Query 029292
Match_columns 195
No_of_seqs 138 out of 329
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 17:14:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029292.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029292hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qf8a_ g.41.4.1 (A:) Casein k 100.0 4E-42 2.9E-46 282.8 7.0 95 100-194 1-95 (173)
2 d2ffia1 c.1.9.15 (A:10-280) Pu 11.2 62 0.0045 22.0 2.3 32 139-175 239-270 (271)
3 d3boea1 c.154.1.1 (A:224-432) 9.8 57 0.0041 25.4 1.7 21 172-192 60-80 (209)
4 g1gg6.1 b.47.1.2 (A:,B:,C:) (a 9.3 20 0.0015 25.6 -1.1 9 175-183 41-49 (238)
5 g1gj7.1 b.47.1.2 (A:,B:) Uroki 9.0 21 0.0015 25.5 -1.1 11 175-185 45-55 (256)
6 d1ehia2 d.142.1.1 (A:135-362) 8.8 50 0.0036 23.5 1.0 18 103-120 168-185 (228)
7 d1rjxb_ b.47.1.2 (B:) Plasmin( 8.4 23 0.0017 25.1 -1.1 10 175-184 48-57 (247)
8 g1rtf.1 b.47.1.2 (A:,B:) Two-c 8.3 24 0.0017 25.3 -1.1 11 175-185 44-54 (260)
9 d1cy9a_ e.10.1.1 (A:) DNA topo 7.7 73 0.0053 23.9 1.6 16 167-182 172-187 (260)
10 g1fiw.1 b.47.1.2 (L:,A:) Beta- 6.4 33 0.0024 25.1 -1.1 11 175-185 50-60 (274)
No 1
>d1qf8a_ g.41.4.1 (A:) Casein kinase II beta subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4e-42 Score=282.78 Aligned_cols=95 Identities=62% Similarity=1.084 Sum_probs=84.6
Q ss_pred CchHHHHhCCCCCeeEEecCcchhccCCccCCCCCCCCCHHHHHHHHhCCCCCCCCCCchHhHHHHHHHHHHHHhhhhhh
Q 029292 100 TSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGLIHVR 179 (195)
Q Consensus 100 ~sWI~WFcsl~gNeffceVDedYI~D~FNL~GL~~~Vp~Y~eALd~ILD~e~~~ed~~~d~~~e~Ie~~A~~LYGLIHAR 179 (195)
.|||+|||+++||+|||+||+|||+|+||||||+++||||++||++|||.+++++...+..+.+.++++|+.||||||||
T Consensus 1 ~sWI~wF~~~~gne~f~~Vd~dyI~D~FNl~GL~~~v~~y~~al~~Ild~~~~~~~~~~~~~~~~i~~~a~~LYGLIHaR 80 (173)
T d1qf8a_ 1 VSWISWFCGLRGNEFFCEVDEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHAR 80 (173)
T ss_dssp CCHHHHHHHSTTCTTCCCCCHHHHHSGGGGTTGGGTSTTHHHHHHHHTTCCCC------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHhCCCCCeEEEEeCHHHHcCcchhcCchhccccHHHHHHHHhccCCChhhhhhhhhhHHHHHHHHHHHHHhhhh
Confidence 48999999999999999999999999999999999999999999999999877654444456678999999999999999
Q ss_pred hhcCHHHHHHHHhhc
Q 029292 180 YILTSKGMAAMVKFR 194 (195)
Q Consensus 180 YIlT~~GL~~M~E~~ 194 (195)
||+|++||++|+|||
T Consensus 81 yI~T~~Gl~~m~eKy 95 (173)
T d1qf8a_ 81 YILTNRGIAQMLEKY 95 (173)
T ss_dssp HTTSHHHHHHHHHHH
T ss_pred eeecHhHHHHHHHHH
Confidence 999999999999987
No 2
>d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]}
Probab=11.24 E-value=62 Score=22.02 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=16.7
Q ss_pred HHHHHHHHhCCCCCCCCCCchHhHHHHHHHHHHHHhh
Q 029292 139 YDYALDLILDVESSHGDMFTEEQNELVESAAEMLYGL 175 (195)
Q Consensus 139 Y~eALd~ILD~e~~~ed~~~d~~~e~Ie~~A~~LYGL 175 (195)
|...++.|.....+ .++....+-..|..|||+
T Consensus 239 ~~~~~~~~~~~~l~-----~~~~~~il~~NA~rlfg~ 270 (271)
T d2ffia1 239 FGSAVEQFEALGCS-----AQLRQALLLDTARALFGF 270 (271)
T ss_dssp HHHHHHHHHHHCCC-----HHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHhcCCC-----HHHHHHHHhHHHHHHhCc
Confidence 55555555543211 122333445678888885
No 3
>d3boea1 c.154.1.1 (A:224-432) Cadmium-specific carbonic anhydrase CdCA1 {Thalassiosira weissflogii [TaxId: 67004]}
Probab=9.79 E-value=57 Score=25.41 Aligned_cols=21 Identities=24% Similarity=0.553 Sum_probs=19.1
Q ss_pred HHhhhhhhhhcCHHHHHHHHh
Q 029292 172 LYGLIHVRYILTSKGMAAMVK 192 (195)
Q Consensus 172 LYGLIHARYIlT~~GL~~M~E 192 (195)
+|++-|-|=+.|-+||+++..
T Consensus 60 vYaIA~nRg~~t~~~L~~i~~ 80 (209)
T d3boea1 60 IYAIAHNRGVTSIEGLKQITK 80 (209)
T ss_dssp THHHHHHHTCCSHHHHHHHHH
T ss_pred eEEEEeccCcccHHHHHHHHH
Confidence 699999999999999999864
No 4
>g1gg6.1 b.47.1.2 (A:,B:,C:) (alpha,gamma)-chymotrypsin(ogen) {Cow (Bos taurus) [TaxId: 9913]}
Probab=9.34 E-value=20 Score=25.63 Aligned_cols=9 Identities=33% Similarity=0.707 Sum_probs=4.1
Q ss_pred hhhhhhhcC
Q 029292 175 LIHVRYILT 183 (195)
Q Consensus 175 LIHARYIlT 183 (195)
||+.|||||
T Consensus 41 LIs~~~VLT 49 (238)
T g1gg6.1 41 LINENWVVT 49 (238)
T ss_dssp ESSSSEEEE
T ss_pred EEcCCEEEE
Confidence 344444444
No 5
>g1gj7.1 b.47.1.2 (A:,B:) Urokinase-type plasminogen activator (LMW U-PA), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.99 E-value=21 Score=25.52 Aligned_cols=11 Identities=9% Similarity=0.455 Sum_probs=6.1
Q ss_pred hhhhhhhcCHH
Q 029292 175 LIHVRYILTSK 185 (195)
Q Consensus 175 LIHARYIlT~~ 185 (195)
||+.|||||..
T Consensus 45 LIs~~~VLTaA 55 (256)
T g1gj7.1 45 LMSPCWVISAT 55 (256)
T ss_dssp EEETTEEEECG
T ss_pred EEeCCEEEEee
Confidence 55556666543
No 6
>d1ehia2 d.142.1.1 (A:135-362) D-alanine:D-lactate ligase VanA, C-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=8.75 E-value=50 Score=23.46 Aligned_cols=18 Identities=6% Similarity=0.253 Sum_probs=14.0
Q ss_pred HHHHhCCCCCeeEEecCc
Q 029292 103 ISWFCNLRGNEFFCEVDD 120 (195)
Q Consensus 103 I~WFcsl~gNeffceVDe 120 (195)
|++|+...|.-||+||..
T Consensus 168 iD~~~d~~g~~~~lEvN~ 185 (228)
T d1ehia2 168 MDFLLDENNVPYLGEPNT 185 (228)
T ss_dssp EEEEECTTCCEEEEEEES
T ss_pred EEEEEcCCCcEEEEEecC
Confidence 677777777888888874
No 7
>d1rjxb_ b.47.1.2 (B:) Plasmin(ogen), catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.38 E-value=23 Score=25.14 Aligned_cols=10 Identities=40% Similarity=0.707 Sum_probs=4.7
Q ss_pred hhhhhhhcCH
Q 029292 175 LIHVRYILTS 184 (195)
Q Consensus 175 LIHARYIlT~ 184 (195)
||+.|||||.
T Consensus 48 LIs~~~VLTa 57 (247)
T d1rjxb_ 48 LISPEWVLTA 57 (247)
T ss_dssp EEETTEEEEE
T ss_pred EEeCCEEEee
Confidence 4444555543
No 8
>g1rtf.1 b.47.1.2 (A:,B:) Two-chain tissue plasminogen activator (TC)-T-PA {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.26 E-value=24 Score=25.30 Aligned_cols=11 Identities=36% Similarity=0.573 Sum_probs=7.3
Q ss_pred hhhhhhhcCHH
Q 029292 175 LIHVRYILTSK 185 (195)
Q Consensus 175 LIHARYIlT~~ 185 (195)
|||.|||||..
T Consensus 44 lIs~~~VLTaA 54 (260)
T g1rtf.1 44 LISSCWILSAA 54 (260)
T ss_dssp ECSSSEEEECG
T ss_pred EEeCCEEEEee
Confidence 66777777753
No 9
>d1cy9a_ e.10.1.1 (A:) DNA topoisomerase I, 67K N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=7.69 E-value=73 Score=23.95 Aligned_cols=16 Identities=31% Similarity=0.584 Sum_probs=13.3
Q ss_pred HHHHHHHhhhhhhhhc
Q 029292 167 SAAEMLYGLIHVRYIL 182 (195)
Q Consensus 167 ~~A~~LYGLIHARYIl 182 (195)
.....||.||..|||.
T Consensus 172 ~~e~~iY~lI~~rfla 187 (260)
T d1cy9a_ 172 ADAQKLYQLIWRQFVA 187 (260)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4557899999999984
No 10
>g1fiw.1 b.47.1.2 (L:,A:) Beta-acrosin {Sheep (Ovis aries) [TaxId: 9940]}
Probab=6.45 E-value=33 Score=25.13 Aligned_cols=11 Identities=27% Similarity=0.685 Sum_probs=6.4
Q ss_pred hhhhhhhcCHH
Q 029292 175 LIHVRYILTSK 185 (195)
Q Consensus 175 LIHARYIlT~~ 185 (195)
||+.|||||..
T Consensus 50 LIs~~~VLTaA 60 (274)
T g1fiw.1 50 LLNSQWLLTAA 60 (274)
T ss_dssp EEETTEEEECG
T ss_pred EEeCCEEEecc
Confidence 56666666643
Done!