Identities=10% Similarity=0.076 Sum_probs=32.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHh
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK 104 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e 104 (196)
+.|+++|+|..|..-+...+++.|.+-|.. +-+ ..|..+.+.+..+..+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~--Vvi--~~r~~~~~~~~~~~~~ 53 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAK--LVF--TYRKERSRKELEKLLE 53 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCE--EEE--EESSGGGHHHHHHHHG
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCE--EEE--EECCHHHHHHHHHHHH
Confidence 468999999877777888888888888863 222 2344444444444433
No 212
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=55.98 E-value=24 Score=29.18 Aligned_cols=126 Identities=15% Similarity=0.163 Sum_probs=62.3
Q ss_pred CCeEEEEEcCCCC--HHHHHHHHHHHHHhCCCeEEEEEcccC-CchHH---------------HHHHHHHhhCCCeEEEE
Q 029271 52 APIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQ-NCKEA---------------LSYALSAKERGIKIIIV 113 (196)
Q Consensus 52 ~~~V~IimGS~SD--~~~~~~~~~~l~~~gi~~ev~V~SaHR-~p~~~---------------~~~~~~~e~~~~~V~Ia 113 (196)
.+.|.|..||... .....++.+.|+.++ +.+-+..-.. ..+.+ .+++. .+++||+
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll~-----~ad~~v~ 303 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADTP--WHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVLA-----HARACLT 303 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTSS--CEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHHT-----TEEEEEE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcCC--cEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHHh-----hCCEEEE
Confidence 4567777777543 335666677776665 4444321111 11111 02222 2689998
Q ss_pred ecCCCCchhHhhhhccCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHHHHH
Q 029271 114 GDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLERI 190 (196)
Q Consensus 114 vAG~sa~L~gvvA~~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~-~~~nAA~~AaqILa~-~d~~l~~kl 190 (196)
-+|...-+ =+...-+|+|.+|....+..+.. .+. + .|.+ .+ +. +..++..++..|..+ .|+..++++
T Consensus 304 ~~G~~t~~---Ea~~~G~P~v~~p~~~~~q~~~a~~~~--~--~g~g--~~-~~~~~~~~~~l~~~~~~ll~~~~~~~~~ 373 (402)
T 3ia7_A 304 HGTTGAVL---EAFAAGVPLVLVPHFATEAAPSAERVI--E--LGLG--SV-LRPDQLEPASIREAVERLAADSAVRERV 373 (402)
T ss_dssp CCCHHHHH---HHHHTTCCEEECGGGCGGGHHHHHHHH--H--TTSE--EE-CCGGGCSHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCCHHHHH---HHHHhCCCEEEeCCCcccHHHHHHHHH--H--cCCE--EE-ccCCCCCHHHHHHHHHHHHcCHHHHHHH
Confidence 77642222 22336689999987322222222 222 2 4543 22 22 112444444444433 578888887
Q ss_pred HHHH
Q 029271 191 RKYV 194 (196)
Q Consensus 191 ~~~r 194 (196)
+..+
T Consensus 374 ~~~~ 377 (402)
T 3ia7_A 374 RRMQ 377 (402)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 213
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=55.80 E-value=60 Score=26.08 Aligned_cols=76 Identities=9% Similarity=0.033 Sum_probs=42.5
Q ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHhCCC-eEEEEEcccCCchHHHHHHHHHhhC-CCeEEEEecCCCCc----
Q 029271 53 PIVGIIMESDLDLP------VMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAH---- 120 (196)
Q Consensus 53 ~~V~IimGS~SD~~------~~~~~~~~l~~~gi~-~ev~V~SaHR~p~~~~~~~~~~e~~-~~~V~IavAG~sa~---- 120 (196)
++|+||+=|+.=.+ ...-+++.|+++|+. +..+..-.--.++.+.+-++++-++ +++++|+-.|.+-+
T Consensus 4 ~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g~~D~ 83 (195)
T 1di6_A 4 LRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDV 83 (195)
T ss_dssp EEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEESCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCC
T ss_pred CEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcc
Confidence 57888874433221 223467788999986 2222222223445555555555443 68999998887643
Q ss_pred hhHhhhhc
Q 029271 121 LSGVAAAN 128 (196)
Q Consensus 121 L~gvvA~~ 128 (196)
.+-+++..
T Consensus 84 T~ea~~~~ 91 (195)
T 1di6_A 84 TPDATLAV 91 (195)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 44444443
No 214
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=55.48 E-value=40 Score=29.10 Aligned_cols=51 Identities=14% Similarity=0.009 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCC
Q 029271 67 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 117 (196)
Q Consensus 67 ~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~ 117 (196)
..+-+..+.+++|++.-.+++.-.|+.+++.+++..+...|++=|.|+.|=
T Consensus 70 t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 70 THSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 344455566789999999999999999999999999999999777777774
No 215
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=55.32 E-value=29 Score=29.95 Aligned_cols=81 Identities=14% Similarity=0.110 Sum_probs=55.4
Q ss_pred eEEEEEcCC----CCHHHHHHHHHHHHHhCCCeEEEEEcccC-------C-chHHHHHHHHHhhCCCeEEEEecCCCCc-
Q 029271 54 IVGIIMESD----LDLPVMNDAARTLSDFGVPYEIKILPPHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEAH- 120 (196)
Q Consensus 54 ~V~IimGS~----SD~~~~~~~~~~l~~~gi~~ev~V~SaHR-------~-p~~~~~~~~~~e~~~~~V~IavAG~sa~- 120 (196)
+|+||+=|. .+-+..+.+.+.|+++|..+.+.=. +.+ + -+|..++.+.+.+..++.|+++-|+.+.
T Consensus 14 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~ 92 (327)
T 4h1h_A 14 EIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEH-VAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSN 92 (327)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTT-TTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCGG
T ss_pred EEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcc-hhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchhHH
Confidence 899997553 3667889999999999986544211 111 1 1477778777788788999999998664
Q ss_pred --hh----HhhhhccCCcEEEe
Q 029271 121 --LS----GVAAANSQILVIRV 136 (196)
Q Consensus 121 --L~----gvvA~~t~~PVIgv 136 (196)
|+ ..+. .-+++.+|.
T Consensus 93 rlL~~LD~~~i~-~~PK~~~Gy 113 (327)
T 4h1h_A 93 QLLPYLDYDLIS-ENPKILCGF 113 (327)
T ss_dssp GGGGGCCHHHHH-HSCCEEEEC
T ss_pred HHhhhcchhhhc-cCCeEEEec
Confidence 22 2443 346777774
No 216
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=54.85 E-value=40 Score=29.19 Aligned_cols=82 Identities=17% Similarity=0.099 Sum_probs=55.4
Q ss_pred eEEEEEcC-CCCHHHHHHHHHHHHHhCCCeEEEEEcccC--------CchHHHHHHHHHhhCCCeEEEEecCCCCch---
Q 029271 54 IVGIIMES-DLDLPVMNDAARTLSDFGVPYEIKILPPHQ--------NCKEALSYALSAKERGIKIIIVGDGVEAHL--- 121 (196)
Q Consensus 54 ~V~IimGS-~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR--------~p~~~~~~~~~~e~~~~~V~IavAG~sa~L--- 121 (196)
+|+||+=| .-|.+..+.+.+.|+++|....+. -.+.+ .-++..++.+.+.+..++.|+++-|+.+..
T Consensus 19 ~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~rlL 97 (311)
T 1zl0_A 19 RVALIAPASAIATDVLEATLRQLEVHGVDYHLG-RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQLL 97 (311)
T ss_dssp EEEEECCSBCCCHHHHHHHHHHHHHTTCCEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCGGGGT
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEC-ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCHHHHh
Confidence 69999844 347778899999999999876653 11221 224566677777777889999999986653
Q ss_pred h----HhhhhccCCcEEEe
Q 029271 122 S----GVAAANSQILVIRV 136 (196)
Q Consensus 122 ~----gvvA~~t~~PVIgv 136 (196)
+ ..+..-.+++.+|.
T Consensus 98 p~LD~~~i~~a~PK~~iGy 116 (311)
T 1zl0_A 98 PGLDWGRLQAASPRPLIGF 116 (311)
T ss_dssp TTCCHHHHHHSCCCCEEEC
T ss_pred hccchhhhhccCCCEEEEE
Confidence 3 23332156677763
No 217
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=54.76 E-value=48 Score=28.69 Aligned_cols=41 Identities=24% Similarity=0.441 Sum_probs=31.9
Q ss_pred HhCCCeEEEEEccc-----CCchHHHHHHHHHhhCCCeEEEEecCC
Q 029271 77 DFGVPYEIKILPPH-----QNCKEALSYALSAKERGIKIIIVGDGV 117 (196)
Q Consensus 77 ~~gi~~ev~V~SaH-----R~p~~~~~~~~~~e~~~~~V~IavAG~ 117 (196)
..+.+.-+|+..-. -+.++..++++.+++.|++.|-...|+
T Consensus 207 ~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~ 252 (340)
T 3gr7_A 207 VWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGA 252 (340)
T ss_dssp HCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCC
T ss_pred hcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 34788888988643 356888999999999999877776665
No 218
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=54.69 E-value=19 Score=27.04 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=50.2
Q ss_pred CeEEEEEcCCCCHHHH--HHHHHHHHHhCC-CeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh-c
Q 029271 53 PIVGIIMESDLDLPVM--NDAARTLSDFGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-N 128 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~--~~~~~~l~~~gi-~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~-~ 128 (196)
.+|.++||+--=-..+ +++++.|++.|+ +.++.-++....++ .+++||... .|...... .
T Consensus 14 kkIlvVC~sGmgTS~ml~~klkk~~~e~gi~~~~V~~~~i~e~~~------------~~DlIist~----~l~~~~~~~~ 77 (125)
T 1vkr_A 14 RKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNLPP------------DVDLVITHR----DLTERAMRQV 77 (125)
T ss_dssp CEEEECCSSSSHHHHHHHHHHHHHHHHTTCTTSEEEECCTTCCCT------------TCSEEEEEH----HHHHHHHHHC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHCCCceEEEEEeeHHHCCC------------CCCEEEECC----ccchhhhccC
Confidence 4799999876655555 799999999999 98888877766642 368888854 33332221 2
Q ss_pred cCCcEEEecCC
Q 029271 129 SQILVIRVPLL 139 (196)
Q Consensus 129 t~~PVIgvP~~ 139 (196)
...|||.+.+.
T Consensus 78 ~~ipVi~V~~~ 88 (125)
T 1vkr_A 78 PQAQHISLTNF 88 (125)
T ss_dssp TTSEEEEESCT
T ss_pred CCCCEEEEecC
Confidence 47899988765
No 219
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=54.66 E-value=85 Score=25.45 Aligned_cols=26 Identities=23% Similarity=0.190 Sum_probs=14.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+++.|.+-|.
T Consensus 29 ~k~~lVTGas~--GIG~aia~~la~~G~ 54 (280)
T 4da9_A 29 RPVAIVTGGRR--GIGLGIARALAASGF 54 (280)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEecCCC--HHHHHHHHHHHHCCC
Confidence 46677777665 344555555555554
No 220
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=54.64 E-value=40 Score=27.40 Aligned_cols=26 Identities=23% Similarity=0.284 Sum_probs=16.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
+++++|+|+++ .+...+++.|.+-|.
T Consensus 24 ~k~~lVTGas~--GIG~aia~~la~~G~ 49 (279)
T 3sju_A 24 PQTAFVTGVSS--GIGLAVARTLAARGI 49 (279)
T ss_dssp -CEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 46788888776 445556666666664
No 221
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=54.46 E-value=65 Score=26.69 Aligned_cols=84 Identities=14% Similarity=0.139 Sum_probs=52.7
Q ss_pred CCeEEEEEcCCCC-----HHHHHHHHHHHHHh-------CCCeEEEEEcccCCchHHHHHHHHHhh-CCCeEEEEecCCC
Q 029271 52 APIVGIIMESDLD-----LPVMNDAARTLSDF-------GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVE 118 (196)
Q Consensus 52 ~~~V~IimGS~SD-----~~~~~~~~~~l~~~-------gi~~ev~V~SaHR~p~~~~~~~~~~e~-~~~~V~IavAG~s 118 (196)
+.+|+++.-.+.. .+..+-+...+++. |.++++.+..-...|+...+.++++.. ++++.||...+..
T Consensus 7 ~~~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~N~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~ 86 (385)
T 1pea_A 7 RPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSH 86 (385)
T ss_dssp -CEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHTTTTBTTBCCEEEEECCTTCHHHHHHHHHHHHHTTCCCEEEECCSHH
T ss_pred CeEEEEEECCCCcchhcCHHHHHHHHHHHHHhccccCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhhCCcEEEECCCchH
Confidence 3478888754322 13344555556665 777788888777888888888887765 7788777654432
Q ss_pred Cch--hHhhhhccCCcEEEe
Q 029271 119 AHL--SGVAAANSQILVIRV 136 (196)
Q Consensus 119 a~L--~gvvA~~t~~PVIgv 136 (196)
... ..+ ......|+|.+
T Consensus 87 ~~~~~~~~-~~~~~iP~v~~ 105 (385)
T 1pea_A 87 TRKAVMPV-VERADALLCYP 105 (385)
T ss_dssp HHHHHHHH-HHHTTCEEEEC
T ss_pred HHHHHHHH-HHhcCceEEEC
Confidence 222 222 23457898864
No 222
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=54.34 E-value=4.1 Score=34.57 Aligned_cols=81 Identities=21% Similarity=0.145 Sum_probs=47.8
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE-cc-----cCCchHH----HHHHHHHhhCCCe-EEEEecCCCC-c
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-PP-----HQNCKEA----LSYALSAKERGIK-IIIVGDGVEA-H 120 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~-Sa-----HR~p~~~----~~~~~~~e~~~~~-V~IavAG~sa-~ 120 (196)
..|+|+=++-..+.+.+++.+.+-.-. -+.+. .+ -++.+++ .+.++.+++.|++ ++|++-..+. +
T Consensus 23 ~~IGvfDsG~Ggltv~~~i~~~~P~~~---~iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas~~~ 99 (286)
T 2jfq_A 23 KPIGVIDSGVGGLTVAKEIMRQLPNET---IYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVA 99 (286)
T ss_dssp SCEEEEESSSTTHHHHHHHHHHCTTCC---EEEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHH
T ss_pred CcEEEEeCCCCcHHHHHHHHHHCCCcc---EEEeccCCCCCcCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchhHHH
Confidence 469999444448889888887753221 11111 11 2444444 4455666777886 6666655554 3
Q ss_pred hhHhhhhccCCcEEEec
Q 029271 121 LSGVAAANSQILVIRVP 137 (196)
Q Consensus 121 L~gvvA~~t~~PVIgvP 137 (196)
+. -+...+..||||+.
T Consensus 100 l~-~lr~~~~iPVigi~ 115 (286)
T 2jfq_A 100 LE-YLQKTLSISVIGVI 115 (286)
T ss_dssp HH-HHHHHCSSEEEESH
T ss_pred HH-HHHHhCCCCEEecc
Confidence 44 44556789999954
No 223
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=54.25 E-value=94 Score=25.86 Aligned_cols=126 Identities=13% Similarity=0.130 Sum_probs=63.8
Q ss_pred CCeEEEEEcCC--CCHHHHHHHHHHHHHhCCCeEEEEE-cccCCchH---------------HHHHHHHHhhCCCeEEEE
Q 029271 52 APIVGIIMESD--LDLPVMNDAARTLSDFGVPYEIKIL-PPHQNCKE---------------ALSYALSAKERGIKIIIV 113 (196)
Q Consensus 52 ~~~V~IimGS~--SD~~~~~~~~~~l~~~gi~~ev~V~-SaHR~p~~---------------~~~~~~~~e~~~~~V~Ia 113 (196)
.+.|.|..||. .+....+++.+.|+.++ +.+-+. +-....+. ..+++.. +++||+
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~--~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll~~-----ad~~v~ 319 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQP--WHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQ-----ATVCVT 319 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTSS--CEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHHHH-----EEEEEE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcCC--cEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHHhh-----CCEEEE
Confidence 45676667774 24456777777777666 444442 21111111 1133332 689998
Q ss_pred ecCCCCchhHhhhhccCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHHHHH
Q 029271 114 GDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLERI 190 (196)
Q Consensus 114 vAG~sa~L~gvvA~~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~-~~~nAA~~AaqILa~-~d~~l~~kl 190 (196)
-+|...- .=+...-+|+|.+|... +..... .+. + .|+++ + +. +..++..++..|..+ .|+..++++
T Consensus 320 ~~G~~t~---~Ea~~~G~P~v~~p~~~-~q~~~a~~l~--~--~g~g~--~-~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 388 (415)
T 3rsc_A 320 HGGMGTL---MEALYWGRPLVVVPQSF-DVQPMARRVD--Q--LGLGA--V-LPGEKADGDTLLAAVGAVAADPALLARV 388 (415)
T ss_dssp SCCHHHH---HHHHHTTCCEEECCCSG-GGHHHHHHHH--H--HTCEE--E-CCGGGCCHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHH---HHHHHhCCCEEEeCCcc-hHHHHHHHHH--H--cCCEE--E-cccCCCCHHHHHHHHHHHHcCHHHHHHH
Confidence 7664222 22334678999998733 221111 222 2 34432 2 22 122444444444443 678888887
Q ss_pred HHHHh
Q 029271 191 RKYVE 195 (196)
Q Consensus 191 ~~~r~ 195 (196)
+..++
T Consensus 389 ~~~~~ 393 (415)
T 3rsc_A 389 EAMRG 393 (415)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 224
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=53.22 E-value=55 Score=26.73 Aligned_cols=45 Identities=18% Similarity=0.104 Sum_probs=26.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHH
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 102 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~ 102 (196)
.+++++|+|+.+- +...+++.|.+-|. .+.+ ..|..+.+.+..++
T Consensus 27 ~~k~~lVTGas~G--IG~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~ 71 (283)
T 3v8b_A 27 PSPVALITGAGSG--IGRATALALAADGV--TVGA--LGRTRTEVEEVADE 71 (283)
T ss_dssp CCCEEEEESCSSH--HHHHHHHHHHHTTC--EEEE--EESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCH--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHH
Confidence 3578899998874 45666777766675 2222 23555544444433
No 225
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=53.08 E-value=78 Score=26.09 Aligned_cols=84 Identities=15% Similarity=0.148 Sum_probs=49.0
Q ss_pred CeEEEEEcCCCC----HHHHHHHHHHHHHhCCCeEEEEEcccCCc---------hHHHHHHHHHhhCCCe-EEEEecCCC
Q 029271 53 PIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNC---------KEALSYALSAKERGIK-IIIVGDGVE 118 (196)
Q Consensus 53 ~~V~IimGS~SD----~~~~~~~~~~l~~~gi~~ev~V~SaHR~p---------~~~~~~~~~~e~~~~~-V~IavAG~s 118 (196)
.+|.||.||..- ...++.+.+.+++-|+ ++.+......| +.+.++.+.... ++ +||+.-=-.
T Consensus 35 mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~--eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~--AD~iI~~sP~Yn 110 (247)
T 2q62_A 35 PRILILYGSLRTVSYSRLLAEEARRLLEFFGA--EVKVFDPSGLPLPDAAPVSHPKVQELRELSIW--SEGQVWVSPERH 110 (247)
T ss_dssp CEEEEEECCCCSSCHHHHHHHHHHHHHHHTTC--EEEECCCTTCCCTTSSCTTSHHHHHHHHHHHH--CSEEEEEEECSS
T ss_pred CeEEEEEccCCCCCHHHHHHHHHHHHHhhCCC--EEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHH--CCEEEEEeCCCC
Confidence 589999999863 2345556666677777 45555555443 567777777766 54 444433334
Q ss_pred CchhHh----hh----------hccCCcEEEecCCC
Q 029271 119 AHLSGV----AA----------ANSQILVIRVPLLS 140 (196)
Q Consensus 119 a~L~gv----vA----------~~t~~PVIgvP~~~ 140 (196)
...|+. +- ....+|+.-+-+.+
T Consensus 111 ~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG 146 (247)
T 2q62_A 111 GAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSG 146 (247)
T ss_dssp SSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECS
T ss_pred CCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCC
Confidence 444443 32 23457777665544
No 226
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=53.01 E-value=50 Score=29.91 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=25.1
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEE
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIK 85 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~ 85 (196)
++|.|.+-+ .=|+|.+++..|++.|++|+..
T Consensus 18 ~~v~vy~~~--~Cp~C~~~k~~L~~~~i~~~~~ 48 (598)
T 2x8g_A 18 AAVILFSKT--TCPYCKKVKDVLAEAKIKHATI 48 (598)
T ss_dssp CSEEEEECT--TCHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEECC--CChhHHHHHHHHHHCCCCcEEE
Confidence 357777755 4599999999999999998754
No 227
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=52.70 E-value=34 Score=27.47 Aligned_cols=77 Identities=9% Similarity=0.003 Sum_probs=45.2
Q ss_pred CCCeEEEEEcCC------CCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCc----
Q 029271 51 DAPIVGIIMESD------LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH---- 120 (196)
Q Consensus 51 ~~~~V~IimGS~------SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~---- 120 (196)
..++|+||+-|+ -|. ...-+...|+++|+....... .--.++.+.+-++++-.++++++|+-.|.+.+
T Consensus 29 ~~~rvaIistGdEl~~G~~Ds-n~~~L~~~L~~~G~~v~~~~i-v~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~~D~ 106 (185)
T 3rfq_A 29 VVGRALVVVVDDRTAHGDEDH-SGPLVTELLTEAGFVVDGVVA-VEADEVDIRNALNTAVIGGVDLVVSVGGTGVTPRDV 106 (185)
T ss_dssp CCEEEEEEEECHHHHTTCCCS-HHHHHHHHHHHTTEEEEEEEE-ECSCHHHHHHHHHHHHHTTCSEEEEESCCSSSTTCC
T ss_pred CCCEEEEEEECcccCCCCcCc-HHHHHHHHHHHCCCEEEEEEE-eCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCccc
Confidence 356899997543 222 334567788999975432211 23345555555555433568999998877643
Q ss_pred hhHhhhhcc
Q 029271 121 LSGVAAANS 129 (196)
Q Consensus 121 L~gvvA~~t 129 (196)
.+-+++...
T Consensus 107 t~eal~~l~ 115 (185)
T 3rfq_A 107 TPESTREIL 115 (185)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHh
Confidence 455554443
No 228
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=52.66 E-value=97 Score=25.54 Aligned_cols=82 Identities=10% Similarity=0.176 Sum_probs=43.0
Q ss_pred CCeEEEEEcCCCCH----HHHHHHHHHHH-HhCCCeEEEEEcccCCch-HHHHHHHHHhhCCCeEEEEecCCCCchhHhh
Q 029271 52 APIVGIIMESDLDL----PVMNDAARTLS-DFGVPYEIKILPPHQNCK-EALSYALSAKERGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 52 ~~~V~IimGS~SD~----~~~~~~~~~l~-~~gi~~ev~V~SaHR~p~-~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv 125 (196)
+..|++++....+. ++..++...++ .+. .|.+.+...+...+ +..++++.+..++++-||....... ...+
T Consensus 68 s~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~-g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~--~~~~ 144 (366)
T 3h5t_A 68 AGAIGVLLTEDLTYAFEDMASVDFLAGVAQAAG-DTQLTLIPASPASSVDHVSAQQLVNNAAVDGVVIYSVAKG--DPHI 144 (366)
T ss_dssp CCEEEEEESSCTTHHHHSHHHHHHHHHHHHHSS-SCEEEEEECCCCTTCCHHHHHHHHHTCCCSCEEEESCCTT--CHHH
T ss_pred CCEEEEEecCCccccccCHHHHHHHHHHHHHHh-hCCEEEEEcCCCccHHHHHHHHHHHhCCCCEEEEecCCCC--hHHH
Confidence 45799999875331 23333333332 232 55666655554332 4566777777788864444332111 1222
Q ss_pred h--hccCCcEEEe
Q 029271 126 A--ANSQILVIRV 136 (196)
Q Consensus 126 A--~~t~~PVIgv 136 (196)
. ....+||+-+
T Consensus 145 ~~l~~~~iPvV~i 157 (366)
T 3h5t_A 145 DAIRARGLPAVIA 157 (366)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHCCCCEEEE
Confidence 2 2347888876
No 229
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=52.54 E-value=98 Score=25.53 Aligned_cols=65 Identities=12% Similarity=0.164 Sum_probs=43.1
Q ss_pred eEEEEEcCCCC--HHHHHHHHHHHHHhCCCeEEEE--EcccCCchHHHHHHHHHhhCCCeEEEEecCCC
Q 029271 54 IVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKI--LPPHQNCKEALSYALSAKERGIKIIIVGDGVE 118 (196)
Q Consensus 54 ~V~IimGS~SD--~~~~~~~~~~l~~~gi~~ev~V--~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s 118 (196)
+|++|.|.... ....+--...+++.|.++++.+ .+-+-.++.-.+..+++-++++++|++.++..
T Consensus 131 ~Ig~i~g~~~~~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~d~~ 199 (318)
T 2fqx_A 131 AVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGT 199 (318)
T ss_dssp EEEEEESCCSTTTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHHHHHHHHHHHHHTTCCEEEEECGGG
T ss_pred EEEEEeCcccHHHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 89999886432 2334445567788898776543 33344566667777766667899999887754
No 230
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=52.49 E-value=66 Score=25.59 Aligned_cols=26 Identities=19% Similarity=0.305 Sum_probs=14.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++- +...+.+.|.+-|.
T Consensus 29 ~k~vlITGas~g--IG~~la~~l~~~G~ 54 (262)
T 3rkr_A 29 GQVAVVTGASRG--IGAAIARKLGSLGA 54 (262)
T ss_dssp TCEEEESSTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 456667766653 44455555555553
No 231
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=52.23 E-value=58 Score=26.26 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=62.5
Q ss_pred CCCeEEEEEcCCCC--HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC--CchhHhh-
Q 029271 51 DAPIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE--AHLSGVA- 125 (196)
Q Consensus 51 ~~~~V~IimGS~SD--~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s--a~L~gvv- 125 (196)
...+|++|.|.... ....+..++.|+++|++++.... ...+...+.++++.. +.+.|++....- +.+..+.
T Consensus 139 g~~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~---~~~~~~~~~~~~l~~-~~dai~~~~D~~a~g~~~~l~~ 214 (302)
T 2qh8_A 139 NVKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATA---LKSADVQSATQAIAE-KSDVIYALIDNTVASAIEGMIV 214 (302)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEEC---SSGGGHHHHHHHHGG-GCSEEEECSCHHHHTTHHHHHH
T ss_pred CCcEEEEEecCCCcchHHHHHHHHHHHHHcCCEEEEEec---CChHHHHHHHHHHhc-cCCEEEECCcHhHHHHHHHHHH
Confidence 34589999987532 23456777888999998654322 234666666666643 467777643221 1111121
Q ss_pred -hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecC---ChhhHHHHHHHHHc
Q 029271 126 -AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN---NAKNAALYAVKVLG 180 (196)
Q Consensus 126 -A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~---~~~nAA~~AaqILa 180 (196)
+-...+||||.= .. .++ + | +.+||..+ =|.-||.++.++|.
T Consensus 215 ~~~~~~i~vig~d-------~~-~~~--~-~---~Lttv~~~~~~~G~~Aa~~l~~~l~ 259 (302)
T 2qh8_A 215 AANQAKTPVFGAA-------TS-YVE--R-G---AIASLGFDYYQIGVQTADYVAAILE 259 (302)
T ss_dssp HHHHTTCCEEESS-------HH-HHH--T-T---CSEEEECCHHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCEEECC-------HH-HHh--C-C---cEEEEeCCHHHHHHHHHHHHHHHHC
Confidence 113578887731 11 122 1 3 46888655 35556666666664
No 232
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=52.12 E-value=70 Score=24.75 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=14.1
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
++.+.+++++..++ +++++|-.||..
T Consensus 70 ~~~v~~~~~~~~~~~g~id~li~~Ag~~ 97 (244)
T 2bd0_A 70 MADVRRLTTHIVERYGHIDCLVNNAGVG 97 (244)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEcCCcC
Confidence 44444444444322 467777777753
No 233
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=52.07 E-value=58 Score=26.08 Aligned_cols=27 Identities=7% Similarity=0.022 Sum_probs=16.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+.+ -+...+++.|.+-|.
T Consensus 9 ~~k~vlVTGas~--gIG~aia~~l~~~G~ 35 (262)
T 3pk0_A 9 QGRSVVVTGGTK--GIGRGIATVFARAGA 35 (262)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 356777777776 345556666666664
No 234
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=52.06 E-value=75 Score=24.86 Aligned_cols=26 Identities=27% Similarity=0.230 Sum_probs=15.0
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+.+.|.+-|.
T Consensus 9 ~k~vlITGas~--giG~~~a~~l~~~G~ 34 (253)
T 3qiv_A 9 NKVGIVTGSGG--GIGQAYAEALAREGA 34 (253)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 46677777665 344555555555554
No 235
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=52.06 E-value=30 Score=30.18 Aligned_cols=54 Identities=9% Similarity=0.046 Sum_probs=45.3
Q ss_pred CeEEEEEcCCC-CHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDL-DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~S-D~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+.+|+.|... +.-+.+--.+.|+++|+.++.......-+.+++++.++++.++
T Consensus 39 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 93 (300)
T 4a26_A 39 GLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNND 93 (300)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 36778888663 3567778888999999999999999999999999999998765
No 236
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=52.01 E-value=9.9 Score=37.36 Aligned_cols=44 Identities=14% Similarity=0.153 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhCCCeEEEEecCCCCchhHh--hhh------ccCCcEEEecCC
Q 029271 95 EALSYALSAKERGIKIIIVGDGVEAHLSGV--AAA------NSQILVIRVPLL 139 (196)
Q Consensus 95 ~~~~~~~~~e~~~~~V~IavAG~sa~L~gv--vA~------~t~~PVIgvP~~ 139 (196)
...++++++++.+++.+|++.|-. .+-+. ++- ...+||||||-.
T Consensus 472 ~~~~~~~~l~~~~Id~LvvIGGdg-S~~~a~~L~~~~~~~~~~~i~vvgiPkT 523 (766)
T 3o8o_B 472 DLGMIAYYFQKYEFDGLIIVGGFE-AFESLHQLERARESYPAFRIPMVLIPAT 523 (766)
T ss_dssp CHHHHHHHHHHHTCSEEEEEESHH-HHHHHHHHHTTTTTCGGGCSCCCEEEBC
T ss_pred hHHHHHHHHHHhCCCEEEEeCCch-HHHHHHHHHHHHHhcCccCCcEEeeccc
Confidence 466788889999999888887753 22221 211 146899999975
No 237
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=51.71 E-value=47 Score=27.04 Aligned_cols=27 Identities=11% Similarity=0.126 Sum_probs=20.3
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ -+...+++.|-+-|.
T Consensus 31 ~gk~~lVTGas~--GIG~aia~~la~~G~ 57 (276)
T 3r1i_A 31 SGKRALITGAST--GIGKKVALAYAEAGA 57 (276)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 457999999987 556677777777775
No 238
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=51.55 E-value=72 Score=27.76 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=46.7
Q ss_pred CeEEEEEcCCC------CHHHHHHHHHHHHHhCCCeEEEEEcccCC--------chHHHHHHHHHhhCCCeEEEEecCCC
Q 029271 53 PIVGIIMESDL------DLPVMNDAARTLSDFGVPYEIKILPPHQN--------CKEALSYALSAKERGIKIIIVGDGVE 118 (196)
Q Consensus 53 ~~V~IimGS~S------D~~~~~~~~~~l~~~gi~~ev~V~SaHR~--------p~~~~~~~~~~e~~~~~V~IavAG~s 118 (196)
-+|+||+=|.. +.+..+.+.+.|+++|..+.+.= .+.+. -+|..++.+.+.+..++.|+++-|+.
T Consensus 6 D~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~G~~v~~~~-~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 84 (346)
T 4eys_A 6 STIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNPIFLP-HSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCAIGGD 84 (346)
T ss_dssp CEEEEECSSCCGGGSGGGHHHHHHHHHHHHHTTCEEEECT-TTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEECCCCS
T ss_pred cEEEEEeCCCcccccccCHHHHHHHHHHHHhCCCEEEECC-chhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 47999984432 35678999999999998554420 22232 35667777777777889999999985
Q ss_pred Cc
Q 029271 119 AH 120 (196)
Q Consensus 119 a~ 120 (196)
+.
T Consensus 85 g~ 86 (346)
T 4eys_A 85 DT 86 (346)
T ss_dssp CG
T ss_pred CH
Confidence 54
No 239
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=51.54 E-value=67 Score=24.03 Aligned_cols=77 Identities=14% Similarity=0.037 Sum_probs=54.0
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHhCCCeE---------------EEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCc
Q 029271 56 GIIMESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 120 (196)
Q Consensus 56 ~IimGS~SD~~~~~~~~~~l~~~gi~~e---------------v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~ 120 (196)
.++.|.-+-...++.....|..+|.++. +=+.|..+...++.+.++.++++|++++ ++.+..+
T Consensus 43 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~~~~- 120 (180)
T 1jeo_A 43 IFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNII-AIVCECG- 120 (180)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEE-EEESSCC-
T ss_pred EEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEE-EEeCCCC-
Confidence 4456666778899999999999998644 4567777888889999999888888653 4444433
Q ss_pred hhHhhhhccCCcEEEecC
Q 029271 121 LSGVAAANSQILVIRVPL 138 (196)
Q Consensus 121 L~gvvA~~t~~PVIgvP~ 138 (196)
+ ++...++ +|-+|.
T Consensus 121 --s-l~~~ad~-~l~~~~ 134 (180)
T 1jeo_A 121 --N-VVEFADL-TIPLEV 134 (180)
T ss_dssp --G-GGGGCSE-EEECCC
T ss_pred --h-HHHhCCE-EEEeCC
Confidence 2 4455554 455665
No 240
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=51.53 E-value=75 Score=23.90 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=54.9
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeE---------------EEEEcccCCchHHHHHHHHHhhCCCeEEEEecCC-
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGV- 117 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~e---------------v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~- 117 (196)
+|. +.|.-+-...++.....|..+|.++. +=+.|..+...++.+.++.+.++|++++ ++.+.
T Consensus 39 ~I~-i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~~~ 116 (186)
T 1m3s_A 39 QIF-TAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVA-ALTINP 116 (186)
T ss_dssp CEE-EECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEE-EEESCT
T ss_pred eEE-EEecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEE-EEECCC
Confidence 444 45555558899999999999998754 4667788888889999999999998754 44443
Q ss_pred CCchhHhhhhccCCcEEEecCCC
Q 029271 118 EAHLSGVAAANSQILVIRVPLLS 140 (196)
Q Consensus 118 sa~L~gvvA~~t~~PVIgvP~~~ 140 (196)
.+-| +...++ +|-+|...
T Consensus 117 ~s~l----~~~ad~-~l~~~~~~ 134 (186)
T 1m3s_A 117 ESSI----GKQADL-IIRMPGSP 134 (186)
T ss_dssp TSHH----HHHCSE-EEECSCCS
T ss_pred CCch----HHhCCE-EEEeCCcc
Confidence 3333 344444 56666543
No 241
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=51.38 E-value=32 Score=26.59 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=44.7
Q ss_pred CCCCeEEEEEcCCC-------CHHHHHHHHHHHHHh-----CCCeE-EEEEcccCCchHHHHHHHHHhh-CCCeEEEEec
Q 029271 50 ADAPIVGIIMESDL-------DLPVMNDAARTLSDF-----GVPYE-IKILPPHQNCKEALSYALSAKE-RGIKIIIVGD 115 (196)
Q Consensus 50 ~~~~~V~IimGS~S-------D~~~~~~~~~~l~~~-----gi~~e-v~V~SaHR~p~~~~~~~~~~e~-~~~~V~IavA 115 (196)
-..++|+||+-|+. |.. ..-+.+.|+++ |+... ..+ .--.++.+.+-++++-+ .+++++|+-.
T Consensus 3 ~~~~rv~IistGde~~~G~~~d~n-~~~l~~~l~~~~~~~~G~~v~~~~i--v~Dd~~~i~~~l~~~~~~~~~DlVittG 79 (167)
T 1uuy_A 3 GPEYKVAILTVSDTVSAGAGPDRS-GPRAVSVVDSSSEKLGGAKVVATAV--VPDEVERIKDILQKWSDVDEMDLILTLG 79 (167)
T ss_dssp CCSEEEEEEEECHHHHTTSSCCSH-HHHHHHHHHHTTTTTTSEEEEEEEE--ECSCHHHHHHHHHHHHHTSCCSEEEEES
T ss_pred CCCcEEEEEEECCcccCCCCccCc-HHHHHHHHHhccccCCCcEEeEEEE--cCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 34568999985431 110 12345677777 76432 222 22344555555555543 4689999988
Q ss_pred CCCC----chhHhhhhccCCc
Q 029271 116 GVEA----HLSGVAAANSQIL 132 (196)
Q Consensus 116 G~sa----~L~gvvA~~t~~P 132 (196)
|.+- ..+-+++.....+
T Consensus 80 G~g~g~~D~t~~a~~~~~~~~ 100 (167)
T 1uuy_A 80 GTGFTPRDVTPEATKKVIERE 100 (167)
T ss_dssp CCSSSTTCCHHHHHHHHCSEE
T ss_pred CCCCCCCCchHHHHHHHhcCC
Confidence 8764 4566666554433
No 242
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=51.07 E-value=75 Score=25.32 Aligned_cols=27 Identities=15% Similarity=0.119 Sum_probs=19.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+.+- +...+++.|.+-|.
T Consensus 7 ~gk~~lVTGas~g--IG~a~a~~l~~~G~ 33 (255)
T 4eso_A 7 QGKKAIVIGGTHG--MGLATVRRLVEGGA 33 (255)
T ss_dssp TTCEEEEETCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 4578899998874 55667777777775
No 243
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=50.90 E-value=43 Score=28.17 Aligned_cols=58 Identities=9% Similarity=-0.022 Sum_probs=43.5
Q ss_pred CeEEEEEcCCCCH--------------HHHHHHHHHHHHhCCCeEEEEEcc------cC-CchHHHHHHHHHhhCCCeEE
Q 029271 53 PIVGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKII 111 (196)
Q Consensus 53 ~~V~IimGS~SD~--------------~~~~~~~~~l~~~gi~~ev~V~Sa------HR-~p~~~~~~~~~~e~~~~~V~ 111 (196)
..|.| ..+.||. +.+.++.+.+++.|+++++.++-. .| .++.+.++++.+++-|++.|
T Consensus 95 ~~v~i-~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 173 (298)
T 2cw6_A 95 KEVVI-FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEI 173 (298)
T ss_dssp SEEEE-EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEE
T ss_pred CEEEE-EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 34554 6688887 566777888889999888877633 23 57899999999999899643
No 244
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=50.72 E-value=58 Score=26.71 Aligned_cols=66 Identities=8% Similarity=0.101 Sum_probs=41.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc------------------------cCCchHHHHHHHHHhhC-
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP------------------------HQNCKEALSYALSAKER- 106 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa------------------------HR~p~~~~~~~~~~e~~- 106 (196)
..++++|+|+.+...+...+++.|.+-|.. +-+.+- -..++.+.+++++..++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 468999999987755666777777777753 322211 12334455555555432
Q ss_pred -CCeEEEEecCCCC
Q 029271 107 -GIKIIIVGDGVEA 119 (196)
Q Consensus 107 -~~~V~IavAG~sa 119 (196)
+++++|-.||...
T Consensus 108 g~iD~lVnnAG~~~ 121 (293)
T 3grk_A 108 GKLDFLVHAIGFSD 121 (293)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 5688998888754
No 245
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=50.71 E-value=25 Score=31.25 Aligned_cols=81 Identities=14% Similarity=0.078 Sum_probs=54.6
Q ss_pred eEEEEEcCCC----CHHHHHHHHHHHHHhCCCeEEEEEcccC--------CchHHHHHHHHHhhCCCeEEEEecCCCCc-
Q 029271 54 IVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ--------NCKEALSYALSAKERGIKIIIVGDGVEAH- 120 (196)
Q Consensus 54 ~V~IimGS~S----D~~~~~~~~~~l~~~gi~~ev~V~SaHR--------~p~~~~~~~~~~e~~~~~V~IavAG~sa~- 120 (196)
+|+||+=|.. |.+..+.+.+.|+++|..+.+.=. +.+ .-+|..++.+.+.+..++.|+++-|+.+.
T Consensus 45 ~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyga~ 123 (371)
T 3tla_A 45 TIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKL-TGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSN 123 (371)
T ss_dssp EEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTT-TTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCSCGG
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCc-hhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccHH
Confidence 7999986643 567889999999999986554311 111 12567778777777788999999998654
Q ss_pred -h-h----HhhhhccCCcEEEe
Q 029271 121 -L-S----GVAAANSQILVIRV 136 (196)
Q Consensus 121 -L-~----gvvA~~t~~PVIgv 136 (196)
| + ..+. ..+++.||.
T Consensus 124 rlLp~LD~~~i~-~~PK~fiGy 144 (371)
T 3tla_A 124 SLLPFLDYDAII-ANPKIIIGY 144 (371)
T ss_dssp GGGGGSCHHHHH-HSCCEEEEC
T ss_pred HHHhhcChhhHH-hCCcEEEEe
Confidence 2 2 1222 246667763
No 246
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=50.71 E-value=30 Score=25.83 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=50.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHH---hCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhcc
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSD---FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 129 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~---~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t 129 (196)
..|.|.+- +-=|+|.+++..|++ +|++|+..=...+..++++.++++++ .|..
T Consensus 14 ~~Vvvysk--~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~----------------------~G~~ 69 (127)
T 3l4n_A 14 SPIIIFSK--STCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLV----------------------TGRG 69 (127)
T ss_dssp CSEEEEEC--TTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHH----------------------HSCC
T ss_pred CCEEEEEc--CCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHH----------------------cCCC
Confidence 35777765 557999999999997 48888876666666666777766543 2446
Q ss_pred CCcEEEecCCCCCCChhh-hhhhhc
Q 029271 130 QILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 130 ~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
+.|+|-+ .+...+|.| |..+.+
T Consensus 70 tVP~IfI--~G~~IGG~ddl~~l~~ 92 (127)
T 3l4n_A 70 TVPNLLV--NGVSRGGNEEIKKLHT 92 (127)
T ss_dssp SSCEEEE--TTEECCCHHHHHHHHH
T ss_pred CcceEEE--CCEEEcCHHHHHHHHH
Confidence 7787743 233457776 665544
No 247
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=50.64 E-value=93 Score=24.73 Aligned_cols=27 Identities=15% Similarity=0.052 Sum_probs=19.1
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+++ -+...+++.|-+-|.
T Consensus 9 ~gk~vlVTGas~--gIG~~ia~~l~~~G~ 35 (287)
T 3pxx_A 9 QDKVVLVTGGAR--GQGRSHAVKLAEEGA 35 (287)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 357888888877 456667777776674
No 248
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=50.51 E-value=59 Score=26.55 Aligned_cols=43 Identities=12% Similarity=0.113 Sum_probs=25.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHH
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 100 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~ 100 (196)
..++++|+|+.+ .+...+++.|.+-|.. |.-.-|.++.+.+..
T Consensus 7 ~gk~vlVTGas~--GIG~aia~~la~~G~~----V~~~~r~~~~~~~~~ 49 (280)
T 3tox_A 7 EGKIAIVTGASS--GIGRAAALLFAREGAK----VVVTARNGNALAELT 49 (280)
T ss_dssp TTCEEEESSTTS--HHHHHHHHHHHHTTCE----EEECCSCHHHHHHHH
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCE----EEEEECCHHHHHHHH
Confidence 457888888877 4455666677666642 333345554444433
No 249
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=50.47 E-value=1.1e+02 Score=25.72 Aligned_cols=125 Identities=11% Similarity=0.020 Sum_probs=64.4
Q ss_pred CCeEEEEEcCC-CCHHHHHHHHHHHHHhCCCeEEEEEcc-----cCCchH--------HHHHHHHHhhCCCeEEEEecCC
Q 029271 52 APIVGIIMESD-LDLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKE--------ALSYALSAKERGIKIIIVGDGV 117 (196)
Q Consensus 52 ~~~V~IimGS~-SD~~~~~~~~~~l~~~gi~~ev~V~Sa-----HR~p~~--------~~~~~~~~e~~~~~V~IavAG~ 117 (196)
.+.|.|..||. ......+.+.+.|+.++..+-+ +++- ...++. -.++ + ..+++||+=+|.
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~~~~~v~-~~g~~~~~~~~~~~~v~~~~~~~~~~~---l--~~~d~~v~~~G~ 311 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVIL-SRGWADLVLPDDGADCFAIGEVNHQVL---F--GRVAAVIHHGGA 311 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHTTCCEEE-CTTCTTCCCSSCGGGEEECSSCCHHHH---G--GGSSEEEECCCH
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHCCCeEEE-EeCCCcccccCCCCCEEEeCcCChHHH---H--hhCCEEEeCCCh
Confidence 35566666776 4678888888999988764322 1110 011111 0122 2 337899986654
Q ss_pred CCchhHhhhh-ccCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecC-ChhhHHHHHHHHHccCCHHHHHHHHHHH
Q 029271 118 EAHLSGVAAA-NSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGIADEDLLERIRKYV 194 (196)
Q Consensus 118 sa~L~gvvA~-~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~-~~~nAA~~AaqILa~~d~~l~~kl~~~r 194 (196)
.++.-+ ..-.|+|.+|... +..... .+ .+ .|+++ + +. +..++..++..|..+.|+..+++.+..+
T Consensus 312 ----~t~~Ea~~~G~P~i~~p~~~-dQ~~na~~l--~~--~g~g~--~-~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~ 379 (415)
T 1iir_A 312 ----GTTHVAARAGAPQILLPQMA-DQPYYAGRV--AE--LGVGV--A-HDGPIPTFDSLSAALATALTPETHARATAVA 379 (415)
T ss_dssp ----HHHHHHHHHTCCEEECCCST-THHHHHHHH--HH--HTSEE--E-CSSSSCCHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred ----hHHHHHHHcCCCEEECCCCC-ccHHHHHHH--HH--CCCcc--c-CCcCCCCHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 223322 3668999999843 221111 22 12 34433 2 23 1224444444444447788888877654
No 250
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=50.33 E-value=63 Score=25.61 Aligned_cols=27 Identities=15% Similarity=0.182 Sum_probs=19.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+.+ .+...+++.|.+-|.
T Consensus 8 ~gk~~lVTGas~--gIG~a~a~~l~~~G~ 34 (248)
T 3op4_A 8 EGKVALVTGASR--GIGKAIAELLAERGA 34 (248)
T ss_dssp TTCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 357899999887 456667777777775
No 251
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=50.24 E-value=77 Score=25.02 Aligned_cols=26 Identities=19% Similarity=0.277 Sum_probs=14.2
Q ss_pred chHHHHHHHHHhh--CCCeEEEEecCCC
Q 029271 93 CKEALSYALSAKE--RGIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~--~~~~V~IavAG~s 118 (196)
++.+.+++++..+ .+++++|-.||..
T Consensus 68 ~~~~~~~~~~~~~~~g~id~lv~nAg~~ 95 (247)
T 2jah_A 68 RQGVDAAVASTVEALGGLDILVNNAGIM 95 (247)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3444444443332 2568888888753
No 252
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=49.92 E-value=54 Score=27.99 Aligned_cols=108 Identities=10% Similarity=-0.020 Sum_probs=52.3
Q ss_pred CCCeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhh-
Q 029271 51 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 126 (196)
Q Consensus 51 ~~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA- 126 (196)
.+..|++++. .++. ...+.+.+.+++.|..+.+.. .... .++++.+..++++-+|... .-...+.
T Consensus 24 ~s~~Igvv~~-~~~~f~~~l~~gi~~~a~~~g~~~~i~~--~~~~----~~~i~~l~~~~vDGiIi~~----~~~~~~~~ 92 (412)
T 4fe7_A 24 KRHRITLLFN-ANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDF----RARIDKIKDWLGDGVIADF----DDKQIEQA 92 (412)
T ss_dssp CCEEEEEECC-TTSHHHHHHHHHHHHHHHHHTCCEEEEE--CC-C----C--------CCCSEEEEET----TCHHHHHH
T ss_pred CCceEEEEeC-CcchhhHHHHHHHHHHHHhcCCCeEEEe--cCCc----cchhhhHhcCCCCEEEEec----CChHHHHH
Confidence 3457999994 3332 456777888889998766544 2222 2234555567786555522 1123332
Q ss_pred -hccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHc
Q 029271 127 -ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLG 180 (196)
Q Consensus 127 -~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa 180 (196)
....+|||.+=...... +.+.++..|++||-.++-+++-.++.
T Consensus 93 l~~~~iPvV~i~~~~~~~-----------~~~~~~~~V~~D~~~~g~~a~~~L~~ 136 (412)
T 4fe7_A 93 LADVDVPIVGVGGSYHLA-----------ESYPPVHYIATDNYALVESAFLHLKE 136 (412)
T ss_dssp HTTCCSCEEEEEECCSSG-----------GGSCSSEEEEECHHHHHHHHHHHHHH
T ss_pred HhhCCCCEEEecCCcccc-----------ccCCCCCEEEeCHHHHHHHHHHHHHH
Confidence 23467887653221110 00112455666766655555544444
No 253
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=49.67 E-value=62 Score=25.73 Aligned_cols=43 Identities=12% Similarity=0.030 Sum_probs=24.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHH
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 100 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~ 100 (196)
..++++|+|+++- +...+++.|.+-|. .+-+ .-|.++.+.+..
T Consensus 6 ~~k~~lVTGas~G--IG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~ 48 (250)
T 3nyw_A 6 QKGLAIITGASQG--IGAVIAAGLATDGY--RVVL--IARSKQNLEKVH 48 (250)
T ss_dssp CCCEEEEESTTSH--HHHHHHHHHHHHTC--EEEE--EESCHHHHHHHH
T ss_pred CCCEEEEECCCcH--HHHHHHHHHHHCCC--EEEE--EECCHHHHHHHH
Confidence 3578888888874 45666666666664 2322 235544444433
No 254
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=49.67 E-value=34 Score=29.58 Aligned_cols=54 Identities=19% Similarity=0.287 Sum_probs=45.0
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+.+|+.|...+ .-+.+--.+.|+++|+.++..-....-+.+++++.++++.++
T Consensus 36 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 90 (285)
T 3l07_A 36 KLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNND 90 (285)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 467777787654 456677888999999999999999999999999999988765
No 255
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=49.47 E-value=22 Score=27.14 Aligned_cols=32 Identities=19% Similarity=0.233 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcccCCchHHH
Q 029271 66 PVMNDAARTLSDFGVPYEIKILPPHQNCKEAL 97 (196)
Q Consensus 66 ~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~ 97 (196)
|.+++++-.|++.|++||..-......+++..
T Consensus 13 P~~~rvr~~L~e~gi~~e~~~v~~~~~~~~~~ 44 (210)
T 4hoj_A 13 PFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLA 44 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCHHHH
T ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCHHHH
Confidence 89999999999999999987766655565443
No 256
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=49.32 E-value=11 Score=34.25 Aligned_cols=49 Identities=22% Similarity=0.131 Sum_probs=32.4
Q ss_pred CCchHHHHHHHHHhhCCCeEEEEecCC-CCchhHhhhh-----ccCCcEEEecCC
Q 029271 91 QNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAA-----NSQILVIRVPLL 139 (196)
Q Consensus 91 R~p~~~~~~~~~~e~~~~~V~IavAG~-sa~L~gvvA~-----~t~~PVIgvP~~ 139 (196)
++++...++++++++.+++.+|++.|- |..-+-.++- ...+||||||-.
T Consensus 88 ~~~~~~~~~~~~l~~~~Id~Lv~IGGdgS~~~A~~L~~~~~~~g~~i~vIGiPkT 142 (419)
T 3hno_A 88 QNRREYERLIEVFKAHDIGYFFYNGGGDSADTCLKVSQLSGTLGYPIQAIHVPKT 142 (419)
T ss_dssp -CHHHHHHHHHHHHHTTEEEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEECC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEEeccc
Confidence 355677778888888888878777774 3222333332 246999999975
No 257
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=49.19 E-value=59 Score=26.36 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=15.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+.+- +...+++.|.+-|.
T Consensus 25 ~gk~~lVTGas~g--IG~aia~~la~~G~ 51 (271)
T 4ibo_A 25 GGRTALVTGSSRG--LGRAMAEGLAVAGA 51 (271)
T ss_dssp TTCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 3567777777663 34455555555554
No 258
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=49.11 E-value=41 Score=28.28 Aligned_cols=64 Identities=17% Similarity=0.111 Sum_probs=35.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCC---------------------eEEEEEcccCCchHHHHHHHHHhhC--CC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVP---------------------YEIKILPPHQNCKEALSYALSAKER--GI 108 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~---------------------~ev~V~SaHR~p~~~~~~~~~~e~~--~~ 108 (196)
+.||++|+|+.+- +...+++.|-+-|.. +.. +..=-..++.+.+++++..++ ++
T Consensus 28 ~gKvalVTGas~G--IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~-~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 28 NAKIAVITGATSG--IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVG-IQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTCEEEEESCSSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEE-EECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCCEEEEeCcCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEE-EEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999884 445555555555542 111 111123445555555554432 35
Q ss_pred eEEEEecCCC
Q 029271 109 KIIIVGDGVE 118 (196)
Q Consensus 109 ~V~IavAG~s 118 (196)
+++|--||..
T Consensus 105 DiLVNNAG~~ 114 (273)
T 4fgs_A 105 DVLFVNAGGG 114 (273)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 7888877753
No 259
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=48.91 E-value=93 Score=25.40 Aligned_cols=27 Identities=22% Similarity=0.075 Sum_probs=18.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+.+ .+...+++.|.+-|.
T Consensus 27 ~gk~~lVTGas~--GIG~aia~~la~~G~ 53 (299)
T 3t7c_A 27 EGKVAFITGAAR--GQGRSHAITLAREGA 53 (299)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 357888888877 445566666666665
No 260
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=48.83 E-value=91 Score=25.11 Aligned_cols=26 Identities=19% Similarity=0.236 Sum_probs=16.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|.+-|.
T Consensus 22 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 47 (277)
T 2rhc_B 22 SEVALVTGATS--GIGLEIARRLGKEGL 47 (277)
T ss_dssp SCEEEEETCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 46777777766 445556666655553
No 261
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=48.78 E-value=68 Score=30.06 Aligned_cols=59 Identities=15% Similarity=0.004 Sum_probs=46.5
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc--ccC-CchHHHHHHHHHhhCCCeEEE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP--PHQ-NCKEALSYALSAKERGIKIII 112 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S--aHR-~p~~~~~~~~~~e~~~~~V~I 112 (196)
.+.-|..+.||..-++++.+.+++.|..++..++- ..| +++.+.++++++.+-|++.|.
T Consensus 132 d~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~ 193 (539)
T 1rqb_A 132 DVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIA 193 (539)
T ss_dssp CEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred CEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 45556789999999999999999999987766632 222 678899999999998997443
No 262
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=48.64 E-value=37 Score=29.42 Aligned_cols=54 Identities=11% Similarity=0.138 Sum_probs=44.7
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+.+|+.|...+ .-+.+--.+.|+++|+.++.......-+.+++++.++++.++
T Consensus 37 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 91 (286)
T 4a5o_A 37 GLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDD 91 (286)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 367777786643 456777888999999999999999999999999999988765
No 263
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=48.57 E-value=96 Score=24.89 Aligned_cols=28 Identities=14% Similarity=0.041 Sum_probs=21.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVP 81 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~ 81 (196)
.+++++|+|+.+ .+...+++.|.+-|..
T Consensus 10 ~~k~~lVTGas~--gIG~aia~~la~~G~~ 37 (286)
T 3uve_A 10 EGKVAFVTGAAR--GQGRSHAVRLAQEGAD 37 (286)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTCE
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCCe
Confidence 468999999987 4567788888877854
No 264
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=48.48 E-value=5 Score=34.36 Aligned_cols=89 Identities=17% Similarity=0.128 Sum_probs=57.7
Q ss_pred cccccCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc-c-----cCCchHHHHHHH----HHhhCCCe-EEEE
Q 029271 45 FLLLAADAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP-P-----HQNCKEALSYAL----SAKERGIK-IIIV 113 (196)
Q Consensus 45 ~~~~~~~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S-a-----HR~p~~~~~~~~----~~e~~~~~-V~Ia 113 (196)
+..|.+++..|+|+=.+--=+.+++++.+.|-...+ +.+.- + -|+.+++.++.. ..++.|++ ++||
T Consensus 17 ~~~~~~~~~~IgvfDSGvGGLtv~~~i~~~lP~e~~---iy~~D~a~~PYG~ks~e~i~~~~~~~~~~L~~~g~d~IVIA 93 (274)
T 3uhf_A 17 NLYFQSNAMKIGVFDSGVGGLSVLKSLYEARLFDEI---IYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQIDMLIIA 93 (274)
T ss_dssp CCCCCCSCCEEEEEESSSTTHHHHHHHHHTTCCSEE---EEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEEC
T ss_pred eeeccCCCCeEEEEECCCChHHHHHHHHHHCCCCCE---EEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEe
Confidence 444555566899999999999999999877633222 12221 2 378877776654 55677886 5555
Q ss_pred ecCCCC-chhHhhhhccCCcEEEec
Q 029271 114 GDGVEA-HLSGVAAANSQILVIRVP 137 (196)
Q Consensus 114 vAG~sa-~L~gvvA~~t~~PVIgvP 137 (196)
+--.++ +|. -+-...+.||||+-
T Consensus 94 CNTa~~~al~-~lr~~~~iPvigii 117 (274)
T 3uhf_A 94 CNTASAYALD-ALRAKAHFPVYGVI 117 (274)
T ss_dssp CHHHHHHSHH-HHHHHCSSCEECSH
T ss_pred CCChhHHHHH-HHHHhcCCCEEcCC
Confidence 544443 344 45566789999964
No 265
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=48.35 E-value=67 Score=25.77 Aligned_cols=119 Identities=13% Similarity=-0.029 Sum_probs=60.0
Q ss_pred CCCeEEEEEcCCCCHH---HHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC--CCeEEEEecCCCCchhHhh
Q 029271 51 DAPIVGIIMESDLDLP---VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER--GIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 51 ~~~~V~IimGS~SD~~---~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~--~~~V~IavAG~sa~L~gvv 125 (196)
...+|+++.|...+.. ..+-..+.|++.|+++.-.. ...-.++...+.++++-.+ ..+.|++.... .++ |++
T Consensus 122 G~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~-~a~-g~~ 198 (313)
T 2h3h_A 122 GKGKVVIGTGSLTAMNSLQRIQGFKDAIKDSEIEIVDIL-NDEEDGARAVSLAEAALNAHPDLDAFFGVYAY-NGP-AQA 198 (313)
T ss_dssp SCSEEEEEESCSSCHHHHHHHHHHHHHHTTSSCEEEEEE-ECSSCHHHHHHHHHHHHHHCTTCCEEEECSTT-HHH-HHH
T ss_pred CCCEEEEEECCCCCccHHHHHHHHHHHhcCCCCEEEEee-cCCCCHHHHHHHHHHHHHHCcCceEEEEcCCC-ccH-HHH
Confidence 4468999998755443 33445666777888754322 2333455544444444222 35788876433 222 444
Q ss_pred hhccCCcEEEecCCCCCCChhh-h---hhhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 029271 126 AANSQILVIRVPLLSEDWSEDD-V---INSIRMPSHVQVASVPRNNAKNAALYAVKVL 179 (196)
Q Consensus 126 A~~t~~PVIgvP~~~~~~~G~D-L---lS~lqmPsGvpvatV~I~~~~nAA~~AaqIL 179 (196)
.+....- +|-.- ..-|+| . ...+. +|.+.+||.. +++.-|..|+++|
T Consensus 199 ~al~~~G---~p~dv-~vvg~d~~~~~~~~~~--~g~~lttv~~-~~~~~g~~av~~l 249 (313)
T 2h3h_A 199 LVVKNAG---KVGKV-KIVCFDTTPDILQYVK--EGVIQATMGQ-RPYMMGYLSVTVL 249 (313)
T ss_dssp HHHHHTT---CTTTS-EEEEECCCHHHHHHHH--HTSCSEEEEC-CHHHHHHHHHHHH
T ss_pred HHHHHcC---CCCCe-EEEEeCCCHHHHHHHH--cCCeEEEEec-CHHHHHHHHHHHH
Confidence 4432221 23111 122333 2 22333 5656788854 4555555555543
No 266
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=48.35 E-value=70 Score=25.96 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=14.8
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
++.+.+++++..++ +++++|-.||..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 65 RHSVAAFAQAAVDTWGRIDVLVNNAGVM 92 (264)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 44455555444332 467888888764
No 267
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=48.13 E-value=51 Score=27.82 Aligned_cols=46 Identities=9% Similarity=-0.079 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc------cC-CchHHHHHHHHHhhCCCeEE
Q 029271 66 PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKII 111 (196)
Q Consensus 66 ~~~~~~~~~l~~~gi~~ev~V~Sa------HR-~p~~~~~~~~~~e~~~~~V~ 111 (196)
+.++++.+.+++.|+.++..+... .| .|+.+.++++.+++-|++.|
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 176 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEV 176 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 567788888889999888777654 23 57899999999988899644
No 268
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=48.06 E-value=55 Score=26.06 Aligned_cols=26 Identities=19% Similarity=0.105 Sum_probs=16.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+++.|.+-|.
T Consensus 6 ~k~vlVTGas~--gIG~aia~~l~~~G~ 31 (257)
T 3imf_A 6 EKVVIITGGSS--GMGKGMATRFAKEGA 31 (257)
T ss_dssp TCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 46777777776 445566666666664
No 269
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=47.90 E-value=43 Score=27.15 Aligned_cols=26 Identities=19% Similarity=0.157 Sum_probs=15.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+.+ -+...+++.|-+-|.
T Consensus 28 ~k~~lVTGas~--GIG~aia~~la~~G~ 53 (270)
T 3ftp_A 28 KQVAIVTGASR--GIGRAIALELARRGA 53 (270)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 46777777766 344555555555554
No 270
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=47.87 E-value=31 Score=30.00 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=47.4
Q ss_pred eEEEEEcCCC----CHHHHHHHHHHHHHhCCCeEEEEEcccC--------CchHHHHHHHHHhhCCCeEEEEecCCCCc
Q 029271 54 IVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ--------NCKEALSYALSAKERGIKIIIVGDGVEAH 120 (196)
Q Consensus 54 ~V~IimGS~S----D~~~~~~~~~~l~~~gi~~ev~V~SaHR--------~p~~~~~~~~~~e~~~~~V~IavAG~sa~ 120 (196)
+|+||+=|.. |.+..+.+.+.|+++|..+.+.=. +.+ .-+|..++.+.+.+..++.|+++-|+.+.
T Consensus 14 ~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~-~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (331)
T 4e5s_A 14 EIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTH-AEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYNS 91 (331)
T ss_dssp EEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTT-TTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred EEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCc-hhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 7999984433 578899999999999996554211 111 12467778777777788999999998554
No 271
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=47.70 E-value=41 Score=29.11 Aligned_cols=54 Identities=11% Similarity=0.121 Sum_probs=44.8
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+.+|+.|...+ .-+.+--.+.|+++|+.++.......-+.+++++.++++.++
T Consensus 35 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d 89 (285)
T 3p2o_A 35 CLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHD 89 (285)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 467777786644 456777888999999999999999888999999999988765
No 272
>1g2h_A Transcriptional regulatory protein TYRR homolog; protein structure, , DNA-binding domain, helix- turn-helix motif; NMR {Haemophilus influenzae} SCOP: a.4.1.12
Probab=47.52 E-value=9.3 Score=24.99 Aligned_cols=21 Identities=14% Similarity=0.442 Sum_probs=18.6
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 029271 174 YAVKVLGIADEDLLERIRKYV 194 (196)
Q Consensus 174 ~AaqILa~~d~~l~~kl~~~r 194 (196)
-||+.|+++..-||.||+.|.
T Consensus 38 ~aA~~LGIsr~tL~rklkk~g 58 (61)
T 1g2h_A 38 KLAQRLGVSHTAIANKLKQYG 58 (61)
T ss_dssp HHHHHTTSCTHHHHHHHHTTT
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 478899999999999999874
No 273
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=47.50 E-value=24 Score=30.61 Aligned_cols=57 Identities=11% Similarity=-0.048 Sum_probs=43.0
Q ss_pred EEEEEcCCCCH--------------HHHHHHHHHHHHhCCCeEEEEEc---ccCC-chHHHHHHHHHhhCCCeEE
Q 029271 55 VGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILP---PHQN-CKEALSYALSAKERGIKII 111 (196)
Q Consensus 55 V~IimGS~SD~--------------~~~~~~~~~l~~~gi~~ev~V~S---aHR~-p~~~~~~~~~~e~~~~~V~ 111 (196)
+.-+..+.||. +.++++.+.+++.|..+.+.+.. ..|. ++.+.++++.+++-|++.|
T Consensus 112 ~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 186 (337)
T 3ble_A 112 VLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERI 186 (337)
T ss_dssp EEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEE
Confidence 44456778886 67778888888999987777655 4454 6888899999999898644
No 274
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=47.42 E-value=57 Score=25.90 Aligned_cols=114 Identities=15% Similarity=0.112 Sum_probs=75.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeE---EEEEcccCCchHHHHHHHHHhhCCCeEEEEec--CCCCchhHh---
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYE---IKILPPHQNCKEALSYALSAKERGIKIIIVGD--GVEAHLSGV--- 124 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~e---v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA--G~sa~L~gv--- 124 (196)
.+++||.+.-.+-.-.+.+.+.|++.|+..+ ++|-++.-.|-...++++ +..++.+||.. |..-|-=-|
T Consensus 3 ~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~---~~~yDavIaLG~VG~T~Hfd~Va~~ 79 (156)
T 2b99_A 3 KKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLE---EEGCDIVMALGMPGKAEKDKVCAHE 79 (156)
T ss_dssp CEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHH---HSCCSEEEEEECCCSSHHHHHHHHH
T ss_pred cEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHh---cCCCCEEEEecccCCcchhHHHHHH
Confidence 4799999988876667889999999999766 577788777766666654 35577777654 333332111
Q ss_pred -------hhhccCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 125 -------AAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 125 -------vA~~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
++-.|..|||...+.+.. ...+ -+.. -..+.+..||..|.+++.+
T Consensus 80 vs~Gl~~v~L~~~vPV~~gt~~~~e-qa~~r~~g~-----------k~~nKG~EaA~aaiem~~l 132 (156)
T 2b99_A 80 ASLGLMLAQLMTNKHIIEVFVHEDE-AKDDKELDW-----------LAKRRAEEHAENVYYLLFK 132 (156)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCGGG-SSSHHHHHH-----------HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhCCCEEEEeCCCHH-HHHHHhhcc-----------hhhhhHHHHHHHHHHHHHH
Confidence 223589999999333211 2233 2211 1237889999999999976
No 275
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=47.37 E-value=93 Score=25.76 Aligned_cols=27 Identities=19% Similarity=0.067 Sum_probs=18.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+++- +...+++.|-+-|.
T Consensus 45 ~gk~~lVTGas~G--IG~aia~~la~~G~ 71 (317)
T 3oec_A 45 QGKVAFITGAARG--QGRTHAVRLAQDGA 71 (317)
T ss_dssp TTCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 4578888888774 45566666666665
No 276
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=47.05 E-value=45 Score=28.76 Aligned_cols=53 Identities=9% Similarity=-0.085 Sum_probs=43.9
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+..|+.|...+ .-+.+--.+.|+++|+ ++.......-+.+++++.++++.++
T Consensus 29 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D 82 (276)
T 3ngx_A 29 SLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKD 82 (276)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHC
T ss_pred cEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCC
Confidence 367777786644 4577788889999999 9999999999999999999988765
No 277
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=47.02 E-value=1.3e+02 Score=25.46 Aligned_cols=85 Identities=11% Similarity=0.061 Sum_probs=49.9
Q ss_pred CCeEEEEEcCCCC----HHHHHHHHHHHHHhCCCeEEEEEcccC----------CchHHHHHHHHHhhCCCeEEEEec--
Q 029271 52 APIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQ----------NCKEALSYALSAKERGIKIIIVGD-- 115 (196)
Q Consensus 52 ~~~V~IimGS~SD----~~~~~~~~~~l~~~gi~~ev~V~SaHR----------~p~~~~~~~~~~e~~~~~V~IavA-- 115 (196)
..+|.||.||... ...++.+.+.+++.|+. +.+..... .++.+.++.+.... ++.||-++
T Consensus 58 ~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~e--veiidL~dlpl~~~d~~~~~d~v~~l~e~I~~--ADgiV~aSP~ 133 (279)
T 2fzv_A 58 PVRILLLYGSLRARSFSRLAVEEAARLLQFFGAE--TRIFDPSDLPLPDQVQSDDHPAVKELRALSEW--SEGQVWCSPE 133 (279)
T ss_dssp CCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCE--EEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHH--CSEEEEEEEE
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCE--EEEEehhcCCCCccCccCCCHHHHHHHHHHHH--CCeEEEEcCc
Confidence 4589999999864 33455666777777874 44444443 34667788877766 54444333
Q ss_pred ---CCCCchhHhhhh----------ccCCcEEEecCCC
Q 029271 116 ---GVEAHLSGVAAA----------NSQILVIRVPLLS 140 (196)
Q Consensus 116 ---G~sa~L~gvvA~----------~t~~PVIgvP~~~ 140 (196)
++++.|=.++-- ...+|+.-+-+.+
T Consensus 134 Yn~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~tsG 171 (279)
T 2fzv_A 134 RHGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSG 171 (279)
T ss_dssp ETTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECS
T ss_pred cccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEECC
Confidence 334444333321 3456776655543
No 278
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=46.50 E-value=33 Score=27.37 Aligned_cols=79 Identities=16% Similarity=0.115 Sum_probs=44.3
Q ss_pred eEEEEEcCCCCH---HHHHHHHHHH----HHhCCCeEEEEEcccCCchHHH--------------HHHHHHhhCCCe-EE
Q 029271 54 IVGIIMESDLDL---PVMNDAARTL----SDFGVPYEIKILPPHQNCKEAL--------------SYALSAKERGIK-II 111 (196)
Q Consensus 54 ~V~IimGS~SD~---~~~~~~~~~l----~~~gi~~ev~V~SaHR~p~~~~--------------~~~~~~e~~~~~-V~ 111 (196)
+++|| |+-+=. ++.+++.+.. +.... .+.+.|-=..|+++. +.++..++.|++ ++
T Consensus 3 ~iGii-GGmg~~at~~~~~~i~~~~~~~~d~~~~--~~~~~~~~~i~~r~~~~~~~~~~~~~~l~~~~~~l~~~g~d~iv 79 (228)
T 1jfl_A 3 TIGIL-GGMGPLATAELFRRIVIKTPAKRDQEHP--KVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFII 79 (228)
T ss_dssp CEEEE-ECSSHHHHHHHHHHHHHTCCCSSGGGSC--CEEEEECTTSCCHHHHHTTSSCCCHHHHHHHHHHHHHHTCSEEE
T ss_pred eEEEe-cccCHHHHHHHHHHHHHHHHhhcCCccC--cEeEEeCCCHHHHHHHHHcCCchHHHHHHHHHHHHHHcCCCEEE
Confidence 58888 455533 3444444432 11223 334444333555544 778888888896 44
Q ss_pred EEecCCCCchhHhhhhccCCcEEEe
Q 029271 112 IVGDGVEAHLSGVAAANSQILVIRV 136 (196)
Q Consensus 112 IavAG~sa~L~gvvA~~t~~PVIgv 136 (196)
|++...+..+. -+...+..||||+
T Consensus 80 iaCnTa~~~~~-~l~~~~~iPvi~i 103 (228)
T 1jfl_A 80 MPCNTAHAFVE-DIRKAIKIPIISM 103 (228)
T ss_dssp CSCTGGGGGHH-HHHHHCSSCBCCH
T ss_pred EcCccHHHHHH-HHHHhCCCCEech
Confidence 55544554433 4455678999985
No 279
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=46.41 E-value=74 Score=25.29 Aligned_cols=26 Identities=15% Similarity=0.073 Sum_probs=15.7
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|.+-|.
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (262)
T 1zem_A 7 GKVCLVTGAGG--NIGLATALRLAEEGT 32 (262)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 46777777766 345555666655553
No 280
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=46.37 E-value=92 Score=24.95 Aligned_cols=26 Identities=8% Similarity=0.148 Sum_probs=16.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+.+.|.+-|.
T Consensus 21 ~k~vlVTGas~--gIG~aia~~l~~~G~ 46 (273)
T 1ae1_A 21 GTTALVTGGSK--GIGYAIVEELAGLGA 46 (273)
T ss_dssp TCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCcc--hHHHHHHHHHHHCCC
Confidence 46778888766 445556666666564
No 281
>3qel_B Glutamate [NMDA] receptor subunit epsilon-2; ION channel, allosteric modulation, phenylethanolamine, N-glycosylation, extracellular; HET: NAG BMA MAN FUC QEL; 2.60A {Rattus norvegicus} PDB: 3qem_B* 3jpw_A* 3jpy_A*
Probab=46.26 E-value=50 Score=28.03 Aligned_cols=84 Identities=11% Similarity=0.103 Sum_probs=41.2
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc---CCchHH-HHHHHHHhhCCCeEEEEecCC-CCchh---Hhh
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---QNCKEA-LSYALSAKERGIKIIIVGDGV-EAHLS---GVA 125 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH---R~p~~~-~~~~~~~e~~~~~V~IavAG~-sa~L~---gvv 125 (196)
-|++|.+++++......+..--+.+..++++.....+ -.|..+ ..+.+.+...++..+|..... +.+++ .-+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~C~~l~~~~V~aiIgg~~s~~~a~a~~v~~i 85 (364)
T 3qel_B 6 GIAVILVGTSDEVAIKDAHEKDDFHHLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFI 85 (364)
T ss_dssp EEEEEEESSCCHHHHTC---------CCSEEEEEEEEECCCSHHHHHHHHHHHHHHSCEEEEEEEESSCCTHHHHHHHHH
T ss_pred EEEEEEcccchhhhhccccCccccccCCccceEEEEEecCCCHHHHHHHHHHHHHhCCeEEEEecCCCCchHHHHHHHHH
Confidence 5999998888833333333333445556666554433 234443 334444444455445543222 12333 235
Q ss_pred hhccCCcEEEec
Q 029271 126 AANSQILVIRVP 137 (196)
Q Consensus 126 A~~t~~PVIgvP 137 (196)
++...+|+|..-
T Consensus 86 ~~~~~iP~IS~~ 97 (364)
T 3qel_B 86 SAQTLTPILGIH 97 (364)
T ss_dssp HHHHTCCEEEEE
T ss_pred HhccCCCEEEee
Confidence 678899999753
No 282
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=46.11 E-value=86 Score=25.26 Aligned_cols=64 Identities=11% Similarity=0.124 Sum_probs=41.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc--------------CCchHHHHHHHHHhh--CCCeEEEEec
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------QNCKEALSYALSAKE--RGIKIIIVGD 115 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH--------------R~p~~~~~~~~~~e~--~~~~V~IavA 115 (196)
..++++|+|+++ -+...+++.|.+-|. ++-+++-. ..++.+.+++++... .+++++|-.|
T Consensus 27 ~gk~vlVTGas~--gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnA 102 (266)
T 3uxy_A 27 EGKVALVTGAAG--GIGGAVVTALRAAGA--RVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNA 102 (266)
T ss_dssp TTCEEEESSTTS--HHHHHHHHHHHHTTC--EEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 468999999998 567788888888885 33332211 122344555554433 2579999999
Q ss_pred CCCC
Q 029271 116 GVEA 119 (196)
Q Consensus 116 G~sa 119 (196)
|...
T Consensus 103 g~~~ 106 (266)
T 3uxy_A 103 GVIS 106 (266)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9753
No 283
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=46.03 E-value=81 Score=25.09 Aligned_cols=26 Identities=19% Similarity=0.217 Sum_probs=15.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+.+ .+...+.+.|-+-|.
T Consensus 12 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 37 (256)
T 3gaf_A 12 DAVAIVTGAAA--GIGRAIAGTFAKAGA 37 (256)
T ss_dssp TCEEEECSCSS--HHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 46777777776 344455555555554
No 284
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=45.92 E-value=89 Score=24.08 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=41.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc-----CCchHHHHHHHHHhhCCCeEEEEecCCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-----QNCKEALSYALSAKERGIKIIIVGDGVE 118 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH-----R~p~~~~~~~~~~e~~~~~V~IavAG~s 118 (196)
.+++++|+|+++ -+...+++.|.+-|. .+.+.+-. ..++.+.++++++ ..++++|-.||..
T Consensus 5 ~~k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~D~~~~~~v~~~~~~~--g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTS--GIGAELAKQLESEHT--IVHVASRQTGLDISDEKSVYHYFETI--GAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTS--HHHHHHHHHHCSTTE--EEEEESGGGTCCTTCHHHHHHHHHHH--CSEEEEEECCCCC
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEecCCcccCCCCHHHHHHHHHHh--CCCCEEEECCCCC
Confidence 468999999988 456777777766664 44444322 2355667777655 3479999999965
No 285
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=45.82 E-value=80 Score=25.52 Aligned_cols=27 Identities=22% Similarity=0.160 Sum_probs=21.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+++ -+...+.+.|.+-|.
T Consensus 15 ~gk~vlVTGas~--gIG~~~a~~L~~~G~ 41 (291)
T 3rd5_A 15 AQRTVVITGANS--GLGAVTARELARRGA 41 (291)
T ss_dssp TTCEEEEECCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 468999999987 456778888877785
No 286
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=45.81 E-value=69 Score=25.83 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=18.7
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+.+ .+...+.+.|.+-|.
T Consensus 26 ~~k~~lVTGas~--GIG~aia~~l~~~G~ 52 (277)
T 4fc7_A 26 RDKVAFITGGGS--GIGFRIAEIFMRHGC 52 (277)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 457888888877 455666666666664
No 287
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=45.67 E-value=1e+02 Score=25.62 Aligned_cols=126 Identities=7% Similarity=-0.006 Sum_probs=78.9
Q ss_pred ccccCCccchhhhhhhhhhhhccccCCCCCccccc----cccc-cc-------cccCCCCeEEEEEcCCCCHHHHHHHHH
Q 029271 6 VNHQLSSRKKTLMVTLQLLRCQIVYVPAACPSTKS----CLPR-FL-------LLAADAPIVGIIMESDLDLPVMNDAAR 73 (196)
Q Consensus 6 ~~~~~~sgdk~l~~dkq~yr~l~~vt~~~~~~vk~----v~~~-~~-------~~~~~~~~V~IimGS~SD~~~~~~~~~ 73 (196)
-+|-|=+=+.....=+.....|.+..|+.-+..++ -..+ +. ...+-..+..|++=.. +. -
T Consensus 118 dPH~Wldp~~~~~~a~~I~~~L~~~dP~~a~~y~~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~a--f~------Y 189 (284)
T 3cx3_A 118 DPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEKATQKTFVTQHTA--FS------Y 189 (284)
T ss_dssp CCCGGGSHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCCCEEEEESC--CH------H
T ss_pred CCCcccCHHHHHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCc--hH------H
Confidence 34556555555555556777777777766543322 1011 11 1111122333333211 22 2
Q ss_pred HHHHhCCCeEEEEEc----ccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcEEEecCCC
Q 029271 74 TLSDFGVPYEIKILP----PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 140 (196)
Q Consensus 74 ~l~~~gi~~ev~V~S----aHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~~ 140 (196)
.++.||+.. +.+.+ .=-+|.++.++++..+++++++|+.=...+.-+.-.+|..+..||+.+.+..
T Consensus 190 f~~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~l~ 259 (284)
T 3cx3_A 190 LAKRFGLNQ-LGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNPLE 259 (284)
T ss_dssp HHHHTTCCE-EEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEECCCSS
T ss_pred HHHHcCCEE-eeccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecCcc
Confidence 346899984 44442 2357899999999999999999999999999999999999999998775543
No 288
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=45.61 E-value=13 Score=35.11 Aligned_cols=47 Identities=26% Similarity=0.261 Sum_probs=32.0
Q ss_pred chHHHHHHHHHhhCCCeEEEEecCCCC-chhHhhhhc-----cCCcEEEecCC
Q 029271 93 CKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAAN-----SQILVIRVPLL 139 (196)
Q Consensus 93 p~~~~~~~~~~e~~~~~V~IavAG~sa-~L~gvvA~~-----t~~PVIgvP~~ 139 (196)
++...++++.+++.+++.+|++.|-.. .-+-.++-. ..+||||||-.
T Consensus 152 ~e~~~~~~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPkT 204 (555)
T 2f48_A 152 EEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKT 204 (555)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEeccc
Confidence 345678889999999988887766532 222233322 27999999964
No 289
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=45.39 E-value=1.1e+02 Score=25.26 Aligned_cols=75 Identities=11% Similarity=-0.108 Sum_probs=49.2
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCC-CeEEEEEcccCCchHH-HHHHHHHhhCCCeEEEEecCCCCc--hhHhh
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGV-PYEIKILPPHQNCKEA-LSYALSAKERGIKIIIVGDGVEAH--LSGVA 125 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi-~~ev~V~SaHR~p~~~-~~~~~~~e~~~~~V~IavAG~sa~--L~gvv 125 (196)
-+|.++..++-|. ...+++++.|+.+|. ++++.-... +.+.+. .++.+..++..-+++|-++|+.-. |+.+.
T Consensus 35 d~ViLv~~~~~~~~~~~A~~~i~~~l~~~~~i~~e~~~vd~-~df~~~v~~i~~~i~~~~~~iivnlsGG~Ril~l~~l~ 113 (244)
T 2wte_A 35 DSLVIVVPSPIVSGTRAAIESLRAQISRLNYPPPRIYEIEI-TDFNLALSKILDIILTLPEPIISDLTMGMRMINTLILL 113 (244)
T ss_dssp SEEEEEEESSCCHHHHHHHHHHHHHHHHHTCCCEEEEEECC-CSHHHHHHHHHHHHTTSCSSEEEECSSSCHHHHHHHHH
T ss_pred CEEEEEeCCCcchhHHHHHHHHHHHHHHcCCCceEEEEECC-ccHHHHHHHHHHHHhhcCCcEEEEecCCchHHHHHHHH
Confidence 3788888876543 556678888888874 888766665 455444 445555555322899988887654 55566
Q ss_pred hhc
Q 029271 126 AAN 128 (196)
Q Consensus 126 A~~ 128 (196)
|..
T Consensus 114 A~~ 116 (244)
T 2wte_A 114 GII 116 (244)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 290
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=45.35 E-value=14 Score=31.49 Aligned_cols=29 Identities=14% Similarity=0.214 Sum_probs=20.4
Q ss_pred CeEEEEecCCCCchhHhhhhccCCcEEEecCCC
Q 029271 108 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 140 (196)
Q Consensus 108 ~~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~~ 140 (196)
++++|+.-.+..|| |+....|+|++--++
T Consensus 262 a~~~i~~DsG~~Hl----Aaa~g~P~v~lfg~t 290 (349)
T 3tov_A 262 CNLLITNDSGPMHV----GISQGVPIVALYGPS 290 (349)
T ss_dssp CSEEEEESSHHHHH----HHTTTCCEEEECSSC
T ss_pred CCEEEECCCCHHHH----HHhcCCCEEEEECCC
Confidence 67888876666666 445688999975444
No 291
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=45.31 E-value=29 Score=27.41 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=26.5
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH 90 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH 90 (196)
.|.+.+- +.=++|++++..|++.|++|+..-..-+
T Consensus 171 ~i~ly~~--~~Cp~C~~a~~~L~~~~i~~~~~~i~~~ 205 (241)
T 1nm3_A 171 SISIFTK--PGCPFCAKAKQLLHDKGLSFEEIILGHD 205 (241)
T ss_dssp CEEEEEC--SSCHHHHHHHHHHHHHTCCCEEEETTTT
T ss_pred eEEEEEC--CCChHHHHHHHHHHHcCCceEEEECCCc
Confidence 4555544 4559999999999999999987655443
No 292
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.16 E-value=33 Score=24.43 Aligned_cols=79 Identities=10% Similarity=0.001 Sum_probs=44.8
Q ss_pred eEEEEEcCCCCHHHHH------HHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 54 IVGIIMESDLDLPVMN------DAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~------~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
+|.|.+- +.=++|+ +++..|++.|++|+..=... .++...++.+.+.. ...-..+
T Consensus 9 ~V~vy~~--~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~--~~~~~~~l~~~~~~---------------~~~~~~g 69 (111)
T 2ct6_A 9 VIRVFIA--SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKNVPP---------------EKKPTQG 69 (111)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT--CHHHHHHHHHSCCT---------------TTCCSSS
T ss_pred EEEEEEc--CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC--CHHHHHHHHHHhcc---------------cccccCC
Confidence 4666653 4456777 99999999999988654443 34443334331100 0000124
Q ss_pred ccCCcEEEecCCCCCCChhh-hhhhhc
Q 029271 128 NSQILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 128 ~t~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
..+.|+|-+ .....+|.| +..+.+
T Consensus 70 ~~tvP~vfi--~g~~iGG~d~l~~l~~ 94 (111)
T 2ct6_A 70 NPLPPQIFN--GDRYCGDYDSFFESKE 94 (111)
T ss_dssp SCCSCEEEE--TTEEEEEHHHHHHHHT
T ss_pred CCCCCEEEE--CCEEEeCHHHHHHHHH
Confidence 567888854 233457777 666554
No 293
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=45.11 E-value=72 Score=25.88 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=36.1
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCC------------------------chHHHHHHHHHhhC-
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN------------------------CKEALSYALSAKER- 106 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~------------------------p~~~~~~~~~~e~~- 106 (196)
..++++|+|+++ .+...+++.|.+-|.. +-+ .-|. ++.+.+++++..++
T Consensus 27 ~~k~~lVTGas~--GIG~aia~~la~~G~~--V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 100 (272)
T 4dyv_A 27 GKKIAIVTGAGS--GVGRAVAVALAGAGYG--VAL--AGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF 100 (272)
T ss_dssp -CCEEEETTTTS--HHHHHHHHHHHHTTCE--EEE--EESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCCE--EEE--EECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 357888888877 4455666666666652 222 2233 34444444444322
Q ss_pred -CCeEEEEecCCC
Q 029271 107 -GIKIIIVGDGVE 118 (196)
Q Consensus 107 -~~~V~IavAG~s 118 (196)
+++++|-.||..
T Consensus 101 g~iD~lVnnAg~~ 113 (272)
T 4dyv_A 101 GRVDVLFNNAGTG 113 (272)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 578999999874
No 294
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=44.96 E-value=1.1e+02 Score=23.78 Aligned_cols=62 Identities=6% Similarity=-0.078 Sum_probs=40.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc---------------CCchHHHHHHHHHhh----CCCeEEEE
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------------QNCKEALSYALSAKE----RGIKIIIV 113 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH---------------R~p~~~~~~~~~~e~----~~~~V~Ia 113 (196)
.++++|+|+++ .+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..+ .+++++|-
T Consensus 3 ~k~vlITGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKG--ALGSAILEFFKKNGY--TVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTS--HHHHHHHHHHHHTTE--EEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 57899999988 567788888888784 44443211 112345555554433 35799999
Q ss_pred ecCCC
Q 029271 114 GDGVE 118 (196)
Q Consensus 114 vAG~s 118 (196)
.||..
T Consensus 79 ~Ag~~ 83 (236)
T 1ooe_A 79 VAGGW 83 (236)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 99954
No 295
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=44.90 E-value=1.4e+02 Score=25.10 Aligned_cols=45 Identities=16% Similarity=0.157 Sum_probs=30.2
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCC---eEEEE-----EcccCCchHHHHHHHHH
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVP---YEIKI-----LPPHQNCKEALSYALSA 103 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~---~ev~V-----~SaHR~p~~~~~~~~~~ 103 (196)
+++||+-|++|++. +.++++||. ..+.+ .+.--+|.++.++.+++
T Consensus 5 ki~IvtDSt~dL~~-----e~~~~~~I~vvPL~v~~~~~~p~TSqps~~~~~~~f~~~ 57 (277)
T 3egl_A 5 PVRVIVDSSACLPT-----HVAEDLDITVINLHVMNNGEERSTSGLSSLELAASYARQ 57 (277)
T ss_dssp CCEEEEEGGGCCCH-----HHHHHTTEEEECCEEEECSSCEEEECCCHHHHHHHHHHH
T ss_pred cEEEEEECCCCCCH-----HHHHHCCeEEEEEEEEECCcccccCCcCHHHHHHHHHHH
Confidence 58999999999984 456778873 33332 34445677777665544
No 296
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=44.83 E-value=20 Score=30.35 Aligned_cols=85 Identities=15% Similarity=0.176 Sum_probs=43.0
Q ss_pred CeEEEEEcCCC--CHHHHHHHHHHHHHhCCCeEEEEEcccCC------ch-------HHHHHHH-HHhhCCCeEEEEecC
Q 029271 53 PIVGIIMESDL--DLPVMNDAARTLSDFGVPYEIKILPPHQN------CK-------EALSYAL-SAKERGIKIIIVGDG 116 (196)
Q Consensus 53 ~~V~IimGS~S--D~~~~~~~~~~l~~~gi~~ev~V~SaHR~------p~-------~~~~~~~-~~e~~~~~V~IavAG 116 (196)
.+|+||.=-.+ -.+..+++.+.|++.|+.+.+.-..+... ++ ....+.+ +...++++++|++.|
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~~GG 84 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVLGG 84 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEEEC
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccccccccccccccCCCEEEEEeC
Confidence 36777764333 35678899999999999766543332111 00 0111111 122345677776544
Q ss_pred CCCchhHhhhh--ccCCcEEEecC
Q 029271 117 VEAHLSGVAAA--NSQILVIRVPL 138 (196)
Q Consensus 117 ~sa~L~gvvA~--~t~~PVIgvP~ 138 (196)
.+.+-.++.. ....||+|++.
T Consensus 85 -DGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 85 -DGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp -HHHHHHHHHHHHHHTCCEEEEEC
T ss_pred -CHHHHHHHHHhccCCCCEEEEeC
Confidence 5544444433 24789999985
No 297
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=44.82 E-value=42 Score=26.69 Aligned_cols=71 Identities=14% Similarity=0.102 Sum_probs=46.1
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
..+|+++.=. +- ...+....+-||++.+.+. -.++++..+.++++.++|++|||+ +.+..=+|-.-.+
T Consensus 94 ~~kIavvg~~-~~---~~~~~~~~~ll~~~i~~~~---~~~~~e~~~~i~~l~~~G~~vvVG-----~~~~~~~A~~~Gl 161 (196)
T 2q5c_A 94 GNELALIAYK-HS---IVDKHEIEAMLGVKIKEFL---FSSEDEITTLISKVKTENIKIVVS-----GKTVTDEAIKQGL 161 (196)
T ss_dssp CSEEEEEEES-SC---SSCHHHHHHHHTCEEEEEE---ECSGGGHHHHHHHHHHTTCCEEEE-----CHHHHHHHHHTTC
T ss_pred CCcEEEEeCc-ch---hhHHHHHHHHhCCceEEEE---eCCHHHHHHHHHHHHHCCCeEEEC-----CHHHHHHHHHcCC
Confidence 3578888632 21 2334555567888655443 378899999999999999999987 2344445555555
Q ss_pred cEE
Q 029271 132 LVI 134 (196)
Q Consensus 132 PVI 134 (196)
|.+
T Consensus 162 ~~v 164 (196)
T 2q5c_A 162 YGE 164 (196)
T ss_dssp EEE
T ss_pred cEE
Confidence 543
No 298
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=44.75 E-value=87 Score=24.69 Aligned_cols=26 Identities=23% Similarity=0.174 Sum_probs=15.6
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|.+-|.
T Consensus 14 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 39 (260)
T 2zat_A 14 NKVALVTASTD--GIGLAIARRLAQDGA 39 (260)
T ss_dssp TCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 46777777766 345555656655553
No 299
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=44.70 E-value=71 Score=25.60 Aligned_cols=65 Identities=12% Similarity=0.091 Sum_probs=36.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc------------------------CCchHHHHHHHHHhhC--
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH------------------------QNCKEALSYALSAKER-- 106 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH------------------------R~p~~~~~~~~~~e~~-- 106 (196)
.++++|+|+++.-.+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..++
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4677888877333456666666666664 33332211 1233444445444332
Q ss_pred CCeEEEEecCCCC
Q 029271 107 GIKIIIVGDGVEA 119 (196)
Q Consensus 107 ~~~V~IavAG~sa 119 (196)
+++++|-.||...
T Consensus 84 ~id~lv~nAg~~~ 96 (275)
T 2pd4_A 84 SLDFIVHSVAFAP 96 (275)
T ss_dssp CEEEEEECCCCCC
T ss_pred CCCEEEECCccCc
Confidence 4689999998653
No 300
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=44.45 E-value=8.6 Score=33.26 Aligned_cols=29 Identities=17% Similarity=0.212 Sum_probs=23.7
Q ss_pred EEEcccCCchHHHHHHHHHhhCCCeEEEE
Q 029271 85 KILPPHQNCKEALSYALSAKERGIKIIIV 113 (196)
Q Consensus 85 ~V~SaHR~p~~~~~~~~~~e~~~~~V~Ia 113 (196)
+|.+-.-+++++.++++++.++|++||+=
T Consensus 68 ~i~~~~Gt~~df~~lv~~aH~~Gi~VilD 96 (496)
T 4gqr_A 68 KLCTRSGNEDEFRNMVTRCNNVGVRIYVD 96 (496)
T ss_dssp CSCBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred eeCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 44555557899999999999999998873
No 301
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=44.35 E-value=1.1e+02 Score=24.15 Aligned_cols=63 Identities=17% Similarity=0.110 Sum_probs=39.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc----------------------CCchHHHHHHHHHhhC--C
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH----------------------QNCKEALSYALSAKER--G 107 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH----------------------R~p~~~~~~~~~~e~~--~ 107 (196)
.+++++|+|+++ -+...+++.|.+-|.. +.+.+-. ..++.+.+++++..++ +
T Consensus 6 ~~k~~lVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (257)
T 3tpc_A 6 KSRVFIVTGASS--GLGAAVTRMLAQEGAT--VLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGH 81 (257)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTCE--EEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 458999999987 4566778888777763 2222111 1234455555544332 5
Q ss_pred CeEEEEecCCC
Q 029271 108 IKIIIVGDGVE 118 (196)
Q Consensus 108 ~~V~IavAG~s 118 (196)
++++|-.||..
T Consensus 82 id~lv~nAg~~ 92 (257)
T 3tpc_A 82 VHGLVNCAGTA 92 (257)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 78999999865
No 302
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=44.19 E-value=61 Score=26.32 Aligned_cols=27 Identities=15% Similarity=0.111 Sum_probs=19.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+.+ .+...+++.|.+-|.
T Consensus 32 ~gk~~lVTGas~--GIG~aia~~la~~G~ 58 (275)
T 4imr_A 32 RGRTALVTGSSR--GIGAAIAEGLAGAGA 58 (275)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 457899999887 455667777777675
No 303
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=44.11 E-value=82 Score=25.64 Aligned_cols=56 Identities=16% Similarity=0.137 Sum_probs=39.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHh-hCCCeEEE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK-ERGIKIII 112 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e-~~~~~V~I 112 (196)
..++++|+|+.+ -+...+.+.|.+-|. .+-+. .+|.++.+.+..++.+ ..+.++.+
T Consensus 8 ~~k~~lVTGas~--GIG~aia~~la~~G~--~V~~~-~~r~~~~~~~~~~~l~~~~~~~~~~ 64 (291)
T 1e7w_A 8 TVPVALVTGAAK--RLGRSIAEGLHAEGY--AVCLH-YHRSAAEANALSATLNARRPNSAIT 64 (291)
T ss_dssp CCCEEEETTCSS--HHHHHHHHHHHHTTC--EEEEE-ESSCHHHHHHHHHHHHHHSTTCEEE
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC--eEEEE-cCCCHHHHHHHHHHHhhhcCCeeEE
Confidence 468999999988 567788888888885 33333 2388888888887775 43444433
No 304
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=44.10 E-value=29 Score=25.42 Aligned_cols=71 Identities=14% Similarity=0.050 Sum_probs=48.7
Q ss_pred eEEEE-EcCCCCHHHHHHHHHHHHHhCCCeE-EEEEcccCCchH-HHHHHHHHhhCCC-eEEEEecCCCCchhHhhhhcc
Q 029271 54 IVGII-MESDLDLPVMNDAARTLSDFGVPYE-IKILPPHQNCKE-ALSYALSAKERGI-KIIIVGDGVEAHLSGVAAANS 129 (196)
Q Consensus 54 ~V~Ii-mGS~SD~~~~~~~~~~l~~~gi~~e-v~V~SaHR~p~~-~~~~~~~~e~~~~-~V~IavAG~sa~L~gvvA~~t 129 (196)
.++|| +||. ...+.++.+.|++-|+.+. +++...+-.|++ +.++++. . .|++.=-+.+++|+..+...+
T Consensus 15 dv~iv~~Gs~--~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~-----~~~vvvvE~~~~G~l~~~i~~~~ 87 (118)
T 3ju3_A 15 DITFVTWGSQ--KGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSS-----ANLVIDVESNYTAQAAQMIKLYT 87 (118)
T ss_dssp SEEEEEEGGG--HHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTT-----CSCCCCCCCCCCCCHHHHHHHHH
T ss_pred CEEEEEECcc--HHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcC-----CCEEEEEECCCCCcHHHHHHHHc
Confidence 45555 5754 6889999999999999876 577777778866 4455432 3 344433445689999998876
Q ss_pred CC
Q 029271 130 QI 131 (196)
Q Consensus 130 ~~ 131 (196)
..
T Consensus 88 ~~ 89 (118)
T 3ju3_A 88 GI 89 (118)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 305
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=44.08 E-value=33 Score=23.90 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=26.3
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP 89 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa 89 (196)
.|.+.+. +.=++|++++..|+++|++|+..-...
T Consensus 20 ~v~vy~~--~~Cp~C~~~~~~L~~~~i~~~~~di~~ 53 (113)
T 3rhb_A 20 TVVIYSK--TWCSYCTEVKTLFKRLGVQPLVVELDQ 53 (113)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEEGGG
T ss_pred CEEEEEC--CCChhHHHHHHHHHHcCCCCeEEEeec
Confidence 4666665 455999999999999999997655443
No 306
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=43.88 E-value=1.2e+02 Score=24.01 Aligned_cols=26 Identities=8% Similarity=0.151 Sum_probs=15.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|.+-|.
T Consensus 9 ~k~vlVTGas~--giG~~ia~~l~~~G~ 34 (260)
T 2ae2_A 9 GCTALVTGGSR--GIGYGIVEELASLGA 34 (260)
T ss_dssp TCEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 46777777766 344455555555553
No 307
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=43.78 E-value=1.1e+02 Score=24.50 Aligned_cols=27 Identities=11% Similarity=-0.100 Sum_probs=19.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ .+...+++.|.+-|.
T Consensus 5 ~~k~~lVTGas~--GIG~aia~~la~~G~ 31 (274)
T 3e03_A 5 SGKTLFITGASR--GIGLAIALRAARDGA 31 (274)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCcEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 357888888876 556667777777775
No 308
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=43.75 E-value=93 Score=24.60 Aligned_cols=24 Identities=8% Similarity=0.018 Sum_probs=13.7
Q ss_pred chHHHHHHHHHhh---CCCeEEEEecC
Q 029271 93 CKEALSYALSAKE---RGIKIIIVGDG 116 (196)
Q Consensus 93 p~~~~~~~~~~e~---~~~~V~IavAG 116 (196)
++.+.+++++..+ ..++++|-.||
T Consensus 66 ~~~v~~~~~~~~~~~~g~id~lvnnAg 92 (260)
T 2qq5_A 66 ESEVRSLFEQVDREQQGRLDVLVNNAY 92 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEEECCc
Confidence 3445555555432 24588888885
No 309
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=43.64 E-value=43 Score=27.59 Aligned_cols=72 Identities=13% Similarity=0.092 Sum_probs=49.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 131 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~ 131 (196)
..+|+|+.=. +- ...+....+-||++.+.+. -.++++.++.++++..+|++|||+ +.+..=+|-.--+
T Consensus 106 ~~kIavVg~~-~~---~~~~~~i~~ll~~~i~~~~---~~~~ee~~~~i~~l~~~G~~vVVG-----~~~~~~~A~~~Gl 173 (225)
T 2pju_A 106 TSSIGVVTYQ-ET---IPALVAFQKTFNLRLDQRS---YITEEDARGQINELKANGTEAVVG-----AGLITDLAEEAGM 173 (225)
T ss_dssp TSCEEEEEES-SC---CHHHHHHHHHHTCCEEEEE---ESSHHHHHHHHHHHHHTTCCEEEE-----SHHHHHHHHHTTS
T ss_pred CCcEEEEeCc-hh---hhHHHHHHHHhCCceEEEE---eCCHHHHHHHHHHHHHCCCCEEEC-----CHHHHHHHHHcCC
Confidence 3578888533 22 3445566678888766653 578899999999999999999987 3344555555666
Q ss_pred cEEE
Q 029271 132 LVIR 135 (196)
Q Consensus 132 PVIg 135 (196)
|.+=
T Consensus 174 ~~vl 177 (225)
T 2pju_A 174 TGIF 177 (225)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6443
No 310
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=43.63 E-value=30 Score=24.41 Aligned_cols=43 Identities=12% Similarity=-0.083 Sum_probs=30.5
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHH
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 100 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~ 100 (196)
.|.|.+ ++.=|+|.++++.|++.||+|+..= .-..|+...++.
T Consensus 5 ~I~vYs--~~~Cp~C~~aK~~L~~~gi~y~~id--i~~d~~~~~~~~ 47 (92)
T 2lqo_A 5 ALTIYT--TSWCGYCLRLKTALTANRIAYDEVD--IEHNRAAAEFVG 47 (92)
T ss_dssp CEEEEE--CTTCSSHHHHHHHHHHTTCCCEEEE--TTTCHHHHHHHH
T ss_pred cEEEEc--CCCCHhHHHHHHHHHhcCCceEEEE--cCCCHHHHHHHH
Confidence 455554 4677999999999999999987543 345666555443
No 311
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=43.60 E-value=89 Score=24.54 Aligned_cols=53 Identities=9% Similarity=-0.013 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecC
Q 029271 64 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 116 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG 116 (196)
|....+++++.|++.|+.+...-....+..+.+.+.++.+..-|++.++...|
T Consensus 61 ~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~ 113 (262)
T 3p6l_A 61 DAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA 113 (262)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC
Confidence 44556667777777776543322233345566666666666666665555554
No 312
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=43.53 E-value=1.2e+02 Score=23.97 Aligned_cols=112 Identities=11% Similarity=-0.013 Sum_probs=63.8
Q ss_pred CCeEEEEEcC-------CCCHHHHHHHHHHHHHhCCCeE-EEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCC----
Q 029271 52 APIVGIIMES-------DLDLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA---- 119 (196)
Q Consensus 52 ~~~V~IimGS-------~SD~~~~~~~~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa---- 119 (196)
..+|+||+=| .-|. ...-++..|+++|+... .++ .--.++.+.+-++++-++ ++++|+-.|.+.
T Consensus 3 ~~~v~IistGdEll~G~i~Dt-N~~~l~~~L~~~G~~v~~~~i--v~Dd~~~I~~~l~~a~~~-~DlVittGG~g~~~~D 78 (172)
T 3kbq_A 3 AKNASVITVGNEILKGRTVNT-NAAFIGNFLTYHGYQVRRGFV--VMDDLDEIGWAFRVALEV-SDLVVSSGGLGPTFDD 78 (172)
T ss_dssp -CEEEEEEECHHHHTTSSCCH-HHHHHHHHHHHTTCEEEEEEE--ECSCHHHHHHHHHHHHHH-CSEEEEESCCSSSTTC
T ss_pred CCEEEEEEEcccccCCcEEeH-HHHHHHHHHHHCCCEEEEEEE--eCCCHHHHHHHHHHHHhc-CCEEEEcCCCcCCccc
Confidence 4578887743 3343 34457788899998643 333 334556666666555443 788888777654
Q ss_pred chhHhhhhccCCcEEEecCCCC----CCChhh----hhhhhcCCCCCeeeEEecCChhhH
Q 029271 120 HLSGVAAANSQILVIRVPLLSE----DWSEDD----VINSIRMPSHVQVASVPRNNAKNA 171 (196)
Q Consensus 120 ~L~gvvA~~t~~PVIgvP~~~~----~~~G~D----LlS~lqmPsGvpvatV~I~~~~nA 171 (196)
..+-+++.....++..-|-.-. .+.|.+ -+-+..+|.| |++ |.|+.+-
T Consensus 79 ~T~ea~a~~~~~~l~~~~e~~~~i~~~~~~~~~~~~~~k~A~~P~g---a~~-l~N~~g~ 134 (172)
T 3kbq_A 79 MTVEGFAKCIGQDLRIDEDALAMIKKKYGQADLTPQRLKMAKIPPS---CRP-IENPVGT 134 (172)
T ss_dssp CHHHHHHHHHTCCCEECHHHHHHHHHHHC---CCHHHHGGGEECTT---EEE-ECCSSSS
T ss_pred chHHHHHHHcCCCeeeCHHHHHHHHHHHcCCCCChHHHhhccCCCC---CEE-CcCCCCc
Confidence 4577777766676665553211 111222 2445555888 333 4666553
No 313
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=43.43 E-value=76 Score=27.62 Aligned_cols=48 Identities=10% Similarity=0.020 Sum_probs=30.1
Q ss_pred cCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHH
Q 029271 129 SQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIR 191 (196)
Q Consensus 129 t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~~d~~l~~kl~ 191 (196)
.+...|++|..... .|.-++.+..-+++..+...++..-+..-+++++
T Consensus 306 ipt~~igvp~~~~H---------------s~~E~~~~~Di~~~~~ll~~~l~~l~~~~~~~~~ 353 (355)
T 3kl9_A 306 VPSTTIGVCARYIH---------------SHQTLYAMDDFLEAQAFLQALVKKLDRSTVDLIK 353 (355)
T ss_dssp CCEEEEEEEEBSCS---------------SSCEEEEHHHHHHHHHHHHHHHHTCCHHHHHHHT
T ss_pred CCEEEEccCcCCCC---------------CcceEeeHHHHHHHHHHHHHHHHHhCHHHHHHHh
Confidence 45557788876421 2445666678888887777777666665555543
No 314
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=43.43 E-value=1.2e+02 Score=24.18 Aligned_cols=26 Identities=19% Similarity=0.031 Sum_probs=17.0
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+++.|-+-|.
T Consensus 13 gk~vlVTGas~--gIG~~ia~~l~~~G~ 38 (278)
T 3sx2_A 13 GKVAFITGAAR--GQGRAHAVRLAADGA 38 (278)
T ss_dssp TCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCC
Confidence 56888888776 344556666666664
No 315
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=43.34 E-value=87 Score=25.12 Aligned_cols=12 Identities=17% Similarity=0.473 Sum_probs=9.4
Q ss_pred CCeEEEEecCCC
Q 029271 107 GIKIIIVGDGVE 118 (196)
Q Consensus 107 ~~~V~IavAG~s 118 (196)
+++++|-.||..
T Consensus 86 ~iD~lv~nAg~~ 97 (280)
T 1xkq_A 86 KIDVLVNNAGAA 97 (280)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 468899888864
No 316
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=42.87 E-value=98 Score=24.04 Aligned_cols=27 Identities=15% Similarity=0.347 Sum_probs=15.4
Q ss_pred CchHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 92 NCKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 92 ~p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
.++.+.+++++..+. .++++|-.||..
T Consensus 65 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 65 DIESIQNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 445555555555432 357777777754
No 317
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=42.86 E-value=63 Score=26.36 Aligned_cols=83 Identities=8% Similarity=-0.012 Sum_probs=49.5
Q ss_pred CCeEEEEEcCCCCH--HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh--
Q 029271 52 APIVGIIMESDLDL--PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 127 (196)
Q Consensus 52 ~~~V~IimGS~SD~--~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~-- 127 (196)
-.+|++|.+..+|. ...+...+.|++.|++..... ...........+++....+.++|++.+... ...+++-.
T Consensus 149 ~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~--~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~-~a~~~~~~~~ 225 (366)
T 3td9_A 149 AKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVF--FRSGDQDFSAQLSVAMSFNPDAIYITGYYP-EIALISRQAR 225 (366)
T ss_dssp CCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEE--ECTTCCCCHHHHHHHHHTCCSEEEECSCHH-HHHHHHHHHH
T ss_pred CcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEE--eCCCCccHHHHHHHHHhcCCCEEEEccchh-HHHHHHHHHH
Confidence 45899998755554 345667788899999754443 223344455566667677788777743322 22233322
Q ss_pred --ccCCcEEEec
Q 029271 128 --NSQILVIRVP 137 (196)
Q Consensus 128 --~t~~PVIgvP 137 (196)
....|+|+..
T Consensus 226 ~~g~~~~~~~~~ 237 (366)
T 3td9_A 226 QLGFTGYILAGD 237 (366)
T ss_dssp HTTCCSEEEECG
T ss_pred HcCCCceEEeeC
Confidence 2357888753
No 318
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=42.79 E-value=1.5e+02 Score=24.90 Aligned_cols=127 Identities=10% Similarity=0.008 Sum_probs=64.7
Q ss_pred CCeEEEEEcCCC---CHHHHHHHHHHHHHhCCCeEEEEEcc-----cCCchH--------HHHHHHHHhhCCCeEEEEec
Q 029271 52 APIVGIIMESDL---DLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKE--------ALSYALSAKERGIKIIIVGD 115 (196)
Q Consensus 52 ~~~V~IimGS~S---D~~~~~~~~~~l~~~gi~~ev~V~Sa-----HR~p~~--------~~~~~~~~e~~~~~V~IavA 115 (196)
.+.|.|..||.. .....+++.+.|+.+++.+-+. ++- .+.|+. ..+++ ..+++||+=+
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~-~g~~~~~~~~~~~~v~~~~~~~~~~ll-----~~~d~~v~~~ 310 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILS-RGWTELVLPDDRDDCFAIDEVNFQALF-----RRVAAVIHHG 310 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEE-CTTTTCCCSCCCTTEEEESSCCHHHHG-----GGSSEEEECC
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEE-eCCccccccCCCCCEEEeccCChHHHh-----ccCCEEEecC
Confidence 345666667764 2455777888888887643221 111 011111 12222 2378999966
Q ss_pred CCCCchhHhhhh-ccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecC-ChhhHHHHHHHHHccCCHHHHHHHHHH
Q 029271 116 GVEAHLSGVAAA-NSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGIADEDLLERIRKY 193 (196)
Q Consensus 116 G~sa~L~gvvA~-~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~-~~~nAA~~AaqILa~~d~~l~~kl~~~ 193 (196)
|.. ++.-+ ..-.|+|.+|... +..... ....+ .|+++ + +. ...++..++..|-.+.|+..+++.+..
T Consensus 311 G~~----t~~Ea~~~G~P~i~~p~~~-dQ~~na-~~l~~--~g~g~--~-~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~ 379 (416)
T 1rrv_A 311 SAG----TEHVATRAGVPQLVIPRNT-DQPYFA-GRVAA--LGIGV--A-HDGPTPTFESLSAALTTVLAPETRARAEAV 379 (416)
T ss_dssp CHH----HHHHHHHHTCCEEECCCSB-THHHHH-HHHHH--HTSEE--E-CSSSCCCHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred Chh----HHHHHHHcCCCEEEccCCC-CcHHHH-HHHHH--CCCcc--C-CCCCCCCHHHHHHHHHHhhCHHHHHHHHHH
Confidence 632 33322 3568999999843 211111 11122 35433 2 22 223444444444444788888888765
Q ss_pred Hh
Q 029271 194 VE 195 (196)
Q Consensus 194 r~ 195 (196)
++
T Consensus 380 ~~ 381 (416)
T 1rrv_A 380 AG 381 (416)
T ss_dssp TT
T ss_pred HH
Confidence 43
No 319
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.71 E-value=1.1e+02 Score=23.32 Aligned_cols=65 Identities=14% Similarity=0.055 Sum_probs=37.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc----------------------cCCchHHHHHHHHHhhC----
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP----------------------HQNCKEALSYALSAKER---- 106 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa----------------------HR~p~~~~~~~~~~e~~---- 106 (196)
.++++|+|+++ .+...+.+.|.+.|-.+.+.+.+- -..++.+.+++++..++
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 35778888876 456667777766663233333221 01234455555544332
Q ss_pred CCeEEEEecCCCC
Q 029271 107 GIKIIIVGDGVEA 119 (196)
Q Consensus 107 ~~~V~IavAG~sa 119 (196)
+++++|-.||...
T Consensus 81 ~id~li~~Ag~~~ 93 (250)
T 1yo6_A 81 GLSLLINNAGVLL 93 (250)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCcccC
Confidence 5899999988654
No 320
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=42.59 E-value=1.4e+02 Score=24.39 Aligned_cols=114 Identities=13% Similarity=0.144 Sum_probs=67.4
Q ss_pred CCeEEEEEcCCCC--HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCC--CCchhHh--h
Q 029271 52 APIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV--EAHLSGV--A 125 (196)
Q Consensus 52 ~~~V~IimGS~SD--~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~--sa~L~gv--v 125 (196)
..+|+|+..+..+ ....+.+++.++++|+.+.. . .-...+++.+..+....+ .+++.+.... .++...+ +
T Consensus 140 ~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~--~-~~~~~~~~~~~~~~l~~~-~d~i~~~~d~~~~~~~~~i~~~ 215 (302)
T 3lkv_A 140 VKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVE--A-TALKSADVQSATQAIAEK-SDVIYALIDNTVASAIEGMIVA 215 (302)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEE--E-ECSSGGGHHHHHHHHHTT-CSEEEECSCHHHHHTHHHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEE--E-ecCChHHHHHHHHhccCC-eeEEEEeCCcchhhHHHHHHHH
Confidence 4589998866433 34567788888999986432 2 223456666666655443 5555543221 1122222 3
Q ss_pred hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecC---ChhhHHHHHHHHHccCC
Q 029271 126 AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN---NAKNAALYAVKVLGIAD 183 (196)
Q Consensus 126 A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~---~~~nAA~~AaqILa~~d 183 (196)
+.....||++. + -+++. .|. +++++++ -|.-||.+|.+||.=.+
T Consensus 216 ~~~~~iPv~~~------~-----~~~v~--~G~-l~~~~~~~~~~G~~aa~~a~~IL~G~~ 262 (302)
T 3lkv_A 216 ANQAKTPVFGA------A-----TSYVE--RGA-IASLGFDYYQIGVQTADYVAAILEGKE 262 (302)
T ss_dssp HHHTTCCEEES------S-----HHHHH--TTC-SEEEECCHHHHHHHHHHHHHHHHTTCC
T ss_pred HhhcCCceeec------c-----ccccc--CCc-eEEEecCHHHHHHHHHHHHHHHHCcCC
Confidence 44678899862 1 12333 553 6777777 46789999999996443
No 321
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=42.58 E-value=1e+02 Score=24.71 Aligned_cols=63 Identities=16% Similarity=0.079 Sum_probs=42.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc----------------cCCchHHHHHHHHHhhC--CCeEEEE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP----------------HQNCKEALSYALSAKER--GIKIIIV 113 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa----------------HR~p~~~~~~~~~~e~~--~~~V~Ia 113 (196)
..++++|+|+++ -+...+.+.|.+-|.. +.+.+- -..++.+.+++++..++ +++++|-
T Consensus 27 ~~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 27 QQKVVVITGASQ--GIGAGLVRAYRDRNYR--VVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TCCEEEESSCSS--HHHHHHHHHHHHTTCE--EEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 468999999987 5567788888877864 333321 12345666666655433 6799999
Q ss_pred ecCCC
Q 029271 114 GDGVE 118 (196)
Q Consensus 114 vAG~s 118 (196)
.||..
T Consensus 103 nAg~~ 107 (260)
T 3un1_A 103 NAGVF 107 (260)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99974
No 322
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=42.40 E-value=69 Score=25.30 Aligned_cols=29 Identities=17% Similarity=0.124 Sum_probs=19.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|++|+-.+...+++.|-+.|.
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~ 47 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGA 47 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCC
Confidence 45788888888544456667777766664
No 323
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=42.28 E-value=1e+02 Score=24.31 Aligned_cols=66 Identities=18% Similarity=0.026 Sum_probs=38.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc--------------------------ccCCchHHHHHHHHHhh
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP--------------------------PHQNCKEALSYALSAKE 105 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S--------------------------aHR~p~~~~~~~~~~e~ 105 (196)
..++++|+|+.+.-.+...+++.|.+-|.. +-+.+ =-..++.+.+++++..+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGAR--LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 357888888875544566666666666653 22221 11234555666655543
Q ss_pred C--CCeEEEEecCCCC
Q 029271 106 R--GIKIIIVGDGVEA 119 (196)
Q Consensus 106 ~--~~~V~IavAG~sa 119 (196)
+ .++++|-.||...
T Consensus 84 ~~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 84 QVGVIHGIAHCIAFAN 99 (266)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HhCCeeEEEEcccccc
Confidence 2 4688888888654
No 324
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=42.25 E-value=8.3 Score=32.39 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=48.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc-----CCchHHH----HHHHHHhhCCCe-EEEEecCCCC-ch
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-----QNCKEAL----SYALSAKERGIK-IIIVGDGVEA-HL 121 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH-----R~p~~~~----~~~~~~e~~~~~-V~IavAG~sa-~L 121 (196)
..|+|+=.+---+.+.+++.+.+-.-.+-| ---++| |+.+++. +.++.+++.|++ ++|++-..++ +|
T Consensus 8 ~~IgvfDSGvGGltv~~~i~~~lP~~~~iy--~~D~~~~PyG~~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas~~~l 85 (276)
T 2dwu_A 8 SVIGVLDSGVGGLTVASEIIRQLPKESICY--IGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAAAATL 85 (276)
T ss_dssp CEEEEEESSSTTHHHHHHHHHHCTTSCEEE--EECGGGCCCTTSCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHHHHHH
T ss_pred CeEEEEeCCcchHHHHHHHHHhCCCCcEEE--ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHHHHHH
Confidence 369999666778899999888764333211 011122 5555444 455566777886 5555544442 45
Q ss_pred hHhhhhccCCcEEEe
Q 029271 122 SGVAAANSQILVIRV 136 (196)
Q Consensus 122 ~gvvA~~t~~PVIgv 136 (196)
.-+ ......||||+
T Consensus 86 ~~l-r~~~~iPVigi 99 (276)
T 2dwu_A 86 AAL-QEALSIPVIGV 99 (276)
T ss_dssp HHH-HHHCSSCEEES
T ss_pred HHH-HHHCCCCEEec
Confidence 443 44568999995
No 325
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=42.25 E-value=53 Score=28.36 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=44.5
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+++|+.|...+ .-+.+--.+.|+++|+.++..-....-+.+++++.++++.++
T Consensus 34 ~Lavilvg~dpas~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~i~~lN~D 88 (281)
T 2c2x_A 34 GLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNAN 88 (281)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred eEEEEEeCCChhhHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 467777786654 446667788899999999999999999999999999998765
No 326
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=42.24 E-value=1.2e+02 Score=24.14 Aligned_cols=63 Identities=17% Similarity=0.200 Sum_probs=42.3
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc--------------CCchHHHHHHHHHhhC--CCeEEEEec
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------QNCKEALSYALSAKER--GIKIIIVGD 115 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH--------------R~p~~~~~~~~~~e~~--~~~V~IavA 115 (196)
..++++|+|+++ -+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..++ +++++|-.|
T Consensus 7 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~A 82 (264)
T 2dtx_A 7 RDKVVIVTGASM--GIGRAIAERFVDEGS--KVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNA 82 (264)
T ss_dssp TTCEEEEESCSS--HHHHHHHHHHHHTTC--EEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 357899999987 567788888888785 33333211 2345666666655432 579999999
Q ss_pred CCC
Q 029271 116 GVE 118 (196)
Q Consensus 116 G~s 118 (196)
|..
T Consensus 83 g~~ 85 (264)
T 2dtx_A 83 GIE 85 (264)
T ss_dssp CCC
T ss_pred CCC
Confidence 964
No 327
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=42.05 E-value=17 Score=30.30 Aligned_cols=63 Identities=13% Similarity=0.160 Sum_probs=38.5
Q ss_pred eEEEEEcCC-CCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhc----
Q 029271 54 IVGIIMESD-LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN---- 128 (196)
Q Consensus 54 ~V~IimGS~-SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~---- 128 (196)
+++|+.-.+ .-.+..+++.+.|++.|+.++ .++++++|++.| .+.+-.++...
T Consensus 2 ki~ii~n~~~~~~~~~~~l~~~l~~~g~~v~---------------------~~~~D~vv~lGG-DGT~l~aa~~~~~~~ 59 (272)
T 2i2c_A 2 KYMITSKGDEKSDLLRLNMIAGFGEYDMEYD---------------------DVEPEIVISIGG-DGTFLSAFHQYEERL 59 (272)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSSCEEC---------------------SSSCSEEEEEES-HHHHHHHHHHTGGGT
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHCCCEeC---------------------CCCCCEEEEEcC-cHHHHHHHHHHhhcC
Confidence 456665421 123556677777888888652 245787777655 44444444333
Q ss_pred cCCcEEEecC
Q 029271 129 SQILVIRVPL 138 (196)
Q Consensus 129 t~~PVIgvP~ 138 (196)
...|++|+|+
T Consensus 60 ~~~PilGIn~ 69 (272)
T 2i2c_A 60 DEIAFIGIHT 69 (272)
T ss_dssp TTCEEEEEES
T ss_pred CCCCEEEEeC
Confidence 3789999986
No 328
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=41.97 E-value=43 Score=27.32 Aligned_cols=43 Identities=16% Similarity=0.088 Sum_probs=25.1
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHH
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 100 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~ 100 (196)
..++++|+|+++ .+...+++.|.+-|.. +-+ ..|.++.+.+..
T Consensus 32 ~gk~~lVTGas~--GIG~aia~~la~~G~~--V~~--~~r~~~~~~~~~ 74 (281)
T 4dry_A 32 EGRIALVTGGGT--GVGRGIAQALSAEGYS--VVI--TGRRPDVLDAAA 74 (281)
T ss_dssp --CEEEETTTTS--HHHHHHHHHHHHTTCE--EEE--EESCHHHHHHHH
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEE--EECCHHHHHHHH
Confidence 457889999887 4566777777777752 222 344544444433
No 329
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=41.93 E-value=99 Score=23.73 Aligned_cols=81 Identities=10% Similarity=-0.027 Sum_probs=48.1
Q ss_pred eEEEEEcCCCC----HHHHHHHHHH-HHHhCCCeEEEEEcccCC-----------chHHHHHHHHHhhCCCe-EEEEecC
Q 029271 54 IVGIIMESDLD----LPVMNDAART-LSDFGVPYEIKILPPHQN-----------CKEALSYALSAKERGIK-IIIVGDG 116 (196)
Q Consensus 54 ~V~IimGS~SD----~~~~~~~~~~-l~~~gi~~ev~V~SaHR~-----------p~~~~~~~~~~e~~~~~-V~IavAG 116 (196)
+|.||.||..- ...++.+.+. |++-|. ++.+...... ++.+.++.++.++ ++ +||+.--
T Consensus 4 kilii~gS~r~~g~t~~la~~i~~~~l~~~g~--~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~--aD~ii~~sP~ 79 (197)
T 2vzf_A 4 SIVAISGSPSRNSTTAKLAEYALAHVLARSDS--QGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCN--ADGLIVATPI 79 (197)
T ss_dssp EEEEEECCSSTTCHHHHHHHHHHHHHHHHSSE--EEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHH--CSEEEEEEEC
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHHCCC--eEEEEEccccCchhhcccccCcHHHHHHHHHHHH--CCEEEEEeCc
Confidence 69999999642 3344555555 665575 4555555544 3567777766655 43 5555544
Q ss_pred CCCchhHhhh---------hccCCcEEEecC
Q 029271 117 VEAHLSGVAA---------ANSQILVIRVPL 138 (196)
Q Consensus 117 ~sa~L~gvvA---------~~t~~PVIgvP~ 138 (196)
-.+++|+.+- ....+||.-+-+
T Consensus 80 y~~~~p~~lK~~ld~l~~~~~~gK~~~~~~t 110 (197)
T 2vzf_A 80 YKASYTGLLKAFLDILPQFALAGKAALPLAT 110 (197)
T ss_dssp BTTBCCHHHHHHHTTSCTTTTTTCEEEEEEE
T ss_pred cCCCCCHHHHHHHHhccccccCCCEEEEEEE
Confidence 5666777642 234577776555
No 330
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=41.89 E-value=1.2e+02 Score=24.30 Aligned_cols=26 Identities=19% Similarity=0.156 Sum_probs=17.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+++.|.+-|.
T Consensus 27 ~k~~lVTGas~--GIG~aia~~la~~G~ 52 (267)
T 3u5t_A 27 NKVAIVTGASR--GIGAAIAARLASDGF 52 (267)
T ss_dssp CCEEEEESCSS--HHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 46788888777 445566666666664
No 331
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=41.89 E-value=82 Score=25.17 Aligned_cols=26 Identities=15% Similarity=0.142 Sum_probs=16.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
+++++|+|+.+- +...+.+.|.+-|.
T Consensus 10 ~k~~lVTGas~g--IG~aia~~l~~~G~ 35 (267)
T 3t4x_A 10 GKTALVTGSTAG--IGKAIATSLVAEGA 35 (267)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 467778887763 44556666665564
No 332
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=41.73 E-value=93 Score=25.17 Aligned_cols=40 Identities=18% Similarity=0.056 Sum_probs=23.3
Q ss_pred HHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcEEEec
Q 029271 98 SYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 137 (196)
Q Consensus 98 ~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIgvP 137 (196)
++.+..++...+++++-.+..+..+..++-....|+|-..
T Consensus 87 ~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 126 (364)
T 1f0k_A 87 QARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHE 126 (364)
T ss_dssp HHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEEEEe
Confidence 3444444556899988755433333444445678888543
No 333
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=41.61 E-value=80 Score=24.91 Aligned_cols=117 Identities=20% Similarity=0.203 Sum_probs=74.5
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCC----eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEec----CCCCc
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVP----YEIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAH 120 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~----~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA----G~sa~ 120 (196)
..+++|+.+.-.+. .-.+.+.+.|++.|+. ..++|-++.-.|-...++++ +..++.+||.. |..-|
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG~VIrG~T~H 88 (154)
T 1rvv_A 12 GLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAE---TKKYDAIITLGTVIRGATTH 88 (154)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEEEEECCSSSH
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEeeeeecCCchH
Confidence 35899999998888 7788899999999986 24688888777766665543 34578777644 55555
Q ss_pred hhHhh----------hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 121 LSGVA----------AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 121 L~gvv----------A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
-=-|. +-.|..||+..=....+. ..-+. + .| +-.-+.+..||..|.+++.+
T Consensus 89 fd~V~~~vs~Gl~~v~l~~~vPV~~GVLT~~~~--eQA~~--R--ag----~~~~nkG~eaA~aalem~~l 149 (154)
T 1rvv_A 89 YDYVCNEAAKGIAQAANTTGVPVIFGIVTTENI--EQAIE--R--AG----TKAGNKGVDCAVSAIEMANL 149 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCEEEEEEEESSH--HHHHH--T--EE----ETTEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCCCEEEEecCCCCH--HHHHH--H--hc----ccccchHHHHHHHHHHHHHH
Confidence 43222 224778888763322111 00111 1 11 11126788999999998865
No 334
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=41.46 E-value=69 Score=26.67 Aligned_cols=30 Identities=17% Similarity=-0.085 Sum_probs=24.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCe
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPY 82 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ 82 (196)
.++++|+|..++-.+...+++.|-+-|...
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~V 31 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKI 31 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEE
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEE
Confidence 479999998887778889999998888643
No 335
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=41.31 E-value=40 Score=26.00 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHH
Q 029271 65 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 101 (196)
Q Consensus 65 ~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~ 101 (196)
-+.+++++-.|++.|++||..............+|.+
T Consensus 12 Sp~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~ 48 (228)
T 4hi7_A 12 SPPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLK 48 (228)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHH
T ss_pred ChHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHH
Confidence 3889999999999999999887766554444445544
No 336
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=41.31 E-value=79 Score=27.64 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=45.1
Q ss_pred CeEEEEEcCCCCH-HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~SD~-~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+++|+.|.+.+- -+.+--.+.|++.|+.++..-.+..-+.+++++.++++.++
T Consensus 55 ~LavIlVG~dpaS~~Yv~~K~k~c~~vGi~s~~~~lp~~~se~ell~~I~~LN~D 109 (303)
T 4b4u_A 55 ILATILVGDDGASATYVRMKGNACRRVGMDSLKIELPQETTTEQLLAEIEKLNAN 109 (303)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTC
T ss_pred cEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEecCccCCHHHHHHHHHHhcCC
Confidence 4788888887654 45667778999999999999999999999999999998765
No 337
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=41.20 E-value=1.1e+02 Score=24.30 Aligned_cols=26 Identities=12% Similarity=0.043 Sum_probs=15.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+++.|-+-|.
T Consensus 26 ~k~vlITGas~--gIG~a~a~~l~~~G~ 51 (272)
T 4e3z_A 26 TPVVLVTGGSR--GIGAAVCRLAARQGW 51 (272)
T ss_dssp SCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 45777777766 345556666666564
No 338
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=41.16 E-value=1.2e+02 Score=23.36 Aligned_cols=124 Identities=10% Similarity=-0.075 Sum_probs=62.8
Q ss_pred ccccCCCCeEEEEEcCCCCHHH---HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHh--hC-CCeEEEEecCCCC
Q 029271 46 LLLAADAPIVGIIMESDLDLPV---MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK--ER-GIKIIIVGDGVEA 119 (196)
Q Consensus 46 ~~~~~~~~~V~IimGS~SD~~~---~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e--~~-~~~V~IavAG~sa 119 (196)
++......+|+++.|...+... .+-..+.|++.|++.+... ....+++...+.++++- .. ..+.|++....
T Consensus 114 ~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~~d~-- 190 (272)
T 3o74_A 114 SLLSSAPRSIALIGARPELSVSQARAGGFDEALQGYTGEVRRYQ-GEAFSRECGQRLMQQLIDDLGGLPDALVTTSYV-- 190 (272)
T ss_dssp HHHTTCCSEEEEEEECTTSHHHHHHHHHHHHHTTTCCSEEEEEE-ESSSSHHHHHHHHHHHHHHHTSCCSEEEESSHH--
T ss_pred HHHHCCCcEEEEEecCCCCccHHHHHHHHHHHHHHcCCChheee-cCCCCHHHHHHHHHHHHhcCCCCCcEEEEeCch--
Confidence 3334444589999987665433 3455566678888765433 34445555444444332 22 36788775432
Q ss_pred chhHhhhhccCCcEEEecCCCCCCChhh-h-hhhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 029271 120 HLSGVAAANSQILVIRVPLLSEDWSEDD-V-INSIRMPSHVQVASVPRNNAKNAALYAVKVL 179 (196)
Q Consensus 120 ~L~gvvA~~t~~PVIgvP~~~~~~~G~D-L-lS~lqmPsGvpvatV~I~~~~nAA~~AaqIL 179 (196)
..-|++.+....=. +|-.- ..-|+| . ++....| +.+||.. +++.-|..|+++|
T Consensus 191 ~a~g~~~al~~~g~--vp~di-~vvg~d~~~~~~~~~p---~lttv~~-~~~~~g~~a~~~l 245 (272)
T 3o74_A 191 LLQGVFDTLQARPV--DSRQL-QLGTFGDNQLLDFLPL---PVNAMAQ-QHGQIAATALELA 245 (272)
T ss_dssp HHHHHHHHHHTSCG--GGCCC-EEEEESCCGGGGTSSS---CEEEEEC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC--Cccce-EEEEeCChHHHHhcCC---CceEEEe-CHHHHHHHHHHHH
Confidence 22344444443322 33221 234444 2 2222223 3678854 4555555555544
No 339
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=40.96 E-value=10 Score=31.74 Aligned_cols=80 Identities=21% Similarity=0.173 Sum_probs=48.9
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-----cCCchH----HHHHHHHHhh-CCCe-EEEEecCCCC-ch
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKE----ALSYALSAKE-RGIK-IIIVGDGVEA-HL 121 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa-----HR~p~~----~~~~~~~~e~-~~~~-V~IavAG~sa-~L 121 (196)
.|+|+=.+---+.+.+++.+.+-...+-| ---.+ -|+.++ +.+.++.+++ .|++ ++||+-..++ +|
T Consensus 5 ~IgvfDSGvGGltv~~~i~~~lP~~~~iy--~~D~~~~PyG~~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas~~~l 82 (272)
T 1zuw_A 5 PIGVIDSGVGGLTVAKEIMRQLPKENIIY--VGDTKRCPYGPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTATAIAL 82 (272)
T ss_dssp CEEEEESSSTTHHHHHHHHHHSTTCCEEE--EECGGGCCCSSSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHHHHHH
T ss_pred eEEEEeCCcchHHHHHHHHHhCCCCcEEE--eccCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhhHHHH
Confidence 59999666677899999888764332110 00111 144444 4455566677 8896 6666666654 34
Q ss_pred hHhhhhccCCcEEEe
Q 029271 122 SGVAAANSQILVIRV 136 (196)
Q Consensus 122 ~gvvA~~t~~PVIgv 136 (196)
. -+......||||+
T Consensus 83 ~-~lr~~~~iPVigi 96 (272)
T 1zuw_A 83 D-DIQRSVGIPVVGV 96 (272)
T ss_dssp H-HHHHHCSSCEEES
T ss_pred H-HHHHHCCCCEEcc
Confidence 4 4445678999994
No 340
>1fui_A L-fucose isomerase; ketol isomerase, fucose metabolism, L-fucose to L conversion; HET: FOC; 2.50A {Escherichia coli} SCOP: b.43.2.1 c.85.1.1
Probab=40.81 E-value=2.4e+02 Score=26.72 Aligned_cols=111 Identities=13% Similarity=0.009 Sum_probs=62.8
Q ss_pred CCeEEEEEcCCCC----HHHHH--------HHHHHH-HHh----CCCeEEEE-EcccCCchHHHHHHHHHhhCCCeEEEE
Q 029271 52 APIVGIIMESDLD----LPVMN--------DAARTL-SDF----GVPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIV 113 (196)
Q Consensus 52 ~~~V~IimGS~SD----~~~~~--------~~~~~l-~~~----gi~~ev~V-~SaHR~p~~~~~~~~~~e~~~~~V~Ia 113 (196)
.++|+|+.-+.-- .+..+ +.++.+ +.+ |.|+++-. -+.--+.++.....+.....+++.+|+
T Consensus 6 ~~kiGi~p~~~gr~~~~r~~l~~~~~~~~~~~~~~i~~~L~~~~~~pvevV~~~~~i~~~~~a~~~~e~f~~~~vd~vi~ 85 (591)
T 1fui_A 6 LPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTIT 85 (591)
T ss_dssp CCEEEEEEBCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHCBCTTSCBCCEEECSSCBCSHHHHHHHHHHHHTTTEEEEEE
T ss_pred CceEEEEeccccccccchhchhHHHHHHHHHHHHHHHHHHhhcCCCCeEEEECCCccCCHHHHHHHHHHhhccCCCEEEE
Confidence 4689999886655 23332 222223 344 26677655 335555666677788888888887776
Q ss_pred ecCCCCchhHhhhhcc-CCcEEEecCCCCCCChhh-hhhhhcC--CCCCeeeEE
Q 029271 114 GDGVEAHLSGVAAANS-QILVIRVPLLSEDWSEDD-VINSIRM--PSHVQVASV 163 (196)
Q Consensus 114 vAG~sa~L~gvvA~~t-~~PVIgvP~~~~~~~G~D-LlS~lqm--PsGvpvatV 163 (196)
.-.-=+-=.-.+ -.. ..||+-.........|.+ +.+.+.. =-|+|...+
T Consensus 86 ~~~tf~~~~e~l-~~~~~~Pvli~~~~~~~~pg~v~l~a~~aa~~~~Gip~~~i 138 (591)
T 1fui_A 86 VTPCWCYGSETI-DMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSI 138 (591)
T ss_dssp EESSCCCHHHHS-CCCSSSCEEEEECBCSSSBHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EcCcCCchHHHH-HhcCCCCEEEeCCCCCCCCchHHHHHHHHHHHhcCCCeEEE
Confidence 555211100222 233 788887765555566766 5554321 257776554
No 341
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=40.71 E-value=96 Score=24.64 Aligned_cols=27 Identities=11% Similarity=0.192 Sum_probs=17.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+++ .+...+++.|-+-|.
T Consensus 11 ~~k~vlITGas~--GIG~~~a~~L~~~G~ 37 (311)
T 3o26_A 11 KRRCAVVTGGNK--GIGFEICKQLSSNGI 37 (311)
T ss_dssp -CCEEEESSCSS--HHHHHHHHHHHHTTC
T ss_pred CCcEEEEecCCc--hHHHHHHHHHHHCCC
Confidence 357888888876 345566666665564
No 342
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=40.48 E-value=96 Score=22.70 Aligned_cols=49 Identities=16% Similarity=0.278 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh--CCCeEEEEecC
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDG 116 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~--~~~~V~IavAG 116 (196)
.|....+++++..+.-++ ++|- -++-+++.+|++++.+ ..++|+|-+..
T Consensus 10 ndkklieearkmaekanl--elrt---vktedelkkyleefrkesqnikvlilvsn 60 (110)
T 2kpo_A 10 NDKKLIEEARKMAEKANL--ELRT---VKTEDELKKYLEEFRKESQNIKVLILVSN 60 (110)
T ss_dssp SCHHHHHHHHHHHHHHTC--EEEE---CCSHHHHHHHHHHHTSSTTSEEEEEEESS
T ss_pred CcHHHHHHHHHHHHhcCc--eeee---eccHHHHHHHHHHHHhhccCeEEEEEEcC
Confidence 689999999999998877 5663 4788999999999864 45688887754
No 343
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=40.44 E-value=1.3e+02 Score=23.68 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=15.8
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
++.+.+++++..++ +++++|-.||..
T Consensus 63 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 90 (256)
T 1geg_A 63 RDQVFAAVEQARKTLGGFDVIVNNAGVA 90 (256)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 44555555544332 568999888864
No 344
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=40.36 E-value=97 Score=24.92 Aligned_cols=27 Identities=11% Similarity=0.204 Sum_probs=15.5
Q ss_pred CchHHHHHHHHHhh--CCCeEEEEecCCC
Q 029271 92 NCKEALSYALSAKE--RGIKIIIVGDGVE 118 (196)
Q Consensus 92 ~p~~~~~~~~~~e~--~~~~V~IavAG~s 118 (196)
.++.+.+++++... .+++++|-.||..
T Consensus 104 d~~~v~~~~~~~~~~~~~id~li~~Ag~~ 132 (285)
T 2c07_A 104 KKEEISEVINKILTEHKNVDILVNNAGIT 132 (285)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 34455555554432 2468888888754
No 345
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=40.25 E-value=1.1e+02 Score=24.06 Aligned_cols=12 Identities=25% Similarity=0.313 Sum_probs=8.2
Q ss_pred CCeEEEEecCCC
Q 029271 107 GIKIIIVGDGVE 118 (196)
Q Consensus 107 ~~~V~IavAG~s 118 (196)
+++++|-.||..
T Consensus 92 ~id~li~~Ag~~ 103 (266)
T 1xq1_A 92 KLDILINNLGAI 103 (266)
T ss_dssp CCSEEEEECCC-
T ss_pred CCcEEEECCCCC
Confidence 467888888753
No 346
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=40.19 E-value=97 Score=25.51 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=29.5
Q ss_pred CCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHH
Q 029271 50 ADAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 102 (196)
Q Consensus 50 ~~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~ 102 (196)
.-..++++|+|+.+ .+...+++.|.+-|. .+.++ -|.++++.+..++
T Consensus 38 ~l~~k~vlVTGas~--GIG~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~ 84 (293)
T 3rih_A 38 DLSARSVLVTGGTK--GIGRGIATVFARAGA--NVAVA--ARSPRELSSVTAE 84 (293)
T ss_dssp CCTTCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEE--ESSGGGGHHHHHH
T ss_pred CCCCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHHHH
Confidence 33568999999988 456777888877785 33333 3455444444333
No 347
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=40.10 E-value=1.1e+02 Score=24.83 Aligned_cols=27 Identities=15% Similarity=0.124 Sum_probs=20.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ .+...+++.|.+-|.
T Consensus 26 ~~k~vlVTGas~--GIG~aia~~l~~~G~ 52 (277)
T 4dqx_A 26 NQRVCIVTGGGS--GIGRATAELFAKNGA 52 (277)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 358999999987 456677777777775
No 348
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=40.08 E-value=1.1e+02 Score=24.93 Aligned_cols=27 Identities=15% Similarity=0.094 Sum_probs=19.7
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+.+ -+...+++.|-+-|.
T Consensus 48 ~~k~vlVTGas~--GIG~aia~~la~~G~ 74 (294)
T 3r3s_A 48 KDRKALVTGGDS--GIGRAAAIAYAREGA 74 (294)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 357999999887 455667777777775
No 349
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=39.96 E-value=1e+02 Score=24.78 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=19.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+++- +...+++.|.+-|.
T Consensus 26 ~gk~vlVTGas~g--IG~aia~~la~~G~ 52 (266)
T 3grp_A 26 TGRKALVTGATGG--IGEAIARCFHAQGA 52 (266)
T ss_dssp TTCEEEESSTTSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 4678999998874 45566666666664
No 350
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=39.82 E-value=1.4e+02 Score=23.52 Aligned_cols=63 Identities=8% Similarity=0.112 Sum_probs=42.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc--------------CCchHHHHHHHHHhh--CCCeEEEEec
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------QNCKEALSYALSAKE--RGIKIIIVGD 115 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH--------------R~p~~~~~~~~~~e~--~~~~V~IavA 115 (196)
..++++|+|+++ -+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..+ .+++++|-.|
T Consensus 14 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~A 89 (247)
T 1uzm_A 14 VSRSVLVTGGNR--GIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA 89 (247)
T ss_dssp CCCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEEC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 457999999987 567788888888885 44433211 123455666665543 2579999999
Q ss_pred CCC
Q 029271 116 GVE 118 (196)
Q Consensus 116 G~s 118 (196)
|..
T Consensus 90 g~~ 92 (247)
T 1uzm_A 90 GLS 92 (247)
T ss_dssp SCC
T ss_pred CCC
Confidence 964
No 351
>3e7l_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; 2.25A {Aquifex aeolicus} PDB: 4fth_A
Probab=39.72 E-value=15 Score=23.97 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=18.7
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 029271 174 YAVKVLGIADEDLLERIRKYV 194 (196)
Q Consensus 174 ~AaqILa~~d~~l~~kl~~~r 194 (196)
.||++|+++-..++.|++.|.
T Consensus 37 ~aA~~LGisr~tL~rklkk~g 57 (63)
T 3e7l_A 37 RTAEEIGIDLSNLYRKIKSLN 57 (63)
T ss_dssp HHHHHHTCCHHHHHHHHHHTT
T ss_pred HHHHHHCcCHHHHHHHHHHhC
Confidence 578999999999999999874
No 352
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=39.66 E-value=70 Score=27.88 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=44.5
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCC
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG 107 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~ 107 (196)
.+++|+.|...+ .-+.+--.+.|+++|+.++..-....-+.+++++.++++.++.
T Consensus 37 ~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D~ 92 (301)
T 1a4i_A 37 RLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDS 92 (301)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCT
T ss_pred EEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 467777786655 4456667788999999999999999889999999999987653
No 353
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=39.61 E-value=1.3e+02 Score=23.94 Aligned_cols=27 Identities=15% Similarity=0.019 Sum_probs=19.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ -+...+++.|-+-|.
T Consensus 10 ~~k~~lVTGas~--GIG~a~a~~la~~G~ 36 (277)
T 3tsc_A 10 EGRVAFITGAAR--GQGRAHAVRMAAEGA 36 (277)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCcc--HHHHHHHHHHHHcCC
Confidence 357888888877 445666777777675
No 354
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=39.28 E-value=1.4e+02 Score=24.08 Aligned_cols=27 Identities=26% Similarity=0.234 Sum_probs=18.3
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++- +...+++.|-+-|.
T Consensus 24 ~~k~~lVTGas~G--IG~~ia~~la~~G~ 50 (281)
T 3v2h_A 24 MTKTAVITGSTSG--IGLAIARTLAKAGA 50 (281)
T ss_dssp TTCEEEEETCSSH--HHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 4578888888774 45566666666664
No 355
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=39.14 E-value=1.4e+02 Score=23.75 Aligned_cols=27 Identities=19% Similarity=0.202 Sum_probs=15.4
Q ss_pred CchHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 92 NCKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 92 ~p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
.++.+.+++++..++ .++++|-.||..
T Consensus 79 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 107 (270)
T 3is3_A 79 QVPEIVKLFDQAVAHFGHLDIAVSNSGVV 107 (270)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 344555555544332 467888877764
No 356
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=39.04 E-value=78 Score=25.85 Aligned_cols=41 Identities=17% Similarity=0.054 Sum_probs=25.6
Q ss_pred HHHHHHHhhCCCeEEEEecCCCCchhHhhh-hccCCcEEEec
Q 029271 97 LSYALSAKERGIKIIIVGDGVEAHLSGVAA-ANSQILVIRVP 137 (196)
Q Consensus 97 ~~~~~~~e~~~~~V~IavAG~sa~L~gvvA-~~t~~PVIgvP 137 (196)
.++.+..+....+++++..+....+++.++ -....|+|..-
T Consensus 76 ~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 117 (384)
T 1vgv_A 76 EGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVE 117 (384)
T ss_dssp HHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEe
Confidence 334444455567999988664445555544 45678998754
No 357
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=38.98 E-value=1.1e+02 Score=26.14 Aligned_cols=27 Identities=15% Similarity=0.003 Sum_probs=18.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ .+...+++.|.+-|.
T Consensus 44 ~gk~vlVTGas~--GIG~aia~~La~~Ga 70 (346)
T 3kvo_A 44 AGCTVFITGASR--GIGKAIALKAAKDGA 70 (346)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCh--HHHHHHHHHHHHCCC
Confidence 357888888887 455666667766665
No 358
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=38.93 E-value=1.4e+02 Score=23.86 Aligned_cols=26 Identities=12% Similarity=0.036 Sum_probs=15.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|-+-|.
T Consensus 11 ~k~vlVTGas~--gIG~aia~~l~~~G~ 36 (281)
T 3svt_A 11 DRTYLVTGGGS--GIGKGVAAGLVAAGA 36 (281)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 46777777766 334455555555554
No 359
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=38.87 E-value=1.4e+02 Score=23.63 Aligned_cols=63 Identities=13% Similarity=0.089 Sum_probs=35.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc----------------------ccCCchHHHHHHHHHhhC--C
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP----------------------PHQNCKEALSYALSAKER--G 107 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S----------------------aHR~p~~~~~~~~~~e~~--~ 107 (196)
..++++|+|+.+- +...+.+.|.+-|.. +.+.+ =-..++.+.+++++..++ +
T Consensus 7 ~~k~vlVTGas~g--IG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 7 EGKSALITGSARG--IGRAFAEAYVREGAT--VAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TTCEEEEETCSSH--HHHHHHHHHHHTTCE--EEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred CCCEEEEECCCcH--HHHHHHHHHHHCCCE--EEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 3578888888764 455566666666642 22221 112334445555544332 5
Q ss_pred CeEEEEecCCC
Q 029271 108 IKIIIVGDGVE 118 (196)
Q Consensus 108 ~~V~IavAG~s 118 (196)
++++|-.||..
T Consensus 83 id~lv~~Ag~~ 93 (259)
T 4e6p_A 83 LDILVNNAALF 93 (259)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCcC
Confidence 68999999874
No 360
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=38.83 E-value=1.4e+02 Score=24.54 Aligned_cols=61 Identities=8% Similarity=0.097 Sum_probs=43.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------------cCCchHHHHHHHHHhhCCCeEEE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-------------------HQNCKEALSYALSAKERGIKIII 112 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa-------------------HR~p~~~~~~~~~~e~~~~~V~I 112 (196)
.+|+++|+|+.+ -+...+++.|.+-|...- ++.- =..++.+.++++++. .++++|
T Consensus 10 ~GK~alVTGas~--GIG~aia~~la~~Ga~Vv--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g--~iDiLV 83 (242)
T 4b79_A 10 AGQQVLVTGGSS--GIGAAIAMQFAELGAEVV--ALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALP--RLDVLV 83 (242)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTCEEE--EEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCS--CCSEEE
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCEEE--EEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcC--CCCEEE
Confidence 479999999998 567889999988887422 2211 123566777776652 479999
Q ss_pred EecCCC
Q 029271 113 VGDGVE 118 (196)
Q Consensus 113 avAG~s 118 (196)
--||..
T Consensus 84 NNAGi~ 89 (242)
T 4b79_A 84 NNAGIS 89 (242)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 999864
No 361
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=38.68 E-value=85 Score=26.78 Aligned_cols=58 Identities=7% Similarity=0.058 Sum_probs=43.0
Q ss_pred CeEEEEEcCCCCH--------------HHHHHHHHHHHHhCCCeEEEEEccc------C-CchHHHHHHHHHhhCCCeEE
Q 029271 53 PIVGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILPPH------Q-NCKEALSYALSAKERGIKII 111 (196)
Q Consensus 53 ~~V~IimGS~SD~--------------~~~~~~~~~l~~~gi~~ev~V~SaH------R-~p~~~~~~~~~~e~~~~~V~ 111 (196)
..|. +..|.||. +.++++.+.+++.|..++..++.+. | .|+.+.++++.+.+-|++.|
T Consensus 96 ~~v~-i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 174 (307)
T 1ydo_A 96 NEAC-VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISEL 174 (307)
T ss_dssp SEEE-EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCE
T ss_pred CEEE-EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 3444 44588885 6677888888899998877776642 2 57889999999988888643
No 362
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=38.55 E-value=61 Score=27.93 Aligned_cols=80 Identities=10% Similarity=0.023 Sum_probs=57.4
Q ss_pred CeEEEEEcCCCCHHHHHHH-HHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHHhhCCCeEEEEecCC-CCchhHhhhh
Q 029271 53 PIVGIIMESDLDLPVMNDA-ARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~-~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~e~~~~~V~IavAG~-sa~L~gvvA~ 127 (196)
..+++++|+. +++. .+.+..+|..--+.+.. .|..++.+.+.+.++ +.+.++|++.+.. ...|++.+|+
T Consensus 30 ~V~av~~G~~-----~~~~~~~~a~a~GaDkv~~v~d~~l~~~~~~~~a~~La~~-~~~pd~VL~g~ts~G~~laprlAa 103 (307)
T 1efp_A 30 DVTVLCAGAS-----AKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGL-AGDYSHIAAPATTDAKNVMPRVAA 103 (307)
T ss_dssp CEEEEEEETT-----CHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHH-HTTCSEEEEESSHHHHHHHHHHHH
T ss_pred CEEEEEECCc-----hHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHH-ccCCCEEEEeCCcchhhHHHHHHH
Confidence 4678889964 2333 44556788875566655 367788888888888 6677877777644 4679999999
Q ss_pred ccCCcEEEecC
Q 029271 128 NSQILVIRVPL 138 (196)
Q Consensus 128 ~t~~PVIgvP~ 138 (196)
....|.+.-=+
T Consensus 104 ~L~~~~vtdv~ 114 (307)
T 1efp_A 104 LLDVMVLSDVS 114 (307)
T ss_dssp HTTCCEEEEES
T ss_pred HhCCCccccEE
Confidence 99999885433
No 363
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=38.48 E-value=1.4e+02 Score=23.98 Aligned_cols=27 Identities=15% Similarity=0.076 Sum_probs=16.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+.+ -+...+++.|-+-|.
T Consensus 30 ~gk~~lVTGas~--GIG~aia~~la~~G~ 56 (271)
T 3v2g_A 30 AGKTAFVTGGSR--GIGAAIAKRLALEGA 56 (271)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 356777777766 444555555555554
No 364
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=38.35 E-value=9.8 Score=31.81 Aligned_cols=89 Identities=16% Similarity=0.087 Sum_probs=49.9
Q ss_pred cccccCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc-----CCchHHHH----HHHHHhhCCCe-EEEEe
Q 029271 45 FLLLAADAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-----QNCKEALS----YALSAKERGIK-IIIVG 114 (196)
Q Consensus 45 ~~~~~~~~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH-----R~p~~~~~----~~~~~e~~~~~-V~Iav 114 (196)
++.|.. ..|+|+=|+-..+.+.+++.+.+-.-.+-| ---++| |+.+.+.+ .++.+++.|++ ++|++
T Consensus 7 ~~~~~~--~~IGv~DsG~Ggltv~~~i~~~~P~~~~iy--~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~iviaC 82 (273)
T 2oho_A 7 SHMMDT--RPIGFLDSGVGGLTVVCELIRQLPHEKIVY--IGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFAC 82 (273)
T ss_dssp SCBCCC--CCEEEEESSSTTHHHHHHHHHHCTTCCEEE--EECGGGCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECC
T ss_pred ccccCC--CcEEEEeCCCcHHHHHHHHHHHCCCCCEEE--EeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 455432 369999333345889999888764332111 111222 55555544 44556677886 55555
Q ss_pred cCCCCchhHhhhhccCCcEEEec
Q 029271 115 DGVEAHLSGVAAANSQILVIRVP 137 (196)
Q Consensus 115 AG~sa~L~gvvA~~t~~PVIgvP 137 (196)
-..+...-.-+......||||+.
T Consensus 83 NTas~~~l~~lr~~~~iPvigi~ 105 (273)
T 2oho_A 83 NTATAVAWEEVKAALDIPVLGVV 105 (273)
T ss_dssp HHHHHHHHHHHHHHCSSCEEESH
T ss_pred chHhHHHHHHHHHhCCCCEEecc
Confidence 44443212355566789999953
No 365
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=38.34 E-value=27 Score=25.43 Aligned_cols=39 Identities=15% Similarity=0.177 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccc-CCchHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIKILPPH-QNCKEALSYAL 101 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~V~SaH-R~p~~~~~~~~ 101 (196)
+.=+.|+++...|++.|++|+.+=..-+ -+.+++.++++
T Consensus 13 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~~l~~~~~ 52 (120)
T 2kok_A 13 KNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLK 52 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEEHHHHCCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCcEEEEeeeCCCCCHHHHHHHHH
Confidence 3448999999999999999987644332 23366666665
No 366
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=38.32 E-value=1.2e+02 Score=27.40 Aligned_cols=58 Identities=17% Similarity=0.103 Sum_probs=41.1
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEe
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 114 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~Iav 114 (196)
..|.|+..+....+.+.++...|.+-|+.+|+- |+.-..+.+-++.+...|+..+|.+
T Consensus 420 ~~V~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 477 (517)
T 4g85_A 420 TQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 477 (517)
T ss_dssp CCEEEEESSSSCHHHHHHHHHHHHHTTCCEEEC----SSSSCCHHHHHHHHHHHCCCEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 368888888888999999999999999988773 3333344444566677788644444
No 367
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=38.22 E-value=1.2e+02 Score=23.37 Aligned_cols=25 Identities=24% Similarity=0.244 Sum_probs=14.4
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
++++|+|+++ .+...+.+.|.+-|.
T Consensus 3 k~vlITGas~--gIG~~ia~~l~~~G~ 27 (235)
T 3l77_A 3 KVAVITGASR--GIGEAIARALARDGY 27 (235)
T ss_dssp CEEEEESCSS--HHHHHHHHHHHHTTC
T ss_pred CEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 5667777665 344555555555553
No 368
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=38.19 E-value=1.2e+02 Score=23.20 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=40.6
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeE--------------------EEEEcccCCchHHHHHHHHHhhCCCeEE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKII 111 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~e--------------------v~V~SaHR~p~~~~~~~~~~e~~~~~V~ 111 (196)
+| ++.|.-+-...++.....|..+|+++. +=+.|.-..+.++.+.++.+.++|++++
T Consensus 47 ~I-~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi 123 (201)
T 3fxa_A 47 KI-VVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLI 123 (201)
T ss_dssp CE-EEECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEE
T ss_pred cE-EEEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEE
Confidence 45 445554558899999999999999754 3455666667777777777777777644
No 369
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=38.13 E-value=80 Score=24.52 Aligned_cols=26 Identities=19% Similarity=0.167 Sum_probs=15.8
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+.+.|.+-|.
T Consensus 14 ~k~vlITGas~--gIG~~ia~~l~~~G~ 39 (247)
T 3i1j_A 14 GRVILVTGAAR--GIGAAAARAYAAHGA 39 (247)
T ss_dssp TCEEEESSTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 46777777776 344555555655554
No 370
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=38.06 E-value=33 Score=25.27 Aligned_cols=41 Identities=12% Similarity=0.154 Sum_probs=30.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEE-EEcccCCchHHHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 103 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~-V~SaHR~p~~~~~~~~~~ 103 (196)
+.=+.|+++.+.|++.|++|+.+ +..-.-+.+++.++++..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~~ 53 (120)
T 3gkx_A 12 PACSTCQKAKKWLIENNIEYTNRLIVDDNPTVEELKAWIPLS 53 (120)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEEETTTTCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEecccCcCCHHHHHHHHHHc
Confidence 34579999999999999999854 444445666777776643
No 371
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=37.88 E-value=1.6e+02 Score=25.66 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=11.1
Q ss_pred HHHHHHHHHcc-CCHHHHHHHH
Q 029271 171 AALYAVKVLGI-ADEDLLERIR 191 (196)
Q Consensus 171 AA~~AaqILa~-~d~~l~~kl~ 191 (196)
..-+|..|..+ .|+..+++++
T Consensus 509 ~~~la~~i~~l~~~~~~~~~~~ 530 (568)
T 2vsy_A 509 DAAFVAKAVALASDPAALTALH 530 (568)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHH
Confidence 33344444433 4777777664
No 372
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.87 E-value=55 Score=23.76 Aligned_cols=34 Identities=21% Similarity=0.203 Sum_probs=24.8
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP 89 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa 89 (196)
.|.+.+. ..=++|+++...|+++|++|+..=...
T Consensus 28 ~vvvf~~--~~Cp~C~~~~~~L~~~~i~~~~vdid~ 61 (130)
T 2cq9_A 28 CVVIFSK--TSCSYCTMAKKLFHDMNVNYKVVELDL 61 (130)
T ss_dssp SEEEEEC--SSCSHHHHHHHHHHHHTCCCEEEETTT
T ss_pred cEEEEEc--CCChHHHHHHHHHHHcCCCcEEEECcC
Confidence 4666543 445899999999999999987544333
No 373
>3k6v_A Solute-binding protein MA_0280; MODA, molybdate, periplasmic BIN protein, ABC transporter, transport protein, ligand, metal- protein; HET: CIT; 1.69A {Methanosarcina acetivorans} PDB: 3k6u_A* 3k6w_A 3k6x_A
Probab=37.85 E-value=2e+02 Score=24.91 Aligned_cols=125 Identities=10% Similarity=0.102 Sum_probs=67.6
Q ss_pred EEEEcCCCCHHHHHHHHHHHH-Hh-CCCeEEEEEcccCCchHHHHHHHHH-h-hCCCeEEEEecCC------CCchhH-h
Q 029271 56 GIIMESDLDLPVMNDAARTLS-DF-GVPYEIKILPPHQNCKEALSYALSA-K-ERGIKIIIVGDGV------EAHLSG-V 124 (196)
Q Consensus 56 ~IimGS~SD~~~~~~~~~~l~-~~-gi~~ev~V~SaHR~p~~~~~~~~~~-e-~~~~~V~IavAG~------sa~L~g-v 124 (196)
..|.++.|-.+.++++.+.++ +. |+..++.-.+ .. ++.++. + +..++||+...-. ..++++ .
T Consensus 45 L~V~~a~sl~~~~~~l~~~Fe~~~pgv~V~~~~gg----Sg---~l~~qi~e~G~~aDVf~sad~~~~~~l~~~g~~~~~ 117 (354)
T 3k6v_A 45 LTVFHAGSLSVPFEELEAEFEAQHPGVDVQREAAG----SA---QSVRKITELGKKADVLASADYALIPSLMVPEYADWY 117 (354)
T ss_dssp EEEEEEGGGHHHHHHHHHHHHHHSTTCEEEEEEEC----HH---HHHHHHHTSCCCCSEEEESSTTHHHHHTTTTTCSCE
T ss_pred EEEEEecchHHHHHHHHHHHHHHCCCcEEEEEeCC----HH---HHHHHHHhcCCCccEEEECCHHHHHHHHhCCCCCCc
Confidence 344444466778899999887 55 7766553322 22 233333 2 3346899865321 112210 0
Q ss_pred hhhccCCcEEEecCCCC---CCChhhhhhhhcCCCCCeeeEEecCChhh--HHHHHHHHHcc-----CCHHHHHHHH
Q 029271 125 AAANSQILVIRVPLLSE---DWSEDDVINSIRMPSHVQVASVPRNNAKN--AALYAVKVLGI-----ADEDLLERIR 191 (196)
Q Consensus 125 vA~~t~~PVIgvP~~~~---~~~G~DLlS~lqmPsGvpvatV~I~~~~n--AA~~AaqILa~-----~d~~l~~kl~ 191 (196)
..=-....||.+|..+. .....+++..|.- +++ .++|.+|.. ++..|.++|.. .+..+|++|.
T Consensus 118 ~~~a~n~lVliv~~~~p~~~~I~~~~~~~~L~~-~~~---riai~~P~~~P~G~~a~~~l~~a~~~~~~~gl~~~l~ 190 (354)
T 3k6v_A 118 AAFARNQMILAYTNESKYGDEINTDNWYEILRR-PDV---RYGFSNPNDDPAGYRSQMVTQLAESYYNDDMIYDDLM 190 (354)
T ss_dssp EEEEECCEEEEECTTSTTTTTCCTTTHHHHHHS-TTC---CEEEECTTTCHHHHHHHHHHHHHHHHHTCTTHHHHHT
T ss_pred eEeECCeEEEEEECCCccccccCcccHHHHhcC-CCC---EEEEcCCCCCChHHHHHHHHHHHHhhcccccHHHHHh
Confidence 00113457999987543 2332123333332 343 455677764 77777777763 4567899883
No 374
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=37.81 E-value=1.3e+02 Score=24.22 Aligned_cols=63 Identities=16% Similarity=0.114 Sum_probs=40.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------------cCCchHHHHHHHHHhhC--CCeE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-------------------HQNCKEALSYALSAKER--GIKI 110 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa-------------------HR~p~~~~~~~~~~e~~--~~~V 110 (196)
..++++|+|+++ -+...+.+.|.+-|... .+++- -..++.+.+++++..+. ++++
T Consensus 15 ~~k~vlVTGas~--gIG~aia~~l~~~G~~V--~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 90 (266)
T 3p19_A 15 MKKLVVITGASS--GIGEAIARRFSEEGHPL--LLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA 90 (266)
T ss_dssp CCCEEEEESTTS--HHHHHHHHHHHHTTCCE--EEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCCEE--EEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence 357999999987 55677888888888642 22210 12334555566555433 5799
Q ss_pred EEEecCCC
Q 029271 111 IIVGDGVE 118 (196)
Q Consensus 111 ~IavAG~s 118 (196)
+|-.||..
T Consensus 91 lvnnAg~~ 98 (266)
T 3p19_A 91 IVNNAGMM 98 (266)
T ss_dssp EEECCCCC
T ss_pred EEECCCcC
Confidence 99999964
No 375
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=37.81 E-value=1.5e+02 Score=24.30 Aligned_cols=64 Identities=11% Similarity=0.087 Sum_probs=44.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---------------cCCchHHHHHHHHHhhC--CCeEEEEe
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------------HQNCKEALSYALSAKER--GIKIIIVG 114 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa---------------HR~p~~~~~~~~~~e~~--~~~V~Iav 114 (196)
++|+++|+|+.| .+...+++.|-+-|... -+++- -..++.+.+++++..++ +++++|-.
T Consensus 10 ~GK~alVTGas~--GIG~aia~~la~~Ga~V--~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn 85 (261)
T 4h15_A 10 RGKRALITAGTK--GAGAATVSLFLELGAQV--LTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHM 85 (261)
T ss_dssp TTCEEEESCCSS--HHHHHHHHHHHHTTCEE--EEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred CCCEEEEeccCc--HHHHHHHHHHHHcCCEE--EEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 478999999999 55678889999989743 22221 12345666777766543 46999999
Q ss_pred cCCCC
Q 029271 115 DGVEA 119 (196)
Q Consensus 115 AG~sa 119 (196)
||...
T Consensus 86 AG~~~ 90 (261)
T 4h15_A 86 LGGSS 90 (261)
T ss_dssp CCCCC
T ss_pred CCCCc
Confidence 98654
No 376
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=37.78 E-value=40 Score=22.82 Aligned_cols=73 Identities=8% Similarity=0.020 Sum_probs=43.5
Q ss_pred eEEEEEcCCCCHHHH------HHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 54 IVGIIMESDLDLPVM------NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 54 ~V~IimGS~SD~~~~------~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
+|.|.+- +-=++| +++...|++.|++|+..=...+ ++...++.+.+ | .+
T Consensus 3 ~v~ly~~--~~C~~c~~~~~~~~ak~~L~~~~i~~~~~di~~~--~~~~~~l~~~~------------g---------~~ 57 (93)
T 1t1v_A 3 GLRVYST--SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQD--NALRDEMRTLA------------G---------NP 57 (93)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSC--HHHHHHHHHHT------------T---------CT
T ss_pred CEEEEEc--CCCCCchhhHHHHHHHHHHHHCCCceEEEECCCC--HHHHHHHHHHh------------C---------CC
Confidence 4555543 344677 8999999999999986555433 43333332211 1 01
Q ss_pred ccCCcEEEecCCCCCCChhh-hhhhhc
Q 029271 128 NSQILVIRVPLLSEDWSEDD-VINSIR 153 (196)
Q Consensus 128 ~t~~PVIgvP~~~~~~~G~D-LlS~lq 153 (196)
..+.|+|-+ .+...+|.| +....+
T Consensus 58 ~~~vP~ifi--~g~~igG~d~l~~l~~ 82 (93)
T 1t1v_A 58 KATPPQIVN--GNHYCGDYELFVEAVE 82 (93)
T ss_dssp TCCSCEEEE--TTEEEEEHHHHHHHHH
T ss_pred CCCCCEEEE--CCEEEeCHHHHHHHHh
Confidence 457788753 233467777 777665
No 377
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=37.74 E-value=23 Score=28.95 Aligned_cols=55 Identities=13% Similarity=0.203 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC-CCeEEEEecCCCCchhHh
Q 029271 68 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGV 124 (196)
Q Consensus 68 ~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~-~~~V~IavAG~sa~L~gv 124 (196)
+++..+.++.-|++ +.|.|.+|++++=.++..+.... |..|.-|-.|.|.|.-|.
T Consensus 41 l~~m~~aA~~~Gi~--l~v~sGyRS~e~Q~~Ly~~g~s~~G~~vt~A~pg~S~H~~G~ 96 (179)
T 1xp2_A 41 TRNVIKKMAKEGIY--LCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGV 96 (179)
T ss_dssp HHHHHHHHHTTTCC--EEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTC
T ss_pred HHHHHHHHHHcCCe--EEEEEeecCHHHHHHHHHhhcccCCceeeeCCCCCCCcccee
Confidence 44455555677775 89999999999998887655332 323333445778886554
No 378
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=37.68 E-value=87 Score=24.77 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=18.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+.+ .+...+.+.|.+-|.
T Consensus 11 ~~k~vlVTGas~--gIG~aia~~l~~~G~ 37 (252)
T 3f1l_A 11 NDRIILVTGASD--GIGREAAMTYARYGA 37 (252)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 357888888877 445566666666665
No 379
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=37.63 E-value=73 Score=26.52 Aligned_cols=48 Identities=6% Similarity=-0.063 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc------cC-CchHHHHHHHHHhhCCCeEE
Q 029271 64 DLPVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKII 111 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~V~Sa------HR-~p~~~~~~~~~~e~~~~~V~ 111 (196)
.++.++++.+.+++.|+.++..+... .| .|+.+.++++.+.+-|++.|
T Consensus 118 ~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 118 SIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 56777778888899999888666644 33 57889999998888888643
No 380
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=37.48 E-value=1.3e+02 Score=23.87 Aligned_cols=27 Identities=11% Similarity=0.101 Sum_probs=19.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ -+...+.+.|.+-|.
T Consensus 6 ~~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (260)
T 1nff_A 6 TGKVALVSGGAR--GMGASHVRAMVAEGA 32 (260)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 357888999887 556667777777675
No 381
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=37.46 E-value=1.5e+02 Score=23.71 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=18.1
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ .+...+.+.|.+-|.
T Consensus 20 ~~k~~lVTGas~--gIG~~ia~~l~~~G~ 46 (267)
T 1vl8_A 20 RGRVALVTGGSR--GLGFGIAQGLAEAGC 46 (267)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 357888888876 445666666666664
No 382
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=37.45 E-value=27 Score=25.75 Aligned_cols=41 Identities=10% Similarity=0.066 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEE-EEcccCCchHHHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSA 103 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~-V~SaHR~p~~~~~~~~~~ 103 (196)
..=+.|+++.+.|++.|++|+.+ +..-.-+.+++.++++..
T Consensus 12 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~t~~eL~~~l~~~ 53 (119)
T 3f0i_A 12 PKCSKSRETLALLENQGIAPQVIKYLETSPSVEELKRLYQQL 53 (119)
T ss_dssp TTCHHHHHHHHHHHHTTCCCEEECHHHHCCCHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCcCcHHHHHHHHHHc
Confidence 44679999999999999999865 544455667777777654
No 383
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=37.34 E-value=77 Score=23.83 Aligned_cols=35 Identities=14% Similarity=0.023 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHH
Q 029271 67 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 103 (196)
Q Consensus 67 ~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~ 103 (196)
.|..++..|+..||+|+..=.+ ..++.-.++.+.+
T Consensus 18 ~c~~aK~lL~~kgV~feEidI~--~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 18 KQQDVLGFLEANKIGFEEKDIA--ANEENRKWMRENV 52 (121)
T ss_dssp HHHHHHHHHHHTTCCEEEEECT--TCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCceEEEECC--CCHHHHHHHHHhc
Confidence 3589999999999999865554 3556555565543
No 384
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=37.27 E-value=1.1e+02 Score=25.11 Aligned_cols=59 Identities=8% Similarity=0.005 Sum_probs=41.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh-------------C-CCeEEEEecCCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-------------R-GIKIIIVGDGVE 118 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~-------------~-~~~V~IavAG~s 118 (196)
.+.++|.|. . ..+..+...|.+.| +++.|. .|++++..++.+++.. + .++++|..++..
T Consensus 119 ~~~vlvlGa-G--g~g~a~a~~L~~~G--~~v~v~--~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 119 NQHVLILGA-G--GATKGVLLPLLQAQ--QNIVLA--NRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp TCEEEEECC-S--HHHHTTHHHHHHTT--CEEEEE--ESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHCC--CEEEEE--ECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCC
Confidence 456677786 3 57888888999999 566664 7999999888876532 1 456777766654
No 385
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=37.12 E-value=36 Score=25.04 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEE-EEcccCCchHHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALS 102 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~-V~SaHR~p~~~~~~~~~ 102 (196)
+.=+.|+++.+.|++-|++|+.+ +..-.-+.+++.++++.
T Consensus 11 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~ 51 (120)
T 3fz4_A 11 PKCSTCRRAKAELDDLAWDYDAIDIKKNPPAASLIRNWLEN 51 (120)
T ss_dssp SSCHHHHHHHHHHHHHTCCEEEEETTTSCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEeccCchhHHHHHHHHHH
Confidence 34579999999999999999865 43333455566666553
No 386
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=37.11 E-value=88 Score=27.50 Aligned_cols=56 Identities=4% Similarity=-0.024 Sum_probs=41.5
Q ss_pred EEEEEcCCCC-------------HHHHHHHHHHHHHhC--CCeEEEEEcccCC-chHHHHHHHHHhhCCCeEE
Q 029271 55 VGIIMESDLD-------------LPVMNDAARTLSDFG--VPYEIKILPPHQN-CKEALSYALSAKERGIKII 111 (196)
Q Consensus 55 V~IimGS~SD-------------~~~~~~~~~~l~~~g--i~~ev~V~SaHR~-p~~~~~~~~~~e~~~~~V~ 111 (196)
+.-+..|.|| ++.+.++.+.+++.| +.+.+....+.|+ |+.+.++++.+.+- ++.|
T Consensus 90 ~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i 161 (382)
T 2ztj_A 90 GIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRV 161 (382)
T ss_dssp EEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEE
T ss_pred EEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEE
Confidence 4445567898 677888899999999 8777777778885 67888899988877 7543
No 387
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=36.99 E-value=1.5e+02 Score=23.28 Aligned_cols=62 Identities=5% Similarity=-0.033 Sum_probs=43.1
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------cCCchHHHHHHHHHhhC--CCeEEEEecCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-------------HQNCKEALSYALSAKER--GIKIIIVGDGV 117 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa-------------HR~p~~~~~~~~~~e~~--~~~V~IavAG~ 117 (196)
.++++|+|+++ .+...+++.|.+-|.. +.+.+- -..++.+.+++++..++ .++++|-.||.
T Consensus 22 ~k~vlITGas~--gIG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~ 97 (251)
T 3orf_A 22 SKNILVLGGSG--ALGAEVVKFFKSKSWN--TISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG 97 (251)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTCE--EEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCCE--EEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 47899999988 4667888888888864 333321 23456777777776543 45999999996
Q ss_pred C
Q 029271 118 E 118 (196)
Q Consensus 118 s 118 (196)
.
T Consensus 98 ~ 98 (251)
T 3orf_A 98 W 98 (251)
T ss_dssp C
T ss_pred C
Confidence 3
No 388
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=36.97 E-value=1.4e+02 Score=23.84 Aligned_cols=26 Identities=8% Similarity=-0.009 Sum_probs=17.0
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+.+.|.+.|.
T Consensus 31 ~k~vlITGasg--gIG~~la~~L~~~G~ 56 (272)
T 1yb1_A 31 GEIVLITGAGH--GIGRLTAYEFAKLKS 56 (272)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 46778888776 455666666666664
No 389
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=36.89 E-value=89 Score=20.93 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=23.0
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCC---eEEE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVP---YEIK 85 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~---~ev~ 85 (196)
.|.+.+. +.=++|+++...|+++|++ |+..
T Consensus 13 ~v~~f~~--~~C~~C~~~~~~L~~~~~~~~~~~~v 45 (105)
T 1kte_A 13 KVVVFIK--PTCPFCRKTQELLSQLPFKEGLLEFV 45 (105)
T ss_dssp CEEEEEC--SSCHHHHHHHHHHHHSCBCTTSEEEE
T ss_pred CEEEEEc--CCCHhHHHHHHHHHHcCCCCCccEEE
Confidence 4655543 4559999999999999998 6654
No 390
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=36.89 E-value=1.3e+02 Score=23.67 Aligned_cols=117 Identities=19% Similarity=0.196 Sum_probs=75.5
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhC-CC---eE-EEEEcccCCchHHHHHHHHHhhCCCeEEEEec----CCCC
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFG-VP---YE-IKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEA 119 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~g-i~---~e-v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA----G~sa 119 (196)
..+++||.+.-.+. .-.+.+.+.|++.| +. ++ ++|-++.-.|-...++++ +..++.+|+.. |..-
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG~VIrG~T~ 88 (156)
T 3nq4_A 12 DARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAK---SGKYDAVVALGTVIRGGTA 88 (156)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHH---HCSCSEEEEEEEEECCSST
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHh---cCCCCEEEEeeeeecCCch
Confidence 45899999999888 77789999999999 73 44 688899888877777654 34577777643 5565
Q ss_pred chhHh----------hhhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 120 HLSGV----------AAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 120 ~L~gv----------vA~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
|-=-| ++-.+..||+..=....+. ..-+.- .|. -.-+.|..||..|.++..+
T Consensus 89 Hfd~Va~~v~~Gl~~v~L~~~vPV~~GVLT~~~~--eQA~~R----ag~----~~~nKG~eaA~aalem~~l 150 (156)
T 3nq4_A 89 HFEYVAGGASNGLASVAQDSGVPVAFGVLTTESI--EQAIER----AGT----KAGNKGAEAALTALEMINV 150 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESCH--HHHHHH----BTS----TTCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCEEEEEeCCCCH--HHHHHH----hCC----cccccHHHHHHHHHHHHHH
Confidence 54322 2224678887654332111 111111 110 0126788899999988765
No 391
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=36.73 E-value=1.6e+02 Score=23.49 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=38.2
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc----------------------CCchHHHHHHHHHhhC--C
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH----------------------QNCKEALSYALSAKER--G 107 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH----------------------R~p~~~~~~~~~~e~~--~ 107 (196)
..++++|+|+++ -+...+++.|-+-|.. +-+.+-. ..++.+.+++++..++ +
T Consensus 10 ~~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (271)
T 3tzq_B 10 ENKVAIITGACG--GIGLETSRVLARAGAR--VVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGR 85 (271)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTCE--EEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 457999999987 4566777777777753 3332211 1233444444444322 5
Q ss_pred CeEEEEecCCC
Q 029271 108 IKIIIVGDGVE 118 (196)
Q Consensus 108 ~~V~IavAG~s 118 (196)
++++|-.||..
T Consensus 86 id~lv~nAg~~ 96 (271)
T 3tzq_B 86 LDIVDNNAAHS 96 (271)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 78999988875
No 392
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=36.72 E-value=1.3e+02 Score=22.81 Aligned_cols=87 Identities=9% Similarity=-0.114 Sum_probs=49.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHH-HhCCCeEEEEEcccCC------------chHHHHHHHHHhhCCCeEEEEecCC-C
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLS-DFGVPYEIKILPPHQN------------CKEALSYALSAKERGIKIIIVGDGV-E 118 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~-~~gi~~ev~V~SaHR~------------p~~~~~~~~~~e~~~~~V~IavAG~-s 118 (196)
.+|.||.||..--..-+++.+.+. .+.-..++.+...... ++.+.++.++.+. ++.||-++-. .
T Consensus 7 Mkilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~--aD~ii~~sP~y~ 84 (193)
T 1rtt_A 7 IKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRA--ADALLFATPEYN 84 (193)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHH--CSEEEEECCEET
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHh--CCEEEEEccccc
Confidence 379999999863345555555543 4432246666666553 3667777777766 5555544432 3
Q ss_pred CchhHhh----h--------hccCCcEEEecCCCC
Q 029271 119 AHLSGVA----A--------ANSQILVIRVPLLSE 141 (196)
Q Consensus 119 a~L~gvv----A--------~~t~~PVIgvP~~~~ 141 (196)
..+|+.+ - ....+||.-+-+.++
T Consensus 85 ~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg 119 (193)
T 1rtt_A 85 YSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAG 119 (193)
T ss_dssp TEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSS
T ss_pred cCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCC
Confidence 4445443 1 245677776666543
No 393
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=36.69 E-value=1.3e+02 Score=24.25 Aligned_cols=81 Identities=12% Similarity=-0.050 Sum_probs=0.0
Q ss_pred CeEEEEEcCCCCHHH--HHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccC
Q 029271 53 PIVGIIMESDLDLPV--MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 130 (196)
Q Consensus 53 ~~V~IimGS~SD~~~--~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~ 130 (196)
.+|++|. +..+... .+...+.|++.|++...... ...........+++....+.++|++.+....+..-+-+....
T Consensus 140 ~~ia~i~-~~~~~g~~~~~~~~~~l~~~g~~v~~~~~-~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~ 217 (368)
T 4eyg_A 140 KKVATLT-SDYAPGNDALAFFKERFTAGGGEIVEEIK-VPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGNFMKQFAER 217 (368)
T ss_dssp CEEEEEE-ESSHHHHHHHHHHHHHHHHTTCEEEEEEE-ECSSSCCCHHHHHHHHHHCCSEEEEECCTTCHHHHHHHHHHT
T ss_pred CEEEEEe-cCchHhHHHHHHHHHHHHHcCCEEEEEEe-CCCCCCcHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHHc
Q ss_pred ------CcEEE
Q 029271 131 ------ILVIR 135 (196)
Q Consensus 131 ------~PVIg 135 (196)
+|+|+
T Consensus 218 g~~~~~v~~~~ 228 (368)
T 4eyg_A 218 GLDKSGIKVIG 228 (368)
T ss_dssp TGGGTTCEEEE
T ss_pred CCCcCCceEEe
No 394
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=36.55 E-value=21 Score=28.56 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=36.9
Q ss_pred HHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh-CCCeEEEEecCCCCchhHhh
Q 029271 69 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 69 ~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~-~~~~V~IavAG~sa~L~gvv 125 (196)
+++.+.+++-|| ++.|.|.+|+.++=.++..+... .|..+.-+-.|.|.|-.|..
T Consensus 42 ~~m~~~a~~~Gi--~l~i~sgyRs~~~Q~~Ly~~~~~~~g~~~~~a~pg~S~H~~G~A 97 (179)
T 2vo9_A 42 RNVIKKMAKEGI--YLCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGVA 97 (179)
T ss_dssp HHHHHHHHTTTC--CEEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTCE
T ss_pred HHHHHHHHHCCC--eEEEEEEECCHHHHHHHHHHhcccCCCceecCCCCCCCCCCccc
Confidence 344444455677 58999999999999998765543 23344445667787766553
No 395
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=36.50 E-value=1.5e+02 Score=23.18 Aligned_cols=63 Identities=5% Similarity=0.032 Sum_probs=41.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---------------cCCchHHHHHHHHHhhC--CCeEEEEe
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------------HQNCKEALSYALSAKER--GIKIIIVG 114 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa---------------HR~p~~~~~~~~~~e~~--~~~V~Iav 114 (196)
..++++|+|+++ .+...+.+.|.+-|. ++.+.+- -..++.+.+++++..++ +++++|-.
T Consensus 6 ~~k~vlVTGas~--giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~ 81 (250)
T 2fwm_X 6 SGKNVWVTGAGK--GIGYATALAFVEAGA--KVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNA 81 (250)
T ss_dssp TTCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEEC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 357899999987 556778888887785 3333221 12345666666655432 57999999
Q ss_pred cCCC
Q 029271 115 DGVE 118 (196)
Q Consensus 115 AG~s 118 (196)
||..
T Consensus 82 Ag~~ 85 (250)
T 2fwm_X 82 AGIL 85 (250)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 9974
No 396
>3vk9_A Glutathione S-transferase delta; glutathione binding; 2.00A {Bombyx mori}
Probab=36.46 E-value=48 Score=25.44 Aligned_cols=36 Identities=11% Similarity=0.118 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHH
Q 029271 66 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 101 (196)
Q Consensus 66 ~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~ 101 (196)
+.+.++.-+|++.|++||+......+......+|.+
T Consensus 12 ~~~~~v~~~l~~~gi~~e~~~v~~~~~~~~~~~~~~ 47 (216)
T 3vk9_A 12 APCRAVLLTAKALNLNLNLKLVDLHHGEQLKPEYLK 47 (216)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCGGGTGGGSHHHHH
T ss_pred hhHHHHHHHHHHcCCCCEEEEeCCCCCccCCHHHHH
Confidence 778999999999999999988776555444445543
No 397
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=36.46 E-value=83 Score=24.76 Aligned_cols=117 Identities=15% Similarity=0.148 Sum_probs=73.3
Q ss_pred CCeEEEEEcCCCCH---HHHHHHHHHHHHhCCC----eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEec----CCCCc
Q 029271 52 APIVGIIMESDLDL---PVMNDAARTLSDFGVP----YEIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAH 120 (196)
Q Consensus 52 ~~~V~IimGS~SD~---~~~~~~~~~l~~~gi~----~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA----G~sa~ 120 (196)
..+++|+.+.-.+. .-.+.+.+.|++.|+. ..++|-++.-.|-...++++ +..++.+||.. |..-|
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIalG~VIrG~T~H 88 (154)
T 1hqk_A 12 GLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELAR---KEDIDAVIAIGVLIRGATPH 88 (154)
T ss_dssp TCCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHT---CTTCCEEEEEEEEECCSSTH
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEeeeeecCCchH
Confidence 35899999998888 7788899999999986 24678888777766655543 34578777643 55544
Q ss_pred hhHhh----------hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 121 LSGVA----------AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 121 L~gvv----------A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
-=-|. +-.|..||+..=....+. ..-+. + .| +-.-+.+..||..|.+++.+
T Consensus 89 fd~Va~~vs~gl~~v~l~~~vPV~~GVLT~~~~--eQA~~--R--ag----~~~~nkG~eaA~aalem~~l 149 (154)
T 1hqk_A 89 FDYIASEVSKGLANLSLELRKPITFGVITADTL--EQAIE--R--AG----TKHGNKGWEAALSAIEMANL 149 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCEEEEEEEESSH--HHHHH--H--EE----ETTEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCH--HHHHH--H--hc----ccccchHHHHHHHHHHHHHH
Confidence 43221 224778887763222111 00111 1 01 11126788899999998865
No 398
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=36.45 E-value=1.4e+02 Score=23.44 Aligned_cols=53 Identities=8% Similarity=0.085 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 65 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 65 ~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
.+..++..+.++..|..+....+ =-..++.+.+++++..++ +++++|-.||..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~-Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 3osu_A 39 KEKAEAVVEEIKAKGVDSFAIQA-NVADADEVKAMIKEVVSQFGSLDVLVNNAGIT 93 (246)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEC-CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEEc-cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 34444555555555544332222 123455555655554332 568888888764
No 399
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=36.43 E-value=1.5e+02 Score=23.39 Aligned_cols=26 Identities=19% Similarity=0.208 Sum_probs=15.1
Q ss_pred chHHHHHHHHHhh--CCCeEEEEecCCC
Q 029271 93 CKEALSYALSAKE--RGIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~--~~~~V~IavAG~s 118 (196)
++.+.+++++..+ .+++++|-.||..
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 92 (258)
T 3a28_C 65 KANFDSAIDEAAEKLGGFDVLVNNAGIA 92 (258)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 3444444444332 2578999888864
No 400
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=36.38 E-value=1.4e+02 Score=23.44 Aligned_cols=26 Identities=15% Similarity=0.202 Sum_probs=15.1
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
++.+.+++++..++ +++++|-.||..
T Consensus 69 ~~~~~~~~~~~~~~~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 69 PEGVDAVVESVRSSFGGADILVNNAGTG 96 (263)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 34444444443322 578999988864
No 401
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=36.25 E-value=1.3e+02 Score=24.44 Aligned_cols=65 Identities=9% Similarity=0.047 Sum_probs=45.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 118 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s 118 (196)
.+|+||.-.+.....+++..+.+++.|+.+..... .-........++++....+.++||......
T Consensus 131 ~~vaii~~~d~~~~~~~~~~~~~~~~g~~v~~~~~-~~~~~~d~~~~l~~i~~~~~~vIv~~~~~~ 195 (389)
T 4gpa_A 131 NCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICV-ENFNDVSYRQLLEELDRRQEKKFVIDCEIE 195 (389)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHTTTCEEEEEEC-TTCCHHHHHHHHHHHHHHTCCEEEEECCHH
T ss_pred cEEEEEEecchhhHHHHHHHHHHHhcCceEEEEee-cCCcchhHHHHHHHhhccCCcEEEEEechh
Confidence 47999988777778888888888888987654433 333444556677777777777777665543
No 402
>1umq_A Photosynthetic apparatus regulatory protein; DNA-binding protein, response regulator, DNA binding domain, helix-turn-helix; NMR {Rhodobacter sphaeroides} SCOP: a.4.1.12
Probab=36.20 E-value=13 Score=26.28 Aligned_cols=21 Identities=14% Similarity=0.127 Sum_probs=18.5
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 029271 174 YAVKVLGIADEDLLERIRKYV 194 (196)
Q Consensus 174 ~AaqILa~~d~~l~~kl~~~r 194 (196)
-||++|+++...||.||+.|.
T Consensus 59 ~AA~~LGISR~TLyrKLkk~g 79 (81)
T 1umq_A 59 ETARRLNMHRRTLQRILAKRS 79 (81)
T ss_dssp HHHHHHTSCHHHHHHHHHTSS
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 478899999999999999874
No 403
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=36.10 E-value=30 Score=25.50 Aligned_cols=40 Identities=5% Similarity=0.022 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEE-EEcccCCchHHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALS 102 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~-V~SaHR~p~~~~~~~~~ 102 (196)
..=+.|+++.+.|++.|++|+.+ +..-.-+.+++.++++.
T Consensus 13 p~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~eL~~~l~~ 53 (121)
T 3rdw_A 13 PRCSKSRETLALVEQQGITPQVVLYLETPPSVDKLKELLQQ 53 (121)
T ss_dssp TTCHHHHHHHHHHHTTTCCCEEECTTTSCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCcEEEeeccCCCcHHHHHHHHHh
Confidence 44679999999999999999854 33334455666666554
No 404
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=36.05 E-value=1.7e+02 Score=23.55 Aligned_cols=78 Identities=10% Similarity=0.062 Sum_probs=61.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhC-----CCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFG-----VPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~g-----i~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~ 127 (196)
.+|..+.|- =|-..++.+...|..+. -+..++|.|.=-......++.+.+..-..+|+..+-|.++.-+.+++.
T Consensus 45 ~rii~l~g~-I~~~~a~~i~~~L~~l~~~~~~k~I~l~InSPGG~v~ag~~I~~~i~~~~~pV~t~v~G~AaS~G~~Ia~ 123 (218)
T 1y7o_A 45 DRIIMLTGP-VEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIAS 123 (218)
T ss_dssp TTEEEEESC-BCHHHHHHHHHHHHHHHHHCTTSCEEEEEEECCBCHHHHHHHHHHHHHSSSCEEEEEEEEEETHHHHHHT
T ss_pred CCEEEEeCE-ECHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCCCHHHHHHHHHHHHhcCCCEEEEEccEeHHHHHHHHH
Confidence 357666555 55567787777776543 257799999988888888888888877778999999999999999988
Q ss_pred ccCC
Q 029271 128 NSQI 131 (196)
Q Consensus 128 ~t~~ 131 (196)
-.++
T Consensus 124 a~d~ 127 (218)
T 1y7o_A 124 SGAK 127 (218)
T ss_dssp TSCT
T ss_pred cCCc
Confidence 8775
No 405
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=36.02 E-value=2e+02 Score=24.66 Aligned_cols=62 Identities=15% Similarity=0.268 Sum_probs=41.5
Q ss_pred eEEEEEcCCC--------------CHHHHHHHHHHHH-HhCCCeEEEEE-ccc--CCchHHHHHHHHHhhCCCeEEEEec
Q 029271 54 IVGIIMESDL--------------DLPVMNDAARTLS-DFGVPYEIKIL-PPH--QNCKEALSYALSAKERGIKIIIVGD 115 (196)
Q Consensus 54 ~V~IimGS~S--------------D~~~~~~~~~~l~-~~gi~~ev~V~-SaH--R~p~~~~~~~~~~e~~~~~V~IavA 115 (196)
-|-|=+|+.+ |...+.++.+.+. ..++|..+++. +.- .+.+.+.++++.+++.|++.|+.-+
T Consensus 86 ~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~ 165 (350)
T 3b0p_A 86 EINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHA 165 (350)
T ss_dssp EEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEec
Confidence 5777777765 4556666666665 46888877553 221 1224688899999999998776644
No 406
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=35.87 E-value=1.1e+02 Score=26.75 Aligned_cols=50 Identities=20% Similarity=0.185 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHH--------hCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEe
Q 029271 64 DLPVMNDAARTLSD--------FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 114 (196)
Q Consensus 64 D~~~~~~~~~~l~~--------~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~Iav 114 (196)
|-+.+.++.+.+.+ ..+|.-+++. ..-+.+++.++++.+++.|++-|++.
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~-p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIA-PDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEEC-SCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 44555555555432 5788888875 55666788999999999999877765
No 407
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=35.84 E-value=1.3e+02 Score=24.11 Aligned_cols=26 Identities=12% Similarity=0.142 Sum_probs=15.0
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
+++++|+|+++ .+...+++.|-+-|.
T Consensus 28 ~k~vlVTGas~--gIG~aia~~la~~G~ 53 (269)
T 4dmm_A 28 DRIALVTGASR--GIGRAIALELAAAGA 53 (269)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 46777777765 334455555555554
No 408
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=35.80 E-value=1.2e+02 Score=25.14 Aligned_cols=58 Identities=9% Similarity=0.034 Sum_probs=31.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCC--eEEEEEcccC--------CchHHHHHHHHHhhC-CCeEEE
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVP--YEIKILPPHQ--------NCKEALSYALSAKER-GIKIII 112 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~--~ev~V~SaHR--------~p~~~~~~~~~~e~~-~~~V~I 112 (196)
|.++-++| ++.+...++.+.+++.|.+ .|+.+.|.+. .++.+.++++...+. +..|++
T Consensus 95 p~~~~i~g--~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~v 163 (311)
T 1jub_A 95 PIFFSIAG--MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGV 163 (311)
T ss_dssp CCEEEECC--SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEE
T ss_pred CEEEEcCC--CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 34444444 4566666666666666665 5666655542 555556666655433 334444
No 409
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=35.79 E-value=32 Score=24.76 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEc-ccCCchHHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALS 102 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~V~S-aHR~p~~~~~~~~~ 102 (196)
+.=+.|+++.+.|++.|++|+.+=.. -.-+.+++.++++.
T Consensus 8 ~~C~~C~kak~~L~~~gi~~~~~di~~~~~~~~~l~~~~~~ 48 (114)
T 1rw1_A 8 KACDTMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAE 48 (114)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCceEEEeecCCCCCHHHHHHHHHh
Confidence 45589999999999999999765443 22334777777653
No 410
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=35.72 E-value=1.3e+02 Score=24.63 Aligned_cols=26 Identities=8% Similarity=0.112 Sum_probs=15.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|.+-|.
T Consensus 34 ~k~vlVTGas~--gIG~aia~~L~~~G~ 59 (291)
T 3cxt_A 34 GKIALVTGASY--GIGFAIASAYAKAGA 59 (291)
T ss_dssp TCEEEEETCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 46777777776 344555555655554
No 411
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=35.63 E-value=1.7e+02 Score=23.31 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=41.0
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc--------------CCchHHHHHHHHHhhC--CCeEEEEecC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------QNCKEALSYALSAKER--GIKIIIVGDG 116 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH--------------R~p~~~~~~~~~~e~~--~~~V~IavAG 116 (196)
.++++|+|+++ .+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..++ .++++|-.||
T Consensus 21 ~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg 96 (253)
T 2nm0_A 21 SRSVLVTGGNR--GIGLAIARAFADAGD--KVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAG 96 (253)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECS
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 57999999988 566778888888885 34333211 2245566666655432 4699999998
Q ss_pred CC
Q 029271 117 VE 118 (196)
Q Consensus 117 ~s 118 (196)
..
T Consensus 97 ~~ 98 (253)
T 2nm0_A 97 VT 98 (253)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 412
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=35.59 E-value=1.3e+02 Score=22.40 Aligned_cols=78 Identities=9% Similarity=0.037 Sum_probs=38.1
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCC--eEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhh-cc
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVP--YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-NS 129 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~--~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~-~t 129 (196)
-+++|++|+.. . +.+...|+.+|+. ++.-+.+.-.-|+...++++++.-..-+++...-+ ...+.++ ..
T Consensus 85 ~~v~ivT~~~~-~---~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~----~~Di~~a~~a 156 (187)
T 2wm8_A 85 VPGAAASRTSE-I---EGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDE----RRNIVDVSKL 156 (187)
T ss_dssp CCEEEEECCSC-H---HHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESC----HHHHHHHHTT
T ss_pred ceEEEEeCCCC-h---HHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCC----ccChHHHHHc
Confidence 37999998853 2 3345567888886 55433333333444444444432111134444433 2222222 23
Q ss_pred CCcEEEecC
Q 029271 130 QILVIRVPL 138 (196)
Q Consensus 130 ~~PVIgvP~ 138 (196)
-.++|+|+.
T Consensus 157 G~~~i~v~~ 165 (187)
T 2wm8_A 157 GVTCIHIQN 165 (187)
T ss_dssp TCEEEECSS
T ss_pred CCEEEEECC
Confidence 445666654
No 413
>1ntc_A Protein (nitrogen regulation protein (NTRC)); helix-turn-helix, FIS, four-helix bundle, transcription regulation; NMR {Salmonella typhimurium} SCOP: a.4.1.12
Probab=35.54 E-value=20 Score=25.08 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=19.1
Q ss_pred HHHHHHccCCHHHHHHHHHHHh
Q 029271 174 YAVKVLGIADEDLLERIRKYVE 195 (196)
Q Consensus 174 ~AaqILa~~d~~l~~kl~~~r~ 195 (196)
.||+.|+++..-|+.||+.|.-
T Consensus 69 ~aA~~LGIsr~tL~rklkk~~i 90 (91)
T 1ntc_A 69 EAARLLGWGAATLTAKLKELGM 90 (91)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHHHhCc
Confidence 4688999999999999998853
No 414
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=35.44 E-value=1.4e+02 Score=23.36 Aligned_cols=60 Identities=13% Similarity=0.201 Sum_probs=34.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCch------------------------HHHHHHHHHhhC--
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCK------------------------EALSYALSAKER-- 106 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~------------------------~~~~~~~~~e~~-- 106 (196)
.++++|+|+++- +...+.+.|.+-|. .+-+ ..|.++ .+.+++++..++
T Consensus 9 ~k~vlITGas~g--IG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 9 GKVALITGAGSG--FGEGMAKRFAKGGA--KVVI--VDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCC--EEEE--EcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 578888888764 44556666666664 2222 234443 344444444322
Q ss_pred CCeEEEEecCCC
Q 029271 107 GIKIIIVGDGVE 118 (196)
Q Consensus 107 ~~~V~IavAG~s 118 (196)
.++++|-.||..
T Consensus 83 ~id~li~~Ag~~ 94 (261)
T 3n74_A 83 KVDILVNNAGIG 94 (261)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCccC
Confidence 568888888864
No 415
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=35.30 E-value=56 Score=24.07 Aligned_cols=39 Identities=10% Similarity=0.052 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccc-CCchHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIKILPPH-QNCKEALSYAL 101 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~V~SaH-R~p~~~~~~~~ 101 (196)
+.=+.|+++...|++.|++|+.+=..-+ -+.+++.++.+
T Consensus 9 ~~C~~C~ka~~~L~~~gi~y~~~di~~~~~~~~el~~~l~ 48 (132)
T 1z3e_A 9 PSCTSCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILR 48 (132)
T ss_dssp TTCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHcCCceEEEEccCCCccHHHHHHHHH
Confidence 4558999999999999999986543322 23345555543
No 416
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.28 E-value=1.5e+02 Score=23.07 Aligned_cols=63 Identities=5% Similarity=-0.059 Sum_probs=40.9
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc---------------CCchHHHHHHHHHhh----CCCeEEE
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------------QNCKEALSYALSAKE----RGIKIII 112 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH---------------R~p~~~~~~~~~~e~----~~~~V~I 112 (196)
..++++|+|+++ .+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..+ .+++++|
T Consensus 6 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRG--ALGSRCVQAFRARNW--WVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTS--HHHHHHHHHHHTTTC--EEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHhCCC--EEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 357899999988 567788888888785 34333211 113445555555433 3579999
Q ss_pred EecCCC
Q 029271 113 VGDGVE 118 (196)
Q Consensus 113 avAG~s 118 (196)
-.||..
T Consensus 82 ~~Ag~~ 87 (241)
T 1dhr_A 82 CVAGGW 87 (241)
T ss_dssp ECCCCC
T ss_pred Eccccc
Confidence 999964
No 417
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=35.21 E-value=79 Score=19.50 Aligned_cols=22 Identities=14% Similarity=0.224 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHHHHhCCCeEEE
Q 029271 64 DLPVMNDAARTLSDFGVPYEIK 85 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~ 85 (196)
.=+.|+++...|+++|++|+..
T Consensus 10 ~C~~C~~~~~~l~~~~i~~~~~ 31 (75)
T 1r7h_A 10 ACVQCTATKKALDRAGLAYNTV 31 (75)
T ss_dssp TCHHHHHHHHHHHHTTCCCEEE
T ss_pred CChHHHHHHHHHHHcCCCcEEE
Confidence 4489999999999999998754
No 418
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=35.21 E-value=18 Score=33.78 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=32.8
Q ss_pred CCchHHHHHHHHHhhCCCeEEEEecCCCC-chhHhhhh-----ccCCcEEEecCC
Q 029271 91 QNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAA-----NSQILVIRVPLL 139 (196)
Q Consensus 91 R~p~~~~~~~~~~e~~~~~V~IavAG~sa-~L~gvvA~-----~t~~PVIgvP~~ 139 (196)
|.+....++++++++.+++.+|++.|-.. .-+-.++- ...+||||+|-.
T Consensus 173 R~~~~~~~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkT 227 (487)
T 2hig_A 173 RGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKT 227 (487)
T ss_dssp CSCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEecccc
Confidence 44455678889999999988888877532 21222321 136899999975
No 419
>3f6d_A Adgstd4-4, glutathione transferase GST1-4; HET: GTX; 1.70A {Anopheles dirus} PDB: 3f63_A* 1jlw_A* 3g7i_A* 3g7j_A*
Probab=35.19 E-value=59 Score=24.65 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcccCC
Q 029271 65 LPVMNDAARTLSDFGVPYEIKILPPHQN 92 (196)
Q Consensus 65 ~~~~~~~~~~l~~~gi~~ev~V~SaHR~ 92 (196)
-+.++++.-.|++.|++|+.........
T Consensus 9 s~~~~~v~~~L~~~gi~ye~~~v~~~~~ 36 (219)
T 3f6d_A 9 SAPCRAVQMTAAAVGVELNLKLTNLMAG 36 (219)
T ss_dssp CHHHHHHHHHHHHHTCCCEEEECCTTTT
T ss_pred CCchHHHHHHHHHcCCCceEEEccCccc
Confidence 3789999999999999999887765443
No 420
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=35.11 E-value=1.5e+02 Score=22.69 Aligned_cols=74 Identities=14% Similarity=0.128 Sum_probs=43.3
Q ss_pred CCeEEEEEcCC-----CCHHHHHHHHHHHHHhCCCeE-EEEEcccCCchHHHHHHHHHhh-CCCeEEEEecCCCCc----
Q 029271 52 APIVGIIMESD-----LDLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAH---- 120 (196)
Q Consensus 52 ~~~V~IimGS~-----SD~~~~~~~~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~~e~-~~~~V~IavAG~sa~---- 120 (196)
.++|+||+=|+ -|.. ..-++..|+++|+... ..+. --.++.+.+-++++-+ .+++++|+-.|.+-+
T Consensus 13 ~~rv~Ii~tGdElg~i~Dsn-~~~l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~ 89 (169)
T 1y5e_A 13 EVRCKIVTISDTRTEETDKS-GQLLHELLKEAGHKVTSYEIV--KDDKESIQQAVLAGYHKEDVDVVLTNGGTGITKRDV 89 (169)
T ss_dssp CCEEEEEEECSSCCTTTCHH-HHHHHHHHHHHTCEEEEEEEE--CSSHHHHHHHHHHHHTCTTCSEEEEECCCSSSTTCC
T ss_pred CCEEEEEEEcCccCeeccCh-HHHHHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCC
Confidence 46888888443 3433 2346777899998643 2333 2344555555555443 267999988877543
Q ss_pred hhHhhhhc
Q 029271 121 LSGVAAAN 128 (196)
Q Consensus 121 L~gvvA~~ 128 (196)
.+-+++..
T Consensus 90 t~ea~~~~ 97 (169)
T 1y5e_A 90 TIEAVSAL 97 (169)
T ss_dssp HHHHHHTT
T ss_pred cHHHHHHH
Confidence 44555443
No 421
>1eto_A FIS, factor for inversion stimulation; transcriptional activation region, DNA-binding protein, transcription activator; 1.90A {Escherichia coli} SCOP: a.4.1.12 PDB: 1etq_A 1ety_A 1fia_A 3fis_A 3iv5_A* 3jr9_A* 3jra_A* 3jrb_A* 3jrc_A* 3jrd_A* 3jre_A* 3jrf_A* 3jrg_A* 3jrh_A* 3jri_A* 1f36_A 1etv_A 1etk_A 1etx_A 1fip_A ...
Probab=35.03 E-value=18 Score=26.20 Aligned_cols=21 Identities=29% Similarity=0.494 Sum_probs=18.7
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 029271 174 YAVKVLGIADEDLLERIRKYV 194 (196)
Q Consensus 174 ~AaqILa~~d~~l~~kl~~~r 194 (196)
-||++|+++..-|+.||+.|.
T Consensus 76 ~AA~~LGIsR~TL~rkLkk~g 96 (98)
T 1eto_A 76 RAALMMGINRGTLRKKLKKYG 96 (98)
T ss_dssp HHHHHHTSCHHHHHHHHHHTT
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 468899999999999999885
No 422
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=34.97 E-value=1.4e+02 Score=22.28 Aligned_cols=50 Identities=24% Similarity=0.258 Sum_probs=34.4
Q ss_pred CCHHHHHHHHHHHHHh-CCCeEEEEEcccC---------------------CchH--HHHHHHHHhhCCCeEEE
Q 029271 63 LDLPVMNDAARTLSDF-GVPYEIKILPPHQ---------------------NCKE--ALSYALSAKERGIKIII 112 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~-gi~~ev~V~SaHR---------------------~p~~--~~~~~~~~e~~~~~V~I 112 (196)
.+.+..+++.+.++++ |+...+.+...|. +.++ +.++.+.+++.|..+.|
T Consensus 107 ~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 107 ADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CSHHHHHHHHHHHHHSSSCCSEEEEEECCC------------------CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 4588889999999999 8622344333332 1345 78888888888888776
No 423
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=34.87 E-value=1.1e+02 Score=23.71 Aligned_cols=44 Identities=16% Similarity=0.137 Sum_probs=27.7
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHH
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 101 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~ 101 (196)
..+.++|+|+++- +...+.+.|.+-|. .+. -.-|.++++.++.+
T Consensus 13 ~~k~vlVTGas~g--IG~~~a~~l~~~G~--~V~--~~~r~~~~~~~~~~ 56 (249)
T 3f9i_A 13 TGKTSLITGASSG--IGSAIARLLHKLGS--KVI--ISGSNEEKLKSLGN 56 (249)
T ss_dssp TTCEEEETTTTSH--HHHHHHHHHHHTTC--EEE--EEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCh--HHHHHHHHHHHCCC--EEE--EEcCCHHHHHHHHH
Confidence 4578899998874 56677777777774 332 23455555554433
No 424
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=34.87 E-value=16 Score=30.90 Aligned_cols=80 Identities=18% Similarity=0.206 Sum_probs=50.7
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE-ccc-----CCchHHHHHH----HHHhhCCCe-EEEEecCCCC-c
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-PPH-----QNCKEALSYA----LSAKERGIK-IIIVGDGVEA-H 120 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~-SaH-----R~p~~~~~~~----~~~e~~~~~-V~IavAG~sa-~ 120 (196)
..|+|+=.+--=+.+++++.+.|....+-| +. ++| |+.+++.++. +.+++.|++ ++||+--.+. +
T Consensus 8 ~pIgvfDSGvGGLtv~~~i~~~lp~~~~iy---~~D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~~a 84 (268)
T 3out_A 8 RPIGVFDSGIGGLTIVKNLMSILPNEDIIY---FGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIA 84 (268)
T ss_dssp SCEEEEESSSTTHHHHHHHHHHCTTCCEEE---EECTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHCCCCcEEE---ecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHHHH
Confidence 359999888888999999887765443321 21 122 6666666554 456778996 4445444443 3
Q ss_pred hhHhhhhcc-CCcEEEe
Q 029271 121 LSGVAAANS-QILVIRV 136 (196)
Q Consensus 121 L~gvvA~~t-~~PVIgv 136 (196)
|. -+.... +.||||+
T Consensus 85 l~-~lr~~~~~iPvigi 100 (268)
T 3out_A 85 KD-IVQEIAKAIPVIDV 100 (268)
T ss_dssp HH-HHHHHHTTSCEEEH
T ss_pred HH-HHHHhcCCCCEEec
Confidence 44 445566 8999995
No 425
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=34.84 E-value=1.5e+02 Score=23.38 Aligned_cols=26 Identities=19% Similarity=0.257 Sum_probs=15.0
Q ss_pred chHHHHHHHHHhh--CCCeEEEEecCCC
Q 029271 93 CKEALSYALSAKE--RGIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~--~~~~V~IavAG~s 118 (196)
++.+.+++++..+ .+++++|-.||..
T Consensus 76 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 103 (267)
T 1iy8_A 76 EAQVEAYVTATTERFGRIDGFFNNAGIE 103 (267)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 3444444444432 2568888888864
No 426
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=34.79 E-value=1.7e+02 Score=23.09 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=15.6
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
++.+.+++++..++ .++++|-.||..
T Consensus 62 ~~~v~~~~~~~~~~~g~id~lvnnAg~~ 89 (254)
T 3kzv_A 62 DSVLKQLVNAAVKGHGKIDSLVANAGVL 89 (254)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHHHHHHHhcCCccEEEECCccc
Confidence 34444555444322 568999988874
No 427
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=34.78 E-value=1.3e+02 Score=23.60 Aligned_cols=91 Identities=12% Similarity=-0.049 Sum_probs=54.6
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHH-HhCCCeEEE-EEccc------------CCchHHHHHHHHHhhCCCeEEEEec-CC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLS-DFGVPYEIK-ILPPH------------QNCKEALSYALSAKERGIKIIIVGD-GV 117 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~-~~gi~~ev~-V~SaH------------R~p~~~~~~~~~~e~~~~~V~IavA-G~ 117 (196)
.+|.+|.||...-..-+++.+.+. .+.-.+++. +.... ..|+.+.++.++.+. ++.||-++ -=
T Consensus 7 mkIl~I~GS~r~~s~t~~la~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~--AD~iVi~tP~Y 84 (199)
T 4hs4_A 7 LHFVTLLGSLRKASFNAAVARALPEIAPEGIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIAT--ADAVVIVTPEY 84 (199)
T ss_dssp EEEEEEECCCSTTCHHHHHHHHHHHHCCTTEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHH--SSEEEEEECCB
T ss_pred CEEEEEEcCCCCCChHHHHHHHHHHHccCCCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHh--CCEEEEEcCcc
Confidence 389999999887666666666554 443335555 44432 235677788887776 55444443 33
Q ss_pred CCchhHhh------------hhccCCcEEEecCCCCCCCh
Q 029271 118 EAHLSGVA------------AANSQILVIRVPLLSEDWSE 145 (196)
Q Consensus 118 sa~L~gvv------------A~~t~~PVIgvP~~~~~~~G 145 (196)
....|+.+ .....+||.-+-++.+..+|
T Consensus 85 ~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~~g~ 124 (199)
T 4hs4_A 85 NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMIGG 124 (199)
T ss_dssp TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSSSCS
T ss_pred CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCCccc
Confidence 44444432 13466888877766544444
No 428
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=34.69 E-value=74 Score=24.92 Aligned_cols=113 Identities=10% Similarity=-0.027 Sum_probs=59.3
Q ss_pred eEEEEEcCCCCHHH---HHHHHHHHHHh-CCCeEEEEEcccCCchHHHHHHHHHhh--CCCeEEEEecCCCCchhHhhhh
Q 029271 54 IVGIIMESDLDLPV---MNDAARTLSDF-GVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVEAHLSGVAAA 127 (196)
Q Consensus 54 ~V~IimGS~SD~~~---~~~~~~~l~~~-gi~~ev~V~SaHR~p~~~~~~~~~~e~--~~~~V~IavAG~sa~L~gvvA~ 127 (196)
+|+++.|...+... .+-..+.|++. |+++...+. ..-+++...+.++++-. ...+.|++.....+ -|++.+
T Consensus 137 ~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~~a--~g~~~a 213 (293)
T 3l6u_A 137 RIVEITGTANVYTTNERHRGFLKGIENEPTLSIVDSVS-GNYDPVTSERVMRQVIDSGIPFDAVYCHNDDIA--MGVLEA 213 (293)
T ss_dssp EEEEEECSTTCHHHHHHHHHHHHHHTTCTTEEEEEEEE-CTTCHHHHHHHHHHHHHTTCCCSEEEESSHHHH--HHHHHH
T ss_pred eEEEEECCCCCchHHHHHHHHHHHHHhCCCcEEeeecc-CCCCHHHHHHHHHHHHHhCCCCCEEEECCchHH--HHHHHH
Confidence 89999987766543 34455666777 887654433 33455665555555533 34577877543321 123322
Q ss_pred -----ccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHH
Q 029271 128 -----NSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKV 178 (196)
Q Consensus 128 -----~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqI 178 (196)
..++.|||+ ++.. ++...+|.|.+.+||..+ ++.-|..|+++
T Consensus 214 l~~~g~~di~vig~-------d~~~-~~~~~~~~~~~lttv~~~-~~~~g~~a~~~ 260 (293)
T 3l6u_A 214 LKKAKISGKIVVGI-------DGNR-AILEAVDMKSMDATVVQS-AEEMMKVAFSA 260 (293)
T ss_dssp HHHTTCCCCEEEEE-------ECCH-HHHHHHHTTSSCEEEECC-HHHHHHHHHHH
T ss_pred HHhCCCCCeEEEEe-------cCCH-HHHHHHHcCCccEEEeCC-HHHHHHHHHHH
Confidence 235556554 1222 222223456567888544 44444444443
No 429
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=34.68 E-value=1.6e+02 Score=23.38 Aligned_cols=26 Identities=4% Similarity=0.026 Sum_probs=15.0
Q ss_pred CchHHHHHHHHHhhC--CCeEEEEecCC
Q 029271 92 NCKEALSYALSAKER--GIKIIIVGDGV 117 (196)
Q Consensus 92 ~p~~~~~~~~~~e~~--~~~V~IavAG~ 117 (196)
.++.+.+++++..++ .++++|-.||.
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 92 (258)
T 3oid_A 65 QPAKIKEMFQQIDETFGRLDVFVNNAAS 92 (258)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 445555555544322 45788888874
No 430
>3bby_A Uncharacterized GST-like protein YFCF; NP_416804.1, glutathione S-transferase, N-terminal domain, S genomics; 1.85A {Escherichia coli}
Probab=34.52 E-value=52 Score=24.98 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=22.1
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccc
Q 029271 64 DLPVMNDAARTLSDFGVPYEIKILPPH 90 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~V~SaH 90 (196)
--+.++++.-.|++.|++|+.......
T Consensus 16 ~s~~~~~v~~~l~~~gi~~e~~~v~~~ 42 (215)
T 3bby_A 16 FSPYVLSAWVALQEKGLSFHIKTIDLD 42 (215)
T ss_dssp CCHHHHHHHHHHHHHTCCCEEEEEC--
T ss_pred CCcHHHHHHHHHHHcCCCCEEEEecCc
Confidence 458899999999999999998777653
No 431
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=34.51 E-value=1.4e+02 Score=23.75 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=14.9
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
++.+.+++++..++ +++++|-.||..
T Consensus 82 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 82 PDAPAELARRAAEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp TTHHHHHHHHHHHHHTSCSEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 34444444444322 568888888864
No 432
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=34.42 E-value=7.7 Score=32.92 Aligned_cols=81 Identities=21% Similarity=0.170 Sum_probs=46.3
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-----cCCch----HHHHHHHHHhhCCCe-EEEEecCCCC-chh
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-----HQNCK----EALSYALSAKERGIK-IIIVGDGVEA-HLS 122 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa-----HR~p~----~~~~~~~~~e~~~~~-V~IavAG~sa-~L~ 122 (196)
.|+|+=|+-..+.+.+++.+.+-.-.+-|- --.+ -|+.+ ++.+.++.+++.|++ |+|++-..++ +|.
T Consensus 26 ~IGvfDsG~Ggltv~~~i~~~~P~~~~iy~--~D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas~~~l~ 103 (290)
T 2vvt_A 26 AIGLIDSGVGGLTVLKEALKQLPNERLIYL--GDTARCPYGPRPAEQVVQFTWEMADFLLKKRIKMLVIACNTATAVALE 103 (290)
T ss_dssp CEEEEESSSTTHHHHHHHHHHCTTSCEEEE--ECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHH
T ss_pred cEEEEeCCCcHHHHHHHHHHHCCCccEEEe--cccccCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchhHHHHH
Confidence 699993334458899998887643321110 0011 13344 444555666777886 5555554442 344
Q ss_pred HhhhhccCCcEEEec
Q 029271 123 GVAAANSQILVIRVP 137 (196)
Q Consensus 123 gvvA~~t~~PVIgvP 137 (196)
-+......||||+.
T Consensus 104 -~lr~~~~iPVigii 117 (290)
T 2vvt_A 104 -EIKAALPIPVVGVI 117 (290)
T ss_dssp -HHHHHCSSCEEESS
T ss_pred -HHHHhCCCCEEccc
Confidence 44456789999953
No 433
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=34.40 E-value=1.5e+02 Score=23.10 Aligned_cols=53 Identities=11% Similarity=0.154 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhh--CCCeEEEEecCCC
Q 029271 65 LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVE 118 (196)
Q Consensus 65 ~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~--~~~~V~IavAG~s 118 (196)
.+..++..+.++..|..+....+- -..++.+.+++++..+ .+++++|-.||..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 39 EQKANEVVDEIKKLGSDAIAVRAD-VANAEDVTNMVKQTVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECC-TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEEcC-CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 344444444444444333222111 1344555555554433 2568888888854
No 434
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=34.35 E-value=1.6e+02 Score=22.67 Aligned_cols=25 Identities=12% Similarity=0.268 Sum_probs=14.4
Q ss_pred hHHHHHHHHHhh--CCCeEEEEecCCC
Q 029271 94 KEALSYALSAKE--RGIKIIIVGDGVE 118 (196)
Q Consensus 94 ~~~~~~~~~~e~--~~~~V~IavAG~s 118 (196)
+.+.+++++..+ .+++++|-.||..
T Consensus 65 ~~~~~~~~~~~~~~~~id~li~~Ag~~ 91 (250)
T 2cfc_A 65 GDVNAAIAATMEQFGAIDVLVNNAGIT 91 (250)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 344444443332 2578899888864
No 435
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=34.11 E-value=88 Score=25.98 Aligned_cols=61 Identities=7% Similarity=0.030 Sum_probs=49.3
Q ss_pred HHHhCCCeEEEEE--c--ccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcEEEe
Q 029271 75 LSDFGVPYEIKIL--P--PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 136 (196)
Q Consensus 75 l~~~gi~~ev~V~--S--aHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIgv 136 (196)
++.||+... .+. + .=-+|.++.++++..+++++++|+.=...+.-+.-.+|..+..||..+
T Consensus 188 ~~~yGl~~~-~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l 252 (284)
T 2prs_A 188 EKQFGLTPL-GHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTL 252 (284)
T ss_dssp HHHHTCCCC-EEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred HHHCCCeEe-EeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEe
Confidence 368999742 232 2 235678999999999999999999999999999999999999999765
No 436
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=34.05 E-value=67 Score=27.12 Aligned_cols=82 Identities=7% Similarity=-0.001 Sum_probs=52.5
Q ss_pred CeEEEEE-cCCCCHHHHHHHHHHHHH--hCCCeEEEEEc-ccC--------CchHHHHHHHHHhhCCCeEEEEecCCCCc
Q 029271 53 PIVGIIM-ESDLDLPVMNDAARTLSD--FGVPYEIKILP-PHQ--------NCKEALSYALSAKERGIKIIIVGDGVEAH 120 (196)
Q Consensus 53 ~~V~Iim-GS~SD~~~~~~~~~~l~~--~gi~~ev~V~S-aHR--------~p~~~~~~~~~~e~~~~~V~IavAG~sa~ 120 (196)
.+|+||+ +|.-|.+..+.+.+.|+. +|.. +.+.. +.+ .-+|..++.+.+.+..++.|+++-|+.+.
T Consensus 4 ~~I~ivaPSs~~~~~~~~~~~~~l~~~~~G~~--v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 81 (274)
T 3g23_A 4 RRIAICAPSTPFTREDSARVIALAAAEFPDLS--LSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGYGA 81 (274)
T ss_dssp EEEEEECSSSCCCHHHHHHHHHHHHHHCTTEE--EEECGGGGCCSSSSSSCHHHHHHHHHHHHTCTTCSEEEESCCSSCT
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHhccCCeE--EEECcchhhccCccCCCHHHHHHHHHHHhhCCCCCEEEEeeccccH
Confidence 3788887 455577788888888887 5864 43321 111 12567777777777788999999998554
Q ss_pred --hhHhh-----hhccCCcEEEe
Q 029271 121 --LSGVA-----AANSQILVIRV 136 (196)
Q Consensus 121 --L~gvv-----A~~t~~PVIgv 136 (196)
|=.-+ ....+++.+|.
T Consensus 82 ~rlL~~lD~~~i~~~~PK~~~Gy 104 (274)
T 3g23_A 82 NRIAEDALARLGRAASAKQYLGY 104 (274)
T ss_dssp HHHHHHHHTTCCGGGGGCEEEEC
T ss_pred HHHHHhhhhhhhhhhCCcEEEEe
Confidence 33332 12345667663
No 437
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=34.04 E-value=1.7e+02 Score=22.84 Aligned_cols=114 Identities=7% Similarity=-0.088 Sum_probs=60.1
Q ss_pred CeEEEEE----cCCCC---HHHHHHHHHHHHHhCCCeEEE-EEcccCCchHHHHHHHHHhh--CCCeEEEEecCCCCchh
Q 029271 53 PIVGIIM----ESDLD---LPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVEAHLS 122 (196)
Q Consensus 53 ~~V~Iim----GS~SD---~~~~~~~~~~l~~~gi~~ev~-V~SaHR~p~~~~~~~~~~e~--~~~~V~IavAG~sa~L~ 122 (196)
.+|++++ |.... ....+-..+.|++.|+++++. +.....+.+...+.++++-. ...+.|++.... ++
T Consensus 136 ~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~--a~- 212 (304)
T 3gbv_A 136 REIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHADLNIEDSRMLDDFFREHPDVKHGITFNSK--VY- 212 (304)
T ss_dssp SEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEESSCSSCHHHHHHHHHHHCTTCCEEEESSSC--TH-
T ss_pred CeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecCCCHHHHHHHHHHHHHhCCCeEEEEEcCcc--hH-
Confidence 6899999 43332 445566778888999987643 32333344444444333322 246888887765 44
Q ss_pred Hhhhhcc-----CCcEEEecCCCCCCChhhh-hhhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 029271 123 GVAAANS-----QILVIRVPLLSEDWSEDDV-INSIRMPSHVQVASVPRNNAKNAALYAVKVL 179 (196)
Q Consensus 123 gvvA~~t-----~~PVIgvP~~~~~~~G~DL-lS~lqmPsGvpvatV~I~~~~nAA~~AaqIL 179 (196)
|++.+.. .+.|||+ ++... ...+. +|+-.+||.. +++.-|..|+++|
T Consensus 213 g~~~al~~~g~~di~vig~-------d~~~~~~~~~~--~~~~~~tv~~-~~~~~g~~av~~l 265 (304)
T 3gbv_A 213 IIGEYLQQRRKSDFSLIGY-------DLLERNVTCLK--EGTVSFLIAQ-QPELQGFNSIKTL 265 (304)
T ss_dssp HHHHHHHHTTCCSCEEEEE-------SCCHHHHHHHH--HTSEEEEEEC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEEe-------CCCHHHHHHHH--cCceEEEEEe-CHHHHHHHHHHHH
Confidence 3444432 3444442 22222 33333 5553447744 4445555555543
No 438
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=34.03 E-value=1.7e+02 Score=24.05 Aligned_cols=27 Identities=15% Similarity=0.026 Sum_probs=18.5
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ .+...+++.|-+-|.
T Consensus 26 ~gk~vlVTGas~--GIG~aia~~la~~G~ 52 (322)
T 3qlj_A 26 DGRVVIVTGAGG--GIGRAHALAFAAEGA 52 (322)
T ss_dssp TTCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 457888888876 455666666766664
No 439
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.01 E-value=1.7e+02 Score=22.99 Aligned_cols=61 Identities=8% Similarity=0.113 Sum_probs=37.3
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCc---------------------hHHHHHHHHHhh--CCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC---------------------KEALSYALSAKE--RGI 108 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p---------------------~~~~~~~~~~e~--~~~ 108 (196)
..++++|+|+++ -+...+.+.|.+-|. ++.+. .|.+ +.+.+++++..+ .++
T Consensus 5 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 5 AGKGVLVTGGAR--GIGRAIAQAFAREGA--LVALC--DLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEE--eCChhHHHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 357888999887 556677777777774 34333 2332 333344443322 257
Q ss_pred eEEEEecCCC
Q 029271 109 KIIIVGDGVE 118 (196)
Q Consensus 109 ~V~IavAG~s 118 (196)
+++|-.||..
T Consensus 79 D~lv~~Ag~~ 88 (256)
T 2d1y_A 79 DVLVNNAAIA 88 (256)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999864
No 440
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=34.00 E-value=1.8e+02 Score=23.26 Aligned_cols=63 Identities=16% Similarity=0.219 Sum_probs=43.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---------------cCCchHHHHHHHHHhhC--CCeEEEEe
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------------HQNCKEALSYALSAKER--GIKIIIVG 114 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~Sa---------------HR~p~~~~~~~~~~e~~--~~~V~Iav 114 (196)
..++++|+|+++ -+...+++.|.+-|.. +-+.+- -..++.+.+++++..++ .++++|-.
T Consensus 13 ~~k~vlVTGas~--GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~n 88 (269)
T 3vtz_A 13 TDKVAIVTGGSS--GIGLAVVDALVRYGAK--VVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNN 88 (269)
T ss_dssp TTCEEEESSTTS--HHHHHHHHHHHHTTCE--EEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 468999999988 5677888888888864 222221 13345666666665443 57999999
Q ss_pred cCCC
Q 029271 115 DGVE 118 (196)
Q Consensus 115 AG~s 118 (196)
||..
T Consensus 89 Ag~~ 92 (269)
T 3vtz_A 89 AGIE 92 (269)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 9974
No 441
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=33.97 E-value=1.1e+02 Score=24.25 Aligned_cols=119 Identities=16% Similarity=0.142 Sum_probs=73.4
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCeE-EEEEcccCCchHHHHHHHHHh--hCCCeEEEEec----CCCCchh
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAK--ERGIKIIIVGD----GVEAHLS 122 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~~e--~~~~~V~IavA----G~sa~L~ 122 (196)
.+++||.+.-.+. .-.+.+.+.|++.|.+++ ++|-++.-.|-...++++... +..++.+||.. |..-|-=
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaLG~VIrG~T~Hfd 92 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFD 92 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEEEEEECCSSSTTH
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEeeeeecCCchHHH
Confidence 5899999998887 677889999999996655 578888877777766665321 14467777643 5555543
Q ss_pred Hhh----------hhccCCcEEEecCCCCCCChhhhhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 123 GVA----------AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 123 gvv----------A~~t~~PVIgvP~~~~~~~G~DLlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
-|. +-.+..||+..=....+. ..-+.-.. +. .-+.|..||..|.+++.+
T Consensus 93 ~Va~~v~~gl~~vsl~~~vPV~~GVLT~~~~--eQA~~Rag-~~-------~~nkG~eaA~aAlem~~l 151 (157)
T 2i0f_A 93 IVSNESCRALTDLSVEESIAIGNGILTVENE--EQAWVHAR-RE-------DKDKGGFAARAALTMIGL 151 (157)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEEESSH--HHHHHHHC-TT-------TTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEeCCCCH--HHHHHHhC-cc-------ccccHHHHHHHHHHHHHH
Confidence 222 124677777544332111 01111111 00 115788899999888765
No 442
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=33.78 E-value=26 Score=29.65 Aligned_cols=28 Identities=7% Similarity=-0.164 Sum_probs=18.6
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVP 81 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~ 81 (196)
++|.|| ++...-.-+.-..+.|+..|++
T Consensus 5 ~~vLiV-~g~~~~~~a~~l~~aL~~~g~~ 32 (259)
T 3rht_A 5 TRVLYC-GDTSLETAAGYLAGLMTSWQWE 32 (259)
T ss_dssp -CEEEE-ESSCTTTTHHHHHHHHHHTTCC
T ss_pred ceEEEE-CCCCchhHHHHHHHHHHhCCce
Confidence 478888 4444455566777788888864
No 443
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=33.75 E-value=1.1e+02 Score=29.68 Aligned_cols=66 Identities=20% Similarity=0.118 Sum_probs=48.6
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEE------cccC---CchHHHHHHHHHhhCCCeEEEEecCCCCch
Q 029271 55 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL------PPHQ---NCKEALSYALSAKERGIKIIIVGDGVEAHL 121 (196)
Q Consensus 55 V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~------SaHR---~p~~~~~~~~~~e~~~~~V~IavAG~sa~L 121 (196)
+.=|..|.+|++.+++..+.+++.|..++.-++ +++| +++.+.++++++++-|++. |+++=+.+.+
T Consensus 213 ~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~-I~l~DT~G~~ 287 (718)
T 3bg3_A 213 VFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHI-LCIKDMAGLL 287 (718)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSE-EEEECTTSCC
T ss_pred EEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCE-EEEcCcCCCc
Confidence 344456899999999999999999987665554 4476 5789999999999889864 3444444433
No 444
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=33.73 E-value=1.6e+02 Score=22.66 Aligned_cols=58 Identities=16% Similarity=0.082 Sum_probs=40.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEe
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 114 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~Iav 114 (196)
.+++.|++.+ ...++.+.+.|+..|+++.. ...-...++-.+.++.+.+....|+|+-
T Consensus 54 ~~~~lVF~~~---~~~~~~l~~~L~~~g~~~~~--lhg~~~~~~R~~~l~~F~~g~~~vLvaT 111 (191)
T 2p6n_A 54 PPPVLIFAEK---KADVDAIHEYLLLKGVEAVA--IHGGKDQEERTKAIEAFREGKKDVLVAT 111 (191)
T ss_dssp CSCEEEECSC---HHHHHHHHHHHHHHTCCEEE--ECTTSCHHHHHHHHHHHHHTSCSEEEEC
T ss_pred CCCEEEEECC---HHHHHHHHHHHHHcCCcEEE--EeCCCCHHHHHHHHHHHhcCCCEEEEEc
Confidence 4578888876 46778888889988886432 2233345666667788877777888874
No 445
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=33.70 E-value=21 Score=29.15 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=25.0
Q ss_pred HHHHHHHHHhhCCCeEE-EEecCCCCchhHhhhhccCCcEEEe
Q 029271 95 EALSYALSAKERGIKII-IVGDGVEAHLSGVAAANSQILVIRV 136 (196)
Q Consensus 95 ~~~~~~~~~e~~~~~V~-IavAG~sa~L~gvvA~~t~~PVIgv 136 (196)
.+.+.++..++.|++.| |++--.+..+ .-+...+..||||+
T Consensus 64 ~l~~~~~~L~~~g~~~iviaCNTa~~~~-~~l~~~~~iPvi~i 105 (231)
T 3ojc_A 64 LLSNAAISLKHAGAEVIVVCTNTMHKVA-DDIEAACGLPLLHI 105 (231)
T ss_dssp HHHHHHHHHHHHTCCEEEECSSGGGGGH-HHHHHHHCSCBCCH
T ss_pred HHHHHHHHHHhcCCCEEEEeCCchHHHH-HHHHHhCCCCEecc
Confidence 44555566667788644 4444444444 55666778888886
No 446
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=33.47 E-value=78 Score=25.00 Aligned_cols=115 Identities=11% Similarity=0.037 Sum_probs=73.3
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCe----EEEEEcccCCchHHHHHHHHHhhCCCeEEEEec----CCCCch
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAHL 121 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~----ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA----G~sa~L 121 (196)
.+++|+.+.-.+. .-.+.+.+.|++.|+.. .++|-++.-.|-...++++ +.+++.+||.. |..-|-
T Consensus 12 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG~VIrG~T~Hf 88 (157)
T 2obx_A 12 VRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAE---TGRYGAVLGTAFVVNGGIYRH 88 (157)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---HTCCSEEEEEEECCCCSSBCC
T ss_pred CEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEeeccccCCCcHH
Confidence 4899999999888 77888999999999864 3578888777766655544 35578777754 444443
Q ss_pred hHh----------hhhccCCcEEEecCCCCCC-Chhh---hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 122 SGV----------AAANSQILVIRVPLLSEDW-SEDD---VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 122 ~gv----------vA~~t~~PVIgvP~~~~~~-~G~D---LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
=-| ++=.|..||+..=...... ...+ +... -..+.+..||..|.+++.+
T Consensus 89 d~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~eqa~eR~~~~~~-----------~~~nKG~eaA~aalem~~l 151 (157)
T 2obx_A 89 EFVASAVIDGMMNVQLSTGVPVLSAVLTPHNYHDSAEHHRFFFE-----------HFTVKGKEAARACVEILAA 151 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECBSCCCSCHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhhhhcc-----------hhcchHHHHHHHHHHHHHH
Confidence 222 1224778888763222111 1122 1111 0126788899999988765
No 447
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=33.25 E-value=92 Score=24.71 Aligned_cols=115 Identities=13% Similarity=0.159 Sum_probs=73.9
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCC-CeE-EEEEcccCCchHHHHHHHHHhhCCCeEEEEec----CCCCchhH
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGV-PYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAHLSG 123 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi-~~e-v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA----G~sa~L~g 123 (196)
.+++|+.+.-.+. .-.+.+.+.|++.|+ .++ ++|-++.-.|-...++++ .++.+||.. |..-|-=-
T Consensus 18 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~-----~yDavIaLG~VIrG~T~Hfd~ 92 (160)
T 2c92_A 18 VRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELAR-----NHDAVVALGVVIRGQTPHFDY 92 (160)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHT-----SCSEEEEEEEEECCSSTHHHH
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHh-----cCCEEEEEeeeecCCchHHHH
Confidence 5899999998888 778889999999998 444 578888877766655553 377777644 55555432
Q ss_pred hh----------hhccCCcEEEecCCCCCCChhh-hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 124 VA----------AANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 124 vv----------A~~t~~PVIgvP~~~~~~~G~D-LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
|. +=.|..|||..=....+ ++ -+. + .|.+- -.-+.+..||..|.+++.+
T Consensus 93 Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~---~eQA~~--R--ag~~~--~~~nKG~eaA~aalem~~l 152 (160)
T 2c92_A 93 VCDAVTQGLTRVSLDSSTPIANGVLTTNT---EEQALD--R--AGLPT--SAEDKGAQATVAALATALT 152 (160)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEESS---HHHHHT--T--BTCTT--CSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCEEEEEcCCCC---HHHHHH--H--hcccc--ccchhHHHHHHHHHHHHHH
Confidence 22 22478899877332211 11 111 1 12100 1126899999999998865
No 448
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=33.23 E-value=1.1e+02 Score=24.33 Aligned_cols=26 Identities=12% Similarity=0.126 Sum_probs=16.9
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+.+ .+...+.+.|-+-|.
T Consensus 8 ~k~~lVTGas~--GIG~aia~~l~~~G~ 33 (265)
T 3lf2_A 8 EAVAVVTGGSS--GIGLATVELLLEAGA 33 (265)
T ss_dssp TCEEEEETCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 46788888776 345556666666664
No 449
>3vln_A GSTO-1, glutathione S-transferase omega-1; GST fold, reductase; HET: ASC; 1.70A {Homo sapiens} PDB: 1eem_A* 3lfl_A*
Probab=33.21 E-value=55 Score=25.39 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcccCCchHH
Q 029271 64 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEA 96 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~ 96 (196)
.-+.++++.-.|++.|++|+.........+++.
T Consensus 31 ~sp~~~~v~~~L~~~gi~ye~~~v~~~~~~~~~ 63 (241)
T 3vln_A 31 FSPFAERTRLVLKAKGIRHEVININLKNKPEWF 63 (241)
T ss_dssp TCHHHHHHHHHHHHHTCCEEEEEBCTTSCCTTH
T ss_pred CCcHHHHHHHHHHHcCCCCeEEecCcccCCHHH
Confidence 348999999999999999998877665555444
No 450
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=33.19 E-value=99 Score=25.11 Aligned_cols=84 Identities=10% Similarity=0.008 Sum_probs=54.2
Q ss_pred CeEEEEEcCCCC-----HHHHHHHHHHHHHhC-----CCeEEEEEcccCCchHHHHHHHHHhh-CCCeEEEEecCCCCch
Q 029271 53 PIVGIIMESDLD-----LPVMNDAARTLSDFG-----VPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHL 121 (196)
Q Consensus 53 ~~V~IimGS~SD-----~~~~~~~~~~l~~~g-----i~~ev~V~SaHR~p~~~~~~~~~~e~-~~~~V~IavAG~sa~L 121 (196)
-+|+++.--+.. .+..+-+...+++.| .++++.+..-...|++..+.++++-. ++++.||...+.+...
T Consensus 17 i~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~ng~~~g~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~~~ 96 (375)
T 4evq_A 17 LKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVHSGVAM 96 (375)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHHHTTTEETTEEEEEEEEECTTCHHHHHHHHHCCCCCSCCSEEEECSSHHHHH
T ss_pred eEEEEEeCCCCcchhcCHHHHHHHHHHHHHhCCCcCCEEEEEEEecCCCCHHHHHHHHHHHHhcCCceEEEcCCccHHHH
Confidence 378888754322 234445556667764 45888888888899998888887765 4778777755433322
Q ss_pred hH-hhhhccCCcEEEe
Q 029271 122 SG-VAAANSQILVIRV 136 (196)
Q Consensus 122 ~g-vvA~~t~~PVIgv 136 (196)
+. -++....+|+|..
T Consensus 97 ~~~~~~~~~~iP~v~~ 112 (375)
T 4evq_A 97 AMVKIAREDGIPTIVP 112 (375)
T ss_dssp HHHHHHHHHCCCEEES
T ss_pred HHHHHHHHcCceEEec
Confidence 21 1234567899864
No 451
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=33.08 E-value=1.3e+02 Score=24.16 Aligned_cols=66 Identities=9% Similarity=0.064 Sum_probs=37.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc------------------------CCchHHHHHHHHHhhC-
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH------------------------QNCKEALSYALSAKER- 106 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH------------------------R~p~~~~~~~~~~e~~- 106 (196)
..++++|+|++|.-.+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGA--QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35788888887433466677777777674 33332210 1223344444444322
Q ss_pred -CCeEEEEecCCCC
Q 029271 107 -GIKIIIVGDGVEA 119 (196)
Q Consensus 107 -~~~V~IavAG~sa 119 (196)
+++++|-.||...
T Consensus 98 g~iD~lv~~Ag~~~ 111 (285)
T 2p91_A 98 GSLDIIVHSIAYAP 111 (285)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 5689999998653
No 452
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=32.96 E-value=1.7e+02 Score=22.56 Aligned_cols=61 Identities=13% Similarity=0.013 Sum_probs=35.0
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHH-HHhCCCeEEEEEcccC-----------CchHHHHHHHHHhhCCCeEEEEec
Q 029271 53 PIVGIIMESDLDLPVMNDAARTL-SDFGVPYEIKILPPHQ-----------NCKEALSYALSAKERGIKIIIVGD 115 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l-~~~gi~~ev~V~SaHR-----------~p~~~~~~~~~~e~~~~~V~IavA 115 (196)
.+|.||.||...-..-+++.+.+ +.+.-..++.+..... .++.+.++.++.+. ++.||-++
T Consensus 3 ~kilii~gS~r~~s~t~~la~~~~~~~~~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~--AD~iV~~s 75 (192)
T 3fvw_A 3 KRILFIVGSFSEGSFNRQLAKKAETIIGDRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQE--ADAIWIFS 75 (192)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHH--CSEEEEEC
T ss_pred CEEEEEEcCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHh--CCEEEEEC
Confidence 47999999987544444444333 3333224555555443 34567777777766 55555443
No 453
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=32.92 E-value=72 Score=25.60 Aligned_cols=79 Identities=16% Similarity=0.088 Sum_probs=44.8
Q ss_pred CCeEEEEE-cCC--CCHHHHHHHHHHHHHhCCCeEEEEEc-ccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh--
Q 029271 52 APIVGIIM-ESD--LDLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA-- 125 (196)
Q Consensus 52 ~~~V~Iim-GS~--SD~~~~~~~~~~l~~~gi~~ev~V~S-aHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv-- 125 (196)
.++|++|- +|. +.-++.+...+.|+++|+. +.+.. .++.+++..+.+++ ++.|+...|-...+--.+
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~--v~~~~i~~~~~~~~~~~l~~-----ad~I~l~GG~~~~l~~~L~~ 99 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLL--VEELDIATESLGEITTKLRK-----NDFIYVTGGNTFFLLQELKR 99 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE--EEECCTTTSCHHHHHHHHHH-----SSEEEECCSCHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe--EEEEEecCCChHHHHHHHHh-----CCEEEECCCCHHHHHHHHHH
Confidence 36888885 433 4457899999999999984 44442 12455555454443 444443335443332222
Q ss_pred -------hh--ccCCcEEEec
Q 029271 126 -------AA--NSQILVIRVP 137 (196)
Q Consensus 126 -------A~--~t~~PVIgvP 137 (196)
-- ..-.|++|.-
T Consensus 100 ~gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 100 TGADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp HTHHHHHHHHHHTTCEEEEET
T ss_pred CChHHHHHHHHHcCCeEEEEC
Confidence 11 1257888865
No 454
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=32.91 E-value=1.3e+02 Score=24.68 Aligned_cols=47 Identities=17% Similarity=0.241 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHH-hCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEE
Q 029271 64 DLPVMNDAARTLSD-FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 113 (196)
Q Consensus 64 D~~~~~~~~~~l~~-~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~Ia 113 (196)
|.....++.+.+++ .++|.-+++..- .....++++.+++.|++.|++
T Consensus 148 ~~~~~~eii~~v~~~~~~pv~vk~~~~---~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 148 DPEVAAALVKACKAVSKVPLYVKLSPN---VTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEECSC---SSCSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCC---hHHHHHHHHHHHHcCCCEEEE
Confidence 44555555555543 377766666521 123345556666667765555
No 455
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=32.91 E-value=1.8e+02 Score=22.98 Aligned_cols=27 Identities=7% Similarity=0.033 Sum_probs=17.1
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
..++++|+|+++ .+...+++.|.+-|.
T Consensus 7 ~~k~vlVTGas~--GIG~aia~~la~~G~ 33 (259)
T 3edm_A 7 TNRTIVVAGAGR--DIGRACAIRFAQEGA 33 (259)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 356777787776 345566666666664
No 456
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=32.76 E-value=1.6e+02 Score=23.30 Aligned_cols=83 Identities=13% Similarity=0.106 Sum_probs=45.9
Q ss_pred eEEEEEcCCCC----HHHHHHHHHHHHHh-CCCeEEEEEcccCC--------------------c--hHHHHHHHHHhhC
Q 029271 54 IVGIIMESDLD----LPVMNDAARTLSDF-GVPYEIKILPPHQN--------------------C--KEALSYALSAKER 106 (196)
Q Consensus 54 ~V~IimGS~SD----~~~~~~~~~~l~~~-gi~~ev~V~SaHR~--------------------p--~~~~~~~~~~e~~ 106 (196)
+|.||.||... ...++.+.+.|++- |.++ .+...... + +.+.++.++..+
T Consensus 3 kIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v--~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~- 79 (242)
T 1sqs_A 3 KIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDI--SFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLE- 79 (242)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEE--EEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHH-
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeE--EEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHH-
Confidence 69999999753 34455566666665 8754 44443321 1 566677776665
Q ss_pred CCeEEEEec-----CCCCchhHhhhh---------ccCCcEEEecCCC
Q 029271 107 GIKIIIVGD-----GVEAHLSGVAAA---------NSQILVIRVPLLS 140 (196)
Q Consensus 107 ~~~V~IavA-----G~sa~L~gvvA~---------~t~~PVIgvP~~~ 140 (196)
++.||-++ +.++.|=.++-- ...+|++-+-+.+
T Consensus 80 -AD~iI~~sP~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g 126 (242)
T 1sqs_A 80 -SDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAE 126 (242)
T ss_dssp -CSEEEEEEEECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEES
T ss_pred -CCEEEEEccccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCC
Confidence 55444443 334444333321 3456776554443
No 457
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=32.69 E-value=2.4e+02 Score=24.26 Aligned_cols=82 Identities=11% Similarity=0.069 Sum_probs=55.3
Q ss_pred CCeEEEEEcCCCCHHHHHH----HHHHHHHhCCCeEE--EEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCchhHhh
Q 029271 52 APIVGIIMESDLDLPVMND----AARTLSDFGVPYEI--KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 125 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~----~~~~l~~~gi~~ev--~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvv 125 (196)
+.+|+.|.|... +...+ -...+++.+.++++ ...+..-.|+.-.+..+++-++|++||.+.+|.. |++
T Consensus 149 ~~kIGfVgg~~~--p~v~~~~~GF~~G~k~~np~i~v~~~~~g~~~d~~kg~~~a~~l~~~G~DvIf~~~d~~----Gv~ 222 (356)
T 3s99_A 149 KGIAGYIGSVPV--PEVVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPGKEADAAKALIDQGVDIITQHTDST----AAI 222 (356)
T ss_dssp SCEEEEEECCCC--HHHHHHHHHHHHHHHTTCTTCEEEEEECSSSCCHHHHHHHHHHHHHTTCSEEEESSSSS----HHH
T ss_pred CCEEEEECCCcc--HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCChHHHHHHHHHHHhCCCcEEEECCCch----HHH
Confidence 568999998754 33322 23344556666554 4455566788888999888888999999999875 444
Q ss_pred hh--ccCCcEEEecCC
Q 029271 126 AA--NSQILVIRVPLL 139 (196)
Q Consensus 126 A~--~t~~PVIgvP~~ 139 (196)
.+ ...+-|||+--.
T Consensus 223 ~aa~e~Gv~vIG~D~d 238 (356)
T 3s99_A 223 QVAHDRGIKAFGQASD 238 (356)
T ss_dssp HHHHHTTCEEEEEESC
T ss_pred HHHHHcCCEEEEEcCc
Confidence 33 245678887543
No 458
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=32.66 E-value=1.1e+02 Score=26.18 Aligned_cols=51 Identities=16% Similarity=0.136 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCC
Q 029271 67 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 118 (196)
Q Consensus 67 ~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~s 118 (196)
..+ +...+.++|++.-.+++.--++.+++.+++..+...|++=|.+..|=-
T Consensus 60 t~~-~a~~i~~~g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~niLaLrGD~ 110 (310)
T 3apt_A 60 SVA-WAQRIQSLGLNPLAHLTVAGQSRKEVAEVLHRFVESGVENLLALRGDP 110 (310)
T ss_dssp HHH-HHHHHHHTTCCBCEEEECTTSCHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred HHH-HHHHHHHhCCCeEEEeecCCCCHHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 444 444445899999999999999999999999999999998777777763
No 459
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=32.55 E-value=1.1e+02 Score=24.49 Aligned_cols=63 Identities=11% Similarity=0.040 Sum_probs=37.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc--------------------CCchHHHHHHHHHhhC--CCe
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------------QNCKEALSYALSAKER--GIK 109 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH--------------------R~p~~~~~~~~~~e~~--~~~ 109 (196)
.+++++|+|+++- +...+++.|.+-|.. +-+++-. ..++.+.+++++..++ +++
T Consensus 26 ~~k~vlVTGas~g--IG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 101 (260)
T 3gem_A 26 SSAPILITGASQR--VGLHCALRLLEHGHR--VIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR 101 (260)
T ss_dssp -CCCEEESSTTSH--HHHHHHHHHHHTTCC--EEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CCCEEEEECCCCH--HHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3578888988874 566777777777753 3222211 1233444555544332 468
Q ss_pred EEEEecCCC
Q 029271 110 IIIVGDGVE 118 (196)
Q Consensus 110 V~IavAG~s 118 (196)
++|-.||..
T Consensus 102 ~lv~nAg~~ 110 (260)
T 3gem_A 102 AVVHNASEW 110 (260)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCcc
Confidence 999988853
No 460
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=32.45 E-value=1.5e+02 Score=24.23 Aligned_cols=12 Identities=25% Similarity=0.523 Sum_probs=9.2
Q ss_pred CCeEEEEecCCC
Q 029271 107 GIKIIIVGDGVE 118 (196)
Q Consensus 107 ~~~V~IavAG~s 118 (196)
+++++|-.||..
T Consensus 106 ~iD~lvnnAG~~ 117 (297)
T 1xhl_A 106 KIDILVNNAGAN 117 (297)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 568888888864
No 461
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=32.38 E-value=1.2e+02 Score=24.05 Aligned_cols=65 Identities=8% Similarity=-0.006 Sum_probs=38.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc------------------------CCchHHHHHHHHHhhC--
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH------------------------QNCKEALSYALSAKER-- 106 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH------------------------R~p~~~~~~~~~~e~~-- 106 (196)
.++++|+|+++.--+...+.+.|.+-|. ++.+.+-. ..++.+.+++++..++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4688888887444556677777777774 33333210 1233444455544333
Q ss_pred CCeEEEEecCCCC
Q 029271 107 GIKIIIVGDGVEA 119 (196)
Q Consensus 107 ~~~V~IavAG~sa 119 (196)
+++++|-.||...
T Consensus 87 ~iD~lv~~Ag~~~ 99 (265)
T 1qsg_A 87 KFDGFVHSIGFAP 99 (265)
T ss_dssp SEEEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 4689999998653
No 462
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=32.20 E-value=1.2e+02 Score=26.52 Aligned_cols=57 Identities=18% Similarity=0.104 Sum_probs=38.8
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEe
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 114 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~Iav 114 (196)
.|.|+..+..-...+.++...|.+-|+.+++- |+.-..+.+-++.+...|+..+|.+
T Consensus 368 ~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 424 (464)
T 4g84_A 368 QVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 424 (464)
T ss_dssp CEEEECSSSSCHHHHHHHHHHHHHTTCCEECC----SCSSCCHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 57777777778888999999999999987762 3322334444456666778644443
No 463
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=32.06 E-value=79 Score=26.30 Aligned_cols=60 Identities=15% Similarity=0.172 Sum_probs=32.6
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCC----eEEEEEcccC--------CchHHHHHHHHHhhC-CCeEEEEe
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVP----YEIKILPPHQ--------NCKEALSYALSAKER-GIKIIIVG 114 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~----~ev~V~SaHR--------~p~~~~~~~~~~e~~-~~~V~Iav 114 (196)
|.++-+.| .+.+...++.+.+.+.|++ .|+.+.|.+. .++.+.++++...+. +..|++=+
T Consensus 95 p~~~~i~g--~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~ 167 (314)
T 2e6f_A 95 PLFLSISG--LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM 167 (314)
T ss_dssp CEEEEECC--SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred cEEEEeCC--CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 44444544 4566666666666666655 5666655442 455555555554432 34455443
No 464
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=31.94 E-value=15 Score=30.38 Aligned_cols=29 Identities=24% Similarity=0.138 Sum_probs=19.1
Q ss_pred CeEEEEecCCCCchhHhhhhccCCcEEEecCCC
Q 029271 108 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 140 (196)
Q Consensus 108 ~~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~~ 140 (196)
++++|+.-.+-.|| |+....|+|++--.+
T Consensus 262 a~l~I~~Dsg~~Hl----Aaa~g~P~v~lfg~t 290 (348)
T 1psw_A 262 CKAIVTNDSGLMHV----AAALNRPLVALYGPS 290 (348)
T ss_dssp SSEEEEESSHHHHH----HHHTTCCEEEEESSS
T ss_pred CCEEEecCCHHHHH----HHHcCCCEEEEECCC
Confidence 57777765555555 555788999875443
No 465
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=31.86 E-value=1.8e+02 Score=23.02 Aligned_cols=26 Identities=15% Similarity=0.139 Sum_probs=15.1
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
+++++|+|+++- +...+.+.|-+-|.
T Consensus 26 ~k~vlVTGas~g--IG~~la~~l~~~G~ 51 (267)
T 4iiu_A 26 SRSVLVTGASKG--IGRAIARQLAADGF 51 (267)
T ss_dssp CCEEEETTTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 466777776654 34455555555554
No 466
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=31.81 E-value=40 Score=24.62 Aligned_cols=39 Identities=13% Similarity=0.011 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEcc-cCCchHHHHHHH
Q 029271 63 LDLPVMNDAARTLSDFGVPYEIKILPP-HQNCKEALSYAL 101 (196)
Q Consensus 63 SD~~~~~~~~~~l~~~gi~~ev~V~Sa-HR~p~~~~~~~~ 101 (196)
+.=+.|+++.+.|++.|++|+++=..- .-+.+++.++++
T Consensus 8 ~~C~~c~ka~~~L~~~gi~~~~~di~~~~~~~~el~~~l~ 47 (120)
T 3l78_A 8 PSCTSCRKARAWLNRHDVVFQEHNIMTSPLSRDELLKILS 47 (120)
T ss_dssp SSCHHHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHcCCCeEEEecccCCCcHHHHHHHHh
Confidence 446799999999999999998654433 334455555554
No 467
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=31.80 E-value=1.4e+02 Score=23.38 Aligned_cols=25 Identities=12% Similarity=0.236 Sum_probs=13.0
Q ss_pred chHHHHHHHHHhh----CCCe--EEEEecCC
Q 029271 93 CKEALSYALSAKE----RGIK--IIIVGDGV 117 (196)
Q Consensus 93 p~~~~~~~~~~e~----~~~~--V~IavAG~ 117 (196)
++.+.+++++..+ ..++ ++|-.||.
T Consensus 72 ~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 72 EAGVQRLLSAVRELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHHHHHHHHHHHHSCCCTTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHhccccccCCccEEEECCcc
Confidence 3444555554433 1345 77777765
No 468
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=31.77 E-value=1.6e+02 Score=22.77 Aligned_cols=26 Identities=8% Similarity=0.264 Sum_probs=13.8
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
++.+.+++++..+. +++++|-.||..
T Consensus 66 ~~~~~~~~~~~~~~~g~id~li~~Ag~~ 93 (276)
T 1wma_A 66 LQSIRALRDFLRKEYGGLDVLVNNAGIA 93 (276)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCccc
Confidence 34444444443322 467777777754
No 469
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=31.74 E-value=2.2e+02 Score=23.89 Aligned_cols=63 Identities=6% Similarity=0.016 Sum_probs=40.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEccc-CCchHHHHHHHHHhhCCCeEEEEecC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-QNCKEALSYALSAKERGIKIIIVGDG 116 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaH-R~p~~~~~~~~~~e~~~~~V~IavAG 116 (196)
.+|+||.-+.--...++...+.+++.|+....+. ... ........++++....+.+|||....
T Consensus 131 ~~vaii~d~~~g~~~~~~~~~~~~~~g~~v~~~~-~~~~~~~~d~~~~l~~ik~~~~~vii~~~~ 194 (389)
T 3o21_A 131 EKFVYLYDTERGFSVLQAIMEAAVQNNWQVTARS-VGNIKDVQEFRRIIEEMDRRQEKRYLIDCE 194 (389)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHHTTCEEEEEE-CTTCCCTHHHHHHHHHHHTTTCCEEEEESC
T ss_pred CEEEEEEcCcHHHHHHHHHHHHhhcCCCeEEEEE-ecCCCCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 4899998332224567788888889998654432 121 12335677778887777887776543
No 470
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=31.70 E-value=77 Score=24.53 Aligned_cols=75 Identities=12% Similarity=0.095 Sum_probs=42.7
Q ss_pred CCeEEEEEcCCC-------CHHHHHHHHHHHHHhCCCeE-EEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCc---
Q 029271 52 APIVGIIMESDL-------DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH--- 120 (196)
Q Consensus 52 ~~~V~IimGS~S-------D~~~~~~~~~~l~~~gi~~e-v~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~--- 120 (196)
.++|+||+=|+. |. ...-+...|+++|+... ..+. . -. +.+.+-++++-+++++++|+-.|.+.+
T Consensus 7 ~~rv~ii~tGdEl~~G~i~Ds-n~~~l~~~l~~~G~~v~~~~iv-~-Dd-~~i~~al~~a~~~~~DlVittGG~s~g~~D 82 (164)
T 3pzy_A 7 TRSARVIIASTRASSGEYEDR-CGPIITEWLAQQGFSSAQPEVV-A-DG-SPVGEALRKAIDDDVDVILTSGGTGIAPTD 82 (164)
T ss_dssp CCEEEEEEECHHHHC----CC-HHHHHHHHHHHTTCEECCCEEE-C-SS-HHHHHHHHHHHHTTCSEEEEESCCSSSTTC
T ss_pred CCEEEEEEECCCCCCCceeeH-HHHHHHHHHHHCCCEEEEEEEe-C-CH-HHHHHHHHHHHhCCCCEEEECCCCCCCCCc
Confidence 468999875532 21 12356678889998532 2232 1 12 444444444433468999998877653
Q ss_pred -hhHhhhhccC
Q 029271 121 -LSGVAAANSQ 130 (196)
Q Consensus 121 -L~gvvA~~t~ 130 (196)
.+-+++....
T Consensus 83 ~t~eal~~~~~ 93 (164)
T 3pzy_A 83 STPDQTVAVVD 93 (164)
T ss_dssp CHHHHHHTTCS
T ss_pred cHHHHHHHHhc
Confidence 4555554433
No 471
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=31.51 E-value=1.8e+02 Score=24.15 Aligned_cols=26 Identities=12% Similarity=0.028 Sum_probs=18.2
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
+++++|+|+++ -+...+++.|.+-|.
T Consensus 9 gk~~lVTGas~--GIG~~~a~~La~~Ga 34 (319)
T 1gz6_A 9 GRVVLVTGAGG--GLGRAYALAFAERGA 34 (319)
T ss_dssp TCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 56888888776 456667777776674
No 472
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=31.50 E-value=1.4e+02 Score=23.54 Aligned_cols=61 Identities=16% Similarity=0.210 Sum_probs=37.7
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCc------------------------hHHHHHHHHHhh--
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC------------------------KEALSYALSAKE-- 105 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p------------------------~~~~~~~~~~e~-- 105 (196)
..++++|+|+++ -+...+.+.|.+-|. ++.+. .|.+ +.+.+++++..+
T Consensus 11 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 84 (263)
T 3ak4_A 11 SGRKAIVTGGSK--GIGAAIARALDKAGA--TVAIA--DLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDAL 84 (263)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence 357889999887 456677777777775 33332 2333 334444443332
Q ss_pred CCCeEEEEecCCC
Q 029271 106 RGIKIIIVGDGVE 118 (196)
Q Consensus 106 ~~~~V~IavAG~s 118 (196)
.+++++|-.||..
T Consensus 85 g~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 85 GGFDLLCANAGVS 97 (263)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 2579999999964
No 473
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=31.22 E-value=85 Score=24.81 Aligned_cols=115 Identities=12% Similarity=-0.010 Sum_probs=73.3
Q ss_pred CeEEEEEcCCCCH---HHHHHHHHHHHHhCCCe----EEEEEcccCCchHHHHHHHHHhhCCCeEEEEec----CCCCch
Q 029271 53 PIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAHL 121 (196)
Q Consensus 53 ~~V~IimGS~SD~---~~~~~~~~~l~~~gi~~----ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavA----G~sa~L 121 (196)
.+++|+.+.-.+. .-.+.+.+.|++.|+.. .++|-++.-.|-...++++ +..++.+||.. |..-|-
T Consensus 11 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG~VIrG~T~Hf 87 (158)
T 1di0_A 11 FKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLAR---TGRYAAIVGAAFVIDGGIYDH 87 (158)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEEECCCCSSBCC
T ss_pred CEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEeeccccCCCcHH
Confidence 3899999999888 77788999999999863 3578888777766655543 35578777754 555443
Q ss_pred hHhh----------hhccCCcEEEecCCCCC-CChhh---hhhhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 029271 122 SGVA----------AANSQILVIRVPLLSED-WSEDD---VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 181 (196)
Q Consensus 122 ~gvv----------A~~t~~PVIgvP~~~~~-~~G~D---LlS~lqmPsGvpvatV~I~~~~nAA~~AaqILa~ 181 (196)
=-|. +=.|..||+..=..... -...| +... -..+.+..||..|.+++.+
T Consensus 88 d~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~eqA~er~~~~~~-----------~~~nKG~eaA~aal~m~~l 150 (158)
T 1di0_A 88 DFVATAVINGMMQVQLETEVPVLSVVLTPHHFHESKEHHDFFHA-----------HFKVKGVEAAHAALQIVSE 150 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECBSSCCCSHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhhhhcc-----------hhcchHHHHHHHHHHHHHH
Confidence 2221 22477888876322211 11222 1111 0126788899999988764
No 474
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=31.20 E-value=1.5e+02 Score=23.88 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=25.4
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHH
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 98 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~ 98 (196)
..++++|+|+++ -+...+.+.|.+-|. ++.+. -|.++.+.+
T Consensus 28 ~~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~~--~r~~~~~~~ 68 (276)
T 2b4q_A 28 AGRIALVTGGSR--GIGQMIAQGLLEAGA--RVFIC--ARDAEACAD 68 (276)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--CSCHHHHHH
T ss_pred CCCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHH
Confidence 357888999877 556677777777774 33333 355444433
No 475
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=31.17 E-value=77 Score=23.79 Aligned_cols=31 Identities=19% Similarity=0.211 Sum_probs=23.7
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKI 86 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V 86 (196)
.|.|.+. +.=+.|+++...|+++|++|+..=
T Consensus 50 ~Vvvf~~--~~Cp~C~~~k~~L~~~~i~~~~vd 80 (146)
T 2ht9_A 50 CVVIFSK--TSCSYCTMAKKLFHDMNVNYKVVE 80 (146)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHHTCCCEEEE
T ss_pred CEEEEEC--CCChhHHHHHHHHHHcCCCeEEEE
Confidence 4666543 444999999999999999987543
No 476
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.14 E-value=1.8e+02 Score=24.43 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=20.5
Q ss_pred hhCCCeEEEEecCCCCchhHhhhhccCCcEEE
Q 029271 104 KERGIKIIIVGDGVEAHLSGVAAANSQILVIR 135 (196)
Q Consensus 104 e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIg 135 (196)
.+...+++|+..|..+..+.+.|-....|++-
T Consensus 89 ~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 89 RQLRPVCVLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp HHHCCSEEEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred HhcCCCEEEEcCCcchHHHHHHHHHcCCCEEE
Confidence 34456888887776554444445567888874
No 477
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=31.12 E-value=1.7e+02 Score=23.05 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=14.5
Q ss_pred hHHHHHHHHHhh--CCCeEEEEecCCC
Q 029271 94 KEALSYALSAKE--RGIKIIIVGDGVE 118 (196)
Q Consensus 94 ~~~~~~~~~~e~--~~~~V~IavAG~s 118 (196)
+.+.+++++..+ .+++++|-.||..
T Consensus 68 ~~v~~~~~~~~~~~g~iD~lv~~Ag~~ 94 (260)
T 1x1t_A 68 EAVRGLVDNAVRQMGRIDILVNNAGIQ 94 (260)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 344444443322 2578999988864
No 478
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=31.11 E-value=93 Score=25.73 Aligned_cols=66 Identities=12% Similarity=0.031 Sum_probs=47.5
Q ss_pred HHHHHHhCCCeEEEEEcccCCc-hHHHHHHHHHhhCCCeEEEEecCCCCchhHhhhhccCCcEEEecCCC
Q 029271 72 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 140 (196)
Q Consensus 72 ~~~l~~~gi~~ev~V~SaHR~p-~~~~~~~~~~e~~~~~V~IavAG~sa~L~gvvA~~t~~PVIgvP~~~ 140 (196)
...++.+|+.|-+=..|.+|.. .++.+.++.+.+.|.++++++--. .-+..+ .+ ....||++=+..
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~-~e~~~~-~~-~~~~iIayep~w 144 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDP-RTSLAA-AA-LGPHAVAVEPPE 144 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSH-HHHHHH-HH-TCCSEEEECCGG
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHH-hc-CCCCEEEEcChh
Confidence 5678999999999999998876 578888888889999999988543 222222 12 233599986653
No 479
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=31.08 E-value=1.7e+02 Score=23.62 Aligned_cols=55 Identities=15% Similarity=0.125 Sum_probs=33.2
Q ss_pred CCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEecCCCCch-----hHh---hhhccCCcEEEecCC
Q 029271 79 GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL-----SGV---AAANSQILVIRVPLL 139 (196)
Q Consensus 79 gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~IavAG~sa~L-----~gv---vA~~t~~PVIgvP~~ 139 (196)
|++++..+.. ..| ...+++.++ +++.+|.++-+-+.+ +++ +.-+++.||+-||..
T Consensus 245 ~~~~~~~~~~--g~~--~~~I~~~a~--~adliV~G~~~~~~~~~~l~Gsv~~~vl~~~~~pVlvv~~~ 307 (309)
T 3cis_A 245 NVAITRVVVR--DQP--ARQLVQRSE--EAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 307 (309)
T ss_dssp TSCEEEEEES--SCH--HHHHHHHHT--TCSEEEEESSCSSCCTTCSSCHHHHHHHHHCSSCEEEECC-
T ss_pred CCcEEEEEEc--CCH--HHHHHHhhC--CCCEEEECCCCCCCccccccCcHHHHHHhcCCCCEEEeCCC
Confidence 7888877663 222 334555444 687777766544443 333 345688999999863
No 480
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=30.91 E-value=1.5e+02 Score=23.96 Aligned_cols=26 Identities=12% Similarity=-0.003 Sum_probs=17.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++- +...+++.|.+-|.
T Consensus 9 ~k~vlVTGas~G--IG~aia~~l~~~G~ 34 (285)
T 3sc4_A 9 GKTMFISGGSRG--IGLAIAKRVAADGA 34 (285)
T ss_dssp TCEEEEESCSSH--HHHHHHHHHHTTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 568888888764 45566666666665
No 481
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=30.84 E-value=1.9e+02 Score=23.09 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=17.7
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+++.|.+-|.
T Consensus 23 ~k~~lVTGas~--gIG~aia~~L~~~G~ 48 (288)
T 2x9g_A 23 APAAVVTGAAK--RIGRAIAVKLHQTGY 48 (288)
T ss_dssp CCEEEETTCSS--HHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 46888888876 455666666666664
No 482
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=30.56 E-value=2e+02 Score=22.82 Aligned_cols=27 Identities=26% Similarity=0.450 Sum_probs=17.0
Q ss_pred CchHHHHHHHHHhhC--CCeEEEEecCCC
Q 029271 92 NCKEALSYALSAKER--GIKIIIVGDGVE 118 (196)
Q Consensus 92 ~p~~~~~~~~~~e~~--~~~V~IavAG~s 118 (196)
.++.+.+++++..++ +++++|-.||..
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 110 (281)
T 3s55_A 82 DRAALESFVAEAEDTLGGIDIAITNAGIS 110 (281)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 344555555555432 578999888864
No 483
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=30.43 E-value=1.7e+02 Score=24.15 Aligned_cols=50 Identities=20% Similarity=0.312 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHH-HhCCCeEEEEEcccCCchHHHHHHHHHhhCC-CeEEEEe
Q 029271 64 DLPVMNDAARTLS-DFGVPYEIKILPPHQNCKEALSYALSAKERG-IKIIIVG 114 (196)
Q Consensus 64 D~~~~~~~~~~l~-~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~-~~V~Iav 114 (196)
|.+...++.+.++ ..++|.-+++.. .-+.+++.++++.+++.| ++.|++.
T Consensus 144 ~~~~~~~ii~~vr~~~~~Pv~vK~~~-~~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAYGLPFGVKMPP-YFDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp SHHHHHHHHHHHHHHHCSCEEEEECC-CCCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECC-CCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 5555666655554 458998888764 346778888899999989 8866653
No 484
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=30.38 E-value=2.1e+02 Score=22.85 Aligned_cols=61 Identities=10% Similarity=0.141 Sum_probs=37.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCch-----------------------HHHHHHHHHhh--C
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCK-----------------------EALSYALSAKE--R 106 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~-----------------------~~~~~~~~~e~--~ 106 (196)
..++++|+|+++ .+...+.+.|.+-|. ++.+. .|.++ .+.+++++..+ .
T Consensus 8 ~~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (270)
T 1yde_A 8 AGKVVVVTGGGR--GIGAGIVRAFVNSGA--RVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFG 81 (270)
T ss_dssp TTCEEEEETCSS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357889999887 456677777777774 33333 34433 33344443322 2
Q ss_pred CCeEEEEecCCC
Q 029271 107 GIKIIIVGDGVE 118 (196)
Q Consensus 107 ~~~V~IavAG~s 118 (196)
+++++|-.||..
T Consensus 82 ~iD~lv~nAg~~ 93 (270)
T 1yde_A 82 RLDCVVNNAGHH 93 (270)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 578999999864
No 485
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=30.22 E-value=1.2e+02 Score=24.64 Aligned_cols=61 Identities=18% Similarity=0.248 Sum_probs=36.0
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEcccCCc------------------------hHHHHHHHHHhh--
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC------------------------KEALSYALSAKE-- 105 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~SaHR~p------------------------~~~~~~~~~~e~-- 105 (196)
.+++++|+|+.+-+ ...+++.|.+-|. ++-+. .|.+ +.+.+++++..+
T Consensus 28 ~gk~vlVTGas~gI--G~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (277)
T 3gvc_A 28 AGKVAIVTGAGAGI--GLAVARRLADEGC--HVLCA--DIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF 101 (277)
T ss_dssp TTCEEEETTTTSTH--HHHHHHHHHHTTC--EEEEE--ESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHH--HHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence 45789999988865 4556666666665 22222 2333 334444444332
Q ss_pred CCCeEEEEecCCC
Q 029271 106 RGIKIIIVGDGVE 118 (196)
Q Consensus 106 ~~~~V~IavAG~s 118 (196)
.+++++|-.||..
T Consensus 102 g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 102 GGVDKLVANAGVV 114 (277)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 2568999888864
No 486
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=30.18 E-value=2e+02 Score=22.51 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=16.4
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|.+-|.
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (249)
T 2ew8_A 7 DKLAVITGGAN--GIGRAIAERFAVEGA 32 (249)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 46777777776 345556666665564
No 487
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=30.16 E-value=2e+02 Score=24.46 Aligned_cols=41 Identities=17% Similarity=0.357 Sum_probs=30.7
Q ss_pred HhCCCeEEEEEccc-----CCchHHHHHHHHHhhCCCeEEEEecCC
Q 029271 77 DFGVPYEIKILPPH-----QNCKEALSYALSAKERGIKIIIVGDGV 117 (196)
Q Consensus 77 ~~gi~~ev~V~SaH-----R~p~~~~~~~~~~e~~~~~V~IavAG~ 117 (196)
..+++.-+|+..-. -++++..++++.+++.|++.|-...|.
T Consensus 207 ~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~ 252 (338)
T 1z41_A 207 VWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGA 252 (338)
T ss_dssp HCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 34788888887632 356788899999999999877766654
No 488
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=30.04 E-value=1.9e+02 Score=22.22 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=14.9
Q ss_pred chHHHHHHHHHhhC--CCeEEEEecCC
Q 029271 93 CKEALSYALSAKER--GIKIIIVGDGV 117 (196)
Q Consensus 93 p~~~~~~~~~~e~~--~~~V~IavAG~ 117 (196)
++.+.+++++..++ +++++|-.||.
T Consensus 69 ~~~~~~~~~~~~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 69 SEACQQLVDEFVAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 34444555444322 57888888885
No 489
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.84 E-value=1.5e+02 Score=23.46 Aligned_cols=26 Identities=23% Similarity=0.142 Sum_probs=16.5
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ .+...+.+.|.+-|.
T Consensus 6 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 31 (278)
T 1spx_A 6 EKVAIITGSSN--GIGRATAVLFAREGA 31 (278)
T ss_dssp TCEEEETTTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 46777777766 455566666666564
No 490
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=29.82 E-value=2e+02 Score=23.43 Aligned_cols=83 Identities=22% Similarity=0.286 Sum_probs=53.7
Q ss_pred eEEEEE---cCCCCH---HHHHHHHHHHHHh-----CCCeEEEEEcccCCchHHHHHHHHHhh-CCCeEEEEecCCCCch
Q 029271 54 IVGIIM---ESDLDL---PVMNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHL 121 (196)
Q Consensus 54 ~V~Iim---GS~SD~---~~~~~~~~~l~~~-----gi~~ev~V~SaHR~p~~~~~~~~~~e~-~~~~V~IavAG~sa~L 121 (196)
+|+++. |..+++ +..+-+...++++ |.++++.+.--.-.|+...+.++++-. +++..||...+.+..+
T Consensus 6 ~IG~~~p~sg~~a~~~g~~~~~g~~~A~~~~~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~~~ 85 (375)
T 3i09_A 6 KIGFITDMSGLYADIDGQGGLEAIKMAVADFGGKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATAL 85 (375)
T ss_dssp EEEEEECSSSTTTTTSHHHHHHHHHHHHHHHTSEETTEEEEEEEEECTTCHHHHHHHHHHHHHHSCEEEEEECSCHHHHH
T ss_pred EEEEEeCCCcccccccCHHHHHHHHHHHHHhCCCCCCeEEEEEEecCCCCHHHHHHHHHHHHhhCCCEEEECCCCcHHHH
Confidence 677775 455554 3444555566665 445888888888889998888888765 7777777654443333
Q ss_pred hHh-hhhccCCcEEEe
Q 029271 122 SGV-AAANSQILVIRV 136 (196)
Q Consensus 122 ~gv-vA~~t~~PVIgv 136 (196)
+-. ++.....|+|..
T Consensus 86 a~~~~~~~~~ip~i~~ 101 (375)
T 3i09_A 86 SMNQVAAEKKKVYINI 101 (375)
T ss_dssp HHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHcCceEEEe
Confidence 221 223467899975
No 491
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=29.78 E-value=85 Score=21.53 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=22.8
Q ss_pred eEEEEEcCCCCHHHHHHHHHHHHHhCCCeEE
Q 029271 54 IVGIIMESDLDLPVMNDAARTLSDFGVPYEI 84 (196)
Q Consensus 54 ~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev 84 (196)
+.+|+. ++.|-...+++...|++.||||..
T Consensus 29 klViiA-~D~~~~~~~~i~~lc~~~~Ip~~~ 58 (82)
T 3v7e_A 29 KEVVVA-KDADPILTSSVVSLAEDQGISVSM 58 (82)
T ss_dssp EEEEEE-TTSCHHHHHHHHHHHHHHTCCEEE
T ss_pred eEEEEe-CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 455554 445558999999999999999754
No 492
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=29.76 E-value=69 Score=27.75 Aligned_cols=54 Identities=11% Similarity=0.085 Sum_probs=43.9
Q ss_pred CeEEEEEcCCCC-HHHHHHHHHHHHHhCCCeEEEEEcccCCchHHHHHHHHHhhC
Q 029271 53 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 106 (196)
Q Consensus 53 ~~V~IimGS~SD-~~~~~~~~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~ 106 (196)
.+++|+.|...+ .-+.+--.+.|+++|+.++..-....-+.+++++.++++.++
T Consensus 35 ~LavilvG~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~D 89 (288)
T 1b0a_A 35 GLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNAD 89 (288)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEECCEEECTTCCHHHHHHHHHHHHTC
T ss_pred eEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 367777776654 456667788899999999999998888999999999998765
No 493
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=29.64 E-value=1.4e+02 Score=24.76 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHH-HhCCCeEEEEEcccCCchHHHHHHHHHhhCCCeEEEEe
Q 029271 64 DLPVMNDAARTLS-DFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 114 (196)
Q Consensus 64 D~~~~~~~~~~l~-~~gi~~ev~V~SaHR~p~~~~~~~~~~e~~~~~V~Iav 114 (196)
|.+...++.+.++ ..++|.-+++. ..-+.+++.++++.+++.|++.|++.
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~-~~~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLP-PYFDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEEC-CCCSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEC-CCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 6666666666665 35889888876 43467788888999999899876664
No 494
>1pn9_A GST class-delta, glutathione S-transferase 1-6; protein inhibitor complex; HET: GTX; 2.00A {Anopheles gambiae} SCOP: a.45.1.1 c.47.1.5
Probab=29.54 E-value=75 Score=23.98 Aligned_cols=25 Identities=16% Similarity=0.157 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccc
Q 029271 66 PVMNDAARTLSDFGVPYEIKILPPH 90 (196)
Q Consensus 66 ~~~~~~~~~l~~~gi~~ev~V~SaH 90 (196)
+.++++.-.|++.|++|+.......
T Consensus 10 p~~~~v~~~L~~~gi~~e~~~v~~~ 34 (209)
T 1pn9_A 10 APCRAVQMTAAAVGVELNLKLTDLM 34 (209)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCGG
T ss_pred ccHHHHHHHHHHcCCCcEEEEeccc
Confidence 7889999999999999998776543
No 495
>4glt_A Glutathione S-transferase-like protein; structural genomics, function initiative, EFI; HET: GSH; 2.20A {Methylobacillus flagellatus}
Probab=29.53 E-value=25 Score=27.41 Aligned_cols=29 Identities=3% Similarity=0.015 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcccCCch
Q 029271 66 PVMNDAARTLSDFGVPYEIKILPPHQNCK 94 (196)
Q Consensus 66 ~~~~~~~~~l~~~gi~~ev~V~SaHR~p~ 94 (196)
|.+++++-+|++.||+||.........++
T Consensus 32 P~~~rVr~~L~e~gi~~e~~~v~~~~~~~ 60 (225)
T 4glt_A 32 PYARKVRVVAAEKRIDVDMVLVVLADPEC 60 (225)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTCSSS
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCCCCH
Confidence 89999999999999999987776544443
No 496
>1k0m_A CLIC1, NCC27, chloride intracellular channel protein 1; glutathione-S-tranferase superfamily, chloride ION channel, metal transport; 1.40A {Homo sapiens} SCOP: a.45.1.1 c.47.1.5 PDB: 1k0n_A* 1k0o_A 1rk4_A 3uvh_A 3o3t_A 3p90_A 3qr6_A 3p8w_A 3tgz_A 3ma4_A 3swl_A
Probab=29.49 E-value=1.2e+02 Score=23.80 Aligned_cols=26 Identities=15% Similarity=0.200 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc
Q 029271 64 DLPVMNDAARTLSDFGVPYEIKILPP 89 (196)
Q Consensus 64 D~~~~~~~~~~l~~~gi~~ev~V~Sa 89 (196)
--|.++++.-.|++.|++|+......
T Consensus 23 ~sp~~~rv~~~L~~~gi~ye~~~v~~ 48 (241)
T 1k0m_A 23 NCPFSQRLFMVLWLKGVTFNVTTVDT 48 (241)
T ss_dssp SCHHHHHHHHHHHHHTCCCEEEEECT
T ss_pred CCHHHHHHHHHHHHcCCccEEEEcCC
Confidence 34899999999999999999877664
No 497
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=29.48 E-value=2.1e+02 Score=22.50 Aligned_cols=26 Identities=12% Similarity=0.078 Sum_probs=16.0
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++ -+...+.+.|.+-|.
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (260)
T 2z1n_A 7 GKLAVVTAGSS--GLGFASALELARNGA 32 (260)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCC
Confidence 46777777776 345556666655553
No 498
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=29.40 E-value=2e+02 Score=22.24 Aligned_cols=26 Identities=15% Similarity=0.225 Sum_probs=15.1
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.++++|+|+++- +...+.+.|-+-|.
T Consensus 7 ~k~vlITGas~g--IG~~~a~~l~~~G~ 32 (255)
T 3icc_A 7 GKVALVTGASRG--IGRAIAKRLANDGA 32 (255)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 456677776653 44555555555553
No 499
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=29.34 E-value=61 Score=26.31 Aligned_cols=78 Identities=12% Similarity=0.111 Sum_probs=52.3
Q ss_pred CeEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEEc---ccCCchHHHHHHHHH-hhCCCeEEEEecCC-CCchhHhhhh
Q 029271 53 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSA-KERGIKIIIVGDGV-EAHLSGVAAA 127 (196)
Q Consensus 53 ~~V~IimGS~SD~~~~~~~~~~l~~~gi~~ev~V~S---aHR~p~~~~~~~~~~-e~~~~~V~IavAG~-sa~L~gvvA~ 127 (196)
..+++++|+. ++++.+.+-.+|..--+.+.. .|..++...+.+.++ ++.+.++|++.+-. ..-|++.+|+
T Consensus 38 ~v~av~~G~~-----~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa 112 (217)
T 3ih5_A 38 QLEAVVAGTG-----LKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSS 112 (217)
T ss_dssp CEEEEEEESC-----CTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHH
T ss_pred eEEEEEECCC-----HHHHHHHHHhcCCCEEEEecCcccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHH
Confidence 4688889974 344555566789986667765 366777766665554 34456777766533 3568899999
Q ss_pred ccCCcEEE
Q 029271 128 NSQILVIR 135 (196)
Q Consensus 128 ~t~~PVIg 135 (196)
....|.+.
T Consensus 113 ~L~~~~~s 120 (217)
T 3ih5_A 113 ALTSGLTA 120 (217)
T ss_dssp HTTCCCBC
T ss_pred HhCCCccc
Confidence 88887653
No 500
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=29.11 E-value=2.2e+02 Score=22.81 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=18.8
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Q 029271 52 APIVGIIMESDLDLPVMNDAARTLSDFGV 80 (196)
Q Consensus 52 ~~~V~IimGS~SD~~~~~~~~~~l~~~gi 80 (196)
.+++++|+|+.+ .+...+++.|.+-|.
T Consensus 30 ~gk~~lVTGas~--GIG~aia~~la~~G~ 56 (273)
T 3uf0_A 30 AGRTAVVTGAGS--GIGRAIAHGYARAGA 56 (273)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 357888888877 455666667766665
Done!