Your job contains 1 sequence.
>029286
MEDKQETLKTASKPRGGGEPIRSIDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPFVC
DRKPGVSCEDPADIEYDASRVWVIDRPGIPKTPGGFKRSLVLRKDFSKMDAYYITPTGKK
LRTLNEVAGFLAANPEYSDVSLSDFTFSVPKVMDDTIPEDVVKKGSASSDAKRKPKTSKG
VVGDGTARDEGSVAMH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029286
(196 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2099187 - symbol:MBD4 "methyl-CPG-binding doma... 564 1.3e-54 1
TAIR|locus:505006513 - symbol:MBD1 "methyl-CPG-binding do... 525 1.7e-50 1
TAIR|locus:2182643 - symbol:MBD02 "methyl-CPG-binding dom... 332 4.9e-30 1
TAIR|locus:505006418 - symbol:MBD3 "methyl-CPG-binding do... 265 6.1e-23 1
TAIR|locus:504954793 - symbol:MBD12 "methyl-CPG-binding d... 219 4.6e-18 1
>TAIR|locus:2099187 [details] [associations]
symbol:MBD4 "methyl-CPG-binding domain 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008327 "methyl-CpG binding" evidence=ISS]
[GO:0051747 "cytosine C-5 DNA demethylase activity" evidence=IDA]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
SMART:SM00391 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 Gene3D:3.30.890.10 EMBL:AL163816 GO:GO:0008327
HOGENOM:HOG000241427 EMBL:BT010516 EMBL:AK176600 IPI:IPI00524248
PIR:T48092 RefSeq:NP_191862.1 UniGene:At.66481 HSSP:Q9UNZ9
ProteinModelPortal:Q9LYB9 SMR:Q9LYB9 PaxDb:Q9LYB9 PRIDE:Q9LYB9
EnsemblPlants:AT3G63030.1 GeneID:825478 KEGG:ath:AT3G63030
TAIR:At3g63030 eggNOG:NOG329704 InParanoid:Q9LYB9 OMA:SCEEPAD
PhylomeDB:Q9LYB9 ProtClustDB:CLSN2914707 Genevestigator:Q9LYB9
Uniprot:Q9LYB9
Length = 186
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 106/168 (63%), Positives = 132/168 (78%)
Query: 1 MEDKQETLKTASKPRGGGE--PIRSIDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPF 58
M++++E K A KP+ + P R IDTYAAQC+ C KWRVI+S EEYE+IR K+ E PF
Sbjct: 1 MKEEEEIGKPA-KPKAKKDVAPGRLIDTYAAQCDNCHKWRVIDSQEEYEDIRSKMLEDPF 59
Query: 59 VCDRKPGVSCEDPADIEYDASRVWVIDRPGIPKTPGGFKRSLVLRKDFSKMDAYYITPTG 118
C +K G+SCE+PADI+YD+SR WVID+PG+PKTP GFKRSLVLRKD+SKMD YY TPTG
Sbjct: 60 NCQKKQGMSCEEPADIDYDSSRTWVIDKPGLPKTPKGFKRSLVLRKDYSKMDTYYFTPTG 119
Query: 119 KKLRTLNEVAGFLAANPEYSDVSLSDFTFSVPKVMDDTIPEDVVKKGS 166
KKLR+ NE+A F+ ANPE+ + L DF F+VPKVM+DT+P D K GS
Sbjct: 120 KKLRSRNEIAAFVEANPEFRNAPLGDFNFTVPKVMEDTVPPDP-KLGS 166
>TAIR|locus:505006513 [details] [associations]
symbol:MBD1 "methyl-CPG-binding domain 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0008327
"methyl-CpG binding" evidence=ISS] [GO:0051747 "cytosine C-5 DNA
demethylase activity" evidence=IDA] InterPro:IPR001739
InterPro:IPR011124 InterPro:IPR016177 Pfam:PF01429 Pfam:PF07496
PROSITE:PS50982 PROSITE:PS51050 SMART:SM00391 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 SUPFAM:SSF54171 EMBL:AL161557
EMBL:AL021635 Gene3D:3.30.890.10 GO:GO:0008327 EMBL:BT015931
EMBL:BT020548 IPI:IPI00540903 PIR:T04569 RefSeq:NP_567667.2
UniGene:At.32504 HSSP:P51608 ProteinModelPortal:Q5XEN5 SMR:Q5XEN5
IntAct:Q5XEN5 PaxDb:Q5XEN5 PRIDE:Q5XEN5 EnsemblPlants:AT4G22745.1
GeneID:828371 KEGG:ath:AT4G22745 TAIR:At4g22745 eggNOG:NOG317091
HOGENOM:HOG000241427 InParanoid:Q5XEN5 OMA:DANQDYK PhylomeDB:Q5XEN5
ProtClustDB:CLSN2918164 Genevestigator:Q5XEN5 Uniprot:Q5XEN5
Length = 204
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 100/178 (56%), Positives = 127/178 (71%)
Query: 7 TLKTASKPRGGGEPIRSIDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPFVCDRKPGV 66
T+K K G P RSID +A QCEKC KWR I++ +EYE+IR ++ E PF C K GV
Sbjct: 38 TIKVQKK---AGTPGRSIDVFAVQCEKCMKWRKIDTQDEYEDIRSRVQEDPFFCKTKEGV 94
Query: 67 SCEDPADIEYDASRVWVIDRPGIPKTPGGFKRSLVLRKDFSKMDAYYITPTGKKLRTLNE 126
SCED D+ YD+SR WVID+PG+P+TP GFKRSL+LRKD+SKMDAYYITPTGKKL++ NE
Sbjct: 95 SCEDVGDLNYDSSRTWVIDKPGLPRTPRGFKRSLILRKDYSKMDAYYITPTGKKLKSRNE 154
Query: 127 VAGFLAANPEYSDVSLSDFTFSVPKVMDDTIPEDVVKKGSASSDAKRKPKTSKGVVGD 184
+A F+ AN +Y L DF F+VPKVM++T+P ++ SD R PK S+ V D
Sbjct: 155 IAAFIDANQDYKYALLGDFNFTVPKVMEETVPSGIL------SD--RTPKPSRKVTID 204
>TAIR|locus:2182643 [details] [associations]
symbol:MBD02 "methyl-CPG-binding domain protein 02"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051747 "cytosine C-5 DNA demethylase
activity" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
SUPFAM:SSF54171 Gene3D:3.30.890.10 EMBL:AB025636 EMBL:AF058826
EMBL:AY088026 EMBL:BT025800 EMBL:BT005718 EMBL:AK228378
IPI:IPI00547921 PIR:T01176 RefSeq:NP_001190421.1 RefSeq:NP_198383.1
RefSeq:NP_974850.1 UniGene:At.24132 ProteinModelPortal:Q8LA53
SMR:Q8LA53 IntAct:Q8LA53 STRING:Q8LA53 PaxDb:Q8LA53 PRIDE:Q8LA53
DNASU:833487 EnsemblPlants:AT5G35330.1 EnsemblPlants:AT5G35330.2
EnsemblPlants:AT5G35330.3 GeneID:833487 KEGG:ath:AT5G35330
TAIR:At5g35330 eggNOG:NOG239994 HOGENOM:HOG000243216
InParanoid:Q8LA53 OMA:ADVYYVA PhylomeDB:Q8LA53
ProtClustDB:CLSN2716414 Genevestigator:Q8LA53 Uniprot:Q8LA53
Length = 272
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 71/174 (40%), Positives = 100/174 (57%)
Query: 2 EDKQETLKTASKPRGGGEPIRSIDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPFVCD 61
+ ++E L S+P SI + QC CFKWR++ S ++YEEIR ++ E PF CD
Sbjct: 34 DTEEEVLPVQSQPLSSRTQCPSIGAFTVQCASCFKWRLMPSMQKYEEIREQLLENPFFCD 93
Query: 62 R----KPGVSCEDPADIEYDASRVWVIDRPGIPKTPGGFKRSLVLRKDFSKM--DAYYIT 115
KP +SC+ PADI D +R+W ID+P I + P G++R L +R + D YY+
Sbjct: 94 TAREWKPDISCDVPADIYQDGTRLWAIDKPNISRPPAGWQRLLRIRGEGGTRFADVYYVA 153
Query: 116 PTGKKLRTLNEVAGFLAANPEY--SDVSLSDFTFSVPKVMDDTIPEDVVKKGSA 167
P+GKKLR+ EV +L N EY V LS F+F +PK + D D V+K A
Sbjct: 154 PSGKKLRSTVEVQKYLNDNSEYIGEGVKLSQFSFQIPKPLQD----DYVRKRPA 203
>TAIR|locus:505006418 [details] [associations]
symbol:MBD3 "methyl-CPG-binding domain 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008327 "methyl-CpG binding" evidence=ISS]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 SUPFAM:SSF54171
EMBL:AF013293 EMBL:AF195115 EMBL:AL161471 Gene3D:3.30.890.10
GO:GO:0008327 HOGENOM:HOG000241427 EMBL:DQ056635 IPI:IPI00527503
RefSeq:NP_567177.1 UniGene:At.54061 ProteinModelPortal:Q4PSK1
SMR:Q4PSK1 EnsemblPlants:AT4G00416.1 GeneID:828069
KEGG:ath:AT4G00416 TAIR:At4g00416 eggNOG:NOG241580
InParanoid:Q4PSK1 OMA:TTLIDSY PhylomeDB:Q4PSK1
ProtClustDB:CLSN2917464 Genevestigator:Q4PSK1 Uniprot:Q4PSK1
Length = 163
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 58/133 (43%), Positives = 80/133 (60%)
Query: 24 IDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPFVCDRKPGVSCEDPADI--EYDASRV 81
ID+YAAQC KC K R I S E+YEEIR K E F C R CE+P D+ +D+ +
Sbjct: 9 IDSYAAQCWKCLKVRSIESQEDYEEIRSKTLEKFFECKR-----CEEPGDMVMNFDSLTM 63
Query: 82 -WVIDRPGIPKTPGGFKRSLVLRKDFSKMDAYY--ITPTGKKLRTLNEVAGFLAANPEYS 138
W D IPKTP G KR LV+R + K+D YY + P K+ +++ EVA F+ E+
Sbjct: 64 RWFQDEHSIPKTPQGLKRVLVVRTNCVKVDVYYESLAPRRKRFKSIKEVATFIEDKEEFK 123
Query: 139 DVSLSDFTFSVPK 151
D++L + +F+ PK
Sbjct: 124 DMTLEEVSFAAPK 136
>TAIR|locus:504954793 [details] [associations]
symbol:MBD12 "methyl-CPG-binding domain 12"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008327 "methyl-CpG binding" evidence=ISS]
InterPro:IPR001739 InterPro:IPR011124 InterPro:IPR016177
Pfam:PF01429 Pfam:PF07496 PROSITE:PS50982 PROSITE:PS51050
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 SUPFAM:SSF54171
Gene3D:3.30.890.10 GO:GO:0008327 EMBL:AB025636 EMBL:AF058826
IPI:IPI00521656 RefSeq:NP_974851.1 UniGene:At.51429
ProteinModelPortal:Q9FZP6 SMR:Q9FZP6 EnsemblPlants:AT5G35338.2
GeneID:833492 KEGG:ath:AT5G35338 TAIR:At5g35338 eggNOG:NOG276449
HOGENOM:HOG000152600 InParanoid:Q9FZP6 OMA:CKKWRLI PhylomeDB:Q9FZP6
ProtClustDB:CLSN2915218 Genevestigator:Q9FZP6 Uniprot:Q9FZP6
Length = 155
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 59/157 (37%), Positives = 82/157 (52%)
Query: 30 QCEKCFKWRVINSSEEYEEIRCKIAEIPFVCDRK----PGVSCEDPADIEYDASRVWVID 85
QC C KWR+I S + Y I+ + PFVC P +SC P D W
Sbjct: 3 QCTDCKKWRLIPSMQHYNIIKETQLQTPFVCGTTSGWTPNMSCNVPQD--GTTCDTW--- 57
Query: 86 RPGIPKTPGGFKRSLVLRKDFSKM-DAYYITPTGKKLRTLNEVAGFLAANPEY--SDVSL 142
P IP P G+ RS+ +R + +K D YY P+G++LR+ EV FL +PEY V+
Sbjct: 58 -PSIPPIPTGWSRSVHIRSESTKFADVYYFPPSGERLRSSAEVQSFLDNHPEYVREGVNR 116
Query: 143 SDFTFSVPKVMDDTIPEDVVKKGSASSDAKRKPKTSK 179
S F+F +PK +DD + VKK + KR+ K+SK
Sbjct: 117 SQFSFQIPKPLDD----NYVKK--RTRPVKRR-KSSK 146
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 196 196 0.00080 111 3 11 23 0.39 33
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 578 (61 KB)
Total size of DFA: 169 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.46u 0.10s 17.56t Elapsed: 00:00:01
Total cpu time: 17.46u 0.10s 17.56t Elapsed: 00:00:01
Start: Fri May 10 13:30:41 2013 End: Fri May 10 13:30:42 2013