BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029292
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80507|CSK2E_ARATH Putative casein kinase II subunit beta-4 OS=Arabidopsis thaliana
GN=At2g44680 PE=2 SV=1
Length = 283
Score = 276 bits (707), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 144/199 (72%), Positives = 161/199 (80%), Gaps = 20/199 (10%)
Query: 1 MYRDRGGGASKS-------EIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSV 53
MY+DR GG EI+ G +DRKRINDALDKHL+K+SPSTSR +SKDK+ SV
Sbjct: 1 MYKDRSGGGIMGGGGSSRSEILGGAIDRKRINDALDKHLKKSSPSTSRVFTSKDKD--SV 58
Query: 54 PSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNE 113
PSTS KSQL R D ES+TDSE SDVSGS+GDDTSWISWFCNLRGNE
Sbjct: 59 PSTSTAKSQLHSRSP-----------DVESDTDSEGSDVSGSEGDDTSWISWFCNLRGNE 107
Query: 114 FFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLY 173
FFCEVD++YIQDDFNLCGLS QVPYYDYALDLILDVESS+GDMFTEEQ+E+VESAAEMLY
Sbjct: 108 FFCEVDEDYIQDDFNLCGLSGQVPYYDYALDLILDVESSNGDMFTEEQHEMVESAAEMLY 167
Query: 174 GLIHVRYILTSKGMAAMVK 192
GLIHVRYILT+KGMAAM++
Sbjct: 168 GLIHVRYILTTKGMAAMME 186
>sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana GN=CKB1 PE=1
SV=1
Length = 287
Score = 267 bits (682), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/198 (72%), Positives = 164/198 (82%), Gaps = 15/198 (7%)
Query: 1 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSA-- 58
MYRDRG S+ E+V DRKRINDAL E+ SPSTSR ++ K K ++ +T+A
Sbjct: 1 MYRDRGTVNSRPEVV----DRKRINDAL----ERPSPSTSRQVNGKGKGTVTAATTTANL 52
Query: 59 -GKSQ---LDHRDSRSASLPKNK-CSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNE 113
GK Q ++HRDSRSASL KN SD+ES+TDSEESDVSGSDG+DTSWISWFCNLRGNE
Sbjct: 53 IGKQQSNNINHRDSRSASLSKNNTVSDDESDTDSEESDVSGSDGEDTSWISWFCNLRGNE 112
Query: 114 FFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLY 173
FFCEVDD+YIQDDFNLCGLSS VPYY+YALDLILDVESS G+MFTEEQNEL+ESAAEMLY
Sbjct: 113 FFCEVDDDYIQDDFNLCGLSSLVPYYEYALDLILDVESSQGEMFTEEQNELIESAAEMLY 172
Query: 174 GLIHVRYILTSKGMAAMV 191
GLIH RYILTSKG+AAM+
Sbjct: 173 GLIHARYILTSKGLAAML 190
>sp|P40229|CSK2C_ARATH Casein kinase II subunit beta' OS=Arabidopsis thaliana GN=CKB2 PE=1
SV=1
Length = 282
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/194 (67%), Positives = 150/194 (77%), Gaps = 12/194 (6%)
Query: 1 MYRDRGGGASKSEIVAGPLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGK 60
MYR+RG SKSE+V DRKRIN+ D PS S + K +++ S GK
Sbjct: 1 MYRERGMVGSKSEVV----DRKRINEIHDNR-----PSHSMSQPVNGKGKVTSTSVLMGK 51
Query: 61 SQL-DHRDSRSASLPKNKCSD--EESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCE 117
QL D SRS S+ K SD + S+TDSEES+VSGSDG+DTSWISWFCNLRGNEFFCE
Sbjct: 52 QQLHDKESSRSGSISKTNISDAVDISDTDSEESEVSGSDGEDTSWISWFCNLRGNEFFCE 111
Query: 118 VDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIH 177
VDD+YIQDDFNLCGLS QVPYYDYALDLILDVESSHG+MFTEEQNEL+ESAAEMLYG+IH
Sbjct: 112 VDDDYIQDDFNLCGLSHQVPYYDYALDLILDVESSHGEMFTEEQNELIESAAEMLYGMIH 171
Query: 178 VRYILTSKGMAAMV 191
R+ILTSKG+A+M+
Sbjct: 172 ARFILTSKGLASML 185
>sp|O81275|CSK2D_ARATH Casein kinase II subunit beta-3 OS=Arabidopsis thaliana GN=CKB3
PE=1 SV=1
Length = 276
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 20/182 (10%)
Query: 13 EIVAGPLDRKRINDALDKHLEKTSPSTS--RALSSKDKERLSVPSTSAGKSQLDHRDSRS 70
EI+ G +DRKRINDAL+K LEK+S ST+ R SSKDK+ S ST K+QL
Sbjct: 17 EILGGAIDRKRINDALNKKLEKSSTSTTTSRVFSSKDKDPFSFTST---KTQL------- 66
Query: 71 ASLPKNKCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLC 130
D ESETDSE SDVSGS+GDDTSWISWFCNLRGN+FFCEVD++YIQDDFNLC
Sbjct: 67 --------PDVESETDSEGSDVSGSEGDDTSWISWFCNLRGNDFFCEVDEDYIQDDFNLC 118
Query: 131 GLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
GLS QVPYYDYALDLILDV++S+ +MFT+EQ+E+VESAAEMLYGLIHVRYILT+KGMAAM
Sbjct: 119 GLSGQVPYYDYALDLILDVDASNSEMFTDEQHEMVESAAEMLYGLIHVRYILTTKGMAAM 178
Query: 191 VK 192
+
Sbjct: 179 TE 180
>sp|P67874|CSK2B_RAT Casein kinase II subunit beta OS=Rattus norvegicus GN=Csnk2b PE=1
SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P67873|CSK2B_RABIT Casein kinase II subunit beta OS=Oryctolagus cuniculus GN=CSNK2B
PE=2 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P67872|CSK2B_PIG Casein kinase II subunit beta OS=Sus scrofa GN=CSNK2B PE=2 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P67871|CSK2B_MOUSE Casein kinase II subunit beta OS=Mus musculus GN=Csnk2b PE=1 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P67870|CSK2B_HUMAN Casein kinase II subunit beta OS=Homo sapiens GN=CSNK2B PE=1 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P67869|CSK2B_CHICK Casein kinase II subunit beta OS=Gallus gallus GN=CSNK2B PE=2 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P67868|CSK2B_BOVIN Casein kinase II subunit beta OS=Bos taurus GN=CSNK2B PE=1 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|Q91398|CSK2B_DANRE Casein kinase II subunit beta OS=Danio rerio GN=csnk2b PE=2 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P28021|CSK2B_XENLA Casein kinase II subunit beta OS=Xenopus laevis GN=csnk2b PE=1 SV=1
Length = 215
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/98 (61%), Positives = 76/98 (77%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YIQD FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++L+E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLE 99
>sp|P08182|CSK2B_DROME Casein kinase II subunit beta OS=Drosophila melanogaster
GN=CkIIbeta PE=2 SV=2
Length = 235
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 74/98 (75%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SW++WFC LRGNEFFCEVD++YIQD FNL GL+ QVP Y ALD+ILD+E
Sbjct: 2 SSSEEVSWVTWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPNYRQALDMILDLEPEDE 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q+++ E AAEMLYGLIH RYILT++G+A M++
Sbjct: 62 LEDNPLQSDMTEQAAEMLYGLIHARYILTNRGIAQMIE 99
>sp|P28548|CSK2B_CAEEL Casein kinase II subunit beta OS=Caenorhabditis elegans GN=kin-10
PE=1 SV=2
Length = 234
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 76/99 (76%), Gaps = 3/99 (3%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWI+WFC LRGNEFFCEVD+EYIQD FNL GL+ QVP Y ALD+ILD+E
Sbjct: 2 SSSEEVSWITWFCGLRGNEFFCEVDEEYIQDRFNLTGLNEQVPKYRQALDMILDLEPD-- 59
Query: 155 DMFTEEQN-ELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
D+ N +LVE AAEMLYGLIH RYILT++G++ MV+
Sbjct: 60 DIEDNATNTDLVEQAAEMLYGLIHARYILTNRGISQMVE 98
>sp|O76485|CSK2B_SPOFR Casein kinase II subunit beta OS=Spodoptera frugiperda PE=2 SV=1
Length = 221
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/98 (58%), Positives = 74/98 (75%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
S ++ SWISWFC LRGNEFFCEVD++YI D FNL GL+ QVP+Y ALD+ILD+E
Sbjct: 2 SSSEEVSWISWFCGLRGNEFFCEVDEDYINDKFNLTGLNEQVPHYRQALDMILDLEPDDD 61
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
Q++LVE A+E+LYGLIH RYILT++G+ M++
Sbjct: 62 LDDNPNQSDLVEQASEILYGLIHARYILTNRGIGQMLE 99
>sp|Q54PF1|CK2B_DICDI Casein kinase II subunit beta OS=Dictyostelium discoideum GN=csnk2b
PE=3 SV=1
Length = 268
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 4/107 (3%)
Query: 84 ETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYAL 143
+T SEE D + D+ +WI W+CNL+GNEFF +D++YI DDFNL GLSS V +YD AL
Sbjct: 7 DTSSEEED--SLNEDEMAWIPWYCNLKGNEFFATIDEDYINDDFNLTGLSSLVQFYDSAL 64
Query: 144 DLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
+ILD S D +E+Q E +E +A++LYGLIH RYILT KG+A M
Sbjct: 65 GIILD--SDPDDPLSEDQQEALERSADILYGLIHARYILTPKGLAHM 109
>sp|P40232|CSK2B_SCHPO Casein kinase II subunit beta OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=ckb1 PE=2 SV=2
Length = 231
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 68/90 (75%), Gaps = 3/90 (3%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQ 161
W+ WF L+GNEFFCEVD+++IQD FNL GLS +VP+Y +LDLILDV D+ E Q
Sbjct: 16 WVDWFLGLKGNEFFCEVDEDFIQDRFNLTGLSHEVPHYSQSLDLILDVLDP--DLPEEVQ 73
Query: 162 NELVESAAEMLYGLIHVRYILTSKGMAAMV 191
+E VE++A LYGLIH RYILT++G+ M+
Sbjct: 74 DE-VEASARHLYGLIHARYILTAQGLYKML 102
>sp|O96863|CSK2C_DROME Casein kinase II subunit beta' OS=Drosophila melanogaster
GN=CkIIbeta2 PE=2 SV=1
Length = 219
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Query: 95 SDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHG 154
+D D++SWI WFC RGNEFFCEVD+EYIQD FNL L S V Y AL++ILD+ G
Sbjct: 2 TDSDESSWIHWFCKQRGNEFFCEVDEEYIQDKFNLNFLDSNVKNYKCALEVILDLNP--G 59
Query: 155 DMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMV 191
+ +E++AE LYGLIH R+ILT++G+ M+
Sbjct: 60 SASEDPAEPELEASAEKLYGLIHARFILTNRGIELML 96
>sp|Q8TG11|CSK2C_NEUCR Casein kinase II subunit beta-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ckb-2 PE=2 SV=1
Length = 285
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 92 VSGSDGDDTS-WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVE 150
VS S+ D S W WF + RGNE+FCE+D++YI D FNL GL+++V YY YALDLI DV
Sbjct: 5 VSESESDYASYWRDWFISSRGNEYFCEIDEDYITDRFNLTGLNTEVQYYQYALDLITDVF 64
Query: 151 SSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAMVK 192
++ E +E +A LYGL+H RYI+T++G+ M +
Sbjct: 65 DLDC---DDDMRETIEKSARHLYGLVHARYIVTTRGLQKMFE 103
>sp|O94281|CSK2C_SCHPO Probable casein kinase II subunit beta-2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC2G5.02c PE=3 SV=1
Length = 254
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 98 DDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMF 157
++ SWISWFC+ G E+F EV +++I+D FNL GL+ VP+Y+ ALDLILD + D
Sbjct: 37 ENVSWISWFCSRPGREYFVEVKEDFIEDLFNLTGLNLAVPFYNEALDLILD--RTAPDTL 94
Query: 158 TEEQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
+++E++A++LYGLIH RYI+T G+ M
Sbjct: 95 ENFDMDVIETSAQILYGLIHQRYIITRTGLHQM 127
>sp|Q8TG12|CSK2B_NEUCR Casein kinase II subunit beta-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ckb-1 PE=2 SV=1
Length = 333
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 29/128 (22%)
Query: 92 VSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVES 151
+S S G SWI+ FC+L G+E+F EV +E+I+DDFNL GL +QV Y AL++ILDVE
Sbjct: 1 MSSSSGVPESWIASFCSLLGHEYFAEVSEEFIEDDFNLTGLQTQVAMYKEALEMILDVEP 60
Query: 152 -----------------SHGDMFTEEQNE------------LVESAAEMLYGLIHVRYIL 182
S GD + E ++ES+AEMLYGLIH R+I
Sbjct: 61 EDDDDEEEEDEEDEEDMSGGDGINKPHGERRHHSRIASDLSVIESSAEMLYGLIHQRFIC 120
Query: 183 TSKGMAAM 190
+ G+ M
Sbjct: 121 SRAGIQQM 128
>sp|P43639|CSK2B_YEAST Casein kinase II subunit beta OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CKB1 PE=1 SV=1
Length = 278
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 35/135 (25%)
Query: 93 SGSDGDDTS-----WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLIL 147
+GS D+ S WI FC+ G+E+FC+V E+I+DDFN+ LS +VP+Y ALDLIL
Sbjct: 12 TGSSDDEDSGAYDEWIPSFCSRFGHEYFCQVPTEFIEDDFNMTSLSQEVPHYRKALDLIL 71
Query: 148 DVE-----------------------SSHGDMFTEEQNE-------LVESAAEMLYGLIH 177
D+E S+ G + +N+ ++E AAE LYGLIH
Sbjct: 72 DLEAMSDEEEDEDDVVEEDEVDQEMQSNDGHDEGKRRNKSPVVNKSIIEHAAEQLYGLIH 131
Query: 178 VRYILTSKGMAAMVK 192
R+ILT G+ AM +
Sbjct: 132 ARFILTKPGLQAMAE 146
>sp|O59906|CSK2B_CANAX Casein kinase II subunit beta OS=Candida albicans GN=CKB1 PE=1 SV=1
Length = 294
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 25/118 (21%)
Query: 98 DDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGD 155
D WI C L G+++F +V ++I+DDFNL GLSSQVPYY AL ILD VE++
Sbjct: 8 DYIPWIQQLCELFGHDYFVQVSQDFIEDDFNLTGLSSQVPYYREALYTILDYQVETAEDH 67
Query: 156 MF----------------TEEQN-------ELVESAAEMLYGLIHVRYILTSKGMAAM 190
T ++N L+ +AE+LYGLIH RYI++ +G+ AM
Sbjct: 68 NTDNTTTNTSNNNDSRNGTSKRNASELPNKALLAHSAELLYGLIHARYIVSKQGLTAM 125
>sp|P38930|CSK2C_YEAST Casein kinase II subunit beta' OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CKB2 PE=1 SV=1
Length = 258
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLIL-DVESSHGDMFTEE 160
WI F +G+E+FC+VD EYI D FNL L V + Y + I+ D++ S + T
Sbjct: 38 WIDLFLGRKGHEYFCDVDPEYITDRFNLMNLQKTVSKFSYVVQYIVDDLDDSILENMTHA 97
Query: 161 QNELVESAAEMLYGLIHVRYILTSKGMAAM 190
+ E +ES + LYGLIH RYI+T KG+ M
Sbjct: 98 RLEQLESDSRKLYGLIHARYIITIKGLQKM 127
>sp|Q7KV14|STEL3_DROME Stellate protein CG33238 OS=Drosophila melanogaster GN=Ste:CG33238
PE=1 SV=3
Length = 172
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 92 VSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--V 149
+S + +++SWI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL +
Sbjct: 1 MSSLENNNSSWIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVI 56
Query: 150 ESSHGDMFTEEQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
+SS G ++ +E+ YG+IH RYI + +G+ AM
Sbjct: 57 DSSSGLLYGDEKK---------WYGMIHARYIRSERGLIAM 88
>sp|Q24536|SSL_DROME Suppressor-of-stellate-like protein OS=Drosophila melanogaster
GN=Ssl PE=2 SV=1
Length = 219
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 99 DTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFT 158
D SWI WF ++G+EF C V +EYIQD FNL GL + L+++LD E + D
Sbjct: 11 DGSWIDWFLGIKGHEFSCRVPNEYIQDKFNLTGLE----FDSQTLEVVLDPEFDNEDWDC 66
Query: 159 EEQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
E+ + LYG+IH RYI++ +G+ M
Sbjct: 67 AEEKK--------LYGMIHARYIVSPRGIEDM 90
>sp|Q9NIV2|STEL8_DROME Stellate orphon protein at 12D OS=Drosophila melanogaster
GN=Ste12DOR PE=1 SV=3
Length = 171
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGDMFTE 159
WI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL ++SS G ++ +
Sbjct: 11 WIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVIDSSSGLLYGD 66
Query: 160 EQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
E+ YG+IH RYI + +G+ AM
Sbjct: 67 EKK---------WYGMIHARYIRSERGLIAM 88
>sp|Q7KV15|STEL4_DROME Stellate protein CG33239/CG33241 OS=Drosophila melanogaster
GN=Ste:CG33239 PE=1 SV=2
Length = 172
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGDMFTE 159
WI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL ++SS G ++ +
Sbjct: 11 WIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVIDSSSGLLYGD 66
Query: 160 EQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
E+ YG+IH RYI + +G+ AM
Sbjct: 67 EKK---------WYGMIHARYIRSERGLIAM 88
>sp|Q7KV13|STEL2_DROME Stellate protein CG33237 OS=Drosophila melanogaster GN=Ste:CG33237
PE=1 SV=2
Length = 172
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGDMFTE 159
WI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL ++SS G ++ +
Sbjct: 11 WIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVIDSSSGLLYGD 66
Query: 160 EQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
E+ YG+IH RYI + +G+ AM
Sbjct: 67 EKK---------WYGMIHARYIRSERGLIAM 88
>sp|Q7KV12|STEL1_DROME Stellate protein CG33236/CG33240/CG33244/CG33245 OS=Drosophila
melanogaster GN=Ste:CG33236 PE=1 SV=2
Length = 172
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGDMFTE 159
WI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL ++SS G ++ +
Sbjct: 11 WIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVIDSSSGLLYGD 66
Query: 160 EQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
E+ YG+IH RYI + +G+ AM
Sbjct: 67 EKK---------WYGMIHARYIRSERGLIAM 88
>sp|Q7KV19|STEL5_DROME Stellate protein CG33243 OS=Drosophila melanogaster GN=Ste:CG33243
PE=1 SV=2
Length = 172
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 15/91 (16%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGDMFTE 159
WI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL ++SS G ++ +
Sbjct: 11 WIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVIDSSSGLLYGD 66
Query: 160 EQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
E+ YG+IH RYI + +G+ AM
Sbjct: 67 EKK---------WYGMIHARYIRSERGLIAM 88
>sp|Q7KV23|STEL7_DROME Stellate protein CG33247 OS=Drosophila melanogaster GN=Ste:CG33247
PE=1 SV=2
Length = 172
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGDMFTE 159
WI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL ++SS G ++ +
Sbjct: 11 WIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVIDSSSGLLYGD 66
Query: 160 EQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
E+ YG+IH RYI +G+ AM
Sbjct: 67 EKK---------WYGMIHARYIRAERGLIAM 88
>sp|Q7KV22|STEL6_DROME Stellate protein CG33246 OS=Drosophila melanogaster GN=Ste:CG33246
PE=1 SV=2
Length = 172
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 15/91 (16%)
Query: 102 WISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILD--VESSHGDMFTE 159
WI WF ++GN+F C V +Y+QD FN GL Y+ LD+IL ++SS G
Sbjct: 11 WIDWFLGIKGNQFLCRVPTDYVQDTFNQMGLE----YFSEILDVILKPVIDSSSG----- 61
Query: 160 EQNELVESAAEMLYGLIHVRYILTSKGMAAM 190
L+ + YG+IH RYI + +G+ AM
Sbjct: 62 ----LLYGDGKKWYGMIHARYIRSERGLIAM 88
>sp|P38750|YHA8_YEAST Uncharacterized transporter YHL008C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YHL008C PE=1 SV=1
Length = 627
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 46 KDKERLSVPSTSAGKSQLD-HRDSRSASLPKNKCSDEESET 85
+D++RLS+P A Q + + DSR + KN+C D+ +ET
Sbjct: 267 RDRKRLSLPEYEARDEQPELNMDSRVVRIQKNECDDDATET 307
>sp|Q58654|Y1257_METJA Uncharacterized protein MJ1257 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1257 PE=4 SV=1
Length = 349
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 107 CNLRGN-EFFCE----VDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQ 161
CN RGN EF E + EY+ ++F L + +D+ +++ + + S+ +F +E
Sbjct: 104 CNRRGNHEFTSEELERIIGEYVLENFKDLNLRVNLKDWDFKINIEILQDESYISIFQDEF 163
Query: 162 NELV 165
NELV
Sbjct: 164 NELV 167
>sp|C4Y2Z9|SEY1_CLAL4 Protein SEY1 OS=Clavispora lusitaniae (strain ATCC 42720) GN=SEY1
PE=3 SV=1
Length = 834
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 113 EFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEML 172
+F E+D ++++ ++ +Q+PYY Y + L+L + +N + ML
Sbjct: 711 KFKREMDAKFVETKRSIMQHVTQIPYYIYIVILVL----GWNEFMAILRNPFFFTLLIML 766
Query: 173 YGLIHVRYILTSKGMAAMVKFRV 195
G +V Y + G A++V R+
Sbjct: 767 AGATYVMYSMNLLGPASIVVQRM 789
>sp|Q57B07|GCP_BRUAB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella abortus biovar 1 (strain 9-941) GN=gcp PE=3
SV=1
Length = 359
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPTVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|Q2YLM4|GCP_BRUA2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella abortus (strain 2308) GN=gcp PE=3 SV=1
Length = 359
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPTVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|B2S843|GCP_BRUA1 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella abortus (strain S19) GN=gcp PE=3 SV=1
Length = 359
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPTVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|A9M8M3|GCP_BRUC2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella canis (strain ATCC 23365 / NCTC 10854)
GN=gcp PE=3 SV=1
Length = 359
Score = 30.8 bits (68), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPAVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|Q8FYI5|GCP_BRUSU Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella suis biovar 1 (strain 1330) GN=gcp PE=3 SV=1
Length = 359
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPAVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|A5VSL6|GCP_BRUO2 Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC
10512) GN=gcp PE=3 SV=1
Length = 359
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPAVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|Q8YJB1|GCP_BRUME Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=gcp PE=3 SV=1
Length = 359
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPAVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|C0RFD2|GCP_BRUMB Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
OS=Brucella melitensis biotype 2 (strain ATCC 23457)
GN=gcp PE=3 SV=1
Length = 359
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 7 GGASKSEIVAGPLDRKR----INDALDKHLEKTS----------PSTSRALSSKDKERLS 52
GG ++ +V G D +R I+DAL + +KT+ P+ R D++R +
Sbjct: 140 GGHTQMVLVRGIGDYERLGTTIDDALGEAFDKTAKLLGLPYPGGPAVERMALQGDQKRFA 199
Query: 53 VPSTSAGKSQLDHRDSRSASLPKNKCSDEESETDSEESDVSGS 95
+P G+++LD S + + ++ TD + +D+ S
Sbjct: 200 LPRPLKGEARLDFSFSGLKTAVRQTATELVPLTDQDVTDICAS 242
>sp|Q8C4A5|ASXL3_MOUSE Putative Polycomb group protein ASXL3 OS=Mus musculus GN=Asxl3 PE=2
SV=3
Length = 2259
Score = 30.4 bits (67), Expect = 7.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 18 PLDRKRINDALDKHLEKTSPSTSRALSSKDKERLSVPSTSAGKSQLDH 65
P+ +N+ + H ++ SPS S +S KE S+P+ G+S + H
Sbjct: 754 PISNSSVNERM-VHQQRKSPSGSEEANSPQKEEPSIPTKPLGESLVSH 800
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,120,534
Number of Sequences: 539616
Number of extensions: 3097998
Number of successful extensions: 15714
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 12440
Number of HSP's gapped (non-prelim): 2728
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)