Query 029277
Match_columns 196
No_of_seqs 187 out of 1744
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 16:49:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i7u_A AP4A hydrolase; nudix p 99.9 3.2E-26 1.1E-30 170.2 16.5 126 39-180 4-131 (134)
2 3u53_A BIS(5'-nucleosyl)-tetra 99.9 3.1E-24 1.1E-28 162.4 16.3 137 41-181 5-145 (155)
3 1ktg_A Diadenosine tetraphosph 99.9 1.5E-22 5.1E-27 149.4 18.6 130 38-179 2-136 (138)
4 2pbt_A AP4A hydrolase; nudix p 99.9 7.2E-23 2.5E-27 150.2 16.4 126 39-180 4-131 (134)
5 3son_A Hypothetical nudix hydr 99.9 2E-22 6.7E-27 151.0 17.0 134 40-183 6-146 (149)
6 1vcd_A NDX1; nudix protein, di 99.9 2.6E-22 9E-27 145.9 16.1 122 40-178 3-124 (126)
7 3gg6_A Nudix motif 18, nucleos 99.9 4.1E-22 1.4E-26 150.4 12.8 133 34-184 15-153 (156)
8 3i9x_A MUTT/nudix family prote 99.9 2.2E-22 7.5E-27 156.9 11.3 138 37-184 25-178 (187)
9 3fcm_A Hydrolase, nudix family 99.9 1.1E-21 3.6E-26 154.3 15.2 137 37-184 43-190 (197)
10 2b0v_A Nudix hydrolase; struct 99.9 2.7E-21 9.2E-26 145.0 16.3 121 38-172 7-134 (153)
11 3grn_A MUTT related protein; s 99.9 4.6E-21 1.6E-25 144.3 16.6 126 37-178 6-137 (153)
12 4dyw_A MUTT/nudix family prote 99.9 1.4E-21 4.7E-26 148.2 13.6 123 37-174 27-153 (157)
13 3q1p_A Phosphohydrolase (MUTT/ 99.9 5.7E-22 1.9E-26 157.1 11.8 134 37-185 66-202 (205)
14 2yyh_A MUTT domain, 8-OXO-DGTP 99.9 3.3E-21 1.1E-25 142.7 14.1 126 37-176 7-136 (139)
15 2azw_A MUTT/nudix family prote 99.9 6.5E-21 2.2E-25 142.0 15.7 125 37-175 16-144 (148)
16 3fjy_A Probable MUTT1 protein; 99.9 1.8E-21 6.3E-26 166.5 14.2 143 40-183 4-180 (364)
17 2o1c_A DATP pyrophosphohydrola 99.9 4.6E-21 1.6E-25 142.8 14.4 127 39-178 9-149 (150)
18 3o8s_A Nudix hydrolase, ADP-ri 99.9 1.5E-21 5.1E-26 154.8 12.1 133 37-185 68-203 (206)
19 1sjy_A MUTT/nudix family prote 99.9 3.9E-21 1.3E-25 145.0 13.7 133 38-184 12-155 (159)
20 3f6a_A Hydrolase, nudix family 99.9 2.8E-21 9.7E-26 146.4 12.7 126 38-177 5-150 (159)
21 1k2e_A Nudix homolog; nudix/MU 99.9 1.3E-21 4.4E-26 148.1 10.4 122 40-182 2-140 (156)
22 3gz5_A MUTT/nudix family prote 99.9 2E-21 6.9E-26 157.7 12.2 135 37-181 20-159 (240)
23 3gwy_A Putative CTP pyrophosph 99.9 8.2E-21 2.8E-25 140.9 14.1 121 39-177 6-132 (140)
24 2fb1_A Conserved hypothetical 99.9 1.2E-21 4.2E-26 157.6 9.8 133 37-181 11-146 (226)
25 3exq_A Nudix family hydrolase; 99.9 2.6E-21 9E-26 147.2 10.8 126 37-176 8-136 (161)
26 1rya_A GDP-mannose mannosyl hy 99.9 1E-20 3.5E-25 142.8 13.9 125 37-174 16-152 (160)
27 3shd_A Phosphatase NUDJ; nudix 99.9 1.3E-20 4.4E-25 141.6 14.1 122 38-174 4-130 (153)
28 2fvv_A Diphosphoinositol polyp 99.9 4.5E-21 1.5E-25 150.9 11.9 118 33-165 33-154 (194)
29 3cng_A Nudix hydrolase; struct 99.8 1.8E-20 6.3E-25 146.4 14.8 130 37-185 38-171 (189)
30 3id9_A MUTT/nudix family prote 99.8 5.2E-21 1.8E-25 146.5 11.1 123 37-175 21-149 (171)
31 3q93_A 7,8-dihydro-8-oxoguanin 99.8 1.2E-20 4.1E-25 146.0 13.1 110 64-176 37-149 (176)
32 3fk9_A Mutator MUTT protein; s 99.8 9.8E-21 3.4E-25 148.0 12.2 112 64-177 16-130 (188)
33 3ees_A Probable pyrophosphohyd 99.8 3.2E-20 1.1E-24 138.8 14.3 111 64-179 34-148 (153)
34 2rrk_A ORF135, CTP pyrophospho 99.8 8.8E-20 3E-24 134.6 15.7 110 64-178 21-134 (140)
35 3h95_A Nucleoside diphosphate- 99.8 4.7E-20 1.6E-24 145.1 14.1 127 37-176 24-156 (199)
36 3hhj_A Mutator MUTT protein; n 99.8 3.7E-20 1.3E-24 140.0 12.8 111 64-178 42-157 (158)
37 3r03_A Nudix hydrolase; struct 99.8 3.5E-20 1.2E-24 137.5 12.1 125 39-179 8-137 (144)
38 3eds_A MUTT/nudix family prote 99.8 1.3E-20 4.4E-25 142.1 9.8 112 38-163 20-137 (153)
39 2fkb_A Putative nudix hydrolas 99.8 3.2E-19 1.1E-23 137.5 16.6 128 38-181 36-171 (180)
40 3oga_A Nucleoside triphosphata 99.8 1.2E-19 4.2E-24 138.1 13.8 109 64-174 40-162 (165)
41 2pqv_A MUTT/nudix family prote 99.8 4.2E-20 1.4E-24 139.0 10.4 113 37-165 17-133 (154)
42 2w4e_A MUTT/nudix family prote 99.8 2.7E-19 9.2E-24 133.8 14.0 112 39-165 5-121 (145)
43 2kdv_A RNA pyrophosphohydrolas 99.8 2.8E-19 9.4E-24 136.7 14.3 129 37-178 6-155 (164)
44 2b06_A MUTT/nudix family prote 99.8 2.6E-19 9E-24 134.6 13.3 127 37-176 6-134 (155)
45 2jvb_A Protein PSU1, mRNA-deca 99.8 9.9E-20 3.4E-24 135.6 10.1 110 41-165 6-118 (146)
46 1f3y_A Diadenosine 5',5'''-P1, 99.8 1.1E-19 3.6E-24 137.6 10.4 130 37-179 12-162 (165)
47 3f13_A Putative nudix hydrolas 99.8 2.1E-19 7E-24 137.7 11.7 107 64-181 28-134 (163)
48 1hzt_A Isopentenyl diphosphate 99.8 5.4E-19 1.9E-23 137.8 12.9 128 38-179 31-174 (190)
49 2qjo_A Bifunctional NMN adenyl 99.8 4E-19 1.4E-23 149.8 11.1 127 37-177 201-340 (341)
50 2fml_A MUTT/nudix family prote 99.8 4.5E-19 1.5E-23 146.4 11.1 137 37-181 37-200 (273)
51 1vk6_A NADH pyrophosphatase; 1 99.8 1.2E-18 4.1E-23 143.7 12.9 113 64-181 152-267 (269)
52 2yvp_A NDX2, MUTT/nudix family 99.8 6.3E-19 2.1E-23 136.4 10.4 115 37-166 39-159 (182)
53 2qjt_B Nicotinamide-nucleotide 99.8 1.7E-18 5.7E-23 146.8 13.1 129 37-178 206-348 (352)
54 1nqz_A COA pyrophosphatase (MU 99.8 9.9E-19 3.4E-23 136.6 10.0 114 37-163 32-153 (194)
55 1q27_A Putative nudix hydrolas 99.8 2E-18 6.7E-23 132.0 11.2 125 39-179 34-168 (171)
56 1mut_A MUTT, nucleoside tripho 99.8 1.3E-19 4.3E-24 131.8 4.1 106 64-174 17-126 (129)
57 3e57_A Uncharacterized protein 99.8 2.4E-18 8.1E-23 136.9 11.6 111 37-162 65-189 (211)
58 1v8y_A ADP-ribose pyrophosphat 99.8 3.9E-18 1.3E-22 130.6 11.6 113 38-167 33-150 (170)
59 3q91_A Uridine diphosphate glu 99.8 2E-18 6.7E-23 138.3 9.9 128 26-167 23-194 (218)
60 1x51_A A/G-specific adenine DN 99.8 1.2E-17 4E-22 125.9 13.6 125 38-176 18-148 (155)
61 1vhz_A ADP compounds hydrolase 99.8 6.6E-18 2.3E-22 133.1 12.4 101 64-167 61-166 (198)
62 1mk1_A ADPR pyrophosphatase; n 99.8 6.9E-18 2.3E-22 133.6 11.6 113 39-166 43-163 (207)
63 3o6z_A GDP-mannose pyrophospha 99.7 4E-18 1.4E-22 133.5 9.8 114 39-167 45-172 (191)
64 1q33_A Pyrophosphatase, ADP-ri 99.7 1.5E-17 5E-22 138.6 12.7 140 37-179 108-278 (292)
65 1g0s_A Hypothetical 23.7 kDa p 99.7 5.4E-18 1.8E-22 134.6 9.2 113 40-166 58-184 (209)
66 2dsc_A ADP-sugar pyrophosphata 99.7 3.7E-17 1.3E-21 129.9 11.5 113 40-163 62-185 (212)
67 2a6t_A SPAC19A8.12; alpha/beta 99.7 7.4E-18 2.5E-22 139.0 6.7 110 40-164 102-215 (271)
68 3fsp_A A/G-specific adenine gl 99.7 5.7E-16 1.9E-20 132.9 13.3 108 64-180 253-364 (369)
69 1u20_A U8 snoRNA-binding prote 99.7 1.4E-16 4.6E-21 126.8 8.5 117 37-161 31-165 (212)
70 2dho_A Isopentenyl-diphosphate 99.6 1.9E-14 6.6E-19 116.3 15.3 112 38-163 58-192 (235)
71 2pny_A Isopentenyl-diphosphate 99.6 1.8E-14 6E-19 117.3 14.0 113 38-164 69-204 (246)
72 3qsj_A Nudix hydrolase; struct 99.6 3.3E-14 1.1E-18 114.7 14.0 116 37-161 6-188 (232)
73 3rh7_A Hypothetical oxidoreduc 99.6 7.7E-15 2.6E-19 123.6 10.4 118 37-184 181-300 (321)
74 2xsq_A U8 snoRNA-decapping enz 99.5 1E-14 3.4E-19 116.6 6.3 93 64-159 66-171 (217)
75 3dup_A MUTT/nudix family prote 99.5 5.4E-13 1.8E-17 111.2 14.1 118 38-164 117-245 (300)
76 3kvh_A Protein syndesmos; NUDT 99.3 2.3E-12 7.8E-17 100.1 7.5 95 36-137 18-115 (214)
77 3bho_A Cleavage and polyadenyl 99.3 1.3E-11 4.6E-16 96.7 8.2 110 37-159 56-183 (208)
78 3b71_D T-cell surface glycopro 29.9 14 0.00049 18.4 0.4 6 191-196 16-21 (26)
79 1vig_A Vigilin; RNA-binding pr 20.6 52 0.0018 20.3 1.9 17 93-109 26-42 (71)
No 1
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.94 E-value=3.2e-26 Score=170.19 Aligned_cols=126 Identities=24% Similarity=0.292 Sum_probs=100.0
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEee
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK 118 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~ 118 (196)
+.+||+|+++++ +|||++++ .|.|.||||++|+|||+.+||+||++||||+.+..... ++.+.+.
T Consensus 4 ~~aag~vv~~~~-------------~vLL~~r~-~g~W~~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~~~~-l~~~~~~ 68 (134)
T 3i7u_A 4 EFSAGGVLFKDG-------------EVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDY-IGEIHYW 68 (134)
T ss_dssp EEEEEEEEEETT-------------EEEEEECT-TSCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEE
T ss_pred EEEEEEEEEECC-------------EEEEEEeC-CCcEECCeeEecCCCCHHHHHHHHHHHhcCceEEEeee-eeeeeEE
Confidence 468899998853 79999875 47899999999999999999999999999999988777 7765544
Q ss_pred eCCCC--ceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhc
Q 029277 119 SRAHN--TDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 180 (196)
Q Consensus 119 ~~~~~--~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 180 (196)
....+ ....+++|.+....... .+.+|+.+++|++++++.+++.++..++++.+++..+.+
T Consensus 69 ~~~~~~~~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~e~~~~l~~~~~r~il~~a~~l~~k 131 (134)
T 3i7u_A 69 YTLKGERIFKTVKYYLMKYKEGEP-RPSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEETTEEEEEEEEEEEEEEEEECC-CCCTTSSEEEEEEHHHHHHHBCSHHHHHHHHHHHHHHHH
T ss_pred ecCCCceEEEEEEEEEEEEcCCcC-cCChhheEEEEEEHHHHhhhcCChHHHHHHHHHHHHHHc
Confidence 33222 23345667776655433 355688999999999999999999999999988876654
No 2
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.92 E-value=3.1e-24 Score=162.43 Aligned_cols=137 Identities=26% Similarity=0.240 Sum_probs=100.7
Q ss_pred EEEEEEEEeeccCCcccccCCceEEEEEEEcCC-CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEee-
Q 029277 41 VVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK- 118 (196)
Q Consensus 41 ~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~-~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~- 118 (196)
++|+|+|+... ...++.++.++||++++++ +.|.||||++|+|||+.+||+||++||||+.+..... ++.+...
T Consensus 5 a~G~iifr~~~---~~~~~n~~~e~LL~~r~~~~~~W~lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~ 80 (155)
T 3u53_A 5 ACGLIIFRRCL---IPKVDNNAIEFLLLQASDGIHHWTPPKGHVEPGEDDLETALRETQEEAGIEAGQLTI-IEGFKREL 80 (155)
T ss_dssp EEEEEEEEECC---CSSSSSCSEEEEEEEESSSSCCEECSEEECCSSCCHHHHHHHHHHHHHCCCGGGEEE-EEEEEEEE
T ss_pred EeEEEEEcccc---ccceeCCCcEEEEEEecCCCCCEECCeeeccCCCCHHHHHHHHHHHHHCCcccccee-eeeEeeee
Confidence 78999998641 1112226789999998764 7899999999999999999999999999999876555 4433222
Q ss_pred -eCCCCceEEEEEEEEeecccc-ccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhcc
Q 029277 119 -SRAHNTDYQGYMFPLLVQDQL-AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 181 (196)
Q Consensus 119 -~~~~~~~~~~~~f~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 181 (196)
...........+|.+...... ...+++|+.+++|++++|+.+++.++.++.+|..+.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~ea~~~~~~~~~~~~L~~a~~~L~~~ 145 (155)
T 3u53_A 81 NYVARNKPKTVIYWLAEVKDYDVEIRLSHEHQAYRWLGLEEACQLAQFKEMKAALQEGHQFLCSI 145 (155)
T ss_dssp EEEETTEEEEEEEEEEEESCTTCCCCCCTTEEEEEEECHHHHHHHHCSHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcceeEEEEEEEEEeccCCccCCCcceeEEEEeEHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 122233344445555554432 233456789999999999999999999999999988888654
No 3
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.91 E-value=1.5e-22 Score=149.40 Aligned_cols=130 Identities=19% Similarity=0.195 Sum_probs=99.2
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC-CCEEecCcccCCCCCHHHHHHHHHHHhhceee---eec-ceee
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-KGMLFPKGGWEIDESIQEAALRETIEEAGVTG---IVE-CELL 112 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~-~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~---~~~-~~~l 112 (196)
.+.+|++++++.+ + ++.+|||++++.+ +.|.||||++++||++.+||+||++||||+.+ ... .. +
T Consensus 2 ~~~~~~~vi~~~~---~------~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~-~ 71 (138)
T 1ktg_A 2 VVKAAGLVIYRKL---A------GKIEFLLLQASYPPHHWTPPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDC-H 71 (138)
T ss_dssp CEEEEEEEEEEEE---T------TEEEEEEEEESSTTCCEESSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEE-E
T ss_pred ceEEEEEEEEEec---C------CCcEEEEEEccCCCCcEeCCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccc-c
Confidence 3568889999875 1 3468999998643 58999999999999999999999999999954 333 22 4
Q ss_pred eeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHh
Q 029277 113 GEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 179 (196)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 179 (196)
+.+.+... ......++|.+.........+..|+.+++|++++++.+++.++.++.+++.+.++++
T Consensus 72 ~~~~~~~~--~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 136 (138)
T 1ktg_A 72 ETLFYEAK--GKPKSVKYWLAKLNNPDDVQLSHEHQNWKWCELEDAIKIADYAEMGSLLRKFSAFLA 136 (138)
T ss_dssp EEEEEEET--TEEEEEEEEEEEECSCCCCCCCTTEEEEEEECHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEeC--CCceEEEEEEEEecCCcccCCCchhcEeEeccHHHHHHhhccchHHHHHHHHHHHhh
Confidence 44545443 334556677777665323334567899999999999999999999999998888764
No 4
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.90 E-value=7.2e-23 Score=150.20 Aligned_cols=126 Identities=24% Similarity=0.296 Sum_probs=99.4
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEee
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK 118 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~ 118 (196)
..+|++|+++.+ +|||+++.+ +.|.||||+++.||++.+||.||++||||+.+..... ++.+.+.
T Consensus 4 ~~~~~~vi~~~~-------------~vLl~~r~~-~~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~ 68 (134)
T 2pbt_A 4 EFSAGGVLFKDG-------------EVLLIKTPS-NVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDY-IGEIHYW 68 (134)
T ss_dssp EEEEEEEEEETT-------------EEEEEECTT-SCEECCEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEEEE
T ss_pred ceEEEEEEEECC-------------EEEEEEeCC-CcEECCccccCCCCCHHHHHHHHHHHHHCCccEEeee-eeEEEEE
Confidence 456778888732 799999877 8999999999999999999999999999999988776 7776554
Q ss_pred eCCCC--ceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhc
Q 029277 119 SRAHN--TDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 180 (196)
Q Consensus 119 ~~~~~--~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 180 (196)
....+ .....++|.+........ +.+|..+++|++++++.+++..+.++.+++.+++.+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~ 131 (134)
T 2pbt_A 69 YTLKGERIFKTVKYYLMKYKEGEPR-PSWEVKDAKFFPIKEAKKLLKYKGDKEIFEKALKLKEK 131 (134)
T ss_dssp EEETTEEEEEEEEEEEEEEEEECCC-CCTTSSEEEEEEHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred eeCCCcEEEEEEEEEEEEecCCCcC-CCcceeEEEEEcHHHHHhhhcchhHHHHHHHHHHHhhh
Confidence 44322 234556777766544333 23378999999999999999999999999998887754
No 5
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.90 E-value=2e-22 Score=151.04 Aligned_cols=134 Identities=22% Similarity=0.217 Sum_probs=100.4
Q ss_pred EEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee-eEEee
Q 029277 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG-EWNFK 118 (196)
Q Consensus 40 ~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~-~~~~~ 118 (196)
.+|+++++... + ++.+|||+++.+.|.|.||||++|+||++.+||+||++||||+.+......+. .+.+.
T Consensus 6 ~~v~vvi~~~~---~------~~~~vLl~~r~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~ 76 (149)
T 3son_A 6 FQVLVIPFIKT---E------ANYQFGVLHRTDADVWQFVAGGGEDEEAISETAKRESIEELNLDVDVKMYSLDSHASIP 76 (149)
T ss_dssp CEEEEEEEEEC---S------SSEEEEEEEESSSSCEECEEEECCTTCCHHHHHHHHHHHHHTCCSCCCEEEEEEEEEEE
T ss_pred eEEEEEEEEec---C------CCeEEEEEEEcCCCCEeCCccccCCCCCHHHHHHHHHHHHhCCCcccceEEEEeeeccc
Confidence 46777777654 2 45689999998889999999999999999999999999999999876422122 12211
Q ss_pred e---C-CCCceEEEEEEEEeecc--ccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhcccc
Q 029277 119 S---R-AHNTDYQGYMFPLLVQD--QLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQL 183 (196)
Q Consensus 119 ~---~-~~~~~~~~~~f~~~~~~--~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~ 183 (196)
. . ........++|.+.... .... ...|+.+++|++++++.+++..+..+.++..+.+++.....
T Consensus 77 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~ 146 (149)
T 3son_A 77 NFHFSFNKPYVVPEYCFAIDLTSCSYQVT-LSLEHSELRWVSYESAIQLLEWDSNKTALYELNERLKNNDM 146 (149)
T ss_dssp GGGTCSSSCSEEEEEEEEEECTTTGGGCC-CCTTEEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHTTCC
T ss_pred ceeeccCCceEeEEEEEEEEcCCCCCccc-CCCceeeEEEeCHHHHHHHhcCHHHHHHHHHHHHHHhhccc
Confidence 1 1 12234455678877763 2222 24678999999999999999999999999999998877644
No 6
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.90 E-value=2.6e-22 Score=145.86 Aligned_cols=122 Identities=27% Similarity=0.262 Sum_probs=96.4
Q ss_pred EEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeee
Q 029277 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKS 119 (196)
Q Consensus 40 ~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~ 119 (196)
.++++++++.+ ++|||+++.+ |.|.||||+++.||++.+||.||++||||+.+..... ++.+.+..
T Consensus 3 ~~~~~vi~~~~------------~~vLl~~r~~-g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~ 68 (126)
T 1vcd_A 3 LGAGGVVFNAK------------REVLLLRDRM-GFWVFPKGHPEPGESLEEAAVREVWEETGVRAEVLLP-LYPTRYVN 68 (126)
T ss_dssp EEEEEEEECTT------------SCEEEEECTT-SCEECCEECCCTTCCHHHHHHHHHHHHHCCEEEEEEE-EEEEEEEC
T ss_pred eEEEEEEEcCC------------CEEEEEEECC-CCccCCcCcCCCCCCHHHHHHHHHHHhhCcEeeeccE-EeEEEEec
Confidence 46778888753 2799999876 8899999999999999999999999999999988777 77776655
Q ss_pred CCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHH
Q 029277 120 RAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRL 178 (196)
Q Consensus 120 ~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 178 (196)
. ......++|.+...... ..++.|..+++|++++++.+++..+.++.+++.+.+++
T Consensus 69 ~--~~~~~~~~~~~~~~~~~-~~~~~e~~~~~w~~~~el~~~~~~~~~~~~l~~~~~~l 124 (126)
T 1vcd_A 69 P--KGVEREVHWFLMRGEGA-PRLEEGMTGAGWFSPEEARALLAFPEDLGLLEVALERL 124 (126)
T ss_dssp T--TSCEEEEEEEEEEEESC-CCCCTTCCEEEEECHHHHHHHBCSHHHHHHHHHHHHHS
T ss_pred C--CceEEEEEEEEEEcCCC-CCCCcceeeeEEcCHHHHHHhhcChhHHHHHHHHHHhc
Confidence 3 23344566666544332 33456778999999999999999999999998877654
No 7
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.88 E-value=4.1e-22 Score=150.36 Aligned_cols=133 Identities=19% Similarity=0.141 Sum_probs=101.6
Q ss_pred cCCCceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce
Q 029277 34 YQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE 110 (196)
Q Consensus 34 ~~~~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~---~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~ 110 (196)
+......++++++++.+ ++|||+++.+ .+.|.||||+++.||++.+||+||++||||+.+.....
T Consensus 15 ~~~~~~~~v~~~i~~~~------------~~vLl~~r~~~~~~~~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~ 82 (156)
T 3gg6_A 15 LRKNVCYVVLAVFLSEQ------------DEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETL 82 (156)
T ss_dssp CCTTCEEEEEEECBCTT------------SEEEEEECCCTTSTTCEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEE
T ss_pred cCCceEEEEEEEEEeCC------------CEEEEEEecCCCCCCEEECCeeeccCCCCHHHHHHHHHHHhhCceeEeeeE
Confidence 33345556667776642 3899999877 47899999999999999999999999999999988877
Q ss_pred eeeeEEeeeCCCCceEEEEEEEEeecccccc---CCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhccccC
Q 029277 111 LLGEWNFKSRAHNTDYQGYMFPLLVQDQLAE---WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQLH 184 (196)
Q Consensus 111 ~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~ 184 (196)
++.+.. ...+..++|.+........ .+++|..+++|++++++.+++..+.+++++..+...+....++
T Consensus 83 -~~~~~~-----~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~~~~~p 153 (156)
T 3gg6_A 83 -LSVEER-----GPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRAHDILHLVELAAQYRQQARHP 153 (156)
T ss_dssp -EEEEES-----STTEEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSCTHHHHHHHHHHHHHHHHHCC
T ss_pred -EEEEcC-----CCCEEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccchhHHHHHHHHHHHhhcCCCc
Confidence 666542 1223455676665433221 2346778999999999999999999999999888888776655
No 8
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.88 E-value=2.2e-22 Score=156.89 Aligned_cols=138 Identities=20% Similarity=0.144 Sum_probs=102.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCC----ceEEEEEEEc----------CCCCEEecCcccCCCCCHHHHHHHHHHHhhc
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEE----DLEVLVISSQ----------KGKGMLFPKGGWEIDESIQEAALRETIEEAG 102 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~----~~~vLLv~~~----------~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtG 102 (196)
..+++|+++++..+. + +++|||+++. ..|.|.||||++++||++.+||+||++||||
T Consensus 25 p~~~~v~~vv~~~~~---------~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs~~~aa~REl~EEtG 95 (187)
T 3i9x_A 25 PDGYTSDMILTTVKE---------LNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESAEQAAERELEEETS 95 (187)
T ss_dssp CSEEEEEEEEEEEEE---------ETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSCHHHHHHHHHHHHHC
T ss_pred cccceEEEEEEEEcC---------CCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCCHHHHHHHHHHHHHC
Confidence 444889999988751 3 4689999983 2478999999999999999999999999999
Q ss_pred eeeeecceeeeeEEeeeCCCCceEEEEEEEEeeccc--cccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhc
Q 029277 103 VTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQ--LAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 180 (196)
Q Consensus 103 l~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 180 (196)
+.+..... ++.+.+............+|.+..... ....+.+|..+++|++++++..+...+..+.+|..+++++++
T Consensus 96 l~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~l~~~~~~il~~a~~~l~~ 174 (187)
T 3i9x_A 96 LTDIPLIP-FGVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALELPLAFDHLDMLKKAFSAITE 174 (187)
T ss_dssp CCSCCCEE-EEEECCTTSSTTSSEEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTTSCBSTTHHHHHHHHHHHHHH
T ss_pred CCCcceEE-EEEEcCCccCCCCCEEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHcccCCCCccHHHHHHHHHHHHHh
Confidence 99888777 777654433333334444444443322 112234677899999999999876667889999999998877
Q ss_pred cccC
Q 029277 181 QQLH 184 (196)
Q Consensus 181 ~~~~ 184 (196)
....
T Consensus 175 ~~~~ 178 (187)
T 3i9x_A 175 EFLL 178 (187)
T ss_dssp HHHT
T ss_pred hhhc
Confidence 6543
No 9
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.88 E-value=1.1e-21 Score=154.31 Aligned_cols=137 Identities=13% Similarity=0.136 Sum_probs=93.8
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhcee-eeecceeeeeE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVT-GIVECELLGEW 115 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~-~~~~~~~l~~~ 115 (196)
.++.+|++++++.+ +.+|||++++..|.|.||||++|.|||+.+||+||++||||+. +.........+
T Consensus 43 ~~h~~~~~vv~~~~-----------~~~vLL~~r~~~g~w~lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~~~~~ 111 (197)
T 3fcm_A 43 IAHLTSSAFAVNKE-----------RNKFLMIHHNIYNSWAWTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDKAFAL 111 (197)
T ss_dssp SEEEEEEEEEECTT-----------SCEEEEEEETTTTEEECEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSSCSEE
T ss_pred CccEEEEEEEEECC-----------CCEEEEEEecCCCCEECCccccCCCCCHHHHHHHHHHHHHCCCcccccCCCceEE
Confidence 56778888888753 3489999998889999999999999999999999999999998 55422101122
Q ss_pred Eeee-CC----C----CceEEEEEEEEeeccccc-cCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhccccC
Q 029277 116 NFKS-RA----H----NTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQLH 184 (196)
Q Consensus 116 ~~~~-~~----~----~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~ 184 (196)
.+.. .. + ...+..+.|.+....... ..+.+|+.+++|++++++.+++..+.++.+++.+++++.++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l~~~~~~ 190 (197)
T 3fcm_A 112 DVLTVNGHIKRGKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSEPHMIPIYEKLINKLKTQSKE 190 (197)
T ss_dssp EEEEECCEEETTEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCCGGGHHHHHHHHHHHHC----
T ss_pred EEeeecCccccCcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCCHHHHHHHHHHHHHHHhcccc
Confidence 2111 11 0 111222455555443322 23346789999999999999999999999999999999876533
No 10
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.88 E-value=2.7e-21 Score=144.98 Aligned_cols=121 Identities=20% Similarity=0.250 Sum_probs=88.4
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCC---CEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeee
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGK---GMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~---~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~ 114 (196)
++.+|++|+.+. ++|||+++.+.+ .|.||||++++||++.+||+||++||||+.+..... ++.
T Consensus 7 ~~~~v~~ii~~~-------------~~vLl~~r~~~~~~~~w~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~ 72 (153)
T 2b0v_A 7 PNVTVAAVIEQD-------------DKYLLVEEIPRGTAIKLNQPAGHLEPGESIIQACSREVLEETGHSFLPEVL-TGI 72 (153)
T ss_dssp CEEEEEEECEET-------------TEEEEEEECSSSSCCEEECSEEECCTTSCHHHHHHHHHHHHHSEEEEEEEE-EEE
T ss_pred CCEEEEEEEeeC-------------CEEEEEEEcCCCCCCeEECCCcCcCCCCCHHHHHHHHHHHhhCcEeccceE-EEE
Confidence 456666666542 179999987644 799999999999999999999999999999988777 777
Q ss_pred EEeeeCCCCceEEEEEEEEeeccccc-cCCcCccceeEEEeHHHHHhh---ccchhHHHHHH
Q 029277 115 WNFKSRAHNTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWMSVAEARKV---CQHWWMKEALD 172 (196)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~---~~~~~~~~~l~ 172 (196)
+.+..+.....+..++|.+....... ...+.|..+++|++++++.++ ...+.++.++.
T Consensus 73 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~~~l~ 134 (153)
T 2b0v_A 73 YHWTCASNGTTYLRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAMHRTPLVMQCIE 134 (153)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHHTGGGBSSTHHHHHHH
T ss_pred EEEeCCCCCcEEEEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhhhhcccCcHHHHHHHH
Confidence 76666543344555667776554322 234567799999999999985 34444444443
No 11
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.87 E-value=4.6e-21 Score=144.27 Aligned_cols=126 Identities=18% Similarity=0.144 Sum_probs=97.4
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC-----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeeccee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECEL 111 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~-----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~ 111 (196)
.++.+|++++++.+ ++|||++|... |.|.||||+++.||++.+||+||++||||+.+.....
T Consensus 6 ~~~~~v~~vi~~~~------------~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~- 72 (153)
T 3grn_A 6 PYIISVYALIRNEK------------GEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDI- 72 (153)
T ss_dssp CEEEEEEEEEECTT------------CCEEEEEECTTCSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCSE-
T ss_pred ceEEEEEEEEEcCC------------CcEEEEEEcCCCCCCCCeEECceeecCCCCCHHHHHHhhhhhhhCcEeecceE-
Confidence 45778888888743 27999998764 7899999999999999999999999999999988877
Q ss_pred eeeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhc-cchhHHHHHHHHHHHH
Q 029277 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVC-QHWWMKEALDRLVMRL 178 (196)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~~~~~l 178 (196)
++.+.+..+ ......++|.+........ +..|..+++|++++++.++. ..+.++.+++.+.+..
T Consensus 73 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~l~~~~ 137 (153)
T 3grn_A 73 AGQVNFELT--EKKVIAIVFDGGYVVADVK-LSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDREN 137 (153)
T ss_dssp EEEEEEECS--SCEEEEEEEEEEECCCCCC-CCTTEEEEEEECHHHHTTCSSSCHHHHHHHHHHHHHH
T ss_pred EEEEEEecC--CceEEEEEEEEEecCCcEe-cCCCcceEEEEEHHHhhhcccchHHHHHHHHHHhccc
Confidence 777765544 2344556666665443322 34677899999999999998 7888888887766543
No 12
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.87 E-value=1.4e-21 Score=148.23 Aligned_cols=123 Identities=15% Similarity=0.148 Sum_probs=95.1
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~---~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
.++.+|++|+++.+ +|||+++.+ .+.|.||||+++.||++.+||+||++||||+.+..... ++
T Consensus 27 ~~~~~v~~vi~~~~-------------~vLL~~r~~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~ 92 (157)
T 4dyw_A 27 QPRVGCGAAIVRDG-------------RILLIKRKRAPEAGCWGLPGGKVDWLEPVERAVCREIEEELGIALERATL-LC 92 (157)
T ss_dssp CCEEEEEEEEEETT-------------EEEEEEECSSSSTTCEECCEEECCTTCCHHHHHHHHHHHHHSCEEESCEE-EE
T ss_pred CceeEEEEEEEECC-------------EEEEEEecCCCCCCEEECCcccCCCCCCHHHHHHHHHHHHHCcccccCcE-EE
Confidence 46788888888832 799999874 47899999999999999999999999999999988877 77
Q ss_pred eEEeeeCCCCceEEEEEEEEeecccccc-CCcCccceeEEEeHHHHHhhccchhHHHHHHHH
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAE-WPEKNVRSRKWMSVAEARKVCQHWWMKEALDRL 174 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 174 (196)
.+.+...........++|.+........ ...+|..+++|++++++.+. ..+..+.+|+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~-l~~~~~~~l~~l 153 (157)
T 4dyw_A 93 VVDHIDAANGEHWVAPVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQP-LTHATRIALEQV 153 (157)
T ss_dssp EEEEEETTTTEEEEEEEEEESEEESCCCCSCTTTEEEEEEEETTSCCSS-BCHHHHHHHHHH
T ss_pred EEEeeccCCCcEEEEEEEEEEEcCCCcccCCCCcEeEEEEECHHHcccc-cCHHHHHHHHHH
Confidence 7776665444555666777765443332 23357799999999999884 456667777654
No 13
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.87 E-value=5.7e-22 Score=157.10 Aligned_cols=134 Identities=10% Similarity=0.099 Sum_probs=104.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~ 116 (196)
.++.++++++++.+ +|||+++...|.|.||||++++||++.+||+||++||||+.+..... ++.+.
T Consensus 66 ~~~~~v~~vv~~~~-------------~vLLv~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~v~~~~~-l~~~~ 131 (205)
T 3q1p_A 66 TPKVDIRAVVFQNE-------------KLLFVKEKSDGKWALPGGWADVGYTPTEVAAKEVFEETGYEVDHFKL-LAIFD 131 (205)
T ss_dssp CCEEEEEEEEEETT-------------EEEEEEC---CCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEE
T ss_pred CCcceEEEEEEECC-------------EEEEEEEcCCCcEECCcCccCCCCCHHHHHHHHHHHHHCCccccceE-EEEEe
Confidence 56788888888632 79999988778999999999999999999999999999999988777 77665
Q ss_pred eeeC---CCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhccccCC
Q 029277 117 FKSR---AHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQLHG 185 (196)
Q Consensus 117 ~~~~---~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~~ 185 (196)
.... ....+...++|.+........ ++.|..+++|++++++.++...+..++.+..+++.+.+..+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~w~~~~el~~l~~~~~~~~~i~~~~~~~~~~~~~~ 202 (205)
T 3q1p_A 132 KEKHQPSPSATHVYKIFIGCEIIGGEKK-TSIETEEVEFFGENELPNLSIARNTEDQIKEMFAYMKDPQKEK 202 (205)
T ss_dssp HHHHSCCCCSSCEEEEEEEEEEEEECCC-CCTTSCCEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCTTSCC
T ss_pred ccccCCCCCCceEEEEEEEEEecCCccC-CCCcceEEEEEeHHHhhhcCCCccHHHHHHHHHHHHhCCCCCc
Confidence 4321 222344556677766543322 3467899999999999999988999999999999988877664
No 14
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.87 E-value=3.3e-21 Score=142.68 Aligned_cols=126 Identities=17% Similarity=0.128 Sum_probs=91.8
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceE--EEEEEEcCC-CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLE--VLVISSQKG-KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~--vLLv~~~~~-~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
.++.++++++++.+ .+++ +||+++.+. +.|.||||++++|||+.+||+||++||||+.+..... ++
T Consensus 7 ~p~~~v~~vi~~~~----------~~~~~~vLl~~r~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~ 75 (139)
T 2yyh_A 7 TPLLATDVIIRLWD----------GENFKGIVLIERKYPPVGLALPGGFVEVGERVEEAAAREMREETGLEVRLHKL-MG 75 (139)
T ss_dssp CCEEEEEEEEEEEE----------TTEEEEEEEEEECSSSCSEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE-EE
T ss_pred CCeEEEEEEEEEEc----------CCCcEEEEEEEecCCCCcEECccccCCCCCCHHHHHHHHHHHHHCCCcccceE-EE
Confidence 56788999999854 2336 999998764 5699999999999999999999999999999887776 66
Q ss_pred eEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHH-hhccchhHHHHHHHHHH
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEAR-KVCQHWWMKEALDRLVM 176 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~-~~~~~~~~~~~l~~~~~ 176 (196)
.+.+.......+...++|.+.... . ..+.+|..+++|++++++. ..+..+ .+.++..+++
T Consensus 76 ~~~~~~~~~~~~~~~~~f~~~~~~-~-~~~~~e~~~~~W~~~~el~~~~l~~~-~~~~l~~~l~ 136 (139)
T 2yyh_A 76 VYSDPERDPRAHVVSVVWIGDAQG-E-PKAGSDAKKVKVYRLEEIPLDKLVFD-HKKIILDFLK 136 (139)
T ss_dssp EECCTTSCTTSCEEEEEEEEEEES-C-CCCCTTEEEEEEECTTSCCGGGBCTT-HHHHHHHHHH
T ss_pred EECCCCcCCCceEEEEEEEEecCC-c-cCCCCCcceEEEEEHHHCCHhhcCCC-HHHHHHHHHh
Confidence 665433222335566677777632 2 2245677899999999998 333333 4556655543
No 15
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.87 E-value=6.5e-21 Score=141.97 Aligned_cols=125 Identities=22% Similarity=0.333 Sum_probs=92.6
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~ 116 (196)
..+..+++++++.+ +++|||+++. .|.|.||||+++.||++.+||+||++||||+.+..... ++.+.
T Consensus 16 ~~~~~~~~vi~~~~-----------~~~vLl~~r~-~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~~~ 82 (148)
T 2azw_A 16 QTRYAAYIIVSKPE-----------NNTMVLVQAP-NGAYFLPGGEIEGTETKEEAIHREVLEELGISVEIGCY-LGEAD 82 (148)
T ss_dssp EECCEEEEECEEGG-----------GTEEEEEECT-TSCEECSEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEE
T ss_pred eeeeEEEEEEECCC-----------CCeEEEEEcC-CCCEeCCCcccCCCCCHHHHHHHHHHHHhCCeeEeeeE-EEEEE
Confidence 34567778888752 2379999874 58999999999999999999999999999999988776 66553
Q ss_pred -eeeCCCC-c--eEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHH
Q 029277 117 -FKSRAHN-T--DYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLV 175 (196)
Q Consensus 117 -~~~~~~~-~--~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 175 (196)
+...... . ....++|.+....... .+.+|..+++|++++++.+++..+.++.++..++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 144 (148)
T 2azw_A 83 EYFYSNHRQTAYYNPGYFYVANTWRQLS-EPLERTNTLHWVAPEEAVRLLKRGSHRWAVEKWL 144 (148)
T ss_dssp EEEEETTTTEEEEEEEEEEEEEEEEECS-SCC-CCSEEEEECHHHHHHHBSCHHHHHHHHHHH
T ss_pred EEEcCCCCCcceEEEEEEEEEEcCcCCc-CCCCceeeEEEeeHHHHHhhhcchhHHHHHHHHH
Confidence 2222222 1 2345667666544322 2345678999999999999999999999888766
No 16
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.87 E-value=1.8e-21 Score=166.49 Aligned_cols=143 Identities=24% Similarity=0.263 Sum_probs=105.0
Q ss_pred EEEEEEEEEeeccC----C-------cccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeec
Q 029277 40 QVVGCIPYRYKCVK----Q-------SLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVE 108 (196)
Q Consensus 40 ~~vgaii~~~~~~~----~-------g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~ 108 (196)
.++|+|+|+..... + +.+++.++.+|||++++..+.|.||||++|+|||+.+||+||++||||+.+...
T Consensus 4 ~aag~i~~r~~~~~~i~~~~~i~~~~~~~i~~~~~~vLLv~r~~~g~W~lPgG~ve~gEs~~~AA~REl~EEtGl~~~~~ 83 (364)
T 3fjy_A 4 EAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWPKGKLEQNETHRHAAVREIGEETGSPVKLG 83 (364)
T ss_dssp CEEEEEEEEECTTSHHHHCGGGGGGSCHHHHHTTEEEEEEEETTTTEEECCEEECCTTCCHHHHHHHHHHHHHSCCEEEE
T ss_pred cccCcEEEEeeccccccCCccccccccccccCCceEEEEEEcCCCCCEECCcCCCCCCCCHHHHHHHHHHHHhCCeeeec
Confidence 57899999964110 0 011222567999999988789999999999999999999999999999999887
Q ss_pred ceeeeeEEeeeCCCC-----------ceEEEEEEEEeecccc----------c--cCCcCccceeEEEeHHHHHhhccch
Q 029277 109 CELLGEWNFKSRAHN-----------TDYQGYMFPLLVQDQL----------A--EWPEKNVRSRKWMSVAEARKVCQHW 165 (196)
Q Consensus 109 ~~~l~~~~~~~~~~~-----------~~~~~~~f~~~~~~~~----------~--~~~~~e~~~~~W~~~~el~~~~~~~ 165 (196)
.. ++.+.+.....+ .....++|.+...... + ....+|+.+++|++++++.+++.++
T Consensus 84 ~~-l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~~~ 162 (364)
T 3fjy_A 84 PY-LCEVEYPLSEEGKKTRHSHDCTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHS 162 (364)
T ss_dssp EE-EEEEC---------------------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCSCH
T ss_pred cc-cceEEEeccCCCcccccccccccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhcch
Confidence 77 776665544221 1345566766654432 1 1234678999999999999999999
Q ss_pred hHHHHHHHHHHHHhcccc
Q 029277 166 WMKEALDRLVMRLTSQQL 183 (196)
Q Consensus 166 ~~~~~l~~~~~~l~~~~~ 183 (196)
..+.++..+.++++.+..
T Consensus 163 ~~r~il~~~~~~l~~g~~ 180 (364)
T 3fjy_A 163 TDKDTLAVFVDRVQEGAA 180 (364)
T ss_dssp HHHHHHHHHHHHHHTTGG
T ss_pred hhHHHHHHHHHHhccCCC
Confidence 999999999999987764
No 17
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.86 E-value=4.6e-21 Score=142.78 Aligned_cols=127 Identities=18% Similarity=0.222 Sum_probs=93.0
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeec--ceeeeeE
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVE--CELLGEW 115 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~--~~~l~~~ 115 (196)
+.+|++++++.+ ++++||++++. .|.|.||||+++.||++.+||+||++||||+.+... .. ++..
T Consensus 9 ~~~v~~~i~~~~-----------~~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~-~~~~ 76 (150)
T 2o1c_A 9 PVSILVVIYAQD-----------TKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTL-IDCQ 76 (150)
T ss_dssp SEEEEEEEEETT-----------TCEEEEEECSSSTTCEESEEEECCTTCCHHHHHHHHHHHHHCCCHHHHTCCE-EEEE
T ss_pred ceEEEEEEEeCC-----------CCEEEEEEecCCCCceECCccccCCCCCHHHHHHHHHHHHhCCCccccceeE-Eeee
Confidence 357888888752 23899999876 588999999999999999999999999999998664 22 3322
Q ss_pred E---e--------eeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHH
Q 029277 116 N---F--------KSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRL 178 (196)
Q Consensus 116 ~---~--------~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 178 (196)
. | ..+........++|.+........ ...|..+++|++++++.++...+.++.+++.+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 149 (150)
T 2o1c_A 77 RTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQI-VFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINA 149 (150)
T ss_dssp EEEEEECCGGGGGGBCTTCCEEEEEEEEEEESSCCCC-CCSSSSCEEEEEHHHHHHHCSCHHHHHHHHHHTTC-
T ss_pred ceeeeeeecccccccCCCCcceEEEEEEEEcCCCCCc-ChhHhhccEeecHHHHHhhhcCHHHHHHHHHHHHhc
Confidence 1 1 011122345667787776543322 236789999999999999999898888888776543
No 18
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.86 E-value=1.5e-21 Score=154.77 Aligned_cols=133 Identities=11% Similarity=0.119 Sum_probs=104.6
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~ 116 (196)
.++..+++++++.+ +|||+++. .+.|.||||++++||++.+||+||++||||+.+..... ++.+.
T Consensus 68 ~~~~~v~~vv~~~~-------------~vLLvrr~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~ 132 (206)
T 3o8s_A 68 TPKLDTRAAIFQED-------------KILLVQEN-DGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRV-VAILD 132 (206)
T ss_dssp CCEEEEEEEEEETT-------------EEEEEECT-TSCEECSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEE-EEEEE
T ss_pred CCCccEEEEEEECC-------------EEEEEEec-CCeEECCeeccCCCCCHHHHHHHHHHHHHCCcceeeeE-EEEEe
Confidence 56778888888742 79999987 78999999999999999999999999999999988777 77765
Q ss_pred eeeCC---CCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhccccCC
Q 029277 117 FKSRA---HNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQLHG 185 (196)
Q Consensus 117 ~~~~~---~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~~~~ 185 (196)
+.... .......++|.+........ +..|..+++|++++++.++...+.+++.++.+++.+++..+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~E~~~~~w~~~~el~~l~~~~~~~~~l~~~~~~~~~~~~~~ 203 (206)
T 3o8s_A 133 KHKNNPAKSAHRVTKVFILCRLLGGEFQ-PNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSEHWET 203 (206)
T ss_dssp HHHHCC-----CEEEEEEEEEEEEECCC-CCSSCSEEEEECTTSCCCBCTTTCCHHHHHHHHHHHHCSSCCC
T ss_pred ccccCCCCCCceEEEEEEEEEecCCeec-CCCCceEEEEEeHHHhhhccCCCchHHHHHHHHHHHHCCCCCC
Confidence 32211 12234455666665543322 3467899999999999999988999999999999998887764
No 19
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.86 E-value=3.9e-21 Score=144.97 Aligned_cols=133 Identities=14% Similarity=0.066 Sum_probs=95.7
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-------CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE 110 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-------~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~ 110 (196)
.+.++++++++.+ +++||+++.+ .+.|.||||+++.||++.+||+||++||||+.+.....
T Consensus 12 ~~~~~~~vi~~~~------------~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~ 79 (159)
T 1sjy_A 12 ELRAAGVVLLNER------------GDILLVQEKGIPGHPEKAGLWHIPSGAVEDGENPQDAAVREACEETGLRVRPVKF 79 (159)
T ss_dssp CEEEEEEEEBCTT------------CCEEEEEESCC----CCCCCEECSEEECCTTSCHHHHHHHHHHHHHSCCEEEEEE
T ss_pred EEEeEEEEEEeCC------------CCEEEEEecccCcCCCCCCeEECCccccCCCCCHHHHHHHHHHHHHCccceeeEE
Confidence 4567777777642 2799999874 27899999999999999999999999999999988777
Q ss_pred eeeeEEeeeCCCCceEEEEEEEEeecccc-ccC-CcCccceeEEEeHHHHHhhccchhHHH--HHHHHHHHHhccccC
Q 029277 111 LLGEWNFKSRAHNTDYQGYMFPLLVQDQL-AEW-PEKNVRSRKWMSVAEARKVCQHWWMKE--ALDRLVMRLTSQQLH 184 (196)
Q Consensus 111 ~l~~~~~~~~~~~~~~~~~~f~~~~~~~~-~~~-~~~e~~~~~W~~~~el~~~~~~~~~~~--~l~~~~~~l~~~~~~ 184 (196)
++.+.+..+.. .....++|.+...... ... ..+|+.++.|++++++.+++....++. .+..+.+.+++++++
T Consensus 80 -l~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~p 155 (159)
T 1sjy_A 80 -LGAYLGRFPDG-VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAGQIRMYQTKLFYADALREKGFP 155 (159)
T ss_dssp -EEEEEEECTTS-CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTTCBSCTHHHHHHHHHHHHHTCC
T ss_pred -EEEEecccCCC-ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcccchhhhhHHHHHHHHhcCCCC
Confidence 77766554332 4556677877765443 332 456779999999999998876543321 222244555655554
No 20
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.86 E-value=2.8e-21 Score=146.43 Aligned_cols=126 Identities=18% Similarity=0.118 Sum_probs=90.8
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeE--
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW-- 115 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~-- 115 (196)
.+.+|++++++.+ +|||+++++.|.|.||||++++|||+.+||+||++||||+.+..... ++.+
T Consensus 5 ~~~~v~~vi~~~~-------------~vLL~~r~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~ 70 (159)
T 3f6a_A 5 RHFTVSVFIVCKD-------------KVLLHLHKKAKKMLPLGGHIEVNELPEEACIREAKEEAGLNVTLYNP-IDINLK 70 (159)
T ss_dssp SCEEEEEEEEETT-------------EEEEEECSSSCCEECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCC-CCHHHH
T ss_pred ceEEEEEEEEECC-------------EEEEEEcCCCCeEECCccCccCCCCHHHHHHHHHHHHhCCCceeccc-cccccc
Confidence 3567888888732 79999998889999999999999999999999999999999887666 4321
Q ss_pred ---------Eeee--------CCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhc-cchhHHHHHHHHHHH
Q 029277 116 ---------NFKS--------RAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVC-QHWWMKEALDRLVMR 177 (196)
Q Consensus 116 ---------~~~~--------~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-~~~~~~~~l~~~~~~ 177 (196)
.+.. ......+..++|.+...........+|..+++|++++++.++. .....+.+.+.+.+.
T Consensus 71 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~ 150 (159)
T 3f6a_A 71 KSCDLSGEKLLINPIHTILGDVSPNHSHIDFVYYATTTSFETSPEIGESKILKWYSKEDLKNAHNIQENILVMATEALDL 150 (159)
T ss_dssp HHHHHTTCEEECCCSEEEEECSSSSSCEEEEEEEEECSCSCCCCCTTSCCCEEEECSSSSTTCSSSCHHHHHHHHHHHHH
T ss_pred ccccccccccccCccccccccCCCCceEEEEEEEEEeCCCCcCCCCCcccceEEeeHHHHhhCcCCChhHHHHHHHHHHH
Confidence 0000 0012234556777776654444345678999999999999987 555555555554443
No 21
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.86 E-value=1.3e-21 Score=148.15 Aligned_cols=122 Identities=16% Similarity=0.127 Sum_probs=90.0
Q ss_pred EEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEE---
Q 029277 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN--- 116 (196)
Q Consensus 40 ~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~--- 116 (196)
.+|++++++.+ +|||+++++.|.|.||||++++|||+.+||+||++||||+.+..... ++.+.
T Consensus 2 ~~~~~vi~~~~-------------~vLL~~r~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~ 67 (156)
T 1k2e_A 2 IVTSGVLVENG-------------KVLLVKHKRLGVYIYPGGHVEHNETPIEAVKREFEEETGIVVEPIGF-TYGIIDEN 67 (156)
T ss_dssp EEEEEECEETT-------------EEEEEECTTTCSEECSEEECCTTCCHHHHHHHHHHHHHSEEEEECCC-CCCCBSSS
T ss_pred eEEEEEEEECC-------------EEEEEEEcCCCcEECCeeecCCCCCHHHHHHHHHHHHHCCcceeccc-eeeecccc
Confidence 46778887731 79999988778999999999999999999999999999999887654 32111
Q ss_pred -------------e-eeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhccc
Q 029277 117 -------------F-KSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQQ 182 (196)
Q Consensus 117 -------------~-~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~~ 182 (196)
+ ..+.........+|.+... ..|..+++|++++++.++...+.++.+++.+.+.+.+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~-------~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~g 140 (156)
T 1k2e_A 68 AVERPMPLVILEEVVKYPEETHIHFDLIYLVKRV-------GGDLKNGEWIDVREIDRIETFPNVRKVVSLALSTLYRLG 140 (156)
T ss_dssp EEECCCCSEEEEEEEECSSCEEEEEEEEEEEEEE-------EECCCSCEEEEGGGGGGSCBSTTHHHHHHHHHHHHHHHH
T ss_pred cccccccceeeeeeecCCCCceEEEEEEEEEEec-------CCcEeeeEEeCHHHHhcCCCChHHHHHHHHHHHHHHhhc
Confidence 0 1111111222334555432 235678999999999998888999999999988776554
No 22
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.86 E-value=2e-21 Score=157.73 Aligned_cols=135 Identities=19% Similarity=0.211 Sum_probs=102.8
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---CCCEEecCcccCC--CCCHHHHHHHHHHHhhceeeeeccee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEI--DESIQEAALRETIEEAGVTGIVECEL 111 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~---~~~W~lPgG~ve~--gEs~~~Aa~REl~EEtGl~~~~~~~~ 111 (196)
.+.++|+++|+..+ + ++.+|||+++.. .|.|.||||++++ |||+.+||+||++||||+.+.....
T Consensus 20 ~p~v~v~~vi~~~~---~------~~~~vLLv~R~~~~~~g~W~lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~~~~- 89 (240)
T 3gz5_A 20 AQLLTVDAVLFTYH---D------QQLKVLLVQRSNHPFLGLWGLPGGFIDETCDESLEQTVLRKLAEKTAVVPPYIEQ- 89 (240)
T ss_dssp -CEEEEEEEEEEEE---T------TEEEEEEEECCSSSSTTCEECSEEECCTTTCSBHHHHHHHHHHHHHSSCCSEEEE-
T ss_pred CCccEEEEEEEEEe---C------CCcEEEEEECcCCCCCCCEECCccccCCCCCcCHHHHHHHHHHHHHCCCCCceee-
Confidence 56688999998754 2 456999999875 3789999999999 9999999999999999999888777
Q ss_pred eeeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhcc
Q 029277 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 181 (196)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 181 (196)
++.+.............+.|.+...........+|..++.|++++++........++.++..++++++.+
T Consensus 90 l~~~~~~~r~~~~~~~~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~~~l~~dh~~il~~a~~rlr~k 159 (240)
T 3gz5_A 90 LCTVGNNSRDARGWSVTVCYTALMSYQACQIQIASVSDVKWWPLADVLQMPLAFDHLQLIEQARERLTQK 159 (240)
T ss_dssp EEEEEESSSSTTSCEEEEEEEEECCHHHHHHHHTTCTTEEEEEHHHHTTSCCSTTHHHHHHHHHHHHHHH
T ss_pred EEEeCCCccCCCceEEEEEEEEEecccccCCCCCcccceEEecHHHcccCCcchhHHHHHHHHHHHHHHh
Confidence 7777665444445566667776655432222345778999999999986544456788888888877664
No 23
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.86 E-value=8.2e-21 Score=140.85 Aligned_cols=121 Identities=21% Similarity=0.106 Sum_probs=91.6
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcC------CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceee
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELL 112 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~------~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l 112 (196)
..++++|+++.+ +|||++|.+ .|.|.||||+++.||++.+||.||++||||+.+..... +
T Consensus 6 ~~~v~~vi~~~~-------------~vLL~~r~~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~~~~-~ 71 (140)
T 3gwy_A 6 IEVVAAVIRLGE-------------KYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEK-L 71 (140)
T ss_dssp EEEEEEEEEETT-------------EEEEEEC---------CCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-E
T ss_pred EEEEEEEEEeCC-------------EEEEEEecCCCCCCCCCeEECCCccCCCCCCHHHHHHHHHHHhhCcEEEeceE-E
Confidence 446667776631 799999864 35799999999999999999999999999999988877 7
Q ss_pred eeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHH
Q 029277 113 GEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMR 177 (196)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 177 (196)
+.+.+... ......++|.+....... ...|..+++|++++++.++...+..+.+++.+.+.
T Consensus 72 ~~~~~~~~--~~~~~~~~f~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~~~~~~il~~~~~~ 132 (140)
T 3gwy_A 72 LTVHHTYP--DFEITMHAFLCHPVGQRY--VLKEHIAAQWLSTREMAILDWAEADKPIVRKISEQ 132 (140)
T ss_dssp EEEECCCS--SCCEEEEEEEEEECCSCC--CCCSSCEEEEECHHHHTTSCBCGGGHHHHHHHHC-
T ss_pred EEEEEEeC--CceEEEEEEEEEecCCcc--cccccceeEeccHHHHhhCCCCcccHHHHHHHHhC
Confidence 77665443 344556777777665422 23577899999999999998888888888765543
No 24
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.86 E-value=1.2e-21 Score=157.63 Aligned_cols=133 Identities=14% Similarity=0.194 Sum_probs=98.3
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~---~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
.++++|+++|+..+ + ++++|||+++.. .|.|.||||++++|||+.+||+||++||||+.+..... ++
T Consensus 11 ~p~v~v~~vi~~~~---~------~~~~vLLv~r~~~~~~g~w~lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-l~ 80 (226)
T 2fb1_A 11 TFYLGIDCIIFGFN---E------GEISLLLLKRNFEPAMGEWSLMGGFVQKDESVDDAAKRVLAELTGLENVYMEQ-VG 80 (226)
T ss_dssp CEEEEEEEEEEEEE---T------TEEEEEEEECSSSSSTTCEECEEEECCTTSCHHHHHHHHHHHHHCCCSCEEEE-EE
T ss_pred CCeEEEEEEEEEEe---C------CCCEEEEEECcCCCCCCCEECCeeccCCCCCHHHHHHHHHHHHHCCCCCceEE-EE
Confidence 56788999999754 2 456899999876 37899999999999999999999999999999887777 77
Q ss_pred eEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhcc
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 181 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 181 (196)
.+.........+...+.|.+.........+.+|..+++|++++++.++..+ ...++..++.+++.+
T Consensus 81 ~~~~~~r~~~~~~v~~~y~a~~~~~~~~~~~~e~~~~~W~~~~el~~l~~d--h~~il~~a~~rlr~~ 146 (226)
T 2fb1_A 81 AFGAIDRDPGERVVSIAYYALININEYDRELVQKHNAYWVNINELPALIFD--HPEMVDKAREMMKQK 146 (226)
T ss_dssp EECCTTSSSSSCEEEEEEEEECCTTSSCHHHHHHTTEEEEETTSCCCBSTT--HHHHHHHHHHHHHHH
T ss_pred EeCCCCcCCCceEEEEEEEEEecCcccccCCccccceEEEEHHHhhhccCC--HHHHHHHHHHHHHhh
Confidence 665433333344555567766554322223356789999999999876544 457777777766553
No 25
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.85 E-value=2.6e-21 Score=147.24 Aligned_cols=126 Identities=18% Similarity=0.156 Sum_probs=97.1
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC---CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~---~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
.++.++.+++++. +.++|||++|.+. |.|.||||++++||++.+||+||++||||+.+..... ++
T Consensus 8 ~~~~~v~~vi~~~-----------~~~~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~ 75 (161)
T 3exq_A 8 PVELVTMVMVTDP-----------ETQRVLVEDKVNVPWKAGHSFPGGHVEVGEPCATAAIREVFEETGLRLSGVTF-CG 75 (161)
T ss_dssp CEEEEEEEEEBCT-----------TTCCEEEECCCCCTTTCSBBCCCCBCCTTSCHHHHHHHHHHHHHCCEESCCEE-EE
T ss_pred CceEEEEEEEEeC-----------CCCEEEEEEccCCCCCCCEEccceecCCCCCHHHHHHHHHHHhhCcEecCCcE-EE
Confidence 3566777777664 2247999987753 5788999999999999999999999999999988777 78
Q ss_pred eEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHH
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 176 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 176 (196)
.+.+..+........++|.+...... ....|..+++|++++++.++...+..+.+++.+.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 136 (161)
T 3exq_A 76 TCEWFDDDRQHRKLGLLYRASNFTGT--LKASAEGQLSWLPITALTRENSAASLPEFLQVFTG 136 (161)
T ss_dssp EEEEECSSCSSEEEEEEEEECCEESC--CCGGGTTTEEEECGGGCCTTTBCTTHHHHHHHHTT
T ss_pred EEecccCCCCeEEEEEEEEEeccCCc--cCCCccceEEEeeHHHhhhCccChHHHHHHHHHhh
Confidence 77766644445566667776654432 22456688999999999998888888888877665
No 26
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.85 E-value=1e-20 Score=142.80 Aligned_cols=125 Identities=17% Similarity=0.142 Sum_probs=91.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHhhceeee--eccee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGI--VECEL 111 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~---~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~--~~~~~ 111 (196)
.++.+|++++++.+ ++|||+++.+ .|.|.||||++++||++.+||+||++||||+.+. ....
T Consensus 16 ~~~~~v~~vi~~~~------------~~vLl~~r~~~~~~g~w~~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~- 82 (160)
T 1rya_A 16 TPLVSLDFIVENSR------------GEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQF- 82 (160)
T ss_dssp SCEEEEEEEEECTT------------SCEEEEEECSSSSTTSEECCEEECCTTCCHHHHHHHHHHHHHSSCCCGGGSEE-
T ss_pred CcEEEEEEEEEcCC------------CEEEEEeccCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCCCCCcccceE-
Confidence 45678888888742 2799999876 4789999999999999999999999999999964 3444
Q ss_pred eeeEEeeeCCC------CceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhh-ccchhHHHHHHHH
Q 029277 112 LGEWNFKSRAH------NTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKV-CQHWWMKEALDRL 174 (196)
Q Consensus 112 l~~~~~~~~~~------~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~-~~~~~~~~~l~~~ 174 (196)
++.+.+..... ..+...++|.+.........+..|..+++|++++++.++ ...+..+++++..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~l~~~ 152 (160)
T 1rya_A 83 YGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAE 152 (160)
T ss_dssp EEEEEEEESSBTTBSSSCEEEEEEEEEEECCGGGCCCCSSSEEEEEEECHHHHHHCTTBCHHHHGGGCHH
T ss_pred EEEEeEEEcccccCCCcCcEEEEEEEEEEcCccccccCCCccceEEEecHHHHhhccccCHHHHHHHHHH
Confidence 66666544322 124556677777654433334567899999999999987 3456666666543
No 27
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.85 E-value=1.3e-20 Score=141.55 Aligned_cols=122 Identities=19% Similarity=0.285 Sum_probs=87.8
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC--CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeE
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW 115 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~--~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~ 115 (196)
++.+|++|+.+.+ +|||+++.. .+.|.||||+++.|||+.+||+||++||||+.+..... ++.+
T Consensus 4 p~~~v~~ii~~~~-------------~vLl~~r~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~ 69 (153)
T 3shd_A 4 PHVTVACVVHAEG-------------KFLVVEETINGKALWNQPAGHLEADETLVEAAARELWEETGISAQPQHF-IRMH 69 (153)
T ss_dssp CEEEEEEEEEETT-------------EEEEEEEEETTEEEEECSEEECCTTCCHHHHHHHHHHHHHCCCCCCCEE-EEEE
T ss_pred CceEEEEEEEeCC-------------EEEEEEecCCCCCCEECCeEEeCCCCCHHHHHHHHHHHHHCcccccCcE-EEEE
Confidence 4566666665531 799999853 36799999999999999999999999999999988777 7777
Q ss_pred EeeeCCCCceEEEEEEEEeecccc-ccCCcCccceeEEEeHHHHHhh--ccchhHHHHHHHH
Q 029277 116 NFKSRAHNTDYQGYMFPLLVQDQL-AEWPEKNVRSRKWMSVAEARKV--CQHWWMKEALDRL 174 (196)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~~-~~~~~~e~~~~~W~~~~el~~~--~~~~~~~~~l~~~ 174 (196)
.+..+. ......++|.+...... ....+.|..+++|++++++... ...+..+.++..+
T Consensus 70 ~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~ 130 (153)
T 3shd_A 70 QWIAPD-KTPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEILQASNLRSPLVAESIRCY 130 (153)
T ss_dssp EECCTT-SCCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHHHTCSCBSSTHHHHHHHHH
T ss_pred EEecCC-CceEEEEEEEEEccccCcCCCCcccceeeEEecHHHhhccccccCchHHHHHHHH
Confidence 665553 33455677877766543 2334567899999999999322 2345445555443
No 28
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.85 E-value=4.5e-21 Score=150.92 Aligned_cols=118 Identities=31% Similarity=0.574 Sum_probs=84.4
Q ss_pred ccCC-CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce
Q 029277 33 RYQK-GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE 110 (196)
Q Consensus 33 ~~~~-~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~ 110 (196)
.|.. .++..+++|+++.+ ++++|||+++.+ .+.|.||||++|+||++++||+||++||||+.+.....
T Consensus 33 ~~~~~~~~~~~~~vi~~~~----------~~~~vLLv~r~~~~g~W~lPgG~ve~gEt~~eaa~REl~EEtGl~~~~~~~ 102 (194)
T 2fvv_A 33 TYDGDGYKKRAACLCFRSE----------SEEEVLLVSSSRHPDRWIVPGGGMEPEEEPSVAAVREVCEEAGVKGTLGRL 102 (194)
T ss_dssp CBCTTSCEEEEEEEEESST----------TCCEEEEEECSSCTTSEECSEEECCTTCCHHHHHHHHHHHHHCEEEEEEEE
T ss_pred ccccCCccccEEEEEEEEC----------CCCEEEEEEEeCCCCcEECCCCcCCCCcCHHHHHHHHHHHHhCCccccceE
Confidence 4443 67888888888643 345899999865 47899999999999999999999999999999988776
Q ss_pred eeeeEEeeeCCCCceEEEEEEEEeeccccccCCc--CccceeEEEeHHHHHhhccch
Q 029277 111 LLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPE--KNVRSRKWMSVAEARKVCQHW 165 (196)
Q Consensus 111 ~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~--~e~~~~~W~~~~el~~~~~~~ 165 (196)
++.+.+. .. ....++|.+.........+. .+..+++|++++++.+++...
T Consensus 103 -l~~~~~~--~~--~~~~~~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~~ 154 (194)
T 2fvv_A 103 -VGIFENQ--ER--KHRTYVYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYH 154 (194)
T ss_dssp -EEEEEET--TT--TEEEEEEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTTT
T ss_pred -EEEEEcC--CC--ceEEEEEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhcC
Confidence 7776532 21 22345555554322211111 123689999999999886543
No 29
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.85 E-value=1.8e-20 Score=146.38 Aligned_cols=130 Identities=19% Similarity=0.200 Sum_probs=100.6
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~---~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
.++.+|++|+++.+ +|||+++.+ .+.|.||||+++.||++++||+||++||||+.+..... ++
T Consensus 38 ~~~~~v~~ii~~~~-------------~vLL~~r~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~ 103 (189)
T 3cng_A 38 NPKVIVGCIPEWEN-------------KVLLCKRAIAPYRGKWTLPAGFMENNETLVQGAARETLEEANARVEIREL-YA 103 (189)
T ss_dssp CCEEEEEEEEEETT-------------EEEEEEESSSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EE
T ss_pred CCceEEEEEEEeCC-------------EEEEEEccCCCCCCeEECceeeccCCCCHHHHHHHHHHHHHCCcccccee-EE
Confidence 46678888888732 799999876 47899999999999999999999999999999887665 65
Q ss_pred eEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHH-hhccchhHHHHHHHHHHHHhccccCC
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEAR-KVCQHWWMKEALDRLVMRLTSQQLHG 185 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~-~~~~~~~~~~~l~~~~~~l~~~~~~~ 185 (196)
.+.+. ......++|.+....... .+..|..+++|++++++. ..+..+..+.+|..+++....+.++.
T Consensus 104 ~~~~~----~~~~~~~~f~~~~~~~~~-~~~~E~~~~~W~~~~el~~~~l~~~~~~~~l~~~l~~~~~~~~~~ 171 (189)
T 3cng_A 104 VYSLP----HISQVYMLFRAKLLDLDF-FPGIESLEVRLFGEQEIPWNDIAFRVIHDPLKRYMEERHHGQPAF 171 (189)
T ss_dssp EEEEG----GGTEEEEEEEEEECCSCC-CCCTTEEEEEEECTTTCCGGGBSCHHHHHHHHHHHHHHHHSSCCC
T ss_pred EEecC----CCcEEEEEEEEEeCCCcc-CCCccceeEEEECHHHcCcccccChHHHHHHHHHHHhccCCCcce
Confidence 54432 223556677777654332 245678899999999998 45667888999998888777766653
No 30
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.85 E-value=5.2e-21 Score=146.47 Aligned_cols=123 Identities=15% Similarity=0.096 Sum_probs=90.0
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW 115 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~ 115 (196)
..+..|++|+++.+ +|||+++.+ .+.|.||||+++.||++.+||+||++||||+.+..... ++.+
T Consensus 21 ~~~~~v~~ii~~~~-------------~vLL~~r~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~ 86 (171)
T 3id9_A 21 IMQVRVTGILIEDE-------------KVLLVKQKVANRDWSLPGGRVENGETLEEAMIREMREETGLEVKIKKL-LYVC 86 (171)
T ss_dssp -CEEEEEEEEEETT-------------EEEEEECSSTTCCEECCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEE
T ss_pred ceEEEEEEEEEECC-------------EEEEEEEECCCCeEECCCccCCCCCCHHHHHHHHHHHHHCCccccceE-EEEE
Confidence 56777888887642 799999876 58899999999999999999999999999999987776 6666
Q ss_pred EeeeCCCCceEEEEEEEEeeccccccC-----CcCccceeEEEeHHHHHhhccchhHHHHHHHHH
Q 029277 116 NFKSRAHNTDYQGYMFPLLVQDQLAEW-----PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLV 175 (196)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~~~~~-----~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 175 (196)
.+... ......++|.+......... ..+|..+++|++++++.++...+.++.+++..+
T Consensus 87 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~~~~~~l~~~~ 149 (171)
T 3id9_A 87 DKPDA--SPSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYYGFSETFINLISGGL 149 (171)
T ss_dssp EETTS--SSCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGGTCCTTCSHHHHHGG
T ss_pred cccCC--CCcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhCCCCHHHHHHHHHhh
Confidence 54332 22334445655544332221 235678999999999999988888888877653
No 31
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.85 E-value=1.2e-20 Score=145.96 Aligned_cols=110 Identities=16% Similarity=0.028 Sum_probs=86.9
Q ss_pred EEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeeccccc
Q 029277 64 EVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA 140 (196)
Q Consensus 64 ~vLLv~~~~---~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 140 (196)
+|||+++.+ .|.|.||||++++||++.+||+||++||||+.+..... ++.+.+...........++|.+.......
T Consensus 37 ~vLL~~r~~~~~~g~W~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 115 (176)
T 3q93_A 37 RVLLGMKKRGFGAGRWNGFGGKVQEGETIEDGARRELQEESGLTVDALHK-VGQIVFEFVGEPELMDVHVFCTDSIQGTP 115 (176)
T ss_dssp EEEEEEECSSTTTTSEECEEEECCTTSCHHHHHHHHHHHHHSCEESCCEE-EEEEEEEETTCSCEEEEEEEEESCEESCC
T ss_pred EEEEEEEcCCCCCCeEECceecCCCCCCHHHHHHHHHHHHHCCcceeeEE-EEEEEEEcCCCCcEEEEEEEEEECCCCCc
Confidence 899998865 37899999999999999999999999999999987777 88877766654455566777776443322
Q ss_pred cCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHH
Q 029277 141 EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 176 (196)
Q Consensus 141 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 176 (196)
...+..+++|++++++..+...+..+.++..+++
T Consensus 116 --~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 149 (176)
T 3q93_A 116 --VESDEMRPCWFQLDQIPFKDMWPDDSYWFPLLLQ 149 (176)
T ss_dssp --CCCSSEEEEEEETTCCCGGGBCTTHHHHHHHHHT
T ss_pred --CCCcceeeEEeeHHHccccccCcchHHHHHHHHc
Confidence 2345677899999999988888888777766554
No 32
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.85 E-value=9.8e-21 Score=148.04 Aligned_cols=112 Identities=18% Similarity=0.157 Sum_probs=86.6
Q ss_pred EEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCc---eEEEEEEEEeeccccc
Q 029277 64 EVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNT---DYQGYMFPLLVQDQLA 140 (196)
Q Consensus 64 ~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~~~~ 140 (196)
+|||+++...|.|.+|||++++||++.+||+||++||||+.+..... ++.+.+....... .+..++|.+.......
T Consensus 16 ~vLL~~r~~~g~W~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~a~~~~~~~ 94 (188)
T 3fk9_A 16 QVLLLQKPRRGWWVAPGGKMEAGESILETVKREYWEETGITVKNPEL-KGIFSMVIFDEGKIVSEWMLFTFKATEHEGEM 94 (188)
T ss_dssp EEEEEECTTTCCEECCEEECCTTCCHHHHHHHHHHHHHSCEESSCEE-EEEEEEEEEETTEEEEEEEEEEEEESCEESCC
T ss_pred EEEEEEeCCCCeEECCeecccCCCCHHHHHHHHHHHHHCCCCCCceE-EEEEEEEecCCCcceEEEEEEEEEEECCCCCC
Confidence 79999988789999999999999999999999999999999988776 7777666543332 2245566665443322
Q ss_pred cCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHH
Q 029277 141 EWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMR 177 (196)
Q Consensus 141 ~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~ 177 (196)
.+..+..+++|++++++.++...+.++.++..+++.
T Consensus 95 -~~~~e~~~~~W~~~~el~~~~l~~~~~~~l~~~l~~ 130 (188)
T 3fk9_A 95 -LKQSPEGKLEWKKKDEVLELPMAAGDKWIFKHVLHS 130 (188)
T ss_dssp -CSEETTEEEEEEEGGGGGGSCCCHHHHHHHHHHTTC
T ss_pred -cCCCCCEeEEEEEHHHhhhCCCCHHHHHHHHHHHcC
Confidence 233455799999999999988888888888776553
No 33
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.84 E-value=3.2e-20 Score=138.79 Aligned_cols=111 Identities=19% Similarity=0.124 Sum_probs=89.3
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeecccc
Q 029277 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (196)
Q Consensus 64 ~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (196)
+|||++|... |.|.||||+++.||++.+||.||+.||||+.+..... ++.+.+..+. .....++|.+......
T Consensus 34 ~vLl~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 110 (153)
T 3ees_A 34 KILVGQRPENNSLAGQWEFPGGKIENGETPEEALARELNEELGIEAEVGEL-KLACTHSYGD--VGILILFYEILYWKGE 110 (153)
T ss_dssp EEEEEECCTTSTTTTCEECSEEECCTTCCHHHHHHHHHHHHHSCEEECCCE-EEEEEEEETT--EEEEEEEEEECEEESC
T ss_pred EEEEEEeCCCCCCCCeEECCceeeCCCCCHHHHHHHHHHHHHCCccccCce-EEEEEEecCC--CeEEEEEEEEEECCCC
Confidence 7999998764 7899999999999999999999999999999988877 7776665542 3344567776654432
Q ss_pred ccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHh
Q 029277 140 AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 179 (196)
Q Consensus 140 ~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 179 (196)
....|..++.|++++++.++...+.++.+++.+.+.+.
T Consensus 111 --~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 148 (153)
T 3ees_A 111 --PRAKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALG 148 (153)
T ss_dssp --CCCSSSSEEEEECGGGGGGSCCCHHHHTTHHHHHHHTT
T ss_pred --cCCCccceEEEecHHHhhhCCCCcchHHHHHHHHHhhc
Confidence 23456789999999999999888888999988877654
No 34
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.84 E-value=8.8e-20 Score=134.56 Aligned_cols=110 Identities=17% Similarity=0.071 Sum_probs=86.2
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeecccc
Q 029277 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (196)
Q Consensus 64 ~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (196)
+|||+++.+. |.|.||||+++.||++.+||.||++||||+.+..... ++.+.+..+. .....++|.+......
T Consensus 21 ~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 97 (140)
T 2rrk_A 21 KILLAQRPAQSDQAGLWEFAGGKVEPDESQRQALVRELREELGIEATVGEY-VASHQREVSG--RIIHLHAWHVPDFHGT 97 (140)
T ss_dssp EEEEEECCSSCSCCCCEECCEEECCTTSCHHHHHHHHHHHHSCEEEECCEE-EEEEEEEETT--EEEEEEEEEESEEEEC
T ss_pred EEEEEEcCCCCCCCCEEECCceecCCCCCHHHHHHHHHHHHHCCeeecccE-EEEEEEecCC--cEEEEEEEEEEeeCCC
Confidence 7999988653 7899999999999999999999999999999987766 7776665542 2344566766544322
Q ss_pred ccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHH
Q 029277 140 AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRL 178 (196)
Q Consensus 140 ~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 178 (196)
....|..++.|++++++.++...+.++.+++.+.+..
T Consensus 98 --~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~r 134 (140)
T 2rrk_A 98 --LQAHEHQALVWCSPEEALQYPLAPADIPLLEAFMALR 134 (140)
T ss_dssp --CCCSSCSCEEEECHHHHTTSCCCTTHHHHHHHHHHHH
T ss_pred --cCCCccceeEEeCHHHHhhCCCChhHHHHHHHHHHHh
Confidence 2234678899999999999988888889998887653
No 35
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.84 E-value=4.7e-20 Score=145.15 Aligned_cols=127 Identities=16% Similarity=0.190 Sum_probs=83.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC--CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~--~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~ 114 (196)
.++.+|++++++.+ +++|||++++. .+.|.||||++++||++.+||+||++||||+.+..... ++.
T Consensus 24 ~~~v~v~~~v~~~~-----------~~~vLL~~r~~~~~g~w~lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~~l-~~~ 91 (199)
T 3h95_A 24 SHQVGVAGAVFDES-----------TRKILVVQDRNKLKNMWKFPGGLSEPEEDIGDTAVREVFEETGIKSEFRSV-LSI 91 (199)
T ss_dssp --CCEEEEEEEETT-----------TTEEEEEEESSSSTTSBBCCEEECCTTCCHHHHHHHHHHHHHCCCEEEEEE-EEE
T ss_pred cccceEEEEEEeCC-----------CCEEEEEEEcCCCCCCEECCccccCCCCCHHHHHHHHHHHHhCCccccceE-EEE
Confidence 55677888888753 34899999876 48899999999999999999999999999999887666 553
Q ss_pred EE-eeeCCCCceEEEEEEEEeecc--ccccCCcCccceeEEEeHHHHHhhccchhH-HHHHHHHHH
Q 029277 115 WN-FKSRAHNTDYQGYMFPLLVQD--QLAEWPEKNVRSRKWMSVAEARKVCQHWWM-KEALDRLVM 176 (196)
Q Consensus 115 ~~-~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~e~~~~~W~~~~el~~~~~~~~~-~~~l~~~~~ 176 (196)
.. +..+. .......+|.+.... ......++|..+++|++++++.++.....+ +.++..+..
T Consensus 92 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~~~ 156 (199)
T 3h95_A 92 RQQHTNPG-AFGKSDMYIICRLKPYSFTINFCQEECLRCEWMDLNDLAKTENTTPITSRVARLLLY 156 (199)
T ss_dssp EECC----------CEEEEEEEEESCCCCCCCTTTEEEEEEEEHHHHHHCSSBCHHHHHHHHHHHH
T ss_pred EeeecCCC-CceeEEEEEEEEEcCCCcccCCCccceeeeEEEeHHHHhhhhhcChHHHHHHHHHHh
Confidence 22 22221 112223344444332 222334567899999999999987554433 333433333
No 36
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.83 E-value=3.7e-20 Score=140.00 Aligned_cols=111 Identities=18% Similarity=0.091 Sum_probs=84.0
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce-eeeeEEeeeCCCCceEEEEEEEEeeccc
Q 029277 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE-LLGEWNFKSRAHNTDYQGYMFPLLVQDQ 138 (196)
Q Consensus 64 ~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-~l~~~~~~~~~~~~~~~~~~f~~~~~~~ 138 (196)
+|||++|... |.|.||||+++.||++.+||+||++||||+.+....+ .++.+.+.. .......++|.+.....
T Consensus 42 ~vLL~~r~~~~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 119 (158)
T 3hhj_A 42 RVLLTQRPEGKSLAGLWEFPGGKVEQGETPEASLIRELEEELGVHVQADNLFPLTFASHGY--ETFHLLMPLYFCSHYKG 119 (158)
T ss_dssp EEEEEECCCTTSCCCCCBCCEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEEEEEEEC--SSCEEEEEEEEESCCBS
T ss_pred EEEEEEeCCCCCCCCEEECCceeecCCCCHHHHHHHHHHHHhCcEeecceEEEEEEEeecc--CCcEEEEEEEEEEECCC
Confidence 7999998753 6899999999999999999999999999999877653 133333333 23345566777665443
Q ss_pred cccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHH
Q 029277 139 LAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRL 178 (196)
Q Consensus 139 ~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l 178 (196)
. ....|..+++|++++++.++...+.++.+++.+.+++
T Consensus 120 ~--~~~~e~~~~~W~~~~el~~~~~~~~~~~il~~~~~~l 157 (158)
T 3hhj_A 120 V--AQGREGQNLKWIFINDLDKYPMPEADKPLVQVLKNFF 157 (158)
T ss_dssp C--CCCTTSCEEEEEEGGGGGGSCCCTTTHHHHHHHHHC-
T ss_pred c--cCCccccceEEEcHHHHhhCCCCcchHHHHHHHHHhc
Confidence 2 2345678999999999999988888899988876643
No 37
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.83 E-value=3.5e-20 Score=137.53 Aligned_cols=125 Identities=18% Similarity=0.079 Sum_probs=90.9
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce-eee
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE-LLG 113 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-~l~ 113 (196)
+.++++++++.+ ++|||++|... |.|.||||+++.||++.+||.||++||||+.+..... .++
T Consensus 8 ~~~~~~vi~~~~------------~~vLl~~r~~~~~~~g~w~lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~~~~~~ 75 (144)
T 3r03_A 8 LLVTAAALIDPD------------GRVLLAQRPPGKSLAGLWEFPGGKLEPGETPEAALVRELAEELGVDTRASCLAPLA 75 (144)
T ss_dssp EEEEEEEEBCTT------------SCEEEEECCTTSSSTTCEECSEEECCTTCCHHHHHHHHHHHHHCCBCCGGGCEEEE
T ss_pred eEEEEEEEEcCC------------CEEEEEEeCCCCCCCCcEECCCcEecCCCCHHHHHHHHHHHHhCceeeccceEEEE
Confidence 445556666542 27999998754 7899999999999999999999999999999887653 133
Q ss_pred eEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHh
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLT 179 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~ 179 (196)
.+.+.. .......++|.+...... ....|..+++|++++++.++...+.++.+++.+.+...
T Consensus 76 ~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~~~ 137 (144)
T 3r03_A 76 FASHSY--DTFHLLMPLYACRSWRGR--ATAREGQTLAWVRAERLREYPMPPADLPLIPILQDWLE 137 (144)
T ss_dssp EEEEEC--SSSEEEEEEEEECCCBSC--CCCCSSCEEEEECGGGGGGSCCCTTTTTHHHHHHHHC-
T ss_pred eeeccC--CCeEEEEEEEEEEecCCc--cCCCCcceEEEEeHHHhccCCCCcchHHHHHHHhCccc
Confidence 333332 334455667777655432 22456789999999999999888888888877665543
No 38
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.83 E-value=1.3e-20 Score=142.13 Aligned_cols=112 Identities=20% Similarity=0.232 Sum_probs=76.8
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeE--
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW-- 115 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~-- 115 (196)
.+.+|++++++.+ ++|||++|. .+.|.||||++++||++.+||+||++||||+.+..... ++.+
T Consensus 20 ~~~~v~~ii~~~~------------~~vLL~~r~-~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-~~~~~~ 85 (153)
T 3eds_A 20 FXPSVAAVIKNEQ------------GEILFQYPG-GEYWSLPAGAIELGETPEEAVVREVWEETGLKVQVKKQ-KGVFGG 85 (153)
T ss_dssp EEEEEEEEEBCTT------------CCEEEECC----CBBCSEEECCTTSCHHHHHHHHHHHHHCEEEEEEEE-EEEECS
T ss_pred EeeeEEEEEEcCC------------CeEEEEEcC-CCcEECCccccCCCCCHHHHHHHHHHHHHCccceeeeE-EEEecc
Confidence 4556667766532 379998877 78899999999999999999999999999999988776 7665
Q ss_pred ---EeeeCCCCc-eEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhcc
Q 029277 116 ---NFKSRAHNT-DYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQ 163 (196)
Q Consensus 116 ---~~~~~~~~~-~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~ 163 (196)
.+..+.... ....++|.+..........++|..+++|++++++.++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 86 KEYRYTYSNGDEVEYIVVVFECEVTSGELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp GGGEEECTTSCEEEEEEEEEEEEEEEECCC-------CEEEECGGGCCCBSS
T ss_pred cceeeecCCCCeEEEEEEEEEEEecCCccccCCCcEEEEEEECHHHCchhcc
Confidence 233333222 345667777765544444456778999999999988753
No 39
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.83 E-value=3.2e-19 Score=137.52 Aligned_cols=128 Identities=22% Similarity=0.233 Sum_probs=89.8
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-----CCCEEe-cCcccCCCCCHHHHHHHHHHHhhceeeeeccee
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLF-PKGGWEIDESIQEAALRETIEEAGVTGIVECEL 111 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-----~~~W~l-PgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~ 111 (196)
.+.++++++++.+ ++|||.+|.. .|.|.| |||+++.||++.+||+||++||||+.+.....
T Consensus 36 ~~~~~~v~i~~~~------------~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~aa~REl~EEtGl~~~~~~~- 102 (180)
T 2fkb_A 36 RHRATYIVVHDGM------------GKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE- 102 (180)
T ss_dssp CEEEEEEEEECSS------------SCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHHHHHHHHHHHHCCBSCCCEE-
T ss_pred eeeEEEEEEECCC------------CEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHHHHHHHHHHHHCCCccceEE-
Confidence 3456666666542 2699888754 257999 99999999999999999999999998776665
Q ss_pred eeeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhc--cchhHHHHHHHHHHHHhcc
Q 029277 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVC--QHWWMKEALDRLVMRLTSQ 181 (196)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~--~~~~~~~~l~~~~~~l~~~ 181 (196)
++.+.+... ......++|.+... ........|+.+++|++++++.+++ ..+..+.++..++......
T Consensus 103 l~~~~~~~~--~~~~~~~~f~~~~~-~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~l~~~~~~~~~~ 171 (180)
T 2fkb_A 103 HGQFYFEDK--NCRVWGALFSCVSH-GPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMKRNAKN 171 (180)
T ss_dssp EEEEEEEET--TEEEEEEEEEEECC-CCCCCCTTTEEEEEEECHHHHHTTGGGBCHHHHHHHHHHHHHC---
T ss_pred EEEEEecCC--CceEEEEEEEEecC-CCcCCChhHhheEEEecHHHHHHHHHHhCCcHHHHHHHHHHhhcCC
Confidence 666655433 23445566766632 2222345678999999999999984 3567777777776655444
No 40
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.83 E-value=1.2e-19 Score=138.05 Aligned_cols=109 Identities=17% Similarity=0.037 Sum_probs=76.4
Q ss_pred EEEEEEEcCC-----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeE------EeeeCCCCc---eEEEE
Q 029277 64 EVLVISSQKG-----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW------NFKSRAHNT---DYQGY 129 (196)
Q Consensus 64 ~vLLv~~~~~-----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~------~~~~~~~~~---~~~~~ 129 (196)
+|||++|... |.|.||||+++.||++.+||+||++||||+.+..... ++.. .+.++.... ....+
T Consensus 40 ~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (165)
T 3oga_A 40 CYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDI-TPWTFRDDIRIKTYADGRQEEIYMIYL 118 (165)
T ss_dssp EEEEEEECC------CCEECCCEECCTTCCHHHHHHHHHHHHHCSSCCEEEE-EEEEEEEEEEEEEC--CCEEEEEEEEE
T ss_pred EEEEEEecCCCCCCCCeEECCccccCCCCCHHHHHHHHHHHHhCCCccccce-eeeeeecceeeEecCCCCceeEEEEEE
Confidence 7999988743 6799999999999999999999999999999876554 3311 122222221 11233
Q ss_pred EEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHH
Q 029277 130 MFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRL 174 (196)
Q Consensus 130 ~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 174 (196)
+|.+........ +.+|..+++|++++++.++...+..+.+++.+
T Consensus 119 ~~~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~~~~~~~l~~~ 162 (165)
T 3oga_A 119 IFDCVSANRDIC-INDEFQDYAWVKPEELALYDLNVATRHTLALK 162 (165)
T ss_dssp EEEEEESCCCCC-CCTTEEEEEEECGGGGGGSCBCHHHHHHHHHT
T ss_pred EEEeeccCCCcc-CCchheeeEEccHHHHhhCCCCHHHHHHHHHh
Confidence 444444433222 34577899999999999998888888887653
No 41
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.82 E-value=4.2e-20 Score=138.98 Aligned_cols=113 Identities=12% Similarity=0.099 Sum_probs=83.1
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~ 116 (196)
.++.++++++++.+ +|||+++ .+.|.||||++++||++.+||+||++||||+.+..... ++.+.
T Consensus 17 ~~~~~~~~ii~~~~-------------~vLl~~r--~~~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~~~~ 80 (154)
T 2pqv_A 17 VFGVRATALIVQNH-------------KLLVTKD--KGKYYTIGGAIQVNESTEDAVVREVKEELGVKAQAGQL-AFVVE 80 (154)
T ss_dssp EEEEEEEECCEETT-------------EEEEEEE--TTEEECEEEECBTTCCHHHHHHHHHHHHHCCCEEEEEE-EEEEE
T ss_pred eEeEEEEEEEEECC-------------EEEEEec--CCeEECcccCcCCCCCHHHHHHHHHHHHhCCeeeeceE-EEEEe
Confidence 45677888887632 7999998 68899999999999999999999999999999887766 66655
Q ss_pred eeeCCCCc--eEEEEEEEEeecccccc--CCcCccceeEEEeHHHHHhhccch
Q 029277 117 FKSRAHNT--DYQGYMFPLLVQDQLAE--WPEKNVRSRKWMSVAEARKVCQHW 165 (196)
Q Consensus 117 ~~~~~~~~--~~~~~~f~~~~~~~~~~--~~~~e~~~~~W~~~~el~~~~~~~ 165 (196)
+....... +...++|.+........ .+++|..+++|++++++.++...+
T Consensus 81 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~ 133 (154)
T 2pqv_A 81 NRFEVDGVSYHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNIQLVP 133 (154)
T ss_dssp EEEEETTEEEEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGSCEES
T ss_pred eeecCCCCcceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhcCcCc
Confidence 43332222 33455677766543221 234457899999999999875444
No 42
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.82 E-value=2.7e-19 Score=133.82 Aligned_cols=112 Identities=20% Similarity=0.146 Sum_probs=73.5
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeee
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~ 114 (196)
+.+|++++++.+ +++||+++++. +.|+||||++|+|||+++||+||++||||+.+..... ++.
T Consensus 5 ~~~v~vi~~~~~------------~~vLLv~~~r~~~~~~~w~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~-l~~ 71 (145)
T 2w4e_A 5 PRAVFILPVTAQ------------GEAVLIRQFRYPLRATITEIVAGGVEKGEDLGAAAARELLEEVGGAASEWVP-LPG 71 (145)
T ss_dssp CEEEEEEEEETT------------SEEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHCEECSEEEE-CCC
T ss_pred CCEEEEEEEcCC------------CEEEEEEEEecCCCCCEEEeCCccCCCCCCHHHHHHHHHHHhhCCccCeEEE-Eec
Confidence 357777777643 27988875432 3799999999999999999999999999999876655 554
Q ss_pred EEeeeCCCCceEEEEEEEEee-ccccccCCcCccceeEEEeHHHHHhhccch
Q 029277 115 WNFKSRAHNTDYQGYMFPLLV-QDQLAEWPEKNVRSRKWMSVAEARKVCQHW 165 (196)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~e~~~~~W~~~~el~~~~~~~ 165 (196)
+ +..+. ......++|.+.. ........++|..+++|++++++.+++..+
T Consensus 72 ~-~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~ 121 (145)
T 2w4e_A 72 F-YPQPS-ISGVVFYPLLALGVTLGAAQLEDTETIERVVLPLAEVYRMLEAG 121 (145)
T ss_dssp B-BSCTT-TCCCEEEEEEEEEEEEC--------CEEEEEEEHHHHHHHHHHT
T ss_pred C-cCCCC-ccCceEEEEEEEecccCCCCCCCCCeEEEEEEeHHHHHHHHHcC
Confidence 3 22221 1223345555542 222222345677999999999999886543
No 43
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.82 E-value=2.8e-19 Score=136.75 Aligned_cols=129 Identities=19% Similarity=0.194 Sum_probs=89.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWN 116 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~ 116 (196)
.+|.+|++++++.+ ++|||+++...+.|.+|||+++.||++.+||.||++||||+.+..... ++.+.
T Consensus 6 ~~~~~v~~~i~~~~------------~~vLl~~r~~~~~w~~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~~~~-~~~~~ 72 (164)
T 2kdv_A 6 GYRPNVGIVICNRQ------------GQVMWARRFGQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRI-LASTR 72 (164)
T ss_dssp SEEEEEEEEEECTT------------SEEEEEEETTCCCEECCEEECCTTCCHHHHHHHHHHHHHCCCGGGEEE-EEECS
T ss_pred CCCcEEEEEEEccC------------CEEEEEEEcCCCeEECCeeecCCCCCHHHHHHHHHHHHHCCCccceEE-EEEec
Confidence 56888999988753 279999988778999999999999999999999999999999876655 55432
Q ss_pred ----eeeCCC---------CceEEEEEEEEeecccccc-----CCcCccceeEEEeHHHHHhhcc---chhHHHHHHHHH
Q 029277 117 ----FKSRAH---------NTDYQGYMFPLLVQDQLAE-----WPEKNVRSRKWMSVAEARKVCQ---HWWMKEALDRLV 175 (196)
Q Consensus 117 ----~~~~~~---------~~~~~~~~f~~~~~~~~~~-----~~~~e~~~~~W~~~~el~~~~~---~~~~~~~l~~~~ 175 (196)
|..+.. ......++|.+........ .+..|+.+++|++++++.+.+. .+.++.++..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l~~~~~~~~~~~l~~l~ 152 (164)
T 2kdv_A 73 NWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFA 152 (164)
T ss_dssp SCEEEECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGSCHHHHHHHHHHHHHHH
T ss_pred ceeEEecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhhhhhhHHHHHHHHHHHH
Confidence 332221 1123456777775543211 1235789999999999866533 233444444444
Q ss_pred HHH
Q 029277 176 MRL 178 (196)
Q Consensus 176 ~~l 178 (196)
..+
T Consensus 153 ~~l 155 (164)
T 2kdv_A 153 SVV 155 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 44
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.81 E-value=2.6e-19 Score=134.60 Aligned_cols=127 Identities=16% Similarity=0.163 Sum_probs=89.8
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC--CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG--KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE 114 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~--~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~ 114 (196)
..+.++++++++.+ . ++..+||++|... ..|.||||++++||++.+||+||++||||+.+..... ++.
T Consensus 6 ~~~~~~~~ii~~~~---~------~~~~vLl~~r~~~~~~gw~lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~-~~~ 75 (155)
T 2b06_A 6 LTILTNICLIEDLE---T------QRVVMQYRAPENNRWSGYAFPGGHVENDEAFAESVIREIYEETGLTIQNPQL-VGI 75 (155)
T ss_dssp CEEEEEEEEEEETT---T------TEEEEEEEC-----CCEEECCCCBCCTTSCHHHHHHHHHHHHHSEEEESCEE-EEE
T ss_pred CcEEEEEEEEEECC---C------CeEEEEEEECCCCCCCCEeccceecCCCCCHHHHHHHHHHHHhCccccCCcE-EEE
Confidence 35677888887742 1 2233777776543 2389999999999999999999999999999988776 776
Q ss_pred EEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHH
Q 029277 115 WNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 176 (196)
Q Consensus 115 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 176 (196)
+.+... .......++|.+....... ...|..+++|++++++.++...+.++.+++.+..
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 134 (155)
T 2b06_A 76 KNWPLD-TGGRYIVICYKATEFSGTL--QSSEEGEVSWVQKDQIPNLNLAYDMLPLMEMMEA 134 (155)
T ss_dssp EEEECT-TSCEEEEEEEEECEEEECC--CCBTTBEEEEEEGGGGGGSCBCTTHHHHHHHHHC
T ss_pred EeeccC-CCceEEEEEEEEEecCCCC--CCCcceeeEEeeHHHhhhCCCChhHHHHHHHHhC
Confidence 665543 2344556677665543321 2356789999999999999888888887765553
No 45
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.81 E-value=9.9e-20 Score=135.64 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=75.2
Q ss_pred EEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeC
Q 029277 41 VVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSR 120 (196)
Q Consensus 41 ~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~ 120 (196)
++++++++.+ .++|||+++...|.|.||||++++|||+.+||+||++||||+.+..... +..+.....
T Consensus 6 ~~~~~i~~~~-----------~~~vLl~~r~~~g~w~~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~~-~~~~~~~~~ 73 (146)
T 2jvb_A 6 VRGAAIFNEN-----------LSKILLVQGTESDSWSFPRGKISKDENDIDCCIREVKEEIGFDLTDYID-DNQFIERNI 73 (146)
T ss_dssp CEEEEEBCTT-----------SSEEEEECCSSSSCCBCCEECCCSSSCHHHHHHHHHHHHTSCCCSSSSC-SSCEEEEEE
T ss_pred EEEEEEEeCC-----------CCEEEEEEEcCCCcEECCcccCCCCCCHHHHHHHHHHHHHCCCchHhcc-ccccccccc
Confidence 4667777642 2489999987778999999999999999999999999999999875433 333322211
Q ss_pred CCCceEEEEEEEEee-ccc--cccCCcCccceeEEEeHHHHHhhccch
Q 029277 121 AHNTDYQGYMFPLLV-QDQ--LAEWPEKNVRSRKWMSVAEARKVCQHW 165 (196)
Q Consensus 121 ~~~~~~~~~~f~~~~-~~~--~~~~~~~e~~~~~W~~~~el~~~~~~~ 165 (196)
. +. ..++|.+.. ... ....+++|+.+++|++++++.+++...
T Consensus 74 ~-~~--~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 118 (146)
T 2jvb_A 74 Q-GK--NYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKS 118 (146)
T ss_dssp T-TE--EEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCS
T ss_pred C-Cc--eEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhccc
Confidence 1 11 223333322 211 112235678999999999999886554
No 46
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.81 E-value=1.1e-19 Score=137.56 Aligned_cols=130 Identities=17% Similarity=0.209 Sum_probs=85.9
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeee-
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGE- 114 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~- 114 (196)
.+|.++++++++.+ ++|||++|.. .|.|.+|||+++.||++++||+||++||||+.+.........
T Consensus 12 ~~~~~v~~~i~~~~------------~~vLl~~r~~~~g~w~~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~ 79 (165)
T 1f3y_A 12 GYRRNVGICLMNND------------KKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYW 79 (165)
T ss_dssp SCCCEEEEEEECTT------------SCEEEEEETTEEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCSEEEEEECSSC
T ss_pred ceeeeEEEEEECCC------------CcEEEEecCCCCCcEECCeeccCCCCCHHHHHHHHHHHhhCCChhhhhcccccc
Confidence 56788888888643 2799999875 378999999999999999999999999999986432110100
Q ss_pred EEeeeCCC------------CceEEEEEEEEeecccc--ccC-----CcCccceeEEEeHHHHHhhccchhHHHHHHHHH
Q 029277 115 WNFKSRAH------------NTDYQGYMFPLLVQDQL--AEW-----PEKNVRSRKWMSVAEARKVCQHWWMKEALDRLV 175 (196)
Q Consensus 115 ~~~~~~~~------------~~~~~~~~f~~~~~~~~--~~~-----~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~ 175 (196)
+.+..+.. ......++|.+...... ... +..|..+++|++++++.+++... ....++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~~~~~~ 158 (165)
T 1f3y_A 80 LTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVEF-KKPVYKEVL 158 (165)
T ss_dssp CBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCGG-GHHHHHHHH
T ss_pred eeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhhh-hHHHHHHHH
Confidence 11111100 00113445666554321 111 34578999999999999987542 455666666
Q ss_pred HHHh
Q 029277 176 MRLT 179 (196)
Q Consensus 176 ~~l~ 179 (196)
..+.
T Consensus 159 ~~l~ 162 (165)
T 1f3y_A 159 SVFA 162 (165)
T ss_dssp HHHG
T ss_pred HHhh
Confidence 6554
No 47
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.81 E-value=2.1e-19 Score=137.66 Aligned_cols=107 Identities=19% Similarity=0.111 Sum_probs=77.3
Q ss_pred EEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeeccccccCC
Q 029277 64 EVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWP 143 (196)
Q Consensus 64 ~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 143 (196)
++||++++ .|.|.||||++++||++.+||+||++||||+.+..... ++.+.+ +. ...++|.+.... . ..+
T Consensus 28 ~vLL~~r~-~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l~~~~~--~~----~~~~~f~~~~~~-~-~~~ 97 (163)
T 3f13_A 28 GVLVTASR-GGRYNLPGGKANRGELRSQALIREIREETGLRINSMLY-LFDHIT--PF----NAHKVYLCIAQG-Q-PKP 97 (163)
T ss_dssp EEEEEECC----BBCSEEECCTTCCHHHHHHHHHHHHHCCCCCEEEE-EEEEEC--SS----EEEEEEEEEC-C-C-CCC
T ss_pred EEEEEEEC-CCeEECCceeCCCCCCHHHHHHHHHHHHHCcccceeEE-EEEEec--CC----eEEEEEEEEECC-c-Ccc
Confidence 69999876 58899999999999999999999999999999888776 665543 21 345566665432 2 223
Q ss_pred cCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhcc
Q 029277 144 EKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTSQ 181 (196)
Q Consensus 144 ~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~~ 181 (196)
.+|+.+++|++ .+.......+..+.++..+.......
T Consensus 98 ~~E~~~~~W~~-~~~~~~~l~~~~~~il~~~~~~~~~~ 134 (163)
T 3f13_A 98 QNEIERIALVS-SPDTDMDLFVEGRAILRRYARLRNEE 134 (163)
T ss_dssp CTTCCEEEEES-STTCSSCBCHHHHHHHHHHHHHTTCS
T ss_pred CCCceEEEEEC-cccccCCCCHHHHHHHHHHHHhhhcc
Confidence 44789999999 45555556678888888877765443
No 48
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.80 E-value=5.4e-19 Score=137.81 Aligned_cols=128 Identities=14% Similarity=0.097 Sum_probs=89.3
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-----CCCEEe-cCcccCCCCCHHHHHHHHHHHhhceeeeec-ce
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLF-PKGGWEIDESIQEAALRETIEEAGVTGIVE-CE 110 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-----~~~W~l-PgG~ve~gEs~~~Aa~REl~EEtGl~~~~~-~~ 110 (196)
.+.++++++++.+ +++||++|.. .|.|.+ |||+++.||++++||+||++||||+.+... ..
T Consensus 31 ~~~~v~~~i~~~~------------g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~~aa~REl~EEtGl~~~~~~~~ 98 (190)
T 1hzt_A 31 LHLAFSSWLFNAK------------GQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESI 98 (190)
T ss_dssp CEECEEEEEECTT------------CCEEEEEECTTCSSSTTCEEESEEECCCTTCCHHHHHHHHHHHHHCCCBSCCEEE
T ss_pred eEEEEEEEEEcCC------------CEEEEEEeCCCCCCCCCcccCcccccCCCCCCHHHHHHHHHHHHHCCCchhhhee
Confidence 3456777777642 2799998854 378999 999999999999999999999999998776 54
Q ss_pred eeeeEEeeeCCC--C-ceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhc------cchhHHHHHHHHHHHHh
Q 029277 111 LLGEWNFKSRAH--N-TDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVC------QHWWMKEALDRLVMRLT 179 (196)
Q Consensus 111 ~l~~~~~~~~~~--~-~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~------~~~~~~~~l~~~~~~l~ 179 (196)
++.+.+..... . .....++|.+..... .....+|..+++|++++++.+++ ..+.++.+++.+.++.+
T Consensus 99 -~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~p~~~~~~~~~~~~~~ 174 (190)
T 1hzt_A 99 -YPDFRYRATDPSGIVENEVCPVFAARTTSA-LQINDDEVMDYQWCDLADVLHGIDATPWAFSPWMVMQATNREARKR 174 (190)
T ss_dssp -ETTCEEEEECTTSCEEEEECCEEEEEBCSC-CCCCTTTEEEEEEECHHHHHHHHHHCGGGBCHHHHHHHHSHHHHHH
T ss_pred -eeeEEEEeeCCCCCcceEEEEEEEEecCCC-CcCCccceeeEEEecHHHHHHHHHcChhhcCchHHHHHHHHHHHHh
Confidence 65555433221 1 234456676665432 22235678999999999998874 34555666666555443
No 49
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.79 E-value=4e-19 Score=149.84 Aligned_cols=127 Identities=15% Similarity=0.098 Sum_probs=86.4
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK---GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~---~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
..+.+|++++++.+ +|||+++.+ .|.|.+|||++|+||++++||+||++||||+.+..... ++
T Consensus 201 ~~~~~v~~vi~~~~-------------~vLL~~r~~~~~~g~w~lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~-~~ 266 (341)
T 2qjo_A 201 PTFITTDAVVVQAG-------------HVLMVRRQAKPGLGLIALPGGFIKQNETLVEGMLRELKEETRLKVPLPVL-RG 266 (341)
T ss_dssp CCEEEEEEEEEETT-------------EEEEEECCSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSSCHHHH-HH
T ss_pred CCceEEEEEEEeCC-------------EEEEEEecCCCCCCeEECCCCcCCCCCCHHHHHHHHHhhhhCCccccccc-cc
Confidence 44678888888532 799999875 47899999999999999999999999999999876544 32
Q ss_pred ----eEEeeeCCC--CceEEEEEEEEeeccccc-c-CCcCccceeEEEeHHHHHhh--ccchhHHHHHHHHHHH
Q 029277 114 ----EWNFKSRAH--NTDYQGYMFPLLVQDQLA-E-WPEKNVRSRKWMSVAEARKV--CQHWWMKEALDRLVMR 177 (196)
Q Consensus 114 ----~~~~~~~~~--~~~~~~~~f~~~~~~~~~-~-~~~~e~~~~~W~~~~el~~~--~~~~~~~~~l~~~~~~ 177 (196)
...+..+.. ......++|.+....... . .+++|..+++|++++++.++ ...+.++.++..++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~~il~~~~~~ 340 (341)
T 2qjo_A 267 SIVDSHVFDAPGRSLRGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQEEQIYEDHFQIIQHFVSK 340 (341)
T ss_dssp TEEEEEEECCTTSCTTSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHTGGGBCTTHHHHHHHHC--
T ss_pred cccceEEEeCCCCCCCCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhhhhhhchHHHHHHHHHHhc
Confidence 223332222 223445566666543321 1 24467799999999999987 6677788888776543
No 50
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.79 E-value=4.5e-19 Score=146.42 Aligned_cols=137 Identities=18% Similarity=0.201 Sum_probs=95.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC---CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce-ee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE-LL 112 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~---~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-~l 112 (196)
.++++|+++|+..+..+ ++.+|||+++... |.|.||||++++||++++||+||++||||+.+..... .+
T Consensus 37 ~p~v~v~~vv~~~~~~~-------~~~~VLLv~R~~~p~~g~W~lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~~l~~l 109 (273)
T 2fml_A 37 KPSLTVDMVLLCYNKEA-------DQLKVLLIQRKGHPFRNSWALPGGFVNRNESTEDSVLRETKEETGVVISQENIEQL 109 (273)
T ss_dssp CCEEEEEEEEEEEETTT-------TEEEEEEEEECSSSSTTCEECCEEECCTTSCHHHHHHHHHHHHHCCCCCGGGEEEE
T ss_pred CCceEEEEEEEEEcCCC-------CCcEEEEEEccCCCCCCcEECCccCCCCCcCHHHHHHHHHHHHHCCCCCcCcEEEE
Confidence 56789999999875110 1568999998763 7899999999999999999999999999987665332 13
Q ss_pred eeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhc-----------------------cchhHHH
Q 029277 113 GEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVC-----------------------QHWWMKE 169 (196)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~-----------------------~~~~~~~ 169 (196)
+.+.....+...+...++|.+...... ..+.+|..++.|++++++.+.+ ....+..
T Consensus 110 ~~~~~~~r~~~~~~~~~~y~a~~~~~~-~~~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~LafdH~~ 188 (273)
T 2fml_A 110 HSFSRPDRDPRGWVVTVSYLAFIGEEP-LIAGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDHSE 188 (273)
T ss_dssp EEECCTTSSTTSSEEEEEEEEECCCCC-CCCCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSSCCSTTHHH
T ss_pred EEEcCCCCCCCceEEEEEEEEEeCCCC-CCCCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCCcccccHHH
Confidence 433322222223456667777665433 3455678999999999864432 1234567
Q ss_pred HHHHHHHHHhcc
Q 029277 170 ALDRLVMRLTSQ 181 (196)
Q Consensus 170 ~l~~~~~~l~~~ 181 (196)
++..++.+++.+
T Consensus 189 Il~~al~rlr~k 200 (273)
T 2fml_A 189 IIIKAFNRVVDK 200 (273)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777654
No 51
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.78 E-value=1.2e-18 Score=143.67 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=86.7
Q ss_pred EEEEEEEcC--CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeecccccc
Q 029277 64 EVLVISSQK--GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAE 141 (196)
Q Consensus 64 ~vLLv~~~~--~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 141 (196)
+|||+++.+ .|.|.||||++|+|||+++||+||++||||+.+..... ++.+.+.++ ....++|.+........
T Consensus 152 ~vLL~rr~~~~~g~w~lPgG~vE~GEt~eeAa~REv~EEtGl~v~~~~~-~~~~~~~~~----~~~~~~f~a~~~~~~~~ 226 (269)
T 1vk6_A 152 SILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRY-VTSQPWPFP----QSLMTAFMAEYDSGDIV 226 (269)
T ss_dssp EEEEEEETTTCSSCCBCEEEECCTTCCHHHHHHHHHHHHHCCEEEEEEE-EEEEEEETT----EEEEEEEEEEEEECCCC
T ss_pred EEEEEEecCCCCCcEECCcCcCCCCCCHHHHHHHHHHHHhCceeeeEEE-EEEEecCCC----CEEEEEEEEEECCCCcC
Confidence 899999875 37899999999999999999999999999999988777 776655433 23556777766543333
Q ss_pred CCcCccceeEEEeHHHHHhhccchhH-HHHHHHHHHHHhcc
Q 029277 142 WPEKNVRSRKWMSVAEARKVCQHWWM-KEALDRLVMRLTSQ 181 (196)
Q Consensus 142 ~~~~e~~~~~W~~~~el~~~~~~~~~-~~~l~~~~~~l~~~ 181 (196)
...+|..+++|++++++..+.....+ +.+++.++..++++
T Consensus 227 ~~~~E~~~~~W~~~~el~~l~~~~si~~~li~~~l~~~r~~ 267 (269)
T 1vk6_A 227 IDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAE 267 (269)
T ss_dssp CCTTTEEEEEEEETTSCCSCCCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCcceEEEEEEEHHHhhhcccCcHHHHHHHHHHHHHHHhh
Confidence 33467899999999999887655443 67777777776643
No 52
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.78 E-value=6.3e-19 Score=136.36 Aligned_cols=115 Identities=17% Similarity=0.059 Sum_probs=81.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC----CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELL 112 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~----~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l 112 (196)
..+.+|++++++.+ +++||+++.+ .+.|.||||++++||++.+||+||++||||+.+..... +
T Consensus 39 ~~~~~v~v~i~~~~------------~~vLL~~r~~~~~~~~~w~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~-l 105 (182)
T 2yvp_A 39 GPVAASFVLPVTER------------GTALLVRQYRHPTGKFLLEVPAGKVDEGETPEAAARRELREEVGAEAETLIP-L 105 (182)
T ss_dssp SSCEEEEEEEBCTT------------SEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCEECSCEEE-C
T ss_pred ecCCEEEEEEEcCC------------CEEEEEEeccCCCCCcEEEeccccCCCCcCHHHHHHHHHHHHhCCCcccEEE-E
Confidence 44457777777642 2799998764 36799999999999999999999999999999876665 5
Q ss_pred eeEEeeeCCCCceEEEEEEEEeecc--ccccCCcCccceeEEEeHHHHHhhccchh
Q 029277 113 GEWNFKSRAHNTDYQGYMFPLLVQD--QLAEWPEKNVRSRKWMSVAEARKVCQHWW 166 (196)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~~~~--~~~~~~~~e~~~~~W~~~~el~~~~~~~~ 166 (196)
+.+.. .. .......++|.+.... ........|..++.|++++++.+++..+.
T Consensus 106 ~~~~~-~~-~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~ 159 (182)
T 2yvp_A 106 PSFHP-QP-SFTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKGE 159 (182)
T ss_dssp CCBCS-CT-TTBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTTC
T ss_pred EEEeC-CC-CccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 55422 11 2223345566665322 22223456789999999999998875553
No 53
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.78 E-value=1.7e-18 Score=146.84 Aligned_cols=129 Identities=16% Similarity=0.133 Sum_probs=92.6
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC---CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce---
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE--- 110 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~---~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~--- 110 (196)
..+.+|++++++.+ +|||+++.+. |.|.||||++|+|||+++||+||++||||+.+.....
T Consensus 206 ~~~~~v~~vv~~~~-------------~vLL~~r~~~~~~g~w~lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~ 272 (352)
T 2qjt_B 206 PNFVTVDALVIVND-------------HILMVQRKAHPGKDLWALPGGFLECDETIAQAIIRELFEETNINLTHEQLAIA 272 (352)
T ss_dssp CEEEEEEEEEEETT-------------EEEEEEESSSSSTTCEECSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred CCceEEEEEEEECC-------------EEEEEEEcCCCCCCeEECCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcce
Confidence 34567777777431 7999998763 7899999999999999999999999999999875432
Q ss_pred eeeeEEeeeCCC--CceEEEEEEEEeecccc--cc-CCcCccceeEEEeH-HHHHhh--ccchhHHHHHHHHHHHH
Q 029277 111 LLGEWNFKSRAH--NTDYQGYMFPLLVQDQL--AE-WPEKNVRSRKWMSV-AEARKV--CQHWWMKEALDRLVMRL 178 (196)
Q Consensus 111 ~l~~~~~~~~~~--~~~~~~~~f~~~~~~~~--~~-~~~~e~~~~~W~~~-~el~~~--~~~~~~~~~l~~~~~~l 178 (196)
......+..+.. ......+.|.+...... .. .+.+|..+++|+++ +++.++ ...+.++.+++.+++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~~~~~~~~~il~~~~~~l 348 (352)
T 2qjt_B 273 KRCEKVFDYPDRSVRGRTISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICDRMLEDHYQIITILLEEC 348 (352)
T ss_dssp EEEEEEECCTTSCTTSEEEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTTSBSTTHHHHHHHHHHHT
T ss_pred eeeeEEecCCCCCCCccEEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhhhhChhHHHHHHHHHHHh
Confidence 012222333322 22344556666554332 21 23567899999999 999986 66788899999998877
No 54
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.77 E-value=9.9e-19 Score=136.64 Aligned_cols=114 Identities=18% Similarity=0.117 Sum_probs=82.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-----CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeeccee
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECEL 111 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-----~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~ 111 (196)
..+.++++++++.+ ++.+|||++|.+ .|.|.||||+++.||++.+||+||++||||+.+.....
T Consensus 32 ~~~~~~~~v~i~~~----------~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~- 100 (194)
T 1nqz_A 32 HYRRAAVLVALTRE----------ADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTL- 100 (194)
T ss_dssp -CEEEEEEEEEESS----------SSCBBCEEEEC------CCCEECSEEECCTTCCHHHHHHHHHHHHHCCCGGGCEE-
T ss_pred CCceEEEEEEEecC----------CCeEEEEEEecCCCCCCCCeEECCcccCCCCCCHHHHHHHHHHHHHCCCccceEE-
Confidence 45677777777532 334799999864 37899999999999999999999999999999887666
Q ss_pred eeeEEeeeCCCCceEEEEEEEEeecccc--ccCCcCccceeEEEeHHHH-Hhhcc
Q 029277 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQL--AEWPEKNVRSRKWMSVAEA-RKVCQ 163 (196)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~--~~~~~~e~~~~~W~~~~el-~~~~~ 163 (196)
++.+.+..... ....++|.+...... .....+|+.++.|++++++ .+...
T Consensus 101 l~~~~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 153 (194)
T 1nqz_A 101 LGELDDVFTPV--GFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPLV 153 (194)
T ss_dssp EEECCCEEETT--TEEEEEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCCE
T ss_pred EEEccCccCCC--CeEEEEEEEEecCCccccCCCccceeEEEEEEHHHhccCCCc
Confidence 66654433322 244566776665322 2334567899999999999 76543
No 55
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.77 E-value=2e-18 Score=132.05 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=84.1
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-----CCCEE-ecCcccCCCCCHHHHHHHHHHHhhceeeeecce-e
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGML-FPKGGWEIDESIQEAALRETIEEAGVTGIVECE-L 111 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-----~~~W~-lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~-~ 111 (196)
+.++++++++.+ +++||++|.. .|.|. ||||++++||++.+||+||++||||+.+..... +
T Consensus 34 ~~~v~v~i~~~~------------~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~l~~ 101 (171)
T 1q27_A 34 VRVVNAFLRNSQ------------GQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYEEAFRREAREELNVEIDALSWRP 101 (171)
T ss_dssp CEEEEEEEEETT------------TEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHHHHHHHHHHHHHSCTTSSSCEEE
T ss_pred ceEEEEEEECCC------------CeEEEEEecCCCCCCCCccccccCccccCCCCHHHHHHHHHHHHHCCcccccceEE
Confidence 556777777643 2799988744 37798 999999999999999999999999999876432 1
Q ss_pred eeeEE-eeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhcc--chhHHHHHHHHHHHHh
Q 029277 112 LGEWN-FKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQ--HWWMKEALDRLVMRLT 179 (196)
Q Consensus 112 l~~~~-~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~--~~~~~~~l~~~~~~l~ 179 (196)
++.+. +... ... ..++|.+.. .........|..+++|++++++.++.. ......++..+...+.
T Consensus 102 ~~~~~~~~~~--~~~-~~~~f~~~~-~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~~~~~~~~~l~~~~~ 168 (171)
T 1q27_A 102 LASFSPFQTT--LSS-FMCVYELRS-DATPIFNPNDISGGEWLTPEHLLARIAAGEAAKGDLAELVRRCYR 168 (171)
T ss_dssp EEEECSSSSC--CSS-EEEEEEEEC-CCCCCSCTTTCSCCEEECHHHHHHHHHHHSSCCHHHHHHHHHHHT
T ss_pred EEEEeccCCC--Ccc-EEEEEEEEE-CCccccCchhhheEEEecHHHHHHHHhcCCCCchhHHHHHHHHHh
Confidence 44433 2222 122 556777665 222222346778999999999986532 2234555655555443
No 56
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.77 E-value=1.3e-19 Score=131.79 Aligned_cols=106 Identities=17% Similarity=0.210 Sum_probs=80.4
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeecccc
Q 029277 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (196)
Q Consensus 64 ~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (196)
+|||++|.+. |.|.||||++++||++.+||.||++||||+.+..... ++.+.+..+ ......++|.+......
T Consensus 17 ~vLl~~r~~~~~~~g~w~~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~ 93 (129)
T 1mut_A 17 EIFITRRAADAHMANKLEFPGGKIEMGETPEQAVVRELQEEVGITPQHFSL-FEKLEYEFP--DRHITLWFWLVERWEGE 93 (129)
T ss_dssp EEEEEECSSCCSSSCCEECCCCCSSSCSSTTHHHHHHHHTTTCCSSCEECC-CCCCBCCCS--SCEEECCCEEEEECSSC
T ss_pred EEEEEEeCCCCCCCCeEECCccCcCCCCCHHHHHHHHHHHHhCCccccceE-EEEEEEecC--CceEEEEEEEEEccCCc
Confidence 8999998764 7899999999999999999999999999999877666 665544333 22334456666654332
Q ss_pred ccCCcCccceeEEEeHHHHHhhccchhHHHHHHHH
Q 029277 140 AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRL 174 (196)
Q Consensus 140 ~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~ 174 (196)
. ...|..++.|++++++.++...+.++.+++.+
T Consensus 94 ~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~l 126 (129)
T 1mut_A 94 P--WGKEGQPGEWMSLVGLNADDFPPANEPVIAKL 126 (129)
T ss_dssp C--CCCSSCCCEEEESSSCCTTTSCTTCHHHHHHH
T ss_pred c--CCcccceeEEeCHHHcccccCCchhHHHHHHH
Confidence 2 23467889999999999988777777777654
No 57
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.77 E-value=2.4e-18 Score=136.95 Aligned_cols=111 Identities=17% Similarity=0.021 Sum_probs=79.0
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC-------CCEEe-cCcccCCCCC--H----HHHHHHHHHHhhc
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-------KGMLF-PKGGWEIDES--I----QEAALRETIEEAG 102 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~-------~~W~l-PgG~ve~gEs--~----~~Aa~REl~EEtG 102 (196)
.++..+..+++..+ ++|||++|.++ +.|.+ |||++|+||| + ++||+||++||||
T Consensus 65 ~~~q~i~~~II~~~------------grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~EEtG 132 (211)
T 3e57_A 65 TTKQVIPYVVIMDG------------DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNEEVD 132 (211)
T ss_dssp TEEEEEEEEEEEET------------TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHHHEE
T ss_pred cccceEEEEEEEEC------------CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHHHhC
Confidence 66776666666543 28999998643 47999 9999999999 4 9999999999999
Q ss_pred eeeeecceeeeeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhc
Q 029277 103 VTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVC 162 (196)
Q Consensus 103 l~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~ 162 (196)
+.+..... ++.+.+........+..++|.+...... ..+.+..+++|++++++.++.
T Consensus 133 l~v~~~~~-ig~~~~~~~~~~~~~l~~~f~~~~~~g~--~~~~E~~~~~W~~~~eL~~~~ 189 (211)
T 3e57_A 133 VSLRELEF-LGLINSSTTEVSRVHLGALFLGRGKFFS--VKEKDLFEWELIKLEELEKFS 189 (211)
T ss_dssp EEEEEEEE-EEEEECCSSHHHHTEEEEEEEEEEEEEE--ESCTTTCEEEEEEHHHHHHHG
T ss_pred CeeeccEE-EEEEeccCCCCCeEEEEEEEEEEeCCce--eCCCCeEEEEEEEHHHHHHhH
Confidence 99888777 7777653221122344556777655332 234567899999999999883
No 58
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.76 E-value=3.9e-18 Score=130.57 Aligned_cols=113 Identities=24% Similarity=0.158 Sum_probs=76.4
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC----CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK----GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~----~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
.+.+|++++++ + + ++||+++.+ .+.|.||||++|+|||+.+||+||++||||+ +..... ++
T Consensus 33 ~~~~v~vii~~-~----------~--~vLL~~~~r~~~~~~~w~lPgG~ve~gEs~~~aa~REl~EEtGl-~~~~~~-l~ 97 (170)
T 1v8y_A 33 HKPAVAVIALR-E----------G--RMLFVRQMRPAVGLAPLEIPAGLIEPGEDPLEAARRELAEQTGL-SGDLTY-LF 97 (170)
T ss_dssp ECCEEEEEEEE-T----------T--EEEEEECCBTTTTBCCBBCSEEECCTTCCHHHHHHHHHHHHHSE-EEEEEE-EE
T ss_pred cCCeEEEEEEE-C----------C--EEEEEEEEeCCCCCCEEECCccccCCCCCHHHHHHHHHHHHHCC-CcCcee-eE
Confidence 34577788887 3 1 799998754 2679999999999999999999999999999 777666 66
Q ss_pred eEEeeeCCCCceEEEEEEEEeeccc-cccCCcCccceeEEEeHHHHHhhccchhH
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQ-LAEWPEKNVRSRKWMSVAEARKVCQHWWM 167 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~~~~~ 167 (196)
.+.. .. .......++|.+..... .....++|..+++|++++++.+++..+.+
T Consensus 98 ~~~~-~~-~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~~~ 150 (170)
T 1v8y_A 98 SYFV-SP-GFTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRGEV 150 (170)
T ss_dssp EEES-CT-TTBCCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHTTSC
T ss_pred EEec-CC-CccccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCCCE
Confidence 5432 22 22233455666654332 22223457799999999999988654433
No 59
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.76 E-value=2e-18 Score=138.31 Aligned_cols=128 Identities=14% Similarity=0.051 Sum_probs=79.4
Q ss_pred cccccccccCCCceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC---------------------------------
Q 029277 26 RTGRHLQRYQKGRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK--------------------------------- 72 (196)
Q Consensus 26 ~~g~~~~~~~~~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~--------------------------------- 72 (196)
..|....+.....+.+|++|+++.. +.++||+++.+
T Consensus 23 ~~G~~~~~e~v~~~~aV~vl~~~~~-----------~~~vlLvrQ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (218)
T 3q91_A 23 MNGAQKSWDFMKTHDSVTVLLFNSS-----------RRSLVLVKQFRPAVYAGEVERRFPGSLAAVDQDGPRELQPALPG 91 (218)
T ss_dssp ------------CCCEEEEEEEEGG-----------GTEEEEEEEECHHHHHHHTC------------------------
T ss_pred CCCCEEEEEEEEcCCeEEEEEEECC-----------CCEEEEEEcccccccccccccccccccccccccccccccccccc
Confidence 3344444333344567888888853 23799998643
Q ss_pred --CCCEEecCcccCC-CCCHHHHHHHHHHHhhceee--eecceeeeeEEeeeCCCCceEEEEEEEEeeccc------ccc
Q 029277 73 --GKGMLFPKGGWEI-DESIQEAALRETIEEAGVTG--IVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQ------LAE 141 (196)
Q Consensus 73 --~~~W~lPgG~ve~-gEs~~~Aa~REl~EEtGl~~--~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~------~~~ 141 (196)
.+.|+||||++|+ ||++++||+||++||||+.+ ..... ++.+.. .........++|.+..... ...
T Consensus 92 ~~~~~welPgG~ve~~gEs~~eaA~REl~EEtGl~~~~~~l~~-l~~~~~--~~g~~~~~~~~f~a~~~~~~~~~~~~~~ 168 (218)
T 3q91_A 92 SAGVTVELCAGLVDQPGLSLEEVACKEAWEECGYHLAPSDLRR-VATYWS--GVGLTGSRQTMFYTEVTDAQRSGPGGGL 168 (218)
T ss_dssp -CCEEEECEEEECCSSSCCHHHHHHHHHHHHHCBCCCGGGCEE-EEEEEE--C---CCEEEEEEEEEECGGGBCC-----
T ss_pred CCCeEEECCcceeCCCCCCHHHHHHHHHHHHhCCccccCceEE-EEEEec--CCCccceEEEEEEEEECCcccccCCCCC
Confidence 3479999999999 99999999999999999998 44444 554322 2222234566777765431 112
Q ss_pred CCcCccceeEEEeHHHHHhhccchhH
Q 029277 142 WPEKNVRSRKWMSVAEARKVCQHWWM 167 (196)
Q Consensus 142 ~~~~e~~~~~W~~~~el~~~~~~~~~ 167 (196)
..++|..++.|++++++.+++..+.+
T Consensus 169 ~d~~E~~ev~wv~l~el~~~i~~g~i 194 (218)
T 3q91_A 169 VEEGELIEVVHLPLEGAQAFADDPDI 194 (218)
T ss_dssp ----CCEEEEEEEGGGHHHHHHCTTS
T ss_pred CCCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 23467899999999999999766544
No 60
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.76 E-value=1.2e-17 Score=125.87 Aligned_cols=125 Identities=18% Similarity=0.205 Sum_probs=87.6
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC----CCEEecCcccCCCCCHH-HHHHHHHHHhhc-eeeeeccee
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQ-EAALRETIEEAG-VTGIVECEL 111 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~----~~W~lPgG~ve~gEs~~-~Aa~REl~EEtG-l~~~~~~~~ 111 (196)
.|..+.+|+++.. + .+++|||++|... |.|+||||+++.||++. +||+||+.|||| +.+.....
T Consensus 18 ~~~~~~~vi~~~~---~------~~~~vLl~~R~~~~~~~g~w~~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~~~~- 87 (155)
T 1x51_A 18 EESSATCVLEQPG---A------LGAQILLVQRPNSGLLAGLWEFPSVTWEPSEQLQRKALLQELQRWAGPLPATHLRH- 87 (155)
T ss_dssp EEEEEEEEEEEEC---S------SSEEEEEEECCCCSTTCSCEECCEEECCSSHHHHHHHHHHHHHHHSCCCCSTTCEE-
T ss_pred eEEEEEEEEEecC---C------CCCEEEEEECCCCCCCCceecCCccccCCCCCHHHHHHHHHHHHHhCCcceeeeee-
Confidence 4556666666642 0 1348999988654 68999999999999996 999999999999 87655444
Q ss_pred eeeEEeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHH
Q 029277 112 LGEWNFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVM 176 (196)
Q Consensus 112 l~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 176 (196)
++.+.+.++ ......++|.+....... ...+..++.|++++++.++.....++.++..+..
T Consensus 88 l~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~ 148 (155)
T 1x51_A 88 LGEVVHTFS--HIKLTYQVYGLALEGQTP--VTTVPPGARWLTQEEFHTAAVSTAMKKVFRVYQG 148 (155)
T ss_dssp CCCBCCBCS--SCEEEEEEEEEECSSCCC--CCCCCTTEEEEEHHHHHHSCCCHHHHHHHHHHHH
T ss_pred cceEEEecC--CccEEEEEEEEEEcCCCC--CCCCCCccEEccHHHhhhcCCCHHHHHHHHHHHh
Confidence 554443333 223445567766543321 2235678999999999998877777887776654
No 61
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.76 E-value=6.6e-18 Score=133.06 Aligned_cols=101 Identities=18% Similarity=0.026 Sum_probs=73.7
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeecccc
Q 029277 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (196)
Q Consensus 64 ~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (196)
+|||+++.+. +.|+||||++|+||++++||+||++||||+.+..... ++.+... +. ......++|.+......
T Consensus 61 ~vLLvrq~r~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~-l~~~~~~-~~-~~~~~~~~f~a~~~~~~ 137 (198)
T 1vhz_A 61 HLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGFGANDLTF-LKKLSMA-PS-YFSSKMNIVVAQDLYPE 137 (198)
T ss_dssp EEEEEEEEETTTTEEEEECEEEECCTTCCHHHHHHHHHHHHHSEEEEEEEE-EEEEECC-TT-TCCCEEEEEEEEEEEEC
T ss_pred EEEEEEcccCCCCCcEEEeCcccCCCCcCHHHHHHHHHHHHHCCCcCceEE-EEEEeCC-CC-ccCcEEEEEEEEeCCcc
Confidence 7999987543 3699999999999999999999999999999987776 6665432 21 22234456666543222
Q ss_pred -ccCCcCccceeEEEeHHHHHhhccchhH
Q 029277 140 -AEWPEKNVRSRKWMSVAEARKVCQHWWM 167 (196)
Q Consensus 140 -~~~~~~e~~~~~W~~~~el~~~~~~~~~ 167 (196)
....+.|..++.|++++++.+++..+.+
T Consensus 138 ~~~~~~~E~~~~~w~~~~el~~~~~~~~i 166 (198)
T 1vhz_A 138 SLEGDEPEPLPQVRWPLAHMMDLLEDPDF 166 (198)
T ss_dssp CCCCCCSSCCCEEEEEGGGGGGGGGCTTT
T ss_pred cCCCCCCceEEEEEEEHHHHHHHHHcCCC
Confidence 2223456789999999999999876643
No 62
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.75 E-value=6.9e-18 Score=133.64 Aligned_cols=113 Identities=15% Similarity=0.084 Sum_probs=75.8
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC----CCEEecCcccC-CCCCHHHHHHHHHHHhhceeeeecceeee
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWE-IDESIQEAALRETIEEAGVTGIVECELLG 113 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~----~~W~lPgG~ve-~gEs~~~Aa~REl~EEtGl~~~~~~~~l~ 113 (196)
+.+|++++++.+ ++|||+++.+. +.|.||||+++ .||++.+||+||++||||+.+..... ++
T Consensus 43 ~~av~v~i~~~~------------~~vLLvrr~r~~~~~~~w~lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~~~~-l~ 109 (207)
T 1mk1_A 43 FGAVAIVAMDDN------------GNIPMVYQYRHTYGRRLWELPAGLLDVAGEPPHLTAARELREEVGLQASTWQV-LV 109 (207)
T ss_dssp CCEEEEEECCTT------------SEEEEEEEEETTTTEEEEECCEEECCSTTCCHHHHHHHHHHHHHCEEEEEEEE-EE
T ss_pred CCEEEEEEEcCC------------CEEEEEEeecCCCCCcEEEeCCccccCCCCCHHHHHHHHHHHHHCCcccccEE-EE
Confidence 346666666632 37999987643 57999999999 99999999999999999999987766 66
Q ss_pred eEEeeeCCCCceEEEEEEEEeecccccc---CCcCccceeEEEeHHHHHhhccchh
Q 029277 114 EWNFKSRAHNTDYQGYMFPLLVQDQLAE---WPEKNVRSRKWMSVAEARKVCQHWW 166 (196)
Q Consensus 114 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~~~~e~~~~~W~~~~el~~~~~~~~ 166 (196)
.+ +..+. ......++|.+........ ..+.|+.++.|++++++.+++..+.
T Consensus 110 ~~-~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~~ 163 (207)
T 1mk1_A 110 DL-DTAPG-FSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRGE 163 (207)
T ss_dssp EE-CSCTT-TBCCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHTTS
T ss_pred EE-EcCCC-ccccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcCC
Confidence 54 33322 2222345666554332221 2345678999999999999876553
No 63
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.75 E-value=4e-18 Score=133.48 Aligned_cols=114 Identities=16% Similarity=0.032 Sum_probs=78.3
Q ss_pred eEEEEEEEEEeeccCCcccccCCceEEEEEEEcC----------CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeec
Q 029277 39 RQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK----------GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVE 108 (196)
Q Consensus 39 r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~----------~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~ 108 (196)
+.+|++++++.+ ++++||+++.+ .+.|+||||++| ||++.+||+||++||||+.+...
T Consensus 45 ~~av~v~~~~~~-----------~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~~~~aa~REl~EEtG~~~~~~ 112 (191)
T 3o6z_A 45 GNGATILLYNTK-----------KKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDEPEVCIRKEAIEETGYEVGEV 112 (191)
T ss_dssp CCEEEEEEEETT-----------TTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSCHHHHHHHHHHHHC-CCCSCE
T ss_pred CCEEEEEEEECC-----------CCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCCHHHHHHHHHHHHhCCccCcE
Confidence 346777777642 23899998763 357999999999 99999999999999999998766
Q ss_pred ceeeeeEEeeeCCCCceEEEEEEEEeeccccc----cCCcCccceeEEEeHHHHHhhccchhH
Q 029277 109 CELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA----EWPEKNVRSRKWMSVAEARKVCQHWWM 167 (196)
Q Consensus 109 ~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~----~~~~~e~~~~~W~~~~el~~~~~~~~~ 167 (196)
.. ++.+. ..+ .......++|.+....... ...++|..++.|++++++.+++..+.+
T Consensus 113 ~~-l~~~~-~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g~i 172 (191)
T 3o6z_A 113 RK-LFELY-MSP-GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTGEI 172 (191)
T ss_dssp EE-EEEEE-SCT-TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHSSC
T ss_pred EE-EEEEE-eCC-CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcCCC
Confidence 65 66542 222 2223445667666543211 112567899999999999998765533
No 64
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=99.74 E-value=1.5e-17 Score=138.65 Aligned_cols=140 Identities=15% Similarity=0.056 Sum_probs=93.2
Q ss_pred CceEEEEEEEEEeeccCCcccccC-----CceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhceee------
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINE-----EDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAGVTG------ 105 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~-----~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~------ 105 (196)
+++.++.+||.+.+...+|.++-+ ...+|||+++...|.|.||||++++||++.+||+||++||||+.+
T Consensus 108 gp~~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~~g~W~lPGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~ 187 (292)
T 1q33_A 108 GPNHAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKDCGEWAIPGGMVDPGEKISATLKREFGEEALNSLQKTSAE 187 (292)
T ss_dssp EEEEEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTTTCSEECCCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSH
T ss_pred CccccceeeeeeecccccCceeeeccCCCCceEEEEEEecCCCcEeCCCcccCCCCCHHHHHHHHHHHHhCCcccccccc
Confidence 567788888887642223322221 235899999988899999999999999999999999999999983
Q ss_pred ------eecceee---ee--EEeeeCCC----CceEEEEEEEEeeccc-----cccCCcCccceeEEEeHHHHHhhccch
Q 029277 106 ------IVECELL---GE--WNFKSRAH----NTDYQGYMFPLLVQDQ-----LAEWPEKNVRSRKWMSVAEARKVCQHW 165 (196)
Q Consensus 106 ------~~~~~~l---~~--~~~~~~~~----~~~~~~~~f~~~~~~~-----~~~~~~~e~~~~~W~~~~el~~~~~~~ 165 (196)
....+ + +. |.....+. .......+|.+..... ....+.+|+.+++|++++++..+ ..
T Consensus 188 ~~~l~~~l~~l-~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~~~~E~~~~~W~~~del~~L--~~ 264 (292)
T 1q33_A 188 KREIEEKLHKL-FSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLEAGDDAGKVKWVDINDKLKL--YA 264 (292)
T ss_dssp HHHHHHHHHHH-TTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCCCCTTCSEEEEEECCTTCCC--ST
T ss_pred chhhHHHHHHH-hhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccccccccCCCCccceEEEEEcccCccc--CH
Confidence 12222 2 22 22111111 1134445555544321 12234567899999999999875 45
Q ss_pred hHHHHHHHHHHHHh
Q 029277 166 WMKEALDRLVMRLT 179 (196)
Q Consensus 166 ~~~~~l~~~~~~l~ 179 (196)
.++++|..+++++.
T Consensus 265 ~h~~il~~~~~~~~ 278 (292)
T 1q33_A 265 SHSQFIKLVAEKRD 278 (292)
T ss_dssp THHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhc
Confidence 77889988887764
No 65
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.74 E-value=5.4e-18 Score=134.64 Aligned_cols=113 Identities=19% Similarity=0.091 Sum_probs=77.8
Q ss_pred EEEEEEEEEeeccCCcccccCCceEEEEEEEcCC---------CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecce
Q 029277 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG---------KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECE 110 (196)
Q Consensus 40 ~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~---------~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~ 110 (196)
.+|++++++.+ +++|||+++.+. +.|+||||++|+||++++||+||++||||+.+.....
T Consensus 58 ~av~vl~~~~~-----------~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~~~~aA~REl~EEtGl~~~~~~~ 126 (209)
T 1g0s_A 58 HAAVLLPFDPV-----------RDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGESVEDVARREAIEEAGLIVKRTKP 126 (209)
T ss_dssp CEEEEEEEETT-----------TTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCCHHHHHHHHHHHHHCCCCCCEEE
T ss_pred CEEEEEEEECC-----------CCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcCHHHHHHHHHHHHcCcccCcEEE
Confidence 46777777742 237999976442 3599999999999999999999999999999876666
Q ss_pred eeeeEEeeeCCCCceEEEEEEEEeeccc--cc---cCCcCccceeEEEeHHHHHhhccchh
Q 029277 111 LLGEWNFKSRAHNTDYQGYMFPLLVQDQ--LA---EWPEKNVRSRKWMSVAEARKVCQHWW 166 (196)
Q Consensus 111 ~l~~~~~~~~~~~~~~~~~~f~~~~~~~--~~---~~~~~e~~~~~W~~~~el~~~~~~~~ 166 (196)
++.+ +..+. ......++|.+..... .. ...++|..++.|++++++.+++..+.
T Consensus 127 -l~~~-~~~~g-~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g~ 184 (209)
T 1g0s_A 127 -VLSF-LASPG-GTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEGK 184 (209)
T ss_dssp -EEEE-ESCTT-TBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTTS
T ss_pred -eEEE-ecCCC-ccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcCC
Confidence 6654 32222 2223456676664321 11 12345678999999999999876553
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.72 E-value=3.7e-17 Score=129.88 Aligned_cols=113 Identities=14% Similarity=0.094 Sum_probs=76.0
Q ss_pred EEEEEEEEEeeccCCcccccCCceEEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeE
Q 029277 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEW 115 (196)
Q Consensus 40 ~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~ 115 (196)
.+|+++++..+.. ++.++||+++.+. +.|+||||++|+||++++||+||++||||+.+..... ++.+
T Consensus 62 ~av~v~~v~~~~~--------~~~~vlLv~q~R~~~~~~~welPgG~ve~gEs~~~aA~REl~EEtGl~~~~~~~-l~~~ 132 (212)
T 2dsc_A 62 DGVAVIPVLQRTL--------HYECIVLVKQFRPPMGGYCIEFPAGLIDDGETPEAAALRELEEETGYKGDIAEC-SPAV 132 (212)
T ss_dssp SEEEEEEEEECTT--------SCCEEEEEEEEEGGGTEEEEECCEEECCTTCCHHHHHHHHHHHHHCCCCEEEEE-CCCE
T ss_pred CEEEEEEEEeCCC--------CCcEEEEEEeecCCCCCcEEECCccccCCCCCHHHHHHHHHHHHhCCCccceEE-eccE
Confidence 3566666554310 2358999986432 4699999999999999999999999999999877665 5544
Q ss_pred EeeeCCCCceEEEEEEEEeecc--c-----cccCCcCccceeEEEeHHHHHhhcc
Q 029277 116 NFKSRAHNTDYQGYMFPLLVQD--Q-----LAEWPEKNVRSRKWMSVAEARKVCQ 163 (196)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~--~-----~~~~~~~e~~~~~W~~~~el~~~~~ 163 (196)
+..+.. .....++|.+.+.. . .....++|..++.|++++++.+++.
T Consensus 133 -~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 133 -CMDPGL-SNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp -ESCTTT-BCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred -EcCCCc-cCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 222221 12234455554322 1 1122345779999999999998876
No 67
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.71 E-value=7.4e-18 Score=139.04 Aligned_cols=110 Identities=19% Similarity=0.227 Sum_probs=72.8
Q ss_pred EEEEEEEEEeeccCCcccccCCceEEEEEEEcC-CCCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEee
Q 029277 40 QVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-GKGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFK 118 (196)
Q Consensus 40 ~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-~~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~ 118 (196)
.++++|+++.+ .++|||+++.+ .+.|.+|||++|+||++++||+||++||||+.+..... +..+...
T Consensus 102 ~~v~avv~~~~-----------~~~vLLv~r~~~~g~W~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~-~~~~~~~ 169 (271)
T 2a6t_A 102 PVRGAIMLDMS-----------MQQCVLVKGWKASSGWGFPKGKIDKDESDVDCAIREVYEETGFDCSSRIN-PNEFIDM 169 (271)
T ss_dssp CEEEEEEBCSS-----------SSEEEEEEESSTTCCCBCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCC-TTCEEEE
T ss_pred CeEEEEEEECC-----------CCEEEEEEEeCCCCeEECCcccCCCCcCHHHHHHHHHHHHhCCCceeeee-eeeeccC
Confidence 46788888752 23899999865 47899999999999999999999999999999876433 3322211
Q ss_pred eCCCCceEEEEEEEEeecccc---ccCCcCccceeEEEeHHHHHhhccc
Q 029277 119 SRAHNTDYQGYMFPLLVQDQL---AEWPEKNVRSRKWMSVAEARKVCQH 164 (196)
Q Consensus 119 ~~~~~~~~~~~~f~~~~~~~~---~~~~~~e~~~~~W~~~~el~~~~~~ 164 (196)
. ... ...++|.+...... ....++|+.+++|++++++.++...
T Consensus 170 ~--~~~-~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 170 T--IRG-QNVRLYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp E--ETT-EEEEEEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred C--cCC-ceEEEEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 1 111 23445555443211 1123467899999999999877544
No 68
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.67 E-value=5.7e-16 Score=132.86 Aligned_cols=108 Identities=10% Similarity=-0.025 Sum_probs=86.5
Q ss_pred EEEEEEEcCC----CCEEecCcccCCCCCHHHHHHHHHHHhhceeeeecceeeeeEEeeeCCCCceEEEEEEEEeecccc
Q 029277 64 EVLVISSQKG----KGMLFPKGGWEIDESIQEAALRETIEEAGVTGIVECELLGEWNFKSRAHNTDYQGYMFPLLVQDQL 139 (196)
Q Consensus 64 ~vLLv~~~~~----~~W~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~ 139 (196)
+|||++|..+ |.|+||||++|.| ++++|+.||+.||||+.+..... ++.+.+.++. .....++|.+.....
T Consensus 253 ~vLL~rR~~~g~~~GlWefPGG~ve~g-t~~~al~REl~EE~Gl~v~~~~~-l~~~~h~~~h--~~~~~~~~~~~~~~~- 327 (369)
T 3fsp_A 253 RVLIRKRDSTGLLANLWEFPSCETDGA-DGKEKLEQMVGEQYGLQVELTEP-IVSFEHAFSH--LVWQLTVFPGRLVHG- 327 (369)
T ss_dssp EEEEEECCSSSTTTTCEECCEEECSSS-CTHHHHHHHHTTSSSCCEEECCC-CCEEEEECSS--EEEEEEEEEEEECCS-
T ss_pred EEEEEECCCCCCcCCcccCCCcccCCC-CcHHHHHHHHHHHhCCceeeecc-cccEEEEcce--EEEEEEEEEEEEcCC-
Confidence 8999998754 7899999999999 99999999999999999988776 7777665542 334556677665442
Q ss_pred ccCCcCccceeEEEeHHHHHhhccchhHHHHHHHHHHHHhc
Q 029277 140 AEWPEKNVRSRKWMSVAEARKVCQHWWMKEALDRLVMRLTS 180 (196)
Q Consensus 140 ~~~~~~e~~~~~W~~~~el~~~~~~~~~~~~l~~~~~~l~~ 180 (196)
..|..++.|++++++.++...+.++.+++.+.+.+..
T Consensus 328 ----~~e~~~~~Wv~~~el~~~~l~~~~~~il~~l~~~~~~ 364 (369)
T 3fsp_A 328 ----GPVEEPYRLAPEDELKAYAFPVSHQRVWREYKEWASG 364 (369)
T ss_dssp ----SCCCTTEEEEEGGGGGGSCCCHHHHHHHHHHHHHTC-
T ss_pred ----CCCccccEEeeHHHhhhCCCCHHHHHHHHHHHHHhcC
Confidence 2456889999999999988888889999888776543
No 69
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.67 E-value=1.4e-16 Score=126.82 Aligned_cols=117 Identities=13% Similarity=0.012 Sum_probs=80.5
Q ss_pred CceEEEEEEEEEeeccCCcc---cccCCceEEEEEEEcCCCCEEecCcccCCCC-CHHHHHHHHHHHhhceeeeecce--
Q 029277 37 GRRQVVGCIPYRYKCVKQSL---DINEEDLEVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGVTGIVECE-- 110 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~---~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gE-s~~~Aa~REl~EEtGl~~~~~~~-- 110 (196)
+.+.++.++++... .++ +++ .+.++||.++ ..|.|+||||++|+|| ++++||+||++||||+.+....+
T Consensus 31 ~~~~~~~~~l~~~~---~~vv~~i~~-~~~~vLl~~r-~~g~w~~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~ 105 (212)
T 1u20_A 31 GYKHACHALLHAPS---QAKLFDRVP-IRRVLLMMMR-FDGRLGFPGGFVDTRDISLEEGLKRELEEELGPALATVEVTE 105 (212)
T ss_dssp SCEEEEEEEEEEEC---CCEETTTEE-CCEEEEEEEE-TTSCEECSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCG
T ss_pred CCcccceEEEeCCC---ceEEEEEEe-cCCEEEEEEe-CCCeEECCCcccCCCCCCHHHHHHHHHHHHHCCCccccceee
Confidence 45677778887764 222 233 4568888877 4589999999999999 99999999999999999875431
Q ss_pred --eeeeEEeeeCCCCceEEEEEEEEeeccccc----------cCCcCccceeEEEeHHHHHhh
Q 029277 111 --LLGEWNFKSRAHNTDYQGYMFPLLVQDQLA----------EWPEKNVRSRKWMSVAEARKV 161 (196)
Q Consensus 111 --~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~----------~~~~~e~~~~~W~~~~el~~~ 161 (196)
+++.+.+.++ .....++|.+....... ...+.|..++.|++++++.+.
T Consensus 106 ~~~~~~~~~~~~---~~~~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~ 165 (212)
T 1u20_A 106 DDYRSSQVREHP---QKCVTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDR 165 (212)
T ss_dssp GGEEEEEEECTT---SCEEEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTS
T ss_pred eeEEEeccccCC---CcEEEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhh
Confidence 1444443322 34556677776543211 112346688999999998653
No 70
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.61 E-value=1.9e-14 Score=116.25 Aligned_cols=112 Identities=11% Similarity=0.092 Sum_probs=77.5
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC-----CCEEec-CcccCCC------CC---HHHHHHHHHHHhhc
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-----KGMLFP-KGGWEID------ES---IQEAALRETIEEAG 102 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~-----~~W~lP-gG~ve~g------Es---~~~Aa~REl~EEtG 102 (196)
.+.++++++++.+ +++||.+|... |.|.+| ||++++| |+ +.+||+||++||||
T Consensus 58 ~h~av~v~v~~~~------------g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~~~~~~Aa~REl~EElG 125 (235)
T 2dho_A 58 LHRAFSVFLFNTE------------NKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDALGVRRAAQRRLKAELG 125 (235)
T ss_dssp CEEEEEEEEECTT------------CCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred eEEEEEEEEEcCC------------CEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccchhHHHHHHHHHHHHHC
Confidence 4556777777642 27988887542 689999 5999999 88 49999999999999
Q ss_pred eeeee-----cceeeeeEEeeeCCCCc---eEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhcc
Q 029277 103 VTGIV-----ECELLGEWNFKSRAHNT---DYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQ 163 (196)
Q Consensus 103 l~~~~-----~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~ 163 (196)
+.+.. ... ++.+.|....... +...++|.+.... ......+|+.+++|++++++.+++.
T Consensus 126 i~~~~v~~~~l~~-l~~~~y~~~~~~~~~~~e~~~vf~~~~~~-~~~~~~~Ev~~~~wv~~~el~~~l~ 192 (235)
T 2dho_A 126 IPLEEVPPEEINY-LTRIHYKAQSDGIWGEHEIDYILLVRMNV-TLNPDPNEIKSYCYVSKEELKELLK 192 (235)
T ss_dssp CCGGGSCGGGSEE-EEEEEEEEECSSSBEEEEEEEEEEEECCC-CCCCCTTTEEEEEEECHHHHHHHHH
T ss_pred CCccccChhhcEE-EEEEEEeccCCCccceeEEEEEEEEEECC-CCcCChHHEEEEEEEcHHHHHHHHh
Confidence 98652 233 6666655543222 2344566666432 2222346789999999999988754
No 71
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.60 E-value=1.8e-14 Score=117.26 Aligned_cols=113 Identities=12% Similarity=0.084 Sum_probs=77.7
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcC-----CCCEEecC-cccCCC------CCH---HHHHHHHHHHhhc
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQK-----GKGMLFPK-GGWEID------ESI---QEAALRETIEEAG 102 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~-----~~~W~lPg-G~ve~g------Es~---~~Aa~REl~EEtG 102 (196)
.+.++++++++.+ +++||.+|.. +|.|.+|+ |++++| |++ .+||+||++||||
T Consensus 69 ~h~av~v~v~~~~------------g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~~~~~eAA~REl~EElG 136 (246)
T 2pny_A 69 LHRAFSVVLFNTK------------NRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELG 136 (246)
T ss_dssp CEEEEEEEEECTT------------CCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGGHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEEEEeCC------------CEEEEEEecCCCCCCCCceEeccCceeccCCcccccccchhHHHHHHHHHHHHHC
Confidence 4556667777642 2788888754 26899995 999999 887 9999999999999
Q ss_pred eeeee-----cceeeeeEEeeeCCCCc---eEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhhccc
Q 029277 103 VTGIV-----ECELLGEWNFKSRAHNT---DYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKVCQH 164 (196)
Q Consensus 103 l~~~~-----~~~~l~~~~~~~~~~~~---~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~ 164 (196)
+.+.. ... ++.+.|..+.... +...++|.+.... ......+|+.+++|++++++.+++..
T Consensus 137 i~~~~v~~~~l~~-l~~~~y~~~~~~~~~~~e~~~vf~~~~~~-~~~~~~~Ev~~~~wv~~eel~~~l~~ 204 (246)
T 2pny_A 137 IPGEQISPEDIVF-MTIYHHKAKSDRIWGEHEICYLLLVRKNV-TLNPDPSETKSILYLSQEELWELLER 204 (246)
T ss_dssp CCTTTCCGGGSEE-EEEEEEEEESSSSBEEEEEEEEEEEECCC-CCCCCTTTEEEEEEECHHHHHHHHHH
T ss_pred CCccccCccccEE-EEEEEEEecCCCceeeeEEEEEEEEEECC-CCCCChHHeeEEEEEeHHHHHHHHHh
Confidence 98652 233 6666655443222 2344566665432 22223468899999999999887543
No 72
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=3.3e-14 Score=114.65 Aligned_cols=116 Identities=22% Similarity=0.257 Sum_probs=81.2
Q ss_pred CceEEEEEEEEEeeccCCcccccCCc-eEEEEEEEcCC-----CCEEecCcccCCCCC--------------------HH
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEED-LEVLVISSQKG-----KGMLFPKGGWEIDES--------------------IQ 90 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~-~~vLLv~~~~~-----~~W~lPgG~ve~gEs--------------------~~ 90 (196)
.+|.++++|++++.. ++ .+|||++|... |.|.||||++|++|+ +.
T Consensus 6 ~~r~aA~lill~~~~---------~g~~~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~ 76 (232)
T 3qsj_A 6 DIRKAATLVVIRDGA---------NKDIEVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPVCAEDDDDPALA 76 (232)
T ss_dssp CEEEEEEEEEEEECG---------GGCEEEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHH
T ss_pred CCcceEEEEEEEcCC---------CCCeEEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhcccccccccchhhHHH
Confidence 578899999998751 22 58999998764 689999999999987 58
Q ss_pred HHHHHHHHHhhceeeeecce--------------------------------------eeeeE-EeeeCC-CCceEEEEE
Q 029277 91 EAALRETIEEAGVTGIVECE--------------------------------------LLGEW-NFKSRA-HNTDYQGYM 130 (196)
Q Consensus 91 ~Aa~REl~EEtGl~~~~~~~--------------------------------------~l~~~-~~~~~~-~~~~~~~~~ 130 (196)
.||+||++||||+.+..... .|..+ .+..+. ....+.+++
T Consensus 77 ~aAiRE~~EE~Gl~l~~~~~~~~~~~~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~F 156 (232)
T 3qsj_A 77 VTALRETAEEIGWLLAVRDGEGTKMDTPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRF 156 (232)
T ss_dssp HHHHHHHHHHHSCCCSEECTTCCBCCSCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEE
T ss_pred HHHHHHHHHHhCceeccccccCcccChhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEE
Confidence 99999999999998532110 01111 122222 234677888
Q ss_pred EEEeeccccc-cCCcCccceeEEEeHHHHHhh
Q 029277 131 FPLLVQDQLA-EWPEKNVRSRKWMSVAEARKV 161 (196)
Q Consensus 131 f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~ 161 (196)
|.+....... ....+|..++.|++++++.+.
T Consensus 157 Fla~lpq~~~v~~d~~E~~~~~W~~p~eal~~ 188 (232)
T 3qsj_A 157 FLCVGQHLGEPRLHGAELDAALWTPARDMLTR 188 (232)
T ss_dssp EEEECSSCCCCCCCSSSEEEEEEEEHHHHHHH
T ss_pred EEEECCCCCCCCCCCCceEEEEEEcHHHHHHH
Confidence 8887763221 334568899999999999643
No 73
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=99.58 E-value=7.7e-15 Score=123.60 Aligned_cols=118 Identities=14% Similarity=0.173 Sum_probs=91.1
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhh-ceeeeecceeeeeE
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEA-GVTGIVECELLGEW 115 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEt-Gl~~~~~~~~l~~~ 115 (196)
.++..|++|+.+.+ +|||+ .++| |.||||.+ +|+..++|+||++||| |+.++...+ +++|
T Consensus 181 ~p~~~vgaii~~~g-------------~vLL~--~~~G-W~LPG~~~--~~~~~~~a~RE~~EEttGl~v~~~~L-~~v~ 241 (321)
T 3rh7_A 181 EGEIRLGAVLEQQG-------------AVFLA--GNET-LSLPNCTV--EGGDPARTLAAYLEQLTGLNVTIGFL-YSVY 241 (321)
T ss_dssp HSCEEEEEEEESSS-------------CEEEB--CSSE-EBCCEEEE--SSSCHHHHHHHHHHHHHSSCEEEEEE-EEEE
T ss_pred CCcceEEEEEEECC-------------EEEEe--eCCC-ccCCcccC--CCChhHHHHHHHHHHhcCCEEeeceE-EEEE
Confidence 47889999999853 69999 5557 99998755 4444569999999997 999999888 7776
Q ss_pred EeeeCCCCceEEEEEEEEeeccccccCCcCccceeEEEeHHHHHhh-ccchhHHHHHHHHHHHHhccccC
Q 029277 116 NFKSRAHNTDYQGYMFPLLVQDQLAEWPEKNVRSRKWMSVAEARKV-CQHWWMKEALDRLVMRLTSQQLH 184 (196)
Q Consensus 116 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~e~~~~~W~~~~el~~~-~~~~~~~~~l~~~~~~l~~~~~~ 184 (196)
+... ......+|.+...++. ..+++||++++++.. +.++.++.+|+.+++..+.|.+.
T Consensus 242 ~~~~----~~~~~i~f~~~~~~g~-------~~e~~~f~~~elp~~~~~~~~~~~~L~~y~~e~~~g~f~ 300 (321)
T 3rh7_A 242 EDKS----DGRQNIVYHALASDGA-------PRQGRFLRPAELAAAKFSSSATADIINRFVLESSIGNFG 300 (321)
T ss_dssp ECTT----TCCEEEEEEEEECSSC-------CSSSEEECHHHHTTCEESSHHHHHHHHHHHHTTSCSSCC
T ss_pred EcCC----CceEEEEEEEEeCCCC-------eeeeEEECHHHCCCcccCCHHHHHHHHHHHHHhhcCCCC
Confidence 6322 2233457777765432 268999999999876 56799999999999888888765
No 74
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.52 E-value=1e-14 Score=116.61 Aligned_cols=93 Identities=13% Similarity=0.041 Sum_probs=63.0
Q ss_pred EEEEEEEcCCCCEEecCcccCCCC-CHHHHHHHHHHHhhceeeeec--ceeeeeEEeeeCCCCceEEEEEEEEeeccccc
Q 029277 64 EVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGVTGIVE--CELLGEWNFKSRAHNTDYQGYMFPLLVQDQLA 140 (196)
Q Consensus 64 ~vLLv~~~~~~~W~lPgG~ve~gE-s~~~Aa~REl~EEtGl~~~~~--~~~l~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 140 (196)
++||+.+. .+.|+||||++|+|| ++++||+||++||||+.+... .. +..+.. .+........++|.+.......
T Consensus 66 ~~ll~~r~-~g~w~lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~l~~-l~~~~~-~~~~~~~~~~~~f~~~l~~~~~ 142 (217)
T 2xsq_A 66 AILMQMRF-DGRLGFPGGFVDTQDRSLEDGLNRELREELGEAAAAFRVER-TDYRSS-HVGSGPRVVAHFYAKRLTLEEL 142 (217)
T ss_dssp EEEEEEET-TSCEECSEEECCTTCSSHHHHHHHHHHHHHCGGGGGCCCCG-GGEEEE-EECSSSSEEEEEEEEECCHHHH
T ss_pred cEEEEEcc-CCeEECCceecCCCCCCHHHHHHHHHHHHHCCCCccceeEE-EEEEee-cCCCCCeEEEEEEEEEeccccc
Confidence 46665554 588999999999999 999999999999999998742 22 222221 1122224556677776543211
Q ss_pred ----------cCCcCccceeEEEeHHHHH
Q 029277 141 ----------EWPEKNVRSRKWMSVAEAR 159 (196)
Q Consensus 141 ----------~~~~~e~~~~~W~~~~el~ 159 (196)
...+.|..++.|+|++++.
T Consensus 143 ~~~e~~~~~~~~~~~E~~~v~~vPl~~l~ 171 (217)
T 2xsq_A 143 LAVEAGATRAKDHGLEVLGLVRVPLYTLR 171 (217)
T ss_dssp HHHHHHGGGSTTBTTTEEEEEECCCSBCT
T ss_pred eecccccccccccCCceeeEEEEEHHHhh
Confidence 1123467899999999886
No 75
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.48 E-value=5.4e-13 Score=111.24 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=82.0
Q ss_pred ceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCC-----CCE-EecCcccCCCCCHHHHHHHHHHHhhceeeeecc--
Q 029277 38 RRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKG-----KGM-LFPKGGWEIDESIQEAALRETIEEAGVTGIVEC-- 109 (196)
Q Consensus 38 ~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~-----~~W-~lPgG~ve~gEs~~~Aa~REl~EEtGl~~~~~~-- 109 (196)
.+.++...+|+.+ | ++.++|+.+|... |.| .+++|++++||++.+||+||+.||+|+......
T Consensus 117 ~~~~vh~~~~~~~----~-----~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l 187 (300)
T 3dup_A 117 RAYGVHLNGYVGA----G-----ADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLSLRQNLIKECAEEADLPEALARQA 187 (300)
T ss_dssp CEEEEEEEEEESC----G-----GGCEEEEEEECTTCSSSTTCEEESEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTC
T ss_pred EEEEEEEEEEEec----C-----CeeEEEEEeCCCcccCCCCccccccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhc
Confidence 4456777777764 1 3457888777543 789 589999999999999999999999999865422
Q ss_pred eeeeeEEeeeCCCCc--eEEEEEEEEeeccccc-cCCcCccceeEEEeHHHHHhhccc
Q 029277 110 ELLGEWNFKSRAHNT--DYQGYMFPLLVQDQLA-EWPEKNVRSRKWMSVAEARKVCQH 164 (196)
Q Consensus 110 ~~l~~~~~~~~~~~~--~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~~~~~~ 164 (196)
.+.+.+.|......+ ....++|.+....... ...++|+.+++|++++|+.+++..
T Consensus 188 ~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~v~~~El~~~l~~ 245 (300)
T 3dup_A 188 IPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFMLWPAAKVVEAVRT 245 (300)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEEEEEEEHHHHHHHHHH
T ss_pred cccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhheEEEECHHHHHHHHhc
Confidence 124555554432222 3345566666554332 334568899999999999988765
No 76
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=99.33 E-value=2.3e-12 Score=100.15 Aligned_cols=95 Identities=9% Similarity=-0.047 Sum_probs=63.5
Q ss_pred CCceEEEEEEEEEeeccCCcccccCC-ceEEEEEEEcCCCCEEecCcccCCCC-CHHHHHHHHHHHhhce-eeeecceee
Q 029277 36 KGRRQVVGCIPYRYKCVKQSLDINEE-DLEVLVISSQKGKGMLFPKGGWEIDE-SIQEAALRETIEEAGV-TGIVECELL 112 (196)
Q Consensus 36 ~~~r~~vgaii~~~~~~~~g~~~~~~-~~~vLLv~~~~~~~W~lPgG~ve~gE-s~~~Aa~REl~EEtGl-~~~~~~~~l 112 (196)
+++|.++.|+++.++ .+..|.-= -...+|++.+.+|.|+||||+||+|| |+++|+.||+.||+|+ .+..... +
T Consensus 18 ~~~~hach~mlya~~---~~~lfg~~p~r~~iLmQ~R~~G~weFPGGkVe~gE~t~e~aL~REl~EElg~~~V~~~~y-~ 93 (214)
T 3kvh_A 18 PGWSHSCHAMLYAAN---PGQLFGRIPMRFSVLMQMRFDGLLGFPGGFVDRRFWSLEDGLNRVLGLGLGCLRLTEADY-L 93 (214)
T ss_dssp TTCEEEEEEEEEEEE---EEEETTTEEEEEEEEEEEETTSCEECSEEEECTTTCCHHHHHHHSCCSCC---CCCGGGE-E
T ss_pred cCccEeeEEEEEcCC---ccccccccchhheEEEeeeeCCEEeCCCccCCCCCCCHHHHHHHHHHHhhCCeeeeeeee-E
Confidence 467999999999987 22222100 01235666666799999999999999 9999999999999997 4665555 5
Q ss_pred eeEEeeeCCCCceEEEEEEEEeecc
Q 029277 113 GEWNFKSRAHNTDYQGYMFPLLVQD 137 (196)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~f~~~~~~ 137 (196)
....+.++ .....++|.+....
T Consensus 94 ~s~~~~yp---~~V~LHfY~crl~~ 115 (214)
T 3kvh_A 94 SSHLTEGP---HRVVAHLYARQLTL 115 (214)
T ss_dssp EEEEC-------CEEEEEEEEECCH
T ss_pred EEEeccCC---CEEEEEEEEEEeeC
Confidence 44443332 23456788877654
No 77
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=99.26 E-value=1.3e-11 Score=96.71 Aligned_cols=110 Identities=17% Similarity=0.152 Sum_probs=69.9
Q ss_pred CceEEEEEEEEEeeccCCcccccCCceEEEEEEEcCCCCEEecCcccCCCCCHHHHHHHHHHHhhc------eeeeecce
Q 029277 37 GRRQVVGCIPYRYKCVKQSLDINEEDLEVLVISSQKGKGMLFPKGGWEIDESIQEAALRETIEEAG------VTGIVECE 110 (196)
Q Consensus 37 ~~r~~vgaii~~~~~~~~g~~~~~~~~~vLLv~~~~~~~W~lPgG~ve~gEs~~~Aa~REl~EEtG------l~~~~~~~ 110 (196)
+.|..|.|+++..+ + +..+|||+++. .+.|.||||++++||++++|++||+.||+| ..+++...
T Consensus 56 g~R~sV~avil~~~---~------~~phVLLlq~~-~~~f~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~ 125 (208)
T 3bho_A 56 GMRRTVEGVLIVHE---H------RLPHVLLLQLG-TTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDC 125 (208)
T ss_dssp CSEEEEEEEEEEEE---T------TEEEEEEEEEE-TTEEECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEE
T ss_pred CCceEEEEEEEEcC---C------CCcEEEEEEcC-CCcEECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhhe
Confidence 55666555555443 1 44589999984 468999999999999999999999999999 55666666
Q ss_pred eeeeEEeeeCC---------C--CceEEEEEEEEeeccccc-cCCcCccceeEEEeHHHHH
Q 029277 111 LLGEWNFKSRA---------H--NTDYQGYMFPLLVQDQLA-EWPEKNVRSRKWMSVAEAR 159 (196)
Q Consensus 111 ~l~~~~~~~~~---------~--~~~~~~~~f~~~~~~~~~-~~~~~e~~~~~W~~~~el~ 159 (196)
+|.|--..-+ + .......+|.+....... ..| ....+.=+++=|+-
T Consensus 126 -lg~wwRp~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vP--kn~kL~AvPLfely 183 (208)
T 3bho_A 126 -IGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVP--KNYKLVAAPLFELY 183 (208)
T ss_dssp -EEEEEECSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEEE--TTCEEEEEEHHHHT
T ss_pred -EEEEecCCCCCcCCCCCCcccCchhhheeeeeEecCccceEecC--CCCeEEeecHHhhh
Confidence 7764211100 0 113345677766654321 112 23456667777763
No 78
>3b71_D T-cell surface glycoprotein CD4; four-helix bundle, protein-protein complex, ATP-binding, CEL junction, kinase, nucleotide-binding, phosphorylation; 2.82A {Homo sapiens}
Probab=29.88 E-value=14 Score=18.38 Aligned_cols=6 Identities=33% Similarity=0.667 Sum_probs=4.1
Q ss_pred ccccCC
Q 029277 191 GTCSLS 196 (196)
Q Consensus 191 ~~~~~~ 196 (196)
++|||+
T Consensus 16 KTCqC~ 21 (26)
T 3b71_D 16 KTCQCP 21 (26)
T ss_pred ccccCC
Confidence 577775
No 79
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=20.62 E-value=52 Score=20.25 Aligned_cols=17 Identities=6% Similarity=0.008 Sum_probs=14.2
Q ss_pred HHHHHHHhhceeeeecc
Q 029277 93 ALRETIEEAGVTGIVEC 109 (196)
Q Consensus 93 a~REl~EEtGl~~~~~~ 109 (196)
-+|++.||||..+.+..
T Consensus 26 ~I~~I~e~tg~~I~i~~ 42 (71)
T 1vig_A 26 NINRIKDQYKVSVRIPP 42 (71)
T ss_dssp HHHHHHHHTCCEEECCC
T ss_pred cHHHHHHHHCCEEEECC
Confidence 37999999999987754
Done!