BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029273
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O22941|PXM16_ARATH Zinc-metallopeptidase, peroxisomal OS=Arabidopsis thaliana GN=PXM16
PE=2 SV=1
Length = 970
Score = 297 bits (761), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 137/191 (71%), Positives = 161/191 (84%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
VAGL YG++ +++GFE+T++GYNHKLRILLET+ KIA F+VKPDRF+VIKE VTKEY N
Sbjct: 573 VAGLYYGVSLSDNGFELTLLGYNHKLRILLETVVGKIANFEVKPDRFAVIKETVTKEYQN 632
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
KF QP+ AMYYCSLILQDQTWPW EEL+VL HLEAED+AKFVPM+LSRTF+ECYIAGN
Sbjct: 633 YKFRQPYHQAMYYCSLILQDQTWPWTEELDVLSHLEAEDVAKFVPMLLSRTFIECYIAGN 692
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDEN 183
+E+NEA S++++IEDV F PIC+PLFPSQHLTNRVVKL +G Y Y G NPSDEN
Sbjct: 693 VENNEAESMVKHIEDVLFNDPKPICRPLFPSQHLTNRVVKLGEGMKYFYHQDGSNPSDEN 752
Query: 184 SCLVHYIQVQE 194
S LVHYIQV
Sbjct: 753 SALVHYIQVHR 763
>sp|Q24K02|IDE_BOVIN Insulin-degrading enzyme OS=Bos taurus GN=IDE PE=2 SV=1
Length = 1019
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
+AGL Y + +T G ++V GYN K ILL+ I +K+A F++ RF +IKE + +N
Sbjct: 613 LAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNN 672
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ QP Q AMYY L++ + W E E L + L F+P +LSR +E + GN
Sbjct: 673 FRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN 732
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQ 175
I A I+Q +ED + ++ +PL PSQ + R V+L +VY +
Sbjct: 733 ITKQAALGIMQMVEDTLIEHAH--TKPLLPSQLVRYREVQLPDRGWFVYQQR 782
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme OS=Homo sapiens GN=IDE PE=1 SV=4
Length = 1019
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
+AGL Y + +T G ++V GYN K ILL+ I +K+A F++ RF +IKE + +N
Sbjct: 613 LAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNN 672
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ QP Q AMYY L++ + W E E L + L F+P +LSR +E + GN
Sbjct: 673 FRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN 732
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQ 175
I A I+Q +ED + ++ +PL PSQ + R V+L +VY +
Sbjct: 733 ITKQAALGIMQMVEDTLIEHAH--TKPLLPSQLVRYREVQLPDRGWFVYQQR 782
>sp|P35559|IDE_RAT Insulin-degrading enzyme OS=Rattus norvegicus GN=Ide PE=1 SV=1
Length = 1019
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
+AGL Y + +T G ++V GYN K ILL+ I +K+A F++ RF +IKE + +N
Sbjct: 613 LAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKITEKMATFEIDKKRFEIIKEAYMRSLNN 672
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ QP Q AMYY L++ + W E E L + L F+P +LSR +E + GN
Sbjct: 673 FRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN 732
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQ 175
I A ++Q +ED + ++ +PL PSQ + R V+L +VY +
Sbjct: 733 ITKQAALGVMQMVEDTLIEHAH--TKPLLPSQLVRYREVQLPDRGWFVYQRR 782
>sp|Q9JHR7|IDE_MOUSE Insulin-degrading enzyme OS=Mus musculus GN=Ide PE=1 SV=1
Length = 1019
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
+AGL Y + +T G ++V YN K ILL+ I +K+A F++ RF +IKE + +N
Sbjct: 613 LAGLSYDLQNTIYGMYLSVKRYNDKQPILLKKITEKMATFEIDKKRFEIIKEAYMRSLNN 672
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ QP Q AMYY L++ + W E E L + L F+P +LSR +E + GN
Sbjct: 673 FRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGN 732
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQ 175
I A ++Q +ED + ++ +PL PSQ + R V+L +VY +
Sbjct: 733 ITKQAALGVMQMVEDTLIEHAH--TKPLLPSQLVRYREVQLPDRGWFVYQQR 782
>sp|O14077|MU138_SCHPO Putative zinc protease mug138 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mug138 PE=1 SV=1
Length = 969
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 99/192 (51%), Gaps = 6/192 (3%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
+AGL + ++ + G + + G+ KL +LLE + + KV P RF ++K + +E +
Sbjct: 575 LAGLSFSLSPSTRGIILCISGFTDKLHVLLEKVVAMMRDLKVHPQRFEILKNRLEQELKD 634
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
L+ + + + + + + +W E E + ++ D++ F+ +L + FLE + GN
Sbjct: 635 YDALEAYHRSNHVLTWLSEPHSWSNAELREAIKDVQVGDMSDFISDLLKQNFLESLVHGN 694
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDEN 183
+A ++I+ + + +P +P+F SQ R + + +G NY+Y N ++N
Sbjct: 695 YTEEDAKNLIESAQKLI----DP--KPVFASQLSRKRAIIVPEGGNYIYKTVVPNKEEKN 748
Query: 184 SCLVHYIQVQEF 195
S +++ +Q+ +
Sbjct: 749 SAIMYNLQISQL 760
>sp|P22817|IDE_DROME Insulin-degrading enzyme OS=Drosophila melanogaster GN=Ide PE=1
SV=4
Length = 990
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
+A L + G + T+ G++ K +LLE + + F + RF ++KE + N
Sbjct: 586 LASLKLSVMGKSCGIDFTIRGFSDKQVVLLEKLLDHLFDFSIDEKRFDILKEEYVRSLKN 645
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
K QP+Q ++YY +L+L + W ME L+ + + + + F R EC+I GN
Sbjct: 646 FKAEQPYQHSIYYLALLLTENAWANMELLDAMELVTYDRVLNFAKEFFQRLHTECFIFGN 705
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDEN 183
+ +A I + + + +N P+ Q L R KL G +Y++ + N ++
Sbjct: 706 VTKQQATDIAGRV-NTRLEATNASKLPILARQMLKKREYKLLAGDSYLFEKE--NEFHKS 762
Query: 184 SCLVHYIQ 191
SC Y+Q
Sbjct: 763 SCAQLYLQ 770
>sp|Q06010|STE23_YEAST A-factor-processing enzyme OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STE23 PE=1 SV=2
Length = 1027
Score = 84.0 bits (206), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 5/189 (2%)
Query: 5 AGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNN 64
A L N T G +T G+N KL ILL Q + F+ K DRF ++K+ + N
Sbjct: 624 ADLRISFNKTNQGLAITASGFNEKLIILLTRFLQGVNSFEPKKDRFEILKDKTIRHLKNL 683
Query: 65 KFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNI 124
+ P+ Y + I+ +++W E+L+V L E L F+P + + E I GNI
Sbjct: 684 LYEVPYSQMSNYYNAIINERSWSTAEKLQVFEKLTFEQLINFIPTIYEGVYFETLIHGNI 743
Query: 125 ESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDENS 184
+ EA + I+ + N I + L R L KGK + Y + + NS
Sbjct: 744 KHEEALEVDSLIKSLI---PNNIHNLQVSNNRL--RSYLLPKGKTFRYETALKDSQNVNS 798
Query: 185 CLVHYIQVQ 193
C+ H Q+
Sbjct: 799 CIQHVTQLD 807
>sp|O43847|NRDC_HUMAN Nardilysin OS=Homo sapiens GN=NRD1 PE=1 SV=2
Length = 1150
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
VA L+Y + E G + V G+NHKL +L + I +A+F P F++I E + K Y
Sbjct: 744 VAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLAEFNSTPAVFTMITEQLKKTYF- 802
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVL-PHLEAEDLAKFVPMMLSRTFLECYIAG 122
N ++P LA LIL+ W +++ + L L E L FV S+ F+E + G
Sbjct: 803 NILIKPETLAKDVRLLILEYARWSMIDKYQALMDGLSLESLLSFVKEFKSQLFVEGLVQG 862
Query: 123 NIESNEAGSIIQYIEDVF-FKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSD 181
N+ S E+ ++Y+ D FK PL + +VV+L G +++ + LN D
Sbjct: 863 NVTSTESMDFLKYVVDKLNFK-------PLEQEMPVQFQVVELPSG-HHLCKVKALNKGD 914
Query: 182 ENSCLVHYIQ 191
NS + Y Q
Sbjct: 915 ANSEVTVYYQ 924
>sp|Q5R4H6|NRDC_PONAB Nardilysin OS=Pongo abelii GN=NRD1 PE=2 SV=1
Length = 1152
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
VA L+Y + E G + V G+NHKL +L + I +A+F P F++I E + K Y
Sbjct: 746 VAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIVDYLAEFNSTPAVFTMITEQLKKTYF- 804
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVL-PHLEAEDLAKFVPMMLSRTFLECYIAG 122
N ++P LA LIL+ W +++ + L L E L FV S+ F+E + G
Sbjct: 805 NILIKPETLAKDVRLLILEYARWSMIDKYQALMDGLSLESLLSFVKEFKSQLFVEGLVQG 864
Query: 123 NIESNEAGSIIQYIEDVF-FKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSD 181
N+ S E+ ++Y+ D FK PL + +VV+L G +++ + LN D
Sbjct: 865 NVTSTESMDFLKYVVDKLNFK-------PLEQEMPVQFQVVELPSG-HHLCKVKALNKGD 916
Query: 182 ENSCLVHYIQ 191
NS + Y Q
Sbjct: 917 ANSEVTVYYQ 926
>sp|Q10040|YQA4_CAEEL Putative zinc protease C28F5.4 OS=Caenorhabditis elegans GN=C28F5.4
PE=3 SV=2
Length = 856
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 1/169 (0%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
+AGL+ + SG ++ V GY+ K + + + ++A F+V F + E + + N
Sbjct: 510 LAGLECQFESSSSGVQIRVFGYDEKQSLFAKHLVNRMANFQVNRLCFDISFESLKRTLTN 569
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ F QP L+ ++ L++ D W + L V + ED+ F ML +E ++ GN
Sbjct: 570 HAFSQPHDLSAHFIDLLVVDNIWSKEQLLAVCDSVTLEDVHGFAIKMLQAFHMELFVHGN 629
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVY 172
+ + + + D+ K P +PL +H +R ++L G +VY
Sbjct: 630 STEKDTLQLSKELSDI-LKSVAPNSRPLKRDEHNPHRELQLINGHEHVY 677
>sp|P47245|NRDC_RAT Nardilysin OS=Rattus norvegicus GN=Nrd1 PE=2 SV=1
Length = 1161
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 9/189 (4%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
VA L+Y + E G + V G+NHKL +L + I + +F P F++I E + K Y
Sbjct: 756 VAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLTEFSSTPAVFTMITEQLKKTYF- 814
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVL-PHLEAEDLAKFVPMMLSRTFLECYIAG 122
N ++P LA LIL+ W +++ L L E L FV S+ F+E + G
Sbjct: 815 NILIKPETLAKDVRLLILEYSRWSMIDKYRALMDGLSLESLLNFVKDFKSQLFVEGLVQG 874
Query: 123 NIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDE 182
N+ S E+ ++Y+ D N + PL + +VV+L G +++ + LN D
Sbjct: 875 NVTSTESMDFLRYVVDKL----NFV--PLEREMPVQFQVVELPSG-HHLCKVRALNKGDA 927
Query: 183 NSCLVHYIQ 191
NS + Y Q
Sbjct: 928 NSEVTVYYQ 936
>sp|Q8BHG1|NRDC_MOUSE Nardilysin OS=Mus musculus GN=Nrd1 PE=1 SV=1
Length = 1161
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
VA L+Y + E G + V G+NHKL +L + I + +F P F++I E + K Y
Sbjct: 756 VAQLEYKLVAGEHGLIIRVKGFNHKLPLLFQLIIDYLTEFSSTPAVFTMITEQLKKTYF- 814
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVL-PHLEAEDLAKFVPMMLSRTFLECYIAG 122
N ++P LA LIL+ W +++ + L L + L FV S+ F+E + G
Sbjct: 815 NILIKPETLAKDVRLLILEYSRWSMIDKYQALMDGLSLDSLLNFVKDFKSQLFVEGLVQG 874
Query: 123 NIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSDE 182
N+ S E+ ++Y+ D PL + +VV+L G +++ + LN D
Sbjct: 875 NVTSTESMDFLKYVVDKL------NFAPLEREMPVQFQVVELPSG-HHLCKVRALNKGDA 927
Query: 183 NSCLVHYIQ 191
NS + Y Q
Sbjct: 928 NSEVTVYYQ 936
>sp|Q8CI75|DI3L2_MOUSE DIS3-like exonuclease 2 OS=Mus musculus GN=Dis3l2 PE=1 SV=1
Length = 870
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 48 DRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQ 84
D++S+ + KE N + +P Q+A+Y+CS +LQDQ
Sbjct: 649 DKYSLAR----KEVLTNMYSRPMQMALYFCSGMLQDQ 681
>sp|Q54JQ2|IDE_DICDI Insulin-degrading enzyme homolog OS=Dictyostelium discoideum
GN=DDB_G0287851 PE=3 SV=1
Length = 962
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Query: 19 EVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCS 78
E+ +N + L +F + + +F IKE V K + ++ +L P+Q++M + S
Sbjct: 587 ELQCYCFNDIIFTALGKVFDFLMNLDLNDMQFKRIKEKVAKRFLSSHYLSPYQISMRHLS 646
Query: 79 LILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSIIQYIED 138
L + +++ E L + + + + S + GN +A + + +
Sbjct: 647 LHNFNCNSMLLDKQEYLKKVTKSEFLNYFKSLFSYINFSAMVVGNASIEDACAFGEKLNS 706
Query: 139 VFFKGSNPIC 148
F N C
Sbjct: 707 --FSNRNSAC 714
>sp|Q8ZMB5|PTRA_SALTY Protease 3 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=ptrA PE=3 SV=1
Length = 962
Score = 32.7 bits (73), Expect = 1.7, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
V G+ + N +G VT GY +L L + + + ++ + K T+ +
Sbjct: 589 VGGISFSTN-ANNGLMVTANGYTQRLPQLFLALLEGYFSYDATEEQLAQAKSWYTQMMDS 647
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ + ++ A+ +I Q + E +LP + +++ + + + E + GN
Sbjct: 648 AEKGKAYEQAIMPVQMISQVPYFSRDERRALLPSITLKEVMAYRNALKTGARPEFLVIGN 707
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQG 176
+ +A S+ Q ++ + C+ N+ V +EK ++ ++ G
Sbjct: 708 MSEAQATSLAQDVQKQLAANGSAWCR---------NKDVVVEKKQSVIFEKAG 751
>sp|Q8Z418|PTRA_SALTI Protease 3 OS=Salmonella typhi GN=ptrA PE=3 SV=1
Length = 962
Score = 32.7 bits (73), Expect = 1.8, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
V G+ + N +G VT GY +L L + + + ++ + K T+ +
Sbjct: 589 VGGISFSTN-ANNGLMVTANGYTQRLPQLFLALLEGYFSYDATEEQLAQAKSWYTQMMDS 647
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ + ++ A+ +I Q + E +LP + +++ + + + E + GN
Sbjct: 648 AEKGKAYEQAIMPVQMISQVPYFSRDERRALLPSITLKEVMAYRNALKTGARPEFLVIGN 707
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQG 176
+ +A S+ Q ++ + C+ N+ V +EK ++ ++ G
Sbjct: 708 MSEAQATSLAQDVQKQLAANGSAWCR---------NKDVVVEKKQSVIFEKAG 751
>sp|B6QD96|AMP2B_PENMQ Methionine aminopeptidase 2 homolog PMAA_077770 OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=PMAA_077770 PE=3 SV=1
Length = 463
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 13/81 (16%)
Query: 122 GNIESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSD 181
G I ++EA S + +V + + + + + P Q LT V +E G + +QGL P D
Sbjct: 136 GTITNDEALSDYRKAAEVHRQVRHWVHETVHPGQSLTELAVGIEDGVRALLGHQGLEPGD 195
Query: 182 E-------------NSCLVHY 189
N+C HY
Sbjct: 196 SLKGGMGFPTGLALNNCAAHY 216
>sp|Q832R5|Y2153_ENTFA Putative ABC transporter ATP-binding protein EF_2153
OS=Enterococcus faecalis (strain ATCC 700802 / V583)
GN=EF_2153 PE=3 SV=1
Length = 568
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 16 SGFEVTVVGYNHKL-RILLETIFQKIAQFKVKPDRFSVIK-------EMVTKEY--HNNK 65
+G ++T V + KL + ET+ K+ Q+ V+P S +K E V+ +Y H K
Sbjct: 257 AGIDLTQVSHLDKLAEVSGETVLPKMTQWSVQPSSVSAVKGAELLRLEQVSYQYDRHGEK 316
Query: 66 FLQPFQLAMYYCSLI 80
L F + +++ +I
Sbjct: 317 VLDDFSVTIHHGEMI 331
>sp|Q8CVS2|PTRA_ECOL6 Protease 3 OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=ptrA PE=3 SV=1
Length = 962
Score = 31.6 bits (70), Expect = 3.4, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 74/178 (41%), Gaps = 11/178 (6%)
Query: 4 VAGLDYGINHTESGFEVTVVGYNHKLRILLETIFQKIAQFKVKPDRFSVIKEMVTKEYHN 63
V G+ + N +G V GY +L L + + + + D+ K + +
Sbjct: 589 VGGISFSTN-ANNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDS 647
Query: 64 NKFLQPFQLAMYYCSLILQDQTWPWMEELEVLPHLEAEDLAKFVPMMLSRTFLECYIAGN 123
+ + F+ A+ ++ Q + E ++LP + +++ + + S E + GN
Sbjct: 648 AEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGN 707
Query: 124 IESNEAGSIIQYIEDVFFKGSNPICQPLFPSQHLTNRVVKLEKGKNYVYSNQGLNPSD 181
+ +A ++ ++++ + C+ N+ V ++K ++ ++ G N +D
Sbjct: 708 MTEAQATTLARHVQKQLGADGSEWCR---------NKDVVVDKKQSVIFEKAG-NSTD 755
>sp|P0C6X9|R1AB_CVMA5 Replicase polyprotein 1ab OS=Murine coronavirus (strain A59) GN=rep
PE=1 SV=1
Length = 7176
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 37 FQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLP 96
FQ++ + K D+F V+K + Y+ K + ++L C ++ + + + + E +P
Sbjct: 4510 FQRVDEDGNKLDKFFVVKRTNLEVYNKEK--ECYELTKE-CGVVAEHEFFTFDVEGSRVP 4566
Query: 97 HLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSI 132
H+ +DL+KF + L CY + + N+ ++
Sbjct: 4567 HIVRKDLSKFTMLDL------CYALRHFDRNDCSTL 4596
>sp|P0C6Y0|R1AB_CVMJH Replicase polyprotein 1ab OS=Murine coronavirus (strain JHM) GN=rep
PE=1 SV=1
Length = 7180
Score = 30.4 bits (67), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 37 FQKIAQFKVKPDRFSVIKEMVTKEYHNNKFLQPFQLAMYYCSLILQDQTWPWMEELEVLP 96
FQ++ + K D+F V+K + Y+ K + ++L C ++ + + + + E +P
Sbjct: 4516 FQRVDEEGNKLDKFFVVKRTNLEVYNKEK--ECYELTKD-CGVVAEHEFFTFDVEGSRVP 4572
Query: 97 HLEAEDLAKFVPMMLSRTFLECYIAGNIESNEAGSI 132
H+ +DL+KF + L CY + + N+ ++
Sbjct: 4573 HIVRKDLSKFTMLDL------CYALRHFDRNDCSTL 4602
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,077,650
Number of Sequences: 539616
Number of extensions: 2896321
Number of successful extensions: 6315
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6290
Number of HSP's gapped (non-prelim): 26
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)