BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029299
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M8R4|DJ1D_ARATH Protein DJ-1 homolog D OS=Arabidopsis thaliana GN=DJ1D PE=1 SV=1
Length = 388
Score = 292 bits (748), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 138/185 (74%), Positives = 157/185 (84%)
Query: 1 MVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPT 60
MVPFQAL AFG++V CPGKK+GD CPTAVH GHQTY E+RGHNF LNATFDE+D +
Sbjct: 21 MVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLS 80
Query: 61 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAY 120
KYDGLVIPGGRAPEYLA+ SV++LV++FS SGK IASICHGQLILAAAD V GRKCTAY
Sbjct: 81 KYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAADTVNGRKCTAY 140
Query: 121 PPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTITGSDKRI 180
V P L+AAGA W+EP T CVVDG++IT ATYEGHPEFI+LF+KALGG ITG++KRI
Sbjct: 141 ATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATYEGHPEFIQLFVKALGGKITGANKRI 200
Query: 181 LFLCG 185
LFLCG
Sbjct: 201 LFLCG 205
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 124/169 (73%)
Query: 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTK 61
VPFQ+L A G VDA CP KK+GD CPTA+H G QTYSE GH FAL FD++ +
Sbjct: 215 VPFQSLQALGCQVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSS 274
Query: 62 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYP 121
YD LVIPGGRAPEYLA+N+ V+++V++F NS K +ASICHGQ ILAAA V+KGRKCTAYP
Sbjct: 275 YDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAAAGVLKGRKCTAYP 334
Query: 122 PVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALG 170
VK ++ G +W+EP+ + C DGN++TGA + GHPEF+ + LG
Sbjct: 335 AVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEFVSQLMALLG 383
>sp|O59413|PFPI_PYRHO Intracellular protease 1 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pfpI PE=1 SV=1
Length = 166
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 89/153 (58%), Gaps = 13/153 (8%)
Query: 26 VCPTAVHQSTGHQTY---------SETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYL 76
+ P + GH+ Y + G++ ++ TFD+++P ++D LV+PGGRAPE +
Sbjct: 17 IYPYHRLKEEGHEVYIASFERGTITGKHGYSVKVDLTFDKVNPEEFDALVLPGGRAPERV 76
Query: 77 AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIE 136
+N+ + + RK + GK +ASICHG IL +A V++GRK T+YP +K +I AG W++
Sbjct: 77 RLNEKAVSIARKMFSEGKPVASICHGPQILISAGVLRGRKGTSYPGIKDDMINAGVEWVD 136
Query: 137 PETMAACVVDGNIITGATYEGHPEFIRLFLKAL 169
E VVDGN ++ ++R F+K L
Sbjct: 137 AE----VVVDGNWVSSRVPADLYAWMREFVKLL 165
>sp|Q51732|PFPI_PYRFU Intracellular protease 1 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=pfpI PE=1 SV=1
Length = 166
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 17/153 (11%)
Query: 26 VCPTAVHQSTGHQTY---------SETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYL 76
+ P + GH+ Y + G++ ++ TFDE++P ++D LV+PGGRAPE +
Sbjct: 17 IYPYHRLKEEGHEVYIASFEKGVITGKHGYSVKVDLTFDEVNPDEFDALVLPGGRAPERV 76
Query: 77 AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIE 136
+N+ +++ RK GK +A+ICHG IL +A V+KGRK T+Y ++ +I AG WI+
Sbjct: 77 RLNEKAVEIARKMFTEGKPVATICHGPQILISAGVLKGRKGTSYIGIRDDMINAGVEWID 136
Query: 137 PETMAACVVDGNIIT----GATYEGHPEFIRLF 165
E VVDGN ++ G Y EF++L
Sbjct: 137 RE----VVVDGNWVSSRHPGDLYAWMREFVKLL 165
>sp|Q9V1F8|PFPI_PYRAB Intracellular protease 1 OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pfpI PE=3 SV=1
Length = 166
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 80/125 (64%), Gaps = 8/125 (6%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQL 104
G+ ++ F+E++P ++D LV+PGGRAPE + +N+ +++ +K + GK +ASICHG
Sbjct: 45 GYTVNVDLAFEEVNPDEFDALVLPGGRAPERVRLNEKAVEIAKKMFSEGKPVASICHGPQ 104
Query: 105 ILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIIT----GATYEGHPE 160
IL +A V++GR+ T+YP +K +I AG W++ E VVDGN ++ G Y E
Sbjct: 105 ILISAGVLRGRRGTSYPGIKDDMINAGVDWVDAE----VVVDGNWVSSRVPGDLYAWMRE 160
Query: 161 FIRLF 165
F++L
Sbjct: 161 FVKLL 165
>sp|Q5JGM7|PFPI_PYRKO Intracellular protease 1 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pfpI PE=3 SV=1
Length = 166
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 86/153 (56%), Gaps = 17/153 (11%)
Query: 26 VCPTAVHQSTGHQTY--SETRG-----HNFALNA--TFDEIDPTKYDGLVIPGGRAPEYL 76
+ P + GH+ Y S RG H + +N FDE+DP ++D LV+PGGRAPE +
Sbjct: 17 IYPLHRIKEEGHEVYVASFQRGKITGKHGYTVNVDLAFDEVDPDEFDALVLPGGRAPEIV 76
Query: 77 AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIE 136
+N+ + + +K GK +ASICHG IL +A V+KGRK T+ ++ + AGA WI+
Sbjct: 77 RLNEKAVAITKKMFEDGKPVASICHGPQILISAGVLKGRKGTSTVTIRDDVKNAGAEWID 136
Query: 137 PETMAACVVDGNIIT----GATYEGHPEFIRLF 165
E VVDGN ++ G Y EF++L
Sbjct: 137 AE----VVVDGNWVSSRHPGDLYAWMREFVKLL 165
>sp|P45470|YHBO_ECOLI Protein YhbO OS=Escherichia coli (strain K12) GN=yhbO PE=1 SV=2
Length = 172
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 50 LNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109
++ + DE+ P ++D L++PGG +P+YL ++ + R F NSGK + +ICHG +L +A
Sbjct: 54 IDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 113
Query: 110 DVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGN-IITGATYEGHPEFIRLFLKA 168
DV++GRK TA P+ + AGA + + E VVD + ++T T + P F R L+
Sbjct: 114 DVIRGRKLTAVKPIIIDVKNAGAEFYDQE----VVVDKDQLVTSRTPDDLPAFNREALRL 169
Query: 169 LGG 171
LG
Sbjct: 170 LGA 172
>sp|O28987|Y1281_ARCFU Uncharacterized protein AF_1281 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1281 PE=3 SV=1
Length = 168
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 34 STGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSG 93
S+ + +G+ + T++++ Y GLVIPGG++PE + +N+ +++V+ F G
Sbjct: 34 SSSLEVRVGKKGYQVRPDLTYEDVKVEDYAGLVIPGGKSPERVRINERAVEIVKDFLELG 93
Query: 94 KTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGA 153
K +A+ICHG +L +A VKGR+ T++ ++ LIAAGA + + VVDGN+IT
Sbjct: 94 KPVAAICHGPQLLISAMAVKGRRMTSWIGIRDDLIAAGALYED----RPVVVDGNVITSR 149
Query: 154 TYEGHPEFIRLFLKAL 169
+ P F +K L
Sbjct: 150 MPDDLPYFCGELIKIL 165
>sp|Q58377|Y967_METJA Uncharacterized protein MJ0967 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0967 PE=3 SV=1
Length = 205
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 20/150 (13%)
Query: 28 PTAVHQSTGHQT--YSETRG-------HNFALNATFDEIDPTKYDGLVIPGGR-APEYLA 77
P AV +S G + S T+G + + T +++P Y +VI GG + EYL
Sbjct: 51 PMAVFESNGLKVDVVSTTKGECVGMLGNKITVEKTIYDVNPDDYVAIVIVGGIGSKEYLW 110
Query: 78 MNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPV--LIAAGASWI 135
N +I+LV++F N K +++IC ++LA A ++KG+K T YP + + L AGA +
Sbjct: 111 NNTKLIELVKEFYNKNKVVSAICLSPVVLARAGILKGKKATVYPAPEAIEELKKAGAIYE 170
Query: 136 EPETMAACVVDGNIITGATYEGHPEFIRLF 165
+ VVDGN+IT + P++ RLF
Sbjct: 171 D----RGVVVDGNVITAKS----PDYARLF 192
>sp|O06006|YRAA_BACSU Putative cysteine protease YraA OS=Bacillus subtilis (strain 168)
GN=yraA PE=2 SV=2
Length = 169
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 4/125 (3%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQL 104
G ++ ++D + +D L+IPGG +P+ L +D + + F + K + +ICHG
Sbjct: 48 GEKVKIDKAISDVDASDFDALLIPGGFSPDLLRADDRPGEFAKAFVENKKPVFAICHGPQ 107
Query: 105 ILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRL 164
+L D++KG+ T Y ++ LI AGA++ + E VV NI+T T + F R
Sbjct: 108 VLIDTDLLKGKDITGYRSIRKDLINAGANYKDAE----VVVSHNIVTSRTPDDLEAFNRE 163
Query: 165 FLKAL 169
L L
Sbjct: 164 SLNLL 168
>sp|P80876|GS18_BACSU General stress protein 18 OS=Bacillus subtilis (strain 168) GN=yfkM
PE=1 SV=3
Length = 172
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 29 TAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVIDLVRK 88
T + + G + ++A+ D+++ + +D L+IPGG +P+ L +D + +
Sbjct: 33 TVIEKEKGKTVKGKQGTAEVTVDASIDDVNSSDFDALLIPGGFSPDQLRADDRFVQFTKA 92
Query: 89 FSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGN 148
F K + +ICHG +L A + GRK T Y ++ + AGA ++ E + V
Sbjct: 93 FMTDKKPVFAICHGPQLLINAKALDGRKATGYTSIRVDMENAGADVVDKEVV---VCQDQ 149
Query: 149 IITGATYEGHPEFIRLFLKAL 169
++T T + P F R L L
Sbjct: 150 LVTSRTPDDIPAFNRESLALL 170
>sp|Q8CRV8|Y1560_STAES Uncharacterized protein SE_1560 OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=SE_1560 PE=3 SV=1
Length = 172
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 26 VCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VI 83
+ TA H+ G G ++ + + P YD L+IPGG +P++L ++
Sbjct: 35 IGDTANHEVVGKH------GEKVTVDVSIADAKPENYDALLIPGGFSPDHLRGDEEGRYG 88
Query: 84 DLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAAC 143
+ F+ + +ICHG L+L D +KGR T V+ L AGA+ ++ +
Sbjct: 89 TFAKYFTKNDVPTFAICHGPLVLVDTDDLKGRTITGVINVRKDLSNAGANVVD----ESV 144
Query: 144 VVDGNIITGATYEGHPEFIRLFLKAL 169
VVD NI+T + +F R +K L
Sbjct: 145 VVDNNIVTSRVPDDLDDFNREIVKKL 170
>sp|Q5HN59|Y1413_STAEQ Uncharacterized protein SERP1413 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=SERP1413 PE=3 SV=1
Length = 172
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 12/146 (8%)
Query: 26 VCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VI 83
+ TA H+ G G ++ + + P YD L+IPGG +P++L ++
Sbjct: 35 IGDTANHEVVGKH------GEKVTVDVSIADAKPENYDALLIPGGFSPDHLRGDEEGRYG 88
Query: 84 DLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAAC 143
+ F+ + +ICHG L+L D +KGR T V+ L AGA+ ++ +
Sbjct: 89 TFAKYFTKNDVPTFAICHGPLVLVDTDDLKGRTITGVINVRKDLSNAGANVVD----ESV 144
Query: 144 VVDGNIITGATYEGHPEFIRLFLKAL 169
VVD NI+T + +F R +K L
Sbjct: 145 VVDNNIVTSRVPDDLDDFNREIVKKL 170
>sp|Q49WT1|Y1625_STAS1 Uncharacterized protein SSP1625 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP1625 PE=3 SV=1
Length = 172
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ + + P YD L+IPGG +P++L ++ + F+ + +ICHG
Sbjct: 48 GEKVTVDVSIADAKPENYDALLIPGGFSPDHLRGDEEGRYGTFTKYFTQNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
L+L D +KGR T V+ L AGA ++ + V+D NI+T + +F
Sbjct: 108 PLLLVDTDDLKGRTITGVINVRKDLSNAGAHVVD----ESVVIDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIIKKL 170
>sp|Q4L7I2|Y1084_STAHJ Uncharacterized protein SH1084 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1084 PE=3 SV=1
Length = 172
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ + + P YDGL+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVIVDVSIADAKPEDYDGLLIPGGFSPDHLRGDAEGRYGTFAKYFTKNDVPAFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D + GR TA V+ L AGA+ ++ + VVD NI+T T + +F
Sbjct: 108 PQILIDTDDLNGRTLTAVLNVRKDLSNAGANVVD----ESVVVDKNIVTSRTPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|Q49YS0|Y918_STAS1 Uncharacterized protein SSP0918 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=SSP0918 PE=3 SV=1
Length = 172
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 36 GHQTYSET---RGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFS 90
G Q SE G A++ + + P +DGL+IPGG +P++L + + F+
Sbjct: 36 GDQANSEVVGKHGTKVAVDVSIADAKPEDFDGLLIPGGFSPDHLRGDAEGRYGTFAKYFT 95
Query: 91 NSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNII 150
+ +ICHG IL D + GR TA V+ L AGA ++ + VVD NI+
Sbjct: 96 KNDVPAFAICHGPQILIDTDDLNGRTLTAVLNVRKDLANAGAQVVD----ESVVVDKNIV 151
Query: 151 TGATYEGHPEFIRLFLKALG 170
T T + +F R + L
Sbjct: 152 TSRTPDDLDDFNREIVNQLN 171
>sp|Q6GFI2|Y1965_STAAR Uncharacterized protein SAR1965 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1965 PE=3 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ E P YD L+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D +KGR TA V+ L AGA ++ + VVD NI+T + +F
Sbjct: 108 PQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVD----ESVVVDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|P0A0K3|Y2013_STAA8 Uncharacterized protein SAOUHSC_02013 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_02013 PE=3 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ E P YD L+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D +KGR TA V+ L AGA ++ + VVD NI+T + +F
Sbjct: 108 PQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVD----ESVVVDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|Q5HEP9|Y1933_STAAC Uncharacterized protein SACOL1933 OS=Staphylococcus aureus (strain
COL) GN=SACOL1933 PE=3 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ E P YD L+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D +KGR TA V+ L AGA ++ + VVD NI+T + +F
Sbjct: 108 PQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVD----ESVVVDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|P0A0K0|Y1875_STAAM Uncharacterized protein SAV1875 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1875 PE=3 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ E P YD L+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D +KGR TA V+ L AGA ++ + VVD NI+T + +F
Sbjct: 108 PQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVD----ESVVVDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|P0A0K2|Y1815_STAAW Uncharacterized protein MW1815 OS=Staphylococcus aureus (strain
MW2) GN=MW1815 PE=3 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ E P YD L+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D +KGR TA V+ L AGA ++ + VVD NI+T + +F
Sbjct: 108 PQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVD----ESVVVDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|Q6G859|Y1797_STAAS Uncharacterized protein SAS1797 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1797 PE=3 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ E P YD L+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D +KGR TA V+ L AGA ++ + VVD NI+T + +F
Sbjct: 108 PQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVD----ESVVVDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|P0A0K1|Y1692_STAAN Uncharacterized protein SA1692 OS=Staphylococcus aureus (strain
N315) GN=SA1692 PE=3 SV=1
Length = 171
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHG 102
G ++ E P YD L+IPGG +P++L + + F+ + +ICHG
Sbjct: 48 GEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHG 107
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFI 162
IL D +KGR TA V+ L AGA ++ + VVD NI+T + +F
Sbjct: 108 PQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVD----ESVVVDNNIVTSRVPDDLDDFN 163
Query: 163 RLFLKAL 169
R +K L
Sbjct: 164 REIVKQL 170
>sp|Q9MAH3|DJ1B_ARATH Protein DJ-1 homolog B OS=Arabidopsis thaliana GN=DJ1B PE=2 SV=1
Length = 438
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 43 TRGHNFALNATFDEIDPTKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICH 101
+R + DE + YD +V+PGG E A ++ ++++++K + S K +IC
Sbjct: 301 SRKVKLVADVLLDEAEKNSYDLIVLPGGLGGAEAFASSEKLVNMLKKQAESNKPYGAICA 360
Query: 102 G-QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIIT 151
L+ ++KG+K TA+P + L S IE + VDGN+IT
Sbjct: 361 SPALVFEPHGLLKGKKATAFPAMCSKL--TDQSHIEHRVL----VDGNLIT 405
>sp|Q54MG7|PARK7_DICDI Protein DJ-1 OS=Dictyostelium discoideum GN=DDB_G0285969 PE=3 SV=1
Length = 205
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 61 KYDGLVIPGGRAPEYL---AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKC 117
++D L IPGG A ++ V L+R F + GK IAS+C L L + ++KGR
Sbjct: 75 EFDALAIPGGFENYSFYEEAYSEDVSQLIRDFDSKGKHIASVCVAALALGKSGILKGRNA 134
Query: 118 TAYPPV-------KPVLIAAGASWIEPETMAACVVDGNIITGATYEGHP 159
T Y + L GA+ I +++ V+D N+IT + P
Sbjct: 135 TTYRNSLREHSVRQQQLRDFGANVIADQSI---VIDKNVITSYNPQTAP 180
>sp|Q8G9F9|INHA_PSEPU Isonitrile hydratase OS=Pseudomonas putida GN=inhA PE=1 SV=1
Length = 228
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 63 DGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPP 122
D + +PGG L ++ +D +R + + + S+C G L+L AA +++G++ T +
Sbjct: 64 DVICVPGGAGVGPLMEDEQTLDFIRSQAAQARYVTSVCTGSLVLGAAGLLQGKRATTHWA 123
Query: 123 VKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTITGS 176
+L GA ++ V DGN+ TG +F + L G T
Sbjct: 124 YHDLLPTLGAIPVKDR----VVRDGNLFTGGGITAGIDFALTLAQELVGVDTAQ 173
>sp|Q9FPF0|DJ1A_ARATH Protein DJ-1 homolog A OS=Arabidopsis thaliana GN=DJ1A PE=1 SV=1
Length = 392
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 43 TRGHNFALNATFDEIDPTKYDGLVIPGG-RAPEYLAMNDSVIDLVRKFSNSGKTIASICH 101
+R DE+ +D +V+PGG + A + +++++RK + + K IC
Sbjct: 255 SRKAKLVAEVLLDEVAEKSFDLIVLPGGLNGAQRFASCEKLVNMLRKQAEANKPYGGICA 314
Query: 102 G-QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIIT 151
+ ++KG+K T +P V L + S IE VVDGN+IT
Sbjct: 315 SPAYVFEPNGLLKGKKATTHPVVSDKL--SDKSHIEHR----VVVDGNVIT 359
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSGKTIASICHG- 102
G + +I + +D +V+PGG E L S+ ++V+K + G+ A+IC
Sbjct: 51 GIKMVADTLLSDITDSVFDLIVLPGGLPGGETLKNCKSLENMVKKQDSDGRLNAAICCAP 110
Query: 103 QLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEF- 161
L L +++G+K T YP L A A+ +E +DG I+T EF
Sbjct: 111 ALALGTWGLLEGKKATGYPVFMEKLAATCATAVESRVQ----IDGRIVTSRGPGTTIEFS 166
Query: 162 IRLFLKALGGTITGSDKRILFLC---GVSFCFQNL 193
I L + G IL L G F F L
Sbjct: 167 ITLIEQLFGKEKADEVSSILLLRPNPGEEFTFTEL 201
>sp|Q46948|YAJL_ECOLI Chaperone protein YajL OS=Escherichia coli (strain K12) GN=yajL
PE=1 SV=2
Length = 196
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 22 KSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGG-RAPEYLAMND 80
+ G TA S G+ + +RG +A E+ +YD +V+PGG + E +
Sbjct: 27 RGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDST 86
Query: 81 SVIDLVRKFSNSGKTIASICHG-QLILAAADVVKGRKCTAYPPVK 124
+++ V++F SG+ +A+IC +L D+ T +P +K
Sbjct: 87 LLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLK 131
>sp|Q468N4|PURQ_METBF Phosphoribosylformylglycinamidine synthase 1 OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=purQ PE=3 SV=1
Length = 232
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 54 FDEIDPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILA 107
+ + D T +DG+V+PGG + +YL A +++ V+K + GK + IC+G IL
Sbjct: 34 YKQEDLTGFDGVVVPGGFSYGDYLRAGAIAARTPIMNSVKKLAAEGKPVLGICNGFQILT 93
Query: 108 AADVVKGRKCT-AYPPVK 124
A V++G T YP +
Sbjct: 94 EARVLEGALTTNEYPKFR 111
>sp|Q8PTB0|PURQ_METMA Phosphoribosylformylglycinamidine synthase 1 OS=Methanosarcina
mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=purQ PE=3 SV=1
Length = 232
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 54 FDEIDPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILA 107
+ E T +DG+V+PGG + +YL A ++D ++K ++ GK + IC+G IL
Sbjct: 34 YKEESLTGFDGVVVPGGFSYGDYLRAGAIAARTPIMDSIKKIASEGKPVLGICNGFQILT 93
Query: 108 AADVVKGRKCT-AYPPVK 124
A +++G T YP +
Sbjct: 94 EARLLEGALTTNEYPKFR 111
>sp|Q9UX21|PURQ_SULSO Phosphoribosylformylglycinamidine synthase 1 OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=purQ PE=3 SV=1
Length = 224
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 54 FDEIDPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILA 107
+ + DP +Y+G+++PGG + +YL A + + V++ + GK + IC+G IL
Sbjct: 32 YKDFDPDRYNGVILPGGFSFGDYLRAGSIAASTETMKKVKQMAEDGKIVIGICNGFQILV 91
Query: 108 AADVVKG 114
+ ++KG
Sbjct: 92 ESGLLKG 98
>sp|O59619|PURQ_PYRHO Phosphoribosylformylglycinamidine synthase 1 OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=purQ PE=3 SV=2
Length = 223
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 62 YDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKG 114
YDG+VIPGG + +YL A V++ +R+ + G+ I IC+G IL A+++ G
Sbjct: 41 YDGVVIPGGFSYADYLRAGAIAARQKVMEEIRELAEEGRPILGICNGFQILTEANLLPG 99
>sp|Q9UXW5|PURQ_PYRAB Phosphoribosylformylglycinamidine synthase 1 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=purQ PE=3 SV=1
Length = 223
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 61 KYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKG 114
+YDG+V+PGG + +YL A +++ VR+F+ G+ + IC+G +L A ++ G
Sbjct: 40 EYDGVVLPGGFSYADYLRAGAIAARQRIMEEVREFAEEGRPVLGICNGFQVLTEAGLLPG 99
>sp|Q8VY09|DJ1C_ARATH Protein DJ-1 homolog C OS=Arabidopsis thaliana GN=DJ1C PE=2 SV=1
Length = 472
Score = 38.5 bits (88), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 19/133 (14%)
Query: 25 DVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRA-PEYLAMNDSVI 83
DV ++V +S + +G + E + YD +++PGG E L + +
Sbjct: 315 DVTVSSVERSLRITAF---QGTKIITDKLIGEAAESSYDLIILPGGHTGSERLQKSKILK 371
Query: 84 DLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYP-----PVKPVLIAAGASWIEPE 138
L+R+ SG+ + +L ++K ++ T YP P+ +I
Sbjct: 372 KLLREQHESGRIYGATNSSSTVLHKHGLLKEKRTTVYPSESDEPMNQQMIEG-------- 423
Query: 139 TMAACVVDGNIIT 151
A V+DGN+IT
Sbjct: 424 --AEVVIDGNVIT 434
>sp|Q8TPF0|PURQ_METAC Phosphoribosylformylglycinamidine synthase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=purQ PE=3 SV=1
Length = 232
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 54 FDEIDPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILA 107
+ E + T +DG+V+PGG + +YL A ++D V+K + GK + IC+G +L
Sbjct: 34 YKEENLTGFDGVVVPGGFSYGDYLRAGAIAARTPIMDSVKKIAAEGKPVLGICNGFQVLT 93
Query: 108 AADVVKGRKCT-AYPPVK 124
A ++ G T YP +
Sbjct: 94 EARLLAGALTTNEYPKFR 111
>sp|Q18FG3|PYRG_HALWD CTP synthase OS=Haloquadratum walsbyi (strain DSM 16790) GN=pyrG
PE=3 SV=1
Length = 555
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 29/179 (16%)
Query: 13 SVDAACPGKKSGDVCPTAVHQSTGH---QTYSETRGHNFALNATFD--EIDPTKYDGLVI 67
SVD A GK + +VH++ H +T +E + D E + DG+V+
Sbjct: 302 SVDVALVGKYDLEDAYMSVHEALKHAGIETQTEVTVQWVDSDEMLDHHEDRLREADGVVV 361
Query: 68 PGGRAPEYLAMNDSVIDLVRKFSNS------GKTIASICHGQLILAAADVVKGRKCTAYP 121
PGG +A I+ R+ + G +A + H Q +L AD P
Sbjct: 362 PGGFGSRGIAGKLKAIEYCREHNVPFLGLCLGFQMAVVEHAQNVLGFADAHSAELQPETP 421
Query: 122 -PVKPVL--------------IAAGASWIEPETMAACVVDGNIITGA---TYEGHPEFI 162
PV +L + A + I+P T+AA V +G + T YE +PE+I
Sbjct: 422 HPVIDILPEQYDVETMGGTMRLGAHETNIDPNTLAAAVYNGTVCTERHRHRYEVNPEYI 480
>sp|Q5JFP4|PURQ_PYRKO Phosphoribosylformylglycinamidine synthase 1 OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=purQ PE=3 SV=1
Length = 223
Score = 37.4 bits (85), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 62 YDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKG 114
+DG+V+PGG + +YL A +I+ V++F+ GK + IC+G +L A ++ G
Sbjct: 41 FDGVVLPGGFSYADYLRAGAIAARQEIIEEVKEFARDGKPVLGICNGFQVLTEAGLLPG 99
>sp|Q8U492|PURQ_PYRFU Phosphoribosylformylglycinamidine synthase 1 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=purQ
PE=3 SV=2
Length = 223
Score = 37.4 bits (85), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 62 YDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKG 114
YDG+VIPGG + +YL A +++ +R+ + G+ I IC+G IL A ++ G
Sbjct: 41 YDGVVIPGGFSYADYLRAGAIAARQRIMEEIRELAEEGRPILGICNGFQILTEAGLLPG 99
>sp|Q5SI57|PURQ_THET8 Phosphoribosylformylglycinamidine synthase 1 OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=purQ
PE=3 SV=1
Length = 227
Score = 37.0 bits (84), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 56 EIDPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109
E D +DG+ +PGG + +YL A V++ VR+F+ G+ + +C+G IL A
Sbjct: 35 ERDLRGFDGVFLPGGFSYGDYLRAGALAAKSPVMEAVRRFAEEGRYVVGVCNGFQILTEA 94
Query: 110 DVVKG 114
++ G
Sbjct: 95 GLLPG 99
>sp|Q72IH9|PURQ_THET2 Phosphoribosylformylglycinamidine synthase 1 OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=purQ PE=3 SV=1
Length = 227
Score = 37.0 bits (84), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 56 EIDPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109
E D +DG+ +PGG + +YL A V++ VR+F+ G+ + +C+G IL A
Sbjct: 35 ERDLRGFDGVFLPGGFSYGDYLRAGALAAKSPVMEAVRRFAEEGRYVVGVCNGFQILTEA 94
Query: 110 DVVKG 114
++ G
Sbjct: 95 GLLPG 99
>sp|Q97I29|META_CLOAB Homoserine O-succinyltransferase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=metA PE=3 SV=1
Length = 301
Score = 37.0 bits (84), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 20 GKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAP-EYLAM 78
G V PT +H T H++ + ++ H TF+EI K+DG+++ G AP E L+
Sbjct: 59 GNSPLQVNPTFIHTQT-HKSQNTSKEHLIKFYETFEEIKNNKFDGMIVTG--APVETLSF 115
Query: 79 N--DSVIDLVRKFSNSGKTIASICH 101
D +L R F S + S H
Sbjct: 116 ENVDYWEELCRIFDWSVTNVTSTIH 140
>sp|B1YJ04|PURQ_EXIS2 Phosphoribosylformylglycinamidine synthase 1 OS=Exiguobacterium
sibiricum (strain DSM 17290 / JCM 13490 / 255-15)
GN=purQ PE=3 SV=1
Length = 227
Score = 37.0 bits (84), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 62 YDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKG 114
YDG+++PGG + +YL A +++ V++F+ GKT+ +C+G IL A ++ G
Sbjct: 42 YDGVLLPGGFSYGDYLRCGAIAQFSPIMEEVKRFAAEGKTVLGVCNGFQILVEAGLLPG 100
>sp|Q8L1A7|PDXT_BACCI Glutamine amidotransferase subunit PdxT OS=Bacillus circulans
GN=pdxT PE=1 SV=1
Length = 190
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 61 KYDGLVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILA 107
+ DGL+IPGG + L I+ +R FSN GK + C G +++A
Sbjct: 37 ELDGLIIPGGESTTIGKLMRRYGFIEAIRDFSNQGKAVFGTCAGLIVIA 85
>sp|Q2ITP9|PURQ_RHOP2 Phosphoribosylformylglycinamidine synthase 1 OS=Rhodopseudomonas
palustris (strain HaA2) GN=purQ PE=3 SV=1
Length = 233
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 45 GHNFALNATFDEIDPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIAS 98
GH+ A+ D P D +V+PGG + +YL A V+D VRKF++ G +
Sbjct: 26 GHDAAMVWHADTELPNGTDLVVVPGGFSYGDYLRCGAIAARAPVMDAVRKFASDGGLVLG 85
Query: 99 ICHGQLILAAADVVKG 114
+C+G IL + ++ G
Sbjct: 86 VCNGFQILCESGLLPG 101
>sp|B7GFL9|PDXT_ANOFW Glutamine amidotransferase subunit PdxT OS=Anoxybacillus
flavithermus (strain DSM 21510 / WK1) GN=pdxT PE=3 SV=1
Length = 192
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 60 TKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSNSGKTIASICHGQLILA 107
T+ DGL+IPGG + + D I+ +++F+ GK + C G +ILA
Sbjct: 37 TQIDGLIIPGGESTTMRRLMDKYGFIEPLKQFAREGKPMFGTCAGLIILA 86
>sp|Q8EN04|PDXT_OCEIH Glutamine amidotransferase subunit PdxT OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=pdxT PE=3 SV=2
Length = 200
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 58 DPTKYDGLVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGR 115
D + DGL+IPGG + L + + + ++ F+N GK I C G ++L+ + GR
Sbjct: 38 DLHQLDGLIIPGGESTAIWKLIEENKLYEPIQNFANEGKAIFGTCAGLVLLSKTTI--GR 95
Query: 116 KCT 118
T
Sbjct: 96 DYT 98
>sp|Q2TBW2|COQ7_BOVIN Ubiquinone biosynthesis protein COQ7 homolog OS=Bos taurus GN=COQ7
PE=2 SV=1
Length = 217
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 1 MVPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPT 60
++PF ++ F + A GK+ C AV +S H ++ R T E +P
Sbjct: 111 LMPFWNVVGFALGAGTALLGKEGAMACTVAVEESIAHHYNNQIR--------TLMEKEPE 162
Query: 61 KYDGLV 66
KY+ L+
Sbjct: 163 KYEELL 168
>sp|P75082|Y032_MYCPN Uncharacterized protein MG029 homolog OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=MPN_032 PE=4 SV=1
Length = 108
Score = 34.3 bits (77), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 37 HQTYSETRGHN--FALNATFDEIDPTKYDGLVIPGGR-APEYLAMNDSVIDLVRKFSNSG 93
H S +G N +N +++ ++DG+ IPGG A + L + ++D +R F +
Sbjct: 36 HPNLSTVKGSNGVTLVNQITSKVNLEEFDGVFIPGGMGATKVLDHDQQLLDTIRYFKDHD 95
Query: 94 KTIASIC 100
K + +IC
Sbjct: 96 KYVFAIC 102
>sp|O43084|YHS9_SCHPO Uncharacterized protein C947.09 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC947.09 PE=3 SV=1
Length = 261
Score = 34.3 bits (77), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 31/133 (23%)
Query: 53 TFDEIDPTKYDGLVIPGGRAPEY-LAMNDSVIDLVRKFSNSGKTIASICHGQLIL----- 106
T DE++P KYD + GG A + ++ L +G +A++CHG +L
Sbjct: 114 TADEVNPDKYDIFFVAGGHATLFDFPKATNLQKLGTSIYENGGVVAAVCHGPTLLPFMKR 173
Query: 107 ----AAADVVKGRKCTAYPPV-------------------KPVLIAAGASWIE-PETMAA 142
+ +V G+ TA+ V +L AGA++I+ P
Sbjct: 174 QTSDGSVSIVCGKDVTAFDRVAEDKSKLMEALKKYNLEVLDDMLNDAGANFIKSPNPFGD 233
Query: 143 CVV-DGNIITGAT 154
V+ DG ++TG+
Sbjct: 234 FVIADGRLVTGSN 246
>sp|A0AKK9|PDXT_LISW6 Glutamine amidotransferase subunit PdxT OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=pdxT PE=3 SV=1
Length = 188
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 58 DPTKYDGLVIPGGRAP--EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILA 107
D + DGLV+PGG + + +I+ VR F+ GK I C G ++L+
Sbjct: 35 DLNELDGLVLPGGESTTMRKIMKRYDLIEPVRAFAKEGKAIFGTCAGLVLLS 86
>sp|B1HTV3|PURQ_LYSSC Phosphoribosylformylglycinamidine synthase 1 OS=Lysinibacillus
sphaericus (strain C3-41) GN=purQ PE=3 SV=1
Length = 227
Score = 33.5 bits (75), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 58 DPTKYDGLVIPGGRA-PEYL-----AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADV 111
D + +DG+++PGG + +YL A +++ V+K +++GK + +C+G IL A +
Sbjct: 38 DLSGFDGVLVPGGFSYGDYLRCGAMANQSNIMAEVKKVADAGKPVLGVCNGFQILTEAGL 97
Query: 112 VKG 114
+ G
Sbjct: 98 LPG 100
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,406,540
Number of Sequences: 539616
Number of extensions: 3172268
Number of successful extensions: 7661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 7526
Number of HSP's gapped (non-prelim): 159
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)