BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029288
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2
Length = 416
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 113/185 (61%), Gaps = 12/185 (6%)
Query: 12 AATVSVV-LALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQIA 70
A +SV+ L L+L P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK L+
Sbjct: 213 AVIISVISLVLILIVAPKKGQTNILVYIAICSLIGAFSVSSVKGLGIAIKELLERKPVYK 272
Query: 71 YPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWSGQ 130
P + LT+ A+ V TQ+NYLNKALDTFN ++V+P+YYV FT++ + SAI+F++W G
Sbjct: 273 DPLFFILLTMLALSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGM 332
Query: 131 DVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEEHLITIHN 190
I + GF T+++G +LHA + +TW + + A++E L N
Sbjct: 333 KAGDIIGTLSGFFTIINGIFLLHAFKNTN--------ITW---SELMSTAKKEALSPNGN 381
Query: 191 SDYYV 195
+ YV
Sbjct: 382 QNSYV 386
>sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1
Length = 360
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 2/149 (1%)
Query: 11 VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
V AT+ V+++L+L F PR GQTNILVY+ ICS++G+++V K +GIAIK G
Sbjct: 153 VFATLVVIVSLILIFVVGPRHGQTNILVYITICSVIGAVSVSCAKGLGIAIKELFAGKPV 212
Query: 69 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
+ +P TW L VCV TQ+NYLN+ALD FN +IV+P+YYV FTT I SAI+FK+W
Sbjct: 213 LQHPLTWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVITCSAILFKEWQ 272
Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
V + + GF T++ G +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
>sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1
Length = 360
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 2/149 (1%)
Query: 11 VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
V AT+ V++AL+L F PR GQTNILVY+ ICS++G+ +V +K +GIAIK G
Sbjct: 153 VFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPV 212
Query: 69 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
+ +P W L VCV TQ+NYLN+ALD FN +IV+P+YYV FTT + SAI+FK+W
Sbjct: 213 LRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272
Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
V + + GF T++ G +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
>sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1
Length = 360
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 2/149 (1%)
Query: 11 VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
V AT+ V++AL+L F PR GQTNILVY+ ICS++G+ +V +K +GIAIK G
Sbjct: 153 VFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPV 212
Query: 69 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
+ +P W L VCV TQ+NYLN+ALD FN +IV+P+YYV FTT + SAI+FK+W
Sbjct: 213 LRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272
Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
V + + GF T++ G +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
>sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1
Length = 359
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 2/149 (1%)
Query: 11 VAATVSVVLALVLHF--EPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDGISQ 68
V AT V++AL+ F PR GQTNILVY+ ICS++G+ +V +K +GIAIK L G
Sbjct: 153 VFATFVVIVALIFIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELLAGKPV 212
Query: 69 IAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFKDWS 128
+ +P W L VCV TQ+NYLN+ALD FN +IV+P+YYV FTT + SAI+FK+W
Sbjct: 213 LQHPLAWILLFSLVVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQ 272
Query: 129 GQDVSGIASEICGFITVLSGTIILHATRE 157
V + + GF T++ G +LHA ++
Sbjct: 273 DMPVDDVIGTLSGFFTIIVGIFLLHAFKD 301
>sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1
Length = 410
Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 99/160 (61%)
Query: 2 FQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKL 61
+ F+ + + L L+L P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK
Sbjct: 204 LRDPGFISFAVIVTVISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKE 263
Query: 62 TLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA 121
++ +P + L V + V TQ+NYLNKALDTFN +IV+P+YYV FT++ + SA
Sbjct: 264 LIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSIVTPIYYVFFTSMVVTCSA 323
Query: 122 IMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 161
I+F++W G I + GF T++ G +LHA + + T
Sbjct: 324 ILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363
>sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1
Length = 410
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 99/160 (61%)
Query: 2 FQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKL 61
+ F+ + + L L+L P+ GQTNILVY+ ICSL+G+ +V S+K +GIAIK
Sbjct: 204 LRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKE 263
Query: 62 TLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA 121
++ +P + L V + V TQ+NYLNKALDTFN ++V+P+YYV FT++ + SA
Sbjct: 264 LIEWKPVYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSA 323
Query: 122 IMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQT 161
I+F++W G I + GF T++ G +LHA + + T
Sbjct: 324 ILFQEWYGMTAGDIIGTLSGFFTIIIGIFLLHAFKNTDIT 363
>sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3
Length = 466
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 100/161 (62%)
Query: 3 QSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLT 62
+ T F+++ + L L+ PR GQ NIL+Y+ ICS++G+ +V ++K +GI IK
Sbjct: 255 KDTGFIVFAVLLLVSCLILIFVIAPRYGQRNILIYIIICSVIGAFSVAAVKGLGITIKNF 314
Query: 63 LDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAI 122
G+ + +P + + A+ + TQ+N+LN+ALD FN ++V P+YYV FTT+ + +S I
Sbjct: 315 FQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIFNTSLVFPIYYVFFTTVVVTSSII 374
Query: 123 MFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTA 163
+FK+W IA + GF+T++ G +LHA ++ + + A
Sbjct: 375 LFKEWYSMSAVDIAGTLSGFVTIILGVFMLHAFKDLDISCA 415
>sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1
Length = 406
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 3 QSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLT 62
+ T F+++ V L L+ PR GQ NIL+Y+ ICS++GS +V ++K +G+ I+
Sbjct: 195 KDTGFIVFAVLLVVSCLILIFIVAPRYGQRNILIYIIICSVIGSFSVTAVKGLGVTIRNF 254
Query: 63 LDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAI 122
G+ + +P + + + ++ Q+N+LN+ALD FN ++V P+YYV FTT+ + +S +
Sbjct: 255 FQGLPVVRHPLPYILSLILGLSIIIQVNFLNRALDIFNTSLVFPIYYVFFTTVVVASSIV 314
Query: 123 MFKDWSGQDVSGIASEICGFITVLSGTIILHATREHE--QTTAP 164
+FK+W I + GF+T++ G +LHA ++ + Q + P
Sbjct: 315 LFKEWYTMSAVDIVGTLSGFVTIILGVFMLHAFKDLDINQISLP 358
>sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1
Length = 329
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 7 FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL--D 64
F+ Y+ + ++L L+ P G TNI+VY+ ICSL+GS TV S K IG+A + L +
Sbjct: 161 FVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNN 220
Query: 65 GISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMF 124
SQ A L V ++ Q Y+NKAL+ F++++ +YYV+FTTL ++ASAI+F
Sbjct: 221 PSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILF 280
Query: 125 KDWSGQDVSGIASEICGFITVLSGTIILHATRE 157
++WS + CGF TV G +++ +E
Sbjct: 281 REWSNVGLVDFLGMACGFTTVSVGIVLIQVFKE 313
>sp|Q8BHK1|NIPA1_MOUSE Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1
Length = 323
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 7 FLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL--D 64
F+ Y+ + ++L L+ P G TNI+VY+ ICSL+GS TV S K IG+A + L +
Sbjct: 155 FVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKGIGLAAQDILHNN 214
Query: 65 GISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMF 124
SQ A L V ++ Q Y+NKAL+ F++++ +YYV+FTTL ++ASAI+F
Sbjct: 215 PSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVVFTTLVLLASAILF 274
Query: 125 KDWSGQDVSGIASEICGFITVLSGTIILHATRE 157
++WS + CGF TV G +++ +E
Sbjct: 275 REWSNVGLVDFLGMACGFTTVSVGIVLIQVFKE 307
>sp|Q6P499|NPAL3_HUMAN NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1
Length = 406
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 4 STDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL 63
S FL+Y+ + ++ L+L+F NI+V L + +L+GS+TVV++KA+ + L++
Sbjct: 173 SWPFLLYMLVEI-ILFCLLLYFYKEKNANNIVVILLLVALLGSMTVVTVKAVAGMLVLSI 231
Query: 64 DGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIM 123
G Q+ YP + V Q +L++A +++++++ V Y++ TT+ I A AI
Sbjct: 232 QGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIF 291
Query: 124 FKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEE 183
+ D+ G+DV I G + G ++ R+ P Y+S D++ G +
Sbjct: 292 YLDFIGEDVLHICMFALGCLIAFLGVFLITRNRKKPIPFEP------YISMDAMPGMQNM 345
Query: 184 H 184
H
Sbjct: 346 H 346
>sp|Q5RD30|NPAL3_PONAB NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1
Length = 406
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 7/181 (3%)
Query: 4 STDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL 63
S FL+Y+ + ++ L+L+F NI+V L + +L+GS+TVV++KA+ + L++
Sbjct: 173 SWPFLLYMLVEI-ILFCLLLYFYKEKNANNIVVILLLVALLGSMTVVTVKAVAGMLVLSI 231
Query: 64 DGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIM 123
G Q+ YP + V Q +L++A +++++++ V Y++ TT+ I A AI
Sbjct: 232 QGNLQLDYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIF 291
Query: 124 FKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEE 183
+ D+ G+DV I G + G ++ R+ P Y+S D++ G +
Sbjct: 292 YLDFIGEDVLHICMFALGCLIAFLGVFLITRNRKKAIPFEP------YISMDAMPGMQNM 345
Query: 184 H 184
H
Sbjct: 346 H 346
>sp|Q9H841|NPAL2_HUMAN NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1
Length = 368
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 6 DFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLDG 65
FLIYV + ++ ++L+F R G ++++ L + +++ SLTV+S+KA+ I ++
Sbjct: 181 QFLIYVILEI-LIFCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMD 239
Query: 66 ISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIMFK 125
Q+ YP + + V Q+ +LN+A +N V PV ++ FT IIA I ++
Sbjct: 240 KMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQ 299
Query: 126 DWSGQDVSGIASEICGFITVLSGTIILHATREHEQ 160
++ G + + G G ++ RE E
Sbjct: 300 EFLGAPFLTVFIYLFGCFLSFLGVFLVTRNREKEH 334
>sp|Q8BGN5|NPAL3_MOUSE NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1
Length = 410
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Query: 4 STDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTL 63
S FL+Y+ + V+ L+L+F +I+V L + +L+GS+TVV++KA+ + L++
Sbjct: 177 SWPFLLYMLVAI-VLFCLLLYFYKERNANSIVVILLLVALLGSMTVVTVKAVSGMLVLSI 235
Query: 64 DGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASAIM 123
G Q+ YP + + Q +L++A +++++++ V Y++ TT I A AI
Sbjct: 236 QGNLQLDYPIFYVMFVCMVATAIYQATFLSEASQIYDSSLIASVGYILSTTAAITAGAIF 295
Query: 124 FKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQTTAPVGTVTWYVSGDSLKGAEEE 183
+ D+ G++ I G + G ++ R+ P Y+S D++ G ++
Sbjct: 296 YLDFLGEEALHICMFALGCLIAFLGVFLITRNRKKAIPFEP------YISMDAMPGMQDM 349
Query: 184 H 184
H
Sbjct: 350 H 350
>sp|Q91WC7|NPAL2_MOUSE NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1
Length = 383
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 1/159 (0%)
Query: 2 FQSTDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKL 61
F FL+YV + +V ++L+F R G +I+V L + +L+ SLTV+S+KA+ I L
Sbjct: 177 FVGWQFLVYVILEI-LVFCILLYFHKRKGMKHIVVLLTLVALLASLTVISVKAVSGMITL 235
Query: 62 TLDGISQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPVYYVMFTTLTIIASA 121
++ G Q+ Y + L + V Q+ +LN+A + + V PV +V FTT IIA
Sbjct: 236 SVTGKMQLTYAIFYIMLVIMIASCVFQVKFLNQATELYTMTTVVPVNHVFFTTSAIIAGI 295
Query: 122 IMFKDWSGQDVSGIASEICGFITVLSGTIILHATREHEQ 160
I ++++ G + + G G ++ RE E
Sbjct: 296 IFYQEFLGAAFLTVFIYLFGCFLSFLGVFLVTRNREKEH 334
>sp|Q6RVG2|S4A8_RAT Electroneutral sodium bicarbonate exchanger 1 OS=Rattus norvegicus
GN=Slc4a8 PE=1 SV=1
Length = 1067
Score = 31.6 bits (70), Expect = 3.6, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 5 TDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLD 64
T +I+V SV + VL F P + +Y+G+ SL G +K G+ K D
Sbjct: 856 TGLMIFVLMGCSVFMTAVLKFIPMPVLYGVFLYMGVSSLQGIQFFDRLKLFGMPAKHQPD 915
Query: 65 GI--SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 107
I + + F V C+V L ++ KA AAIV P+
Sbjct: 916 FIYLRHVPLRKVHLFTLVQLTCLV--LLWVIKASP---AAIVFPM 955
>sp|Q8JZR6|S4A8_MOUSE Electroneutral sodium bicarbonate exchanger 1 OS=Mus musculus
GN=Slc4a8 PE=2 SV=1
Length = 1089
Score = 31.6 bits (70), Expect = 3.7, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 5 TDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLD 64
T +I+V SV + VL F P + +Y+G+ SL G +K G+ K D
Sbjct: 879 TGLMIFVLMGCSVFMTAVLKFIPMPVLYGVFLYMGVSSLQGIQFFDRLKLFGMPAKHQPD 938
Query: 65 GI--SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 107
I + + F V C+V L ++ KA AAIV P+
Sbjct: 939 FIYLRHVPLRKVHLFTLVQLTCLV--LLWVIKASP---AAIVFPM 978
>sp|Q2Y0W8|S4A8_HUMAN Electroneutral sodium bicarbonate exchanger 1 OS=Homo sapiens
GN=SLC4A8 PE=1 SV=1
Length = 1093
Score = 30.4 bits (67), Expect = 7.2, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Query: 5 TDFLIYVAATVSVVLALVLHFEPRCGQTNILVYLGICSLMGSLTVVSIKAIGIAIKLTLD 64
T +I+V SV + +L F P + +Y+G+ SL G +K G+ K D
Sbjct: 881 TGLMIFVLMGCSVFMTAILKFIPMPVLYGVFLYMGVSSLQGIQFFDRLKLFGMPAKHQPD 940
Query: 65 GI--SQIAYPQTWFFLTVAAVCVVTQLNYLNKALDTFNAAIVSPV 107
I + + F + C+V L ++ KA AAIV P+
Sbjct: 941 FIYLRHVPLRKVHLFTLIQLTCLV--LLWVIKASP---AAIVFPM 980
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,199,824
Number of Sequences: 539616
Number of extensions: 2278012
Number of successful extensions: 7002
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6979
Number of HSP's gapped (non-prelim): 36
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)