Citrus Sinensis ID: 029286


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
MEDKQETLKTASKPRGGGEPIRSIDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPFVCDRKPGVSCEDPADIEYDASRVWVIDRPGIPKTPGGFKRSLVLRKDFSKMDAYYITPTGKKLRTLNEVAGFLAANPEYSDVSLSDFTFSVPKVMDDTIPEDVVKKGSASSDAKRKPKTSKGVVGDGTARDEGSVAMH
cccccccccccccccccccccccccEEEEEccccccEEEEccHHHHHHHHHHHccccCECccccccccccccccccccccEEEEccccccccccccEEEEEEccccccEEEEEEcccccccccHHHHHHHHHHcccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccc
**********************SIDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPFVCDRKPGVSCEDPADIEYDASRVWVIDRPGIPKTPGGFKRSLVLRKDFSKMDAYYITPTGKKLRTLNEVAGFLAANPEYSDVSLSDFTFSVPKVM*******************************************
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MEDKQETLKTASKPRGGGEPIRSIDTYAAQCEKCFKWRVINSSEEYEEIRCKIAEIPFVCDRKPGVSCEDPADIEYDASRVWVIDRPGIPKTPGGFKRSLVLRKDFSKMDAYYITPTGKKLRTLNEVAGFLAANPEYSDVSLSDFTFSVPKVMDDTIPEDVVKKGSASSDAKRKPKTSKGVVGDGTARDEGSVAMH

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Methyl-CpG-binding domain-containing protein 4 Transcriptional regulator that binds CpG, CpNpN and CpNpG (N is A, T, or C) islands in promoters regardless the DNA methylation status. Plays probably a role in gene silencing.probableQ9LYB9

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1UB1, chain A
Confidence level:very confident
Coverage over the Query: 71-169
View the alignment between query and template
View the model in PyMOL
Template: 4GUT, chain A
Confidence level:probable
Coverage over the Query: 26-91
View the alignment between query and template
View the model in PyMOL