Query 029299
Match_columns 195
No_of_seqs 164 out of 1239
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 17:25:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029299.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029299hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hcj_A THIJ/PFPI domain protei 100.0 5.2E-39 1.8E-43 246.4 14.2 150 2-171 26-175 (177)
2 3noq_A THIJ/PFPI family protei 100.0 1.1E-35 3.8E-40 236.9 13.0 165 2-188 23-190 (231)
3 3l18_A Intracellular protease 100.0 8.2E-36 2.8E-40 226.3 11.6 148 2-169 20-167 (168)
4 3ewn_A THIJ/PFPI family protei 100.0 1.9E-35 6.4E-40 238.4 13.3 166 2-188 41-210 (253)
5 4e08_A DJ-1 beta; flavodoxin-l 100.0 1.8E-35 6.1E-40 228.9 10.1 162 2-182 23-187 (190)
6 3efe_A THIJ/PFPI family protei 100.0 7.7E-35 2.6E-39 229.2 11.9 172 2-195 23-208 (212)
7 2vrn_A Protease I, DR1199; cys 100.0 1E-34 3.6E-39 224.3 12.2 155 2-176 27-188 (190)
8 2rk3_A Protein DJ-1; parkinson 100.0 1E-34 3.5E-39 225.8 10.8 162 2-182 21-187 (197)
9 4gdh_A DJ-1, uncharacterized p 100.0 8E-35 2.7E-39 226.3 9.9 163 2-182 22-193 (194)
10 3mgk_A Intracellular protease/ 100.0 3.1E-34 1.1E-38 225.7 13.0 161 2-183 22-188 (211)
11 3uk7_A Class I glutamine amido 100.0 7.5E-34 2.6E-38 242.4 15.4 175 2-176 30-204 (396)
12 1oi4_A Hypothetical protein YH 100.0 6E-34 2E-38 221.0 13.2 150 2-170 41-192 (193)
13 3gra_A Transcriptional regulat 100.0 1.4E-34 4.9E-39 226.1 9.7 160 2-183 23-191 (202)
14 3er6_A Putative transcriptiona 100.0 6E-34 2.1E-38 223.7 12.5 160 2-182 26-198 (209)
15 3ot1_A 4-methyl-5(B-hydroxyeth 100.0 1.2E-34 4E-39 227.5 6.8 164 2-186 27-196 (208)
16 3fse_A Two-domain protein cont 100.0 1.9E-33 6.4E-38 236.6 14.3 154 2-174 28-182 (365)
17 3f5d_A Protein YDEA; unknow pr 100.0 1.2E-33 4.2E-38 221.5 10.8 166 2-194 21-194 (206)
18 2ab0_A YAJL; DJ-1/THIJ superfa 100.0 7.8E-34 2.7E-38 222.3 6.8 164 2-184 20-189 (205)
19 3uk7_A Class I glutamine amido 100.0 1.6E-32 5.6E-37 234.1 14.4 172 2-173 223-394 (396)
20 3kkl_A Probable chaperone prot 100.0 6.3E-33 2.2E-37 222.6 9.9 172 2-173 33-239 (244)
21 2fex_A Conserved hypothetical 100.0 3.5E-32 1.2E-36 210.0 11.5 152 2-175 19-175 (188)
22 1u9c_A APC35852; structural ge 100.0 3.6E-32 1.2E-36 215.2 11.7 163 2-172 33-223 (224)
23 3cne_A Putative protease I; st 100.0 2.6E-32 9E-37 208.3 10.0 145 4-169 22-174 (175)
24 3n7t_A Macrophage binding prot 100.0 3.6E-32 1.2E-36 218.4 10.4 170 1-171 38-243 (247)
25 1rw7_A YDR533CP; alpha-beta sa 100.0 3E-32 1E-36 218.6 9.4 168 2-171 33-237 (243)
26 3bhn_A THIJ/PFPI domain protei 100.0 5.1E-32 1.7E-36 216.3 10.0 158 2-184 38-201 (236)
27 1n57_A Chaperone HSP31, protei 100.0 6.1E-32 2.1E-36 222.0 7.4 170 2-173 80-281 (291)
28 1vhq_A Enhancing lycopene bios 100.0 5.4E-29 1.8E-33 198.3 7.0 161 2-173 29-211 (232)
29 3l3b_A ES1 family protein; ssg 99.9 8.2E-29 2.8E-33 198.3 5.9 151 2-158 46-218 (242)
30 1sy7_A Catalase 1; heme oxidat 99.8 3.7E-20 1.3E-24 166.8 8.8 133 2-171 552-698 (715)
31 3ttv_A Catalase HPII; heme ori 99.7 1.3E-16 4.3E-21 143.1 7.3 94 2-112 618-711 (753)
32 2iuf_A Catalase; oxidoreductas 99.5 1.6E-13 5.6E-18 122.6 9.6 112 2-171 549-677 (688)
33 3ej6_A Catalase-3; heme, hydro 99.4 1E-12 3.5E-17 117.2 9.2 86 2-112 556-649 (688)
34 3d54_D Phosphoribosylformylgly 99.0 8.9E-10 3.1E-14 85.5 6.8 56 60-115 40-101 (213)
35 1q7r_A Predicted amidotransfer 98.4 2.8E-07 9.7E-12 71.9 4.3 50 60-109 59-110 (219)
36 2nv0_A Glutamine amidotransfer 98.3 4E-07 1.4E-11 69.7 4.5 50 60-109 37-88 (196)
37 1wl8_A GMP synthase [glutamine 98.3 6.3E-07 2.2E-11 68.2 4.7 47 60-109 42-88 (189)
38 2iss_D Glutamine amidotransfer 98.2 1.1E-06 3.7E-11 68.0 3.9 50 60-109 56-107 (208)
39 3l7n_A Putative uncharacterize 98.2 6E-06 2E-10 65.1 8.0 50 60-109 44-100 (236)
40 2ywd_A Glutamine amidotransfer 98.2 1.6E-06 5.6E-11 65.8 4.6 50 60-109 38-90 (191)
41 3m3p_A Glutamine amido transfe 98.1 4.1E-06 1.4E-10 66.8 6.8 50 60-109 47-98 (250)
42 1ka9_H Imidazole glycerol phos 98.1 2.9E-06 1E-10 65.1 5.7 50 60-109 39-91 (200)
43 1qdl_B Protein (anthranilate s 98.1 1.9E-06 6.5E-11 66.0 3.6 48 61-109 45-93 (195)
44 3ugj_A Phosphoribosylformylgly 98.1 4.8E-06 1.6E-10 79.7 6.8 57 59-115 1090-1159(1303)
45 1a9x_B Carbamoyl phosphate syn 97.9 1.2E-05 4.1E-10 67.8 5.6 48 60-109 230-277 (379)
46 1o1y_A Conserved hypothetical 97.8 4.4E-05 1.5E-09 60.3 7.2 50 60-109 56-109 (239)
47 2abw_A PDX2 protein, glutamina 97.8 1.4E-05 4.6E-10 62.5 3.7 50 60-109 42-96 (227)
48 3fij_A LIN1909 protein; 11172J 97.8 1.7E-05 5.8E-10 63.2 4.2 50 60-109 60-124 (254)
49 2ywj_A Glutamine amidotransfer 97.8 3.2E-05 1.1E-09 58.4 5.3 47 60-109 36-84 (186)
50 2v4u_A CTP synthase 2; pyrimid 97.7 5.8E-05 2E-09 61.3 6.0 47 60-109 89-135 (289)
51 2a9v_A GMP synthase; structura 97.6 9.5E-05 3.3E-09 57.2 6.1 47 60-109 53-101 (212)
52 4gud_A Imidazole glycerol phos 97.5 1.2E-05 4E-10 62.0 -0.4 50 60-109 39-88 (211)
53 1gpw_B Amidotransferase HISH; 97.5 8.3E-05 2.8E-09 56.8 4.3 51 60-110 41-94 (201)
54 2vpi_A GMP synthase; guanine m 97.4 1.4E-05 4.9E-10 62.3 -0.7 47 60-109 66-112 (218)
55 2w7t_A CTP synthetase, putativ 97.4 0.0002 7E-09 57.6 5.6 46 60-108 66-111 (273)
56 1l9x_A Gamma-glutamyl hydrolas 97.3 0.00011 3.7E-09 60.4 3.5 50 60-109 85-140 (315)
57 3uow_A GMP synthetase; structu 97.3 0.00024 8.3E-09 62.7 5.7 56 54-109 43-99 (556)
58 3l4e_A Uncharacterized peptida 97.2 0.00017 5.8E-09 55.7 2.8 50 60-109 78-129 (206)
59 1fy2_A Aspartyl dipeptidase; s 97.2 0.00015 5.1E-09 56.9 2.4 51 60-110 78-130 (229)
60 3nva_A CTP synthase; rossman f 97.0 0.00085 2.9E-08 58.5 6.0 48 59-109 348-395 (535)
61 3tqi_A GMP synthase [glutamine 96.9 0.00062 2.1E-08 59.7 4.1 47 60-109 52-98 (527)
62 1vco_A CTP synthetase; tetrame 96.9 0.0014 4.9E-08 57.6 6.0 47 60-109 354-400 (550)
63 1jvn_A Glutamine, bifunctional 96.8 0.00087 3E-08 59.1 4.5 50 60-109 43-95 (555)
64 1s1m_A CTP synthase; CTP synth 96.8 0.0018 6E-08 57.0 6.4 48 59-109 341-388 (545)
65 1i1q_B Anthranilate synthase c 96.8 0.0015 5.1E-08 49.4 5.2 45 62-109 48-92 (192)
66 3r75_A Anthranilate/para-amino 96.8 0.0019 6.4E-08 58.0 6.5 51 59-109 484-537 (645)
67 2h2w_A Homoserine O-succinyltr 96.2 0.0048 1.6E-07 50.5 4.9 56 53-108 103-162 (312)
68 1gpm_A GMP synthetase, XMP ami 96.2 0.0012 4E-08 57.9 1.1 46 61-109 50-95 (525)
69 2ywb_A GMP synthase [glutamine 96.1 0.0021 7E-08 56.1 2.3 46 61-109 42-87 (503)
70 2vdj_A Homoserine O-succinyltr 95.8 0.0046 1.6E-07 50.4 2.8 51 58-108 96-150 (301)
71 2vxo_A GMP synthase [glutamine 95.7 0.0016 5.6E-08 58.9 -0.3 47 60-109 71-117 (697)
72 3en0_A Cyanophycinase; serine 94.3 0.027 9.3E-07 45.6 3.3 49 60-108 109-160 (291)
73 3rht_A (gatase1)-like protein; 81.5 2.7 9.3E-05 33.1 5.7 39 59-100 48-86 (259)
74 3tty_A Beta-GAL, beta-galactos 80.4 5.3 0.00018 35.8 7.8 59 4-103 431-490 (675)
75 1t0b_A THUA-like protein; treh 76.2 4.9 0.00017 31.4 5.6 43 59-103 65-107 (252)
76 2r47_A Uncharacterized protein 72.9 1.1 3.8E-05 32.6 1.0 51 60-111 83-134 (157)
77 2zuv_A Lacto-N-biose phosphory 72.3 4.9 0.00017 36.2 5.1 42 59-101 498-544 (759)
78 4e5v_A Putative THUA-like prot 71.4 21 0.00071 28.2 8.3 41 59-103 56-96 (281)
79 1kwg_A Beta-galactosidase; TIM 65.8 9.4 0.00032 33.8 5.7 57 4-103 431-487 (645)
80 5nul_A Flavodoxin; electron tr 56.7 7.9 0.00027 26.5 2.9 42 60-102 44-88 (138)
81 2gk3_A Putative cytoplasmic pr 47.6 14 0.00048 28.6 3.3 41 59-100 75-125 (256)
82 3soz_A ORF 245 protein, cytopl 47.4 19 0.00066 28.0 4.0 41 59-100 68-118 (248)
83 3f6r_A Flavodoxin; FMN binding 43.6 35 0.0012 23.3 4.7 42 61-102 49-94 (148)
84 3klb_A Putative flavoprotein; 38.5 16 0.00054 26.1 2.1 41 59-101 76-116 (162)
85 4ici_A Putative flavoprotein; 37.6 20 0.0007 25.8 2.6 41 59-101 85-125 (171)
86 3dfz_A SIRC, precorrin-2 dehyd 35.4 55 0.0019 24.9 4.8 72 5-97 48-119 (223)
87 1l1s_A Hypothetical protein MT 33.0 54 0.0018 21.5 4.0 43 61-104 34-76 (113)
88 3edo_A Flavoprotein, putative 31.6 28 0.00094 24.3 2.4 41 59-101 74-115 (151)
89 3i9v_6 NADH-quinone oxidoreduc 31.1 44 0.0015 24.8 3.4 40 59-102 72-111 (181)
90 2pd2_A Hypothetical protein ST 27.3 88 0.003 20.1 4.3 57 61-118 29-88 (108)
91 3ktb_A Arsenical resistance op 27.0 40 0.0014 22.7 2.4 37 124-165 65-101 (106)
92 1jg7_A BGT, DNA beta-glucosylt 26.4 44 0.0015 26.0 2.8 41 4-70 27-67 (351)
93 3ff4_A Uncharacterized protein 25.2 1.3E+02 0.0046 20.2 5.0 18 4-21 24-41 (122)
94 2fz5_A Flavodoxin; alpha/beta 25.1 85 0.0029 20.7 4.0 40 60-101 45-88 (137)
95 1tk9_A Phosphoheptose isomeras 22.8 1.4E+02 0.005 20.9 5.1 38 60-102 109-146 (188)
96 1x92_A APC5045, phosphoheptose 21.7 1.5E+02 0.0053 21.1 5.1 37 60-101 112-148 (199)
97 2xbl_A Phosphoheptose isomeras 21.3 1.6E+02 0.0054 20.9 5.1 37 60-101 115-151 (198)
98 2an1_A Putative kinase; struct 21.1 66 0.0023 25.0 3.1 35 60-102 62-96 (292)
99 3jx9_A Putative phosphoheptose 21.0 1.2E+02 0.0042 21.9 4.3 39 58-101 74-112 (170)
100 3kgk_A Arsenical resistance op 21.0 85 0.0029 21.2 3.1 37 124-165 62-98 (110)
101 2yva_A DNAA initiator-associat 20.2 1.7E+02 0.006 20.7 5.1 37 60-101 108-144 (196)
No 1
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=100.00 E-value=5.2e-39 Score=246.44 Aligned_cols=150 Identities=20% Similarity=0.246 Sum_probs=142.1
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChH
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS 81 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~ 81 (195)
.||++|+++|++|+++|+.++ +++++.|.++.+|..+++++..+||+||||||+++..+..++.
T Consensus 26 ~p~~~l~~ag~~V~~~s~~~~----------------~v~~~~G~~v~~d~~l~~v~~~~yD~liiPGG~g~~~l~~~~~ 89 (177)
T 4hcj_A 26 ESKKIFESAGYKTKVSSTFIG----------------TAQGKLGGMTNIDLLFSEVDAVEFDAVVFVGGIGCITLWDDWR 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESSSE----------------EEEETTSCEEEECEEGGGCCGGGCSEEEECCSGGGGGGTTCHH
T ss_pred HHHHHHHHCCCEEEEEECCCC----------------eEeeCCCCEEecCccHHHCCHhHCCEEEECCCccHHHHhhCHH
Confidence 699999999999999999865 5888999999999999999889999999999999888889999
Q ss_pred HHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHHH
Q 029299 82 VIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEF 161 (195)
Q Consensus 82 l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~~ 161 (195)
+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++.++.|.+.+ +|+|||+||++|+.++++|
T Consensus 90 ~~~~l~~~~~~~k~iaaIC~g~~~La~aGlL~gr~~T~~~~~~~~l~~~ga~~~~~~----vV~Dg~liTs~g~~~~~~~ 165 (177)
T 4hcj_A 90 TQGLAKLFLDNQKIVAGIGSGVVIMANAKILEEINVTCLSADESHVRHGNANIMSEN----VVVSGNIVTANGPTSSKDF 165 (177)
T ss_dssp HHHHHHHHHHTTCEEEEETTHHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECSSS----EEEETTEEEECSGGGHHHH
T ss_pred HHHHHHHHHHhCCEEEEecccHHHHHHCCCCCCCEEEEeCCHHHHHHhCCCEEecCC----EEEECCEEECCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998775 8999999999999999999
Q ss_pred HHHHHHHHcC
Q 029299 162 IRLFLKALGG 171 (195)
Q Consensus 162 ~l~li~~l~~ 171 (195)
++++++.|..
T Consensus 166 a~~lve~L~s 175 (177)
T 4hcj_A 166 ANAVVGVLNS 175 (177)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998864
No 2
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=100.00 E-value=1.1e-35 Score=236.90 Aligned_cols=165 Identities=20% Similarity=0.307 Sum_probs=147.7
Q ss_pred chhHHHHh-CCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccCh
Q 029299 2 VPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~-~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~ 80 (195)
.|++.|++ .|++|+++|++++ +|++++|+.+.++..++++ ++||+||||||.++..+..++
T Consensus 23 ~p~evl~~~~~~~v~~vs~~~~----------------~V~~~~G~~v~~d~~l~~~--~~~D~livpGG~g~~~~~~~~ 84 (231)
T 3noq_A 23 GPHDVLASLPDVQVHLIWKEPG----------------PVVASSGLVLQATTSFADC--PPLDVICIPGGTGVGALMEDP 84 (231)
T ss_dssp HHHHHHTTSTTEEEEEEESSSE----------------EEECTTSCEEEECEETTTC--CCCSEEEECCSTTHHHHTTCH
T ss_pred HHHHHHHcCCCCEEEEEECCCC----------------cEEcCCCCEEecccChhHC--CcCCEEEECCCCChhhhccCH
Confidence 58999999 8999999999875 4888899999999999986 579999999999887677899
Q ss_pred HHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHH
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPE 160 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~ 160 (195)
.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.++++|..+++. .+|+|||+|||+|+++++|
T Consensus 85 ~l~~~lr~~~~~g~~v~aiC~G~~~La~aGLL~Gr~aTthw~~~~~l~~~~~~~~~~----~vV~Dg~iiTs~G~~a~~d 160 (231)
T 3noq_A 85 QALAFIRQQAARARYVTSVSTGSLVLGAAGLLQGKRATTHWAYHELLAPLGAIPVHE----RVVRDGNLLTGGGITAGID 160 (231)
T ss_dssp HHHHHHHHHHTTCSEEEEETTHHHHHHHTTTTTTCEECCCGGGGGGTGGGTCEECCS----SEEEETTEEEECSTTHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECHHHHHHHHcCCCCCceeeecHhHHHHHHhCCCeeeCC----cEEEeCCEEECCCHHHHHH
Confidence 999999999999999999999999999999999999999999999998888887654 4999999999999999999
Q ss_pred HHHHHHHHHcCcc-ccc-ccceeeeccCcc
Q 029299 161 FIRLFLKALGGTI-TGS-DKRILFLCGVSF 188 (195)
Q Consensus 161 ~~l~li~~l~~~~-a~~-~~~~~~~~~~~~ 188 (195)
|++++|+++.++. |.+ +..++|..+.+|
T Consensus 161 ~aL~li~~~~G~~~A~~va~~l~~~~~~p~ 190 (231)
T 3noq_A 161 FALTLAAELFDAATAQRVQLQLEYAPAPPF 190 (231)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHTTCCCCCSS
T ss_pred HHHHHHHHHcCHHHHHHHHHhceeCCCCCC
Confidence 9999999988876 555 777777765444
No 3
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=100.00 E-value=8.2e-36 Score=226.31 Aligned_cols=148 Identities=34% Similarity=0.624 Sum_probs=136.5
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChH
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS 81 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~ 81 (195)
.|++.|+++|++++++|++++ ++++++|..+.++..+++++..+||+||||||.++..+..++.
T Consensus 20 ~~~~~l~~ag~~v~~vs~~~~----------------~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~ 83 (168)
T 3l18_A 20 YPLHRIKEEGHEVYVASFQRG----------------KITGKHGYSVNVDLTFEEVDPDEFDALVLPGGKAPEIVRLNEK 83 (168)
T ss_dssp HHHHHHHHTTCEEEEEESSSE----------------EEECTTSCEEEECEEGGGCCGGGCSEEEECCBSHHHHHTTCHH
T ss_pred HHHHHHHHCCCEEEEEECCCC----------------EEecCCCcEEeccCChhHCCHhhCCEEEECCCcCHHHhccCHH
Confidence 589999999999999999875 5788999999999999998767899999999988766778999
Q ss_pred HHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHHH
Q 029299 82 VIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEF 161 (195)
Q Consensus 82 l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~~ 161 (195)
+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++.+..+.+. .++.|||+|||+|+.++.+|
T Consensus 84 l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~~~~~~~~----~~v~dg~iiT~~g~~~~~d~ 159 (168)
T 3l18_A 84 AVMITRRMFEDDKPVASICHGPQILISAKVLKGRRGTSTITIRDDVINAGAEWIDA----EVVVDGNWVSSRHPGDLYAW 159 (168)
T ss_dssp HHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCS----SCEEETTEEEECSGGGHHHH
T ss_pred HHHHHHHHHHCCCEEEEECHhHHHHHHCCccCCCEEEeCccHHHHHHhCCCEEecC----CEEEeCCEEEcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987777554 48999999999999999999
Q ss_pred HHHHHHHH
Q 029299 162 IRLFLKAL 169 (195)
Q Consensus 162 ~l~li~~l 169 (195)
++++|+++
T Consensus 160 ~l~li~~l 167 (168)
T 3l18_A 160 MREFVKLL 167 (168)
T ss_dssp HHHHGGGC
T ss_pred HHHHHHhh
Confidence 99999875
No 4
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.9e-35 Score=238.41 Aligned_cols=166 Identities=23% Similarity=0.259 Sum_probs=147.8
Q ss_pred chhHHH-HhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCC-ChhhhccC
Q 029299 2 VPFQAL-LAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGR-APEYLAMN 79 (195)
Q Consensus 2 ~p~~~l-~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~l~~~ 79 (195)
.|++.| ++.|++|+++|++++ +|++++|+.+.++..+++++ .+||+||||||. ++..+..+
T Consensus 41 ~p~dvl~~~~~~~v~~vs~~~~----------------~V~~~~G~~i~~d~~l~~~~-~~yD~liVPGG~~g~~~l~~~ 103 (253)
T 3ewn_A 41 GPHCMFGSLMGAKIYIVAKSLD----------------PVTSDAGLAIVPTATFGTCP-RDLTVLFAPGGTDGTLAAASD 103 (253)
T ss_dssp HHHHHHTTSTTCEEEEEESSSS----------------CEECTTSCEECCSEETTTSC-SSCSEEEECCBSHHHHHHTTC
T ss_pred HHHHHHHhCCCCEEEEEeCCCC----------------eEEcCCCCEEeCCcCHHHcC-CCCCEEEECCCccchhhhccC
Confidence 589999 678999999999875 47788999999999999885 489999999998 77667789
Q ss_pred hHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHH
Q 029299 80 DSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHP 159 (195)
Q Consensus 80 ~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~ 159 (195)
+.+++||+++++++++|++||+|+++|+++|||+||++|+||...+.++++|..+++. .+|+|||+|||+|+.+++
T Consensus 104 ~~l~~~Lr~~~~~gk~IaaICtG~~lLa~AGLL~Gr~aTthw~~~~~l~~~~~~~~~~----~vV~Dg~iiTs~G~~a~i 179 (253)
T 3ewn_A 104 AETLAFMADRGARAKYITSVCSGSLILGAAGLLKGYKATSHWSCRDALAGFGAIPTEA----RVVRDRNRITGAGVTAGL 179 (253)
T ss_dssp HHHHHHHHHHHTTCSEEEEETTHHHHHHHTTCCTTCEECCCTTTGGGGGGGTCEECCS----SEEEETTEEEECSTTHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEChHHHHHHHcCCCCCCEEecCHHHHHHHHhCCCeeeCC----cEEEECCEEECCCHHHHH
Confidence 9999999999999999999999999999999999999999999999998888887654 499999999999999999
Q ss_pred HHHHHHHHHHcCcc-ccc-ccceeeeccCcc
Q 029299 160 EFIRLFLKALGGTI-TGS-DKRILFLCGVSF 188 (195)
Q Consensus 160 ~~~l~li~~l~~~~-a~~-~~~~~~~~~~~~ 188 (195)
||+++||+++.++. |.+ ++.++|..+-+|
T Consensus 180 dlaL~lv~~l~G~~~A~~va~~l~~~~~~pf 210 (253)
T 3ewn_A 180 DFGLSMVAELRDQTYAECAQLMSEYDPDPPF 210 (253)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHTTCCCCCSS
T ss_pred HHHHHHHHHHcCHHHHHHHHHhcccCCCCCC
Confidence 99999999988876 555 777777765443
No 5
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=100.00 E-value=1.8e-35 Score=228.92 Aligned_cols=162 Identities=27% Similarity=0.422 Sum_probs=140.7
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCC-ChhhhccCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGR-APEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~l~~~~ 80 (195)
.|++.|+++|++++++|++++ +++++++|.++.++..+++++..+||+||||||. +...+..++
T Consensus 23 ~~~~~l~~ag~~v~~~s~~~~---------------~~v~~~~g~~i~~d~~l~~~~~~~~D~livpGG~~~~~~~~~~~ 87 (190)
T 4e08_A 23 IAADVLRRAGIKVTVAGLNGG---------------EAVKCSRDVQILPDTSLAQVASDKFDVVVLPGGLGGSNAMGESS 87 (190)
T ss_dssp HHHHHHHHTTCEEEEEESSSS---------------SCEECTTSCEEECSEETGGGTTCCCSEEEECCCHHHHHHHHHCH
T ss_pred HHHHHHHHCCCEEEEEECCCC---------------cceecCCCcEEECCCCHHHCCcccCCEEEECCCChHHHHhhhCH
Confidence 589999999999999999862 1477889999999999999877789999999995 455567899
Q ss_pred HHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHH
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPE 160 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~ 160 (195)
.+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++ +..+++.. .+++|||+|||+|+.+++|
T Consensus 88 ~~~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~-~~~~~~~~---~~v~dg~iiTs~g~~a~~d 163 (190)
T 4e08_A 88 LVGDLLRSQESGGGLIAAICAAPTVLAKHGVASGKSLTSYPSMKPQLVN-NYSYVDDK---TVVKDGNLITSRGPGTAYE 163 (190)
T ss_dssp HHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGGGGSSS-SSEECSSC---SEEEETTEEEECSGGGHHH
T ss_pred HHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCeEEeCcCHHHHHhc-CCcccCCC---cEEEECCEEECCChHHHHH
Confidence 9999999999999999999999999999999999999999998887766 44555422 4999999999999999999
Q ss_pred HHHHHHHHHcCcc-ccc-ccceee
Q 029299 161 FIRLFLKALGGTI-TGS-DKRILF 182 (195)
Q Consensus 161 ~~l~li~~l~~~~-a~~-~~~~~~ 182 (195)
|++++|+++.++. |.+ ++.++|
T Consensus 164 ~al~li~~~~g~~~a~~va~~l~~ 187 (190)
T 4e08_A 164 FALKIAEELAGKEKVQEVAKGLLV 187 (190)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCHHHHHHHHHhhCc
Confidence 9999999888875 555 555554
No 6
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=100.00 E-value=7.7e-35 Score=229.23 Aligned_cols=172 Identities=18% Similarity=0.180 Sum_probs=148.1
Q ss_pred chhHHHH--------hCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCCh
Q 029299 2 VPFQALL--------AFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAP 73 (195)
Q Consensus 2 ~p~~~l~--------~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~ 73 (195)
.|++.|+ ++|++|+++|++++ +|++++|.++.+|..+++++..+||+||||||.+.
T Consensus 23 ~~~~~l~~a~~~~~~~~~~~v~~vs~~~~----------------~v~~~~G~~i~~d~~~~~~~~~~~D~livpGG~~~ 86 (212)
T 3efe_A 23 YLIAELNSGRYFKKDLAPLKVITVGANKE----------------MITTMGGLRIKPDISLDECTLESKDLLILPGGTTW 86 (212)
T ss_dssp HHHHHHHHCTTSCTTCCCCCEEEEESSSC----------------CEECTTCCEECCSEEGGGCCCCTTCEEEECCCSCT
T ss_pred HHHHHHHhhhccccCCCCeEEEEEECCCC----------------eEEcCCCCEEecCcCHHHCCccCCCEEEECCCCcc
Confidence 5889999 88999999999875 47888999999999999987779999999999876
Q ss_pred hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCC-CchHHHHH-CCC--eeecCCCcceEEEcCCe
Q 029299 74 EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYP-PVKPVLIA-AGA--SWIEPETMAACVVDGNI 149 (195)
Q Consensus 74 ~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~-~~~~~l~~-~g~--~~~~~~~~~~~v~Dg~i 149 (195)
. +..++.+.+||+++++++|+|++||+|+++|+++|||+||++|+|| ...+.+++ ++. .+.+. .+|+|||+
T Consensus 87 ~-~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~aGlL~Gr~~Tt~~~~~~~~l~~~~p~~~~~~~~----~~V~Dg~i 161 (212)
T 3efe_A 87 S-EEIHQPILERIGQALKIGTIVAAICGATDALANMGYLDTRKHTSNNLEYTKMVCPNYKGEKFYELG----PAVSDANL 161 (212)
T ss_dssp T-SGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHTTTTSSSCBCCSCHHHHHHHCTTCCCTTTBCCC----SEEEETTE
T ss_pred c-cccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHcCCCCCCeeecCCHHHHHHHHhhCCCccccCCC----cEEEECCE
Confidence 4 4678999999999999999999999999999999999999999997 66667755 332 33443 49999999
Q ss_pred EeCCCCCCHHHHHHHHHHHHcCccccc--ccceeeeccCccccccccC
Q 029299 150 ITGATYEGHPEFIRLFLKALGGTITGS--DKRILFLCGVSFCFQNLLE 195 (195)
Q Consensus 150 iT~~g~~~~~~~~l~li~~l~~~~a~~--~~~~~~~~~~~~~~~~~~~ 195 (195)
|||+|+. ++||++++|+++.++.+.+ ....+|..|....|-++|+
T Consensus 162 iTs~G~~-~~d~al~li~~l~g~~a~~va~~~~~~~~g~~~~~~~~~~ 208 (212)
T 3efe_A 162 VTASGIA-PLEFAMEVLKKIDVFTLDALHSWYNLNKTHKPEYFFQLMN 208 (212)
T ss_dssp EEECTTC-HHHHHHHHHHHHTCSCHHHHHHHHHHHHHCCTHHHHHHHT
T ss_pred EECCCch-HHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCHHHHHHHHh
Confidence 9999985 9999999999999987666 5667778888888877764
No 7
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=100.00 E-value=1e-34 Score=224.33 Aligned_cols=155 Identities=27% Similarity=0.563 Sum_probs=136.6
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCcccccc-----ccCcceeeccCCCCCCCCCcCEEEEcCCC-Chhh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSE-----TRGHNFALNATFDEIDPTKYDGLVIPGGR-APEY 75 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~-----~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~ 75 (195)
.|++.|+++|++++++|+++++ +.+ +.|..+.++..+++++..+||+||||||. ++..
T Consensus 27 ~~~~~l~~ag~~v~~vs~~~~~----------------v~~~~~~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~~~ 90 (190)
T 2vrn_A 27 SPRAAIEAAGGTTELISLEPGE----------------IQSMKGDIEPQEKYRVDHVVSEVQVSDYDGLLLPGGTVNPDK 90 (190)
T ss_dssp HHHHHHHHTTCEEEEEESSSSE----------------EEEEETTTEEEEEEECSEEGGGCCGGGCSEEEECCCTHHHHH
T ss_pred HHHHHHHHCCCEEEEEecCCCc----------------cccccccccCCcEEeCCCChhhCChhhCCEEEECCCchhHHH
Confidence 5899999999999999998753 444 67889999999998866789999999997 5555
Q ss_pred hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCC
Q 029299 76 LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATY 155 (195)
Q Consensus 76 l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~ 155 (195)
+..++.+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++.+..+.+.. +++|||+|||+|+
T Consensus 91 ~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~gr~~Tt~~~~~~~l~~~~~~~~~~~----~v~Dg~iiTs~g~ 166 (190)
T 2vrn_A 91 LRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSETGIAQGLKMTSWSSLKRELTLAGAQWVDEE----CVTDKGVVTSRKP 166 (190)
T ss_dssp HTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCS----CEEETTEEECSSG
T ss_pred HhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhCcccCCcEEecCccHHHHHHHcCCeEECCC----EEEcCCEEEcCCh
Confidence 678999999999999999999999999999999999999999999999999999888887765 5679999999999
Q ss_pred CCHHHHHHHHHHHH-cCccccc
Q 029299 156 EGHPEFIRLFLKAL-GGTITGS 176 (195)
Q Consensus 156 ~~~~~~~l~li~~l-~~~~a~~ 176 (195)
.++.+|++++|+++ .++.+++
T Consensus 167 ~s~~~~~l~li~~l~~g~~~a~ 188 (190)
T 2vrn_A 167 DDLPAFNKKIVEEFAEGDHSSR 188 (190)
T ss_dssp GGHHHHHHHHHHHHHHCCCGGG
T ss_pred hhHHHHHHHHHHHHhccccccc
Confidence 99999999999988 6665443
No 8
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=100.00 E-value=1e-34 Score=225.83 Aligned_cols=162 Identities=23% Similarity=0.356 Sum_probs=139.8
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCC-CCCCcCEEEEcCCCC-hhhhccC
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEI-DPTKYDGLVIPGGRA-PEYLAMN 79 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~-~~~~~D~livpGG~~-~~~l~~~ 79 (195)
.|++.|+++|++++++|++++ +++.+++|.++.++.+++++ +..+||+||||||.+ +..+..+
T Consensus 21 ~~~~~l~~ag~~v~~vs~~~~---------------~~v~~~~g~~v~~d~~l~~~~~~~~~D~livpGG~~~~~~l~~~ 85 (197)
T 2rk3_A 21 IPVDVMRRAGIKVTVAGLAGK---------------DPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSES 85 (197)
T ss_dssp HHHHHHHHTTCEEEEEETTCS---------------SCEECTTSCEECCSEEHHHHHTTCCCSEEEECCCHHHHHHHHHC
T ss_pred HHHHHHHHCCCEEEEEEcCCC---------------CccccCCCCEEeCCcCHHHcCCccCCCEEEECCCchhHHHhhhC
Confidence 589999999999999999864 14778899999999999887 668999999999974 5556789
Q ss_pred hHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHC-CCeeecCCCcceEEEcCCeEeCCCCCCH
Q 029299 80 DSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAA-GASWIEPETMAACVVDGNIITGATYEGH 158 (195)
Q Consensus 80 ~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~-g~~~~~~~~~~~~v~Dg~iiT~~g~~~~ 158 (195)
+.+.+||+++++++|+|++||+|+++|+++|+|+||++|+||...+.+++. +..+.+. .+++|||+|||+|+.++
T Consensus 86 ~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGll~G~~~T~~~~~~~~l~~~~~~~~~~~----~~v~Dg~iiTs~g~~a~ 161 (197)
T 2rk3_A 86 AAVKEILKEQENRKGLIATICAGPTALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSEN----RVEKDGLILTSRGPGTS 161 (197)
T ss_dssp HHHHHHHHHHHHTTCEEEEETTTHHHHHHTTCSTTCEECCCGGGHHHHTTTSCSEECCC----SEEEETTEEEECSGGGH
T ss_pred HHHHHHHHHHHHcCCEEEEECHHHHHHHHCCCCCCCEEEeCCcHHHHHhhcCCceeCCC----CEEEeCCEEECCCHHHH
Confidence 999999999999999999999999999999999999999999999999864 3344333 49999999999999999
Q ss_pred HHHHHHHHHHHcCcc-ccc-ccceee
Q 029299 159 PEFIRLFLKALGGTI-TGS-DKRILF 182 (195)
Q Consensus 159 ~~~~l~li~~l~~~~-a~~-~~~~~~ 182 (195)
+||++++|+++.++. |.+ ++.++|
T Consensus 162 ~d~al~li~~l~g~~~a~~va~~~~~ 187 (197)
T 2rk3_A 162 FEFALAIVEALNGKEVAAQVKAPLVL 187 (197)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHGGGTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 999999999988875 444 444443
No 9
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=100.00 E-value=8e-35 Score=226.27 Aligned_cols=163 Identities=21% Similarity=0.348 Sum_probs=141.0
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCC-----CCcCEEEEcCCC-Chhh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDP-----TKYDGLVIPGGR-APEY 75 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~-----~~~D~livpGG~-~~~~ 75 (195)
.||+.|+++|++|+++++...+. ..++++.|.++.+|..+++++. .+||+||||||. ++..
T Consensus 22 ~p~~vl~~ag~~v~~~s~~~~~~-------------~~v~~~~g~~v~~d~~~~~~~~~d~~~~~yD~lvvPGG~~~~~~ 88 (194)
T 4gdh_A 22 APWGIFKRAEIPIDSVYVGENKD-------------RLVKMSRDVEMYANRSYKEIPSADDFAKQYDIAIIPGGGLGAKT 88 (194)
T ss_dssp HHHHHHHHTTCCEEEEEESSCTT-------------CEEECTTSCEEECSEEGGGSCCHHHHHHHCSEEEECCCHHHHHH
T ss_pred HHHHHHHHCCCeEEEEEEcCCCC-------------ceEecCCCceeeccccHhhCCccccccccCCEEEECCCchhHhH
Confidence 69999999999999999865321 2578889999999999988753 359999999996 4667
Q ss_pred hccChHHHHHHHHHHhC-CCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCC
Q 029299 76 LAMNDSVIDLVRKFSNS-GKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGAT 154 (195)
Q Consensus 76 l~~~~~l~~~l~~~~~~-~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g 154 (195)
+..++.+.+||++++++ +|++++||+|+ +|+++|+|+||++|+||...+.+++.+..|++.. +|+|||+||++|
T Consensus 89 l~~~~~l~~~l~~~~~~~~k~iaaiC~g~-~l~~aglL~gr~~T~~~~~~~~l~~~g~~~~d~~----vV~Dg~iiTs~g 163 (194)
T 4gdh_A 89 LSTTPFVQQVVKEFYKKPNKWIGMICAGT-LTAKTSGLPNKQITGHPSVRGQLEEGGYKYLDQP----VVLEENLITSQG 163 (194)
T ss_dssp HHTCHHHHHHHHHHTTCTTCEEEEEGGGG-HHHHHTTCCCSEECCCGGGHHHHHHTTCEECCSS----EEEETTEEEECS
T ss_pred hhhCHHHHHHHHHhhhcCCceEEeecccc-cchhhceecCCceEecCcHHHHHHhcCCeeecce----EEEcCCEEECCC
Confidence 88899999999999875 79999999998 5677888999999999999999999999998765 899999999999
Q ss_pred CCCHHHHHHHHHHHHcCcc-ccc-ccceee
Q 029299 155 YEGHPEFIRLFLKALGGTI-TGS-DKRILF 182 (195)
Q Consensus 155 ~~~~~~~~l~li~~l~~~~-a~~-~~~~~~ 182 (195)
++++++|++++|+++.++. |.+ ++.++|
T Consensus 164 ~~~~~d~al~lve~l~G~~~a~~va~~l~~ 193 (194)
T 4gdh_A 164 PGTAMLFGLKLLEQVASKDKYNAVYKSLSM 193 (194)
T ss_dssp GGGHHHHHHHHHHHHSCHHHHHHHHHHTTC
T ss_pred HhHHHHHHHHHHHHHcCHHHHHHHHhhccC
Confidence 9999999999999999886 444 555554
No 10
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=3.1e-34 Score=225.68 Aligned_cols=161 Identities=17% Similarity=0.273 Sum_probs=141.4
Q ss_pred chhHHHHhC--CCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccC
Q 029299 2 VPFQALLAF--GVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMN 79 (195)
Q Consensus 2 ~p~~~l~~~--G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~ 79 (195)
.|++.|+++ +++|+++|++++ +|++++|.++.++..++++ ++||+||||||.++..+..+
T Consensus 22 ~~~~~l~~a~~~~~v~~vs~~~~----------------~V~~~~G~~v~~d~~~~~~--~~~D~livpGG~~~~~~~~~ 83 (211)
T 3mgk_A 22 GPVEIFGNLQDDFELNFISSDGG----------------LVESSQKVRVETSLYTRDE--NIEKILFVPGGSGTREKVND 83 (211)
T ss_dssp HHHHHHTTCTTTEEEEEECSSCE----------------EEECTTCCEEEEBCCCCCS--SSEEEEEECCSTHHHHHTTC
T ss_pred HHHHHHHhCCCceEEEEEECCCC----------------eEecCCCcEEEeccchhhC--CCCCEEEECCCcchhhhcCC
Confidence 589999998 599999999865 5888999999999999886 46999999999887767789
Q ss_pred hHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHC-C-CeeecCCCcceEEEcCCeEeCCCCCC
Q 029299 80 DSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAA-G-ASWIEPETMAACVVDGNIITGATYEG 157 (195)
Q Consensus 80 ~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~-g-~~~~~~~~~~~~v~Dg~iiT~~g~~~ 157 (195)
+.+++||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++. + ..+.... .+++|||+|||+|+.+
T Consensus 84 ~~~~~~l~~~~~~~k~iaaiC~G~~~La~aGLL~Gr~~Tth~~~~~~l~~~~p~~~~~~~~---~~v~Dg~iiTs~G~~a 160 (211)
T 3mgk_A 84 DNFINFIGNMVKESKYIISVCTGSALLSKAGILNGKRATTNKRSFKWVTEQNEDVLWVKEA---RWVKDGNIYTSSGVSA 160 (211)
T ss_dssp HHHHHHHHHHHHHCSEEEECTTHHHHHHHTTTTTTSEECCCSTTHHHHHTTCTTSEECSSC---SEEEETTEEEECSHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEchHHHHHHhcCCcCCCeEeeChhHHHHHHHHCCCcEEecCC---eEEEeCCEEECCCHHH
Confidence 999999999999999999999999999999999999999999999999885 4 4444333 4999999999999999
Q ss_pred HHHHHHHHHHHHcCcc-ccc-ccceeee
Q 029299 158 HPEFIRLFLKALGGTI-TGS-DKRILFL 183 (195)
Q Consensus 158 ~~~~~l~li~~l~~~~-a~~-~~~~~~~ 183 (195)
++||++++|+++.++. |.+ ++.++|.
T Consensus 161 ~~dlal~lv~~~~G~~~A~~va~~l~~~ 188 (211)
T 3mgk_A 161 GIDMTLGFIEDLIGKEKALEISRSIEYF 188 (211)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHhcEEC
Confidence 9999999999888875 555 6666665
No 11
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=7.5e-34 Score=242.36 Aligned_cols=175 Identities=74% Similarity=1.248 Sum_probs=155.3
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChH
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS 81 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~ 81 (195)
.|++.|+++|++|+++||+++|.++...+..++.+.+.+.++.|..+.++.++++++..+||+||||||.++..+..++.
T Consensus 30 ~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~~~~~~~ 109 (396)
T 3uk7_A 30 VPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATFDEVDLSKYDGLVIPGGRAPEYLALTAS 109 (396)
T ss_dssp HHHHHHHHTTCEEEEECTTCCTTCEECEEEEECSSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBSHHHHHTTCHH
T ss_pred HHHHHHHHCCCEEEEEcCCCcCCCcccccccccccchhhhhccCceeeccCChhhcCcccCCEEEECCCcchhhcccCHH
Confidence 58999999999999999998776654444433444457888999999999999998778999999999988766778999
Q ss_pred HHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHHH
Q 029299 82 VIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEF 161 (195)
Q Consensus 82 l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~~ 161 (195)
+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++.|..|++.+++..+++|||+|||+|+.++++|
T Consensus 110 ~~~~l~~~~~~~~~i~aiC~G~~~La~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~d~ 189 (396)
T 3uk7_A 110 VVELVKEFSRSGKPIASICHGQLILAAADTVNGRKCTAYATVGPSLVAAGAKWVEPITPDVCVVDGSLITAATYEGHPEF 189 (396)
T ss_dssp HHHHHHHHHHTTCCEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSGGGHHHH
T ss_pred HHHHHHHHHHcCCEEEEECchHHHHHhccccCCCEeecCcchHHHHHHCCCEEECCCCCcceEecCCEEEecCcccHHHH
Confidence 99999999999999999999999999999999999999999999999988899887655569999999999999999999
Q ss_pred HHHHHHHHcCccccc
Q 029299 162 IRLFLKALGGTITGS 176 (195)
Q Consensus 162 ~l~li~~l~~~~a~~ 176 (195)
++++|+++.++....
T Consensus 190 al~li~~l~g~~~~~ 204 (396)
T 3uk7_A 190 IQLFVKALGGKITGA 204 (396)
T ss_dssp HHHHHHHTTCEEECC
T ss_pred HHHHHHHHhccchhc
Confidence 999999999976444
No 12
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=6e-34 Score=221.04 Aligned_cols=150 Identities=34% Similarity=0.614 Sum_probs=136.4
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCc-ceeeccCCCCCCCCCcCEEEEcCCCChhhhccCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGH-NFALNATFDEIDPTKYDGLVIPGGRAPEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~ 80 (195)
.|++.|+++|++++++++.+++ ++.+++|. .+.++..+++++..+||+||||||.++..+..++
T Consensus 41 ~~~~~l~~ag~~v~~vs~~~~~---------------~v~~~~g~~~v~~~~~l~~~~~~~~D~livpGG~~~~~l~~~~ 105 (193)
T 1oi4_A 41 SPADEFRKAGHEVITIEKQAGK---------------TVKGKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDN 105 (193)
T ss_dssp HHHHHHHHTTCEEEEEESSTTC---------------EEECTTSSCEEECCEEGGGCCGGGCSEEEECCBTHHHHHTTSH
T ss_pred HHHHHHHHCCCEEEEEECCCCc---------------ceecCCCCeEEECCCChHHCCcccCCEEEECCCcCHHHhhhCH
Confidence 4899999999999999998652 27778888 9999999998766789999999998776666789
Q ss_pred HHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCC-eEeCCCCCCHH
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGN-IITGATYEGHP 159 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~-iiT~~g~~~~~ 159 (195)
.+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++.+..+.+.. +++||| +|||+|+.+++
T Consensus 106 ~l~~~l~~~~~~gk~i~aIC~G~~lLa~aGLL~Gr~~Tth~~~~~~l~~~~~~~~~~~----~v~Dg~~iiTs~g~~~~~ 181 (193)
T 1oi4_A 106 RFVTFTRDFVNSGKPVFAICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQE----VVVDKDQLVTSRTPDDLP 181 (193)
T ss_dssp HHHHHHHHHHHTTCCEEEETTTHHHHHHHTCCTTCEECCCGGGHHHHHHTTCEECCSS----CEEETTTEEEESSGGGHH
T ss_pred HHHHHHHHHHHcCCEEEEECHHHHHHHHCCccCCCEEEeChhHHHHHHHcCCEEecCC----EEEECCEEEECCCcchHH
Confidence 9999999999999999999999999999999999999999999999998888887764 788999 99999999999
Q ss_pred HHHHHHHHHHc
Q 029299 160 EFIRLFLKALG 170 (195)
Q Consensus 160 ~~~l~li~~l~ 170 (195)
||++++|+++.
T Consensus 182 d~~l~li~~l~ 192 (193)
T 1oi4_A 182 AFNREALRLLG 192 (193)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 13
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=100.00 E-value=1.4e-34 Score=226.13 Aligned_cols=160 Identities=16% Similarity=0.251 Sum_probs=137.3
Q ss_pred chhHHHHhCC------CeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhh
Q 029299 2 VPFQALLAFG------VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEY 75 (195)
Q Consensus 2 ~p~~~l~~~G------~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~ 75 (195)
.|++.|++++ |+|+++|++++ ++++++|+++.++ ++++++..+||+||||||.+...
T Consensus 23 ~~~dvl~~a~~~~~~~~~v~~vs~~~~----------------~v~~~~G~~i~~d-~l~~~~~~~~D~livpGG~~~~~ 85 (202)
T 3gra_A 23 VAMDVLVTANLLRADSFQFTPLSLDGD----------------RVLSDLGLELVAT-ELSAAALKELDLLVVCGGLRTPL 85 (202)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEESSSS----------------EEEBTTSCEEECE-ECCSGGGTTCSEEEEECCTTCCS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEECCCC----------------ceEcCCCCEEECC-CcccccCCCCCEEEEeCCCchhh
Confidence 4889999876 99999999864 5888999999999 99987668999999999987654
Q ss_pred hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHH-CCCeeecCCCcceEEEcCCeEeCCC
Q 029299 76 LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGASWIEPETMAACVVDGNIITGAT 154 (195)
Q Consensus 76 l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~-~g~~~~~~~~~~~~v~Dg~iiT~~g 154 (195)
. . +.+.+||+++++++++|++||+|+++|+++|||+||++|+||...+.+++ +|...+..+ .+++|||+|||+|
T Consensus 86 ~-~-~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~---~~v~dg~iiTs~G 160 (202)
T 3gra_A 86 K-Y-PELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPA---SFTLDRDRLSAAS 160 (202)
T ss_dssp C-C-TTHHHHHHHHHHHTCEEEEETTHHHHHHHHTCCTTEEECCCGGGHHHHHHHCTTEEECSS---SEEEETTEEEESS
T ss_pred c-c-HHHHHHHHHHHhhCCEEEEECHHHHHHHHcCCcCCCcEEeChhHHHHHHHHCCCCEecCC---eEEEeCCEEECCC
Confidence 3 4 89999999999999999999999999999999999999999999999987 455444433 4999999999999
Q ss_pred CCCHHHHHHHHHHHHcCcc-ccc-ccceeee
Q 029299 155 YEGHPEFIRLFLKALGGTI-TGS-DKRILFL 183 (195)
Q Consensus 155 ~~~~~~~~l~li~~l~~~~-a~~-~~~~~~~ 183 (195)
+.+++||++++|+++.++. |.+ ++.++|.
T Consensus 161 ~~a~~dlal~li~~~~G~~~A~~va~~l~~~ 191 (202)
T 3gra_A 161 PNGAMELMLGLVRRLYGDGLAEGVEEILSFS 191 (202)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHhCcC
Confidence 9999999999999887775 555 5555553
No 14
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=100.00 E-value=6e-34 Score=223.68 Aligned_cols=160 Identities=13% Similarity=0.173 Sum_probs=137.9
Q ss_pred chhHHHHhCC-------CeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChh
Q 029299 2 VPFQALLAFG-------VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPE 74 (195)
Q Consensus 2 ~p~~~l~~~G-------~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~ 74 (195)
.|++.|++++ |+|.++|++++ +|++++|+++.++..++++ ++||+||||||.++.
T Consensus 26 ~~~d~l~~a~~~~~~~~~~v~~vs~~~~----------------~v~~~~G~~v~~d~~~~~~--~~~D~livpGg~~~~ 87 (209)
T 3er6_A 26 SSLEILETAAEFAEFQGFMTHVVTPNNR----------------PLIGRGGISVQPTAQWQSF--DFTNILIIGSIGDPL 87 (209)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEEECTTSS----------------CEEETTTEEEECSSCGGGC--SCCSEEEECCCSCHH
T ss_pred HHHHHHHHHHhhcCCCCcEEEEEeCCCC----------------ceecCCCeEEeCCcCcccc--CCCCEEEECCCCCch
Confidence 4888998874 99999999865 4888999999999999886 589999999998764
Q ss_pred h--hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHH-CCC-eeecCCCcceEEEcCCeE
Q 029299 75 Y--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGA-SWIEPETMAACVVDGNII 150 (195)
Q Consensus 75 ~--l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~-~g~-~~~~~~~~~~~v~Dg~ii 150 (195)
. +..++.+++||+++++++++|++||+|+++||++|||+||++|+||...+.+++ +|. .+.... .+++|||+|
T Consensus 88 ~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~aGLL~gr~aTth~~~~~~l~~~~p~~~~~~~~---~~v~Dg~ii 164 (209)
T 3er6_A 88 ESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKAGLLQQNKAVMHSYFAHLFGELFPEIMLMTEQ---KALIDGNVY 164 (209)
T ss_dssp HHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHTCCSSCEECCCHHHHHHHHHHCTTSEECTTC---SEEEETTEE
T ss_pred hhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHcCCCCCCeeEECHHHHHHHHHHCCCcEEecCC---EEEEeCCEE
Confidence 4 357999999999999999999999999999999999999999999999999987 454 444332 499999999
Q ss_pred eCCCCCCHHHHHHHHHHHHcCcc-ccc-ccceee
Q 029299 151 TGATYEGHPEFIRLFLKALGGTI-TGS-DKRILF 182 (195)
Q Consensus 151 T~~g~~~~~~~~l~li~~l~~~~-a~~-~~~~~~ 182 (195)
||+|+.+++||++++|+++.++. |.+ ++.++|
T Consensus 165 Ts~G~~a~~dlal~li~~~~G~~~A~~va~~l~~ 198 (209)
T 3er6_A 165 LSSGPYSHSSVMLEIVEEYFGKHTRNLGNQFLST 198 (209)
T ss_dssp EECCSSCCHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred ECCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhcc
Confidence 99999999999999999888775 555 555554
No 15
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=100.00 E-value=1.2e-34 Score=227.50 Aligned_cols=164 Identities=20% Similarity=0.319 Sum_probs=139.5
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCC-hhhhccCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRA-PEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~-~~~l~~~~ 80 (195)
.|++.|+++|++|+++|+++. .++++++|..+.++..+++++..+||+||||||.+ +..+..++
T Consensus 27 ~~~~~l~~ag~~v~~vs~~g~---------------~~v~~~~G~~v~~d~~l~~~~~~~~D~livpGG~~~~~~l~~~~ 91 (208)
T 3ot1_A 27 IIVDTLVRAGFQVTMAAVGDK---------------LQVQGSRGVWLTAEQTLEACSAEAFDALALPGGVGGAQAFADST 91 (208)
T ss_dssp HHHHHHHHTTCEEEEEESSSC---------------SEEECTTSCEEECSEEGGGCCGGGCSEEEECCCHHHHHHHHTCH
T ss_pred HHHHHHHHCCCEEEEEEcCCC---------------cceecCCCcEEeCCCCHHHCCCcCCCEEEECCCchHHHHHhhCH
Confidence 589999999999999999752 15788999999999999998777999999999974 55577899
Q ss_pred HHHHHHHHHHhCCCeEEEecHHH-HHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEE--cCCeEeCCCCCC
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQ-LILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVV--DGNIITGATYEG 157 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~-~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~--Dg~iiT~~g~~~ 157 (195)
.+.+||+++++++|+|++||+|+ ++|+++|||+||++|+||...+.+. ...|.+.. +++ |||+|||+|+.+
T Consensus 92 ~l~~~l~~~~~~gk~i~aiC~G~a~~La~aGlL~g~~~T~~~~~~~~l~--~~~~~~~~----vv~d~dg~iiTs~g~~a 165 (208)
T 3ot1_A 92 ALLALIDAFSQQGKLVAAICATPALVFAKQQKFVGARMTCHPNFFDHIP--SERLSRQR----VCYYATQHLLTSQGPGT 165 (208)
T ss_dssp HHHHHHHHHHHTTCEEEEETTHHHHTTTTTTCSTTCCBCCCGGGGGGSC--TTTBCCSS----EEEEGGGTEEEECSGGG
T ss_pred HHHHHHHHHHHcCCEEEEEChhHHHHHHHCCccCCCEEEECccHHHHcc--CCccccCc----EEEeCCCCEEECCCHHH
Confidence 99999999999999999999999 9999999999999999999877652 24444433 666 559999999999
Q ss_pred HHHHHHHHHHHHcCcc-ccc-ccceeeeccC
Q 029299 158 HPEFIRLFLKALGGTI-TGS-DKRILFLCGV 186 (195)
Q Consensus 158 ~~~~~l~li~~l~~~~-a~~-~~~~~~~~~~ 186 (195)
++||++++|+++.++. +.+ ++.++|..+.
T Consensus 166 ~~d~al~lv~~l~G~~~a~~va~~l~~~~~~ 196 (208)
T 3ot1_A 166 ALEFALAMIALLAGVELAQHVAAPMVLHPQQ 196 (208)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHGGGTCCHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhheeCCCC
Confidence 9999999999888875 555 7777774443
No 16
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=1.9e-33 Score=236.64 Aligned_cols=154 Identities=29% Similarity=0.505 Sum_probs=141.1
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCc-ceeeccCCCCCCCCCcCEEEEcCCCChhhhccCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGH-NFALNATFDEIDPTKYDGLVIPGGRAPEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~ 80 (195)
.|++.|+++|++|+++|+++++ .|.+++|. .+.++..+++++..+||+||||||.++..+..++
T Consensus 28 ~p~dvL~~Ag~~v~vvS~~~g~---------------~V~ss~G~~~i~~d~~l~~v~~~~~DaLiVPGG~g~~~l~~~~ 92 (365)
T 3fse_A 28 IPCNGLKQAGFEVVVLGSRMNE---------------KYKGKRGRLSTQADGTTTEAIASEFDAVVIPGGMAPDKMRRNP 92 (365)
T ss_dssp HHHHHHHHTTCEEEEEESSSSC---------------CEECTTSCCEECCSEETTTCCGGGCSEEEECCBTHHHHHTTCH
T ss_pred HHHHHHHHCCCEEEEEECCCCc---------------eeecCCCceEEeCCCCHhhCCCcCCCEEEEECCcchhhccCCH
Confidence 5899999999999999998753 37788999 9999999999876789999999999877677899
Q ss_pred HHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHH
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPE 160 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~ 160 (195)
.+.+||+++++++++|++||+|+++|+++|||+||++|+||...+.|++.+..|.+. .+|+|||+|||+|+.++++
T Consensus 93 ~l~~~Lr~~~~~gk~IaAIC~G~~lLA~AGLLdGrraTthw~~~~~L~~~g~~~~d~----~vV~DGniITs~G~~a~~d 168 (365)
T 3fse_A 93 NTVRFVQEAMEQGKLVAAVCHGPQVLIEGDLLRGKQATGFIAISKDMMNAGADYLDE----ALVVDGNLITSREPGDLAI 168 (365)
T ss_dssp HHHHHHHHHHHTTCEEEEETTTHHHHHHTTCCTTCEECCCGGGHHHHHHTTCEECCS----SCEEETTEEEECSGGGHHH
T ss_pred HHHHHHHHHHHCCCEEEEECHHHHHHHHcCCcCCCEEEeChHHHHHHHhCCCEEecC----cEEEECCEEECCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999877887654 3899999999999999999
Q ss_pred HHHHHHHHHcCccc
Q 029299 161 FIRLFLKALGGTIT 174 (195)
Q Consensus 161 ~~l~li~~l~~~~a 174 (195)
|++++|+.+.+...
T Consensus 169 ~al~lIe~L~g~~~ 182 (365)
T 3fse_A 169 FTTAILSRLGYGGK 182 (365)
T ss_dssp HHHHHHHHTTCCCS
T ss_pred HHHHHHHHhcCchH
Confidence 99999999988753
No 17
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-33 Score=221.52 Aligned_cols=166 Identities=19% Similarity=0.190 Sum_probs=138.4
Q ss_pred chhHHHHhC-CCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccCh
Q 029299 2 VPFQALLAF-GVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~~-G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~ 80 (195)
.|++.|+++ |++|+++|+++ . +++++|.++.++.+++++ +.+||+||||||.++.. .++
T Consensus 21 ~~~~~l~~~~~~~v~~vs~~~----------------~-V~~~~G~~v~~d~~l~~~-~~~~D~livpGG~~~~~--~~~ 80 (206)
T 3f5d_A 21 YLASALNQREDWSVHTVSLDP----------------I-VSSIGGFKTSVDYIIGLE-PANFNLLVMIGGDSWSN--DNK 80 (206)
T ss_dssp HHHHHHHTSTTEEEEEEESSS----------------E-EEBTTSCEEECSEETTSS-CSCCSEEEECCBSCCCC--CCH
T ss_pred HHHHHHhccCCeEEEEEECCC----------------C-EEecCCcEEecCcChhhC-CcCCCEEEEcCCCChhh--cCH
Confidence 589999998 99999999985 3 667889999999999987 46899999999998764 899
Q ss_pred HHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHH----C-CCeeecCCCcceEEEcCCeEeCCCC
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA----A-GASWIEPETMAACVVDGNIITGATY 155 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~----~-g~~~~~~~~~~~~v~Dg~iiT~~g~ 155 (195)
.+.+||+++++++|+|++||+|+++|+++|||+||++|+||. +.+++ . +..+.+. .+++|||+|||+|+
T Consensus 81 ~l~~~l~~~~~~gk~iaaiC~G~~~La~aGLL~Gr~aTthw~--~~~~~~~~~~~~~~~~~~----~~V~Dg~iiTs~G~ 154 (206)
T 3f5d_A 81 KLLHFVKTAFQKNIPIAAICGAVDFLAKNGLLNNHSHTGNFV--YLWKDYKQYKPISSFVEK----QAVRDKNLVTANGT 154 (206)
T ss_dssp HHHHHHHHHHHTTCCEEEETHHHHHHHHTTTTTTSCBCCSCG--GGGTTCTTCCCSSCBCCS----SEEEETTEEEECTT
T ss_pred HHHHHHHHHHHcCCEEEEECHHHHHHHHcCCCCCCEEEccCH--HHhhhhHhhcCCCeEccC----CEEEECCEEECCCc
Confidence 999999999999999999999999999999999999999993 23332 2 4555543 49999999999998
Q ss_pred CCHHHHHHHHHHHHcCccccc-ccceee-eccCcccccccc
Q 029299 156 EGHPEFIRLFLKALGGTITGS-DKRILF-LCGVSFCFQNLL 194 (195)
Q Consensus 156 ~~~~~~~l~li~~l~~~~a~~-~~~~~~-~~~~~~~~~~~~ 194 (195)
. ++||++++|+.++.+.+.+ ++.++| ..|..++++.++
T Consensus 155 a-~id~al~li~~l~~~~a~~va~~~~~~~~g~~~~~~~~~ 194 (206)
T 3f5d_A 155 A-PIEFTNLILEMIDFDTPENIEKMMYMNRYGFYHFCDKYG 194 (206)
T ss_dssp C-HHHHHHHHHHHTTCSCHHHHHHHHHHHHHCHHHHHHHHC
T ss_pred h-HHHHHHHHHHHhCcchHHHHHHHhhhhhccchhhHHHhC
Confidence 5 9999999999998777777 444444 447766666543
No 18
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=100.00 E-value=7.8e-34 Score=222.33 Aligned_cols=164 Identities=21% Similarity=0.391 Sum_probs=138.4
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCC-hhhhccCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRA-PEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~-~~~l~~~~ 80 (195)
.|++.|+++|++++++|++++.. .++.+++|..+.++.++++++..+||+||||||.+ +..+..++
T Consensus 20 ~~~~~l~~ag~~v~~vs~~~~~~-------------~~v~~~~g~~v~~~~~l~~~~~~~~D~livpGG~~~~~~l~~~~ 86 (205)
T 2ab0_A 20 TTIDLLVRGGIKVTTASVASDGN-------------LAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDST 86 (205)
T ss_dssp HHHHHHHHTTCEEEEEECSSTTC-------------CEEECTTSCEEECSEEHHHHTTSCCSEEEECCCHHHHHHHHHCH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCC-------------ceeecCCCeEEecCCCHHHCCcccCCEEEECCCcccHHHhccCH
Confidence 58999999999999999986410 14778899999999999887778899999999974 55567799
Q ss_pred HHHHHHHHHHhCCCeEEEecHHH-HHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCe--EeCCCCCC
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQ-LILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNI--ITGATYEG 157 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~-~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~i--iT~~g~~~ 157 (195)
.+.+||+++++++|+|++||+|+ ++|+++|||+||++|+||...+.+.+ ..+.+. .+++|||+ |||+|+.+
T Consensus 87 ~l~~~l~~~~~~gk~i~aiC~G~~~lLa~aGlL~G~~~T~~~~~~~~~~~--~~~~~~----~vv~Dg~i~viTs~g~~s 160 (205)
T 2ab0_A 87 LLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPA--EQWLDK----RVVWDARVKLLTSQGPGT 160 (205)
T ss_dssp HHHHHHHHHHHTTCEEEEETHHHHHHTTTTTSSSSSCBCCCGGGGGGSCT--TTBCCC----SEEEETTTTEEEECSGGG
T ss_pred HHHHHHHHHHHcCCEEEEECHhHHHHHHHCCccCCCeEEeCccHHHHccC--CEEecC----CEEEeCCcCeEECcChhh
Confidence 99999999999999999999999 99999999999999999986654432 344443 38899999 99999999
Q ss_pred HHHHHHHHHHHHcCcc-ccc-ccceeeec
Q 029299 158 HPEFIRLFLKALGGTI-TGS-DKRILFLC 184 (195)
Q Consensus 158 ~~~~~l~li~~l~~~~-a~~-~~~~~~~~ 184 (195)
+++|++++|+++.+.. |.+ ++.++|..
T Consensus 161 ~~d~al~li~~l~g~~~a~~va~~l~~~~ 189 (205)
T 2ab0_A 161 AIDFGLKIIDLLVGREKAHEVASQLVMAA 189 (205)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTTCCT
T ss_pred HHHHHHHHHHHhcChHHHHHHHHhcccCC
Confidence 9999999999998876 455 66666654
No 19
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-32 Score=234.08 Aligned_cols=172 Identities=57% Similarity=1.062 Sum_probs=149.7
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChH
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS 81 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~ 81 (195)
.|++.|+++|++|+++||+++|+.....+..+..+.+.++++.|..+.++.++++++..+||+||||||.++..+..++.
T Consensus 223 ~~~~~l~~ag~~v~~vs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~D~livpGg~~~~~~~~~~~ 302 (396)
T 3uk7_A 223 VPFQSLQALGCQVDAVCPEKKAGDRCPTAIHDFEGDQTYSEKPGHTFALTTNFDDLVSSSYDALVIPGGRAPEYLALNEH 302 (396)
T ss_dssp HHHHHHHHHTCEEEEECTTCCTTCEECEEEEECCSSSSCEEEECCCEECCSCGGGCCGGGCSEEEECCBSHHHHHTTCHH
T ss_pred HHHHHHHHCCCEEEEECCCCCCCcccccccccccccchhhhcCCceeeccCCHHHCCcccCCEEEECCCcchhhhccCHH
Confidence 58999999999999999998764433333333344456888999999999999998778999999999988776778999
Q ss_pred HHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHHH
Q 029299 82 VIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEF 161 (195)
Q Consensus 82 l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~~ 161 (195)
+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.++..+..|++.++...+++|||+|||+|+.++.||
T Consensus 303 ~~~~l~~~~~~~~~i~aiC~g~~~La~aGlL~g~~~T~~~~~~~~~~~~~~~~~~~~~~~~~v~Dg~iiTs~g~~~~~d~ 382 (396)
T 3uk7_A 303 VLNIVKEFMNSEKPVASICHGQQILAAAGVLKGRKCTAYPAVKLNVVLGGGTWLEPDPIDRCFTDGNLVTGAAWPGHPEF 382 (396)
T ss_dssp HHHHHHHHHHTTCCEEEEGGGHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECCCSSTTCEEEETTEEEESSGGGHHHH
T ss_pred HHHHHHHHHHCCCEEEEEchHHHHHHHcCCcCCCEEecCccHHHHHHHCCCEEEcCCCceeEEEcCCEEECCCchhHHHH
Confidence 99999999999999999999999999999999999999999999998878888876421138999999999999999999
Q ss_pred HHHHHHHHcCcc
Q 029299 162 IRLFLKALGGTI 173 (195)
Q Consensus 162 ~l~li~~l~~~~ 173 (195)
++++|+++.++.
T Consensus 383 ~l~li~~l~~~~ 394 (396)
T 3uk7_A 383 VSQLMALLGIQV 394 (396)
T ss_dssp HHHHHHHHTCEE
T ss_pred HHHHHHHhcccc
Confidence 999999998764
No 20
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=99.98 E-value=6.3e-33 Score=222.55 Aligned_cols=172 Identities=19% Similarity=0.282 Sum_probs=134.1
Q ss_pred chhHHHHhCCCeEEEeCCCCCC-CCCCCcccc--CCCCccccc---cccCcceeeccCCCCCCCCCcCEEEEcCCCCh-h
Q 029299 2 VPFQALLAFGVSVDAACPGKKS-GDVCPTAVH--QSTGHQTYS---ETRGHNFALNATFDEIDPTKYDGLVIPGGRAP-E 74 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~-~~~~~~~~~--~~~~~~~v~---~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~-~ 74 (195)
+||++|+++|++|+++||+|++ .+..+.... ....++.+. .+.+.++.++.++++++..+||+||||||+++ .
T Consensus 33 ~p~~~l~~aG~~V~iaS~~g~~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~v~~~~yD~l~vpGG~~~~~ 112 (244)
T 3kkl_A 33 RSFDTFEKHGFEVDFVSETGGFGWDEHYLPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKVFFASAGHGALF 112 (244)
T ss_dssp HHHHHHHTTTCEEEEEESSSCCCBCTTC--------------------CHHHHHTCEEGGGCCGGGCSEEEECCSTTHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCCcCCccccccccCHHHHHHHHHhhHHHHHHhcCCCChHHCCHhhCCEEEEcCCCchhh
Confidence 6999999999999999998765 222111100 000011121 23457788999999998889999999999986 5
Q ss_pred hhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC-------CCCCCceEecCCCchH-------------------HHH
Q 029299 75 YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA-------DVVKGRKCTAYPPVKP-------------------VLI 128 (195)
Q Consensus 75 ~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a-------GlL~g~~~T~~~~~~~-------------------~l~ 128 (195)
.+..++.+.+||+++++++|+|++||+|+++|+++ |||+||++|+||...+ .++
T Consensus 113 ~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a~~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~~~l~ 192 (244)
T 3kkl_A 113 DYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILRSRKLTTVERVAN 192 (244)
T ss_dssp HGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCEECCSCHHHHHHHTTHHHHHHTTCCCHHHHHH
T ss_pred hcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhhccccCCceeCCceecCCCcHHHHhhhhhhhccccccccHHHHHH
Confidence 57889999999999999999999999999999999 9999999999998743 455
Q ss_pred HCCCeeecCC-C-cceEEEcCCeEeCCCCCCHHHHHHHHHHHHcCcc
Q 029299 129 AAGASWIEPE-T-MAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 173 (195)
Q Consensus 129 ~~g~~~~~~~-~-~~~~v~Dg~iiT~~g~~~~~~~~l~li~~l~~~~ 173 (195)
+.|+.|.+.. . ...+|+|||+||++|+.++.+|++++|+.+..-+
T Consensus 193 ~~Ga~~~~~~~~~~~~vV~Dg~lITg~gp~sa~~~a~~lv~~l~~~~ 239 (244)
T 3kkl_A 193 KNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINALYSVE 239 (244)
T ss_dssp TTTCEECCCSSTTSCCEEEETTEEEESSGGGHHHHHHHHHHHHTC--
T ss_pred HCCCEEecCCCCCCCCEEEeCCEEECCChHHHHHHHHHHHHHHhhhh
Confidence 5688988741 1 1359999999999999999999999999887643
No 21
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=99.97 E-value=3.5e-32 Score=210.05 Aligned_cols=152 Identities=24% Similarity=0.339 Sum_probs=130.6
Q ss_pred chhHHHHh-CCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccCh
Q 029299 2 VPFQALLA-FGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~-~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~ 80 (195)
.|++.|++ +|++|+++|++++ ++++++|..+.++.++++++..+||+||||||.+.. +..++
T Consensus 19 ~~~~~l~~a~~~~v~~vs~~~~----------------~v~~~~g~~v~~~~~~~~~~~~~~D~livpGG~~~~-~~~~~ 81 (188)
T 2fex_A 19 LLAAAARSYLGVEIVHATPDGM----------------PVTSMGGLKVTPDTSYDALDPVDIDALVIPGGLSWE-KGTAA 81 (188)
T ss_dssp HHHHHHHHHSCCEEEEEETTSS----------------CEECTTCCEEECSEEGGGCCTTTCSEEEECCBSHHH-HTCCC
T ss_pred HHHHHHhhcCCceEEEEeCCCC----------------ceeeCCCcEEeccccHHHCCcccCCEEEECCCCccc-ccccH
Confidence 58999999 9999999999875 377888999999999998876799999999998754 45788
Q ss_pred HHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHH-CCC--eeecCCCcce-EEEcCCeEeCCCCC
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIA-AGA--SWIEPETMAA-CVVDGNIITGATYE 156 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~-~g~--~~~~~~~~~~-~v~Dg~iiT~~g~~ 156 (195)
.+.+||+++++++|+|++||+|+++|+++|||+||++|+||.....+++ ++. .+.+. . +++|||+||++|+.
T Consensus 82 ~l~~~l~~~~~~~k~i~aiC~G~~~La~aGlL~gr~~T~~~~~~~~~~~~~~~~~~~~~~----~~~v~Dg~iiTs~g~~ 157 (188)
T 2fex_A 82 DLGGLVKRFRDRDRLVAGICAAASALGGTGVLNDVAHTGNALASHKAYPAYRGEAHYRDQ----PRAVSDGGVVTAAGSA 157 (188)
T ss_dssp CCHHHHHHHHHTTCEEEEETHHHHHHHHTTTTTTSCBCCSCHHHHHTSTTCCCGGGBCCC----SSCEEETTEEEECTTC
T ss_pred HHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCccccCCcHHHHhhhhhcCCccceecC----CCEEEECCEEECCCcc
Confidence 9999999999999999999999999999999999999999975555544 342 33333 4 89999999999985
Q ss_pred CHHHHHHHHHHHHcCcccc
Q 029299 157 GHPEFIRLFLKALGGTITG 175 (195)
Q Consensus 157 ~~~~~~l~li~~l~~~~a~ 175 (195)
++||++++|+++.+...+
T Consensus 158 -~~d~al~lv~~l~~~~~~ 175 (188)
T 2fex_A 158 -PVSFAVEILKSLGLFGPE 175 (188)
T ss_dssp -HHHHHHHHHHHTTCCSHH
T ss_pred -HHHHHHHHHHHccCCCHH
Confidence 999999999999887543
No 22
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=99.97 E-value=3.6e-32 Score=215.21 Aligned_cols=163 Identities=23% Similarity=0.408 Sum_probs=132.9
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccC-----cceeeccCCCCCCCCCcCEEEEcCCCChh-h
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRG-----HNFALNATFDEIDPTKYDGLVIPGGRAPE-Y 75 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g-----~~i~~~~~~~~~~~~~~D~livpGG~~~~-~ 75 (195)
.|++.|+++|++|+++|+++++......+..+ ...| .++.++..+++++..+||+||||||.+.. .
T Consensus 33 ~p~~~l~~ag~~v~~vs~~~~~v~~~~~~~~~--------~~~~~~~~~~~i~~~~~l~~~~~~~~D~livpGG~~~~~~ 104 (224)
T 1u9c_A 33 VPYLVFQEKGYDVKVASIQGGEVPLDPRSINE--------KDPSWAEAEAALKHTARLSKDDAHGFDAIFLPGGHGTMFD 104 (224)
T ss_dssp HHHHHHHHTTCEEEEEESSCBCCCBCGGGSSS--------CCGGGHHHHHHTTSBEECCGGGGSSCSEEEECCCTTHHHH
T ss_pred HHHHHHHHCCCeEEEECCCCCccccCcccccc--------HHHHHhhhhHhhcCCCChHHcChhhCCEEEECCCcchHHH
Confidence 59999999999999999988652211000000 0113 56888888888766789999999999864 4
Q ss_pred hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCC------CCCCceEecCCCchH---------------HHHHCCCee
Q 029299 76 LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD------VVKGRKCTAYPPVKP---------------VLIAAGASW 134 (195)
Q Consensus 76 l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aG------lL~g~~~T~~~~~~~---------------~l~~~g~~~ 134 (195)
+..++.+.+||+++++++|+|++||+|+++|+++| ||+||++|+||...+ .+++.+..|
T Consensus 105 l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~ag~~~g~~lL~Gr~~T~~~~~~~~~~~~~~~~p~~~~~~l~~~g~~~ 184 (224)
T 1u9c_A 105 FPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNATYKDGTPIVKGKTVTSFTDEEEREVGLDVHMPFLLESTLRLRGANF 184 (224)
T ss_dssp STTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTSCBTTTTCEECCSCHHHHHHHTCGGGSSSCHHHHHHHTTCEE
T ss_pred hhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHccccCCCceecCcEEecCCCHHHhhccccccCCccHHHHHHHcCCEE
Confidence 77899999999999999999999999999999999 999999999998655 466677788
Q ss_pred ecCCCc-ceEEEcCCeEeCCCCCCHHHHHHHHHHHHcCc
Q 029299 135 IEPETM-AACVVDGNIITGATYEGHPEFIRLFLKALGGT 172 (195)
Q Consensus 135 ~~~~~~-~~~v~Dg~iiT~~g~~~~~~~~l~li~~l~~~ 172 (195)
.+.+.+ ..+|+|||+|||+|+.++++|++++|+++.++
T Consensus 185 ~~~~~~~~~vv~Dg~liTs~g~~s~~d~al~lv~~l~g~ 223 (224)
T 1u9c_A 185 VRGGKWTDFSVRDGNLITGQNPQSSRSTAEKVVAALEER 223 (224)
T ss_dssp CCCSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHTT
T ss_pred ecCCCCCccEEEeCCEEECCChhhHHHHHHHHHHHHhcc
Confidence 765411 25999999999999999999999999988764
No 23
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=2.6e-32 Score=208.33 Aligned_cols=145 Identities=19% Similarity=0.369 Sum_probs=126.8
Q ss_pred hHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCC--CCCCcCEEEEcCC--C-Chhhhc-
Q 029299 4 FQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEI--DPTKYDGLVIPGG--R-APEYLA- 77 (195)
Q Consensus 4 ~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~--~~~~~D~livpGG--~-~~~~l~- 77 (195)
++.+.++|++|+++|++++ +++++++|..+.++..++++ +..+||+|||||| . ++..+.
T Consensus 22 ~e~~~~~~~~v~~vs~~~~---------------~~v~~~~g~~v~~d~~~~~~~~~~~~~D~livpGG~~~~~~~~l~~ 86 (175)
T 3cne_A 22 LEAFFENGISYKVFAVSDT---------------KEIKTNSGMVLIVDDVIANLKGHEDEFDALVFSCGDAVPVFQQYAN 86 (175)
T ss_dssp HHHHHHTTCEEEEEESSSS---------------SEEEBTTSCEEECSEEGGGGTTCGGGCSEEEEECCTTGGGGGGCTT
T ss_pred hheeeeCCCEEEEEECCCC---------------CceecCCCeEEEeccCHHHhccCcccCCEEEECCCcCcccHHHHhh
Confidence 3444478999999999853 15788899999999999887 6678999999999 6 665555
Q ss_pred --cChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCC
Q 029299 78 --MNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATY 155 (195)
Q Consensus 78 --~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~ 155 (195)
.++.+.+||+++++++|+|++||+|+++|+++|||+||++|+||...+.+++ ..+.+. .++.|||+|||+|+
T Consensus 87 ~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~aGlL~G~~~T~~~~~~~~l~~--~~~~~~----~~v~Dg~iiTs~g~ 160 (175)
T 3cne_A 87 QPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFTGITKGKKVAVHPLAKPAIQN--GIATDE----KSEIDGNFFTAQDE 160 (175)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHTTTTTTCEEECCGGGGGGCCS--SEEESS----SEEEETTEEEESSG
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCcCCCEEEeCccHHHHhhc--CEEeCC----CEEEeCCEEeCCCh
Confidence 6789999999999999999999999999999999999999999998887766 666554 49999999999999
Q ss_pred CCHHHHHHHHHHHH
Q 029299 156 EGHPEFIRLFLKAL 169 (195)
Q Consensus 156 ~~~~~~~l~li~~l 169 (195)
.+++||++++|+++
T Consensus 161 ~~~~d~al~li~~l 174 (175)
T 3cne_A 161 NTIWTMLPKVIEAL 174 (175)
T ss_dssp GGGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999987
No 24
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=99.97 E-value=3.6e-32 Score=218.38 Aligned_cols=170 Identities=22% Similarity=0.353 Sum_probs=133.8
Q ss_pred CchhHHHHhCCCeEEEeCCCCCC-CCCCCccccCCC---Cccccccc---cCcceee-ccCCCCCCCCCcCEEEEcCCCC
Q 029299 1 MVPFQALLAFGVSVDAACPGKKS-GDVCPTAVHQST---GHQTYSET---RGHNFAL-NATFDEIDPTKYDGLVIPGGRA 72 (195)
Q Consensus 1 ~~p~~~l~~~G~~v~~~s~~~~~-~~~~~~~~~~~~---~~~~v~~~---~g~~i~~-~~~~~~~~~~~~D~livpGG~~ 72 (195)
++||++|+++|++|+++||+|++ .++.+... .+. .++.+... .+..+.. +..+++++..+||+||||||++
T Consensus 38 ~~p~~~l~~aG~~V~~aSp~g~~~~d~~s~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~v~~~~yD~l~ipGG~g 116 (247)
T 3n7t_A 38 LHPFNELTAAGFEVDVASETGTFGWDEHSLTQ-EYLSKEDEKVLHSEHNHFMEKMNKQVFKAGDLAPHDYGLMFVCGGHG 116 (247)
T ss_dssp HHHHHHHHHTTCEEEEEESSSCCCBCSGGGSG-GGCCHHHHHHHTCSSCHHHHHHHHCCEEGGGSCGGGCSEEEECCSTT
T ss_pred HHHHHHHHHCCCEEEEEeCCCCcccCcccccc-cccCHHHHHHHHhhhHHHHHHHhccCCCHHHCChhhCCEEEEeCCCc
Confidence 37999999999999999998764 22111000 000 00111111 2344666 8889999888999999999998
Q ss_pred h-hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC------CCCCCceEecCCCchH-------------------H
Q 029299 73 P-EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA------DVVKGRKCTAYPPVKP-------------------V 126 (195)
Q Consensus 73 ~-~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a------GlL~g~~~T~~~~~~~-------------------~ 126 (195)
+ ..+..++.+.+||+++++++|+|++||+|+++|+++ |||+||++|+||...+ .
T Consensus 117 ~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a~~~~g~gll~G~~~T~~~~~ee~~~~~~~~~p~~~~~~l~~~ 196 (247)
T 3n7t_A 117 ALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGIHDENGDSVIKDKTVTGFTTKGEIMIKVIDKMREDHLHTIADM 196 (247)
T ss_dssp HHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGCBCTTSSBTTTTCEECCCCHHHHHHTTCHHHHHHTTCCCHHHH
T ss_pred hhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHhhcccCCccccCceecCCCcHHHhhhhhhhhccccchhhHHHH
Confidence 7 457889999999999999999999999999999999 9999999999998743 3
Q ss_pred HHHCCCeeecCC-C-cceEEEcCCeEeCCCCCCHHHHHHHHHHHHcC
Q 029299 127 LIAAGASWIEPE-T-MAACVVDGNIITGATYEGHPEFIRLFLKALGG 171 (195)
Q Consensus 127 l~~~g~~~~~~~-~-~~~~v~Dg~iiT~~g~~~~~~~~l~li~~l~~ 171 (195)
+++.|+.|.+.. . ...+|+|||+||++|+.++.+|++++|+.|..
T Consensus 197 l~~~Ga~~~~~~~~~~~~vV~Dg~lITg~~p~sa~~~a~~lv~~L~~ 243 (247)
T 3n7t_A 197 AQTANAEYVPPEDPWDDFCKVDGRIVTGANPQSATNTARDTIKVYEG 243 (247)
T ss_dssp HHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHHHHH
T ss_pred HHHCCCEEecCCcCCCceEEEcCCEEECCChHHHHHHHHHHHHHHhh
Confidence 556789998741 1 23699999999999999999999999998864
No 25
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=99.97 E-value=3e-32 Score=218.56 Aligned_cols=168 Identities=19% Similarity=0.286 Sum_probs=132.1
Q ss_pred chhHHHHhCCCeEEEeCCCCCC-CCCCCccccC-CCC--cccc----ccccCcceeeccCCCCCCCCCcCEEEEcCCCCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKS-GDVCPTAVHQ-STG--HQTY----SETRGHNFALNATFDEIDPTKYDGLVIPGGRAP 73 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~-~~~~~~~~~~-~~~--~~~v----~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~ 73 (195)
.||++|+++|++|+++||++++ .++. +... +.. ...+ .++.|..+.++..+++++..+||+||||||+++
T Consensus 33 ~p~~vl~~ag~~v~~~s~~g~~~~d~~--s~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~l~~v~~~~~D~livpGG~~~ 110 (243)
T 1rw7_A 33 HPFNTFRKEGFEVDFVSETGKFGWDEH--SLAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGT 110 (243)
T ss_dssp HHHHHHHHTTCEEEEECSSSCCCBCGG--GGSTTTSCHHHHHHHHCTTSHHHHHHHTCBCGGGCCGGGEEEEEECCSTTH
T ss_pred HHHHHHHHCCCEEEEECCCCCCCcCcc--cccccccChHHHHHHHhhhHHHHhhhccCCChHHCCHhhCcEEEECCCCCc
Confidence 6999999999999999998764 2211 1100 000 0000 112466788889999887789999999999986
Q ss_pred -hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCC-------CCCCceEecCCCchHH-------------------
Q 029299 74 -EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD-------VVKGRKCTAYPPVKPV------------------- 126 (195)
Q Consensus 74 -~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aG-------lL~g~~~T~~~~~~~~------------------- 126 (195)
..+..++.+.+||+++++++|+|++||+|+++|+++| ||+||++|+||...+.
T Consensus 111 ~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~ag~~~~g~~lL~G~~~T~~~~~~e~~~~~~~~~p~~~~~~l~~~ 190 (243)
T 1rw7_A 111 LFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNLATVEDV 190 (243)
T ss_dssp HHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTCBCTTTSSBTTTTCEECCSCHHHHHHTTCHHHHHHTTCCCHHHH
T ss_pred hhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhcCcccCCceeeCCcEEeecCCHHHhhccccccccccccccHHHH
Confidence 4477899999999999999999999999999999999 9999999999986554
Q ss_pred HHHCCCeeecCC-C-cceEEEcCCeEeCCCCCCHHHHHHHHHHHHcC
Q 029299 127 LIAAGASWIEPE-T-MAACVVDGNIITGATYEGHPEFIRLFLKALGG 171 (195)
Q Consensus 127 l~~~g~~~~~~~-~-~~~~v~Dg~iiT~~g~~~~~~~~l~li~~l~~ 171 (195)
+++.++.|.... . +..+|+|||+|||+|+.++++|++++|+++..
T Consensus 191 l~~~g~~~~~~~~~~~~~vV~Dg~liT~~g~~s~~d~al~lv~~l~~ 237 (243)
T 1rw7_A 191 AKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 (243)
T ss_dssp HHHTTCEECCCSSTTSCCEEEETTEEEECSGGGHHHHHHHHHHCCC-
T ss_pred HHHcCCEEEcCCCCCCCCEEEeCCEEECCChhHHHHHHHHHHHHHhh
Confidence 555688887420 0 23599999999999999999999999997643
No 26
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=99.97 E-value=5.1e-32 Score=216.28 Aligned_cols=158 Identities=19% Similarity=0.245 Sum_probs=136.7
Q ss_pred chhHHHHhCC--CeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCC-CChhhhcc
Q 029299 2 VPFQALLAFG--VSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGG-RAPEYLAM 78 (195)
Q Consensus 2 ~p~~~l~~~G--~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG-~~~~~l~~ 78 (195)
.|++.|++++ ++|+++| +++ ++++++|..+.++..+++ ..+||+|||||| .++..+..
T Consensus 38 ~p~dvl~~~~~~~~v~~vs-~~~----------------~V~ss~G~~v~~d~~l~~--~~~~D~liVPGG~~g~~~l~~ 98 (236)
T 3bhn_A 38 LMNDLLGRTSDSWTVRILG-TKP----------------EHHSQLGMTVKTDGHVSE--VKEQDVVLITSGYRGIPAALQ 98 (236)
T ss_dssp HHHHHHTTCSSSEEEEEEE-SSS----------------EEEBTTCCEEECSEEGGG--GGGCSEEEECCCTTHHHHHHT
T ss_pred HHHHHHHcCCCCEEEEEEE-CCC----------------cEEecCCcEEecCccccc--ccCCCEEEEcCCccCHhhhcc
Confidence 5899999977 8999999 764 477889999999998887 368999999999 67766778
Q ss_pred ChHHHHHHHHHHhCCC-eEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCC
Q 029299 79 NDSVIDLVRKFSNSGK-TIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYEG 157 (195)
Q Consensus 79 ~~~l~~~l~~~~~~~k-~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~ 157 (195)
++.+.+|| ++++++ +|++||+|+++|+++|||+||++|+||...+.+++.+..+.+. .+++|||+|||+|+.+
T Consensus 99 ~~~l~~~L--~~~~~~~~IaaIC~G~~lLa~AGLL~Gr~aTth~~~~~~l~~~~p~~~~~----~vV~Dg~iiTs~G~~a 172 (236)
T 3bhn_A 99 DENFMSAL--KLDPSRQLIGSICAGSFVLHELGLLKGKKLTTNPDAKAVLQGMGGDVQDL----PLVIEGNIATAGGCLS 172 (236)
T ss_dssp CHHHHHHC--CCCTTTCEEEEETTHHHHHHHTTTTTTCEECCCGGGHHHHHHTTCEECSS----SEEEETTEEEECSGGG
T ss_pred CHHHHHHH--HhCCCCCEEEEEcHHHHHHHHcCCCCCCEEECCHHHHHHHHHhCCccCCC----cEEEeCCEEECCCHHH
Confidence 99999999 666676 9999999999999999999999999999999999987677443 4999999999999999
Q ss_pred HHHHHHHHHHHHcCcc-ccc-ccceeeec
Q 029299 158 HPEFIRLFLKALGGTI-TGS-DKRILFLC 184 (195)
Q Consensus 158 ~~~~~l~li~~l~~~~-a~~-~~~~~~~~ 184 (195)
++||++++|+++.++. |.+ ++.++|..
T Consensus 173 ~~dlal~lIe~l~G~~~A~~va~~l~~~~ 201 (236)
T 3bhn_A 173 LLYLVGWLAERLFDSVKRKQIQNQLIPAG 201 (236)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHTTTSCTT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHhcccCC
Confidence 9999999999998876 455 66666543
No 27
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=99.97 E-value=6.1e-32 Score=222.02 Aligned_cols=170 Identities=16% Similarity=0.208 Sum_probs=135.2
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCcccccccc---CcceeeccCCCCC-----CCCCcCEEEEcCCCCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETR---GHNFALNATFDEI-----DPTKYDGLVIPGGRAP 73 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~---g~~i~~~~~~~~~-----~~~~~D~livpGG~~~ 73 (195)
.|++.|+++|++|+++|+++++.....++... ....+.+.. |..+.++..++++ +..+||+||||||+++
T Consensus 80 ~p~~vL~~ag~~v~i~S~~g~~v~~d~~s~~~--~~~~~~~~~~~~g~~l~~~~~l~~v~~~~~~~~~yD~livPGG~g~ 157 (291)
T 1n57_A 80 LPLYHLHAAGFEFEVATISGLMTKFEYWAMPH--KDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGA 157 (291)
T ss_dssp HHHHHHHHTTCCEEEEESSSCCCCBCGGGCCT--TCTTHHHHHHHHHHHHHSCEEHHHHHHTCCTTCSEEEEEECCSGGG
T ss_pred HHHHHHHHCCCEEEEEeCCCCccccccccccc--ccHHHHHHHHhccceecCCccHHHHhhhccCcccCCEEEecCCcch
Confidence 69999999999999999998764322222110 011233333 7788888888773 4679999999999987
Q ss_pred h-hhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCC----CCCCceEecCCCchHHH-------------------HH
Q 029299 74 E-YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD----VVKGRKCTAYPPVKPVL-------------------IA 129 (195)
Q Consensus 74 ~-~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aG----lL~g~~~T~~~~~~~~l-------------------~~ 129 (195)
. .+..++.+.+||+++++++|+|++||+|+++|++++ ||+||++|+||...+.+ ++
T Consensus 158 ~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a~~~~GLL~Gr~~Tt~~~~~e~~~~~~~~~~~~~P~~le~~L~~ 237 (291)
T 1n57_A 158 LIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKK 237 (291)
T ss_dssp GSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGGTTSCCTTTTCEECCCCGGGGGTTTTTTSSSSCCSSCHHHHHHH
T ss_pred hhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhhcccCccCCCCEEEeCCCHHHhhhccccccccccchhHHHHHHH
Confidence 6 577899999999999999999999999999988874 99999999999877653 44
Q ss_pred CCCeeecCCCcceEEEcCCeEeCCCCCCHHHHHHHHHHHHcCcc
Q 029299 130 AGASWIEPETMAACVVDGNIITGATYEGHPEFIRLFLKALGGTI 173 (195)
Q Consensus 130 ~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~~~l~li~~l~~~~ 173 (195)
.|+.|...+.+..+|+|||+|||+|+.++++|++++|+++.++.
T Consensus 238 ~ga~~~~~~~~~~vV~Dg~lITs~gp~s~~d~al~lve~l~g~~ 281 (291)
T 1n57_A 238 MGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAAY 281 (291)
T ss_dssp TTCEECCSSCSCCEEEETTEEEESSGGGHHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCCCCEEEeCCEEECCCHHHHHHHHHHHHHHHhCch
Confidence 57777732112359999999999999999999999999987764
No 28
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=99.95 E-value=5.4e-29 Score=198.30 Aligned_cols=161 Identities=21% Similarity=0.289 Sum_probs=127.2
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeec-------cCCCCCCCCCcCEEEEcCCCChh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALN-------ATFDEIDPTKYDGLVIPGGRAPE 74 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~-------~~~~~~~~~~~D~livpGG~~~~ 74 (195)
.||+.|+++|++|+++|+++++.... +...+ +++.++.|..+.++ ..+++++..+||+||||||.++.
T Consensus 29 ~p~~~l~~ag~~v~~~s~~g~~~~v~----d~~s~-~~~~~~~g~~i~~~~~~~~~~~~l~~~~~~~~D~livpGG~~~~ 103 (232)
T 1vhq_A 29 LTLLAISRSGAQAVCFAPDKQQVDVI----NHLTG-EAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAA 103 (232)
T ss_dssp HHHHHHHHTTCEEEEEECSSBCSCCB----CTTTC-CBCSCCCBHHHHHTTTTTTCCEEGGGCCGGGCSEEEECCSTHHH
T ss_pred HHHHHHHHCCCEEEEEecCCCCCccc----ccccc-cchhhhhhhhHHHHHhhhcCCCCHHHcCcccCCEEEECCCcchH
Confidence 59999999999999999988652110 01111 24566778877776 77888766789999999998752
Q ss_pred -hh----------ccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCC-CceEecC-C-CchHHHHHCCCeeecCCCc
Q 029299 75 -YL----------AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVK-GRKCTAY-P-PVKPVLIAAGASWIEPETM 140 (195)
Q Consensus 75 -~l----------~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~-g~~~T~~-~-~~~~~l~~~g~~~~~~~~~ 140 (195)
.+ ..++.+.+||+++++++|+|++||+|+++|+++ |+ ||++|+| | ...+.+++.|+.|++...+
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a--L~~Gr~~Tth~~~~~~~~l~~~g~~~~~~~~~ 181 (232)
T 1vhq_A 104 KNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKI--FDFPLRLTIGTDIDTAEVLEEMGAEHVPCPVD 181 (232)
T ss_dssp HTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHH--CSSCCEECCCSCHHHHHHHHHTTCEECCCCTT
T ss_pred HHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHH--hcCCCEEeccCCHHHHHHHHHcCCEEecCCCC
Confidence 12 248999999999999999999999999999999 79 9999999 6 5678888888888875322
Q ss_pred ceEEE-cCCeEeCCCCCCHHHHHHHHHHHHcCcc
Q 029299 141 AACVV-DGNIITGATYEGHPEFIRLFLKALGGTI 173 (195)
Q Consensus 141 ~~~v~-Dg~iiT~~g~~~~~~~~l~li~~l~~~~ 173 (195)
..++. |||+|||+ +++|++++|+++.+..
T Consensus 182 ~~~vd~dg~liTs~----~~d~al~lv~~~~G~~ 211 (232)
T 1vhq_A 182 DIVVDEDNKIVTTP----AYMLAQNIAEAASGID 211 (232)
T ss_dssp CCEEETTTTEEEEC----GGGTCSSHHHHHHHHH
T ss_pred ceEEecCCCEEECC----CHHHHHHHHHHHcCHH
Confidence 23443 59999996 8899999999888774
No 29
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=99.95 E-value=8.2e-29 Score=198.30 Aligned_cols=151 Identities=21% Similarity=0.279 Sum_probs=120.6
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeec-------cCCCCCCCCCcCEEEEcCCCCh-
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALN-------ATFDEIDPTKYDGLVIPGGRAP- 73 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~-------~~~~~~~~~~~D~livpGG~~~- 73 (195)
.||+.|+++|++|+++||++++.... +...+ +++.++.|+.+.++ .++++++..+||+||||||.+.
T Consensus 46 ~p~~vL~~aG~~V~~~S~~~g~~~~~----~~~~g-~~v~~s~g~~v~~d~~~~~~~~~l~dv~~~~~D~livPGG~~~~ 120 (242)
T 3l3b_A 46 LVMLELDRHNVNFKCFAPNKNQKQVV----DHKKK-ESVGEVRNILVESARIARGSVYDIEQIRVEEFDMLVIPGGYGVA 120 (242)
T ss_dssp HHHHHHHHTTCEEEEEECSSBCSCEE----ETTTT-EEESCCCBHHHHHHHHTTTCEEEGGGCCGGGCSEEEECCCHHHH
T ss_pred HHHHHHHHCCCEEEEEecCCCccccc----ccccC-ccccccCCeEEecchhccccCCChHHCCcccCCEEEEcCCcchh
Confidence 69999999999999999988653221 11111 35677788888877 7788887789999999999864
Q ss_pred hhh-----------ccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCC-CCCCceEecCCCchHHHHHCCCeeecCCCcc
Q 029299 74 EYL-----------AMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD-VVKGRKCTAYPPVKPVLIAAGASWIEPETMA 141 (195)
Q Consensus 74 ~~l-----------~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aG-lL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~ 141 (195)
..+ ..++.+.+||+++++++|+|++||+|+++|+++| ||+|+++|+||.....+++.|+.|++.+. .
T Consensus 121 ~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag~lL~Gr~~T~~~~~~~~l~~~Ga~~~~~~~-~ 199 (242)
T 3l3b_A 121 KNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALLKDIAKVKVTIGEDSNGLIDKMGGVHVDCPT-I 199 (242)
T ss_dssp HHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHHTTTCCCEECCCC----CHHHHTCEECCCCT-T
T ss_pred hhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhCcccCCCEEEecCChHHHHHHCCCEEEcCCC-C
Confidence 222 4579999999999999999999999999999999 99999999999988778888999988531 2
Q ss_pred eEEEc--CCeEeCCCCCCH
Q 029299 142 ACVVD--GNIITGATYEGH 158 (195)
Q Consensus 142 ~~v~D--g~iiT~~g~~~~ 158 (195)
.+|+| ||+||+++...+
T Consensus 200 ~vVvD~~g~liTs~a~~~~ 218 (242)
T 3l3b_A 200 KSVKDDVNRIFSCSAYMRN 218 (242)
T ss_dssp CCEEETTTTEEEECGGGSC
T ss_pred eEEEECCCCEEECcCcccC
Confidence 47888 999999987543
No 30
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=99.81 E-value=3.7e-20 Score=166.78 Aligned_cols=133 Identities=18% Similarity=0.237 Sum_probs=113.2
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCC-ChhhhccCh
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGR-APEYLAMND 80 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~~~~l~~~~ 80 (195)
.|++.|+++|++|+++|+.++ +|++++|..+.++..+++++..+||+||||||. ++..+..++
T Consensus 552 ~p~dvL~~AG~~V~ivS~~gg----------------~V~ss~G~~v~~d~~l~~v~~~~yDaViVPGG~~~~~~l~~~~ 615 (715)
T 1sy7_A 552 AAYAAISANQAIPLVIGPRRS----------------KVTAANGSTVQPHHHLEGFRSTMVDAIFIPGGAKAAETLSKNG 615 (715)
T ss_dssp HHHHHHHHTTCEEEEEESCSS----------------CEEBTTSCEECCSEETTTCCGGGSSEEEECCCHHHHHHHHTCH
T ss_pred HHHHHHHhcCCEEEEEECCCC----------------ceecCCCceEecccccccCCcccCCEEEEcCCcccHhhhccCH
Confidence 589999999999999999875 367788999999999998877789999999995 455677899
Q ss_pred HHHHHHHHHHhCCCeEEEecHHHHHHHhC-CCCCCceEecCCCchHHHHHCCCeeecCCCcceEEEcCCeEeCCCCC---
Q 029299 81 SVIDLVRKFSNSGKTIASICHGQLILAAA-DVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACVVDGNIITGATYE--- 156 (195)
Q Consensus 81 ~l~~~l~~~~~~~k~i~aic~G~~lLa~a-GlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~--- 156 (195)
.+++||+++++++|+|++||+|+++|+++ ||.+- ++.|. . .+|+|+++||++|+.
T Consensus 616 ~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlGL~~L-------------~~aGa----~----~VVvDg~lITs~gp~~~~ 674 (715)
T 1sy7_A 616 RALHWIREAFGHLKAIGATGEAVDLVAKAIALPQV-------------TVSSE----A----EVHESYGVVTLKKVKPES 674 (715)
T ss_dssp HHHHHHHHHHHTTCEEEEETTHHHHHHHHHCCTTS-------------CCCCS----S----SCEEETTEEEESSCCTTT
T ss_pred HHHHHHHHHHhCCCEEEEECHHHHHHHHccCcHhH-------------HhcCC----C----cEEEeCCEEECCCCcccc
Confidence 99999999999999999999999999999 98321 22222 2 389999999999986
Q ss_pred ---------CHHHHHHHHHHHHcC
Q 029299 157 ---------GHPEFIRLFLKALGG 171 (195)
Q Consensus 157 ---------~~~~~~l~li~~l~~ 171 (195)
+..+|+..+++.+..
T Consensus 675 l~~~~~i~~s~~~fa~~fi~~L~~ 698 (715)
T 1sy7_A 675 FTDAVKIAKGAAGFLGEFFYAIAQ 698 (715)
T ss_dssp TTSCCCCSTTCSSHHHHHHHHHHT
T ss_pred cccccccccCHHHHHHHHHHHHHc
Confidence 667799999998864
No 31
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=99.65 E-value=1.3e-16 Score=143.13 Aligned_cols=94 Identities=19% Similarity=0.176 Sum_probs=87.7
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChH
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDS 81 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~ 81 (195)
.|++.|+++|++|+++++.++ .|+++.|..+.+|..+++++..+||+|||||| ++..+..++.
T Consensus 618 ~pvdaLr~AG~~V~vVS~~~g----------------~V~gs~G~~V~aD~t~~~v~s~~fDALVVPGG-g~~~Lr~d~~ 680 (753)
T 3ttv_A 618 AILKALKAKGVHAKLLYSRMG----------------EVTADDGTVLPIAATFAGAPSLTVDAVIVPCG-NIADIADNGD 680 (753)
T ss_dssp HHHHHHHHHTCEEEEEESSSS----------------EEECTTSCEEECCEETTTSCGGGCSEEEECCS-CGGGTTTCHH
T ss_pred HHHHHHHHCCCEEEEEEcCCC----------------eEEeCCCCEEecccchhhCCCcCCCEEEECCC-ChHHhhhCHH
Confidence 589999999999999999865 47888999999999999998788999999999 8888889999
Q ss_pred HHHHHHHHHhCCCeEEEecHHHHHHHhCCCC
Q 029299 82 VIDLVRKFSNSGKTIASICHGQLILAAADVV 112 (195)
Q Consensus 82 l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL 112 (195)
+++||+++++++|+|++||+|+++|+++||-
T Consensus 681 vl~~Vre~~~~gKpIAAIC~Gp~lLa~AGL~ 711 (753)
T 3ttv_A 681 ANYYLMEAYKHLKPIALAGDARKFKATIKIA 711 (753)
T ss_dssp HHHHHHHHHHTTCCEEEEGGGGGGGGGGTCC
T ss_pred HHHHHHHHHhcCCeEEEECchHHHHHHcCCC
Confidence 9999999999999999999999999999973
No 32
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=99.46 E-value=1.6e-13 Score=122.60 Aligned_cols=112 Identities=18% Similarity=0.258 Sum_probs=91.7
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCC-C--------
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGR-A-------- 72 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~-~-------- 72 (195)
.|++.|+++|++|+++++..+. .+|.++++++..+||+||||||. +
T Consensus 549 ~~~~~L~~aG~~V~vVs~~~g~-------------------------~vD~t~~~~~s~~fDAVvlPGG~~g~~~~~~~~ 603 (688)
T 2iuf_A 549 KLQVALSSVGVDVVVVAERXAN-------------------------NVDETYSASDAVQFDAVVVADGAEGLFGADSFT 603 (688)
T ss_dssp HHHHHHGGGTCEEEEEESSCCT-------------------------TCCEESTTCCGGGCSEEEECTTCGGGCCTTTTT
T ss_pred HHHHHHHHCCCEEEEEeccCCc-------------------------ccccchhcCCccccCeEEecCCCcccccccccc
Confidence 5889999999999999996320 55778888878899999999995 4
Q ss_pred --------hhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCceEecCCCchHHHHHCCCeeecCCCcceEE
Q 029299 73 --------PEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGRKCTAYPPVKPVLIAAGASWIEPETMAACV 144 (195)
Q Consensus 73 --------~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~~~T~~~~~~~~l~~~g~~~~~~~~~~~~v 144 (195)
+..|..++.++++|++++++||+|++||+|+++|.++|+..
T Consensus 604 ~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~~aGi~~------------------------------- 652 (688)
T 2iuf_A 604 VEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESGQISS------------------------------- 652 (688)
T ss_dssp CCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHTTCCT-------------------------------
T ss_pred cccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHHHcCCCC-------------------------------
Confidence 55688899999999999999999999999999999999842
Q ss_pred EcCCeEeCCCCCCHHHHHHHHHHHHcC
Q 029299 145 VDGNIITGATYEGHPEFIRLFLKALGG 171 (195)
Q Consensus 145 ~Dg~iiT~~g~~~~~~~~l~li~~l~~ 171 (195)
.|.++||++++ .-+|+..+++.+..
T Consensus 653 ~d~GVvts~~~--~~~f~~~fi~~la~ 677 (688)
T 2iuf_A 653 ERQGVYTGKNA--GDAFAKDIKSGLST 677 (688)
T ss_dssp TSTTEEEESSS--SHHHHHHHHHHHHH
T ss_pred CCCCEEEcCCc--cHHHHHHHHHHHHh
Confidence 24567777665 44577777776543
No 33
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=99.38 E-value=1e-12 Score=117.23 Aligned_cols=86 Identities=19% Similarity=0.215 Sum_probs=75.9
Q ss_pred chhHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCCh--------
Q 029299 2 VPFQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAP-------- 73 (195)
Q Consensus 2 ~p~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~-------- 73 (195)
.|++.|+++|++|++++|..+ .| +|.++++++..+||+||||||...
T Consensus 556 ~p~~aL~~aGa~V~vVsp~~g---------------------~G----vD~t~~~~~s~~fDAVvlPGG~~~~~~~~~~~ 610 (688)
T 3ej6_A 556 ALKEQLEKDGLKVTVIAEYLA---------------------SG----VDQTYSAADATAFDAVVVAEGAERVFSGKGAM 610 (688)
T ss_dssp HHHHHHHHTTCEEEEEESSCC---------------------TT----CCEETTTCCGGGCSEEEECTTCCTTTSTTTTC
T ss_pred HHHHHHHHCCCEEEEEeCCCC---------------------CC----cccCcccCChhcCcEEEECCCcccccccccch
Confidence 588999999999999999742 12 688899888889999999999642
Q ss_pred hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCC
Q 029299 74 EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVV 112 (195)
Q Consensus 74 ~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL 112 (195)
..|..++.+++||+++++++|+|++||+|+++|.++|+-
T Consensus 611 d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~~AGI~ 649 (688)
T 3ej6_A 611 SPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQSIGVE 649 (688)
T ss_dssp CTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHHHTTCC
T ss_pred hhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHHHcCCC
Confidence 567889999999999999999999999999999999973
No 34
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=98.97 E-value=8.9e-10 Score=85.50 Aligned_cols=56 Identities=30% Similarity=0.568 Sum_probs=47.3
Q ss_pred CCcCEEEEcCCCChh-h-----hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCCCCCc
Q 029299 60 TKYDGLVIPGGRAPE-Y-----LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAADVVKGR 115 (195)
Q Consensus 60 ~~~D~livpGG~~~~-~-----l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGlL~g~ 115 (195)
.++|+||||||.... . +..++.+.++|+++.+++++|.+||.|.++|+.+|+|.|+
T Consensus 40 ~~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~ 101 (213)
T 3d54_D 40 DDYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGA 101 (213)
T ss_dssp SSCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSE
T ss_pred ccCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCC
Confidence 579999999996532 1 1235678999999999999999999999999999999884
No 35
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=98.36 E-value=2.8e-07 Score=71.94 Aligned_cols=50 Identities=30% Similarity=0.634 Sum_probs=40.8
Q ss_pred CCcCEEEEcCCCChh--hhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~--~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|+||+|||+... .+..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 59 ~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~ 110 (219)
T 1q7r_A 59 EGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKR 110 (219)
T ss_dssp TTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEE
T ss_pred hhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHH
Confidence 579999999997532 23234456799999999999999999999999985
No 36
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=98.33 E-value=4e-07 Score=69.65 Aligned_cols=50 Identities=32% Similarity=0.654 Sum_probs=40.4
Q ss_pred CCcCEEEEcCCCCh--hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAP--EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~--~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|+||+|||... ..+..+..+.++|+++.++++|+.+||.|.++|+.+
T Consensus 37 ~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~ 88 (196)
T 2nv0_A 37 NEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKE 88 (196)
T ss_dssp GGCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBC
T ss_pred hhCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHH
Confidence 46899999999743 223233456899999999999999999999999985
No 37
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=98.28 E-value=6.3e-07 Score=68.20 Aligned_cols=47 Identities=19% Similarity=0.417 Sum_probs=38.8
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||+.+. ....+.++|+++.++++|+.+||.|.++|+.+
T Consensus 42 ~~~dglil~Gg~~~~---~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~ 88 (189)
T 1wl8_A 42 MNPKGIIFSGGPSLE---NTGNCEKVLEHYDEFNVPILGICLGHQLIAKF 88 (189)
T ss_dssp TCCSEEEECCCSCTT---CCTTHHHHHHTGGGTCSCEEEETHHHHHHHHH
T ss_pred cCCCEEEECCCCChh---hhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHH
Confidence 369999999997332 24556889988778999999999999999986
No 38
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=98.18 E-value=1.1e-06 Score=68.05 Aligned_cols=50 Identities=24% Similarity=0.465 Sum_probs=39.4
Q ss_pred CCcCEEEEcCCCChh--hhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~--~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|+||+|||.... .+..+..+.++|+++.++++|+.+||.|.++|+.+
T Consensus 56 ~~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~ 107 (208)
T 2iss_D 56 DMVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKR 107 (208)
T ss_dssp GGCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEE
T ss_pred hhCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHH
Confidence 469999999985321 12223446789999999999999999999999986
No 39
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=98.16 E-value=6e-06 Score=65.10 Aligned_cols=50 Identities=24% Similarity=0.504 Sum_probs=40.4
Q ss_pred CCcCEEEEcCCCCh-hh----hccC--hHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAP-EY----LAMN--DSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~-~~----l~~~--~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.+||+|||+||++. .. ...- ..+.++|+++.++++||.+||.|.++|+.+
T Consensus 44 ~~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~ 100 (236)
T 3l7n_A 44 DDFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVA 100 (236)
T ss_dssp GGCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHH
T ss_pred cccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHH
Confidence 57999999999864 21 1111 347899999999999999999999999986
No 40
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.16 E-value=1.6e-06 Score=65.80 Aligned_cols=50 Identities=30% Similarity=0.468 Sum_probs=40.2
Q ss_pred CCcCEEEEcCCCC--hhhhccChHHHHHHHHHHhCC-CeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRA--PEYLAMNDSVIDLVRKFSNSG-KTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~--~~~l~~~~~l~~~l~~~~~~~-k~i~aic~G~~lLa~a 109 (195)
+++|.|++|||+. ...+..+..+.++|+++.+++ +||.+||.|.++|+.+
T Consensus 38 ~~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~ 90 (191)
T 2ywd_A 38 EGLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKE 90 (191)
T ss_dssp TTCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEE
T ss_pred ccCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHH
Confidence 4689999999953 222322456789999999999 9999999999999986
No 41
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=98.14 E-value=4.1e-06 Score=66.81 Aligned_cols=50 Identities=24% Similarity=0.395 Sum_probs=40.5
Q ss_pred CCcCEEEEcCCCCh-h-hhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAP-E-YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~-~-~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.+||.|||+||+.. . .......+.++|+++.+.++|+.+||.|.++|+.+
T Consensus 47 ~~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~ 98 (250)
T 3m3p_A 47 RDCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKA 98 (250)
T ss_dssp GGSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ccCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 57999999999753 2 12223467899999999999999999999999986
No 42
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=98.14 E-value=2.9e-06 Score=65.08 Aligned_cols=50 Identities=24% Similarity=0.398 Sum_probs=39.4
Q ss_pred CCcCEEEEcCCCCh-hhh--ccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAP-EYL--AMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~-~~l--~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+||+..+ ..+ ..+..+.++|+++.++++||.+||.|.++|+.+
T Consensus 39 ~~~d~lil~G~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~ 91 (200)
T 1ka9_H 39 EEADLLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEG 91 (200)
T ss_dssp SSCSEEEECCCSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSE
T ss_pred ccCCEEEECCCCcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHh
Confidence 47999999985333 111 123457899999999999999999999999997
No 43
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=98.08 E-value=1.9e-06 Score=65.95 Aligned_cols=48 Identities=19% Similarity=0.305 Sum_probs=36.3
Q ss_pred CcCEEEEcCCCChhh-hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 61 KYDGLVIPGGRAPEY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 61 ~~D~livpGG~~~~~-l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
++|.||++||.+... ..+.+...++|+++ ++++|+.+||.|.++|+.+
T Consensus 45 ~~dglil~gG~~~~~~~~~~~~~~~~i~~~-~~~~PvLGIC~G~QlL~~~ 93 (195)
T 1qdl_B 45 DPDRLIISPGPGTPEKREDIGVSLDVIKYL-GKRTPILGVCLGHQAIGYA 93 (195)
T ss_dssp CCSEEEECCCSSCTTSHHHHTTHHHHHHHH-TTTSCEEEETHHHHHHHHH
T ss_pred CCCEEEECCCCCChhhhhhhhHHHHHHHHh-cCCCcEEEEehHHHHHHHH
Confidence 589999988876422 11122356888875 8899999999999999986
No 44
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=98.07 E-value=4.8e-06 Score=79.68 Aligned_cols=57 Identities=19% Similarity=0.356 Sum_probs=46.8
Q ss_pred CCCcCEEEEcCCCChh-----------hhccChHHHHHHHHHH-hCCCeEEEecHHHHHHHhC-CCCCCc
Q 029299 59 PTKYDGLVIPGGRAPE-----------YLAMNDSVIDLVRKFS-NSGKTIASICHGQLILAAA-DVVKGR 115 (195)
Q Consensus 59 ~~~~D~livpGG~~~~-----------~l~~~~~l~~~l~~~~-~~~k~i~aic~G~~lLa~a-GlL~g~ 115 (195)
..++|.|++|||.... ....++.+.+.|++++ ++++++.+||+|.++|.++ |||.|.
T Consensus 1090 l~~~d~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllPg~ 1159 (1303)
T 3ugj_A 1090 LGNFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGS 1159 (1303)
T ss_dssp GGGCSEEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGSTTC
T ss_pred HhhCCEEEECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHHhcCcCCCC
Confidence 4679999999996421 1335677888899866 6899999999999999999 999986
No 45
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=97.91 E-value=1.2e-05 Score=67.78 Aligned_cols=48 Identities=27% Similarity=0.444 Sum_probs=41.1
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||++||++... ......++|+++.++++||.+||.|.++|+.+
T Consensus 230 ~~~DGliLsGGPgdp~--~~~~~~~~Ir~~~~~~~PILGIClG~QLLa~A 277 (379)
T 1a9x_B 230 MNPDGIFLSNGPGDPA--PCDYAITAIQKFLETDIPVFGICLGHQLLALA 277 (379)
T ss_dssp TCCSEEEECCCSBCST--TCHHHHHHHHHHTTSCCCEEEETHHHHHHHHH
T ss_pred cCCCEEEEeCCCCChH--HHHHHHHHHHHHHHcCCCEEEECchHHHHHHH
Confidence 4699999999986432 35678899999999999999999999999986
No 46
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=97.82 E-value=4.4e-05 Score=60.26 Aligned_cols=50 Identities=20% Similarity=0.315 Sum_probs=39.6
Q ss_pred CCcCEEEEcCCCC-hhh---hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRA-PEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~-~~~---l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||+. +.. ......+.++|+++.++++|+.+||.|.++|+.+
T Consensus 56 ~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~a 109 (239)
T 1o1y_A 56 EEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKV 109 (239)
T ss_dssp GGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred hcCCEEEECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHH
Confidence 5799999999974 211 1111367899999999999999999999999986
No 47
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.79 E-value=1.4e-05 Score=62.51 Aligned_cols=50 Identities=30% Similarity=0.523 Sum_probs=40.6
Q ss_pred CCcCEEEEcCCCCh--hhhccC--hHHHHHHHHHHhC-CCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAP--EYLAMN--DSVIDLVRKFSNS-GKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~--~~l~~~--~~l~~~l~~~~~~-~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||... ..+..+ ..+.++|+++.++ ++||.+||.|.++|+.+
T Consensus 42 ~~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~ 96 (227)
T 2abw_A 42 GLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKN 96 (227)
T ss_dssp HTCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEE
T ss_pred ccCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHH
Confidence 46999999998742 223232 5689999999999 99999999999999986
No 48
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=97.78 E-value=1.7e-05 Score=63.21 Aligned_cols=50 Identities=32% Similarity=0.545 Sum_probs=39.4
Q ss_pred CCcCEEEEcCCCCh--hhhc-------------cChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAP--EYLA-------------MNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~--~~l~-------------~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
+++|.||++||.+. ..+. .+...+++|+++.++++||.+||.|.++|+.+
T Consensus 60 ~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a 124 (254)
T 3fij_A 60 SLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVA 124 (254)
T ss_dssp HTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHH
Confidence 46999999999651 1111 12347899999999999999999999999986
No 49
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=97.76 E-value=3.2e-05 Score=58.44 Aligned_cols=47 Identities=28% Similarity=0.571 Sum_probs=34.9
Q ss_pred CCcCEEEEcCCCChhh--hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEY--LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~--l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||++... +.....+.++++ ++++|+.+||.|.++|+.+
T Consensus 36 ~~~dglil~GG~~~~~~~~~~~~~~~~~i~---~~~~PilGIC~G~Qll~~~ 84 (186)
T 2ywj_A 36 EGIDALIIPGGESTAIGKLMKKYGLLEKIK---NSNLPILGTCAGMVLLSKG 84 (186)
T ss_dssp TTCSEEEECCSCHHHHHHHHHHTTHHHHHH---TCCCCEEEETHHHHHHSSC
T ss_pred ccCCEEEECCCCchhhhhhhhccCHHHHHH---hcCCcEEEECHHHHHHHHH
Confidence 5689999999975321 111223556665 7899999999999999987
No 50
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=97.68 E-value=5.8e-05 Score=61.28 Aligned_cols=47 Identities=15% Similarity=0.199 Sum_probs=40.2
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||++...+ +.+.++++++.++++||.+||.|.++|+.+
T Consensus 89 ~~~dgiil~GG~~~~~~---~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a 135 (289)
T 2v4u_A 89 CKADGILVPGGFGIRGT---LGKLQAISWARTKKIPFLGVXLGMQLAVIE 135 (289)
T ss_dssp HHCSEEEECSCCSSTTH---HHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hhCCEEEecCCCCchhH---HHHHHHHHHHHHcCCcEEEECccHHHHHHH
Confidence 46899999999875322 568899999999999999999999999873
No 51
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=97.62 E-value=9.5e-05 Score=57.23 Aligned_cols=47 Identities=30% Similarity=0.418 Sum_probs=33.7
Q ss_pred CCcCEEEEcCC-CChhh-hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGG-RAPEY-LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG-~~~~~-l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+||| ++... ....+.+.++ ..++++|+.+||.|.++|+.+
T Consensus 53 ~~~DglIl~GG~p~~~~~~~~~~~l~~~---~~~~~~PiLGIC~G~Qll~~~ 101 (212)
T 2a9v_A 53 DGLDGLVLSGGAPNIDEELDKLGSVGKY---IDDHNYPILGICVGAQFIALH 101 (212)
T ss_dssp TTCSEEEEEEECSCGGGTGGGHHHHHHH---HHHCCSCEEEETHHHHHHHHH
T ss_pred hCCCEEEECCCCCCCCcccccchhHHHH---HHhCCCCEEEEChHHHHHHHH
Confidence 35999999999 65421 1122334444 357899999999999999986
No 52
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=97.51 E-value=1.2e-05 Score=62.05 Aligned_cols=50 Identities=24% Similarity=0.308 Sum_probs=36.0
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+||+..+......-....+++...+.++|+.+||.|.++|+.+
T Consensus 39 ~~~D~lilPG~g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~ 88 (211)
T 4gud_A 39 LAADKLFLPGVGTASEAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKL 88 (211)
T ss_dssp HHCSEEEECCCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSE
T ss_pred hCCCEEEECCCCCHHHHHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHH
Confidence 35799999986544322122223346777788999999999999999875
No 53
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=97.50 E-value=8.3e-05 Score=56.80 Aligned_cols=51 Identities=27% Similarity=0.442 Sum_probs=38.7
Q ss_pred CCcCEEEEcCCCChh-hh--ccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCC
Q 029299 60 TKYDGLVIPGGRAPE-YL--AMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 110 (195)
Q Consensus 60 ~~~D~livpGG~~~~-~l--~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aG 110 (195)
.++|.||+||+..+. .. ..+..+.++|+++.++++||.+||.|.++|+.+.
T Consensus 41 ~~~dglilpG~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~ 94 (201)
T 1gpw_B 41 DLYDLLFIPGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEES 94 (201)
T ss_dssp SCCSEEEECCCSCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEE
T ss_pred cCCCEEEECCCCcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhh
Confidence 579999999963321 11 1112377899999999999999999999999874
No 54
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=97.44 E-value=1.4e-05 Score=62.28 Aligned_cols=47 Identities=19% Similarity=0.365 Sum_probs=29.4
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||.+...-...+ .+.+...++++|+.+||.|.++|+.+
T Consensus 66 ~~~dglil~Gg~~~~~~~~~~---~~~~~~~~~~~PilGIC~G~Qll~~~ 112 (218)
T 2vpi_A 66 QGFRAIIISGGPNSVYAEDAP---WFDPAIFTIGKPVLGICYGMQMMNKV 112 (218)
T ss_dssp HTCSEEEEEC---------CC---CCCGGGGTSSCCEEEETHHHHHHHHH
T ss_pred cCCCEEEECCCCcccccccch---hHHHHHHHcCCCEEEEcHHHHHHHHH
Confidence 469999999997532111111 12234457899999999999999985
No 55
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=97.40 E-value=0.0002 Score=57.57 Aligned_cols=46 Identities=15% Similarity=0.181 Sum_probs=38.6
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHh
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 108 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~ 108 (195)
.++|.||+|||++... .+...++++++.++++|+.+||.|.++|+.
T Consensus 66 ~~~dgiil~GG~~~~~---~~~~~~~i~~~~~~~~PilGIC~G~Qll~~ 111 (273)
T 2w7t_A 66 LGCDGIFVPGGFGNRG---VDGKCAAAQVARMNNIPYFGVXLGMQVAVI 111 (273)
T ss_dssp HTCSEEEECCCCTTTT---HHHHHHHHHHHHHHTCCEEEETHHHHHHHH
T ss_pred hhCCEEEecCCCCCcC---chhHHHHHHHHHHCCCcEEEECcCHHHHHH
Confidence 4689999999976532 235778899999999999999999999986
No 56
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=97.35 E-value=0.00011 Score=60.38 Aligned_cols=50 Identities=18% Similarity=0.300 Sum_probs=36.0
Q ss_pred CCcCEEEEcCCCC-hhh--h-ccChHHHHHHHHHHhCC--CeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRA-PEY--L-AMNDSVIDLVRKFSNSG--KTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~-~~~--l-~~~~~l~~~l~~~~~~~--k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||.+ +.. + .....+.+.++++.+++ +||.+||.|.++|+.+
T Consensus 85 ~~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a 140 (315)
T 1l9x_A 85 KSINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLL 140 (315)
T ss_dssp HHSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHH
T ss_pred hcCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHH
Confidence 3689999999974 211 1 01135677777776664 9999999999999875
No 57
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=97.33 E-value=0.00024 Score=62.70 Aligned_cols=56 Identities=20% Similarity=0.321 Sum_probs=37.7
Q ss_pred CCCCCCCCcCEEEEcCCCChhhhccChHH-HHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 54 FDEIDPTKYDGLVIPGGRAPEYLAMNDSV-IDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 54 ~~~~~~~~~D~livpGG~~~~~l~~~~~l-~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
++++...++|.||+|||++.......+.+ ..+++.+.++++|+.+||.|.++|+.+
T Consensus 43 ~~~i~~~~~dgIIlsGGp~s~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~ 99 (556)
T 3uow_A 43 LKDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQ 99 (556)
T ss_dssp GGGTTTSCEEEEEECCCSCCTTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred HHHHhhcCCCEEEECCCCCcccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHH
Confidence 33333347899999999864221112222 244555667899999999999999986
No 58
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=97.18 E-value=0.00017 Score=55.71 Aligned_cols=50 Identities=18% Similarity=0.143 Sum_probs=40.9
Q ss_pred CCcCEEEEcCCCCh--hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAP--EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~--~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.+.|+|++|||... ........+.+.|++++++|++++++|.|+.+|++.
T Consensus 78 ~~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~~~ 129 (206)
T 3l4e_A 78 RKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPN 129 (206)
T ss_dssp HHSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTSSB
T ss_pred HhCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhccc
Confidence 45899999998643 223456678999999999999999999999999753
No 59
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=97.17 E-value=0.00015 Score=56.85 Aligned_cols=51 Identities=10% Similarity=0.119 Sum_probs=41.1
Q ss_pred CCcCEEEEcCCCChh--hhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCC
Q 029299 60 TKYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAAD 110 (195)
Q Consensus 60 ~~~D~livpGG~~~~--~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aG 110 (195)
.+.|+||+|||.... .......+.+.|++++++|+|++++|.|+.+|++..
T Consensus 78 ~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~~~~ 130 (229)
T 1fy2_A 78 EKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTI 130 (229)
T ss_dssp HHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTSSBS
T ss_pred hcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhcccc
Confidence 458999999986432 233455688999999999999999999999998753
No 60
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=97.04 E-value=0.00085 Score=58.49 Aligned_cols=48 Identities=13% Similarity=0.235 Sum_probs=40.8
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
..++|.|++|||+|... .....++|+.+.++++|+.+||.|.++|+.+
T Consensus 348 L~~~DgIIlpGG~G~~~---~~g~i~~ir~a~~~~~PiLGIClG~Qll~va 395 (535)
T 3nva_A 348 LGNVNGIIVLPGFGSRG---AEGKIKAIKYAREHNIPFLGICFGFQLSIVE 395 (535)
T ss_dssp TTSCSEEEECCCCSSTT---HHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ccCCCEEEECCCCCCcc---HHHHHHHHHHHHHcCCcEEEECcchhHHHHH
Confidence 46899999999987532 3567889999999999999999999998765
No 61
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=96.92 E-value=0.00062 Score=59.72 Aligned_cols=47 Identities=17% Similarity=0.258 Sum_probs=32.2
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||++... +.......+..++.++||.+||.|.++|+.+
T Consensus 52 ~~~dgIILsGGp~sv~---~~~~~~~~~~~~~~~~PvLGIC~G~Qlla~~ 98 (527)
T 3tqi_A 52 FNPHGIILSGGPETVT---LSHTLRAPAFIFEIGCPVLGICYGMQTMAYQ 98 (527)
T ss_dssp TCCSEEEECCCCC------------CCCSTTTSSSCEEEETHHHHHHHHH
T ss_pred cCCCEEEECCcCcccc---cCCChhhHHHHHhcCCCEEEEChHHHHHHHH
Confidence 3579999999976321 1222334456678899999999999999976
No 62
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=96.86 E-value=0.0014 Score=57.57 Aligned_cols=47 Identities=17% Similarity=0.318 Sum_probs=39.2
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||+|.... +...++++.+.++++|+.+||.|.++|+.+
T Consensus 354 ~~~DGIILpGGfGd~~~---~g~i~~ir~a~e~~iPiLGICLGmQlL~~a 400 (550)
T 1vco_A 354 RDVSGILVPGGFGVRGI---EGKVRAAQYARERKIPYLGICLGLQIAVIE 400 (550)
T ss_dssp TTCSCEEECCCCSSTTH---HHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hcCCEEEECCCCCCcch---hhhHHHHHHHHHCCCcEEEECcCHHHHHHH
Confidence 57999999999875422 346688898888999999999999999865
No 63
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=96.85 E-value=0.00087 Score=59.14 Aligned_cols=50 Identities=26% Similarity=0.310 Sum_probs=38.4
Q ss_pred CCcCEEEEcCCCChhh---hccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEY---LAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~---l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|.||+|||..+.. ...+..+.++|+++.++++|+.+||.|.++|+.+
T Consensus 43 ~~~DglILpGgG~~~~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a 95 (555)
T 1jvn_A 43 SGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAG 95 (555)
T ss_dssp TTCSCEEEEECSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEE
T ss_pred ccCCEEEECCCCchHhHhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhh
Confidence 4799999999533211 1122346789999999999999999999999986
No 64
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=96.85 E-value=0.0018 Score=56.96 Aligned_cols=48 Identities=19% Similarity=0.287 Sum_probs=40.0
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
..++|.||+|||+|... .....++++++.++++|+.+||.|.++|+.+
T Consensus 341 l~~~DGIilsGGpg~~~---~~g~~~~i~~a~~~~~PiLGIClG~Qll~va 388 (545)
T 1s1m_A 341 LKGLDAILVPGGFGYRG---VEGMITTARFARENNIPYLGICLGMQVALID 388 (545)
T ss_dssp TTTCSEEEECCCCSSTT---HHHHHHHHHHHHHTTCCEEEETHHHHHHHHH
T ss_pred hhcCCEEEECCCCCCcc---chhhHHHHHHHHHCCCcEEEECChHHHHHHH
Confidence 35799999999987542 2457788999999999999999999999863
No 65
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=96.83 E-value=0.0015 Score=49.45 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=30.9
Q ss_pred cCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 62 YDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 62 ~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.|.+|+.||.+... +......+++ ..++++|+.+||.|.++|+.+
T Consensus 48 ~~~iil~gGpg~~~--~~~~~~~l~~-~~~~~~PilGIC~G~Qll~~~ 92 (192)
T 1i1q_B 48 NPVLMLSPGPGVPS--EAGCMPELLT-RLRGKLPIIGICLGHQAIVEA 92 (192)
T ss_dssp SEEEEECCCSSCGG--GSTTHHHHHH-HHBTTBCEEEETHHHHHHHHH
T ss_pred CCeEEECCCCcCch--hCchHHHHHH-HHhcCCCEEEECcChHHHHHH
Confidence 44577777776432 1223344444 467899999999999999986
No 66
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=96.81 E-value=0.0019 Score=57.98 Aligned_cols=51 Identities=24% Similarity=0.377 Sum_probs=40.3
Q ss_pred CCCcCEEEEcCCCChhhhccC---hHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 59 PTKYDGLVIPGGRAPEYLAMN---DSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~---~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
..++|.|||+||++...-..+ ..+.++|+++.+.++|+.+||-|.++|+.+
T Consensus 484 ~~~~DgIIlsGGPg~p~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~a 537 (645)
T 3r75_A 484 LARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAI 537 (645)
T ss_dssp GGGCSEEEECCCSSCTTCTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHH
T ss_pred ccCCCEEEECCCCCChhhhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
Confidence 457999999999874321122 246788999999999999999999999975
No 67
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=96.24 E-value=0.0048 Score=50.51 Aligned_cols=56 Identities=18% Similarity=0.288 Sum_probs=42.2
Q ss_pred CCCCCCCCCcCEEEEcCCCC-h---hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHh
Q 029299 53 TFDEIDPTKYDGLVIPGGRA-P---EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 108 (195)
Q Consensus 53 ~~~~~~~~~~D~livpGG~~-~---~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~ 108 (195)
++.+++..+||++||-|++- . +....-+++.++++...++++++.+||-|.++++.
T Consensus 103 ~f~~~~~~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~ 162 (312)
T 2h2w_A 103 TFSAVKDRKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLY 162 (312)
T ss_dssp CGGGTTTCCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHH
T ss_pred CcccccccCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHH
Confidence 35555557899999999973 2 22222367888999888999999999999999444
No 68
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=96.20 E-value=0.0012 Score=57.90 Aligned_cols=46 Identities=15% Similarity=0.312 Sum_probs=32.3
Q ss_pred CcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 61 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 61 ~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.+|.||+|||++...-...+.+ .+...+.++||.+||.|.++|+.+
T Consensus 50 ~~dgiILsGGp~s~~~~~~~~~---~~~~~~~g~PvLGIC~G~Qlla~~ 95 (525)
T 1gpm_A 50 NPSGIILSGGPESTTEENSPRA---PQYVFEAGVPVFGVCYGMQTMAMQ 95 (525)
T ss_dssp CCSEEEECCCSSCTTSTTCCCC---CGGGGTSSSCEEEETHHHHHHHHH
T ss_pred CCCEEEECCcCccccccCCcch---HHHHHHCCCCEEEEChHHHHHHHH
Confidence 4699999999753211111222 244567899999999999999985
No 69
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=96.13 E-value=0.0021 Score=56.05 Aligned_cols=46 Identities=22% Similarity=0.371 Sum_probs=32.3
Q ss_pred CcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 61 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 61 ~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.+|.||++||++...-...+.+ .+...+.++||.+||.|.++|+.+
T Consensus 42 ~~dgiIlsGGp~s~~~~~~~~~---~~~~~~~~~PvLGIC~G~Qlla~~ 87 (503)
T 2ywb_A 42 RPQALILSGGPRSVFDPDAPRP---DPRLFSSGLPLLGICYGMQLLAQE 87 (503)
T ss_dssp CCSEEEECCCSSCSSCTTCCCC---CGGGGCSSCCEEEETHHHHHHHHT
T ss_pred CCCEEEECCCCchhccCCCcch---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 4699999999763211111111 244567899999999999999986
No 70
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=95.81 E-value=0.0046 Score=50.40 Aligned_cols=51 Identities=20% Similarity=0.318 Sum_probs=39.3
Q ss_pred CCCCcCEEEEcCCCC-h---hhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHh
Q 029299 58 DPTKYDGLVIPGGRA-P---EYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAA 108 (195)
Q Consensus 58 ~~~~~D~livpGG~~-~---~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~ 108 (195)
+..+||++||-|++- . +....-+++.++++...++++++.+||-|.++++.
T Consensus 96 ~~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~ 150 (301)
T 2vdj_A 96 ENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLY 150 (301)
T ss_dssp TTSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHH
T ss_pred cccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHH
Confidence 346899999999973 2 12222367888999888999999999999999443
No 71
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=95.69 E-value=0.0016 Score=58.89 Aligned_cols=47 Identities=19% Similarity=0.365 Sum_probs=31.1
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHHhC
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILAAA 109 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~a 109 (195)
.++|+||++||++...-...+.+ .+...+.++||.+||.|.++|+.+
T Consensus 71 ~~~dGIILsGGp~s~~~~~~~~~---~~~i~~~g~PvLGIC~G~QlLa~~ 117 (697)
T 2vxo_A 71 QGFRAIIISGGPNSVYAEDAPWF---DPAIFTIGKPVLGICYGMQMMNKV 117 (697)
T ss_dssp HTCSEEEEEECC-------CCCC---CGGGTTSSCCEEEEEHHHHHHHHH
T ss_pred cCCCEEEECCCCCcccCccchhH---HHHHHhCCCCEEEECHHHHHHHHH
Confidence 46899999999863211111111 233457899999999999999985
No 72
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=94.30 E-value=0.027 Score=45.57 Aligned_cols=49 Identities=18% Similarity=0.407 Sum_probs=40.3
Q ss_pred CCcCEEEEcCCCChh--hhccChHHHHHHHHHHhCC-CeEEEecHHHHHHHh
Q 029299 60 TKYDGLVIPGGRAPE--YLAMNDSVIDLVRKFSNSG-KTIASICHGQLILAA 108 (195)
Q Consensus 60 ~~~D~livpGG~~~~--~l~~~~~l~~~l~~~~~~~-k~i~aic~G~~lLa~ 108 (195)
.+.|+|+|+||.-.. .......+.+.|++.+++| .++++.|.|+.+++.
T Consensus 109 ~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~~ 160 (291)
T 3en0_A 109 EQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMGH 160 (291)
T ss_dssp HHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTSS
T ss_pred hcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhhH
Confidence 468999999997542 2346778999999999999 899999999998753
No 73
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=81.54 E-value=2.7 Score=33.14 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=27.4
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEec
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASIC 100 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic 100 (195)
..+||+||++-- .... -++...+.|+++.++|.-++.+.
T Consensus 48 L~~yDvIIl~d~-~~~~--l~~~~~~~L~~yV~~GGgLi~~g 86 (259)
T 3rht_A 48 LAKQDLVILSDY-PAER--MTAQAIDQLVTMVKAGCGLVMLG 86 (259)
T ss_dssp HHTCSEEEEESC-CGGG--BCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HhcCCEEEEcCC-cccc--CCHHHHHHHHHHHHhCCeEEEec
Confidence 358999999742 2222 36677888888888887776663
No 74
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=80.38 E-value=5.3 Score=35.82 Aligned_cols=59 Identities=20% Similarity=0.350 Sum_probs=41.8
Q ss_pred hHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChHHH
Q 029299 4 FQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVI 83 (195)
Q Consensus 4 ~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~l~ 83 (195)
|..|.+.|+.|+++++.. +..+|++||+|.-. .-++++.
T Consensus 431 y~aL~~~gi~vD~v~~~~------------------------------------dL~~Yklvv~P~~~-----~~~~~~~ 469 (675)
T 3tty_A 431 YDALYKQNIQTDMISVEE------------------------------------DLSKYKVVIAPVMY-----MVKPGFA 469 (675)
T ss_dssp HHHHHTTTCCEEEECTTS------------------------------------CCTTCSEEEETTCC-----BCCTTHH
T ss_pred HHHHHHcCceEEEecCcC------------------------------------CcccCCEEEEeccE-----ecCHHHH
Confidence 667788888888887741 13579999999753 2367788
Q ss_pred HHHHHHHhCCCe-EEEecHHH
Q 029299 84 DLVRKFSNSGKT-IASICHGQ 103 (195)
Q Consensus 84 ~~l~~~~~~~k~-i~aic~G~ 103 (195)
+.|+++.++|.. |++-.+|.
T Consensus 470 ~~L~~yV~~GG~lv~t~~sG~ 490 (675)
T 3tty_A 470 ERVERFVAQGGTFVTTFFSGI 490 (675)
T ss_dssp HHHHHHHHTTCEEEEETTCSC
T ss_pred HHHHHHHhcCCEEEEEccCCc
Confidence 889999887665 55544443
No 75
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=76.20 E-value=4.9 Score=31.39 Aligned_cols=43 Identities=23% Similarity=0.267 Sum_probs=31.0
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHH
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 103 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~ 103 (195)
+.+||+||+-|-..... -+++..+-|+++.++|+-++++-+|.
T Consensus 65 L~~~DvvV~~~~~~~~~--l~~~~~~al~~~V~~GgG~vgiH~a~ 107 (252)
T 1t0b_A 65 LDRCDVLVWWGHIAHDE--VKDEVVERVHRRVLEGMGLIVLHSGH 107 (252)
T ss_dssp HHTCSEEEEECSSCGGG--SCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred HhcCCEEEEecCCCCCc--CCHHHHHHHHHHHHcCCCEEEEcccC
Confidence 35799999854211122 36777888999999999999997764
No 76
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=72.93 E-value=1.1 Score=32.59 Aligned_cols=51 Identities=24% Similarity=0.279 Sum_probs=38.1
Q ss_pred CCcCEEEEcCCCChhhh-ccChHHHHHHHHHHhCCCeEEEecHHHHHHHhCCC
Q 029299 60 TKYDGLVIPGGRAPEYL-AMNDSVIDLVRKFSNSGKTIASICHGQLILAAADV 111 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l-~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa~aGl 111 (195)
.+.|+|++-||...... ...+++.++|.+..+.++.|.++|- .-++.++|.
T Consensus 83 ~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCF-ms~F~kagW 134 (157)
T 2r47_A 83 GNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCY-MDMFARAGW 134 (157)
T ss_dssp CCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEE-TTHHHHTTH
T ss_pred CCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEh-HHHHHHcCC
Confidence 37899999999764333 2445788889888777777999998 446778773
No 77
>2zuv_A Lacto-N-biose phosphorylase; beta-alpha-barrel, TIM barrel, glycosyltransferase, transferase; HET: NDG; 1.85A {Bifidobacterium longum} PDB: 2zus_A* 2zuu_A* 2zut_A* 2zuw_A*
Probab=72.32 E-value=4.9 Score=36.17 Aligned_cols=42 Identities=14% Similarity=0.282 Sum_probs=32.4
Q ss_pred CCCcCEEEEcCCC-----ChhhhccChHHHHHHHHHHhCCCeEEEecH
Q 029299 59 PTKYDGLVIPGGR-----APEYLAMNDSVIDLVRKFSNSGKTIASICH 101 (195)
Q Consensus 59 ~~~~D~livpGG~-----~~~~l~~~~~l~~~l~~~~~~~k~i~aic~ 101 (195)
+++||+||-+|-. +.+ ...++...+.||++..+|.-+.+++.
T Consensus 498 L~d~DVIIn~G~A~TalSgg~-~W~~p~~~~aLR~fV~~GGgLIgVGe 544 (759)
T 2zuv_A 498 DSDIDVIINGGPVDTAFTGGD-VWTNPKLVETVRAWVRGGGAFVGVGE 544 (759)
T ss_dssp CTTCCEEEEEECTTSTTTCGG-GGGCHHHHHHHHHHHHTTCEEEEEES
T ss_pred cccCCEEEecCcchhcccCcc-ccCCHHHHHHHHHHHHcCCcEEEeCC
Confidence 4689999999832 222 23469999999999999988887765
No 78
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=71.36 E-value=21 Score=28.24 Aligned_cols=41 Identities=7% Similarity=0.118 Sum_probs=30.1
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHH
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQ 103 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~ 103 (195)
+.+||+||+-- .+ . .-+++..+-|+++.++|+.++++.++.
T Consensus 56 L~~~D~vV~~~-~~-~--~l~~~~~~~l~~yV~~Ggglv~~H~a~ 96 (281)
T 4e5v_A 56 FSPYQLVVLDY-NG-D--SWPEETNRRFLEYVQNGGGVVIYHAAD 96 (281)
T ss_dssp CTTCSEEEECC-CS-S--CCCHHHHHHHHHHHHTTCEEEEEGGGG
T ss_pred hhcCCEEEEeC-CC-C--cCCHHHHHHHHHHHHcCCCEEEEeccc
Confidence 46899999632 22 1 125678888888999999999988764
No 79
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=65.79 E-value=9.4 Score=33.84 Aligned_cols=57 Identities=23% Similarity=0.405 Sum_probs=42.5
Q ss_pred hHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChHHH
Q 029299 4 FQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVI 83 (195)
Q Consensus 4 ~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~l~ 83 (195)
|..|.+.|+.|+++++.. +..+|++||+|.-. .-++.+.
T Consensus 431 y~al~~~g~~vd~v~~~~------------------------------------~l~~y~lvv~P~~~-----~~~~~~~ 469 (645)
T 1kwg_A 431 YSALRRLGLDVDVVPPGA------------------------------------SLRGYAFAVVPSLP-----IVREEAL 469 (645)
T ss_dssp HHHHHTTTCCEEEECTTS------------------------------------CCTTCSEEEESCCS-----SCCHHHH
T ss_pred HHHHHHhCCCeeEECCCC------------------------------------CcccCCEEEEechh-----hcCHHHH
Confidence 677888889998888851 12579999999854 2356777
Q ss_pred HHHHHHHhCCCeEEEecHHH
Q 029299 84 DLVRKFSNSGKTIASICHGQ 103 (195)
Q Consensus 84 ~~l~~~~~~~k~i~aic~G~ 103 (195)
+.|++ +.|.+|++-.+|.
T Consensus 470 ~~L~~--~GG~lv~~~~sg~ 487 (645)
T 1kwg_A 470 EAFRE--AEGPVLFGPRSGS 487 (645)
T ss_dssp HHHHT--CSSCEEECTTTTC
T ss_pred HHHHh--CCCEEEEeccCCc
Confidence 88877 7788888877765
No 80
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=56.74 E-value=7.9 Score=26.50 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=25.2
Q ss_pred CCcCEEEEcCC-CChhhhccChHHHHHHHHHHh--CCCeEEEecHH
Q 029299 60 TKYDGLVIPGG-RAPEYLAMNDSVIDLVRKFSN--SGKTIASICHG 102 (195)
Q Consensus 60 ~~~D~livpGG-~~~~~l~~~~~l~~~l~~~~~--~~k~i~aic~G 102 (195)
.++|.|++... ++... ..+..+..|+.+... ++|+++.++++
T Consensus 44 ~~~d~iiig~pty~~g~-~p~~~~~~fl~~l~~~l~~k~~~~f~t~ 88 (138)
T 5nul_A 44 LNEDILILGCSAMTDEV-LEESEFEPFIEEISTKISGKKVALFGSY 88 (138)
T ss_dssp TTCSEEEEEECCBTTTB-CCTTTHHHHHHHHGGGCTTCEEEEEEEE
T ss_pred hhCCEEEEEcCccCCCC-CChHHHHHHHHHHHhhcCCCEEEEEEec
Confidence 57998888543 11111 111157778777664 68888887753
No 81
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=47.60 E-value=14 Score=28.65 Aligned_cols=41 Identities=15% Similarity=0.325 Sum_probs=28.8
Q ss_pred CCCcCEEEEcCCCChhhhc------cC----hHHHHHHHHHHhCCCeEEEec
Q 029299 59 PTKYDGLVIPGGRAPEYLA------MN----DSVIDLVRKFSNSGKTIASIC 100 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~------~~----~~l~~~l~~~~~~~k~i~aic 100 (195)
..+||+||+.+... ..+. .+ +...+.|+++.++|.-+..+.
T Consensus 75 L~~yDvIIl~~~~~-~~l~~~~~~~~~~~~~~~~~~~l~~~V~~GGgll~ig 125 (256)
T 2gk3_A 75 LNRYDVIVISDIGS-NTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIG 125 (256)
T ss_dssp HHTCSEEEEESCCH-HHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HhcCCEEEEeCCch-hhcccccccccccccChHHHHHHHHHHHhCCEEEEEC
Confidence 35799999987432 1111 11 667899999999999888883
No 82
>3soz_A ORF 245 protein, cytoplasmic protein STM1381; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.60A {Salmonella enterica subsp}
Probab=47.45 E-value=19 Score=28.01 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=27.2
Q ss_pred CCCcCEEEEcCCCChhhhc----------cChHHHHHHHHHHhCCCeEEEec
Q 029299 59 PTKYDGLVIPGGRAPEYLA----------MNDSVIDLVRKFSNSGKTIASIC 100 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~----------~~~~l~~~l~~~~~~~k~i~aic 100 (195)
..+||+||+.. .+...+. ..+.-.+.|+++.++|.-+..+.
T Consensus 68 L~~yDvIIl~d-~~~~~~l~~~~~~~~~~~~~~~~~~l~~~V~~GGgLi~~g 118 (248)
T 3soz_A 68 LACYDAIVISD-IGSNTFLLQNRTFYNMDIIPDALQLIADYVAEGGGLLMIG 118 (248)
T ss_dssp HHTCSEEEEES-CCHHHHHSCHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred HhcCCEEEEcC-CCcchhccCccccccccCCHHHHHHHHHHHHhCCEEEEEc
Confidence 36899999973 3433221 13445889999999888777663
No 83
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=43.62 E-value=35 Score=23.33 Aligned_cols=42 Identities=26% Similarity=0.530 Sum_probs=23.7
Q ss_pred CcCEEEEcCC-CChhhhccChHHHHHHHHHHh---CCCeEEEecHH
Q 029299 61 KYDGLVIPGG-RAPEYLAMNDSVIDLVRKFSN---SGKTIASICHG 102 (195)
Q Consensus 61 ~~D~livpGG-~~~~~l~~~~~l~~~l~~~~~---~~k~i~aic~G 102 (195)
++|.||+... ++...=.-.+.+.+++.+... +++.++.+++|
T Consensus 49 ~~d~ii~g~pty~~~~G~~p~~~~~fl~~l~~~~l~~k~~~vfg~G 94 (148)
T 3f6r_A 49 GYDAVLFGCSAWGMEDLEMQDDFLSLFEEFDRIGLAGRKVAAFASG 94 (148)
T ss_dssp TCSEEEEEECEECSSSCEECHHHHHHHTTGGGTCCTTCEEEEEEEE
T ss_pred cCCEEEEEecccCCCCCCCcHHHHHHHHHhhccCCCCCEEEEEEeC
Confidence 7898888542 221000124567777766543 57777777664
No 84
>3klb_A Putative flavoprotein; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: FMN; 1.75A {Bacteroides fragilis nctc 9343}
Probab=38.46 E-value=16 Score=26.05 Aligned_cols=41 Identities=15% Similarity=0.215 Sum_probs=26.2
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecH
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 101 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~ 101 (195)
..+||.||+.. +-.. -.-.+.+..||.+..-++|+++.+|+
T Consensus 76 l~~yd~iilG~-P~~~-g~~~~~~~~fl~~~~l~gk~v~~f~t 116 (162)
T 3klb_A 76 PEKYEVLFVGF-PVWW-YIAPTIINTFLESYDFAGKIVVPFAT 116 (162)
T ss_dssp GGGCSEEEEEE-ECBT-TBCCHHHHHHHHTSCCTTCEEEEEEE
T ss_pred hhhCCEEEEEc-cccc-CCCCHHHHHHHHhcCCCCCEEEEEEE
Confidence 46899998843 2111 12356788888876556777776665
No 85
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=37.64 E-value=20 Score=25.77 Aligned_cols=41 Identities=17% Similarity=0.054 Sum_probs=26.6
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecH
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 101 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~ 101 (195)
..+||.||+... -.. -...+.+..||.+..-++|.++.+|+
T Consensus 85 l~~yD~iilg~P-vy~-g~~~~~~~~fl~~~~l~gk~v~~f~t 125 (171)
T 4ici_A 85 IGTYDVVFIGYP-IWW-DLAPRIINTFIEGHSLKGKTVVPFAT 125 (171)
T ss_dssp GGGCSEEEEEEE-CBT-TBCCHHHHHHHHHSCCTTSEEEEEEE
T ss_pred HhHCCEEEEecc-ccc-CCchHHHHHHHHHcCCCcCEEEEEEe
Confidence 468999988432 111 12356788899887556777776665
No 86
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=35.38 E-value=55 Score=24.89 Aligned_cols=72 Identities=11% Similarity=0.196 Sum_probs=39.4
Q ss_pred HHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCCCChhhhccChHHHH
Q 029299 5 QALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGGRAPEYLAMNDSVID 84 (195)
Q Consensus 5 ~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG~~~~~l~~~~~l~~ 84 (195)
..|.++|++|.+++|.-.+ .+ +......++.+. ...+...+..++|+||..- .++++..
T Consensus 48 ~~Ll~~GA~VtVvap~~~~------~l------~~l~~~~~i~~i-~~~~~~~dL~~adLVIaAT--------~d~~~N~ 106 (223)
T 3dfz_A 48 KGFLQEGAAITVVAPTVSA------EI------NEWEAKGQLRVK-RKKVGEEDLLNVFFIVVAT--------NDQAVNK 106 (223)
T ss_dssp HHHGGGCCCEEEECSSCCH------HH------HHHHHTTSCEEE-CSCCCGGGSSSCSEEEECC--------CCTHHHH
T ss_pred HHHHHCCCEEEEECCCCCH------HH------HHHHHcCCcEEE-ECCCCHhHhCCCCEEEECC--------CCHHHHH
Confidence 4678899999999996321 00 011112223322 2233333346789888753 3456666
Q ss_pred HHHHHHhCCCeEE
Q 029299 85 LVRKFSNSGKTIA 97 (195)
Q Consensus 85 ~l~~~~~~~k~i~ 97 (195)
.+.+..+++.+|-
T Consensus 107 ~I~~~ak~gi~VN 119 (223)
T 3dfz_A 107 FVKQHIKNDQLVN 119 (223)
T ss_dssp HHHHHSCTTCEEE
T ss_pred HHHHHHhCCCEEE
Confidence 6766666555543
No 87
>1l1s_A Hypothetical protein MTH1491; structural genomics, PSI, protein STRU initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.114.1.1
Probab=32.96 E-value=54 Score=21.55 Aligned_cols=43 Identities=14% Similarity=0.102 Sum_probs=32.7
Q ss_pred CcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHH
Q 029299 61 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQL 104 (195)
Q Consensus 61 ~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~ 104 (195)
+.|+.+|.-|.+...+..+..+.+.|++..++|. -..+|.-++
T Consensus 34 ~~~i~vv~~G~av~~~~~~~~~~~~i~~L~~~gV-~~~~C~~~l 76 (113)
T 1l1s_A 34 SVRIEVVAYSMGVNVLRRDSEYSGDVSELTGQGV-RFCACSNTL 76 (113)
T ss_dssp SEEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTC-EEEEEHHHH
T ss_pred CCcEEEEEechHHHHHHcCChHHHHHHHHHHCCC-EEEecHHHH
Confidence 5889999888887666666778889998887764 555787663
No 88
>3edo_A Flavoprotein, putative Trp repressor binding protein; YP_193882.1, flavoprotein in complex with FMN, structural genomics; HET: MSE FMN; 1.20A {Lactobacillus acidophilus ncfm}
Probab=31.62 E-value=28 Score=24.31 Aligned_cols=41 Identities=15% Similarity=0.126 Sum_probs=23.2
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHh-CCCeEEEecH
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSN-SGKTIASICH 101 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~-~~k~i~aic~ 101 (195)
..+||.||+... -. .-.-.+.+..||.+... ++|+++..++
T Consensus 74 l~~~d~iilG~P-~~-~g~~~~~~~~fl~~~~~~~~k~~~~~t~ 115 (151)
T 3edo_A 74 YNNYDLILIGSP-VW-SGYPATPIKTLLDQMKNYRGEVASFFTS 115 (151)
T ss_dssp GGGCSEEEEEEE-EE-TTEECTHHHHHHHHTTTCCSEEEEEEEC
T ss_pred HhhCCEEEEEcc-ee-cccccHHHHHHHHhchhcCCEEEEEEEe
Confidence 468999988432 11 11235678888887643 3444444443
No 89
>3i9v_6 NADH-quinone oxidoreductase subunit 6; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_6* 2fug_6* 3iam_6* 3ias_6* 3m9s_6*
Probab=31.13 E-value=44 Score=24.75 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=28.4
Q ss_pred CCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHH
Q 029299 59 PTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 102 (195)
Q Consensus 59 ~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G 102 (195)
+.+.|+++|-|..-. .....++.+.++.++-|+|.++++=
T Consensus 72 PrqaDiliVeG~Vt~----~m~~~l~~~~e~~p~pk~VIAvGsC 111 (181)
T 3i9v_6 72 PRQADVMIVAGRLSK----KMAPVMRRVWEQMPDPKWVISMGAC 111 (181)
T ss_dssp --CCCCEEEESCCBT----TTHHHHHHHHHSSCSSCCEEEEHHH
T ss_pred CCCceEEEEeccCCc----ccHHHHHHHHHHcCCCceEEEeecc
Confidence 467899999886422 2345677788888889999988763
No 90
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=27.27 E-value=88 Score=20.14 Aligned_cols=57 Identities=11% Similarity=0.122 Sum_probs=39.1
Q ss_pred CcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHHHHHHH---hCCCCCCceEe
Q 029299 61 KYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHGQLILA---AADVVKGRKCT 118 (195)
Q Consensus 61 ~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G~~lLa---~aGlL~g~~~T 118 (195)
+.|+.++.-|.+...+..+..+.+.|+.+.+.|. -..+|.-++-.- +..|++|-++.
T Consensus 29 ~~~v~vv~~g~gv~~~~~~~~~~~~i~~l~~~gV-~~~~C~~s~~~~gi~~~~L~~~v~vv 88 (108)
T 2pd2_A 29 DAEIEVVLHQSAIKALLKDSDTRSIIEDLIKKNI-LIVGCENSIRSQNLSHDQLIPGIKIV 88 (108)
T ss_dssp TCEEEEEECGGGGGGGBTTCTTHHHHHHHHHTTC-EEEEEHHHHHHTTCCGGGBCTTCEEE
T ss_pred CCeEEEEEcChHHHHHHcCchHHHHHHHHHHCcC-EEEecHHHHHHcCCCHHHcCCCCEEe
Confidence 6788899888887666666678889988888776 566787664321 22355555544
No 91
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=26.96 E-value=40 Score=22.67 Aligned_cols=37 Identities=24% Similarity=0.322 Sum_probs=26.2
Q ss_pred hHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHHHHHHH
Q 029299 124 KPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLF 165 (195)
Q Consensus 124 ~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~~~l~l 165 (195)
.+.+++.|..... .+++||+++.++...+-.+++.++
T Consensus 65 ~~~L~~~G~~~LP-----~~~VDGevv~~G~yPt~eEl~~~l 101 (106)
T 3ktb_A 65 NDFLQKHGADALP-----ITLVDGEIAVSQTYPTTKQMSEWT 101 (106)
T ss_dssp HHHHHTTCGGGCS-----EEEETTEEEECSSCCCHHHHHHHH
T ss_pred HHHHHHcCcccCC-----EEEECCEEEEeccCCCHHHHHHHh
Confidence 3455555544433 489999999999988888877654
No 92
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=26.43 E-value=44 Score=25.95 Aligned_cols=41 Identities=29% Similarity=0.606 Sum_probs=30.3
Q ss_pred hHHHHhCCCeEEEeCCCCCCCCCCCccccCCCCccccccccCcceeeccCCCCCCCCCcCEEEEcCC
Q 029299 4 FQALLAFGVSVDAACPGKKSGDVCPTAVHQSTGHQTYSETRGHNFALNATFDEIDPTKYDGLVIPGG 70 (195)
Q Consensus 4 ~~~l~~~G~~v~~~s~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~~~~~~~~~~~~~D~livpGG 70 (195)
...+++-|.+|+++|...+- + ..+++++++.+||-|+|...
T Consensus 27 ~~~~~~mgl~vd~is~k~~i----------------y----------~~~fd~vd~n~ydr~~vvn~ 67 (351)
T 1jg7_A 27 FKVISEMGLNVDIISLKNGV----------------Y----------TKSFDEVDVNDYDRLIVVNS 67 (351)
T ss_dssp HHHHHHTTCCEEEEESSCCS----------------S----------EEEGGGSCGGGCSEEEEECC
T ss_pred HHHHHHcCCCeeEEEeccce----------------e----------eeecccCCccccceEEEEec
Confidence 45688899999999986421 1 34577777889998888754
No 93
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=25.17 E-value=1.3e+02 Score=20.25 Aligned_cols=18 Identities=17% Similarity=0.047 Sum_probs=14.3
Q ss_pred hHHHHhCCCeEEEeCCCC
Q 029299 4 FQALLAFGVSVDAACPGK 21 (195)
Q Consensus 4 ~~~l~~~G~~v~~~s~~~ 21 (195)
+..|.+.||+|.-+.|..
T Consensus 24 ~~~L~~~g~~V~pVnP~~ 41 (122)
T 3ff4_A 24 AERLKSHGHEFIPVGRKK 41 (122)
T ss_dssp HHHHHHHTCCEEEESSSC
T ss_pred HHHHHHCCCeEEEECCCC
Confidence 566788899998888864
No 94
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=25.09 E-value=85 Score=20.73 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=24.7
Q ss_pred CCcCEEEEcCCCChhhhccChH--HHHHHHHHHh--CCCeEEEecH
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDS--VIDLVRKFSN--SGKTIASICH 101 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~--l~~~l~~~~~--~~k~i~aic~ 101 (195)
.++|.||+...- .. ....+. +..++.+... ++|+++.+++
T Consensus 45 ~~~d~vi~g~p~-y~-~~~~~~~~~~~fl~~l~~~l~~k~~~~~~t 88 (137)
T 2fz5_A 45 ASKDVILLGCPA-MG-SEELEDSVVEPFFTDLAPKLKGKKVGLFGS 88 (137)
T ss_dssp HTCSEEEEECCC-BT-TTBCCHHHHHHHHHHHGGGCSSCEEEEEEE
T ss_pred hcCCEEEEEccc-cC-CCCCCHHHHHHHHHHhhhhcCCCEEEEEEe
Confidence 478999885431 11 112344 7888877543 6788877774
No 95
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=22.80 E-value=1.4e+02 Score=20.91 Aligned_cols=38 Identities=11% Similarity=0.077 Sum_probs=29.5
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHH
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 102 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G 102 (195)
.+-|++|+....| +++++.+.++.+.++|.++.+|+.-
T Consensus 109 ~~~Dvvi~iS~sG-----~t~~~~~~~~~ak~~g~~vi~iT~~ 146 (188)
T 1tk9_A 109 NEKDVLIGISTSG-----KSPNVLEALKKAKELNMLCLGLSGK 146 (188)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3558888876543 5678899999999999999888763
No 96
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=21.72 E-value=1.5e+02 Score=21.10 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=29.6
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecH
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 101 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~ 101 (195)
.+-|++|+....| +++++.+.++.+.++|.++.+|+.
T Consensus 112 ~~~DvvI~iS~SG-----~t~~~i~~~~~ak~~g~~vI~IT~ 148 (199)
T 1x92_A 112 QPGDVLLAISTSG-----NSANVIQAIQAAHDREMLVVALTG 148 (199)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCEEEEEEC
Confidence 4568888877543 577889999999999999988876
No 97
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=21.33 E-value=1.6e+02 Score=20.89 Aligned_cols=37 Identities=14% Similarity=0.111 Sum_probs=28.6
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecH
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 101 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~ 101 (195)
.+-|++|+....| +.+++.+.++.+.++|.++.+|+.
T Consensus 115 ~~~d~vI~iS~SG-----~t~~~~~~~~~ak~~g~~vI~IT~ 151 (198)
T 2xbl_A 115 NEGDVLIGYSTSG-----KSPNILAAFREAKAKGMTCVGFTG 151 (198)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCeEEEEEC
Confidence 4558888876543 467788999999999999988876
No 98
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=21.15 E-value=66 Score=25.01 Aligned_cols=35 Identities=20% Similarity=0.343 Sum_probs=24.4
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecHH
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICHG 102 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~G 102 (195)
.++|+||+.||-|. +++.++.+...+.|+.+|-.|
T Consensus 62 ~~~D~vi~~GGDGT--------~l~a~~~~~~~~~P~lGI~~G 96 (292)
T 2an1_A 62 QQADLAVVVGGDGN--------MLGAARTLARYDINVIGINRG 96 (292)
T ss_dssp HHCSEEEECSCHHH--------HHHHHHHHTTSSCEEEEBCSS
T ss_pred cCCCEEEEEcCcHH--------HHHHHHHhhcCCCCEEEEECC
Confidence 35899999999664 444555555567888888544
No 99
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=21.05 E-value=1.2e+02 Score=21.89 Aligned_cols=39 Identities=8% Similarity=0.065 Sum_probs=32.1
Q ss_pred CCCCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecH
Q 029299 58 DPTKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 101 (195)
Q Consensus 58 ~~~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~ 101 (195)
+..+-|.++|..-. ..|+...+...+..++|.++.+||+
T Consensus 74 ~i~~~D~vii~S~S-----g~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 74 TLHAVDRVLIFTPD-----TERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CCCTTCEEEEEESC-----SCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEeCC-----CCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 34677988886533 3688899999999999999999998
No 100
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=21.00 E-value=85 Score=21.19 Aligned_cols=37 Identities=27% Similarity=0.482 Sum_probs=25.9
Q ss_pred hHHHHHCCCeeecCCCcceEEEcCCeEeCCCCCCHHHHHHHH
Q 029299 124 KPVLIAAGASWIEPETMAACVVDGNIITGATYEGHPEFIRLF 165 (195)
Q Consensus 124 ~~~l~~~g~~~~~~~~~~~~v~Dg~iiT~~g~~~~~~~~l~l 165 (195)
.+.+++.|..... .+++||+++.++...+-.+++.++
T Consensus 62 ~~~L~~~G~~~LP-----~~~VDGevv~~G~yPt~eEl~~~l 98 (110)
T 3kgk_A 62 KAFIEASGAEGLP-----LLLLDGETVMAGRYPKRAELARWF 98 (110)
T ss_dssp HHHHHHHCGGGCC-----EEEETTEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHcCcccCC-----EEEECCEEEEeccCCCHHHHHHHh
Confidence 3455555544433 489999999999888888777554
No 101
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=20.17 E-value=1.7e+02 Score=20.70 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=29.3
Q ss_pred CCcCEEEEcCCCChhhhccChHHHHHHHHHHhCCCeEEEecH
Q 029299 60 TKYDGLVIPGGRAPEYLAMNDSVIDLVRKFSNSGKTIASICH 101 (195)
Q Consensus 60 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~~k~i~aic~ 101 (195)
.+-|++|+....| +++++.+.++.+.++|.++.+|+.
T Consensus 108 ~~~DvvI~iS~SG-----~t~~~i~~~~~ak~~g~~vI~IT~ 144 (196)
T 2yva_A 108 HAGDVLLAISTRG-----NSRDIVKAVEAAVTRDMTIVALTG 144 (196)
T ss_dssp CTTCEEEEECSSS-----CCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEEeCCC-----CCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4568888876543 577889999999999999988876
Done!