BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029300
(195 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 253 bits (645), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/184 (79%), Positives = 171/184 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKAV+RLDGRVVDGREITVQFAKYGPNAE+I +GRI+E +S+ RSRSR
Sbjct: 61 FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPNAERIHKGRIIEPVPRSRNRSRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
SPR RYRD+++D+DYR+RSRS+S +R++RD+YR +ERD+RR+SRSRSASPD + GRG+
Sbjct: 121 SPRRRYRDDYKDRDYRKRSRSKSLDRHERDKYRGRERDYRRQSRSRSASPDYSRGRGRGR 180
Query: 181 YDEE 184
YD+E
Sbjct: 181 YDDE 184
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 167/188 (88%), Gaps = 7/188 (3%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI+DTYSLLVLN+TFRTTADDLFPLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIKDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKY DEAQKAV++LDGRVVDGREI V+FAKYGPNAE+I +GRI+E ++KGRSRSR
Sbjct: 61 FVRYKYQDEAQKAVEKLDGRVVDGREIMVRFAKYGPNAERIDKGRILEPVQRTKGRSRSR 120
Query: 121 SPRPRYRDEHRDKD----YRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNH 176
SPRPR+RD HRDKD R RSRSRS+ RYDRD+YR ++RD+R RSRSR SPD HK
Sbjct: 121 SPRPRHRD-HRDKDSRRRSRSRSRSRSKGRYDRDQYRGRDRDNRHRSRSR--SPDYHKGR 177
Query: 177 GRGKYDEE 184
GRGKYDE+
Sbjct: 178 GRGKYDED 185
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/192 (87%), Positives = 183/192 (95%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKAV++LDGR VDGREI VQFAKYGPNAE+I +GRI+E+SSKSKGRSRSR
Sbjct: 61 FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRIIETSSKSKGRSRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
SPRPR+RDE+RD+DYR+RSRSRSR R DRDRYR KERD RRRSRSRSASPD HK+ GRG+
Sbjct: 121 SPRPRHRDEYRDRDYRKRSRSRSRGRNDRDRYRGKERDSRRRSRSRSASPDHHKDRGRGR 180
Query: 181 YDEERRSRSRSY 192
YD+ERRSRSRSY
Sbjct: 181 YDDERRSRSRSY 192
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 154/196 (78%), Positives = 174/196 (88%), Gaps = 7/196 (3%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYA+EAQKAVDRLDGRVVDGREI VQFAKYGPNAE+I+ GRIVESSSK KGRSRSR
Sbjct: 61 FVRYKYAEEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIRSGRIVESSSKIKGRSRSR 120
Query: 121 SPRPRYRD----EHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNH 176
SPRPRYRD + +D+DYRRRSRSRS++RYDRD YR ++RD+ RS S SPD K +
Sbjct: 121 SPRPRYRDGYRDKDKDRDYRRRSRSRSKDRYDRDGYRGRDRDY--HPRSVSHSPDHRKEY 178
Query: 177 GRGKYDEERRSRSRSY 192
GRG +DE+R RS+S+
Sbjct: 179 GRG-HDEKRHRRSQSH 193
>gi|224066947|ref|XP_002302293.1| predicted protein [Populus trichocarpa]
gi|222844019|gb|EEE81566.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 144/180 (80%), Positives = 161/180 (89%), Gaps = 4/180 (2%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKAVDRLDGRVVDGREI VQFAKYGPNAE+I+ GRIVES+SK K RSRSR
Sbjct: 61 FVRYKYADEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIRDGRIVESTSKIKSRSRSR 120
Query: 121 SPRPRYRD--EHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGR 178
SPRP+Y D RD+DYRRRSRSRSR+R ++D YR +++D+ R RS S SPDR K+ GR
Sbjct: 121 SPRPKYWDGYRDRDRDYRRRSRSRSRDRSEQDGYRGRDKDYHR--RSVSCSPDRRKDRGR 178
>gi|148909922|gb|ABR18047.1| unknown [Picea sitchensis]
Length = 267
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/170 (75%), Positives = 148/170 (87%), Gaps = 5/170 (2%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRT+ADDLFPLF++YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK-GRSRS 119
F RYKYADEAQKAV+RLDG+ VDGR I VQFAKYGPNAE+IQ+GRI SS K K GRSRS
Sbjct: 61 FFRYKYADEAQKAVERLDGKNVDGRYIMVQFAKYGPNAERIQRGRITTSSPKPKAGRSRS 120
Query: 120 RSPRPRYRD--EHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRS 167
RSP PR+R+ ++RD++Y R R R+RY+RD YR K+RD+ RRS S+S
Sbjct: 121 RSPPPRHRNSSDNRDREYGR--RGSVRDRYERDEYRDKDRDYHRRSPSQS 168
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/184 (75%), Positives = 166/184 (90%), Gaps = 2/184 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKAV+RLDGR+VDGREITVQFAKYGPNAE+I +GRI+E+S +S+
Sbjct: 61 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSRRSRSRS 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
R R+RD+++D+DYRRRSRSRS +RY+RDR+R +++D+RRRSRSRSAS D +K GRG+
Sbjct: 121 P-RKRHRDDYKDRDYRRRSRSRSYDRYERDRHRGRDKDYRRRSRSRSASLD-YKGRGRGR 178
Query: 181 YDEE 184
YD+E
Sbjct: 179 YDDE 182
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 157/209 (75%), Gaps = 24/209 (11%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS G+ GPP +RD+YSLLVLN++FRTTADDL LF++ G+V+D+ IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKY DEAQKAVD+LDGR VDGR+I VQFAKYGPNAE+I +GRIVE SK +GRSRS
Sbjct: 61 FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSP 120
Query: 121 SPRPR---------YRDEHRDKDY------RRRSRSRSRERYDRDRYRSKERDHRRRSRS 165
SP+ R YRD++RD+ Y R RSRS ERY+R+RY +E+ +RR RS
Sbjct: 121 SPKRRYRADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERY--QEKGYRR--RS 176
Query: 166 RSASPD---RHKNHGRGKYDEERRSRSRS 191
RS SPD RH+ +GR + +ER RSRS
Sbjct: 177 RSISPDYDRRHRKNGRPR--DERSPRSRS 203
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/192 (72%), Positives = 161/192 (83%), Gaps = 4/192 (2%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDL PLFEKYG+VVD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKY DEAQKAVDRLDGRVVDGREI VQFAKYGPNAE+I +G+I+E+ +S+GRSRSR
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIHKGKIMETVPRSRGRSRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
SPR YRD++R++DYR+ SRSR R R R +ERD+RRRSRSRS +PD ++ GR
Sbjct: 121 SPRRGYRDDYRERDYRKWSRSRDRYG----RDRYRERDYRRRSRSRSYTPDDYRRRGRDS 176
Query: 181 YDEERRSRSRSY 192
RRS SRSY
Sbjct: 177 VSPARRSLSRSY 188
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/184 (75%), Positives = 166/184 (90%), Gaps = 1/184 (0%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAE+IQ+GRI+E+S +SK
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRS 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
+ R+RD++++KDYRRRSRSRS +R++RDR+R ++RDHRRRSRSRSASP +K GRG+
Sbjct: 121 PSKRRHRDDYKEKDYRRRSRSRSYDRHERDRHRGRDRDHRRRSRSRSASPG-YKGRGRGR 179
Query: 181 YDEE 184
+D+E
Sbjct: 180 HDDE 183
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/184 (75%), Positives = 166/184 (90%), Gaps = 1/184 (0%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAE+IQ+GRI+E+S +SK
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRS 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
+ R+RD++++KDYRRRSRSRS +R++RDR+R ++RDHRRRSRSRSASP +K GRG+
Sbjct: 121 PSKRRHRDDYKEKDYRRRSRSRSYDRHERDRHRGRDRDHRRRSRSRSASPG-YKGRGRGR 179
Query: 181 YDEE 184
+D+E
Sbjct: 180 HDDE 183
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/141 (81%), Positives = 131/141 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDL PLFEKYG+VVD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKY DEAQKAVDRLDGRVVDGREI VQFAKYGPNAE+I +G+I+E+ +S+GRSRSR
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIHKGKIMETVPRSRGRSRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRS 141
SPR YRD++R++DYR+RSRS
Sbjct: 121 SPRRGYRDDYRERDYRKRSRS 141
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/206 (61%), Positives = 153/206 (74%), Gaps = 19/206 (9%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS G+ GPP +RD+YSLLVLN++FRTTADDL LF++ G+V+D+ IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKY DEAQKAVD+LDGR VDGR+I VQFAKYGPNAE+I +GRIVE SK +GRSRS
Sbjct: 61 FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSP 120
Query: 121 SPRPR---------YRDEHRDKDY------RRRSRSRSRERYDRDRYRSKERDHRRRSRS 165
SP+ R YRD++RD+ Y R RSRS ERY+R+RY +E+ +RR RS
Sbjct: 121 SPKRRYRADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERY--QEKGYRR--RS 176
Query: 166 RSASPDRHKNHGRGKYDEERRSRSRS 191
RS SPD + H + +ER RSRS
Sbjct: 177 RSISPDYDRRHRKNGPRDERSPRSRS 202
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 139/184 (75%), Positives = 166/184 (90%), Gaps = 2/184 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKAV+RLDGR+VDGREITVQFAKYGPNAE+I +GRI+E+S +S+
Sbjct: 61 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSRRSRSRS 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
R R+RD++RD+DYRRRSRSRS +RY+RDR+R +++D+RRRSRSRSAS D +K GRG+
Sbjct: 121 P-RKRHRDDYRDRDYRRRSRSRSYDRYERDRHRGRDKDYRRRSRSRSASLD-YKGRGRGR 178
Query: 181 YDEE 184
YD+E
Sbjct: 179 YDDE 182
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/108 (90%), Positives = 103/108 (95%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
FVRYKY DEA KAV+RLDGRVVDGREITVQFAKYGPNAEKI +GR+VE
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVE 108
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 150/198 (75%), Gaps = 22/198 (11%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS G+ GPP +RD+YSLLVLN++FRTTADDL LF++ G+V+D+ IPRDRRTGDSRGFA
Sbjct: 1 MSRLGRYGPPAVRDSYSLLVLNVSFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKY DEAQKAVD+LDGR VDGR+I VQFAKYGPNAE+I +GRIVE SK +GRSRS
Sbjct: 61 FVRYKYEDEAQKAVDKLDGRTVDGRDIMVQFAKYGPNAERIHKGRIVEEISKPRGRSRSP 120
Query: 121 SPRPR---------YRDEHRDKDY------RRRSRSRSRERYDRDRYRSKERDHRRRSRS 165
SP+ R YRD++RD+ Y R RSRS ERY+R+RY +E+ +RR RS
Sbjct: 121 SPKRRYRADYRDRGYRDDYRDRHYRDDYQDREYRRSRSIERYERERY--QEKGYRR--RS 176
Query: 166 RSASPD---RHKNHGRGK 180
RS SPD RH+ +G+ +
Sbjct: 177 RSISPDYDRRHRKNGQSR 194
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/184 (75%), Positives = 166/184 (90%), Gaps = 2/184 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKAV+RLDGR+VDGREITVQFAKYGPNAE+I +GRI+E+S +S+
Sbjct: 61 FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSRRSRSRS 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGK 180
R R+RD++RD+DYRRRSRSRS +RY+RDR+R +++D+RRRSRSRSAS D +K GRG+
Sbjct: 121 P-RKRHRDDYRDRDYRRRSRSRSYDRYERDRHRGRDKDYRRRSRSRSASLD-YKGRGRGR 178
Query: 181 YDEE 184
YD+E
Sbjct: 179 YDDE 182
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/108 (90%), Positives = 103/108 (95%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
FVRYKY DEA KAV+RLDGRVVDGREITVQFAKYGPNAEKI +GR+VE
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVE 108
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 126/135 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKAV+RLDG +VDGREITVQFAKYGPNAE+I +G+I E+ KS+ RSRSR
Sbjct: 61 FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
Query: 121 SPRPRYRDEHRDKDY 135
SPR R+RDE+RDKDY
Sbjct: 121 SPRRRHRDEYRDKDY 135
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/108 (90%), Positives = 103/108 (95%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
FVRYKY DEA KAV+RLDGRVVDGREITVQFAKYGPNAEKI +GR+VE
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVE 108
>gi|225448281|ref|XP_002274860.1| PREDICTED: uncharacterized protein LOC100242306 [Vitis vinifera]
gi|296086805|emb|CBI32954.3| unnamed protein product [Vitis vinifera]
Length = 255
Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 108/112 (96%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI+DT+SLLVLNITFRTTADDLFP F+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIKDTFSLLVLNITFRTTADDLFPFFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKAVDRLDGR+VDGREITVQFAKYGPNAE+I +GRIVE+ K
Sbjct: 61 FVRYKYADEAQKAVDRLDGRIVDGREITVQFAKYGPNAERIHKGRIVETFPK 112
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 141/185 (76%), Positives = 167/185 (90%), Gaps = 2/185 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLN+TFRTTADDLFPLF+KYGKVVD+FIP+DRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNVTFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVES-SSKSKGRSRS 119
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAE+IQ+GRI+E+ RSRS
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIQKGRIIETSPRSKSSRSRS 120
Query: 120 RSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRG 179
S R R+RD++++KDYRRRSRSRS +R++RDR+R ++RDHRRRSRSRSASP +K GRG
Sbjct: 121 PSKRSRHRDDYKEKDYRRRSRSRSYDRHERDRHRGRDRDHRRRSRSRSASPG-YKGRGRG 179
Query: 180 KYDEE 184
++D+E
Sbjct: 180 RHDDE 184
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/185 (74%), Positives = 158/185 (85%), Gaps = 2/185 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAE+I +GRI+E+S +SK
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSKSSRSRS 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYD-RDRYRSKERDHRRRSRSRSASPDRHKNHGRG 179
R R+ D++RDK YRRRSRSRS +RY+ ++RD+RRRSRSRSASPD +K GRG
Sbjct: 121 PSRRRHHDDYRDKGYRRRSRSRSYDRYERDRYRGGRDRDYRRRSRSRSASPD-YKRRGRG 179
Query: 180 KYDEE 184
+YD+E
Sbjct: 180 RYDDE 184
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/108 (88%), Positives = 107/108 (99%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRTTADDL+PLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
FVRYKYADEAQKA+D+LDGR++DGREI VQFAKYGPNAEKI++GR++E
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVME 108
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 96/108 (88%), Positives = 107/108 (99%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDTYSLLVLNITFRTTADDL+PLF+KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
FVRYKYADEAQKA+D+LDGR++DGREI VQFAKYGPNAEKI++GR++E
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVME 108
>gi|388505176|gb|AFK40654.1| unknown [Medicago truncatula]
Length = 267
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/185 (73%), Positives = 157/185 (84%), Gaps = 2/185 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDI DTYSLLVLNITFRTTAD LFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADGLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAE+I +GRI+E+S +SK
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSKSSRSRS 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYD-RDRYRSKERDHRRRSRSRSASPDRHKNHGRG 179
R R+ D++RDK YRRRSRSRS +RY+ ++RD+RRRSRSRSASPD +K GRG
Sbjct: 121 PSRRRHHDDYRDKGYRRRSRSRSYDRYERDRYRGGRDRDYRRRSRSRSASPD-YKRRGRG 179
Query: 180 KYDEE 184
+YD+E
Sbjct: 180 RYDDE 184
>gi|224073347|ref|XP_002304081.1| predicted protein [Populus trichocarpa]
gi|222841513|gb|EEE79060.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/109 (89%), Positives = 106/109 (97%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVES 109
FVRYKYADEAQKAV+RLDGRVVDGREITVQFAKYGP AE+I +GRIVE+
Sbjct: 61 FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPKAERIHKGRIVET 109
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/112 (85%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/112 (85%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|357490719|ref|XP_003615647.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355516982|gb|AES98605.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 140
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/109 (88%), Positives = 105/109 (96%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRQGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVES 109
FVRYKYADEA KAVDRLDGR+VDGREITVQFAKYGPNAE+I +GRI+E+
Sbjct: 61 FVRYKYADEASKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRIIET 109
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/114 (85%), Positives = 106/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/112 (85%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/112 (85%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE IQ+GR+ E + K
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIQKGRVKEGAEK 112
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/112 (84%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLF++YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYA+EAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GRI+E K
Sbjct: 61 FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEK 112
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/112 (83%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDL+PLF++YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRAGPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKAVDRLDGR VDGR I VQFAKYGPNAE I++GR++E K
Sbjct: 61 FVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRVIEEVEK 112
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/112 (85%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKAV+RLDG +VDGREITVQFAKYGPNAE+I +G+I E+ K
Sbjct: 61 FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPK 112
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/112 (84%), Positives = 105/112 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLF++YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYA+EAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GRI+E K
Sbjct: 61 FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEK 112
>gi|357121974|ref|XP_003562691.1| PREDICTED: uncharacterized protein LOC100826320 [Brachypodium
distachyon]
Length = 238
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/174 (72%), Positives = 144/174 (82%), Gaps = 3/174 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG+VVD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEVVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKY DEAQKAVDRLDGR+VDGRE+ VQFAKYGPNAE+IQ+GRI+E+ + +GRSRSR
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRLVDGREMMVQFAKYGPNAERIQKGRIMETLPRPRGRSRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHK 174
SPR YRD+HR +D RR R ERD+ RRSRSRS+SPD +K
Sbjct: 121 SPRRGYRDDHRGRDSYRRRSRSRDRYERE---RYSERDYHRRSRSRSSSPDDYK 171
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 111/126 (88%), Gaps = 1/126 (0%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKA++RLDGR VDGR I VQFAKYG E IQ+GRI ++ K RS SR
Sbjct: 61 FVRYKYADEAQKAIERLDGREVDGRHIVVQFAKYGRKDEPIQRGRITDTGMKRVSRSASR 120
Query: 121 SP-RPR 125
SP RPR
Sbjct: 121 SPKRPR 126
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/114 (84%), Positives = 105/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYG NAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGXNAEPIRKGRVKEGVEKSQ 114
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/108 (87%), Positives = 103/108 (95%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
FVRYKY DEAQKAVDRLDGR+VDGREI VQFAKYGPNAE+I +GRIVE
Sbjct: 61 FVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRIVE 108
>gi|448878216|gb|AGE46071.1| arginine/serine-rich splicing factor SC30 transcript X [Zea mays]
Length = 136
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/114 (84%), Positives = 105/114 (92%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDLFPLFE+YGKVVDVF PRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFERYGKVVDVFTPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRDVDGRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 114
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/107 (85%), Positives = 100/107 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+ GPPDIRDTYSLLVLNITFRT+ADDLFPLF++YGKVVD+FIPRD+RTGDSRGFA
Sbjct: 1 MSHFGRFGPPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDKRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIV 107
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE Q+GR+
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEATQRGRVT 107
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/127 (76%), Positives = 111/127 (87%), Gaps = 1/127 (0%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRYKYADEAQKA++RLDGR VDGR I VQFAKYG E IQ+GRI ++ K RS SR
Sbjct: 61 FVRYKYADEAQKAIERLDGREVDGRHIVVQFAKYGRKDEPIQRGRITDTGMKRVSRSASR 120
Query: 121 SP-RPRY 126
SP RP +
Sbjct: 121 SPKRPSW 127
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%), Gaps = 3/171 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAEKI +GRI E + K +GR RSR
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPD 171
SPR RYR+++ D+DYRRRS+SRSRERY++ YR + DHRR R+ S SPD
Sbjct: 121 SPRQRYREDYWDRDYRRRSQSRSRERYEQAGYR--DGDHRRH-RTHSISPD 168
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 112
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 140/171 (81%), Gaps = 3/171 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAEKI +GRI E + K +GR RSR
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPD 171
SPR RYR+++ D+DYRRRS+SRSRERY++ YR + DHRR R+ S SPD
Sbjct: 121 SPRQRYREDYWDRDYRRRSQSRSRERYEQAGYR--DGDHRRH-RTHSISPD 168
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 198 bits (504), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 112
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNA I +GR+ E K
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAVPIHKGRVKEGVEK 112
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/116 (81%), Positives = 105/116 (90%), Gaps = 1/116 (0%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 115
AFVRYKY DEAQKAV+RLDGR+VDGREI VQFAKYGPNAE+I +GRIVE + G
Sbjct: 61 AFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGPNAERINKGRIVEPVPRPGG 116
>gi|224082127|ref|XP_002306575.1| predicted protein [Populus trichocarpa]
gi|222856024|gb|EEE93571.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/101 (92%), Positives = 100/101 (99%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNITFRTTADDLFPLF+KYGKVVDVFIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKI 101
FVRYKYA+EAQKAVDRLDGRVVDGREI VQFAKYGPNAE++
Sbjct: 61 FVRYKYAEEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERM 101
>gi|194708586|gb|ACF88377.1| unknown [Zea mays]
gi|414590930|tpg|DAA41501.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590931|tpg|DAA41502.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 238
Score = 196 bits (497), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 103/109 (94%), Gaps = 1/109 (0%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
AFVRYKY DEAQKAVDRLDGR+VDGREI VQFAKYGPNAE+I +GRI+E
Sbjct: 61 AFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRIME 109
>gi|224099521|ref|XP_002334472.1| predicted protein [Populus trichocarpa]
gi|222872360|gb|EEF09491.1| predicted protein [Populus trichocarpa]
Length = 101
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/101 (91%), Positives = 99/101 (98%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDLFPLF+KYGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKI 101
FVRYKYADEAQKAV+RLDGRVVDGREITVQFAKYGP AE++
Sbjct: 61 FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPKAERM 101
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/116 (81%), Positives = 105/116 (90%), Gaps = 1/116 (0%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 115
AFVRYKY DEAQKAV+RLDGR+VDGREI VQFAKYGPNAE+I +GRIVE + G
Sbjct: 61 AFVRYKYEDEAQKAVERLDGRLVDGREIMVQFAKYGPNAERINKGRIVEPVPRPGG 116
>gi|238011430|gb|ACR36750.1| unknown [Zea mays]
gi|414590933|tpg|DAA41504.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 190
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 103/109 (94%), Gaps = 1/109 (0%)
Query: 1 MSHFGKSGPPD-IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGF
Sbjct: 1 MSRFGRSGPPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
AFVRYKY DEAQKAVDRLDGR+VDGREI VQFAKYGPNAE+I +GRI+E
Sbjct: 61 AFVRYKYEDEAQKAVDRLDGRLVDGREIMVQFAKYGPNAERINKGRIME 109
>gi|448878330|gb|AGE46128.1| arginine/serine-rich splicing factor SC31 transcript VI [Sorghum
bicolor]
Length = 107
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/102 (89%), Positives = 97/102 (95%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDIRDT+SLLVLNI+FRTTADDL+PLFE+YGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQ 102
FVRYKYADEAQKA+DRLDGR VDGR I VQFAKYGPNAE I
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIH 102
>gi|448878409|gb|AGE46167.1| arginine/serine-rich splicing factor SC39 transcript I
[Physcomitrella patens subsp. patens]
Length = 340
Score = 192 bits (487), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 87/112 (77%), Positives = 102/112 (91%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRYKY+DEAQKA++RLDGR VDGR I VQ AKYG N E I +GRI +++ K
Sbjct: 61 FVRYKYSDEAQKAIERLDGRAVDGRNIVVQSAKYGRNDEPIHRGRITDTTVK 112
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/110 (79%), Positives = 101/110 (91%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESS 110
FVRYKYADEAQKA++RLDGR VDGR I VQ AKYG N E I +GRI +++
Sbjct: 61 FVRYKYADEAQKAIERLDGRTVDGRNIVVQSAKYGRNDEPIHRGRITDTT 110
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/151 (64%), Positives = 106/151 (70%), Gaps = 37/151 (24%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFR---------------------------------- 26
MSHFG+SGPPDIRDT+SLLVLNI+FR
Sbjct: 1 MSHFGRSGPPDIRDTFSLLVLNISFREGDLTLAPPAPPTLPTLSLPLSLIASFSYPSPPR 60
Query: 27 ---TTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVD 83
TTADDLFPLFE+YGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA+DRLDGR VD
Sbjct: 61 FTGTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDRLDGRDVD 120
Query: 84 GREITVQFAKYGPNAEKIQQGRIVESSSKSK 114
GR I VQFAKYGPNAE I++GR+ E KS+
Sbjct: 121 GRNIMVQFAKYGPNAEPIRKGRVKEGVEKSQ 151
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/178 (68%), Positives = 148/178 (83%), Gaps = 3/178 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ RDT+SLLVLN++FRTTADDLFPLF++YG+VVD+ IPRDRRTG+SRGFA
Sbjct: 1 MSRFGRSGHPENRDTFSLLVLNVSFRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRY Y DEAQ A+D LDG GR + VQFAKYGPNAEKI +GRI E + K +GR RSR
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFGGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRFRSR 120
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGR 178
SPRPRYR++++D+DYRRRS+SRSRERY++DRYR + DHRR R+RS SPD + H R
Sbjct: 121 SPRPRYREDYQDRDYRRRSQSRSRERYEQDRYR--DGDHRRH-RTRSISPDYDRKHNR 175
>gi|448878218|gb|AGE46072.1| arginine/serine-rich splicing factor SC26 transcript I [Zea mays]
Length = 218
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 141/171 (82%), Gaps = 3/171 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++S+LVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRY Y DEA+ A+D LDG DGR + VQFAKYGPNAEKI +GRI E + K +GR RSR
Sbjct: 63 FVRYNYEDEARDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSR 122
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPD 171
SPR RYR+++RD+DYRRRS+SRSRERY++ YR + DHRR R+ S SPD
Sbjct: 123 SPRQRYREDYRDRDYRRRSQSRSRERYEQAGYR--DGDHRRH-RTHSISPD 170
>gi|226501776|ref|NP_001148421.1| LOC100282036 [Zea mays]
gi|195619182|gb|ACG31421.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 218
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 141/171 (82%), Gaps = 3/171 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++S+LVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSILVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRY Y DEA+ A+D LDG DGR + VQFAKYGPNAEKI +GRI E + K +GR RSR
Sbjct: 63 FVRYNYEDEARDAIDGLDGXRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSR 122
Query: 121 SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPD 171
SPR RYR+++RD+DYRRRS+SRSRERY++ YR + DHRR R+ S SPD
Sbjct: 123 SPRQRYREDYRDRDYRRRSQSRSRERYEQAGYR--DGDHRRH-RTHSISPD 170
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/123 (69%), Positives = 103/123 (83%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 3 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 62
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAEKI +GRI E + K +GR RSR
Sbjct: 63 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPKPRGRCRSR 122
Query: 121 SPR 123
SPR
Sbjct: 123 SPR 125
>gi|414869213|tpg|DAA47770.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 283
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 101/139 (72%), Gaps = 27/139 (19%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLD---------------------------GRVVDGREITVQFAK 93
FVRYKYADEAQKA+DRLD GR VDGR I VQFAK
Sbjct: 61 FVRYKYADEAQKAIDRLDGGFFFDCAPHVGILELLFLIIVDFLGAGRNVDGRNIMVQFAK 120
Query: 94 YGPNAEKIQQGRIVESSSK 112
YGPNA I +GR+ E K
Sbjct: 121 YGPNAVPIHKGRVKEGVEK 139
>gi|224035925|gb|ACN37038.1| unknown [Zea mays]
gi|448878196|gb|AGE46061.1| arginine/serine-rich splicing factor SC32 transcript III [Zea mays]
Length = 284
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/140 (66%), Positives = 101/140 (72%), Gaps = 28/140 (20%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLD----------------------------GRVVDGREITVQFA 92
FVRYKYADEAQKA+DRLD GR VDGR I VQFA
Sbjct: 61 FVRYKYADEAQKAIDRLDGGFFFFDCAPHVGILELLFLIIVDFLGAGRNVDGRNIMVQFA 120
Query: 93 KYGPNAEKIQQGRIVESSSK 112
KYGPNA I +GR+ E K
Sbjct: 121 KYGPNAVPIHKGRVKEGVEK 140
>gi|302820371|ref|XP_002991853.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
gi|302822709|ref|XP_002993011.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300139211|gb|EFJ05957.1| hypothetical protein SELMODRAFT_136271 [Selaginella moellendorffii]
gi|300140391|gb|EFJ07115.1| hypothetical protein SELMODRAFT_134332 [Selaginella moellendorffii]
Length = 101
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 95/101 (94%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRTTADDL+PLF++YGKVVD+FIPRDRR+G+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTTADDLYPLFDRYGKVVDIFIPRDRRSGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKI 101
FVRYK+ DEAQKA+DRLDG +DGR+I VQFAKYG N EK+
Sbjct: 61 FVRYKHVDEAQKAIDRLDGMTIDGRQIAVQFAKYGRNDEKM 101
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea
mays]
Length = 248
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 89/94 (94%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDT+SLLVLNI+FRTTADDLFPLFE+ GKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRTGPPDIRDTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKY 94
FVRYKYADEAQKA+DRLDGR VDGR I VQFA +
Sbjct: 61 FVRYKYADEAQKAIDRLDGRNVDGRNIMVQFANH 94
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 94/112 (83%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SG P+ R+++SLLVLN++FRTTADDLFPLF++YGKV+D++IPRD RTGD RGFA
Sbjct: 1 MSRFGRSGQPENRESFSLLVLNVSFRTTADDLFPLFDRYGKVLDIYIPRDHRTGDPRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
FVRY Y DEAQ A+D LDG DGR + VQFAKYGPNAEKI +GRI E + K
Sbjct: 61 FVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAKYGPNAEKIHRGRITEENPK 112
>gi|448878413|gb|AGE46169.1| arginine/serine-rich splicing factor SC39 transcript III
[Physcomitrella patens subsp. patens]
Length = 104
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 87/90 (96%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQ 90
FVRYKY+DEAQKA++RLDGR VDGR I VQ
Sbjct: 61 FVRYKYSDEAQKAIERLDGRAVDGRNIVVQ 90
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 86/91 (94%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPDIRDTYSLLVLNITFRT+ADDLFPLF++YGKVVD+FIPRDRRTGDSRGFAFVRYK+AD
Sbjct: 1 PPDIRDTYSLLVLNITFRTSADDLFPLFDRYGKVVDIFIPRDRRTGDSRGFAFVRYKHAD 60
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAE 99
EAQKA++RLDG+ VDGR I VQFAKYG N E
Sbjct: 61 EAQKAIERLDGKNVDGRNIVVQFAKYGRNDE 91
>gi|448878411|gb|AGE46168.1| arginine/serine-rich splicing factor SC39 transcript II
[Physcomitrella patens subsp. patens]
Length = 167
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/92 (81%), Positives = 86/92 (93%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG++GPPDIRDTYSLLVLNITFRT+ADDL+PLF++YGKVVD+FIPRDRRTG+SRGFA
Sbjct: 1 MSHFGRAGPPDIRDTYSLLVLNITFRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFA 92
FVRYKY+DEAQKA++RLDGR VDGR I F
Sbjct: 61 FVRYKYSDEAQKAIERLDGRAVDGRNIVDLFG 92
>gi|297789035|ref|XP_002862530.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
gi|297308107|gb|EFH38788.1| hypothetical protein ARALYDRAFT_920582 [Arabidopsis lyrata subsp.
lyrata]
Length = 116
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/81 (88%), Positives = 77/81 (95%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFG+SGPPDI DTYSLLVLNITFRTTADDL+PLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRV 81
FVRYKY DEA KAV+RLDG++
Sbjct: 61 FVRYKYKDEAHKAVERLDGKI 81
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 77/89 (86%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
++GPPDI TYSLLVLNI+FRTT +DL PLF+KYG+VVD +IPR+RR G SRGFAFVR++
Sbjct: 17 RTGPPDISGTYSLLVLNISFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFR 76
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
++A+KA++ +DGR VDGR ITVQFAKY
Sbjct: 77 KEEDARKAMEEMDGREVDGRSITVQFAKY 105
>gi|448878316|gb|AGE46121.1| arginine/serine-rich splicing factor SC30 transcript II [Sorghum
bicolor]
Length = 188
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 59/61 (96%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS FG+SGPP IRDTYSLLVLNITFRTTADDLFPLF+KYG++VD++IPRDRRTGDSRGFA
Sbjct: 1 MSRFGRSGPPPIRDTYSLLVLNITFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFA 60
Query: 61 F 61
F
Sbjct: 61 F 61
>gi|147792441|emb|CAN70275.1| hypothetical protein VITISV_028726 [Vitis vinifera]
Length = 246
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/58 (89%), Positives = 57/58 (98%)
Query: 52 RTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVES 109
RTG+SRGFAFVRYKYADEAQKAVDRLDGR+VDGREITVQFAKYGPNAE+I +GRIVE+
Sbjct: 7 RTGESRGFAFVRYKYADEAQKAVDRLDGRIVDGREITVQFAKYGPNAERIHKGRIVET 64
>gi|221117570|ref|XP_002161458.1| PREDICTED: uncharacterized protein LOC100200042 isoform 2 [Hydra
magnipapillata]
Length = 195
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 66/91 (72%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G GPP I SL V N+T+RT+ +DL F+KYG++ D++IPRDR T +SRGFAFVRY
Sbjct: 7 GSRGPPQIEGMVSLKVDNLTYRTSMEDLERYFKKYGELGDIYIPRDRNTHESRGFAFVRY 66
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG+V+DGREI V A+YG
Sbjct: 67 YEERDAEDAMDSMDGKVIDGREIRVAMARYG 97
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMVSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG-PNAEKIQQGRIVESSSKSKGRSRSRSP 122
+A+ A+D +DG ++DGRE+ VQ A+YG P GR S RSRS SP
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGGGRRGPPKKHSGRRSRSHSP 121
>gi|172046472|emb|CAQ34908.1| SR family splicing factor SC35 [Chironomus tentans]
Length = 167
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 65/88 (73%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVR+
Sbjct: 7 GPPKIEGMISLKVDNLTYRTTPEDLRRVFERCGSVGDIYIPRDRHTRESRGFAFVRFYEK 66
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A++A+ +DGRV+DGRE+ VQ A+YG
Sbjct: 67 RDAEEALQEMDGRVLDGRELRVQMARYG 94
>gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus]
Length = 254
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 73 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 132
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 133 DAEDAMDAMDGAVLDGRELRVQMARYG 159
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS +G+ PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 1 MSSYGRP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +AQ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 60 FVRFYDKRDAQDALDAMDGRMLDGRELRVQMARYG 94
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N++FR T D++ P+FEKYG+V D++IPRD T +SRGFAFVR+ +A+ A++R
Sbjct: 3 SLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAMER 62
Query: 77 LDGRVVDGREITVQFAKYG-PNAEK 100
LDG V+DGRE+ VQ A+YG PN K
Sbjct: 63 LDGYVIDGREMRVQLARYGRPNENK 87
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS +G+ PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 1 MSSYGRP-PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +AQ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 60 FVRFYDKRDAQDALDAMDGRMLDGRELRVQMARYG 94
>gi|358009411|pdb|2LEA|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm
gi|358009412|pdb|2LEB|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uccagu-3'
gi|358009414|pdb|2LEC|A Chain A, Solution Structure Of Human Srsf2 (Sc35) Rrm In Complex
With 5'- Uggagu-3'
Length = 135
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 41 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 100
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 101 DAEDAMDAMDGAVLDGRELRVQMARYG 127
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 64/88 (72%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RT+ +DL FEKYG+V DV+IPRD T +++GFAFVRY
Sbjct: 4 GPPQIEGMVSLKVDNLTYRTSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEK 63
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ AKYG
Sbjct: 64 RDAEDAIDSMDGAVLDGRELRVQTAKYG 91
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 219
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Mus musculus]
Length = 241
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 241
Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|355718912|gb|AES06428.1| splicing factor, arginine/serine-rich 2 [Mustela putorius furo]
Length = 108
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGF+FVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP+I +SL V N+T+RTT +DL FEKYG V DV+IPRDR T +SRGFAFVRY
Sbjct: 6 GPPEIEGMHSLKVDNLTYRTTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDK 65
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG +DGRE+ VQ A+YG
Sbjct: 66 RDAEDALDAMDGATLDGRELRVQMARYG 93
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 221
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGF+FVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGF+FVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla
gorilla gorilla]
Length = 206
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Monodelphis domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Papio anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2
[Papio anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3
[Papio anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4
[Papio anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component,
35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing
factor, arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b
[Mus musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|149478364|ref|XP_001514814.1| PREDICTED: serine/arginine-rich splicing factor 2-like, partial
[Ornithorhynchus anatinus]
Length = 120
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus]
Length = 121
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP I SL V N+T+RTT +DL +FEKYG V DV+IPR T +SRGFAFVR+
Sbjct: 6 APPQIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 66 RDCEDAMDSLDGYILDGRELRVQMARYG 93
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAILDGRELRVQMARYG 93
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 69/97 (71%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP+I SL V N+T+RTT +DL F+KYG V DV+IPRDR T +SRGFAFVR+
Sbjct: 6 GPPEIDGMTSLKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQG 104
+A+ A+D +DG ++DGRE+ VQ A+YG E ++G
Sbjct: 66 RDAEDALDSMDGAIMDGRELRVQMARYGRPTEPYRRG 102
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVDGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAILDGRELRVQMARYG 93
>gi|393910359|gb|EJD75841.1| hypothetical protein LOAG_17093 [Loa loa]
Length = 203
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
+ GPP I YSL + NI+++T DL LFEKYG++ D+ IPRDR T S+GF FVR+
Sbjct: 4 RPGPPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFY 63
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR+DGR VDGREI V A+Y
Sbjct: 64 SRRDAEYAMDRMDGRWVDGREIRVAMARY 92
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS + + PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 8 MSGYARP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 66
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 FVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYG 101
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS + + PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFA
Sbjct: 1 MSGYARP-PPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 60 FVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYG 94
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|324510397|gb|ADY44347.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
gi|324520781|gb|ADY47708.1| Splicing factor, arginine/serine-rich 4 [Ascaris suum]
Length = 122
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
+ GPP I YSL + NI+++TT DL LFEKYG++ D+ IPRDR T S+GF FVRY
Sbjct: 4 RPGPPSIDGLYSLKIDNISYQTTPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRYY 63
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR+DGR +DGREI V A+Y
Sbjct: 64 SRRDAEYAMDRMDGRWIDGREIRVALARY 92
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+D RE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDARELRVQMARYG 93
>gi|156349201|ref|XP_001621959.1| hypothetical protein NEMVEDRAFT_v1g143061 [Nematostella
vectensis]
gi|156381130|ref|XP_001632119.1| predicted protein [Nematostella vectensis]
gi|156208328|gb|EDO29859.1| predicted protein [Nematostella vectensis]
gi|156219170|gb|EDO40056.1| predicted protein [Nematostella vectensis]
Length = 127
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 68/95 (71%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MS + GPP+I SL V N+T+RTT +DL +F+KYG + D++IPRDR T +SRGFA
Sbjct: 1 MSFDSQRGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFA 60
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A+ A+D +D ++DGRE+ VQ A+YG
Sbjct: 61 FVRFYEKRDAEDAMDCMDRHLLDGREVRVQMARYG 95
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Oreochromis niloticus]
Length = 218
Score = 95.9 bits (237), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVDGMTSLKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu
rubripes]
Length = 229
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|209155586|gb|ACI34025.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|209732124|gb|ACI66931.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 211
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDNR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 82/128 (64%), Gaps = 12/128 (9%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+TFRTT DDL +FE+ G+V D++IPRDR + +SRGFAFVR+
Sbjct: 54 PPRIDGMVSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKR 113
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG-PNAEKIQQGRIVESSSKSKGRSRSRSPRPRYR 127
+A+ A+D +DGR++DGRE+ VQ A+YG P+ S +S+GR R + R
Sbjct: 114 DAEDALDAMDGRILDGRELRVQMARYGRPS-----------SPYRSRGRRRGDHDQGVVR 162
Query: 128 DEHRDKDY 135
D+ R+ D+
Sbjct: 163 DQDREDDH 170
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
SL V NI++RT DL +F K+G V DV+IPRD+ + SRGFAFV Y
Sbjct: 3 SLKVGNISYRTRTLDLHHIFGKFGDVGDVYIPRDKHSKHSRGFAFVSY 50
>gi|241020201|ref|XP_002405861.1| IFN-response element binding factor, putative [Ixodes scapularis]
gi|215491811|gb|EEC01452.1| IFN-response element binding factor, putative [Ixodes scapularis]
Length = 194
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 62/88 (70%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RTT +DL +FEKYG V DV+IPR T DSRGFAFVR+
Sbjct: 6 GPPTIDGMTSLKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRDSRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 66 RDGEDAMDALDGYILDGRELRVQMARYG 93
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT DDL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|332208823|ref|XP_003253510.1| PREDICTED: serine/arginine-rich splicing factor 8 [Nomascus
leucogenys]
Length = 303
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 60/87 (68%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + RT RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEHRTKAPRGFAFVRFHDWS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDGRELRVQVARYG 93
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+ G
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARCG 93
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIEGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRMLDGRELRVQMARYG 93
>gi|426370158|ref|XP_004052038.1| PREDICTED: serine/arginine-rich splicing factor 8 [Gorilla
gorilla gorilla]
Length = 282
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 60/87 (68%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L P+FEKYG+V DV+IPR+ T GFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRPVFEKYGRVGDVYIPREPHTKAPWGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDGRELRVQMARYG 93
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKY +V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|298707093|emb|CBJ29885.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a
[Ectocarpus siliculosus]
Length = 289
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 62/87 (71%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
+GPP+I +L V N+ + ++ DDL +FEKYG++ DV++PRD RTG+ RGFAFVR+
Sbjct: 18 NGPPNIEGMVTLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMD 77
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAK 93
+A A+DR+DG GRE+ +Q+AK
Sbjct: 78 QRDADDAIDRMDGEFFAGRELRIQYAK 104
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP I SL V N+T+RTT +DL +FE+YG V DV+IPR T +SRGFAFVR+
Sbjct: 6 APPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 66 RDCEDAMDALDGYMMDGRELRVQMARYG 93
>gi|357608819|gb|EHJ66166.1| putative serine/arginine rich splicing factor [Danaus plexippus]
Length = 165
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT DDL +FE+ G V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFERR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 67 DAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 70/99 (70%), Gaps = 4/99 (4%)
Query: 1 MSHFGKSG----PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDS 56
MS+ G G PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +S
Sbjct: 1 MSNGGGLGGARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRES 60
Query: 57 RGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
RGFAFVR+ +A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 61 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYG 99
>gi|322789593|gb|EFZ14819.1| hypothetical protein SINV_10987 [Solenopsis invicta]
gi|332021256|gb|EGI61641.1| Splicing factor, arginine/serine-rich 2 [Acromyrmex echinatior]
Length = 175
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|307197633|gb|EFN78812.1| Splicing factor, arginine/serine-rich 2 [Harpegnathos saltator]
Length = 175
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 63/87 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L + EKYG+V D +IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGAVLDGRELRVQMARYG 93
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 18 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 77
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 78 DAEDALEAMDGRMLDGRELRVQMARYG 104
>gi|348019723|gb|AEP43803.1| SR-protein [Biston betularia]
Length = 152
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 66/87 (75%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 67 DAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|443696471|gb|ELT97165.1| hypothetical protein CAPTEDRAFT_18729 [Capitella teleta]
Length = 160
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
MSH PP+I SL V N+T+RTT +DL FEKYG V DV+IPRDR + +SRGFA
Sbjct: 1 MSH--SRTPPNIEGMASLKVDNLTYRTTTEDLRRAFEKYGDVGDVYIPRDRFSHESRGFA 58
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVR+ +A A++ +DG V+DGRE+ VQ AKYG
Sbjct: 59 FVRFFDKRDADDAMESMDGAVMDGRELRVQSAKYG 93
>gi|110762781|ref|XP_393352.2| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
mellifera]
gi|340724784|ref|XP_003400761.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
terrestris]
gi|350398198|ref|XP_003485116.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Bombus
impatiens]
gi|380022396|ref|XP_003695032.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Apis
florea]
gi|383865619|ref|XP_003708270.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Megachile
rotundata]
Length = 176
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|358331785|dbj|GAA50546.1| serine/arginine-rich splicing factor 2 [Clonorchis sinensis]
Length = 340
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M + KS PP I SL V N+ +RTT +DL +F +YG+V DV+IPRD T +SRGFA
Sbjct: 1 MERYAKS-PPRIEGMVSLKVDNLAYRTTIEDLRRVFSRYGEVGDVYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG-PNAEKI 101
FVRY EA A+ +DGR +DGREI VQ AKYG PN+ ++
Sbjct: 60 FVRYPTDREADSAIREMDGRRIDGREIRVQRAKYGRPNSRRM 101
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ + L +FEKYG+V DV+IPRDR + +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG ++DGRE+ VQ A+YG
Sbjct: 67 DAEDAMDAMDGALLDGRELRVQMARYG 93
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I YSL + NI+++T DL LFEKYG++ D+ IPRDR T S+GF FVR+
Sbjct: 282 GPPSIDGLYSLKIDNISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSR 341
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+DR+DGR VDGREI V A+Y
Sbjct: 342 RDAEYAMDRMDGRWVDGREIRVAMARY 368
>gi|114050755|ref|NP_001040152.1| Sr protein [Bombyx mori]
gi|87248221|gb|ABD36163.1| Sr protein [Bombyx mori]
Length = 154
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 66/87 (75%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A++A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEEALDTMDGRMLDGRELRVQMARYG 93
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEK---YGKVVDVFIPRDRRTGDSRGFAFVRYK 65
PPD+ SL V N+T+RT+ D L +FEK YG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFVRFH 66
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 67 DKRDAEDAMDAMDGAVLDGRELRVQMARYG 96
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP I SL V N+T+RTT +DL +FE+YG V DV+IPR T +SRGFAFVR+
Sbjct: 6 APPTIDGMTSLKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDK 65
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + A+D LDG ++DGRE+ VQ A+YG
Sbjct: 66 RDCEDAMDALDGYMMDGRELRVQMARYG 93
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 17 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 76
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 77 DAEDALEAMDGRMLDGRELRVQMARYG 103
>gi|226476662|emb|CAX72223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQIAKYG 94
>gi|345486316|ref|XP_003425445.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Nasonia
vitripennis]
Length = 198
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR+VDGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRMVDGRELRVQMARYG 93
>gi|261335957|emb|CBH09290.1| putative Sr protein [Heliconius melpomene]
Length = 165
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 67 DAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 16 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 76 DAEDALEAMDGRMLDGRELRVQMARYG 102
>gi|114613263|ref|XP_519086.2| PREDICTED: uncharacterized protein LOC463398 isoform 2 [Pan
troglodytes]
Length = 293
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+ +
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRSD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 68 AQDAEAAMDGAVLDGRELRVQMARYG 93
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
FG +GPPDI SL V N+T+RTT +DL +F K+G V DV+IPR+ R +SRGFAFVR
Sbjct: 63 FG-NGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVR 121
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKY 94
+ +A++A+D LDG +DGRE+ + AKY
Sbjct: 122 FFDRRDAEEAMDALDGYRLDGRELRIAMAKY 152
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
FG GPPDI SL V N+T+RTT +DL +F K+G V DV+IPR+ R +SRGFAFVR
Sbjct: 3 FGGRGPPDIHGMVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVR 62
Query: 64 Y 64
+
Sbjct: 63 F 63
>gi|321458047|gb|EFX69122.1| hypothetical protein DAPPUDRAFT_62581 [Daphnia pulex]
Length = 109
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP I SL V N+T+RTT +DL +FEKYG V DV+IP+DR + +SRGFAFVR+
Sbjct: 5 GPPRIEGMTSLKVDNLTYRTTCEDLRRVFEKYGDVGDVYIPKDRFSRESRGFAFVRFYDR 64
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+ + A+ +DGR++DGRE+ VQ A+YG
Sbjct: 65 RDGEDAMHAMDGRMMDGRELRVQLARYG 92
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 1 MSH-FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
MSH G PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGF
Sbjct: 1 MSHNSGGRPPPRIDGMISLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 60
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
AFVR+ +A+ A++ +DGR +DGRE+ VQ A+YG
Sbjct: 61 AFVRFYDKRDAEDALEAMDGRKLDGRELRVQMARYG 96
>gi|443429415|gb|AGC92700.1| serine/arginine-rich splicing factor 2-like protein [Heliconius
erato]
Length = 168
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFYDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A++A+D LDGR++DGRE+ VQ A+YG
Sbjct: 67 DAEEALDSLDGRMLDGRELRVQMARYG 93
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 17 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 76
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A++ +DGR++DGRE+ VQ A+YG
Sbjct: 77 DAEDALEAMDGRMLDGRELRVQMARYG 103
>gi|303324701|pdb|2KN4|A Chain A, The Structure Of The Rrm Domain Of Sc35
Length = 158
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/85 (55%), Positives = 63/85 (74%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+ +A
Sbjct: 66 DVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDA 125
Query: 71 QKAVDRLDGRVVDGREITVQFAKYG 95
+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 126 EDAMDAMDGAVLDGRELRVQMARYG 150
>gi|226481921|emb|CAX79226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPCTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|256092430|ref|XP_002581940.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230938|emb|CCD77355.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 151
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+ +
Sbjct: 7 PPDVDGMITLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHHRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +D ++DGRE+ VQ A YG
Sbjct: 67 DAQDAEAAMDRAMLDGRELRVQMALYG 93
>gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum]
gi|226476664|emb|CAX72224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476666|emb|CAX72225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476668|emb|CAX72226.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476670|emb|CAX72227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476672|emb|CAX72228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226476674|emb|CAX72229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481907|emb|CAX79219.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481909|emb|CAX79220.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481911|emb|CAX79221.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481913|emb|CAX79222.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481915|emb|CAX79223.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481917|emb|CAX79224.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481919|emb|CAX79225.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481923|emb|CAX79227.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481925|emb|CAX79228.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481927|emb|CAX79229.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481929|emb|CAX79230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481933|emb|CAX79232.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481935|emb|CAX79233.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481937|emb|CAX79234.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481939|emb|CAX79235.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481941|emb|CAX79236.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481943|emb|CAX79237.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481945|emb|CAX79238.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481947|emb|CAX79239.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481949|emb|CAX79240.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481951|emb|CAX79241.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481953|emb|CAX79242.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481955|emb|CAX79243.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481957|emb|CAX79244.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481959|emb|CAX79245.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|226481961|emb|CAX79246.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ D L +FEKYG++ DV+IPRDR T SRGFAFVR+ + A+ A+D
Sbjct: 5 SLKVDNLTYRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDALDA 64
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGR-------SRSRSPR 123
+DG V+DGR++ VQ A Y + GR + +G+ RSRSPR
Sbjct: 65 VDGVVLDGRKLRVQMA-YHDGPPDLHYGRRCGKTPPPEGKWEKDDDYGRSRSPR 117
>gi|226476676|emb|CAX72230.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 151
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYYTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 61/79 (77%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+ +A+ A+D
Sbjct: 3 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 62
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG V+DGRE+ VQ A+YG
Sbjct: 63 MDGAVLDGRELRVQMARYG 81
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|226481931|emb|CAX79231.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
Length = 163
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 62/86 (72%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL V N+T+ TT +DL FEKYG+V D++IPRD+ + +SRGFAFVRY +
Sbjct: 8 PDIEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
A+ A+D +DG + DGR++ VQ A+YG
Sbjct: 68 AEDAMDSMDGNLYDGRKLRVQMARYG 93
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 58/86 (67%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T R FAFVR+ +
Sbjct: 8 PDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFVRFHDRSD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
AQ A +DG V+DGRE+ VQ A+YG
Sbjct: 68 AQDAEAAMDGAVLDGRELRVQMARYG 93
>gi|256092432|ref|XP_002581941.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|353230939|emb|CCD77356.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 102
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|256092428|ref|XP_002581939.1| serine/arginine rich splicing factor [Schistosoma mansoni]
gi|226481905|emb|CAX79218.1| Splicing factor, arginine/serine-rich 2 [Schistosoma japonicum]
gi|353230937|emb|CCD77354.1| putative serine/arginine rich splicing factor [Schistosoma
mansoni]
Length = 102
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MSHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
M+ +G+S PP I SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFA
Sbjct: 1 MNRYGRS-PPRIDGMVSLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFA 59
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
FVRY EA A+ +DG VDGRE+ VQ AKYG
Sbjct: 60 FVRYCTDREADCAIRGMDGHKVDGREVRVQRAKYG 94
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|307169015|gb|EFN61874.1| Splicing factor, arginine/serine-rich 2 [Camponotus floridanus]
Length = 208
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DGR++DGRE+ VQ A+YG
Sbjct: 67 DAEDALDAMDGRLLDGRELRVQMARYG 93
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 62/79 (78%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RTTA+DL +FE+ G V D++IPRDR T +SRGFAFVR+ +A+ A+D
Sbjct: 3 SLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDALDS 62
Query: 77 LDGRVVDGREITVQFAKYG 95
LDGR++DGRE+ VQ A+YG
Sbjct: 63 LDGRMLDGRELRVQMARYG 81
>gi|426356205|ref|XP_004045477.1| PREDICTED: uncharacterized protein LOC101137976 [Gorilla gorilla
gorilla]
Length = 496
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKY V DV+IPR+ T RGFAFVR+
Sbjct: 201 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYWPVGDVYIPREPHTKAPRGFAFVRFHDRS 260
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG-PNAEKIQQGRIVESSSKSKGRSRSRSPRPRYR 127
+AQ A +DG V+DGRE+ V+ A+YG + + Q SS + RSRSPR R+R
Sbjct: 261 DAQDAEAAMDGAVLDGRELRVRMARYGRRDLPRSSQEEPRGSSWGGRYGLRSRSPRGRHR 320
Query: 128 DE 129
+
Sbjct: 321 SQ 322
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+T+RTT +DL +FE+YG V DV+IPR T +SRGFAFVR+ + + A+D L
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 78 DGRVVDGREITVQFAKYG 95
DG ++DGRE+ VQ A+YG
Sbjct: 61 DGYMMDGRELRVQMARYG 78
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 61/78 (78%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+V N+T+RTT +DL +FE+ G+V D++IPRDR T +SRGFAFVR+ +A+ A++ +
Sbjct: 48 CVVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 107
Query: 78 DGRVVDGREITVQFAKYG 95
DGR++DGRE+ VQ A+YG
Sbjct: 108 DGRMLDGRELRVQMARYG 125
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|115843189|ref|XP_001198099.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 61/86 (70%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PD SL V N+T+ TT +DL FEKYG+V D++IPRD+ + +SRGFAFVRY +
Sbjct: 8 PDFEGMTSLKVDNLTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRD 67
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
A+ A+D +DG + DGR++ VQ A+YG
Sbjct: 68 AEDAMDSMDGNLYDGRKLRVQMARYG 93
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like
[Callithrix jacchus]
Length = 295
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 59/87 (67%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQR 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A +DG +DGRE+ VQ A+YG
Sbjct: 67 DAEDAEAAMDGAELDGRELRVQVARYG 93
>gi|196000460|ref|XP_002110098.1| hypothetical protein TRIADDRAFT_17694 [Trichoplax adhaerens]
gi|190588222|gb|EDV28264.1| hypothetical protein TRIADDRAFT_17694, partial [Trichoplax
adhaerens]
Length = 89
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
P+I SL V NIT+RTT DDL +F+KYG++ DV+IPRDRR G+SRG+AFVRY +
Sbjct: 1 PEISSMTSLKVDNITYRTTVDDLKRIFDKYGEIGDVYIPRDRR-GESRGYAFVRYHDRRD 59
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
A+ A+D + G+ DGRE+ V A+YG
Sbjct: 60 AEDAMDCVHGKNFDGRELRVVMARYG 85
>gi|440895154|gb|ELR47416.1| Serine/arginine-rich splicing factor 2, partial [Bos grunniens
mutus]
Length = 86
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 59/79 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREI 87
+A+ A+D +DG V+DGRE+
Sbjct: 67 DAEDAMDAMDGAVLDGREL 85
>gi|395841993|ref|XP_003793806.1| PREDICTED: uncharacterized protein LOC100943026 [Otolemur
garnettii]
Length = 308
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+T+ T++ L +FEKYG + DV+IPRDR T +SRGFAF+R+ Y A+ A+
Sbjct: 14 SIKVNNLTYHTSSYTLRRMFEKYGPIDDVYIPRDRLTNESRGFAFIRFCYKHHAEDALGA 73
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRS 121
LDG ++DG E+ VQ A E + QG + G +RSRS
Sbjct: 74 LDGILLDGHELQVQLAHCACPLE-LCQGPSELGRGRGPGCNRSRS 117
>gi|431908736|gb|ELK12328.1| Splicing factor, arginine/serine-rich 2 [Pteropus alecto]
Length = 178
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 59/79 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGREI 87
+A+ A+D +DG V+DGRE+
Sbjct: 67 DAEDAMDAMDGAVLDGREL 85
>gi|51094549|gb|EAL23803.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 293
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+D RE+ V+ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDERELRVRMARYG 93
>gi|51094548|gb|EAL23802.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo
sapiens]
Length = 549
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + T RGFAFVR+
Sbjct: 263 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 322
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+D RE+ V+ A+YG
Sbjct: 323 DAQDAEAAMDGAVLDERELRVRMARYG 349
>gi|270012859|gb|EFA09307.1| hypothetical protein TcasGA2_TC030627 [Tribolium castaneum]
Length = 161
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP I SL V N+T+RTT +DL +FE+ G V D++IPRDR T +SRGFAFVRY+
Sbjct: 7 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGDVGDIYIPRDRFTRESRGFAFVRYR--- 63
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
+A+ A+D +DGR++DGRE+ VQ A
Sbjct: 64 DAEDALDAMDGRMLDGRELRVQMA 87
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris
gallopavo]
Length = 239
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDGR 85
+A+ A+D +DG V+DGR
Sbjct: 67 DAEDAMDAMDGAVLDGR 83
>gi|198415726|ref|XP_002129926.1| PREDICTED: similar to splicing factor, arginine/serine-rich 2
(SC-35) [Ciona intestinalis]
Length = 178
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP + + SL V N+T+RT+ + L FEKYG V DV+IPRDR + +SRGFAFVR+
Sbjct: 8 PPGLDNMVSLKVDNLTYRTSPETLKRSFEKYGDVGDVYIPRDRYSRESRGFAFVRFYDKR 67
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG+ +DGR + V A+YG
Sbjct: 68 DAEDAMDCMDGKTMDGRVLRVAMARYG 94
>gi|332837543|ref|XP_001139222.2| PREDICTED: uncharacterized protein LOC738374 [Pan troglodytes]
Length = 279
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 58/87 (66%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IP + T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPLEPHTKAPRGFAFVRFHDRS 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG V+D RE+ V+ A+YG
Sbjct: 67 DAQDAEAAMDGAVLDERELRVRMARYG 93
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 61/79 (77%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+T+RT+ + L +FEKYG+V DV+IPRDR + +SRGFAFVR+ +A+ A+D
Sbjct: 1 SLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDA 60
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG ++DGRE+ VQ A+YG
Sbjct: 61 MDGALLDGRELRVQMARYG 79
>gi|17532817|ref|NP_495013.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
gi|3929375|sp|Q09511.1|RSP4_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 4;
AltName: Full=CeSC35; AltName: Full=RNA-binding protein
srp-2
gi|351060987|emb|CCD68734.1| Protein RSP-4, isoform a [Caenorhabditis elegans]
Length = 196
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 13 PDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 72
Query: 70 AQKAVDRLDGRVVDGREITVQFAKY 94
A+ A+DR DG++VDGRE+ V AKY
Sbjct: 73 AEHALDRTDGKLVDGRELRVTLAKY 97
>gi|189502900|gb|ACE06831.1| unknown [Schistosoma japonicum]
Length = 138
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 56/79 (70%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +RTT DDL +F ++G+V D++IPRD T +SRGFAFVRY EA A+
Sbjct: 3 SLKVDNLAYRTTIDDLRRVFSRFGEVGDIYIPRDPYTFESRGFAFVRYCTDREADCAIRG 62
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG VDGRE+ VQ AKYG
Sbjct: 63 MDGHKVDGREVRVQRAKYG 81
>gi|268531152|ref|XP_002630702.1| C. briggsae CBR-RSP-4 protein [Caenorhabditis briggsae]
Length = 195
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 60/85 (70%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL +FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 12 PDINGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 71
Query: 70 AQKAVDRLDGRVVDGREITVQFAKY 94
A+ A+DR DG++VDGRE+ V AKY
Sbjct: 72 AEHALDRTDGKLVDGRELRVTLAKY 96
>gi|159164254|pdb|2DNM|A Chain A, Solution Structure Of Rna Binding Domain In Srp46
Splicing Factor
Length = 103
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G SGP D+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 4 GSSGP-DVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRF 62
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+AQ A +DG +DGRE+ VQ A+YG
Sbjct: 63 HDRRDAQDAEAAMDGAELDGRELRVQVARYG 93
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDG 84
+A+ A+D +DG V+DG
Sbjct: 67 DAEDAMDAMDGAVLDG 82
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRVVDG 84
+A+ A+D +DG V+DG
Sbjct: 67 DAEDAMDAMDGAVLDG 82
>gi|224107319|ref|XP_002314444.1| predicted protein [Populus trichocarpa]
gi|222863484|gb|EEF00615.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL FEK+G + D+++P++ TG+ RGF FV+Y+Y ++A +A R+
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS-----KSKGRSRSRSPRPRYR 127
D +++ GREI + FA+ N + Q+ R +S GR+ RSPR RYR
Sbjct: 110 DHKIIGGREIRIVFAEE--NRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYR 162
>gi|17532819|ref|NP_495014.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
gi|351060988|emb|CCD68735.1| Protein RSP-4, isoform b [Caenorhabditis elegans]
Length = 126
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 13 PDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 72
Query: 70 AQKAVDRLDGRVVDGREITVQFAKY 94
A+ A+DR DG++VDGRE+ V AKY
Sbjct: 73 AEHALDRTDGKLVDGRELRVTLAKY 97
>gi|118484981|gb|ABK94355.1| unknown [Populus trichocarpa]
Length = 252
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL FEK+G + D+++P++ TG+ RGF FV+Y+Y ++A +A R+
Sbjct: 50 LLIRNLPLDARPEDLRGPFEKFGPLKDIYLPKNYHTGEPRGFGFVKYRYGEDAAEAKKRM 109
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS-----KSKGRSRSRSPRPRYR 127
D +++ GREI + FA+ N + Q+ R +S GR+ RSPR RYR
Sbjct: 110 DHKIIGGREIRIVFAEE--NRKTPQEMRRTPRTSDRHGGSHGGRTPPRSPRHRYR 162
>gi|255551589|ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223543928|gb|EEF45454.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 71/115 (61%), Gaps = 7/115 (6%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL FEKYG V DV++P++ TG+ RGF FV+Y+YA++A +A R+
Sbjct: 54 LLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQRM 113
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS-----KSKGRSRSRSPRPRYR 127
+ +++ GREI + +A+ N + Q+ R S ++GR+ +SPR R+R
Sbjct: 114 NHKIIGGREIRIVYAEE--NRKTPQEMRTTARVSGRHGGSTRGRTPPKSPRRRHR 166
>gi|308493715|ref|XP_003109047.1| CRE-RSP-4 protein [Caenorhabditis remanei]
gi|308247604|gb|EFO91556.1| CRE-RSP-4 protein [Caenorhabditis remanei]
Length = 199
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 60/85 (70%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL +F++YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 12 PDINGLTSLKIDNLSYQTTPNDLRRVFDRYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 71
Query: 70 AQKAVDRLDGRVVDGREITVQFAKY 94
A+ A+DR DG++VDGRE+ V AKY
Sbjct: 72 AEHALDRTDGKLVDGRELRVTLAKY 96
>gi|167518892|ref|XP_001743786.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777748|gb|EDQ91364.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 59/91 (64%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G+ P ++ +SL V NIT T D + LF+ +G++ D+++PRDR T SRGF FVR+
Sbjct: 3 GRPPPSNVDAMFSLKVDNITSDMTEDMMRDLFKDFGEIGDIYMPRDRNTNRSRGFCFVRF 62
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
+A KA +++DG +GR++ VQ AK+G
Sbjct: 63 YEEADADKAAEKMDGHAFEGRDLIVQKAKFG 93
>gi|341895771|gb|EGT51706.1| hypothetical protein CAEBREN_26166 [Caenorhabditis brenneri]
gi|341900371|gb|EGT56306.1| hypothetical protein CAEBREN_17888 [Caenorhabditis brenneri]
Length = 200
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI SL + N++++TT +DL +FE+YG + DV IPRD+ + S+GF FVR+ +
Sbjct: 12 PDIGGLTSLKIDNLSYQTTPNDLRRVFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRD 71
Query: 70 AQKAVDRLDGRVVDGREITVQFAKY 94
A+ A+DR DG+ VDGRE+ V AKY
Sbjct: 72 AEHAMDRTDGKNVDGRELRVTLAKY 96
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+ +AQ A
Sbjct: 5 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 64
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG +DGRE+ VQ A+YG
Sbjct: 65 MDGAELDGRELRVQVARYG 83
>gi|326504506|dbj|BAJ91085.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508622|dbj|BAJ95833.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 16/175 (9%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G + DV++PR+ T + RGF FV++++ ++A A +
Sbjct: 58 LLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRHPEDAAYAKQEM 117
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG-----RSRSRSPRPRYRDEHRD 132
+ +V+ GREIT+ FA+ N + Q+ R S G +S SRSPRPRY +
Sbjct: 118 NHQVICGREITIVFAEE--NRKTPQEMRFRTRSRHMDGNYRRRQSMSRSPRPRY-PSYSP 174
Query: 133 KDYRRRSRSRSRERYD-RDRYRSKERDHRRR-SRSRSASPDRHK------NHGRG 179
+ R SR R+ Y R Y RD R+ S RS S D H+ N+G G
Sbjct: 175 EPSPVRQNSRDRDNYSPRGSYSPPTRDKRQHISDCRSPSLDGHERRISPSNNGHG 229
>gi|313228380|emb|CBY23531.1| unnamed protein product [Oikopleura dioica]
gi|313241505|emb|CBY33754.1| unnamed protein product [Oikopleura dioica]
Length = 201
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPDI SL + N+++RT A+ L F K+G++ DV+IP+D+ G+SRGFAFVR+
Sbjct: 6 PPDIGGMTSLKIDNLSYRTDAESLRRTFSKFGEIGDVYIPKDKH-GESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKY 94
+A A+D L G+ +DGREI V +A++
Sbjct: 65 DAGDAIDDLAGKDLDGREIRVDYARH 90
>gi|397516519|ref|XP_003828475.1| PREDICTED: uncharacterized protein LOC100992382 [Pan paniscus]
Length = 384
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 153 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRR 212
Query: 69 EAQKAVDRLDGRVVDGREITVQ 90
+AQ A +DG +DGRE+ V
Sbjct: 213 DAQDAEAAMDGAELDGRELRVH 234
>gi|313242082|emb|CBY34259.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+I SL + N+++RT ++ L F KYG++ DV+IP+D+ G+SRGFAFVR+
Sbjct: 6 PPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDK-YGESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKY 94
+A A+D+LDGR +DGREI V +A++
Sbjct: 65 DAGDAIDQLDGRDIDGREIRVDYARH 90
>gi|313227248|emb|CBY22395.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+I SL + N+++RT ++ L F KYG++ DV+IP+D+ G+SRGFAFVR+
Sbjct: 6 PPNIGGMTSLKIDNLSYRTDSESLRRKFSKYGEIGDVYIPKDK-YGESRGFAFVRFHDKR 64
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKY 94
+A A+D+LDGR +DGREI V +A++
Sbjct: 65 DAGDAIDQLDGRDIDGREIRVDYARH 90
>gi|255084425|ref|XP_002508787.1| predicted protein [Micromonas sp. RCC299]
gi|226524064|gb|ACO70045.1| predicted protein [Micromonas sp. RCC299]
Length = 248
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G GPPDI YSL + N+ + T + L LF K+G++ DV++PRD T SRGFAFVR+
Sbjct: 20 GPKGPPDISGLYSLKLDNLDYSVTLEQLKELFGKHGEIGDVYMPRDYYTKRSRGFAFVRF 79
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK 93
K A+ A+ D + ++GR I +FA+
Sbjct: 80 KDRTAAEDAIKEFDQKELNGRPIACRFAE 108
>gi|448878421|gb|AGE46173.1| arginine/serine-rich splicing factor SCL33 transcript I
[Physcomitrella patens subsp. patens]
Length = 286
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI TADDL FE+YG V DV++PRD TG RGF FV++ +A +A
Sbjct: 57 SLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYC 116
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
LD +++ GREITV FA+ N +K Q+ RI E
Sbjct: 117 LDHQLIAGREITVVFAEE--NRKKPQEMRIKE 146
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
+L V NI F + ++L +FE GK+ DV+IPRD RTG+ RGFAFVRY +A AVD
Sbjct: 2 VTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVD 61
Query: 76 RLDGRVVDGREITVQFAK 93
RLDG +GRE+ +Q+A+
Sbjct: 62 RLDGTRFNGRELRIQYAR 79
>gi|168044871|ref|XP_001774903.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673797|gb|EDQ60315.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 90/184 (48%), Gaps = 28/184 (15%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D + SLLV NI +A+DL FE+YG V DV++PRD TG RGF FV++ +A
Sbjct: 37 DSTEPSSLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDA 96
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSR-SRSPRPRYRDE 129
+A LD +++ GREITV FA+ N +K Q+ R +K R R +RSP P
Sbjct: 97 AEAQYCLDHQLIQGREITVVFAEE--NRKKPQEMR-------TKERIRPARSPSP----- 142
Query: 130 HRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRS 189
RE R S R HRRR+ RS P R ++ + + R+
Sbjct: 143 -------------GRENNAPSRSPSAVRSHRRRTGERSPMPSRERSPALPRRSRDGEPRA 189
Query: 190 RSYE 193
R E
Sbjct: 190 RELE 193
>gi|168056094|ref|XP_001780057.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668555|gb|EDQ55160.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 225
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI TADDL FE+YG V DV++PRD TG RGF FV++ +A +A
Sbjct: 57 SLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYC 116
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
LD +++ GREITV FA+ N +K Q+ RI E
Sbjct: 117 LDHQLIAGREITVVFAEE--NRKKPQEMRIKE 146
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
KS PDI YSL V NI +R + +F +G++ DV++PRDR TG+SRGFAFVR+
Sbjct: 1 KSTAPDISGMYSLKVDNIAYRVDVGRVREMFAAHGEIGDVYMPRDRTTGNSRGFAFVRFI 60
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
+EA+ A+ ++ + ++GR I V FA+
Sbjct: 61 DKNEAEDAIKAMNEKEIEGRAIRVAFAE 88
>gi|448878423|gb|AGE46174.1| arginine/serine-rich splicing factor SCL33 transcript II
[Physcomitrella patens subsp. patens]
Length = 248
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI TADDL FE+YG V DV++PRD TG RGF FV++ +A +A
Sbjct: 57 SLLVRNIPRDCTADDLRIPFERYGVVKDVYLPRDYYTGLPRGFGFVQFLEPRDAAEAQYC 116
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
LD +++ GREITV FA+ N +K Q+ RI E
Sbjct: 117 LDHQLIAGREITVVFAEE--NRKKPQEMRIKE 146
>gi|301096303|ref|XP_002897249.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
gi|262107334|gb|EEY65386.1| mannitol dehydrogenase, putative [Phytophthora infestans T30-4]
Length = 543
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 60/85 (70%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP++ ++L V N+ F+ +D+L LF K+G++ DV+IPR R + +SRGFAFVR+
Sbjct: 350 PPNVDSMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFIEKR 409
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+D ++G+ GR++ VQFAK
Sbjct: 410 DAEDAIDGMEGQEFQGRDLRVQFAK 434
>gi|26452521|dbj|BAC43345.1| putative Serine/arginine rich protein [Arabidopsis thaliana]
Length = 236
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL FE++G + D+++PR+ TG+ RGF FV+Y+YA++A +A+ R+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 115
+ +V+ GREI + FA+ N + Q+ R +S +G
Sbjct: 109 NHKVIGGREIAIVFAE--ENRKTTQEMRTTNGTSGRRG 144
>gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens]
gi|119609852|gb|EAW89446.1| splicing factor, arginine/serine-rich 2, isoform CRA_f [Homo
sapiens]
Length = 186
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRV 81
+A+ A+D +DG V
Sbjct: 67 DAEDAMDAMDGAV 79
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R SLL+ NI+ R +D+L FE++G V DV+IPRD T + +GFAFV +K +A++
Sbjct: 4 RSGISLLIRNISRRMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERDAEE 63
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+ LDG +DGREITV FA+
Sbjct: 64 ALRNLDGSRLDGREITVVFAQ 84
>gi|448878427|gb|AGE46176.1| arginine/serine-rich splicing factor SCL42 transcript I
[Physcomitrella patens subsp. patens]
Length = 370
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D + SLLV NI +A+DL FE+YG V DV++PRD TG RGF FV++ +A
Sbjct: 37 DSTEPSSLLVRNIPRDCSAEDLRIPFERYGVVKDVYLPRDYYTGQPRGFGFVQFLEPRDA 96
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
+A LD +++ GREITV FA+ N +K Q+ R E
Sbjct: 97 AEAQYCLDHQLIQGREITVVFAEE--NRKKPQEMRTKE 132
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDG 79
+A+ A+D +DG
Sbjct: 67 DAEDAMDAMDG 77
>gi|30687014|ref|NP_197382.3| SC35-like splicing factor 28 [Arabidopsis thaliana]
gi|91806878|gb|ABE66166.1| 28 kDa SC35-like splicing factor [Arabidopsis thaliana]
gi|332005232|gb|AED92615.1| SC35-like splicing factor 28 [Arabidopsis thaliana]
Length = 236
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LL+ N+ +DL FE++G + D+++PR+ TG+ RGF FV+Y+YA++A +A+ R
Sbjct: 48 GLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKR 107
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 115
++ +V+ GREI + FA+ N + Q+ R +S G
Sbjct: 108 MNHKVIGGREIAIVFAE--ENRKTPQEMRTTNGTSGRHG 144
>gi|116831499|gb|ABK28702.1| unknown [Arabidopsis thaliana]
Length = 237
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LL+ N+ +DL FE++G + D+++PR+ TG+ RGF FV+Y+YA++A +A+ R
Sbjct: 48 GLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKR 107
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 115
++ +V+ GREI + FA+ N + Q+ R +S G
Sbjct: 108 MNHKVIGGREIAIVFAE--ENRKTPQEMRTTNGTSGRHG 144
>gi|119609847|gb|EAW89441.1| splicing factor, arginine/serine-rich 2, isoform CRA_b [Homo
sapiens]
Length = 208
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 13/87 (14%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D V+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDT-------------VYIPRDRYTKESRGFAFVRFHDKR 53
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYG 95
+A+ A+D +DG V+DGRE+ VQ A+YG
Sbjct: 54 DAEDAMDAMDGAVLDGRELRVQMARYG 80
>gi|449283101|gb|EMC89804.1| Splicing factor, arginine/serine-rich 2 [Columba livia]
Length = 182
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDGRV 81
+A+ A+D +DG V
Sbjct: 67 DAEDAMDAMDGAV 79
>gi|380791457|gb|AFE67604.1| serine/arginine-rich splicing factor 8, partial [Macaca mulatta]
Length = 86
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHNRR 66
Query: 69 EAQKAVDRLDGRVVDGREI 87
+A+ A D +DG +DGRE+
Sbjct: 67 DAEDAEDAMDGAELDGREL 85
>gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens]
Length = 179
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDG 79
+A+ A+D +DG
Sbjct: 67 DAEDAMDAMDG 77
>gi|302834399|ref|XP_002948762.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
gi|300265953|gb|EFJ50142.1| hypothetical protein VOLCADRAFT_73973 [Volvox carteri f.
nagariensis]
Length = 274
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+R+ S+LV NI TA+DL FEK+G++ DV+IPRD T SRGF F+ ++ A +A
Sbjct: 17 VRNKVSVLVRNIPLNYTAEDLRAKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDAD 76
Query: 72 KAVDRLDGRVVDGREITVQFAKYG 95
+A+ + D ++DGREI V +K G
Sbjct: 77 EAIYQTDRTMLDGREINVCLSKEG 100
>gi|348671618|gb|EGZ11439.1| hypothetical protein PHYSODRAFT_435859 [Phytophthora sojae]
Length = 92
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 60/84 (71%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
P++ + ++L V N+ F+ +D+L LF K+G++ DV+IPR R + +SRGFAFVR+ +
Sbjct: 1 PNVDNMFTLKVDNVPFQIGSDELRDLFSKFGEIGDVYIPRARGSNESRGFAFVRFMEKRD 60
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
A+ A++ ++G+ GR++ VQFAK
Sbjct: 61 AEDAIEGMEGQEFQGRDLRVQFAK 84
>gi|9843655|emb|CAC03601.1| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana]
Length = 236
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL FE++G + D+++PR+ +G+ RGF FV+Y+YA++A +A+ R+
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNFNSGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKG 115
+ +V+ GREI + FA+ N + Q+ R +S G
Sbjct: 109 NHKVIGGREIAIVFAEE--NRKTPQEMRTTNGTSGRHG 144
>gi|326532152|dbj|BAK01452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 208
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 86/163 (52%), Gaps = 8/163 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F ++G++ DV+IPRD T + RGF FV+Y D+A A
Sbjct: 39 SLLVRNLRRDCRPDDLRRPFAQFGRLKDVYIPRDYYTQEPRGFGFVQYFDPDDAADAKYY 98
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRS--RSRSPRPRYRDEHRDKD 134
+DG+V+ GRE+ V FA+ N +K + R ES S+GRS + SP PR R +R +
Sbjct: 99 MDGQVILGREVAVVFAQE--NRKKPAEMRTRES---SRGRSYDQRHSPSPRGRPSYRGRS 153
Query: 135 YRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHG 177
Y R R R RD + R S SRS SP +G
Sbjct: 154 YSRSPSPRPARRRFRDESPLRSRSP-VDSGSRSVSPPLDGKYG 195
>gi|412988955|emb|CCO15546.1| Splicing factor, arginine/serine-rich 2 [Bathycoccus prasinos]
Length = 296
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 54/88 (61%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
K GPPDI + +S+ + N++F T +++ +F YG++ DV++PR+ T RGFAFVRY
Sbjct: 48 KKGPPDISNLHSVKIDNLSFDLTQEEITDMFASYGEIGDVYVPRNHHTQRMRGFAFVRYV 107
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK 93
A A+D + + + GR I V A+
Sbjct: 108 EKQSADAAIDAMHEKEIAGRIIRVGMAE 135
>gi|119609848|gb|EAW89442.1| splicing factor, arginine/serine-rich 2, isoform CRA_c [Homo
sapiens]
Length = 163
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRLDG 79
+A+ A+D +DG
Sbjct: 67 DAEDAMDAMDG 77
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 91/171 (53%), Gaps = 26/171 (15%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++PRD TG+ RGF FV+Y +A +A +
Sbjct: 39 SLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQ 98
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSR-----------SRSPRPR 125
+DG+++ GRE+TV FA+ N +K R E +GR R SRSP PR
Sbjct: 99 MDGQILHGRELTVVFAEE--NRKKPSDMRARE-----RGRGRFYDRRRSPLRYSRSPPPR 151
Query: 126 Y-RDEHRDKDY-----RRRSRSRSRERYDR--DRYRSKERDHRRRSRSRSA 168
+ R R +DY +RR SRS DR R RS D RRRS +RS
Sbjct: 152 HARSPSRGRDYYSPSPKRRQYSRSVSPQDRRYSRDRSYTPDGRRRSYTRSP 202
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ FR + +DL LFE+YG+V ++ + D+ TG SRGFAFV + + AQ A+D L
Sbjct: 6 LYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQSAIDSL 65
Query: 78 DGRVVDGREITVQFAK 93
+G + GR+I V AK
Sbjct: 66 NGTSISGRQIVVNEAK 81
>gi|449017398|dbj|BAM80800.1| similar to SR family splicing factor SC35 [Cyanidioschyzon merolae
strain 10D]
Length = 194
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
+++++ L+V NI F T +DL LF YG V+D+FIP DR+ RGFAFVR + ++A
Sbjct: 64 ELQNSVGLMVRNIPFGTRQEDLLELFRPYGDVIDIFIPWDRQLRRIRGFAFVRLQTLEQA 123
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
+ A+ LDG + R I V+ A+Y
Sbjct: 124 EAAIAALDGSTMRERIIAVKRAEY 147
>gi|255582554|ref|XP_002532060.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528264|gb|EEF30315.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 246
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G + D+++PRD TG+ RGF FV+Y +A +A
Sbjct: 43 SLLVRNLRHDCRPEDLRRPFEQFGALKDIYLPRDYYTGEPRGFGFVQYADPQDAAEAKHH 102
Query: 77 LDGRVVDGREITVQFAK 93
+DGRV+ GRE+TV FA+
Sbjct: 103 MDGRVLLGRELTVVFAE 119
>gi|302844725|ref|XP_002953902.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
gi|300260714|gb|EFJ44931.1| hypothetical protein VOLCADRAFT_121229 [Volvox carteri f.
nagariensis]
Length = 294
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL N++ TTADDL E++G + D+++P+D TGD RG FV + +A++A
Sbjct: 30 SLLFRNLSKTTTADDLRHTTERFGPIRDIYLPKDFYTGDPRGLGFVEFSDPKDAEEARHS 89
Query: 77 LDGRVVDGREITVQFAKYG 95
LDG + GR I+VQFA++G
Sbjct: 90 LDGSTLAGRVISVQFAQHG 108
>gi|116782736|gb|ABK22635.1| unknown [Picea sitchensis]
Length = 275
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +D+L FE++G + DV++P+D TG+ RGF FV++ +A +A
Sbjct: 37 SLLVRNIPRDCRSDELRMPFERFGPLKDVYLPKDFYTGEPRGFGFVQFMDPQDAAEAQYH 96
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRD-------- 128
+DG+ + GREITV A+ N +K + R+ S+ +G R R P Y
Sbjct: 97 MDGQYIGGREITVVLAEK--NRKKPDEMRVRTSARAPRGYGRRRR-SPHYARSRSRSRSL 153
Query: 129 EHRDKDYRRRSRSRS 143
EHR YR RSRS
Sbjct: 154 EHRSTSYRGGHRSRS 168
>gi|226493261|ref|NP_001151991.1| LOC100285628 [Zea mays]
gi|195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|448878242|gb|AGE46084.1| arginine/serine-rich splicing factor SCL25B transcript I [Zea mays]
gi|448878246|gb|AGE46086.1| arginine/serine-rich splicing factor SCL25B transcript III [Zea
mays]
gi|448878250|gb|AGE46088.1| arginine/serine-rich splicing factor SCL25B transcript V [Zea mays]
gi|448878254|gb|AGE46090.1| arginine/serine-rich splicing factor SCL25B transcript VII [Zea
mays]
gi|448878256|gb|AGE46091.1| arginine/serine-rich splicing factor SCL25B transcript VIII [Zea
mays]
Length = 209
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 19/158 (12%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G+V D+++PRD TGD RGF FV+Y +A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYY 97
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQ----GRIVESSSKSKGRSRSRSPRPRYRDEHRD 132
+DG+VV GR+ITV FA+ N +K Q+ R+ S + SRSRSP
Sbjct: 98 MDGQVVLGRQITVVFAE--ENRKKPQEMRARDRVRGHSYDDRRYSRSRSP---------- 145
Query: 133 KDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASP 170
YR RS SRS + Y R ++ HR R RS S SP
Sbjct: 146 HYYRGRSPSRS-QSYSRSPPQNPR--HRLRERSYSGSP 180
>gi|432113367|gb|ELK35779.1| Serine/arginine-rich splicing factor 2 [Myotis davidii]
Length = 218
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 50/69 (72%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKR 66
Query: 69 EAQKAVDRL 77
+A+ A+D +
Sbjct: 67 DAEDAMDAM 75
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL+V N+ A+DL FEKYG++ DV+IPRD T RGF FV +K +A+ A+
Sbjct: 18 SLVVRNLPLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDAMYS 77
Query: 77 LDGRVVDGREITVQFAKYG 95
LD ++GREI+V F++ G
Sbjct: 78 LDRSTINGREISVTFSREG 96
>gi|225451102|ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
gi|298205010|emb|CBI34317.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI +DL FE++G V DV++P++ TG+ RGF FV+++ A++A +A L
Sbjct: 46 LLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAKHHL 105
Query: 78 DGRVVDGREITVQFAK 93
+ V+ GREI + FA+
Sbjct: 106 NHSVIGGREIAIVFAE 121
>gi|357478559|ref|XP_003609565.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510620|gb|AES91762.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 314
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV N+ +DL FE+YG V DV++PR+ TG+ RGF FV+Y++ ++A +A +
Sbjct: 49 GLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQ 108
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIV 107
L+ ++ GREI + FA+ N + Q+ R+
Sbjct: 109 LNHTIIGGREIRIVFAEE--NRKTPQEMRVT 137
>gi|411119198|ref|ZP_11391578.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711061|gb|EKQ68568.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 104
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
S+ V N++F+ T DDL F +YGKVV V +P+DR TG RGFAFV E A+D
Sbjct: 1 MSVYVGNLSFKVTEDDLVETFSEYGKVVSVQLPKDRETGRMRGFAFVEMSSETEEAAAID 60
Query: 76 RLDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 61 ALDGAEWMGRDLKVNKAK 78
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 83/168 (49%), Gaps = 22/168 (13%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ T +DL F +G + DV++PRD TG+ RGF FV+Y +A A
Sbjct: 40 SLLVRNLHRDTRTEDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYH 99
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYR 136
LDG+++ GRE+TV FA E + K R+R R+ R DYR
Sbjct: 100 LDGQILLGRELTVVFA---------------EENRKKPAEMRARE---RHSTRERSYDYR 141
Query: 137 RRSRSRSR-ERYDRDRYRSKE--RDHRRRSRSRSASPDRHKNHGRGKY 181
R R SR RY R RS + RR S+S SP R + +GR Y
Sbjct: 142 RSPRGYSRSPRYARTYSRSPDYTPSPRRWRYSKSISP-RDRRYGRRSY 188
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
DI ++ L + N+++ TT DD+ FE +GK+ +V+IP DR + S+G AFV + ++A
Sbjct: 319 DIGESGRLFIRNLSYTTTEDDIKKFFEAHGKLSEVYIPIDRDSKKSKGIAFVLFMIPEQA 378
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAE 99
+A + LDG+ + GR I + AK P+ E
Sbjct: 379 MRAANDLDGKTLQGRIIHILAAKNAPSKE 407
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
+ NI F ++ LF YG++ V +P + TG RGF FV Y EA+ A++ L
Sbjct: 766 IKNIAFECKPIEIRKLFTTYGELKSVRLP-SKPTGGHRGFGFVEYLTEQEAKNAMEALQN 824
Query: 80 RVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRS 121
+ GR + + FA+ N E++++ V+ SK+ G +RS++
Sbjct: 825 SHLYGRHLILSFAEEDKNIEQLREKASVD-YSKASGTNRSKN 865
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
gi|222865325|gb|EEF02456.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+++ SLLV NI D+L FE++G V DV+IP+D TG+ RGFAFV++ EA +
Sbjct: 3 QNSGSLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEAME 62
Query: 73 AVDRLDGRVVDGREITVQFA 92
A R++G++ GR+I+V A
Sbjct: 63 AQHRMNGQIFAGRQISVVLA 82
>gi|323455941|gb|EGB11808.1| hypothetical protein AURANDRAFT_9375, partial [Aureococcus
anophagefferens]
Length = 79
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 45/73 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI+F T DL LF YGKV D F+P +R TG RGFAFV + EAQ A+ L
Sbjct: 4 LYVGNISFDMTQQDLNGLFGPYGKVTDAFLPTERETGRPRGFAFVTFSSPAEAQAAIADL 63
Query: 78 DGRVVDGREITVQ 90
DG+ +DGR + V
Sbjct: 64 DGKEIDGRALRVN 76
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +D+ F+K+G V DV++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 77 LDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 96 MNRKMLSGREISVAFA 111
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF F+++ +A +A +
Sbjct: 38 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQ 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 98 MDGYLLLGRELTVVFAE 114
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +D+ F+K+G V DV++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 36 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 95
Query: 77 LDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 96 MNRKMLSGREISVAFA 111
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 62/102 (60%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K+++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKVKEGRNV 104
>gi|326437616|gb|EGD83186.1| hypothetical protein PTSG_03817 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 58/88 (65%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
G PD+ + +S+ V NI T +DL F+++G++ D+++PR R T D RG+AFVR+
Sbjct: 4 GGRPDVSNLFSVKVDNIDRSTREEDLREAFKEFGEIGDIYMPRYRDTMDPRGYAFVRFIN 63
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKY 94
+A+ A+ +DG+ ++G+E+ Q AKY
Sbjct: 64 ERDAEDAIKHMDGQQLNGKEVYCQLAKY 91
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R SLLV NI+ R +D+ FE+YG+V DV+IP+D T + +GFAFV ++ EA+
Sbjct: 4 RGGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAED 63
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A LDG +DGR+I V FA+
Sbjct: 64 ARRNLDGVRIDGRDIRVVFAQ 84
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+TFRT DD+ +F +G V DV++P D T RGFAFV + +A A DR
Sbjct: 34 SLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDR 93
Query: 77 LDGRVVDGREITVQFAK 93
LDG +DGR I+V +A+
Sbjct: 94 LDGYNLDGRNISVLYAQ 110
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF F++Y +A +A
Sbjct: 38 SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQYVDPADAAEAKHH 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG + GRE+TV FA+
Sbjct: 98 MDGSHLLGRELTVVFAE 114
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|323448916|gb|EGB04809.1| hypothetical protein AURANDRAFT_17068, partial [Aureococcus
anophagefferens]
Length = 112
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
+ S+LV N+TF+ + +DL FEK+G V DV+IP D T + RGFAF+ EA +A
Sbjct: 11 EGVSVLVRNLTFKLSKEDLREEFEKFGSVKDVYIPLDYMTREPRGFAFIEMSCKAEADEA 70
Query: 74 VDRLDGRVVDGREITVQFA 92
+ LDG+ +DGR I V A
Sbjct: 71 IAGLDGKDLDGRVIKVLLA 89
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIVESSSK 112
+A+ A+ LD + + GR++ +QFA+ PN K ++GR V SSS+
Sbjct: 63 DAEDALRNLDRKWICGRQMEIQFAQGDRKTPNQMKAKEGRNVYSSSR 109
>gi|159471227|ref|XP_001693758.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283261|gb|EDP09012.1| predicted protein [Chlamydomonas reinhardtii]
Length = 86
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV NI T DDL FEK+G++ DV+IPRD T SRGF F+ ++ A +A +A+ +
Sbjct: 1 SVLVRNIPLHMTVDDLRKKFEKFGELRDVYIPRDYYTQRSRGFGFIEFRDARDADEAIYQ 60
Query: 77 LDGRVVDGREITVQFAKYG 95
LD +DGREI V +K G
Sbjct: 61 LDKTSIDGREINVCLSKEG 79
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKCICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|449432785|ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
gi|449495419|ref|XP_004159835.1| PREDICTED: uncharacterized LOC101216537 [Cucumis sativus]
Length = 248
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV N+ +DL FE++G V DV++P++ TG+ RGF FV++++A++A +A +L
Sbjct: 52 LLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAKQQL 111
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIV 107
+ V+ GREI + FA+ N + Q+ R+
Sbjct: 112 NHTVIGGREIRIVFAEE--NRKTPQEMRVT 139
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIVESSSK 112
+A+ A+ LD + + GR+I +QFA+ PN K ++GR SS+
Sbjct: 63 DAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEGRSTYGSSR 109
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIVESSSK 112
+A+ A+ LD + + GR+I +QFA+ PN K ++GR SS+
Sbjct: 63 DAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKEGRSTYGSSR 109
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL+V N+ +DL FEKYG++ DV+IPRD T RGF F+ +K +A+ A+
Sbjct: 52 SLVVRNLPLDIRMEDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYN 111
Query: 77 LDGRVVDGREITVQFAKYG 95
LD VV+GREI+V F++ G
Sbjct: 112 LDRSVVNGREISVTFSREG 130
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ + T + L F +YG+VVD + +DR TG SRGF F+ + D+AQ A+D L
Sbjct: 7 LFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAAIDAL 66
Query: 78 DGRVVDGREITVQFAK 93
+ VDGR I V FA
Sbjct: 67 NEADVDGRNIRVNFAT 82
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|47497118|dbj|BAD19168.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|47497696|dbj|BAD19762.1| putative pre-mRNA splicing factor [Oryza sativa Japonica Group]
gi|66394215|gb|AAG43284.2| pre-mRNA splicing factor [Oryza sativa]
gi|113535979|dbj|BAF08362.1| Os02g0252100 [Oryza sativa Japonica Group]
gi|215704460|dbj|BAG93894.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV++P+D TG+ RGFAFV + +A +A
Sbjct: 38 SLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYH 97
Query: 77 LDGRVVDGREITVQFA 92
++ +VV GREITV A
Sbjct: 98 MNRQVVFGREITVVLA 113
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223527045|gb|EEF29231.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 265
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L FE++G V DV+IP+D TG+ RGFAFV++ +A +A R
Sbjct: 44 SLLVRNIPLDCRPEELRAPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHR 103
Query: 77 LDGRVVDGREITVQFA 92
++G++ GREI+V A
Sbjct: 104 MNGQIFAGREISVVVA 119
>gi|357121831|ref|XP_003562621.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 205
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 89/160 (55%), Gaps = 18/160 (11%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ DV+IPRD T + RGF FV+Y ++A A
Sbjct: 39 SLLVRNLRRDCRPEDLRRPFGQFGRLKDVYIPRDYYTREPRGFGFVQYFDPEDAADAKYY 98
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRS--RSRSPRPRYRDEHRDKD 134
+DG+VV GREI V FA+ N + + R ES S+GRS R RS PR R R +
Sbjct: 99 MDGQVVLGREIAVVFAQE--NRKHPSEMRTRES---SRGRSYDRRRSLSPRGRSPFRGRS 153
Query: 135 YRRRSRSRSRERYDRDRYRSKERDHRRRS----RSRSASP 170
Y SRS S RY+R R+R D RS RSRS SP
Sbjct: 154 Y---SRSPS-PRYERRRFRE---DSYSRSPVDGRSRSGSP 186
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|149924767|ref|ZP_01913111.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
gi|149814351|gb|EDM73949.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
Length = 155
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G SGPP L V +++ T +D L LF K G VVD I DR TGDSRGF FV
Sbjct: 70 GNSGPP-----CRLFVGGLSWDTESDSLRELFAKVGAVVDAMIVTDRDTGDSRGFGFVTM 124
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFA 92
+A KA+ L G +DGR I + A
Sbjct: 125 ANRKDATKAMKELGGTELDGRSIRIDLA 152
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ FR + +DL +FE+YG+V ++ + D+ TG SRGFAFV + + AQ A++ L
Sbjct: 49 LYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQSAINNL 108
Query: 78 DGRVVDGREITVQFAK 93
+G V GR+I V AK
Sbjct: 109 NGSSVSGRQIVVNEAK 124
>gi|115453135|ref|NP_001050168.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|108708312|gb|ABF96107.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548639|dbj|BAF12082.1| Os03g0363800 [Oryza sativa Japonica Group]
gi|215737124|dbj|BAG96053.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 243
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G V DV++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|357112195|ref|XP_003557895.1| PREDICTED: uncharacterized protein LOC100829528 [Brachypodium
distachyon]
Length = 244
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 52/77 (67%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV NI+ +D+ FE++G + DV++PR+ T + RGF FV+++Y+++A A
Sbjct: 59 GLLVRNISLTARLEDIRGPFEQFGPIKDVYLPRNFHTKELRGFGFVKFRYSEDAAYAKQE 118
Query: 77 LDGRVVDGREITVQFAK 93
L+ +V+ GREI++ FA+
Sbjct: 119 LNHQVICGREISIVFAE 135
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica Group]
Length = 289
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV++P+D TG+ RGFAFV + +A +A
Sbjct: 62 SLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYH 121
Query: 77 LDGRVVDGREITVQFA 92
++ +VV GREITV A
Sbjct: 122 MNRQVVFGREITVVLA 137
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ + SLLV N+ F T+ + FE+YG V DV++P D T RGF FV Y +A
Sbjct: 85 DVSEGCSLLVRNLRFETSPGRVRHHFERYGPVRDVYLPLDYYTRRPRGFGFVEYMDPRDA 144
Query: 71 QKAVDRLDGRVVDGREITVQFA 92
Q AV+RLDG ++DG I V A
Sbjct: 145 QDAVNRLDGSLLDGSTIRVVVA 166
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa Japonica Group]
Length = 304
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV++P+D TG+ RGFAFV + +A +A
Sbjct: 77 SLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYH 136
Query: 77 LDGRVVDGREITVQFA 92
++ +VV GREITV A
Sbjct: 137 MNRQVVFGREITVVLA 152
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|358248974|ref|NP_001239716.1| uncharacterized protein LOC100816913 [Glycine max]
gi|255645650|gb|ACU23319.1| unknown [Glycine max]
Length = 205
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + DV++PRD TG+ RGF FV+Y +A A
Sbjct: 41 SLLVRNLNRDCRPEDLHGPFGQFGPLKDVYLPRDYYTGEPRGFGFVQYVDPADAADAKYH 100
Query: 77 LDGRVVDGREITVQFAK 93
+DGR++ GREITV FA+
Sbjct: 101 MDGRILLGREITVVFAE 117
>gi|300122958|emb|CBK23965.2| unnamed protein product [Blastocystis hominis]
Length = 173
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P D+ +S+ + N+ T +DL FEKYGK+ D++IPR+ G +RGF FVRY D
Sbjct: 7 PTDVNSLFSVRIDNLPNDATKEDLNNHFEKYGKIADIYIPRNTHDGGNRGFGFVRYVNED 66
Query: 69 EAQKAVDRLDGRVVDGREITVQFA 92
EA+KA+D +G ++G+ + V A
Sbjct: 67 EARKALDE-NGEELNGQTMRVSMA 89
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL FE++G V D+++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 97 MDGYLLLGRELTVVFAE 113
>gi|449442606|ref|XP_004139072.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449528235|ref|XP_004171111.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 285
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N++ +DL F ++G + D+++P+D TG+ RGF FV+Y +A A
Sbjct: 37 SLLVRNLSHDCRPEDLRRPFGQFGAIKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKHH 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG V+ GRE+TV FA+
Sbjct: 97 MDGCVLLGRELTVVFAE 113
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V + F TT + L LFE YGKV V I +DR TG RGFAFV EA KA++
Sbjct: 3 SIFVAKLDFNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIEA 62
Query: 77 LDGRVVDGREITVQFA 92
LD V+GR I V+ A
Sbjct: 63 LDDSSVNGRNIAVKKA 78
>gi|125586354|gb|EAZ27018.1| hypothetical protein OsJ_10948 [Oryza sativa Japonica Group]
Length = 254
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G V DV++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|194688600|gb|ACF78384.1| unknown [Zea mays]
gi|194700100|gb|ACF84134.1| unknown [Zea mays]
gi|219887871|gb|ACL54310.1| unknown [Zea mays]
gi|224035011|gb|ACN36581.1| unknown [Zea mays]
gi|238908719|gb|ACF81490.2| unknown [Zea mays]
gi|448878248|gb|AGE46087.1| arginine/serine-rich splicing factor SCL25B transcript IV [Zea
mays]
Length = 209
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G+V D+++PRD TGD RGF FV+Y +A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYY 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+VV GR+ITV FA+
Sbjct: 98 MDGQVVLGRQITVVFAE 114
>gi|225449547|ref|XP_002283722.1| PREDICTED: uncharacterized protein LOC100258210 [Vitis vinifera]
Length = 276
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL FE++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 41 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 100
Query: 77 LDGRVVDGREITVQFA 92
++G++ GREI+V A
Sbjct: 101 MNGQIFAGREISVVVA 116
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|389593931|ref|XP_003722214.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|321438712|emb|CBZ12472.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 639
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 50/85 (58%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P R +L V + T DD+ LFE+YG ++ + RD TG+S G AFVRY D
Sbjct: 59 PKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHD 118
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
EA A+ LDGR + GR I++Q+AK
Sbjct: 119 EASAAMAALDGRELYGRPISIQWAK 143
>gi|125543974|gb|EAY90113.1| hypothetical protein OsI_11679 [Oryza sativa Indica Group]
Length = 254
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G V DV++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|398018793|ref|XP_003862561.1| RNA-binding protein, putative [Leishmania donovani]
gi|322500791|emb|CBZ35868.1| RNA-binding protein, putative [Leishmania donovani]
Length = 639
Score = 70.1 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P R +L V + T DD+ LFE+YG ++ + RD TG+S G AFVRY D
Sbjct: 59 PKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHD 118
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
EA+ A+ LDGR + GR I++Q+AK
Sbjct: 119 EARAAMAALDGRELYGRPISIQWAK 143
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDLKTPNQMKAKEGRNV 104
>gi|195631119|gb|ACG36660.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich 4 [Zea mays]
gi|195645762|gb|ACG42349.1| splicing factor, arginine/serine-rich 4 [Zea mays]
Length = 209
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G+V D+++PRD TGD RGF FV+Y +A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRVKDIYLPRDYYTGDPRGFGFVQYYDPADAADAKYY 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+VV GR+ITV FA+
Sbjct: 98 MDGQVVLGRQITVVFAE 114
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
G IR ++ V N++F+ T ++L FE+YG+V V I DR TG SRGFAFV A
Sbjct: 58 GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADA 117
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+ A+ A++ L+G +DGR +TV A+
Sbjct: 118 EGAKDAIENLNGHEIDGRSVTVNEAR 143
>gi|145346140|ref|XP_001417551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577778|gb|ABO95844.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 92
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV NI+F DD+ F+ YG V+DV++P+DR TG RG AFV+Y EA AV++
Sbjct: 2 SVLVRNISFDAHEDDIRDKFQAYGNVLDVYMPKDRETGRKRGLAFVKYAIQGEADDAVEK 61
Query: 77 LDGRVVDGREITVQFAK 93
G + GRE+ + A
Sbjct: 62 ATGMDIMGREVRCEIAN 78
>gi|427794309|gb|JAA62606.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 412
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
+ PP+ L V + TT +DL +F ++G V + RDR+TGDS +AFV ++
Sbjct: 153 AAPPE----NVLFVCKLNPVTTDEDLEIIFSRFGPVKSCEVIRDRKTGDSLQYAFVEFEQ 208
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRY 126
+ + A ++D ++D R I V F++ +GR VE + KG + R R
Sbjct: 209 REHCENAFFKMDNVLIDDRRIHVDFSQSVAKLRWKGKGRGVEYINDDKGGKKPRGARYEL 268
Query: 127 RD-------------------EHRDKDYRRRSRS-RSRERYDRDRYRSKERDHRRRSRSR 166
+D E KD ++ R+ RS++ ++ ++ + +D + SRS
Sbjct: 269 KDTARRGGAGGQYDLVWSDNEEEGGKDTNQKERNERSQKDRKKESHKDRYKDDHKDSRSG 328
Query: 167 SASPDRHKNHGRGKYDEERRSRSRSYER 194
DRH + RG++++ RRS R ER
Sbjct: 329 GHKDDRHADSRRGRHEDSRRSSHRDQER 356
>gi|372863947|gb|AEX99749.1| putative serine/arginine-rich protein SCL subfamily member
[Saccharum hybrid cultivar]
Length = 209
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ D+++PRD TG+ RGF FV+Y D+A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYEPDDAADAKYY 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+VV GR+ITV FA+
Sbjct: 98 MDGQVVLGRQITVVFAE 114
>gi|146093095|ref|XP_001466659.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071022|emb|CAM69702.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 639
Score = 69.7 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P R +L V + T DD+ LFE+YG ++ + RD TG+S G AFVRY D
Sbjct: 59 PKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHD 118
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
EA+ A+ LDGR + GR I++Q+AK
Sbjct: 119 EARAAMAALDGRELYGRPISIQWAK 143
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
gi|241937164|gb|EES10309.1| hypothetical protein SORBIDRAFT_05g027700 [Sorghum bicolor]
Length = 270
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ SLLV NI R ++L FE++G V DV++PRD TG+ RGF FV + A +A +A
Sbjct: 39 SVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQ 98
Query: 75 DRLDGRVVDGREITVQFA 92
++ ++ GREITV A
Sbjct: 99 YHMNRQMFAGREITVVLA 116
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQIKAKEGRNV 104
>gi|448878332|gb|AGE46129.1| arginine/serine-rich splicing factor SCL31 [Sorghum bicolor]
Length = 270
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ SLLV NI R ++L FE++G V DV++PRD TG+ RGF FV + A +A +A
Sbjct: 39 SVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQ 98
Query: 75 DRLDGRVVDGREITVQFA 92
++ ++ GREITV A
Sbjct: 99 YHMNRQMFAGREITVVLA 116
>gi|303668381|gb|ADM16300.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 121
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L V ++F TT + L F KYG + V + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+D ++G+ VDGR I V
Sbjct: 61 DALDGMNGKSVDGRTIRV 78
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ SLLV NI R ++L FE++G V DV++PRD TG+ RGF FV + A +A +A
Sbjct: 37 SVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQ 96
Query: 75 DRLDGRVVDGREITVQFA 92
++ ++ GREITV A
Sbjct: 97 YHMNRQMFAGREITVVLA 114
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
G IR ++ V N++F+ T ++L FE+YG+V V I DR TG SRGFAFV A
Sbjct: 47 GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADA 106
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+ A+ A++ L+G +DGR +TV A+
Sbjct: 107 EGAKDAIENLNGHEIDGRSVTVNEAR 132
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
G IR ++ V N++F+ T ++L FE+YG+V V I DR TG SRGFAFV A
Sbjct: 47 GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADA 106
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+ A+ A++ L+G +DGR +TV A+
Sbjct: 107 EGAKDAIENLNGHEIDGRSVTVNEAR 132
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
G IR ++ V N++F+ T ++L FE+YG+V V I DR TG SRGFAFV A
Sbjct: 47 GLQGIRLVTNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADA 106
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+ A+ A++ L+G +DGR +TV A+
Sbjct: 107 EGAKDAIENLNGHEIDGRSVTVNEAR 132
>gi|449459926|ref|XP_004147697.1| PREDICTED: uncharacterized protein LOC101221788 [Cucumis sativus]
Length = 286
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L FE++G V DV+IP+D TG+ RGFAFV + EA +A
Sbjct: 52 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 111
Query: 77 LDGRVVDGREITVQFA 92
++G+ GREITV A
Sbjct: 112 MNGKKFAGREITVVLA 127
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR +
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNL 104
>gi|255639915|gb|ACU20250.1| unknown [Glycine max]
Length = 270
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV N+ +DL FE+YG V DV++P++ TG+ RGF FV+Y+Y ++A +A
Sbjct: 50 GLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAKQH 109
Query: 77 LDGRVVDGREITVQFAK 93
L+ ++ GREI + FA+
Sbjct: 110 LNHTIIGGREIRIVFAE 126
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ SLLV NI R ++L FE++G V DV++PRD TG+ RGF FV + A +A +A
Sbjct: 37 SVSLLVRNIPLRCRPEELRVPFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQ 96
Query: 75 DRLDGRVVDGREITVQFA 92
++ ++ GREITV A
Sbjct: 97 YHMNRQMFAGREITVVLA 114
>gi|401415854|ref|XP_003872422.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488646|emb|CBZ23893.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 638
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 51/85 (60%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P R +L V + T DD+ LFE+YG ++ + RD TG+S G AFVRY D
Sbjct: 58 PKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGESLGTAFVRYSTHD 117
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
EA+ A+ LDGR + GR I++Q+AK
Sbjct: 118 EARAAMAALDGRELYGRPISIQWAK 142
>gi|255548387|ref|XP_002515250.1| RNA binding protein, putative [Ricinus communis]
gi|223545730|gb|EEF47234.1| RNA binding protein, putative [Ricinus communis]
Length = 564
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 5 GKSGPPDIR---DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF 61
G+ G PD + L V + TT +++ PLFE +G +V+V +PRDRR+G +G+ F
Sbjct: 118 GRPGSPDHNLDAASVKLFVAPVPIPTTIENICPLFEAHGSIVEVILPRDRRSGQQQGYCF 177
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREI 87
V+Y +EA +A+ L+G+ E+
Sbjct: 178 VKYATIEEADRAIRALNGQYTIPGEV 203
>gi|224102541|ref|XP_002312718.1| predicted protein [Populus trichocarpa]
gi|222852538|gb|EEE90085.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 52/76 (68%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ N+ +DL FEK+G + D+++P++ TG+ RGF FV+Y+++++A +A R+
Sbjct: 42 LLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAKQRM 101
Query: 78 DGRVVDGREITVQFAK 93
D + + GREI + FA+
Sbjct: 102 DHKTIGGREIRIVFAE 117
>gi|115473547|ref|NP_001060372.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa Japonica
Group]
gi|113611908|dbj|BAF22286.1| Os07g0633200 [Oryza sativa Japonica Group]
gi|215692446|dbj|BAG87866.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 213
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ D++IPRD +G+ RGF FV+Y D+A A
Sbjct: 39 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYY 98
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRS----RSRSPR 123
+DG+V+ GRE+ V FA+ N +K + R + S S+GRS SRSPR
Sbjct: 99 MDGQVILGREVAVVFAEE--NRKKPSEMRSRDRISGSRGRSYDQRYSRSPR 147
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|108708411|gb|ABF96206.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 218
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G+V D+++PRD TG+ RGF F++Y ++A A
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYH 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+++ GRE+TV FA+
Sbjct: 98 MDGQILLGREVTVVFAE 114
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V N+++ TT D L F +YG VVD + RDR TG SRGF FV Y +EA A+ L
Sbjct: 5 IYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISGL 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+ +DGR+I V A P
Sbjct: 65 NETSLDGRQIKVNLANARP 83
>gi|255581554|ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 216
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 30/161 (18%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F +G + D+++PRD TG+ RGF FV+Y +A A
Sbjct: 41 SLLVRNLRHDCRTEDLRGPFGHFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAADAKHH 100
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRS--RSRSPR-----PRYRDE 129
+DG ++ GRE+TV FA+ N +K + R E + +GRS R RSP+ PRY
Sbjct: 101 MDGEILLGRELTVVFAE--ENRKKPAEMRARE---RVRGRSYDRKRSPQCYSRSPRY--- 152
Query: 130 HRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASP 170
RRS SRS Y R R+R+ SRS SP
Sbjct: 153 -------RRSYSRSPLYY--------SRSPRQRNYSRSISP 178
>gi|218200082|gb|EEC82509.1| hypothetical protein OsI_26989 [Oryza sativa Indica Group]
Length = 216
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ D++IPRD +G+ RGF FV+Y D+A A
Sbjct: 42 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYY 101
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRS----RSRSPR 123
+DG+V+ GRE+ V FA+ N +K + R + S S+GRS SRSPR
Sbjct: 102 MDGQVILGREVAVVFAEE--NRKKPSEMRSRDRISGSRGRSYDQRYSRSPR 150
>gi|31249706|gb|AAP46199.1| putative splicing factor [Oryza sativa Japonica Group]
gi|108708412|gb|ABF96207.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|218192921|gb|EEC75348.1| hypothetical protein OsI_11773 [Oryza sativa Indica Group]
gi|222625002|gb|EEE59134.1| hypothetical protein OsJ_11026 [Oryza sativa Japonica Group]
Length = 217
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G+V D+++PRD TG+ RGF F++Y ++A A
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYH 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+++ GRE+TV FA+
Sbjct: 98 MDGQILLGREVTVVFAE 114
>gi|403308741|ref|XP_003944810.1| PREDICTED: uncharacterized protein LOC101031882, partial [Saimiri
boliviensis boliviensis]
Length = 346
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD+ +L V N+T+RT+ D L +FEKYG+V DV+IPR+ T RGFAFVR+
Sbjct: 113 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQR 172
Query: 69 EAQKAVDRLDGRVVD 83
+A+ A +DG +D
Sbjct: 173 DAEDAEAAMDGAELD 187
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
SL V N+T +D+ F+K+G V DV++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 330 AVSLFVSNLTRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKAR 389
Query: 75 DRLDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 390 YHMNRKMLSGREISVAFA 407
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 77 LDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
LD + + GR+I +QFA+ PN K ++GR +
Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNL 104
>gi|359487440|ref|XP_002267230.2| PREDICTED: uncharacterized protein LOC100259677 [Vitis vinifera]
Length = 225
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++PRD TG+ RGF FV+Y +A +A +
Sbjct: 37 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPRDYYTGEPRGFGFVQYVDPADAAEAKYQ 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG+V+ GRE+TV FA+
Sbjct: 97 MDGQVLLGRELTVVFAE 113
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + ++F T D L F KYG + V + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+D ++G+ +DGR I V
Sbjct: 61 DALDAMNGKTLDGRAIRV 78
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + N+ F T +DL L E +G++ DV + RDR +G SRGF F R+K AQ+A+D L
Sbjct: 314 IFIRNLGFNVTFEDLEKLLEPFGELEDVHLVRDRESGQSRGFGFARFKTVTSAQQAMDAL 373
Query: 78 DGRVVDGREITVQ 90
DG V GR + +
Sbjct: 374 DGSVYQGRLLHIM 386
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
P+ + L++ NI F + +L LF +G V + +P+ + G RGF FV Y E
Sbjct: 732 PEAGNETKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPK-KVDGSGRGFCFVEYATPQE 790
Query: 70 AQKAVDRLDGRVVDGREITVQFA 92
+A + G GR++ V+++
Sbjct: 791 TARATALVQGTHFYGRKLVVEYS 813
>gi|193787706|dbj|BAG53419.1| unnamed protein product [Homo sapiens]
Length = 199
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
>gi|209879626|ref|XP_002141253.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209556859|gb|EEA06904.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ F T+ + FE+YG V DV++P D T RGF FV Y +A+ AV+
Sbjct: 87 SLLVRNLRFETSPSRVRRHFERYGTVRDVYLPLDYYTRRPRGFGFVEYMDPRDAEDAVNN 146
Query: 77 LDGRVVDGREITVQFA----KYGPNAEKIQQ--GRIVESSSKSK--GRSRSRSPRPRYRD 128
LDG V+DG I V A K KIQ+ R SS S R P YR+
Sbjct: 147 LDGSVLDGSTIRVVVAHDRRKSPETMRKIQKDAARFSRSSGYSSRFDRPGGHPPAIDYRN 206
Query: 129 EHRDKDYRRRSRSRSRERYDRD--RYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEER 185
+R + Y R S R +RY R RY SK R R RS S DR ++ R Y +R
Sbjct: 207 RYRSEPY-RHSSYREDDRYSRSKRRYPSKSAS-RSPYRGRSGSRDRSCSNNRDTYQGKR 263
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|449685942|ref|XP_002169071.2| PREDICTED: serine/arginine-rich splicing factor 10-like [Hydra
magnipapillata]
Length = 171
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ ++DL +FEKYG + DV+IP D T + RGFA+V++ Y D+A+ AVD
Sbjct: 11 SVFVRNVHHDVRSEDLRRIFEKYGDISDVYIPLDYYTREPRGFAYVQFDYEDDAEDAVDG 70
Query: 77 LDGRVVDGREITVQFAKYG 95
LDG + GR+I + A+ G
Sbjct: 71 LDGTTLFGRQIFCKNARGG 89
>gi|198435962|ref|XP_002131898.1| PREDICTED: similar to peptidylprolyl isomerase-like 4 [Ciona
intestinalis]
Length = 522
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 16/186 (8%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD L V + TT +DL +F ++G ++ I RD +TGDS +AFV ++ D
Sbjct: 237 PPD----NVLFVCKLNAVTTDEDLEIIFSRFGTIISCEIIRDYKTGDSLQYAFVEFETPD 292
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRD 128
+KA ++D ++D R I V F++ + K+ R ++ KS ++S R +
Sbjct: 293 MCEKAYQKMDNVLIDDRRIHVDFSQ---SVSKLNFPRF-NATKKSNEEISNKSIRRQKTP 348
Query: 129 EHRDKDYRRRSRSRSRE-RYDRDR----YRSKERDHRRRSRSRSASP---DRHKNHGRGK 180
+ D+ Y+RR R + R++++R R++ DH R R R SP DR +H R +
Sbjct: 349 DSPDQKYKRRHRDVTPPVRHNQNRRDVPPRNRPNDHSLRRRHREESPVSRDRDVSHRRHR 408
Query: 181 YDEERR 186
E+RR
Sbjct: 409 DVEDRR 414
>gi|395545949|ref|XP_003774858.1| PREDICTED: uncharacterized protein LOC100927808 [Sarcophilus
harrisii]
Length = 442
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + V I D+++ SRGFAFV
Sbjct: 279 HLGNRSNPD--PNCCLGVFGLSLYTTERDLRQIFTKYGPISHVSIVYDQQSRRSRGFAFV 336
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +EA+KA +R+DG +DGR I V F+
Sbjct: 337 YFENVEEAKKAKERVDGIELDGRRIRVDFS 366
>gi|168704512|ref|ZP_02736789.1| RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 129
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI+F+TT+DDL F +YG V+ I DR TG SRGFAFV D A++A+ L
Sbjct: 5 LYVGNISFQTTSDDLIQAFSQYGTVLGAQIVADRETGRSRGFAFVEMH--DGAEEAIAAL 62
Query: 78 DGRVVDGREITVQFAK 93
+G + GR +TV AK
Sbjct: 63 NGAQLSGRTLTVNEAK 78
>gi|357478561|ref|XP_003609566.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355510621|gb|AES91763.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 192
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV N+ +DL FE+YG V DV++PR+ TG+ RGF FV+Y++ ++A +A +
Sbjct: 49 GLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAEAKQQ 108
Query: 77 LDGRVVDGREITVQFAK 93
L+ ++ GREI + FA+
Sbjct: 109 LNHTIIGGREIRIVFAE 125
>gi|350407880|ref|XP_003488226.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Bombus
impatiens]
Length = 502
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK++ + RDR+TGDS +AF+ + ++A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDRQTGDSLQYAFIEFADRKSCEEAYFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRR 137
D ++D R I V F S S +K R + + +Y D+ D+
Sbjct: 302 DNVLIDDRRIHVDF-----------------SQSVAKMRWKGKGKGVQYFDDEADEVGNE 344
Query: 138 RSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEE-----RRSRSRSY 192
+ RD RSKE +HR+ R + A+ + ++ R KY E+ +R R S
Sbjct: 345 NLEKVISKHKQRDEPRSKEIEHRKYERIKDANKAKVYSYNRDKYIEKEKYKVQRHRDSSR 404
Query: 193 ERY 195
ERY
Sbjct: 405 ERY 407
>gi|326427558|gb|EGD73128.1| hypothetical protein PTSG_04841 [Salpingoeca sp. ATCC 50818]
Length = 285
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
Y L V N+ + T D+ F K+GKV DVF+P R TG RGF FV + EA+ A
Sbjct: 80 YKLFVGNLNYDTKVSDMEEAFGKFGKVKDVFLPMHRVTGTCRGFGFVTFADRTEAEDAEK 139
Query: 76 RLDGRVVDGREITVQFAK 93
++G GRE+ V FA+
Sbjct: 140 GMNGTTFLGREVAVNFAR 157
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D R T + + + + + D+ +F +YG+ V + + RD+ TG SRGF +++Y+
Sbjct: 28 DYRHTAYVFIGGLPYELSEGDIIAIFSQYGEPVHLHLARDKDTGKSRGFGWLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY----GPNAEKIQQGRIVESSSKSKG 115
AVD L G VV GR I V A+Y G AE+ QG + +S G
Sbjct: 88 NLAVDNLTGAVVLGRTIRVDHAEYKHKEGDGAEEAFQGLKIGKEGRSGG 136
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+ ++L V N+ FR + +L LFEK+G+VV V + D+ +G RGF FV Y A+
Sbjct: 132 KGAFTLFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKD 191
Query: 73 AVDRLDGRVVDGREITVQFA--KYGPN 97
AV L+G +DGREI+V + K+ N
Sbjct: 192 AVSNLNGMPLDGREISVSISEDKFAAN 218
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L V ++F TT + L F KYG + V + RD+ TG SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A++ ++G+ VDGR I V A
Sbjct: 61 DALEGMNGKSVDGRTIRVDEA 81
>gi|449524006|ref|XP_004169014.1| PREDICTED: uncharacterized protein LOC101227075 [Cucumis sativus]
Length = 305
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L FE++G V DV+IP+D TG+ RGFAFV + EA +A
Sbjct: 54 SLLVRNIPMDCRPEELRAPFERFGLVRDVYIPKDYYTGEPRGFAFVEFVDPYEASEAQYH 113
Query: 77 LDGRVVDGREITVQFA 92
++G+ GREITV A
Sbjct: 114 MNGKKFAGREITVVLA 129
>gi|119609850|gb|EAW89444.1| splicing factor, arginine/serine-rich 2, isoform CRA_e [Homo
sapiens]
Length = 78
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 43/56 (76%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR+
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRF 62
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N++F D++F LF+ YG ++ V IP T +GF +V+Y +EAQKA+D+
Sbjct: 313 TLFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKALDK 372
Query: 77 LDGRVVDGREITVQFA 92
L G +D R + + F+
Sbjct: 373 LQGEYIDNRPVRLDFS 388
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V +++ + L FE G V+ + +R T SRG+ +V ++ A+KA+
Sbjct: 212 TIFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDKSYAEKAIKE 271
Query: 77 LDGRVVDGREITVQFAKYGP 96
+ G+ +DGR I V + P
Sbjct: 272 MQGKEIDGRPINVDMSTSKP 291
>gi|242046420|ref|XP_002461081.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|241924458|gb|EER97602.1| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor]
gi|448878346|gb|AGE46136.1| arginine/serine-rich splicing factor SCL25B transcript I [Sorghum
bicolor]
gi|448878348|gb|AGE46137.1| arginine/serine-rich splicing factor SCL25B transcript II [Sorghum
bicolor]
Length = 209
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ D+++PRD TG+ RGF FV+Y D+A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYY 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+VV GR+ITV FA+
Sbjct: 98 MDGQVVLGRQITVVFAE 114
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 14/141 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N++++T+ + + F +G V DV++P D + RGF FV + + ++A++A+++
Sbjct: 11 SLLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAERALEK 70
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYR 136
+DG +DG+ I V AK G +A + + R +GR R SPR R R +D R
Sbjct: 71 MDGFELDGKAIEVAIAKKGRSAPQQMKQR------DERGR-REGSPRGR-----RYEDER 118
Query: 137 RRSRSRSRERYDRDRYRSKER 157
R SR S R R RY S+ER
Sbjct: 119 RYSRMDSPPR--RGRYGSRER 137
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDAFHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++FRTT + L F+ +G++VDV + D+ RGFAF+RY+ +EAQKA++ +
Sbjct: 92 LYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIEGM 151
Query: 78 DGRVVDGREITVQFAK 93
G+ +DGR I V+ AK
Sbjct: 152 HGKFLDGRVIFVEVAK 167
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++FRTT + L F+ +G++VDV + D+ RGFAF+RY +E+QKA++ +
Sbjct: 96 LYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKAIEGM 155
Query: 78 DGRVVDGREITVQFAK 93
G+ +DGR I V+ AK
Sbjct: 156 HGKFLDGRVIFVEVAK 171
>gi|256089346|ref|XP_002580772.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
gi|353230889|emb|CCD77306.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 414
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 1 MSHFG--KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRG 58
SHFG KS D ++ S+ + NI T A +F LF ++G +++V IP+D +T SR
Sbjct: 242 FSHFGRPKSTKIDKNESTSVYIYNIGNMTEAQ-IFVLFSQFGPILNVSIPKDYKTNSSRN 300
Query: 59 FAFVRYKYADEAQKAVDRLDGRVVDGREITVQF 91
F FV Y AQ ++D ++G ++ GR + V F
Sbjct: 301 FGFVTYSNFQSAQNSIDIMNGSLLSGRRLQVSF 333
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 19 LVLN-ITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++N I T DL LF G + I RDR +G S GF F Y+ +D A KA+ R
Sbjct: 9 LIINYIPTSITDADLTNLFSSVGAIKTCRIIRDRNSGSSFGFGFCEYEDSDSAHKAISRF 68
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS 111
+G + + + V AK QGR+ +SS+
Sbjct: 69 NGYRIADKILKVSLAKL--------QGRLCQSSN 94
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N T DL F ++G VV I RD T S+G A+V ++ +A+ A
Sbjct: 94 NLYVKNFPPTLTEHDLTAEFGQFGPVVQCRILRDHDTNVSKGSAYVLFENPADAEAAKRS 153
Query: 77 LDGRV----VDGREITVQFA 92
LD R D + ++++FA
Sbjct: 154 LDARAWPGSTDNQMLSIKFA 173
>gi|384488552|gb|EIE80732.1| hypothetical protein RO3G_05437 [Rhizopus delemar RA 99-880]
Length = 238
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + +T RT DL +F KYGKV+ I D T +SRGF F+R A++A++A++
Sbjct: 62 NLFITGLTIRTNGADLEDIFGKYGKVIKAEIMYDPHTRESRGFGFIRMANAEDAERALNG 121
Query: 77 LDGRVVDGREITVQFAK 93
+ G +DGR +TV+ AK
Sbjct: 122 VSGTEIDGRVVTVEKAK 138
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL FE++G V DV++P+D TG+ RGFAFV++ EA +A
Sbjct: 118 SLLVRNIPLNCRPEDLRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYH 177
Query: 77 LDGRVVDGREITVQFA 92
++G++ GREI+V A
Sbjct: 178 MNGQIFAGREISVVVA 193
>gi|193785174|dbj|BAG54327.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 7 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 61
>gi|83286039|ref|XP_729987.1| dentin phosphoryn [Plasmodium yoelii yoelii 17XNL]
gi|23489341|gb|EAA21552.1| dentin phosphoryn [Plasmodium yoelii yoelii]
Length = 793
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ + SLL+ N++F T+ D + +FE +GK+ DV++P D T RGF FV Y A+
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAK 61
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
+A++ L+ +DG+EI + A+
Sbjct: 62 EALNILNNSKIDGKEIRIIVAQ 83
>gi|297722159|ref|NP_001173443.1| Os03g0374575 [Oryza sativa Japonica Group]
gi|255674538|dbj|BAH92171.1| Os03g0374575 [Oryza sativa Japonica Group]
Length = 251
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G+V D+++PRD TG+ RGF F++Y ++A A
Sbjct: 45 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGEPRGFGFIQYYDPEDAADAKYH 104
Query: 77 LDGRVVDGREITVQFAK 93
+DG+++ GRE+TV FA+
Sbjct: 105 MDGQILLGREVTVVFAE 121
>gi|448878334|gb|AGE46130.1| arginine/serine-rich splicing factor SCL28 transcript I [Sorghum
bicolor]
Length = 241
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ NI+ +D+ FE++G + DV++PR+ T + RGF FV+++Y ++A A +
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ +A+
Sbjct: 119 NHQVIGGREISIVYAE 134
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|70942643|ref|XP_741463.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519859|emb|CAH77253.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 254
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ + SLL+ N++F T+ D + +FE +GK+ DV++P D T RGF FV Y A+
Sbjct: 2 VENGCSLLIRNLSFETSPDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAK 61
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
+A++ L+ +DG+EI + A+
Sbjct: 62 EALNILNNSKIDGKEIRIIVAQ 83
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + ++F T + L F KYG + V + RD+ TG SRGF FV+Y +D+A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYGP 96
A++ ++G+ +DGR I V A G
Sbjct: 61 DALEGMNGKTLDGRAIRVDEAGKGG 85
>gi|357162700|ref|XP_003579494.1| PREDICTED: uncharacterized protein LOC100845138 [Brachypodium
distachyon]
Length = 929
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S P + D SL V N++ T ++L F +GK++D +PRD TG ++G+ FVRY
Sbjct: 299 SQPSEEIDMSSLYVRNLSLSMTKEELLQHFLPFGKIIDAKVPRDYATGLNKGYGFVRYSN 358
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
+ EA A+ L+G +V+G+++ V+ + P
Sbjct: 359 SHEAANAIIHLNGHLVEGKKMEVRVSGVSP 388
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V N+ + L LF +G++V + + TG S+G+ FV+Y A A
Sbjct: 202 DNTNLYVGNLPASVGSHKLIELFLPFGRIVRSKVADECFTGLSKGYGFVKYDDPHSATAA 261
Query: 74 VDRLDGRVVDGREITVQFAKYGPNA 98
++R++GR+VDG+ + V+ A P+
Sbjct: 262 INRMNGRLVDGKILEVRVAGVPPSG 286
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D +L V ++ T + L +F G++ + DR TG S+GF FVR+ A A
Sbjct: 703 DMANLYVCHLPLYITTEKLIEIFLPCGQITQARVVTDRYTGISKGFGFVRFADTYSAAVA 762
Query: 74 VDRLDGRVVDGREITVQFAKYGPN 97
+ ++G ++G + V+ A P+
Sbjct: 763 LTHMNGYPLEGHILEVRIAGVHPS 786
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRG-FAFVRYKYADEAQK 72
D +L V NI L +F +GK+ + + T +G + FV++ + A +
Sbjct: 408 DMANLYVCNIPTSIDTKKLIEIFLPFGKITHARVAAHQGTYSGKGRYGFVKFADSQCAAE 467
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNA 98
A+ +DG +V+G + V+ A +A
Sbjct: 468 AITLMDGALVEGETLVVRVAGLSSSA 493
>gi|363543465|ref|NP_001241742.1| SR repressor protein [Zea mays]
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ SLLV NI R ++L FE++G V D ++PRD TG+ RGF FV + A +A +A
Sbjct: 37 SVSLLVRNIPLRCRPEELRVPFERFGPVRDFYLPRDYHTGEPRGFGFVEFVDAYDASEAQ 96
Query: 75 DRLDGRVVDGREITVQFA 92
++ ++ GREITV A
Sbjct: 97 YHMNRQMFAGREITVVLA 114
>gi|389583810|dbj|GAB66544.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1084
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ + SLL+ N++F T+ + + +F+ +GK+ DV++P D T RGF FV Y + A+
Sbjct: 2 VENGCSLLIKNLSFHTSPEKIRKIFQSFGKIRDVYLPLDHYTRRPRGFGFVEYYEPEYAK 61
Query: 72 KAVDRLDGRVVDGREITVQFAKY---GPNAEKIQQ 103
+A+ L+ +DG+EI + A+ P KI Q
Sbjct: 62 EAMSILNHSKIDGKEIKIIIAQNRRKSPETMKIYQ 96
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + ++F T + L F KYG + V + RD+ TG SRGF FV+Y D+A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYGP 96
A++ ++G+ +DGR I V A G
Sbjct: 61 DALEGMNGKTLDGRAIRVDEAGKGG 85
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ SLLV NI ++L +FE++G V DV+IP+D TG+ RGF FV++ +A +
Sbjct: 41 QDSGSLLVRNIPRDCRPEELRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVEPSDAME 100
Query: 73 AVDRLDGRVVDGREITVQFA 92
A ++G+V GR++ V A
Sbjct: 101 AQHHMNGQVFAGRQMFVVVA 120
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + ++F T + L F KYG + V + RDR T SRGF FV+Y A++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYGP 96
A+D ++G+ +DGR I V A G
Sbjct: 61 DAMDGMNGQTLDGRTIRVDEAGKGG 85
>gi|357160417|ref|XP_003578758.1| PREDICTED: uncharacterized protein LOC100826288 [Brachypodium
distachyon]
Length = 295
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV++P+D +G+ RGFAFV + +A +A
Sbjct: 66 SLLVRNIPLSARAEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYH 125
Query: 77 LDGRVVDGREITVQFA 92
++ +V GREITV A
Sbjct: 126 MNRQVFFGREITVVLA 141
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++P+D TG+ RGF FV+Y +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYH 101
Query: 77 LDGRVVDGREITVQFAK 93
+DG+V+ GRE+TV FA+
Sbjct: 102 MDGQVLLGRELTVVFAE 118
>gi|224139940|ref|XP_002323350.1| predicted protein [Populus trichocarpa]
gi|222867980|gb|EEF05111.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + DV++PRD TG+ RGF FV+Y +A A
Sbjct: 39 SLLVRNLRLDCRPEDLRGPFGRFGPLKDVYLPRDYYTGEPRGFGFVQYLEPADAADAKHH 98
Query: 77 LDGRVVDGREITVQFAK 93
+DG ++ GRE+TV FA+
Sbjct: 99 MDGEILFGRELTVVFAE 115
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|417404448|gb|JAA48976.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily
[Desmodus rotundus]
Length = 763
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F +YG V++V IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQYGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKSM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR I V +A
Sbjct: 175 NMKEIKGRTIAVDWA 189
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P D+ + ++ + N++F + +DL L +++G + V I T S+G AF ++
Sbjct: 332 PSDVNEGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQG 391
Query: 69 EAQKAVDRLD------GRVVDGREITVQFA 92
AQK + G +DGR++ V A
Sbjct: 392 AAQKCLAAASPETEGGGLKLDGRQLKVDLA 421
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
Length = 182
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|367017792|ref|XP_003683394.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
gi|359751058|emb|CCE94183.1| hypothetical protein TDEL_0H03240 [Torulaspora delbrueckii]
Length = 167
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ + + T D+ +F +YG VDVF+ RDR TGDS+GF +++Y+ A A+D L
Sbjct: 36 IFIGGLNVELTEADILTIFSQYGIPVDVFLVRDRETGDSKGFGYLKYEDQRSAVLAIDNL 95
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQ 102
+G + GR I V A Y P + I+
Sbjct: 96 NGSKIAGRIIKVDHAWYTPRDDMIE 120
>gi|159463786|ref|XP_001690123.1| predicted protein [Chlamydomonas reinhardtii]
gi|158284111|gb|EDP09861.1| predicted protein [Chlamydomonas reinhardtii]
Length = 118
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL N++ TT +DL E+YG + D+++P+D +TG+ RG FV + +A++A
Sbjct: 31 SLLFRNLSKTTTTEDLRHYAERYGPIRDIYLPKDFQTGEPRGLGFVEFSDPKDAEEARHC 90
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG V GR I+V FA++G
Sbjct: 91 MDGSTVAGRVISVTFAQHG 109
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + ++F T D L F KYG + V + RD+ TG SRGF FV+Y ++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+D ++G+ +DGR I V
Sbjct: 61 DALDAMNGKTLDGRAIRV 78
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ A L + +YG+VVD I DR TG RGF F+ Y DEA +A+ L
Sbjct: 44 LFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGFGFITYSNVDEASRALQAL 103
Query: 78 DGRVVDGREITVQFA 92
DG+ +DGR + V+FA
Sbjct: 104 DGQDLDGRRVEVKFA 118
>gi|108708313|gb|ABF96108.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 238
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI+ +D+ FE++G V DV++PR+ T + RGF FV+++Y ++A A L
Sbjct: 63 LLVRNISLTARPEDIRIPFEQFGPVKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEL 122
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ FA+
Sbjct: 123 NHQVIGGREISIVFAE 138
>gi|222637522|gb|EEE67654.1| hypothetical protein OsJ_25252 [Oryza sativa Japonica Group]
Length = 388
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ D++IPRD +G+ RGF FV+Y D+A A
Sbjct: 214 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYIPRDYYSGEPRGFGFVQYYDPDDAADAKYY 273
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRS----RSRSPR 123
+DG+V+ GRE+ V FA+ N +K + R + S S+GRS SRSPR
Sbjct: 274 MDGQVILGREVAVVFAEE--NRKKPSEMRSRDRISGSRGRSYDQRYSRSPR 322
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N+ F+ T DL F +GK+VDV IP+++ TG+ RGF FV + +EA A++++
Sbjct: 287 LIIRNLPFQATEADLSEKFAAHGKLVDVIIPKNKETGNPRGFGFVEFFTKEEAANALEKV 346
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +
Sbjct: 347 NAQPIRGRRVAVDWC 361
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
P ++ +L + N+ F T DL F ++G++ + +D+ TG +RG AF+++
Sbjct: 484 APAEVEAGTTLFIRNLPFGATVQDLRAKFAEFGRIRYCALVKDKVTGMARGSAFLQF 540
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T DL F +YG VVDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKGKEGRNV 104
>gi|357492235|ref|XP_003616406.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
gi|355517741|gb|AES99364.1| Splicing factor, arginine/serine-rich 13A [Medicago truncatula]
Length = 286
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L FE++G V DV+IP+D +G RGFAFV++ A EA +A
Sbjct: 48 SLLVRNIPLDCRPEELRAPFERFGPVRDVYIPKDYYSGQPRGFAFVQFVDAYEASEAQYH 107
Query: 77 LDGRVVDGREITVQFA 92
+D ++ GREI+V A
Sbjct: 108 MDRQIFAGREISVVVA 123
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|221056270|ref|XP_002259273.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193809344|emb|CAQ40046.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 946
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ + SLL+ N++F T+ D + +F+ +GKV DV++P D T RGF FV Y A+
Sbjct: 2 VENGCSLLIKNLSFHTSPDKIRKIFQSFGKVRDVYLPLDHYTRRPRGFGFVEYYEPQYAK 61
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
+A+ L+ +DG E+ + A+
Sbjct: 62 EALITLNHTKIDGNEVKIIIAQ 83
>gi|388511713|gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 2 SHFGKSGPPDIRD----TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSR 57
S F +GPP R + +L V + RTT + L F K+G+VV + DR +G S+
Sbjct: 26 SPFTLTGPPTTRQMGEPSTNLFVSGLNKRTTTEKLREEFAKFGEVVHARVVTDRVSGYSK 85
Query: 58 GFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
GF FV+Y +EA K + +DG+ +DG I ++AK P
Sbjct: 86 GFGFVKYATIEEASKGIQGMDGKFLDGWVIFAEYAKSSP 124
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|116793427|gb|ABK26743.1| unknown [Picea sitchensis]
Length = 252
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV NI+ +DL FE++G V DV++P++ T + RGF FV+Y+ D+A +A
Sbjct: 56 GLLVRNISLDARPEDLRIPFERFGPVKDVYLPKNFYTREPRGFGFVKYRNHDDAAEAKRH 115
Query: 77 LDGRVVDGREITVQFAK 93
++ +V+ GREI++ FA+
Sbjct: 116 MNHQVIGGREISIVFAE 132
>gi|356551855|ref|XP_003544288.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 354
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V I F T DL +F +YG+VVDV + RD+ TG S+GFAF+ Y+
Sbjct: 33 KDSAYVFVGGIPFDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNL 92
Query: 73 AVDRLDGRVVDGREITV 89
AVD L+G V GR I V
Sbjct: 93 AVDNLNGAQVLGRIIRV 109
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+
Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHN 70
Query: 77 LDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 71 LDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|324520554|gb|ADY47664.1| Serine/arginine-rich splicing factor 12 [Ascaris suum]
Length = 183
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + +DL LFE+ G V DV+IP D T +SRGFA+V+Y+Y +A++A +
Sbjct: 15 TLYVRQVHYAARPEDLRTLFERMGPVRDVYIPLDYYTHESRGFAYVKYEYVGDAERAYKQ 74
Query: 77 LDGRVVDGREITVQFAK 93
L G + GR I + +A+
Sbjct: 75 LHGCAILGRRIAIDWAQ 91
>gi|336257891|ref|XP_003343767.1| hypothetical protein SMAC_04425 [Sordaria macrospora k-hell]
gi|380091605|emb|CCC10737.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 344
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ LFEKYG+V I +D TG+SRGF FV+ ++AQ A D
Sbjct: 75 NLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMVTPEQAQAAKDG 134
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 135 LQGEVIEGRTLSIEMAR 151
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DDL +F +YG V V +P DR TG RGF FV +E QKA++
Sbjct: 2 SIYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR+I V AK
Sbjct: 62 LDGAEWMGRDIKVNKAK 78
>gi|384247695|gb|EIE21181.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 184
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
D SLLV N++ T DDL + EKYG++ DV+IP+D +G+ RG F+ + +A+ A
Sbjct: 12 DGCSLLVRNLSRSVTLDDLRYVAEKYGRLRDVYIPKDYYSGEPRGIGFLEFTDPRDAEDA 71
Query: 74 VDRLDGRVVDGREITVQFAKYG 95
+ LD +V+ G+E++V A G
Sbjct: 72 IYGLDRKVIQGKEVSVVLALQG 93
>gi|340373951|ref|XP_003385503.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Amphimedon queenslandica]
Length = 444
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 42/197 (21%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T+++DL +F ++G ++ + RD++TGDS +AF+ ++ D+ KA ++
Sbjct: 242 LFVCKLNPATSSEDLEIIFSRFGPILSCEVIRDQKTGDSLQYAFIEFETEDDCIKAYFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKS------------------------ 113
D ++D R I V F++ + K + + + S
Sbjct: 302 DNVLIDDRRIHVDFSQ---SLAKTKHNKPIPSQPSPVDDKYEMVFDDKDLIPEKRKGKQD 358
Query: 114 ---KGRSRSRSPRPR--YRDEHRDK--------DYRRRSRSRSRERYDRDRYRSKERDH- 159
K R S SPRPR YRD + D R + R +Y R R KERDH
Sbjct: 359 RDYKNREGSSSPRPRRGYRDTRKTSRSPRRRKFDSSHRKNEKERRKYSRSP-RRKERDHG 417
Query: 160 RRRSRSRSASPDRHKNH 176
+ R RS S SP R K+H
Sbjct: 418 KERGRSSSKSPKRTKSH 434
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
gi|195637558|gb|ACG38247.1| SR repressor protein [Zea mays]
Length = 258
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV+IP+D +G+ RGFAFV + +A +A
Sbjct: 39 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYH 98
Query: 77 LDGRVVDGREITVQFA 92
++ +V GREI V A
Sbjct: 99 MNRQVFFGREIAVVLA 114
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T DL +F +YG V V IP DR TG RGFAFV + A E A++
Sbjct: 2 SIFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRETGRMRGFAFVEMETAAEETSAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V AK
Sbjct: 62 LDGAEWYGREMKVNQAK 78
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ ++ F T + FE++G + DV++P D R+ RGF FV Y ++A+ A+++
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRS 119
+DG +DG I V FA+ G + + + R ES + GR S
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHREYESFHGNGGRHLS 116
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ ++ F T + FE++G + DV++P D R+ RGF FV Y ++A+ A+++
Sbjct: 14 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 73
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRS 119
+DG +DG I V FA+ G + + + R ES + GR S
Sbjct: 74 MDGATLDGVTINVTFAQEGRKSPESMRHREYESFHGNGGRHLS 116
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
V N+++ TT D L F ++G+++D + RDR TG SRGF FV + A+EAQ A+ L+
Sbjct: 7 VGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITSLNE 66
Query: 80 RVVDGREITVQFAK 93
+ +DGR I V A
Sbjct: 67 QELDGRRIRVNLAN 80
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 167
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 10 PDIRDTYSLL----VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
PD R + S L + N+++ T D L F ++G+V+D + +DR +G SRGF FV +
Sbjct: 3 PDARSSRSALEYAHIGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFG 62
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAKYGP 96
+ EAQ A+D L+ + +DGR I V A P
Sbjct: 63 TSQEAQAAIDGLNEQDLDGRRIRVNLANARP 93
>gi|427783563|gb|JAA57233.1| Putative splicing factor sc35 [Rhipicephalus pulchellus]
Length = 214
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ F+ T +DL +FEKYGKV V + +D++T S+G AFV + + A K
Sbjct: 11 TVYVSNLPFKLTNNDLHQIFEKYGKVAKVTVMKDKQTWKSKGVAFVLFMDPESASKCASA 70
Query: 77 LDGRVVDGREITVQFAKY 94
L+ +++ GR + AKY
Sbjct: 71 LNNQLLMGRTLRASIAKY 88
>gi|357462657|ref|XP_003601610.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355490658|gb|AES71861.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|388503978|gb|AFK40055.1| unknown [Medicago truncatula]
Length = 248
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F +G + D+++P+D TG RGF F+++ +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGHFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYH 101
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS 111
+DG+V+ GREITV FA+ N +K + R+ E SS
Sbjct: 102 MDGQVLLGREITVVFAEE--NRKKPTEMRVRERSS 134
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N+ +D+ F+K+G V DV++P+D TG+ RGFAFV + ++ +A KA
Sbjct: 398 SLFVSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARYH 457
Query: 77 LDGRVVDGREITVQFA 92
++ +++ GREI+V FA
Sbjct: 458 MNRKMLSGREISVAFA 473
>gi|115456325|ref|NP_001051763.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|122246709|sp|Q10B98.1|C3H25_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=OsC3H25
gi|15042832|gb|AAK82455.1|AC091247_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|18855068|gb|AAL79760.1|AC096687_24 putative small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
gi|108711850|gb|ABF99645.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550234|dbj|BAF13677.1| Os03g0826400 [Oryza sativa Japonica Group]
gi|125588469|gb|EAZ29133.1| hypothetical protein OsJ_13196 [Oryza sativa Japonica Group]
Length = 312
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 11/191 (5%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+D+ + V I + T DL +F +YG+VVDV + RD+ TG S+GFAF+ Y+
Sbjct: 32 FKDSAYVFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTI 91
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAEKIQ--------QGRIVESSSKSKGRSRSRSPR 123
AVD L+G V GR + V E+ + R V + + +R S R
Sbjct: 92 LAVDNLNGAKVLGRIVRVDHVSKYKKKEEEDEEELQKKREARGVCYAFQKGECNRGASCR 151
Query: 124 PRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSAS--PDRHKNHGRGKY 181
+ DE R+ + S+ S+ R++ DR+ H++ S PDR K +
Sbjct: 152 YSH-DEQRNANTGWGSKEESKARWEHDRHHEPPMSHKKFPSSAGEQRFPDRAKEENKSTG 210
Query: 182 DEERRSRSRSY 192
E + SRS +Y
Sbjct: 211 REGQSSRSEAY 221
>gi|260814928|ref|XP_002602165.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
gi|229287472|gb|EEN58177.1| hypothetical protein BRAFLDRAFT_268357 [Branchiostoma floridae]
Length = 224
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ F T +DL +FEKYGKVV V + RD+ T S+G AFV + +EA V
Sbjct: 11 TVYVSNLPFALTNNDLHKIFEKYGKVVKVTVMRDKITRQSKGVAFVLFLKREEAHACVRA 70
Query: 77 LDGRVVDGREITVQFAK 93
L+G+V+ GR + AK
Sbjct: 71 LNGKVLFGRTVKCSMAK 87
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
V N+++ TT D L F YG+++D + RDR TG SRGF FV + + EAQ A+ L+
Sbjct: 7 VGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAISSLNE 66
Query: 80 RVVDGREITVQFAK 93
+ +DGR I V A
Sbjct: 67 QELDGRRIKVNLAN 80
>gi|297819328|ref|XP_002877547.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
gi|297323385|gb|EFH53806.1| hypothetical protein ARALYDRAFT_905943 [Arabidopsis lyrata subsp.
lyrata]
Length = 316
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V I F T DL +F +YG++VDV + RD+ TG S+GFAF+ Y+ AVD L
Sbjct: 38 VYVGCIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTVLAVDNL 97
Query: 78 DGRVVDGREITVQFAK 93
+G +V GR I V +
Sbjct: 98 NGALVLGRTIKVDHCR 113
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
gi|448878224|gb|AGE46075.1| arginine/serine-rich splicing factor SCL30 transcript I [Zea mays]
Length = 258
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV+IP+D +G+ RGFAFV + +A +A
Sbjct: 39 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYH 98
Query: 77 LDGRVVDGREITVQFA 92
++ +V GREI V A
Sbjct: 99 MNRQVFFGREIAVVLA 114
>gi|448878226|gb|AGE46076.1| arginine/serine-rich splicing factor SCL30 transcript II [Zea mays]
Length = 259
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A+DL FE++G V DV+IP+D +G+ RGFAFV + +A +A
Sbjct: 39 SLLVRNIPLSVRAEDLRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYH 98
Query: 77 LDGRVVDGREITVQFA 92
++ +V GREI V A
Sbjct: 99 MNRQVFFGREIAVVLA 114
>gi|327267358|ref|XP_003218469.1| PREDICTED: transformer-2 protein homolog beta-like [Anolis
carolinensis]
Length = 297
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V I+F+T + L F+KYG VV+ I DR TG SRGF FV Y ++EA A+ L
Sbjct: 42 LFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQAL 101
Query: 78 DGRVVDGREITVQFA 92
DG+ + GR + V +A
Sbjct: 102 DGQDLHGRRVRVNYA 116
>gi|355725838|gb|AES08680.1| transformer 2 beta-like protein [Mustela putorius furo]
Length = 297
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 165 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 222
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 223 YFENVDDAKEAKERANGMELDGRRIRVDFS 252
>gi|301759721|ref|XP_002915754.1| PREDICTED: hypothetical protein LOC100477296 [Ailuropoda
melanoleuca]
Length = 440
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 259 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 316
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 317 YFENVDDAKEAKERANGMELDGRRIRVDFS 346
>gi|189055016|dbj|BAG38000.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|77556878|gb|ABA99674.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649598|dbj|BAF30110.1| Os12g0572400 [Oryza sativa Japonica Group]
gi|215694562|dbj|BAG89555.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617335|gb|EEE53467.1| hypothetical protein OsJ_36595 [Oryza sativa Japonica Group]
Length = 263
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL FE++G V DV++P+D +G+ RGFAFV + +A +A
Sbjct: 38 SLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYH 97
Query: 77 LDGRVVDGREITVQFA 92
++ +V GREITV A
Sbjct: 98 MNRQVFFGREITVVLA 113
>gi|41055454|ref|NP_956710.1| transformer-2 protein homolog alpha [Danio rerio]
gi|32451924|gb|AAH54632.1| Transformer-2 alpha [Danio rerio]
Length = 297
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT DL +F +YG + V + D+RTG SRGFAFV +++ D+A++A++R
Sbjct: 136 CLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMER 195
Query: 77 LDGRVVDGREITVQFA 92
+G +DGR I V ++
Sbjct: 196 ANGMELDGRRIRVDYS 211
>gi|148703339|gb|EDL35286.1| mCG1657 [Mus musculus]
Length = 288
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|351709599|gb|EHB12518.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 290
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|395536427|ref|XP_003770219.1| PREDICTED: transformer-2 protein homolog beta-like [Sarcophilus
harrisii]
Length = 288
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ ++ F T + FE++G + DV++P D R+ RGF FV Y ++A+ A+++
Sbjct: 28 SLLIRSLRFDTPTSLVRREFERFGAIRDVYLPLDYRSRRPRGFGFVEYVEEEDARAALEK 87
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRS 119
+DG +DG I V FA+ G + + + R ES + GR S
Sbjct: 88 MDGATLDGVTINVTFAQEGRKSPESMRHREYESFHGNGGRHLS 130
>gi|4759098|ref|NP_004584.1| transformer-2 protein homolog beta isoform 1 [Homo sapiens]
gi|6677975|ref|NP_033212.1| transformer-2 protein homolog beta [Mus musculus]
gi|16923966|ref|NP_476460.1| transformer-2 protein homolog beta [Rattus norvegicus]
gi|77736495|ref|NP_001029948.1| transformer-2 protein homolog beta [Bos taurus]
gi|116175275|ref|NP_001070689.1| transformer-2 protein homolog beta [Sus scrofa]
gi|386780576|ref|NP_001248265.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|114590871|ref|XP_530672.2| PREDICTED: transformer-2 protein homolog beta isoform 3 [Pan
troglodytes]
gi|194222668|ref|XP_001497871.2| PREDICTED: transformer-2 protein homolog beta-like isoform 1 [Equus
caballus]
gi|296224784|ref|XP_002758193.1| PREDICTED: transformer-2 protein homolog beta [Callithrix jacchus]
gi|332215039|ref|XP_003256645.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Nomascus
leucogenys]
gi|345796409|ref|XP_535833.3| PREDICTED: transformer-2 protein homolog beta [Canis lupus
familiaris]
gi|354484188|ref|XP_003504272.1| PREDICTED: transformer-2 protein homolog beta-like [Cricetulus
griseus]
gi|395839823|ref|XP_003792775.1| PREDICTED: transformer-2 protein homolog beta [Otolemur garnettii]
gi|397470084|ref|XP_003806663.1| PREDICTED: transformer-2 protein homolog beta [Pan paniscus]
gi|402860695|ref|XP_003894758.1| PREDICTED: transformer-2 protein homolog beta [Papio anubis]
gi|403270092|ref|XP_003927029.1| PREDICTED: transformer-2 protein homolog beta-like [Saimiri
boliviensis boliviensis]
gi|410970819|ref|XP_003991874.1| PREDICTED: transformer-2 protein homolog beta [Felis catus]
gi|426217758|ref|XP_004003119.1| PREDICTED: transformer-2 protein homolog beta [Ovis aries]
gi|426343199|ref|XP_004038202.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Gorilla
gorilla gorilla]
gi|51703329|sp|P62997.1|TRA2B_RAT RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=RA301; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703330|sp|P62995.1|TRA2B_HUMAN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; Short=hTRA2-beta; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703331|sp|P62996.1|TRA2B_MOUSE RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Silica-induced gene 41
protein; Short=SIG-41; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|122143022|sp|Q3ZBT6.1|TRA2B_BOVIN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|1255683|dbj|BAA08556.1| RNA binding protein (transformer-2-like) [Rattus norvegicus]
gi|1279558|emb|CAA56518.1| SIG41 [Mus musculus]
gi|1418286|gb|AAC28242.1| htra2-beta [Homo sapiens]
gi|1553035|gb|AAB08701.1| transformer-2 beta [Homo sapiens]
gi|4377848|gb|AAD19277.1| transformer-2-beta isoform 1 [Homo sapiens]
gi|12652815|gb|AAH00160.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|12653363|gb|AAH00451.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|13543480|gb|AAH05898.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|26340312|dbj|BAC33819.1| unnamed protein product [Mus musculus]
gi|38174351|gb|AAH61177.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Mus musculus]
gi|47477836|gb|AAH70948.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|73586673|gb|AAI03114.1| Transformer 2 beta homolog (Drosophila) [Bos taurus]
gi|115371737|gb|ABI96193.1| TRA2B [Sus scrofa]
gi|119598612|gb|EAW78206.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_b [Homo sapiens]
gi|123980068|gb|ABM81863.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|148665208|gb|EDK97624.1| mCG127344, isoform CRA_a [Mus musculus]
gi|149019900|gb|EDL78048.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|157928074|gb|ABW03333.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|296491312|tpg|DAA33375.1| TPA: transformer-2 protein homolog beta [Bos taurus]
gi|307685141|dbj|BAJ20501.1| transformer 2 beta homolog [synthetic construct]
gi|344239811|gb|EGV95914.1| Transformer-2 protein-like beta [Cricetulus griseus]
gi|380815584|gb|AFE79666.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|383420761|gb|AFH33594.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|410211132|gb|JAA02785.1| transformer 2 beta homolog [Pan troglodytes]
gi|410264594|gb|JAA20263.1| transformer 2 beta homolog [Pan troglodytes]
gi|410302962|gb|JAA30081.1| transformer 2 beta homolog [Pan troglodytes]
Length = 288
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI+ + +DL F +YG +VDV+IP D T RGFA+++++
Sbjct: 7 PPNT----SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ LD + V GR+I +QFA+
Sbjct: 63 DAEDALHSLDRKWVCGRQIEIQFAQ 87
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++P+D TG+ RGF FV++ +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYH 101
Query: 77 LDGRVVDGREITVQFAK 93
+DG+V+ GRE+TV FA+
Sbjct: 102 MDGQVLLGRELTVVFAE 118
>gi|148665209|gb|EDK97625.1| mCG127344, isoform CRA_b [Mus musculus]
gi|417409256|gb|JAA51145.1| Putative ataxin 2-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 276
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 95 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 152
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 153 YFENVDDAKEAKERANGMELDGRRIRVDFS 182
>gi|51476162|emb|CAH18071.1| hypothetical protein [Homo sapiens]
Length = 276
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 95 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 152
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 153 YFENVDDAKEAKERANGMELDGRRIRVDFS 182
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica Group]
Length = 263
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL FE++G V DV++P+D +G+ RGFAFV + +A +A
Sbjct: 38 SLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYH 97
Query: 77 LDGRVVDGREITVQFA 92
++ +V GREITV A
Sbjct: 98 MNRQVFFGREITVVLA 113
>gi|213402769|ref|XP_002172157.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
gi|212000204|gb|EEB05864.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 213
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++L+ NIT T + + +F YG + D+ P R++ + +G+ +V Y YAD+A+ AVDR
Sbjct: 60 TILIENITRNVTKEHINEIFGAYGTIDDIDFPLFRKSHEPKGYCYVTYAYADQAETAVDR 119
Query: 77 LDGRVVDGREITV----QFAKYG 95
++ ++DG E+ V Q KYG
Sbjct: 120 MNSGMLDGEELFVSLQEQPQKYG 142
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 59/104 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+LV N+ + + D+ FEK+G++ +V +P D+ +G ++GFAFV Y +A KA + +
Sbjct: 215 ILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEM 274
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRS 121
DG+V+ GR I V +AK P A+ ++ K + R+
Sbjct: 275 DGQVIKGRIIHVNYAKADPYAQTTEEKEAKTYKDKKANELKKRA 318
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 2 SHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF 61
+H + D+ + LLV N+ F T +++ LF YG + V +P+ + G +G+AF
Sbjct: 590 THAKRKKAEDVTASTKLLVKNLPFETNLNEVRELFRVYGTLRGVRVPK-KIDGQLKGYAF 648
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+ Y EA A + + GR + ++FAK
Sbjct: 649 IEYATKQEAANAKAAMANSHLYGRHLVIEFAK 680
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T++L + N+ +TT D L +F +YG++ V I ++ T F F+ + A A+
Sbjct: 506 THTLYIKNVNPKTTEDTLRKVFTQYGQIHSVSISKN-PTSSKNVFCFLEFARHSSALNAM 564
Query: 75 DRLDGRVVDGREITVQFA 92
G++VDG I ++ +
Sbjct: 565 KNAQGQLVDGNAIAIELS 582
>gi|355559800|gb|EHH16528.1| hypothetical protein EGK_11817, partial [Macaca mulatta]
gi|355746830|gb|EHH51444.1| hypothetical protein EGM_10813, partial [Macaca fascicularis]
Length = 288
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|90078208|dbj|BAE88784.1| unnamed protein product [Macaca fascicularis]
Length = 288
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|189465920|ref|ZP_03014705.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
gi|189434184|gb|EDV03169.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
Length = 128
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ T +D L LF +YG+V +I DR TG SRGF FV +E QKA+D
Sbjct: 2 NIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAIDT 61
Query: 77 LDGRVVDGREITVQFAK 93
L+ +G+ I V A+
Sbjct: 62 LNETEFEGKNIAVSVAR 78
>gi|224031575|gb|ACN34863.1| unknown [Zea mays]
Length = 240
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ NI+ +D+ FE++G + DV++PR+ T + RGF FV+++Y ++A A +
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 78 DGRVVDGREITVQFAK 93
+V+ GREI++ +A+
Sbjct: 119 HHQVIGGREISIVYAE 134
>gi|388503430|gb|AFK39781.1| unknown [Medicago truncatula]
Length = 336
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LLV N+ +DL FE+YG V DV++PR+ TG+ RGF FV+Y++ ++A A +
Sbjct: 49 GLLVRNLPLDARPEDLRGPFERYGPVKDVYLPRNYYTGEPRGFGFVKYRHGEDAAGAKQQ 108
Query: 77 LDGRVVDGREITVQFAK 93
L+ ++ GREI + FA+
Sbjct: 109 LNHTIIGGREIRIVFAE 125
>gi|335775542|gb|AEH58607.1| transformer-2 protein-like protein beta-like protein [Equus
caballus]
Length = 275
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 94 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 151
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 152 YFENVDDAKEAKERANGMELDGRRIRVDFS 181
>gi|356498939|ref|XP_003518303.1| PREDICTED: zinc finger CCCH domain-containing protein 42-like
[Glycine max]
Length = 235
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V I F T DL +F +YG+VVDV + RD+ TG S+GFAF+ Y+
Sbjct: 33 KDSAYVFVGGIPFDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTNL 92
Query: 73 AVDRLDGRVVDGREITV 89
AVD L+G V GR I V
Sbjct: 93 AVDNLNGAQVLGRIIRV 109
>gi|119598613|gb|EAW78207.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_c [Homo sapiens]
Length = 289
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|323452816|gb|EGB08689.1| hypothetical protein AURANDRAFT_9000, partial [Aureococcus
anophagefferens]
Length = 90
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F T L F K+G VVD F+P+DR G SRGF FV ++ A +A+ AV
Sbjct: 2 LFVGNLSFETDGAALESYFSKWGPVVDCFLPQDRDKGGSRGFGFVTFRDAGDARAAVAEA 61
Query: 78 DGRVVDGREITVQFAKY 94
DG +DGR + V A++
Sbjct: 62 DGAELDGRTVRVNEAEH 78
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G + D+++P+D TG+ RGF FV+Y +A A
Sbjct: 42 SLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYH 101
Query: 77 LDGRVVDGREITVQFAK 93
+DG+V+ GRE+TV FA+
Sbjct: 102 MDGQVLLGRELTVVFAE 118
>gi|344282129|ref|XP_003412827.1| PREDICTED: transformer-2 protein homolog beta-like [Loxodonta
africana]
Length = 390
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 201 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 258
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 259 YFENVDDAKEAKERANGMELDGRRIRVDFS 288
>gi|241812106|ref|XP_002414600.1| splicing factor SC35, putative [Ixodes scapularis]
gi|215508811|gb|EEC18265.1| splicing factor SC35, putative [Ixodes scapularis]
Length = 221
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ ++ T +DL LFEKYGKV V + +D++T S+G AFV + D A + V
Sbjct: 11 TVYVSNLPYKLTNNDLHQLFEKYGKVAKVTVMKDKQTWKSKGVAFVLFVDGDSAARCVAA 70
Query: 77 LDGRVVDGREITVQFAKY 94
LD + + GR + AKY
Sbjct: 71 LDQQQLMGRTLRASIAKY 88
>gi|226496357|ref|NP_001149007.1| RNA-binding motif protein, X-linked 2 [Zea mays]
gi|195623912|gb|ACG33786.1| RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+D+ + V + F T DL +F +YG+VVDV + RD+ TG S+GFAF+ Y+
Sbjct: 32 FKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTI 91
Query: 72 KAVDRLDGRVVDGREITV 89
AVD L+G V GR I V
Sbjct: 92 LAVDNLNGAKVLGRIIKV 109
>gi|237832865|ref|XP_002365730.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
gi|211963394|gb|EEA98589.1| RNA binding motif-containing protein [Toxoplasma gondii ME49]
Length = 208
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +FEK+G+V DV++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 77 LDGRVVDGREITVQFAK 93
+D ++DG E+ V A+
Sbjct: 66 MDRTMIDGNEVHVIIAQ 82
>gi|334324956|ref|XP_001377181.2| PREDICTED: transformer-2 protein homolog beta-like [Monodelphis
domestica]
Length = 299
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 118 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 175
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 176 YFENVDDAKEAKERANGMELDGRRIRVDFS 205
>gi|223946841|gb|ACN27504.1| unknown [Zea mays]
gi|407232618|gb|AFT82651.1| C3H30 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414873727|tpg|DAA52284.1| TPA: RNA-binding motif protein, X-linked 2 [Zea mays]
Length = 298
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+D+ + V + F T DL +F +YG+VVDV + RD+ TG S+GFAF+ Y+
Sbjct: 32 FKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTI 91
Query: 72 KAVDRLDGRVVDGREITV 89
AVD L+G V GR I V
Sbjct: 92 LAVDNLNGAKVLGRIIKV 109
>gi|448878234|gb|AGE46080.1| arginine/serine-rich splicing factor SCL28 transcript III [Zea
mays]
Length = 232
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ NI+ +D+ FE++G + DV++PR+ T + RGF FV+++Y ++A A +
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 78 DGRVVDGREITVQFAK 93
+V+ GREI++ +A+
Sbjct: 119 HHQVIGGREISIVYAE 134
>gi|32352198|dbj|BAC78592.1| pre-mRNA splicing factor [Oryza sativa Japonica Group]
Length = 232
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL FE++G V DV++P+D +G+ RGFAFV + +A +A
Sbjct: 7 SLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYH 66
Query: 77 LDGRVVDGREITVQFA 92
++ +V GREITV A
Sbjct: 67 MNRQVFFGREITVVLA 82
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9806]
Length = 97
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ F DD+ +F++YGK+ V +P DR TG RGFAFV + +E KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V A+
Sbjct: 62 LDGAQWMGRELKVNQAR 78
>gi|285808363|gb|ADC35892.1| RNP-1 like RNA-binding protein [uncultured bacterium 246]
Length = 104
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N++F+TT +L FE YG++ + I DR TG +RGFAFV ++A KA+
Sbjct: 3 NVFVGNMSFQTTEGELRAAFETYGEIARIQIMTDRDTGQARGFAFVEMTNDEDAAKAIAG 62
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPR 123
L+G +DGR + V AK P QG + G SR R R
Sbjct: 63 LNGTQLDGRALNVNEAKPKP------QGGGARGGNDRGGYSRDRGSR 103
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T L V ++ TT + L F +YG+VV+ I DR S+GF FV Y DEAQKA+
Sbjct: 38 TTKLFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKAL 97
Query: 75 DRLDGRVVDGREITVQFAKYGPN 97
D ++G+ ++GR I V +AK N
Sbjct: 98 DEMNGKALNGRVIYVDYAKLKTN 120
>gi|147906061|ref|NP_001079913.1| RNA binding motif protein, X-linked 2 [Xenopus laevis]
gi|34783857|gb|AAH56844.1| MGC64376 protein [Xenopus laevis]
Length = 272
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D +D+ + + + F T D+ +F +YG+VV++ + RD+ +G SRGF FV ++
Sbjct: 31 DYKDSAWIFIGGLPFELTEGDVICVFSQYGEVVNINLARDKSSGRSRGFCFVCFEDQRST 90
Query: 71 QKAVDRLDGRVVDGREITV-QFAKYGP--NAEKIQQGRIVESSSKSKGRSRSRSPRPRYR 127
AVD L+G + GR I V A Y P +AE I + I ++ + +R+ SP +
Sbjct: 91 VLAVDNLNGIKLKGRTIRVDHVANYRPPKDAEDIDE--ITQTLREKGCAARTPSPTSSSQ 148
Query: 128 DEHRD 132
DE +
Sbjct: 149 DEEEE 153
>gi|221488187|gb|EEE26401.1| hypothetical protein TGGT1_109290 [Toxoplasma gondii GT1]
gi|221508700|gb|EEE34269.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 208
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +FEK+G+V DV++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEESTAQEAMRE 65
Query: 77 LDGRVVDGREITVQFAK 93
+D ++DG E+ V A+
Sbjct: 66 MDRTMIDGNEVHVIIAQ 82
>gi|21758154|dbj|BAC05256.1| unnamed protein product [Homo sapiens]
Length = 252
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 71 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 128
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 129 YFENVDDAKEAKERANGMELDGRRIRVDFS 158
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9808]
Length = 97
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ F DD+ +F++YGK+ V +P DR TG RGFAFV + +E KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V A+
Sbjct: 62 LDGAQWMGRELKVNQAR 78
>gi|338716139|ref|XP_003363400.1| PREDICTED: transformer-2 protein homolog beta-like isoform 2 [Equus
caballus]
Length = 254
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 73 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 130
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 131 YFENVDDAKEAKERANGMELDGRRIRVDFS 160
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++FRTT + L F+ +G++V+V + DR RGFAF+RY +E+QKA++ +
Sbjct: 90 LYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGM 149
Query: 78 DGRVVDGREITVQFAK 93
G+ +DGR I V+ AK
Sbjct: 150 HGKFLDGRVIFVEVAK 165
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+ F DD+ +F++YGK+ V +P DR TG RGFAFV + +E KA+
Sbjct: 2 SIYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GRE+ V A+
Sbjct: 62 LDGAQWMGRELKVNQAR 78
>gi|448878352|gb|AGE46139.1| arginine/serine-rich splicing factor SCL25B transcript IV [Sorghum
bicolor]
Length = 174
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL F ++G++ D+++PRD TG+ RGF FV+Y D+A A
Sbjct: 38 SLLVRNLRRDCRPEDLRRPFGQFGRLKDIYLPRDYYTGEPRGFGFVQYYDPDDAADAKYY 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+VV GR+ITV FA+
Sbjct: 98 MDGQVVLGRQITVVFAE 114
>gi|357490653|ref|XP_003615614.1| RNA binding domain protein [Medicago truncatula]
gi|355516949|gb|AES98572.1| RNA binding domain protein [Medicago truncatula]
Length = 393
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V I F T D+ +F +YG+VVD+ + RD+ TG S+GFAF+ Y+
Sbjct: 33 KDSAYVFVGGIPFDFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNL 92
Query: 73 AVDRLDGRVVDGREITV 89
AVD L+G V GR I V
Sbjct: 93 AVDNLNGAQVSGRIIRV 109
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R SLLV NI+ R +D+ FE+YG+V DV+IP+D T + +GFAFV ++ EA
Sbjct: 229 RGGISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADD 288
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A LDG +DGR+I V FA+
Sbjct: 289 ARRNLDGVRIDGRDIRVVFAQ 309
>gi|449304345|gb|EMD00352.1| hypothetical protein BAUCODRAFT_28706 [Baudoinia compniacensis UAMH
10762]
Length = 304
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 6 KSGPP------DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGF 59
K PP D RDT + + + F + D+ +F +YG V + + RD+ TG S+GF
Sbjct: 17 KCVPPNASWHTDYRDTAYIYIGGLPFELSEGDVLTIFSQYGNPVHINLVRDKETGKSKGF 76
Query: 60 AFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKY 94
AF++Y+ AVD L G V GR I+V +Y
Sbjct: 77 AFLKYEDQRSCDLAVDNLSGAGVMGRVISVDHTRY 111
>gi|423225541|ref|ZP_17212008.1| hypothetical protein HMPREF1062_04194 [Bacteroides
cellulosilyticus CL02T12C19]
gi|392632469|gb|EIY26429.1| hypothetical protein HMPREF1062_04194 [Bacteroides
cellulosilyticus CL02T12C19]
Length = 129
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ T +D L LF +YG+V +I DR TG SRGF FV +E QKA+D
Sbjct: 2 NIYVANLSWNTNSDSLQELFSQYGEVTSAYIINDRETGRSRGFGFVEMPNDEEGQKAIDA 61
Query: 77 LDGRVVDGREITVQFAK 93
L+ +G+ I + A+
Sbjct: 62 LNETEFEGKNIAISVAR 78
>gi|242040845|ref|XP_002467817.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
gi|241921671|gb|EER94815.1| hypothetical protein SORBIDRAFT_01g034590 [Sorghum bicolor]
Length = 190
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ NI+ +D+ FE++G + DV++PR+ T + RGF FV+++Y ++A A +
Sbjct: 59 LLIRNISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ +A+
Sbjct: 119 NHQVIGGREISIVYAE 134
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
V N+++ TT D L F +YG+VVD + RDR TG SRGF FV + EA+ A++ L
Sbjct: 7 VGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINSLHE 66
Query: 80 RVVDGREITVQFAKYGP 96
+ +DGR I V A P
Sbjct: 67 QDLDGRRIKVNLANARP 83
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5 [Canis
lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix
jacchus]
Length = 172
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITVQFAKYGPNA 98
+G+ VDGR+I V A P++
Sbjct: 68 NGKSVDGRQIRVDQAGKSPDS 88
>gi|195648951|gb|ACG43943.1| FUS-interacting serine-arginine-rich protein 1 [Zea mays]
gi|448878230|gb|AGE46078.1| arginine/serine-rich splicing factor SCL28 transcript I [Zea mays]
Length = 240
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ NI+ +D+ FE++G + DV++PR+ T + RGF FV+++Y ++A A +
Sbjct: 59 LLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKREM 118
Query: 78 DGRVVDGREITVQFAK 93
+V+ GREI++ +A+
Sbjct: 119 HHQVIGGREISIVYAE 134
>gi|62087996|dbj|BAD92445.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) variant [Homo sapiens]
Length = 278
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 95 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 152
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 153 YFENVDDAKEAKERANGMELDGRRIRVDFS 182
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITVQFAKYGPNA 98
+G+ VDGR+I V A P++
Sbjct: 68 NGKSVDGRQIRVDQAGKSPDS 88
>gi|340914863|gb|EGS18204.1| hypothetical protein CTHT_0062190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 344
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ LFEKYG+V I RD TG+SRGF FV+ +++A+ A++
Sbjct: 73 NLFVTGIHPRLEESEITRLFEKYGEVEKCQIMRDPHTGESRGFGFVKMMTSEQAEAAMEG 132
Query: 77 LDGRVVDGREITVQFAK 93
L G +++GR + ++ A+
Sbjct: 133 LKGEIIEGRTLNIEKAR 149
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+V+++
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
EA+ A+ L+ + V GR+I +QFA+
Sbjct: 63 EAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|196232841|ref|ZP_03131691.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
gi|196223040|gb|EDY17560.1| RNP-1 like RNA-binding protein [Chthoniobacter flavus Ellin428]
Length = 107
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 44/72 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N++F TT DL F + G V + + +D+ TG SRGF FV ++EAQKA+D
Sbjct: 5 LYVGNLSFDTTEMDLQDTFAEAGTVSEATLMQDKFTGKSRGFGFVTMSSSEEAQKAIDLF 64
Query: 78 DGRVVDGREITV 89
G+ V GR +TV
Sbjct: 65 HGKTVQGRALTV 76
>gi|393906773|gb|EFO27553.2| hypothetical protein LOAG_00933 [Loa loa]
Length = 344
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + DDL LFE+ G V DV+IP D T +SRGFA+V++++ +A+ A+ +
Sbjct: 15 TLYVRQVHYSARPDDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRK 74
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP 122
L+G + GR I V++A+ + + R SS + + R RSRSP
Sbjct: 75 LNGASILGRPIEVEWAEGQRKTKTEMRARDSYSSYRVRNRYRSRSP 120
>gi|56269656|gb|AAH86795.1| Sfrs10 protein [Mus musculus]
Length = 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + G +I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGHQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
++ SL+V N+ + T+ + LF +YG++ DV++P D +G RGF FV + + +A
Sbjct: 66 ESCSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFCDPRDVVEA 125
Query: 74 VDRLDGRVVDGREITVQFAKYG 95
+ +DG+VVDG I V A+ G
Sbjct: 126 KNAMDGKVVDGNAIQVDIAQRG 147
>gi|348582426|ref|XP_003476977.1| PREDICTED: transformer-2 protein homolog beta-like [Cavia
porcellus]
Length = 337
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 153 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 210
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 211 YFENVDDAKEAKERANGMELDGRRIRVDFS 240
>gi|242037549|ref|XP_002466169.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
gi|241920023|gb|EER93167.1| hypothetical protein SORBIDRAFT_01g002770 [Sorghum bicolor]
Length = 298
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+D+ + V + F T DL +F +YG+VVDV + RD+ TG S+GFAF+ Y+
Sbjct: 32 FKDSAYVYVGGVPFDLTEGDLLAIFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTI 91
Query: 72 KAVDRLDGRVVDGREITV 89
AVD L+G V GR I V
Sbjct: 92 LAVDNLNGAKVLGRIIRV 109
>gi|281354031|gb|EFB29615.1| hypothetical protein PANDA_003724 [Ailuropoda melanoleuca]
Length = 249
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 144 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 201
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 202 YFENVDDAKEAKERANGMELDGRRIRVDFS 231
>gi|375144786|ref|YP_005007227.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361058832|gb|AEV97823.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 102
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
+L V N+ F+ DDL LF +YG+V + DR TG SRGF FV +EA+KA+
Sbjct: 1 MNLYVSNLGFQVNDDDLAKLFSQYGQVSSAKVIMDRETGRSRGFGFVEMSSDEEARKAIK 60
Query: 76 RLDGRVVDGREITV 89
L+G+ V+GR ++V
Sbjct: 61 ELEGKPVEGRSLSV 74
>gi|197100753|ref|NP_001125414.1| transformer-2 protein homolog beta [Pongo abelii]
gi|55727979|emb|CAH90742.1| hypothetical protein [Pongo abelii]
Length = 288
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSSYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|293675|gb|AAA39332.1| IFN-response element binding factor 2, partial [Mus musculus]
Length = 277
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
PPD+ SL V N+T+RT+ D L +FEKYG+V DV+IPRDR T +SRGFA
Sbjct: 53 PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFA 104
>gi|396499970|ref|XP_003845608.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
gi|312222189|emb|CBY02129.1| hypothetical protein LEMA_P009160.1 [Leptosphaeria maculans JN3]
Length = 325
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V + + RD+ TG SRGFA+++Y+
Sbjct: 28 DYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSC 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGP 96
AVD L G + R I V A+Y P
Sbjct: 88 DLAVDNLGGATIMDRVIRVDHARYKP 113
>gi|209878256|ref|XP_002140569.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
gi|209556175|gb|EEA06220.1| RNA recognition motif. family protein [Cryptosporidium muris
RN66]
Length = 244
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ ++ F T + +FE++G++ DV++P D T RGF FV Y +A A+ R
Sbjct: 14 SLLIRSLRFETPPSLVRRVFERFGQIRDVYLPVDFHTKRPRGFGFVEYVEESDALAAIQR 73
Query: 77 LDGRVVDGREITVQFAKYG 95
++G +DG +I V FA+ G
Sbjct: 74 MNGANLDGSQIHVTFAQEG 92
>gi|68065706|ref|XP_674837.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493667|emb|CAH97904.1| conserved hypothetical protein [Plasmodium berghei]
Length = 245
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 11/145 (7%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ + SLL+ N++F T D + +FE +GK+ DV++P D T RGF FV Y A+
Sbjct: 2 VENGCSLLIRNLSFET-PDKVRKIFEHFGKIRDVYLPLDHYTRRPRGFGFVEYYDPKHAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKY---GPNAEKIQQGRIVESSSKS-KGRSRSRSPR---P 124
+A++ L+ +DG+EI + A+ P+ K + +S +S K + +R R
Sbjct: 61 EALNILNNSKIDGKEIRIIVAQNRRKSPDTMKKYHNNLNDSKYRSYKYENNNREKRRRIS 120
Query: 125 RYRDEHRDKDYRRRSRSRSRERYDR 149
RY R +D RSR SRERY+R
Sbjct: 121 RYPSIDRSRD---RSRDISRERYNR 142
>gi|238499545|ref|XP_002381007.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|83772685|dbj|BAE62813.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692760|gb|EED49106.1| RNA recognition motif containing protein, putative [Aspergillus
flavus NRRL3357]
gi|391869311|gb|EIT78510.1| putative RNA-binding protein [Aspergillus oryzae 3.042]
Length = 291
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY--------GPNAEKIQQGRIVESS 110
AVD L G V GR + V +Y G N K+ +V+S+
Sbjct: 88 DLAVDNLGGSTVLGRILRVDHVRYKRRDDEEEGDNVAKLMGDAVVKSA 135
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 35 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 94
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 95 NGKSVDGRQIRV 106
>gi|410342937|gb|JAA40415.1| transformer 2 beta homolog [Pan troglodytes]
Length = 288
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HVGNRANPD--PNCCLGVFGLSLYTTERDLREHFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 165 YFENVDDAKEAKERANGMELDGRRIRVDFS 194
>gi|45382747|ref|NP_990009.1| transformer-2 protein homolog beta [Gallus gallus]
gi|224059830|ref|XP_002195659.1| PREDICTED: transformer-2 protein homolog beta isoform 1
[Taeniopygia guttata]
gi|11494371|gb|AAG35783.1|AF282244_1 transformer-2 beta [Gallus gallus]
Length = 289
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 107 HIGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++A++A +R +G +DGR I V F+
Sbjct: 165 YFENVEDAKEAKERANGMELDGRRIRVDFS 194
>gi|242035637|ref|XP_002465213.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|241919067|gb|EER92211.1| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor]
gi|448878340|gb|AGE46133.1| arginine/serine-rich splicing factor SCL25A transcript I [Sorghum
bicolor]
gi|448878342|gb|AGE46134.1| arginine/serine-rich splicing factor SCL25A transcript II [Sorghum
bicolor]
Length = 213
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G+V D+++P+D T + +GF F++Y ++A A
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPKDYYTREPKGFGFIQYFDPEDASDAKYH 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+++ GREITV FA+
Sbjct: 98 MDGQMLLGREITVVFAE 114
>gi|399216355|emb|CCF73043.1| unnamed protein product [Babesia microti strain RI]
Length = 298
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R YS+LV N+ TT + + FEK+G++ DV++P D T RGF FV + + A++
Sbjct: 5 RSGYSVLVRNLLETTTPELVRETFEKFGEIRDVYLPTDFFTHKPRGFGFVEFYKLESAKE 64
Query: 73 AVDRLDGRVVDGREITVQFAK 93
AV +D + +DG ++V A+
Sbjct: 65 AVKEMDNKTIDGATVSVTPAQ 85
>gi|356526389|ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
1-like [Glycine max]
Length = 617
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V I F T DL P+F +YG+VVDV + RD+ TG S+ FAF+ Y+ A
Sbjct: 33 KDSAYIFVGGIPFDLTEGDLLPVFAQYGEVVDVNLVRDKGTGKSKDFAFLAYEDQRSADL 92
Query: 73 AVDRLDGRVVDGREITV 89
AVD L+G V GR I V
Sbjct: 93 AVDNLNGAQVLGRIIKV 109
>gi|344270941|ref|XP_003407300.1| PREDICTED: RNA-binding protein 28 isoform 1 [Loxodonta africana]
Length = 755
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL +F ++G V++V IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTIFAQFGAVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKGM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P D+ + ++ + N++F + +DL L +++G + V I T S+G AFV++ +
Sbjct: 324 PSDVNEGKTVFIRNLSFDSEEEDLGELLQQFGDLKYVRIVLHPDTEHSKGCAFVQFLTQE 383
Query: 69 EAQKAVDRLD------GRVVDGREITVQFAKYGPNAEKIQQGRI 106
AQK + G +DGR++ V A A K+Q ++
Sbjct: 384 AAQKCLAAASPETEGGGLKLDGRQLKVDLAVTRDEAAKLQTKKV 427
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|405117757|gb|AFR92532.1| transformer-2-beta isoform 3 [Cryptococcus neoformans var. grubii
H99]
Length = 214
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
+++ T L V ++ RTT DL F ++GK+ + I D+RTG SRGFAF+ + ++A
Sbjct: 36 EVKPTNILGVFGLSVRTTERDLQDEFSRHGKIEKIVIVYDQRTGRSRGFAFITMRSIEDA 95
Query: 71 QKAVDRLDGRVVDGREITVQFA 92
+ +DRL+G + GR I V ++
Sbjct: 96 TQCIDRLNGLTIHGRNIRVDYS 117
>gi|387019387|gb|AFJ51811.1| Transformer-2 protein [Crotalus adamanteus]
Length = 187
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 7 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 64
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 65 YFESVDDAKEAKERANGMELDGRRIRVDFS 94
>gi|209875787|ref|XP_002139336.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209554942|gb|EEA04987.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 10/159 (6%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ RT DDL LFE+YGKV D + + +G+SR F FV +EA +A D
Sbjct: 79 TLYVCRLSLRTKEDDLRRLFEEYGKVTDCRLVTNPLSGESRCFGFVTMSCPEEAARARDA 138
Query: 77 LDGRVVDGREITVQFAKYG------PNAEKIQQGRIVESSSKSK-GRSRSRSPRPRYRDE 129
LD + + V+ A+ P K Q R ++ +S S+ G RS
Sbjct: 139 LDCKEYQDANLKVEMARRAKPYEPTPGEYKGPQYRSIKYNSSSRNGPPRSYRGHSSRPSS 198
Query: 130 HRDKDYRRRSRSRSR-ERYDR--DRYRSKERDHRRRSRS 165
DY +S S +R E+Y+R D Y S+ DHR SRS
Sbjct: 199 RSRYDYPPQSSSHTRSEQYNRHDDYYNSRYSDHRYPSRS 237
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D +S+ V I R DDL F K+G++ DVFIP DR TG SRGF FVR+ +A+
Sbjct: 6 LNDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAE 65
Query: 72 KAVDRLDGRVVDGREITVQFAKY 94
A+ +D + G ITV A Y
Sbjct: 66 DAIRDMDNKEFQGCRITVAAAMY 88
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V NI+ + +DL F +YG +VDV+IP D T RGFA+++++
Sbjct: 7 PPNT----SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ LD + V GR+I +QFA+
Sbjct: 63 DAEDALHSLDRKWVCGRQIEIQFAQ 87
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 20 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 79
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 80 NGKSVDGRQIRV 91
>gi|357112219|ref|XP_003557907.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 219
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G++ D+++PRD T + RGF F++Y ++A A
Sbjct: 38 SLLVRNLRRDCRPDDLRRPFGKFGRLKDIYLPRDYYTQEPRGFGFIQYYDPEDAADAQYH 97
Query: 77 LDGRVVDGREITVQFAK 93
+DG+++ GRE+ V FA+
Sbjct: 98 MDGQILLGREVAVVFAE 114
>gi|308803152|ref|XP_003078889.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
gi|116057342|emb|CAL51769.1| putative small nuclear ribonucleoprotein (ISS) [Ostreococcus tauri]
Length = 269
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+LV N+++ DD+ F YG ++DV++P+DR TG RG AFV+Y EA AVD
Sbjct: 45 SVLVRNLSWDAREDDVRDRFAGYGNILDVYMPKDRETGRPRGLAFVKYATQSEADAAVDG 104
Query: 77 LDGRVVDGREITVQFA 92
G + GREI + A
Sbjct: 105 GVGDFL-GREIRCEIA 119
>gi|295666436|ref|XP_002793768.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
gi|226277421|gb|EEH32987.1| RNA binding domain-containing protein [Paracoccidioides sp.
'lutzii' Pb01]
Length = 280
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + ++ + + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
AVD L G + GR I V +Y E+ + + +S G +SR
Sbjct: 84 QRSTDLAVDNLGGATILGRMIRVDHVRYKRKEEEGLEDNVAALASAETGEEKSR 137
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 104
>gi|313231155|emb|CBY19153.1| unnamed protein product [Oikopleura dioica]
gi|313242052|emb|CBY34232.1| unnamed protein product [Oikopleura dioica]
Length = 266
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V NI D+L F +YG + DV+IPRD RGFA+V++ +A+ A +
Sbjct: 12 SLFVRNIADDIDQDELTREFSRYGSIKDVYIPRDYYNKRPRGFAYVQFADIHDAEDAQEG 71
Query: 77 LDGRVVDGREITVQFAK 93
+DGR V GR I VQFAK
Sbjct: 72 MDGRKVCGRFIDVQFAK 88
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
+ P + Y L V N++FRT + L FE +G++V + +R TG SRGF FV Y+
Sbjct: 21 TSPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRETGQSRGFGFVVYEQ 80
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAK 93
EA A+ R+D +DGR + V FA+
Sbjct: 81 KHEADAAISRMDNAELDGRTLRVNFAR 107
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G DI DT L V N+++ T D L LF ++G +V++ +P D+ + + GFAFV +
Sbjct: 397 GDEADEDISDTGRLFVRNLSYTCTEDSLTNLFSQFGPLVEINLPIDKNSNKTTGFAFVTF 456
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS 111
AD A KA+ +LDG + +GR + + K ++K+++ +SSS
Sbjct: 457 MMADHAIKAMSKLDGSIFEGRILHILPGK----SKKVKEEDNTQSSS 499
Score = 37.7 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++V NI F T +L LF +G + + +P+ + TG RGFAF+ + +A++A L
Sbjct: 794 MVVRNIPFEATVKELQELFSTFGHIKSLRLPK-KITGTHRGFAFIDFTTKQDAKRAFKAL 852
Query: 78 -DGRVVDGREITVQFA 92
+ GR + +++A
Sbjct: 853 CQSTHLYGRRLVLEWA 868
>gi|345197228|ref|NP_001230808.1| transformer-2 protein homolog beta isoform 2 [Homo sapiens]
gi|410037850|ref|XP_003950298.1| PREDICTED: transformer-2 protein homolog beta [Pan troglodytes]
gi|426343201|ref|XP_004038203.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Gorilla
gorilla gorilla]
gi|441633316|ref|XP_004089753.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Nomascus
leucogenys]
gi|4377849|gb|AAD19278.1| transformer-2-beta isoform 3 [Homo sapiens]
gi|119598610|gb|EAW78204.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598611|gb|EAW78205.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598614|gb|EAW78208.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|194375203|dbj|BAG62714.1| unnamed protein product [Homo sapiens]
Length = 188
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 7 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 64
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 65 YFENVDDAKEAKERANGMELDGRRIRVDFS 94
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana)
tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana)
tropicalis]
Length = 166
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + F TT + L +F KYG+V +V + +DR + SRGF FV ++ ++A+ A+ +
Sbjct: 8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ T L F KYG+VVD I DR TG SRGF F+ Y +EA A+ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 78 DGRVVDGREITVQFAK 93
DG+ + GR I V +A
Sbjct: 104 DGQDLHGRPIRVNYAN 119
>gi|124804262|ref|XP_001347950.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|23496204|gb|AAN35863.1| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 914
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+L+ N+ + T+ D + +FE GKV DV++P D T RGF FV Y + A++A++
Sbjct: 7 SILIRNLNYDTSPDKVRKIFENVGKVKDVYLPLDHYTRKPRGFGFVEYFESKYAKEAINI 66
Query: 77 LDGRVVDGREITVQFAK 93
L+ +DG EI + A+
Sbjct: 67 LNHSRIDGNEIRIIIAQ 83
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus
adamanteus]
Length = 234
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T +DL F +YG VVDV+IP D T RGFA+++++
Sbjct: 7 PPNT----SLFVRNVADATRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 DAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|449460375|ref|XP_004147921.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Cucumis sativus]
Length = 395
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V I + T DL +F +YG++VDV + RD+ TG S+G+AFV Y+
Sbjct: 33 KDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNL 92
Query: 73 AVDRLDGRVVDGREITV 89
AVD L+G + GR + V
Sbjct: 93 AVDNLNGAQILGRIVRV 109
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 2 SHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF 61
+H GK+ D L V ++F T L +F KYG++ +V + +DR T SRGF F
Sbjct: 41 AHHGKA--TMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGF 98
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITV 89
V ++ D+A+ A+ ++G+ VDGR+I V
Sbjct: 99 VTFENIDDAKDAMMAMNGKSVDGRQIRV 126
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ F T D+ LF +GKV V + +DR T SRG AFV Y ++A KA
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARS 117
Query: 77 LDGRVVDGREITVQFA 92
+D ++++GR++TV A
Sbjct: 118 MDAKILNGRKLTVSIA 133
>gi|358253472|dbj|GAA53142.1| serine/arginine-rich splicing factor 10 [Clonorchis sinensis]
Length = 346
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 22 NITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRV 81
N+ T +D++ F+K+G+VV+V IP D T ++G+AFV Y D+A +A++ + G +
Sbjct: 46 NLPDSITYNDVWLEFKKFGEVVNVTIPMDVNTAKAKGYAFVEYADCDDAARALNEMHGIL 105
Query: 82 VDGREITVQFAKYGP 96
+ GR +TVQ+++ P
Sbjct: 106 LWGRILTVQYSRSYP 120
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T +DL F +YG +VDV+IP D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 DAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|242045928|ref|XP_002460835.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
gi|241924212|gb|EER97356.1| hypothetical protein SORBIDRAFT_02g035890 [Sorghum bicolor]
Length = 131
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT++ L F K+G+V++ + DR +G SRGF FV+Y EA +A+
Sbjct: 37 NLFVSGLNKRTTSNGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIKG 96
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS 111
+DG+ +DG I ++AK + QQG E SS
Sbjct: 97 MDGKFLDGWVIFAEYAKQREATQPSQQGAPYEYSS 131
>gi|350538255|ref|NP_001232562.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128621|gb|ACH45119.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N++++ T +DL F +YGKV V +P DR TG RGFAFV DE A++
Sbjct: 2 SIYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|432881665|ref|XP_004073891.1| PREDICTED: transformer-2 protein homolog alpha-like [Oryzias
latipes]
Length = 268
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + LN++ TT DL +F +YG++ + + D+RTG SRGFAF+
Sbjct: 98 HTGTRENPDPSTCLGVFGLNLS--TTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFI 155
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +A++A++ +G +DGR+I V ++
Sbjct: 156 YFERLCDAREAIEHTNGMNMDGRQIRVDYS 185
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|326918654|ref|XP_003205603.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Meleagris gallopavo]
Length = 170
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|197128622|gb|ACH45120.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T + L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEESLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|402226055|gb|EJU06115.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 292
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + + T D+ +F +YG+ V+V +PRD+ TG +GFAF+ Y+
Sbjct: 28 KDSAYIFIGGLPYELTEGDVISIFSQYGEPVNVNMPRDKVTGKPKGFAFLMYEDQQSTVL 87
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
AVD L+G + GR I V N E+ + G++ E+ +
Sbjct: 88 AVDNLNGANIVGRTIRVDHVSKYKNLERGEDGKMKEAEEE 127
>gi|166796147|gb|AAI59019.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|166796532|gb|AAI59007.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D +D+ L + + + + D+ +F +YG+VV++ + RD+ +G SRGF F+ ++
Sbjct: 31 DYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFCFLCFEDQRST 90
Query: 71 QKAVDRLDGRVVDGREITV-QFAKYGP--NAEKIQQGRIVESSSKSKGRSRSRSPRPRYR 127
AVD L+G V GR I V A Y P +AE I + I +S + +R+ SP +
Sbjct: 91 VLAVDNLNGIKVKGRTIRVDHVANYRPPKDAEDIDE--ITQSLREKGCGARTPSPVSSSQ 148
Query: 128 DEHRD 132
DE +
Sbjct: 149 DEEEE 153
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V + + RD+ TG SRGFA+++Y+
Sbjct: 28 DYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSC 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGP 96
AVD L G + R I V A+Y P
Sbjct: 88 DLAVDNLGGASIMDRIIRVDHARYKP 113
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum
CS3096]
Length = 128
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+++ TT D L F ++G+V D I RDR TG +RGF FV + ++A AVD L
Sbjct: 4 LYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDAL 63
Query: 78 DGRVVDGREITVQFAKYGP 96
+ + +DGR I V A P
Sbjct: 64 NEQELDGRRIRVNVANARP 82
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
+ +DT + V + + D+ +F ++G++ D+ +PRD+ TG SRGF FV Y
Sbjct: 6 EFKDTAYIYVGGLHPDLSEGDVITIFSQWGEIADINMPRDKETGASRGFGFVMYMDQRST 65
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQG 104
AVD + G V GR++ V A+Y ++ ++G
Sbjct: 66 VLAVDNMSGAEVLGRKLKVDHARYKQPGKRNEEG 99
>gi|55742374|ref|NP_001006878.1| splicing factor, arginine/serine-rich 10 [Xenopus (Silurana)
tropicalis]
gi|49903569|gb|AAH77018.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog)
[Xenopus (Silurana) tropicalis]
Length = 293
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGF+FV
Sbjct: 111 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFV 168
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 169 YFENVDDAKEAKERANGMELDGRRIRVDFS 198
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ F T D+ LF +GKV V + +DR T SRG AFV Y ++A KA
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARS 117
Query: 77 LDGRVVDGREITVQFA 92
+D ++++GR++TV A
Sbjct: 118 MDAKILNGRKLTVSIA 133
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V NI+ + +DL F +YG +VDV+IP D + RGFA+++++ +A+ A+
Sbjct: 11 SLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFEDVRDAEDALHN 70
Query: 77 LDGRVVDGREITVQFAK 93
LD + V GR+I +QFA+
Sbjct: 71 LDRKWVCGRQIEIQFAQ 87
>gi|356553842|ref|XP_003545260.1| PREDICTED: uncharacterized protein LOC100792397 [Glycine max]
Length = 271
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L FE++G V DV+IP+D +G+ RGFAFV++ +A +A
Sbjct: 41 SLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYH 100
Query: 77 LDGRVVDGREITVQFAK 93
++ ++ GREI+V A+
Sbjct: 101 MNRQIFAGREISVVVAE 117
>gi|219118652|ref|XP_002180094.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408351|gb|EEC48285.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 106
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP + SLL+ N+ + DL F + G+V DV+IPRD + +GFAF+ Y A+
Sbjct: 15 PPGV----SLLIRNVAPDIQSQDLLTAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATAE 70
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A++A D +D VV GRE+ V FA+
Sbjct: 71 QAREARDEMDRFVVRGRELEVVFAQ 95
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T +DL F +YG +VDV++P D T RGFA+++++
Sbjct: 7 PPNT----SLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 DAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ T L F KYG+VVD I DR TG SRGF F+ Y +EA A+ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 78 DGRVVDGREITVQFAK 93
DG+ + GR I V +A
Sbjct: 104 DGQDLHGRPIRVNYAN 119
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|302782525|ref|XP_002973036.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
gi|302805506|ref|XP_002984504.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300147892|gb|EFJ14554.1| hypothetical protein SELMODRAFT_8401 [Selaginella moellendorffii]
gi|300159637|gb|EFJ26257.1| hypothetical protein SELMODRAFT_8400 [Selaginella moellendorffii]
Length = 93
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI+ T ADDL FE+YG V DV++P+D +G+ RGF FV++ +A +A +
Sbjct: 4 SLLVRNISRDTRADDLRGPFERYGAVKDVYLPKDFYSGEPRGFGFVQFIDPRDAIEAQYK 63
Query: 77 LDGRVVDGREITVQFAK 93
++ +++ GRE++V FA+
Sbjct: 64 MNHQLIRGREVSVVFAE 80
>gi|49258180|gb|AAH72952.1| LOC443599 protein, partial [Xenopus laevis]
Length = 304
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGF+FV
Sbjct: 122 HLGNRANPDP--NCCLGVFGLSLYTTERDLREVFSKYGPLSDVSIVYDQQSRRSRGFSFV 179
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 180 YFENVDDAKEAKERANGMELDGRRIRVDFS 209
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
gi|297322142|gb|EFH52563.1| hypothetical protein ARALYDRAFT_485973 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 9/105 (8%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI ++L FE++G V DV+IPRD +G+ RGFAFV + A +A +A +
Sbjct: 48 LLVRNIPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSM 107
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP 122
+ R+ GREITV A + R + K R+RSR P
Sbjct: 108 NRRIFAGREITVVVA---------SESRKRPEEMRVKTRTRSREP 143
>gi|426386443|ref|XP_004059694.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Gorilla
gorilla gorilla]
gi|426386445|ref|XP_004059695.1| PREDICTED: cold-inducible RNA-binding protein isoform 3 [Gorilla
gorilla gorilla]
Length = 168
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|170585176|ref|XP_001897362.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595237|gb|EDP33806.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 340
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 63/106 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + DDL LFE+ G V DV+IP D T +SRGFA+V++++ +A+ A+
Sbjct: 15 TLYVRQVHYSARPDDLRALFEQMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRE 74
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP 122
L+G + GR I V++A+ + + R +S + + R RSRSP
Sbjct: 75 LNGTSILGRRIEVEWAEGQRKTKTEMRARDSYNSYRVRNRYRSRSP 120
>gi|384254118|gb|EIE27592.1| translation initiation factor 3, RNA-binding subunit [Coccomyxa
subellipsoidea C-169]
Length = 285
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R+ S+ V N++ T DDL LF +G + ++I DR TG+SRGFAFV + + ++A +
Sbjct: 199 REENSVRVTNLSEDTREDDLRELFSPFGPISRIYIAYDRETGESRGFAFVNFVHREDAAR 258
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNAEK 100
AV +LDG D + V+FA P AE+
Sbjct: 259 AVQKLDGHGYDNLILRVEFA--APRAER 284
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus
glaber]
Length = 167
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|356499101|ref|XP_003518382.1| PREDICTED: uncharacterized protein LOC100804294 [Glycine max]
Length = 276
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI ++L FE++G V DV+IP+D +G+ RGFAFV++ +A +A
Sbjct: 48 SLLVRNIPLDCRPEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVQFVDPYDASEAQYH 107
Query: 77 LDGRVVDGREITVQFAK 93
++ ++ GREI+V A+
Sbjct: 108 MNRQIFAGREISVVVAE 124
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|62858501|ref|NP_001016941.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
gi|89268233|emb|CAJ83312.1| RNA binding motif protein, X-linked 2 [Xenopus (Silurana)
tropicalis]
Length = 269
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D +D+ L + + + + D+ +F +YG+VV++ + RD+ +G SRGF F+ ++
Sbjct: 31 DYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFCFLCFEDQRST 90
Query: 71 QKAVDRLDGRVVDGREITV-QFAKYGP--NAEKIQQGRIVESSSKSKGRSRSRSPRPRYR 127
AVD L+G V GR I V A Y P +AE I + I +S + +R+ SP +
Sbjct: 91 VLAVDNLNGIKVKGRTIRVDHVANYRPPKDAEDIDE--ITQSLREKGCGARTPSPVSSSQ 148
Query: 128 DE 129
DE
Sbjct: 149 DE 150
>gi|449437540|ref|XP_004136550.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
gi|449516345|ref|XP_004165207.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Cucumis
sativus]
Length = 210
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ +DL LF ++G + D+++PRD +G+ RGF FV++ A +A A
Sbjct: 38 SLLVRNLRHDCRPEDLRGLFGRFGPLKDIYLPRDYYSGEPRGFGFVQFVDAADAADAKYE 97
Query: 77 LDGRVVDGREITVQFAK 93
LDG+V+ G E+TV FA+
Sbjct: 98 LDGQVLLGHELTVVFAE 114
>gi|326925689|ref|XP_003209043.1| PREDICTED: transformer-2 protein homolog beta-like [Meleagris
gallopavo]
Length = 302
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 120 HIGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 177
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++A++A +R +G +DGR I V F+
Sbjct: 178 YFENVEDAKEAKERANGMELDGRRIRVDFS 207
>gi|326475615|gb|EGD99624.1| hypothetical protein TESG_06970 [Trichophyton tonsurans CBS 112818]
gi|326483761|gb|EGE07771.1| transformer-SR ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 304
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R + D+ LFEKYG+V + I D T +SRGF FV D+A+ A +
Sbjct: 67 NLFVTGIHPRLSEADVTRLFEKYGEVENCSIMLDPHTKESRGFGFVNMATPDQAEAAREG 126
Query: 77 LDGRVVDGREITVQFAK 93
L G V+DGR ++++ A+
Sbjct: 127 LQGEVIDGRTLSIEKAR 143
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|303282859|ref|XP_003060721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458192|gb|EEH55490.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ + T +++ FE+YG+V DV+IP+D T +GFAFV + EA+ A D+
Sbjct: 2 SLLVRNLPYDATVEEIRTAFEEYGEVRDVYIPKDYHTKRPKGFAFVEFPDPREAELAEDK 61
Query: 77 LDGRVVDGREITVQFAK 93
LD + G E++VQ AK
Sbjct: 62 LDKTRLCGVEVSVQVAK 78
>gi|212723388|ref|NP_001131976.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|194693082|gb|ACF80625.1| unknown [Zea mays]
gi|195620736|gb|ACG32198.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|413955616|gb|AFW88265.1| Splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878236|gb|AGE46081.1| arginine/serine-rich splicing factor SCL25A transcript I [Zea mays]
Length = 216
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ DDL F K+G V D+++P+D T + RGF F++Y ++A A
Sbjct: 40 SLLVRNLRRDCRPDDLRRPFGKFGPVKDIYLPKDYYTREPRGFGFIQYFDPEDASDAKYY 99
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSS----KSKGRSRSRSP 122
+DG+++ GREI V FA+ N +K R E S GR RSRSP
Sbjct: 100 MDGKMLLGREIAVVFAEE--NRKKPSDMRAREKISGRGRSYDGRLRSRSP 147
>gi|327297170|ref|XP_003233279.1| hypothetical protein TERG_06272 [Trichophyton rubrum CBS 118892]
gi|326464585|gb|EGD90038.1| hypothetical protein TERG_06272 [Trichophyton rubrum CBS 118892]
Length = 301
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R + D+ LFEKYG+V + I D T +SRGF FV D+A+ A +
Sbjct: 68 NLFVTGIHPRLSEADVTRLFEKYGEVENCSIMLDPHTKESRGFGFVNMATPDQAEAAREG 127
Query: 77 LDGRVVDGREITVQFAK 93
L G V+DGR ++++ A+
Sbjct: 128 LQGEVIDGRTLSIEKAR 144
>gi|197128626|gb|ACH45124.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|327290660|ref|XP_003230040.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 176
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|347839370|emb|CCD53942.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + + F + D+ +F +YG+ + + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHTDYRDTAYIYIGGLPFELSEGDILTIFSQYGEPTYINLIRDKETGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V+ GR + V +Y
Sbjct: 84 QRSTDLAVDNLGGAVIAGRTLKVDHTRY 111
>gi|345313298|ref|XP_001514404.2| PREDICTED: transformer-2 protein homolog beta-like [Ornithorhynchus
anatinus]
Length = 478
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 209 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 266
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 267 YFENVDDAKEAKERANGMELDGRRIRVDFS 296
>gi|334183335|ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 300
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTG------------DSRGFAFVRY 64
SLLV N+ +DL FE++G V D+++PRD TG D RGF FV++
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQF 96
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRS 121
+A A +DG ++ GRE+TV FA+ N +K + R E S+ R R R+
Sbjct: 97 MDPADAADAKHHMDGYLLLGRELTVVFAEE--NRKKPTEMRARERGGGSRFRDRRRT 151
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c
[Taeniopygia guttata]
Length = 175
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T SLLV N+ + TT + L FEK+G + DV+IP + T RGF FV + +A A+
Sbjct: 34 TMSLLVRNLKYETTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFVEFHDFRDANMAL 93
Query: 75 DRLDGRVVDGREITVQFAKYG 95
+DG +DG +I V AK G
Sbjct: 94 REMDGGELDGNKIEVFAAKRG 114
>gi|428673153|gb|EKX74066.1| serine/arginine rich splicing factor, putative [Babesia equi]
Length = 183
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ + T+ D + LF +YG++ DV++P D T RGF FV + ++A +A+
Sbjct: 14 SLLVKNLKYETSPDKVRSLFSRYGEIRDVYLPLDYYTKKPRGFGFVEFYKEEDADEALRG 73
Query: 77 LDGRVVDGREITVQFAKYG 95
+DG +DG ++ V AK+G
Sbjct: 74 MDGEEIDGNKVEVFPAKHG 92
>gi|410924411|ref|XP_003975675.1| PREDICTED: cold-inducible RNA-binding protein-like [Takifugu
rubripes]
Length = 170
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + ++F T + L F KYG + V + RD+ TG SRGF FV+Y+ ++A+
Sbjct: 1 MSDEGKLFIGGLSFETNEESLAEAFGKYGTIEKVDVIRDKETGRSRGFGFVKYESVEDAK 60
Query: 72 KAVDRLDGRVVDGREITVQFAKYG 95
A+ ++G+ +DGR I V A G
Sbjct: 61 DAMTAMNGKSLDGRAIRVDEAGKG 84
>gi|58266538|ref|XP_570425.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111146|ref|XP_775715.1| hypothetical protein CNBD4440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258379|gb|EAL21068.1| hypothetical protein CNBD4440 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226658|gb|AAW43118.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 253
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GP + +L V ++ T L LF + GKV V I D + +SRGF FV +
Sbjct: 62 GPNTVNQGNNLHVSGLSRAVTERQLEDLFSQIGKVAKVQIMVDPHSQESRGFGFVMMESP 121
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYG 95
+EAQ A+D+L G+ V+G+ ITV A+ G
Sbjct: 122 EEAQAAIDQLSGQNVEGKSITVAHARRG 149
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|345564220|gb|EGX47200.1| hypothetical protein AOL_s00097g39 [Arthrobotrys oligospora ATCC
24927]
Length = 333
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T +D+ LF KYG+++ I D T +SRGF FV + +D+A A D
Sbjct: 78 NLFVTGIHPRLTEEDVTRLFGKYGEIIKCNIMVDPHTKESRGFGFVNFAQSDQADAAKDA 137
Query: 77 LDGRVVDGREITVQFAK 93
L G V +GR ++++ A+
Sbjct: 138 LQGEVYEGRTLSIEKAR 154
>gi|336472231|gb|EGO60391.1| hypothetical protein NEUTE1DRAFT_107026 [Neurospora tetrasperma
FGSC 2508]
gi|350294548|gb|EGZ75633.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 343
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ LFEKYG+V I +D TG+SRGF FV+ ++A A +
Sbjct: 75 NLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKEG 134
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 135 LQGEVIEGRTLSIEMAR 151
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|396472554|ref|XP_003839148.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
gi|312215717|emb|CBX95669.1| hypothetical protein LEMA_P028210.1 [Leptosphaeria maculans JN3]
Length = 379
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N+ + TAD L +F ++G++ +V I D R G SRGF +V +K +AQ A+D
Sbjct: 193 TLYIGNLYYEVTADQLQRVFSRFGEIENVKIIYDNR-GLSRGFGYVEFKNIPDAQTAIDN 251
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKS 113
LD +V +GR + VQF + P K + S SK+
Sbjct: 252 LDMQVFEGRNLVVQFHREKPGFGKNNRANSTNSPSKT 288
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N++F + DL LF + VVDV + DRRTG RGFA + A A +
Sbjct: 288 TLFIGNMSFEMSDKDLNDLFREVRNVVDVRVAIDRRTGQPRGFAHADFLDIASATHAKNI 347
Query: 77 LDGRVVDGREITVQFA 92
L +VV GRE+ + F+
Sbjct: 348 LANKVVYGRELRIDFS 363
>gi|262199927|ref|YP_003271136.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262083274|gb|ACY19243.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 207
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVV-DVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V N+++ TT + L +FE+ GK V V I DR TG SRGFAFV+ D A++A++
Sbjct: 5 LYVGNLSYSTTEEALRSVFEEGGKEVRSVAIILDRETGRSRGFAFVQMASEDAAREAMES 64
Query: 77 LDGRVVDGREITVQFAK 93
LDGR +DGR++ + A+
Sbjct: 65 LDGRELDGRQMRITEAR 81
>gi|226286984|gb|EEH42497.1| RNA binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 280
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + ++ + + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
AVD L G + GR I V +Y E+ + + ++ G +SR
Sbjct: 84 QRSTDLAVDNLGGATILGRMIRVDHVRYKRKEEEGLEDNVAALATAETGEEKSR 137
>gi|301619753|ref|XP_002939264.1| PREDICTED: hypothetical protein LOC100497806 [Xenopus (Silurana)
tropicalis]
Length = 280
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D +D+ L + + + + D+ +F +YG+VV++ + RD+ +G SRGF F+ ++
Sbjct: 42 DYKDSAWLFIGGLPYELSEGDIICVFSQYGEVVNINLVRDKSSGRSRGFCFLCFEDQRST 101
Query: 71 QKAVDRLDGRVVDGREITV-QFAKYGP--NAEKIQQGRIVESSSKSKGRSRSRSPRPRYR 127
AVD L+G V GR I V A Y P +AE I + I +S + +R+ SP +
Sbjct: 102 VLAVDNLNGIKVKGRTIRVDHVANYRPPKDAEDIDE--ITQSLREKGCGARTPSPVSSSQ 159
Query: 128 DE 129
DE
Sbjct: 160 DE 161
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 20 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 79
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 80 NGKSVDGRQIRV 91
>gi|145346679|ref|XP_001417812.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578040|gb|ABO96105.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 98
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
PDI + S+ + N+++ +DL FEK+G V DV+IP++R + +RGFAFVRY +
Sbjct: 1 PDISNLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKERGSYRARGFAFVRYHSREH 60
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYG 95
A+ AV + + GR I A+ G
Sbjct: 61 AEAAVSAMHETELGGRHIRAAIAERG 86
>gi|16944647|emb|CAC28728.2| conserved hypothetical protein [Neurospora crassa]
Length = 343
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ LFEKYG+V I +D TG+SRGF FV+ ++A A +
Sbjct: 75 NLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKEG 134
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 135 LQGEVIEGRTLSIEMAR 151
>gi|354470655|ref|XP_003497560.1| PREDICTED: RNA-binding protein 28 isoform 1 [Cricetulus griseus]
Length = 707
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L++ N++F+ + DDL F YG V++V IPR + G RGFAFV++K EA KA+ +
Sbjct: 116 LIIRNLSFKCSEDDLKTAFTPYGTVLEVNIPR-KPDGKMRGFAFVQFKNLLEAGKALKGM 174
Query: 78 DGRVVDGREITVQFA 92
+ + + GR + V +A
Sbjct: 175 NMKEIKGRTVAVDWA 189
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
P D+ + ++ + N++F + +DL + +++G + V I T S+G F ++ +
Sbjct: 330 PSDVNEGKTVFIRNLSFESEEEDLGEVLQQFGDLKYVRIVLHPDTEHSKGCGFAQFMTQE 389
Query: 69 EAQKAVDRLD------GRVVDGREITVQFAKYGPNAEKIQQGRI 106
AQK + G +DGR + + A A K+Q ++
Sbjct: 390 AAQKCLAAASPEAEGGGLKLDGRLLKIDLAVTRDEAAKLQTKKV 433
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35;
AltName: Full=Splicing factor, arginine/serine-rich
13B; AltName: Full=Splicing factor,
arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+V+++
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 DAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|260786062|ref|XP_002588078.1| hypothetical protein BRAFLDRAFT_114729 [Branchiostoma floridae]
gi|229273235|gb|EEN44089.1| hypothetical protein BRAFLDRAFT_114729 [Branchiostoma floridae]
Length = 478
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 87/191 (45%), Gaps = 28/191 (14%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PPD L V + T DDL +F ++G++ + RD++TGDS +AFV ++
Sbjct: 238 APPD----NVLFVCKLNPVTQDDDLEVIFSRFGEIKCCEVIRDQKTGDSLCYAFVEFEKP 293
Query: 68 DEAQKAVDRLDGRVVDGREITVQFA-------KYGPNAEKIQQGRIVESSSKSKGRSRS- 119
+ ++A ++D ++D R I V F+ K GPNA K Q E KSKG
Sbjct: 294 EACEEAYFKMDNVLIDDRRIHVDFSQSVSKVWKGGPNAPKGGQKSKFELKDKSKGAGTDV 353
Query: 120 ----------RSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDH----RRRSRS 165
+ R R + K +RR S S +R ++ KERD RR R
Sbjct: 354 DNCVLKLFSFQDTENRSRHDKHKKTHRRDSSSSEDDRRHHKKHHKKERDLDKTVERRVRD 413
Query: 166 RSASPD--RHK 174
S+S D RHK
Sbjct: 414 ASSSEDDRRHK 424
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur
garnettii]
Length = 172
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|220906552|ref|YP_002481863.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219863163|gb|ACL43502.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 101
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N+++ T DDL +F +YG V V +P DR TG RGFAFV + +E + A+D
Sbjct: 2 SIYIGNLSYTVTQDDLIQVFGEYGTVKSVHLPTDRETGRMRGFAFVEMENNNEEEAAIDA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|393906774|gb|EJD74392.1| hypothetical protein, variant [Loa loa]
Length = 324
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 59/93 (63%)
Query: 30 DDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITV 89
DDL LFE+ G V DV+IP D T +SRGFA+V++++ +A+ A+ +L+G + GR I V
Sbjct: 8 DDLRALFERMGPVRDVYIPLDYYTRESRGFAYVKFEFTRDAEDALRKLNGASILGRPIEV 67
Query: 90 QFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP 122
++A+ + + R SS + + R RSRSP
Sbjct: 68 EWAEGQRKTKTEMRARDSYSSYRVRNRYRSRSP 100
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|121713176|ref|XP_001274199.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119402352|gb|EAW12773.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 284
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDISEGDIVTIFSQYGEPVHVNLIRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V A+Y
Sbjct: 88 DLAVDNLGGATVLGRILRVDHARY 111
>gi|408366904|gb|AFU60545.1| transformer-2c [Fenneropenaeus chinensis]
Length = 260
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L + ++ TT L LF KYG + +V + D +TG SRGFAF+ + + D+A +A ++
Sbjct: 103 CLGIFGLSLYTTERQLHHLFGKYGHINEVQVVLDAKTGRSRGFAFIYFDHVDDATEAKEQ 162
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V F+
Sbjct: 163 CTGMEIDGRRIRVDFS 178
>gi|197128619|gb|ACH45117.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128620|gb|ACH45118.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128623|gb|ACH45121.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128625|gb|ACH45123.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128627|gb|ACH45125.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
gi|197128628|gb|ACH45126.1| putative cold inducible RNA binding protein variant 1
[Taeniopygia guttata]
Length = 171
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|225683370|gb|EEH21654.1| U2 snRNP component IST3 [Paracoccidioides brasiliensis Pb03]
Length = 280
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + ++ + + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
AVD L G + GR I V +Y E+ + + ++ G +SR
Sbjct: 84 QRSTDLAVDNLGGATILGRMIRVDHVRYKRKEEEGLEDNVAALATAETGEEKSR 137
>gi|417409216|gb|JAA51125.1| Putative translation initiation factor 3 subunit g eif-3g, partial
[Desmodus rotundus]
Length = 269
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 96 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 153
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSR 118
++ D++++A++R +G +DGR I V ++ + P I GR S G
Sbjct: 154 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP-GIYMGRPTHSGGGGGGGGG 212
Query: 119 SRSPRPRYRDEHRDKDYRR 137
R RD + D+ Y R
Sbjct: 213 GGGGGGRRRDSYYDRGYER 231
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 39 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 98
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 99 NGKSVDGRQIRV 110
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ F T D+ LF +GKV V + +DR T SRG AFV Y ++A KA
Sbjct: 58 TLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAARS 117
Query: 77 LDGRVVDGREITVQFA 92
+D ++++GR++TV A
Sbjct: 118 MDAKILNGRKLTVSIA 133
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|403370032|gb|EJY84876.1| RNA-binding protein [Oxytricha trifallax]
Length = 722
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 31 DLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG-RVVDGREITV 89
DL FEKYGK+++V + RD T +S+GFA+V Y+ + +AQ+A++ LDG RV + + V
Sbjct: 338 DLLKTFEKYGKILEVKVIRDHITKNSKGFAYVLYERSSDAQRAIEGLDGVRVYNEWMLKV 397
Query: 90 QFAK 93
+ AK
Sbjct: 398 ELAK 401
>gi|317150318|ref|XP_001823946.2| U2 snRNP component ist3 [Aspergillus oryzae RIB40]
Length = 221
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY--------GPNAEKIQQGRIVESS 110
AVD L G V GR + V +Y G N K+ +V+S+
Sbjct: 88 DLAVDNLGGSTVLGRILRVDHVRYKRRDDEEEGDNVAKLMGDAVVKSA 135
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + + F T D L F KYG++ +V + +DR T SRGF FV ++ D+A+
Sbjct: 1 MSDEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 61 DAMMAMNGKSVDGRQIRV 78
>gi|348519914|ref|XP_003447474.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 279
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 106 HIGNRANPD--PNCCLGVFGLSLYTTERDLRDVFSKYGPLEDVCIVYDQQSRRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 164 YFENTDDAKEAKERANGMELDGRRIRVDFS 193
>gi|330928415|ref|XP_003302251.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
gi|311322479|gb|EFQ89633.1| hypothetical protein PTT_14000 [Pyrenophora teres f. teres 0-1]
Length = 296
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V + + RDR TG SRGFA+++Y+
Sbjct: 28 DYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGFAWIKYEDQRSC 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGP 96
AVD L G + R I V A+Y P
Sbjct: 88 DLAVDNLGGANIMDRIIRVDHARYKP 113
>gi|408366902|gb|AFU60544.1| transformer-2b [Fenneropenaeus chinensis]
Length = 246
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L + ++ TT L LF KYG + +V + D +TG SRGFAF+ + + D+A +A ++
Sbjct: 103 CLGIFGLSLYTTERQLHHLFGKYGHINEVQVVLDAKTGRSRGFAFIYFDHVDDATEAKEQ 162
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V F+
Sbjct: 163 CTGMEIDGRRIRVDFS 178
>gi|123471459|ref|XP_001318929.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901700|gb|EAY06706.1| hypothetical protein TVAG_211580 [Trichomonas vaginalis G3]
Length = 220
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ + N+ F T L +F KYG+V+D IP + G SRG+ FV + ++AQKAVD
Sbjct: 30 SVHIGNLPFEYTEAKLKEIFGKYGEVLDSKIPTNP-AGRSRGYGFVSFALKEDAQKAVDE 88
Query: 77 LDGRVVDGREITVQFAK 93
L+ + ++GR++ V FAK
Sbjct: 89 LNNKEMEGRKVEVAFAK 105
>gi|393215487|gb|EJD00978.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 247
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ R+T DL F ++G+V V I D+R+ SRGF F++ ++A + + L
Sbjct: 36 LGVFGLSIRSTERDLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKLASVEDAARCIQEL 95
Query: 78 DGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDK 133
+G ++GR I V ++ + P + R ++ GR R R YR+ +R++
Sbjct: 96 NGVELNGRRIRVDYSVTERPHAPTPGEYMGHR------RNTGRDYDRRDRGPYRESYRER 149
Query: 134 DYRR----RSRSRSRERYDR-DRYRSKER 157
D RR R R RERYDR DRY K+R
Sbjct: 150 DIRRDYDERDRYYDRERYDRYDRYSDKDR 178
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + + + T L F +G++++V + +DR TG SRGF FV Y EAQKA++ +
Sbjct: 39 LFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAM 98
Query: 78 DGRVVDGREITVQFA 92
DGRV+DGR I V +A
Sbjct: 99 DGRVLDGRTIRVNYA 113
>gi|90076360|dbj|BAE87860.1| unnamed protein product [Macaca fascicularis]
Length = 207
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|452988237|gb|EME87992.1| hypothetical protein MYCFIDRAFT_192265 [Pseudocercospora fijiensis
CIRAD86]
Length = 310
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 2 SHFGKSGPP------DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGD 55
+ K PP D RDT + + + F + D+ +F +YG V + + RD+ TG
Sbjct: 13 TELDKCIPPNASWHTDYRDTAYVYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKDTGK 72
Query: 56 SRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKY 94
SRGF F++Y+ AVD L G V GR I+V +Y
Sbjct: 73 SRGFCFLKYEDQRSCDLAVDNLSGAGVMGRVISVDHTRY 111
>gi|226500552|ref|NP_001148723.1| ELAV-like protein 4 [Zea mays]
gi|195621654|gb|ACG32657.1| ELAV-like protein 4 [Zea mays]
Length = 127
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + RTT++ L F K+G+V++ + DR +G SRGF FV+Y EA +A++
Sbjct: 35 NLFVSGLNKRTTSEGLKEAFSKFGQVIEARVITDRISGYSRGFGFVKYATVQEAGEAIEG 94
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQG 104
+DG+ +DG I ++AK + QQG
Sbjct: 95 MDGKFLDGWVIFAEYAKQREATQPSQQG 122
>gi|408366900|gb|AFU60543.1| transformer-2a [Fenneropenaeus chinensis]
Length = 250
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L + ++ TT L LF KYG + +V + D +TG SRGFAF+ + + D+A +A ++
Sbjct: 103 CLGIFGLSLYTTERQLHHLFGKYGHINEVQVVLDAKTGRSRGFAFIYFDHVDDATEAKEQ 162
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V F+
Sbjct: 163 CTGMEIDGRRIRVDFS 178
>gi|440684571|ref|YP_007159366.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
gi|428681690|gb|AFZ60456.1| putative transcriptional regulator [Anabaena cylindrica PCC 7122]
Length = 604
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
SG D D + + N+ F DL LF ++G++ DV++P+DR TG SRGFA V ++
Sbjct: 516 SGSNDTSDYAKIFIGNVDFNADEQDLETLFSQFGEISDVYLPKDRMTGKSRGFAIVEFEQ 575
Query: 67 ADEAQKAVDRLDGRVVDGREITVQ 90
+ A+KA++ + + R++ VQ
Sbjct: 576 LESAKKALENTNPLFLRNRKLYVQ 599
>gi|406697498|gb|EKD00757.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1039
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +T L V N+ F TADD+ FEKYG +VDV +P TG+ G AFV ++ + A
Sbjct: 488 ILNTGRLFVRNLAFVATADDIKAHFEKYGPIVDVHMPVSHSTGEPLGTAFVLFRDPNNAL 547
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAEK------IQQGRIVESSSKSKGRSRSRSPRPR 125
A LD GR + V + P E I G+++ +++++G + R R
Sbjct: 548 SARQSLDKTTFQGRLLHVLPGRARPGQENASGVAGIIDGKVLGKATEARGEVKQRQDEKR 607
Query: 126 YRDEHRDKDY 135
D R ++
Sbjct: 608 KADSARGVNW 617
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRR---TG--DSRGFAFVRYKYADEAQK 72
LLV N+ F T D+ LF YG + + +PR TG +RGFAF+ + EAQ+
Sbjct: 913 LLVKNLPFEATKKDVRALFSAYGTLKSLRVPRKSTMSATGAQSTRGFAFLEFTTHAEAQR 972
Query: 73 AVDRLDGRVVDGREITVQFAK 93
A+D L + GR + ++AK
Sbjct: 973 AMDALKHTHLLGRHLVTEWAK 993
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 48 PRDRRTGD--SRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
P +R G S G+ FV +K EAQ A+ L+G +DG I +FA+ G
Sbjct: 842 PDPKRPGARLSMGYGFVGFKTKKEAQAALAGLEGFKIDGHAIEAKFAQRG 891
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|295663727|ref|XP_002792416.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279086|gb|EEH34652.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 308
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ A++A A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 133 LQGEVIEGRTLSIEKARRG 151
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 17 SLLVLNITFRTTAD--DLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
SL+V FR D ++ +F KYG V DV IPRD T RGFAF+ ++ ++A+ A+
Sbjct: 103 SLIVRG--FRDVVDRSEIQNIFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAEDAI 160
Query: 75 DRLDGRVVDGREITVQFAK 93
LDGR V G ++V AK
Sbjct: 161 SHLDGRSVCGSTVSVSIAK 179
>gi|239612039|gb|EEQ89026.1| U2 snRNP component IST3 [Ajellomyces dermatitidis ER-3]
Length = 258
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
S D RDT + + ++ + + D+ +F +YG+ V + + RD+ TG S+GFAF++
Sbjct: 1 MSSSWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLK 60
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPR 123
Y+ AVD L G V GR I V +Y E+ + + + G SR
Sbjct: 61 YEDQRSTDLAVDNLGGATVLGRMIRVDHVRYKRKEEEGLEDNVATLTVGETGLGESR--- 117
Query: 124 PRYRDEHRDKDYRRRSRSRS 143
RD++ ++ RRR+ S
Sbjct: 118 ---RDDNGEEGRRRRTTKHS 134
>gi|226287356|gb|EEH42869.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 305
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ A++A A +
Sbjct: 70 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 129
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 130 LQGEVIEGRTLSIEKARRG 148
>gi|448878336|gb|AGE46131.1| arginine/serine-rich splicing factor SCL28 transcript II [Sorghum
bicolor]
Length = 190
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 51/76 (67%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LL+ +I+ +D+ FE++G + DV++PR+ T + RGF FV+++Y ++A A +
Sbjct: 59 LLIRDISLTARPEDIRVPFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKQEM 118
Query: 78 DGRVVDGREITVQFAK 93
+ +V+ GREI++ +A+
Sbjct: 119 NHQVIGGREISIVYAE 134
>gi|224002947|ref|XP_002291145.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972921|gb|EED91252.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 324
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
GPP + SLLV N+ + DL F + G+V DV+IPRD + +GFAF+ Y
Sbjct: 185 GPPGV----SLLVRNVNGEISTQDLQMAFGRIGEVRDVYIPRDFHSQQPKGFAFIEYATP 240
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYR 127
++A++A D ++ ++ GREI V +A+ +GR+V+ R RP R
Sbjct: 241 EQAREARDEMNHFMMKGREIEVVYAQEKRKTPNEMRGRVVD----------GREVRPGER 290
Query: 128 DEHRDKDYRRRS 139
D++R S
Sbjct: 291 GGGGGGDFQRSS 302
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + + F T D L F KYG++ +V + +DR T SRGF FV ++ D+A+
Sbjct: 1 MSDEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 61 DAMMAMNGKSVDGRQIRV 78
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + N++F D+++ +F K+G++V V IP T +GF +V+Y D+A+KA+D
Sbjct: 289 TLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKALDA 348
Query: 77 LDGRVVDGREITVQFAKYGPN 97
L G +D R + + ++ PN
Sbjct: 349 LQGEYIDNRPVRLDYSTPRPN 369
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 36 FEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 95
F+ G VV + +R T SRG+ +V ++ A+KAV + G+ +DGR I +
Sbjct: 207 FDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEIDGRPINCDLSTSK 266
Query: 96 P 96
P
Sbjct: 267 P 267
>gi|296411281|ref|XP_002835362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629140|emb|CAZ79519.1| unnamed protein product [Tuber melanosporum]
Length = 322
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D DT + + + + + D+ +F ++G+ V V + RD+ TG S+GFAF++Y+
Sbjct: 28 DWSDTAYVYIGGLPYELSEGDIITIFSQFGEPVHVNLIRDKDTGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQ 103
AVD L G + GR I V +Y P ++++
Sbjct: 88 NLAVDNLGGATILGRIIRVDHTRYKPKEGELEE 120
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + +++ T L F KYG+VVD I DR TG SRGF F+ Y +EA A+ L
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 78 DGRVVDGREITVQFAK 93
DG+ + GR I V +A
Sbjct: 104 DGQDLHGRPIRVNYAN 119
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2;
Short=xCIRP2; AltName: Full=Glycine-rich RNA-binding
protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L + + F T + L +F KYG++ +V + +DR T SRGF FV ++ D+A+
Sbjct: 1 MSDEGKLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAK 60
Query: 72 KAVDRLDGRVVDGREITV 89
A+ ++G+ VDGR+I V
Sbjct: 61 DAMMAMNGKAVDGRQIRV 78
>gi|383763833|ref|YP_005442815.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381384101|dbj|BAM00918.1| putative RNA-binding region [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 105
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 16/119 (13%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
++ V N+++RTT D+L FE YG V I RDR +G S+GF FV EA A++
Sbjct: 1 MNIYVGNLSYRTTEDELRRTFEAYGAVSSASIIRDRESGQSKGFGFVEMPSDSEALAAIN 60
Query: 76 RLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKD 134
L+ + V GR + K+ Q R E S GR +SR PR D++RD++
Sbjct: 61 ALNDKEVGGRRL------------KVNQARPREESGPRGGRPQSR-PR---SDQNRDRN 103
>gi|225677904|gb|EEH16188.1| hypothetical protein PABG_06275 [Paracoccidioides brasiliensis
Pb03]
Length = 308
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ A++A A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 133 LQGEVIEGRTLSIEKARRG 151
>gi|156084456|ref|XP_001609711.1| RNA recognition motif containing protein [Babesia bovis]
gi|154796963|gb|EDO06143.1| RNA recognition motif containing protein [Babesia bovis]
Length = 253
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YS+L+ N+ + T A ++ FE +GK+ DV++P+D +G RGF FV + A A+
Sbjct: 9 YSVLIRNLKYSTRASEVREAFECFGKIRDVYLPQDYSSGMPRGFGFVEFVEEAAALDAIR 68
Query: 76 RLDGRVVDGREITVQFAK 93
++D +G+ IT A+
Sbjct: 69 KMDNTTFNGKVITCCEAQ 86
>gi|226504024|ref|NP_001140489.1| uncharacterized protein LOC100272550 [Zea mays]
gi|194699696|gb|ACF83932.1| unknown [Zea mays]
gi|448878232|gb|AGE46079.1| arginine/serine-rich splicing factor SCL28 transcript II [Zea mays]
Length = 188
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 50/77 (64%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
LL+ NI+ +D+ FE++G + DV++PR+ T + RGF FV+++Y ++A A
Sbjct: 58 GLLIRNISLTARPEDIRATFEQFGPIKDVYLPRNFHTRELRGFGFVKFRYPEDAAVAKRE 117
Query: 77 LDGRVVDGREITVQFAK 93
+ +V+ GREI++ +A+
Sbjct: 118 MHHQVIGGREISIVYAE 134
>gi|194385818|dbj|BAG65284.1| unnamed protein product [Homo sapiens]
Length = 263
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|403362029|gb|EJY80730.1| RNA-binding protein [Oxytricha trifallax]
Length = 762
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 31 DLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG-RVVDGREITV 89
DL FEKYGK+++V + RD T +S+GFA+V Y+ + +AQ+A++ LDG RV + + V
Sbjct: 403 DLLKTFEKYGKILEVKVIRDHITKNSKGFAYVLYERSSDAQRAIEGLDGVRVYNEWMLKV 462
Query: 90 QFAK 93
+ AK
Sbjct: 463 ELAK 466
>gi|443477523|ref|ZP_21067364.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
gi|443017338|gb|ELS31803.1| RNP-1 like RNA-binding protein [Pseudanabaena biceps PCC 7429]
Length = 111
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 43/77 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T D L P+FE YGKV V P DR TG +RGFAFV E A+
Sbjct: 2 SIYVGNLSYEVTQDHLKPVFEDYGKVTRVHFPTDRETGRARGFAFVEMSQDAEEDAAITA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR + V AK
Sbjct: 62 LDGAEWMGRVLKVNKAK 78
>gi|348564374|ref|XP_003467980.1| PREDICTED: transformer-2 protein homolog alpha-like [Cavia
porcellus]
Length = 393
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 113 HTGSRANPD--PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 170
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 171 YFERIDDSKEAMERANGMELDGRRIRVDYS 200
>gi|348510881|ref|XP_003442973.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 290
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 109 HIGNRANPDPNNC--LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFV 166
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +++++A +R +G +DGR I V F+
Sbjct: 167 YFENCEDSKEAKERANGMELDGRRIRVDFS 196
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T +DL F +YG +VDV+IP D + RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 DAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+ T+ L FE+YG+V+ + + TG S+GF FV++ A +A+ A+ +
Sbjct: 36 TIFVGNLNHETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAEDAIKQ 95
Query: 77 LDGRVVDGREITVQFAKYGPN 97
DG+ +DGR I FAKY P+
Sbjct: 96 ADGQTMDGRTIKCNFAKYQPH 116
>gi|115474735|ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|215767574|dbj|BAG99802.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + ++ RTT D L F K+G+V+ + DR TG S+GF FVRY ++A K ++
Sbjct: 37 NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGIEG 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++A+
Sbjct: 97 MDGKFLDGWVIFAEYAR 113
>gi|124801947|ref|XP_001347313.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23494891|gb|AAN35226.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 248
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%)
Query: 2 SHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF 61
+H P D +L V N++ + T L +FEKYG + ++ + T +SR F F
Sbjct: 6 AHSESEEPVHKNDGSTLYVSNLSSKITTAKLQDIFEKYGNIEKCYVISNPITKESRNFGF 65
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
V + +++A+ A+++ + ++GREI V+ AK
Sbjct: 66 VTFNNSEDAENAMNKANKMEIEGREINVEIAK 97
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 10 PDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
P T +L + N++F T D++ F +YG++V V P DR TG +GF +V Y +
Sbjct: 275 PQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVET 334
Query: 70 AQKAVDRLDGRVVDGREITVQFA 92
AQKAV+ L+G + GR + + +A
Sbjct: 335 AQKAVEGLNGVEIAGRSLRLDYA 357
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V N+++ + L F G V I D+ TG ++GF +V ++ AD A A
Sbjct: 184 TVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESAD-ALTAAMA 242
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGR 105
L G +DGREI V + P + +QGR
Sbjct: 243 LTGTELDGREIRVDVSTPKPPRDGNRQGR 271
>gi|85099136|ref|XP_960722.1| hypothetical protein NCU04164 [Neurospora crassa OR74A]
gi|28922241|gb|EAA31486.1| predicted protein [Neurospora crassa OR74A]
Length = 396
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ LFEKYG+V I +D TG+SRGF FV+ ++A A +
Sbjct: 75 NLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANAAKEG 134
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 135 LQGEVIEGRTLSIEMAR 151
>gi|449273022|gb|EMC82651.1| Cold-inducible RNA-binding protein [Columba livia]
Length = 153
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|428166035|gb|EKX35018.1| translation initiation factor 3, subunit G [Guillardia theta
CCMP2712]
Length = 351
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 52/86 (60%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
G P + +L V N++ T +D+ LF+++G + V +P DR TG+ RGFAF+ +
Sbjct: 188 GGPQEEEKATLRVTNVSTDATREDMHELFKQFGPIARVSVPTDRATGEGRGFAFIDFYNR 247
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
++AQ+A++ L+G D + V +A+
Sbjct: 248 EDAQRAINALNGTGFDSLILNVDWAR 273
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L V I F T L +F KYG V +V + R+R T S+GF FV ++ D+A+
Sbjct: 1 MSDEGKLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDAR 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+ ++G+ VDGR+I V A
Sbjct: 61 DALAGMNGKTVDGRQIRVDHA 81
>gi|67536990|ref|XP_662269.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|40741517|gb|EAA60707.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4]
gi|259482500|tpe|CBF77042.1| TPA: hypothetical protein ANIA_04665 [Aspergillus nidulans FGSC A4]
Length = 279
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEH 130
AVD L G V GR + V +Y E + + ++ G+ D
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHTRYKKRDEDEDTNNVAKLLGETAGKE---------ADGD 138
Query: 131 RDKDYRRRSRSRSRER 146
D + RRR R S ER
Sbjct: 139 TDDEGRRRKRGHSGER 154
>gi|388579351|gb|EIM19676.1| translation initiation factor 3, RNA-binding subunit [Wallemia sebi
CBS 633.66]
Length = 288
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 2 SHFGKSGPPDIRDTYSLL-VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
S G GP RD Y L V N++ T DDL LF ++G+V VFI RDR T S+GFA
Sbjct: 194 SGAGPGGPS--RDEYPTLRVTNVSEDTHEDDLRELFRRFGRVQRVFIGRDRETRASKGFA 251
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
FV ++ +A+KA+++++G D ++VQ+++
Sbjct: 252 FVSFELRSDAEKALEKVNGMGYDNLILSVQWSQ 284
>gi|315044427|ref|XP_003171589.1| RNA recognition domain-containing protein family protein
[Arthroderma gypseum CBS 118893]
gi|311343932|gb|EFR03135.1| RNA recognition domain-containing protein family protein
[Arthroderma gypseum CBS 118893]
Length = 305
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R + D+ LFEKYG+V + I D T +SRGF FV D+A+ A +
Sbjct: 68 NLFVTGIHPRLSEADVTRLFEKYGEVENCSIMLDPHTKESRGFGFVNMVTPDQAEAAREG 127
Query: 77 LDGRVVDGREITVQFAK 93
L G V+DGR ++++ A+
Sbjct: 128 LQGEVIDGRTLSIEKAR 144
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 2 SHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF 61
S GKS D+ + V + + T D+ +F +YG++V++ + RD++TG +GFAF
Sbjct: 21 SGSGKSWHDQYSDSAWVFVGGLPYELTEGDVLCVFSQYGEIVNINMVRDKKTGKPKGFAF 80
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITV 89
+ Y+ AVD +G + GR I V
Sbjct: 81 ICYENQKSTVLAVDNFNGVKIKGRTIRV 108
>gi|189191842|ref|XP_001932260.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973866|gb|EDU41365.1| U2 snRNP component IST3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 296
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V + + RDR TG SRGFA+++Y+
Sbjct: 28 DYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDRETGKSRGFAWIKYEDQRSC 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGP 96
AVD L G + R I V A+Y P
Sbjct: 88 DLAVDNLGGANIMDRIIRVDHARYKP 113
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V NI ++DL F +YG +VDV++P D RGFA+V+++ +A+ A+
Sbjct: 11 SLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFEDVRDAEDALHN 70
Query: 77 LDGRVVDGREITVQFAK---YGPNAEKIQQGRIVESSSK 112
LD + + GR+I +QFA+ P+ K ++G SS+
Sbjct: 71 LDKKWICGRQIEIQFAQGDRKTPHQMKAKEGSSTYGSSR 109
>gi|355725835|gb|AES08679.1| transformer 2 alpha-like protein [Mustela putorius furo]
Length = 267
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 95 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 152
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSR 118
++ D++++A++R +G +DGR I V ++ + P I GR S G
Sbjct: 153 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP-GIYMGRPTHSGGGGGGGGG 211
Query: 119 SRSPRPRYRDEHRDKDYRR 137
R RD + D+ Y R
Sbjct: 212 GGGGGGRRRDSYYDRGYDR 230
>gi|114052084|ref|NP_001039845.1| transformer-2 protein homolog alpha [Bos taurus]
gi|345780251|ref|XP_539475.3| PREDICTED: transformer-2 protein homolog alpha isoform 1 [Canis
lupus familiaris]
gi|410952462|ref|XP_003982899.1| PREDICTED: transformer-2 protein homolog alpha [Felis catus]
gi|86821769|gb|AAI05490.1| Transformer 2 alpha homolog (Drosophila) [Bos taurus]
gi|296488601|tpg|DAA30714.1| TPA: transformer-2 alpha [Bos taurus]
Length = 281
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSR 118
++ D++++A++R +G +DGR I V ++ + P I GR S G
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP-GIYMGRPTHSGGGGGGGGG 224
Query: 119 SRSPRPRYRDEHRDKDYRR 137
R RD + D+ Y R
Sbjct: 225 GGGGGGRRRDSYYDRGYDR 243
>gi|301771922|ref|XP_002921381.1| PREDICTED: hypothetical protein LOC100480496 [Ailuropoda
melanoleuca]
Length = 281
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSR 118
++ D++++A++R +G +DGR I V ++ + P I GR S G
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP-GIYMGRPTHSGGGGGGGGG 224
Query: 119 SRSPRPRYRDEHRDKDYRR 137
R RD + D+ Y R
Sbjct: 225 GGGGGGRRRDSYYDRGYDR 243
>gi|116175271|ref|NP_001070691.1| transformer-2 protein homolog alpha [Sus scrofa]
gi|115371739|gb|ABI96194.1| TRA2A [Sus scrofa]
Length = 279
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSR 118
++ D++++A++R +G +DGR I V ++ + P I GR S G
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP-GIYMGRPTHSGGGGGGGGG 224
Query: 119 SRSPRPRYRDEHRDKDYRR 137
R RD + D+ Y R
Sbjct: 225 GGGGGGRRRDSYYDRGYDR 243
>gi|57530708|ref|NP_001006360.1| transformer-2 protein homolog alpha [Gallus gallus]
gi|53127932|emb|CAG31257.1| hypothetical protein RCJMB04_4g4 [Gallus gallus]
Length = 277
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 110 HTGSRANPDPNTC--LGVFGLSLYTTERDLCEVFSRYGPLTGVNVVYDQRTGRSRGFAFV 167
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++ +G +DGR I V ++
Sbjct: 168 YFERIDDSKEAMEHANGMELDGRRIRVDYS 197
>gi|406859423|gb|EKD12489.1| RNA binding domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 304
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F ++G+ + + RD+ TG S+GFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFELSEGDVVTIFSQFGEPTYINLIRDKETGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQG 104
AVD L G V+ GR + V +Y ++ ++G
Sbjct: 88 DLAVDNLGGTVIMGRTLKVDHTRYKKKDDEKEEG 121
>gi|348522786|ref|XP_003448905.1| PREDICTED: transformer-2 protein homolog alpha-like [Oreochromis
niloticus]
Length = 279
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPD--PSTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +++++A++R +G +DGR I V ++
Sbjct: 166 YFERLEDSKEAMERANGMELDGRRIRVDYS 195
>gi|327352804|gb|EGE81661.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 278
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + ++ + + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRY 126
AVD L G V GR I V +Y E+ + + + G SR
Sbjct: 84 QRSTDLAVDNLGGATVLGRMIRVDHVRYKRKEEEGLEDNVATLTVGETGLGESR------ 137
Query: 127 RDEHRDKDYRRRSRSRS 143
RD++ ++ RRR+ S
Sbjct: 138 RDDNGEEGRRRRTTKHS 154
>gi|440901501|gb|ELR52432.1| Transformer-2 protein-like protein alpha, partial [Bos grunniens
mutus]
Length = 281
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSR 118
++ D++++A++R +G +DGR I V ++ + P I GR S G
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTP-GIYMGRPTHSGGGGGGGGG 224
Query: 119 SRSPRPRYRDEHRDKDYRR 137
R RD + D+ Y R
Sbjct: 225 GGGGGGRRRDSYYDRGYDR 243
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|218200448|gb|EEC82875.1| hypothetical protein OsI_27755 [Oryza sativa Indica Group]
Length = 141
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + ++ RTT D L F K+G+V+ + DR TG S+GF F+RY ++A K ++
Sbjct: 37 NLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFIRYATVEDAAKGIEG 96
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++A+
Sbjct: 97 MDGKFLDGWVIFAEYAR 113
>gi|283837905|ref|NP_001082402.1| splicing factor, arginine/serine-rich 10 [Xenopus laevis]
gi|83318282|gb|AAI08874.1| LOC398448 protein [Xenopus laevis]
Length = 298
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGF+FV
Sbjct: 111 HIGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPLSDVSIVYDQQSRRSRGFSFV 168
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR + V F+
Sbjct: 169 YFENVDDAKEAKERANGMELDGRRLRVDFS 198
>gi|354485618|ref|XP_003504980.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cricetulus
griseus]
Length = 172
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
+L FR+ +DL F +YG +VDV++P D T RGFA+V+++ +A+ A+ LD
Sbjct: 5 ILEACFRS--EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDR 62
Query: 80 RVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+ + GR+I +QFA+ PN K ++GR V
Sbjct: 63 KWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 93
>gi|196009950|ref|XP_002114840.1| hypothetical protein TRIADDRAFT_58742 [Trichoplax adhaerens]
gi|190582902|gb|EDV22974.1| hypothetical protein TRIADDRAFT_58742 [Trichoplax adhaerens]
Length = 463
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 82/166 (49%), Gaps = 6/166 (3%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + + T+++DL +F ++G ++ + RD++TGDS +AF+ Y+ D +KA ++
Sbjct: 234 LFICKLNPVTSSEDLEIIFSRFGTILSCEVIRDQKTGDSLCYAFIEYENVDNCEKAYFKM 293
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRR 137
D ++D R I V F++ + K++ ++ K ++++ E + D+
Sbjct: 294 DNVLIDDRRIHVDFSQ---SVAKMKWDMFKKAKETKKQTNQTKLQLKDKYVEKNEYDFVF 350
Query: 138 RSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDE 183
S R S++ H+++ + R +SP + H KYD+
Sbjct: 351 DDEEDSGNRRQYQESSSRKHSHQQKHKHRDSSP---RQHSSSKYDQ 393
>gi|294942803|ref|XP_002783687.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239896223|gb|EER15483.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 691
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D +S+ V I R DDL F K+G++ DVFIP DR TG SRGF FVR+ +A+
Sbjct: 507 LNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAE 566
Query: 72 KAVDRLDGRVVDGREITVQFAKY 94
A+ +D + G ITV A Y
Sbjct: 567 DAIRDMDNKEFQGNRITVAAAMY 589
>gi|395540434|ref|XP_003772160.1| PREDICTED: transformer-2 protein homolog alpha [Sarcophilus
harrisii]
Length = 272
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 98 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 155
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 156 YFERIDDSKEAMERANGMELDGRRIRVDYS 185
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 83/171 (48%), Gaps = 31/171 (18%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V + ++ DL FE+YGKV D++IP+ G RGFA+V++ ++A+ A+++
Sbjct: 5 SIYVRGVPPDASSSDLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEK 64
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR---------------- 120
+ V+ G+ + V++A E+ + + +S GR RS
Sbjct: 65 IPSIVILGQTLNVEWA----TGERKTSNDMRRADDRS-GRYRSNRYHYDDDDYYSSHRRD 119
Query: 121 --------SPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRS 163
S R RYRD RD+ YR SR R R+ RDRYR RD R S
Sbjct: 120 GGRDRYRDSSRDRYRDSSRDR-YRDSSRDRYRDS-SRDRYRDSSRDRYRNS 168
>gi|291394539|ref|XP_002713870.1| PREDICTED: transformer-2 alpha [Oryctolagus cuniculus]
Length = 330
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 156 HTGSRANPD--PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 213
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 214 YFERIDDSKEAMERANGMELDGRRIRVDYS 243
>gi|119479609|ref|XP_001259833.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
gi|119407987|gb|EAW17936.1| RNA binding domain protein [Neosartorya fischeri NRRL 181]
Length = 294
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPVHVDLIRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V A+Y
Sbjct: 88 DLAVDNLTGATVLGRVLRVDHARY 111
>gi|255949586|ref|XP_002565560.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592577|emb|CAP98933.1| Pc22g16450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 279
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG S+GFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDLSEGDIITIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V A+Y
Sbjct: 88 DLAVDNLGGATVMGRLLRVDHARY 111
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis thaliana]
Length = 262
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI ++L FE++G V DV+IPRD +G RGFAFV + A +A +A +
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP 122
+ R GREITV A + R + K R+RSR P
Sbjct: 109 NRRSFSGREITVVVA---------SESRKRPEEMRVKTRTRSREP 144
>gi|356536248|ref|XP_003536651.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Glycine max]
Length = 191
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DL F K GKVVD + +D T +SRGF FV + D+A+ +
Sbjct: 47 NLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMETNDDAECCIKY 106
Query: 77 LDGRVVDGREITVQFAK 93
L+ V +GR ITV+ AK
Sbjct: 107 LNRSVFEGRLITVEKAK 123
>gi|195972819|ref|NP_001124409.1| transformer-2 protein homolog alpha [Ovis aries]
gi|193245518|gb|ACF16977.1| TRA2A [Ovis aries]
Length = 281
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|51701959|sp|Q6PFR5.1|TRA2A_MOUSE RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2
alpha; Short=TRA2-alpha; AltName: Full=Transformer-2
protein homolog A
gi|34785414|gb|AAH57448.1| Transformer 2 alpha homolog (Drosophila) [Mus musculus]
Length = 281
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 164 YFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|384946690|gb|AFI36950.1| transformer-2 protein homolog alpha [Macaca mulatta]
Length = 280
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|355560756|gb|EHH17442.1| Transformer-2 protein-like protein alpha, partial [Macaca mulatta]
gi|355747772|gb|EHH52269.1| Transformer-2 protein-like protein alpha, partial [Macaca
fascicularis]
Length = 279
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|111160869|ref|NP_932770.2| transformer-2 protein homolog alpha [Mus musculus]
gi|171846642|gb|AAI61978.1| Tra2a protein [Rattus norvegicus]
Length = 282
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 164 YFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|9558733|ref|NP_037425.1| transformer-2 protein homolog alpha [Homo sapiens]
gi|281182542|ref|NP_001162359.1| transformer-2 protein homolog alpha [Papio anubis]
gi|384475793|ref|NP_001245042.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|114612370|ref|XP_001158245.1| PREDICTED: transformer-2 protein homolog alpha-like isoform 3 [Pan
troglodytes]
gi|297680857|ref|XP_002818189.1| PREDICTED: transformer-2 protein homolog alpha-like [Pongo abelii]
gi|332242557|ref|XP_003270451.1| PREDICTED: transformer-2 protein homolog alpha [Nomascus
leucogenys]
gi|403287930|ref|XP_003935172.1| PREDICTED: transformer-2 protein homolog alpha [Saimiri boliviensis
boliviensis]
gi|426355642|ref|XP_004045221.1| PREDICTED: transformer-2 protein homolog alpha-like [Gorilla
gorilla gorilla]
gi|4033480|sp|Q13595.1|TRA2A_HUMAN RecName: Full=Transformer-2 protein homolog alpha; Short=TRA-2
alpha; Short=TRA2-alpha; AltName: Full=Transformer-2
protein homolog A
gi|1256837|gb|AAC50658.1| transformer-2 alpha [Homo sapiens]
gi|16877711|gb|AAH17094.1| Transformer 2 alpha homolog (Drosophila) [Homo sapiens]
gi|31455551|dbj|BAC77401.1| putative MAPK activating protein [Homo sapiens]
gi|37674420|gb|AAQ96870.1| unknown [Homo sapiens]
gi|119614194|gb|EAW93788.1| transformer-2 alpha, isoform CRA_a [Homo sapiens]
gi|123983254|gb|ABM83368.1| transformer-2 alpha [synthetic construct]
gi|123997955|gb|ABM86579.1| transformer-2 alpha [synthetic construct]
gi|160904205|gb|ABX52190.1| transformer-2 alpha (predicted) [Papio anubis]
gi|189054556|dbj|BAG37329.1| unnamed protein product [Homo sapiens]
gi|261860348|dbj|BAI46696.1| transformer 2 alpha homolog [synthetic construct]
gi|351705767|gb|EHB08686.1| Transformer-2 protein-like protein alpha [Heterocephalus glaber]
gi|383417837|gb|AFH32132.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|384946688|gb|AFI36949.1| transformer-2 protein homolog alpha [Macaca mulatta]
gi|410214134|gb|JAA04286.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410214136|gb|JAA04287.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410249156|gb|JAA12545.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410249158|gb|JAA12546.1| transformer 2 alpha homolog [Pan troglodytes]
gi|410300572|gb|JAA28886.1| transformer 2 alpha homolog [Pan troglodytes]
Length = 282
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|451853478|gb|EMD66772.1| hypothetical protein COCSADRAFT_138790 [Cochliobolus sativus
ND90Pr]
Length = 318
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V + + RD+ TG SRGFA+++Y+
Sbjct: 28 DYRDTAFIYIGGLPFELSEGDIITIFSQYGEPVWIKLARDKETGKSRGFAWIKYEDQRSC 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGP 96
AVD L G + R I V +Y P
Sbjct: 88 DLAVDNLGGASIMDRIIRVDHTRYKP 113
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++FRTT D L FE++GK++ + + D+ RGFAF+RY+ +EA KA+ +
Sbjct: 79 LYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQGM 138
Query: 78 DGRVVDGREITVQFAK 93
G+ +DGR I V+ AK
Sbjct: 139 HGKFLDGRVIFVEEAK 154
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D R Y++++ N+++ T+ D + KYG +V V IP D R G SRG+ FV + + A
Sbjct: 46 DARAAYTVMLRNLSYNTSDDSIKEKLSKYGSIVRVNIPTDER-GRSRGYGFVEFDEVEAA 104
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
QK VD L +DGRE+ +Q +K
Sbjct: 105 QKVVD-LKAMEMDGREVQLQQSK 126
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T + V N+ D+ LFE G++ +V +P+D+ T +GFAFV+++ + + A+
Sbjct: 135 TTQVFVGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAAL 194
Query: 75 DRLDGRVVDGREITV 89
++ DG G I V
Sbjct: 195 EK-DGSEFKGVSIRV 208
>gi|294921861|ref|XP_002778742.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239887462|gb|EER10537.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 840
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D +S+ V I R DDL F K+G++ DVFIP DR TG SRGF FVR+ +A+
Sbjct: 749 LNDLFSVKVDGIDERVRKDDLREAFSKFGEIGDVFIPVDRYTGVSRGFGFVRFYERRDAE 808
Query: 72 KAVDRLDGRVVDGREITVQFAKYG 95
A+ +D + G ITV A Y
Sbjct: 809 DAIRDMDNKEFQGNRITVAAAMYN 832
>gi|344270299|ref|XP_003406983.1| PREDICTED: transformer-2 protein homolog alpha-like [Loxodonta
africana]
Length = 282
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|148666184|gb|EDK98600.1| RIKEN cDNA G430041M01, isoform CRA_a [Mus musculus]
Length = 281
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 164 YFERIDDSKEAMERANGMELDGRRIRVDYS 193
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ D+ + + N+++ T +DL +F KYGK+ ++ IP + + S G AF+ Y + A
Sbjct: 338 DVGDSGRIFIRNLSYTTKEEDLEKVFSKYGKISEIHIPINYESKQSIGIAFILYLIPENA 397
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRS 121
A++ +DG+V GR I V AK P + G SS KS+ +S
Sbjct: 398 VTALNEMDGKVFQGRIIHVLPAKQAPAKTPVLDGASAGSSYKSEKEKEQKS 448
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+ + +++ N+ F +T ++ LF YG++ V IP+ + G RGF FV + +EA+
Sbjct: 777 KPSSKIIIKNLPFESTTKEIRKLFAAYGEIQSVRIPK-KPNGGHRGFGFVEFLTEEEAKN 835
Query: 73 AVDRLDGRVVDGREITVQFAKYGPNAEKIQQ 103
A++ L GR + +Q+A+ N +++++
Sbjct: 836 AMEALGSSHFYGRHLVLQYAEQDKNVDELRE 866
>gi|148666185|gb|EDK98601.1| RIKEN cDNA G430041M01, isoform CRA_b [Mus musculus]
Length = 270
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 94 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 151
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 152 YFERIDDSKEAMERANGMELDGRRIRVDYS 181
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 123
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T ++DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 7 PPNT----SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
+A+ A+ LD + + GR+I +QFA+ PN K ++GR V
Sbjct: 63 DAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKDKEGRNV 104
>gi|354490714|ref|XP_003507501.1| PREDICTED: transformer-2 protein homolog alpha-like [Cricetulus
griseus]
Length = 283
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 107 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 164
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 165 YFERIDDSKEAMERANGMELDGRRIRVDYS 194
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 96 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 153
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 154 YFENVDDAKEAKERANGMELDGRRIRVDFS 183
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
gi|20466366|gb|AAM20500.1| putative RNA binding protein [Arabidopsis thaliana]
gi|21554261|gb|AAM63336.1| putative RNA binding protein [Arabidopsis thaliana]
gi|22136316|gb|AAM91236.1| putative RNA binding protein [Arabidopsis thaliana]
gi|332645866|gb|AEE79387.1| SC35-like splicing factor 30 [Arabidopsis thaliana]
Length = 262
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI ++L FE++G V DV+IPRD +G RGFAFV + A +A +A +
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSP 122
+ R GREITV A + R + K R+RSR P
Sbjct: 109 NRRSFAGREITVVVA---------SESRKRPEEMRVKTRTRSREP 144
>gi|27881815|gb|AAH44695.1| LOC398448 protein, partial [Xenopus laevis]
Length = 306
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGF+FV
Sbjct: 119 HIGNRANPDP--NCCLGVFGLSLYTTERDLREVFSKYGPLSDVSIVYDQQSRRSRGFSFV 176
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR + V F+
Sbjct: 177 YFENVDDAKEAKERANGMELDGRRLRVDFS 206
>gi|307166099|gb|EFN60351.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Camponotus floridanus]
Length = 490
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 86/181 (47%), Gaps = 26/181 (14%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK++ + RD +TGDS +AF+ + + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDHQTGDSLQYAFIEFADRKSCEDAYFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDE---HRDKD 134
D ++D R I V F S S +K R R + RY DE RD
Sbjct: 302 DNVLIDDRRIHVDF-----------------SQSVAKMRWRGKGKGIRYFDEDDKKRDNY 344
Query: 135 YRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYER 194
+ SRER + D + +E D +R+ SR H+ + R K D+++R RSY+R
Sbjct: 345 SFLKKPETSRER-NNDNGKDRE-DGKRKESSRKD----HRKYERRKEDKDKRKEDRSYDR 398
Query: 195 Y 195
Y
Sbjct: 399 Y 399
>gi|291400295|ref|XP_002716399.1| PREDICTED: splicing factor, arginine/serine-rich 10 [Oryctolagus
cuniculus]
Length = 240
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT DL +F KYG + DV I D+++ SRGFAFV ++ D+A++A +R
Sbjct: 71 CLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 130
Query: 77 LDGRVVDGREITVQFA 92
+G +DGR I V F+
Sbjct: 131 ANGMELDGRRIRVDFS 146
>gi|351710148|gb|EHB13067.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 271
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 91 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 148
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSK 112
++ D+A++A + +G DGR I V F+ + P I GR+ +SS+
Sbjct: 149 YFENVDDAKEAKECANGMEPDGRRIRVGFSITKRPHTPTP-GIYMGRLTYASSR 201
>gi|148666187|gb|EDK98603.1| RIKEN cDNA G430041M01, isoform CRA_d [Mus musculus]
Length = 302
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 126 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 183
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 184 YFERIDDSKEAMERANGMELDGRRIRVDYS 213
>gi|148666186|gb|EDK98602.1| RIKEN cDNA G430041M01, isoform CRA_c [Mus musculus]
Length = 300
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 126 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 183
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 184 YFERIDDSKEAMERANGMELDGRRIRVDYS 213
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T + V N+++ TT D L F YG+VVD + RDR TG SRGF FV + EA A+
Sbjct: 2 TAKVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAI 61
Query: 75 DRLDGRVVDGREITVQFAKYGP 96
L+ + +GR I V FA P
Sbjct: 62 SALNEQEFEGRRIKVNFANARP 83
>gi|307106841|gb|EFN55086.1| hypothetical protein CHLNCDRAFT_24218 [Chlorella variabilis]
Length = 91
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
RD S+ V N++ T DDL LF +G + +F+ +DR TG+SRGFAF+ + + ++A +
Sbjct: 5 RDENSVRVSNLSEDVTEDDLADLFGPFGPIQRIFVAKDRETGESRGFAFINFIHREDALR 64
Query: 73 AVDRLDGRVVDGREITVQFAKYGP 96
A+ +LDG D ++V A P
Sbjct: 65 AISKLDGFGYDNLILSVSMAAPRP 88
>gi|336373895|gb|EGO02233.1| hypothetical protein SERLA73DRAFT_178081 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386805|gb|EGO27951.1| hypothetical protein SERLADRAFT_462274 [Serpula lacrymans var.
lacrymans S7.9]
Length = 310
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + F T D+ +F +YG+V+DV +PRD+ TG +RGF F+ Y+
Sbjct: 28 KDSAYIFIGGLNFELTEGDVIAIFSQYGEVMDVNLPRDKNTGKTRGFGFLMYEDQRSTVL 87
Query: 73 AVDRLDGRVVDGREITVQFAK 93
AVD L+G V + + V K
Sbjct: 88 AVDNLNGAKVLEKTLRVDHVK 108
>gi|425774283|gb|EKV12592.1| hypothetical protein PDIP_51790 [Penicillium digitatum Pd1]
gi|425776284|gb|EKV14506.1| hypothetical protein PDIG_32200 [Penicillium digitatum PHI26]
Length = 281
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG S+GFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDLSEGDVIAIFSQYGEPVHVNLVRDKETGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V A+Y
Sbjct: 88 DLAVDNLGGATVMGRLLRVDHARY 111
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 103 HIGNRANPDPNNC--LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFV 160
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++++++A + +G +DGR I V F+
Sbjct: 161 YFETSEDSKEAKEHANGMELDGRRIRVDFS 190
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+V+++
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 GAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|238482369|ref|XP_002372423.1| transformer-SR ribonucleoprotein, putative [Aspergillus flavus
NRRL3357]
gi|317139223|ref|XP_003189145.1| transformer-SR ribonucleoprotein [Aspergillus oryzae RIB40]
gi|317139225|ref|XP_001817354.2| transformer-SR ribonucleoprotein [Aspergillus oryzae RIB40]
gi|220700473|gb|EED56811.1| transformer-SR ribonucleoprotein, putative [Aspergillus flavus
NRRL3357]
gi|391864654|gb|EIT73949.1| hypothetical protein Ao3042_10100 [Aspergillus oryzae 3.042]
Length = 308
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V I D T +SRGF FV+ A++A A +
Sbjct: 69 NLFVTGIHPRLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 128
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 129 LQGEVIEGRTLSIEKAR 145
>gi|345329358|ref|XP_001513669.2| PREDICTED: transformer-2 protein homolog alpha-like
[Ornithorhynchus anatinus]
Length = 284
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 110 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 167
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 168 YFERIDDSKEAMERANGMELDGRRIRVDYS 197
>gi|154280022|ref|XP_001540824.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412767|gb|EDN08154.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 311
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V I D T +SRGF FV+ A++A A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 133 LQGEVIEGRTLSIEKARRG 151
>gi|240279660|gb|EER43165.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325092793|gb|EGC46103.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 315
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V I D T +SRGF FV+ A++A A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 133 LQGEVIEGRTLSIEKARRG 151
>gi|225562846|gb|EEH11125.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 319
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V I D T +SRGF FV+ A++A A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 133 LQGEVIEGRTLSIEKARRG 151
>gi|213515188|ref|NP_001133716.1| transformer-2 protein homolog beta [Salmo salar]
gi|209155068|gb|ACI33766.1| Splicing factor, arginine/serine-rich 10 [Salmo salar]
Length = 302
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 109 HIGNRANPD--PNCCLGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFV 166
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++A A +R +G +DGR I V F+
Sbjct: 167 YFEVREDANGAKERANGMELDGRRIRVDFS 196
>gi|326327708|pdb|2KXN|B Chain B, Nmr Structure Of Human Tra2beta1 Rrm In Complex With
Aagaac Rna
Length = 129
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 36 HVGNRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFV 93
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++A +R +G +DGR I V F+
Sbjct: 94 YFENVDDAKEAKERANGMELDGRRIRVDFS 123
>gi|129562659|gb|ABO31095.1| tsunagi [Schistosoma japonicum]
Length = 176
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
KSGP + + L V N+ T +D+ F +YG + ++ + DRRTG +G+A V Y+
Sbjct: 60 KSGPQRSVEGWILFVRNVQEEATEEDIRDKFCEYGDIKNIHLNLDRRTGYLKGYALVEYE 119
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFA-KYGPNAEKI 101
EA A+++L+G ++G+ I V +A GPN KI
Sbjct: 120 NFKEAHTAMEQLNGSELNGQRIHVDWAFTKGPNPVKI 156
>gi|357144628|ref|XP_003573359.1| PREDICTED: nucleolin-like [Brachypodium distachyon]
Length = 153
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ RTT D L F K+G+V+ + DR TG S+GF FVRY ++A K ++
Sbjct: 49 NLFVSGLSKRTTTDGLREAFAKFGEVMHARVVTDRVTGFSKGFGFVRYASVEDASKGIEG 108
Query: 77 LDGRVVDGREITVQFAK 93
+DG+ +DG I ++A+
Sbjct: 109 MDGKFLDGWVIFAEYAR 125
>gi|397472988|ref|XP_003808009.1| PREDICTED: transformer-2 protein homolog alpha [Pan paniscus]
Length = 297
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMERANGMELDGRRIRVDYS 195
>gi|126663185|ref|ZP_01734183.1| RNA binding protein [Flavobacteria bacterium BAL38]
gi|126624843|gb|EAZ95533.1| RNA binding protein [Flavobacteria bacterium BAL38]
Length = 111
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V ++ F DL FE+YG V V I D+ TG S+GF FV EAQKA+D
Sbjct: 2 NIFVGSLPFSVEEADLRGYFEEYGAVESVKIISDKFTGRSKGFGFVEMANDAEAQKAIDE 61
Query: 77 LDGRVVDGREITVQFAKYGPNAEK 100
L+G ++GR+I V ++ P E+
Sbjct: 62 LNGGTIEGRKIVVNKSEPKPEGER 85
>gi|83765209|dbj|BAE55352.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 311
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V I D T +SRGF FV+ A++A A +
Sbjct: 69 NLFVTGIHPRLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 128
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 129 LQGEVIEGRTLSIEKAR 145
>gi|334349137|ref|XP_001369711.2| PREDICTED: transformer-2 protein homolog alpha-like [Monodelphis
domestica]
Length = 418
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 149 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 206
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 207 YFERIDDSKEAMERANGMELDGRRIRVDYS 236
>gi|253760757|ref|XP_002489004.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
gi|241947359|gb|EES20504.1| hypothetical protein SORBIDRAFT_0514s002010 [Sorghum bicolor]
Length = 208
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI A++L FE++G V DV+IP+D +G+ RGFAFV + +A +A
Sbjct: 92 SLLVRNIPLSVRAEELRVPFERFGPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYH 151
Query: 77 LDGRVVDGREITVQFAK 93
++ +V GREI V A
Sbjct: 152 MNRQVFFGREIAVVLAA 168
>gi|326921889|ref|XP_003207186.1| PREDICTED: transformer-2 protein homolog alpha-like [Meleagris
gallopavo]
Length = 277
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 110 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 167
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++ +G +DGR I V ++
Sbjct: 168 YFERIDDSKEAMEHANGMELDGRRIRVDYS 197
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL + NI+ + +DL F +YG VVDV+IP D + RGFA+++++
Sbjct: 7 PPNT----SLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ LD + V GR+I +QFA+
Sbjct: 63 DAEDALHNLDRKWVCGRQIEIQFAQ 87
>gi|261202032|ref|XP_002628230.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590327|gb|EEQ72908.1| RNA binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 258
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + ++ + + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAYIYIGSLPYDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
AVD L G V GR I V +Y E+ + + + G SR
Sbjct: 84 QRSTDLAVDNLGGATVLGRMIRVDHVRYKRKEEEGLEDNVATLTVGETGLGESR 137
>gi|358377462|gb|EHK15146.1| hypothetical protein TRIVIDRAFT_185271 [Trichoderma virens Gv29-8]
Length = 347
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +L V I R + ++ +FEKYG+V I RD T +SRGF FV+ +++A+
Sbjct: 70 INPGSNLFVTGIHPRLSEAEVSKMFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSEQAE 129
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A + L G V++GR ++++ A+
Sbjct: 130 AAKEGLQGEVIEGRTMSIEKAR 151
>gi|145237470|ref|XP_001391382.1| transformer-SR ribonucleoprotein [Aspergillus niger CBS 513.88]
gi|134075854|emb|CAL00233.1| unnamed protein product [Aspergillus niger]
gi|350635498|gb|EHA23859.1| hypothetical protein ASPNIDRAFT_200274 [Aspergillus niger ATCC
1015]
Length = 315
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ A++A A +
Sbjct: 68 NLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 127
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 128 LQGEVIEGRTLSIEKAR 144
>gi|57118282|gb|AAW34233.1| transformer 2 [Musca domestica]
Length = 232
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 2 SHFGKSGPPDIRDTY---------------SLLVLNITFRTTADDLFPLFEKYGKVVDVF 46
SH +S PP R Y L V ++ TT + +F KYG + +
Sbjct: 68 SHGNRSKPPRSRSPYDRNYRNNREKPSPCRCLGVFGLSVHTTQQQIREIFSKYGPIERIQ 127
Query: 47 IPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFA 92
+ D +TG SRGF F+ YK+ +A+ A D+ G+ VDGR I V ++
Sbjct: 128 VVVDAQTGRSRGFCFIYYKHLADAEVARDQCCGQEVDGRRIRVAYS 173
>gi|212539754|ref|XP_002150032.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067331|gb|EEA21423.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
Length = 341
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ A++A A +
Sbjct: 71 NLFVTGIHPRLTEADISRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 130
Query: 77 LDGRVVDGREITVQFAK 93
L G V+DG ++++ A+
Sbjct: 131 LQGEVIDGLTLSIEKAR 147
>gi|297746454|emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 98/215 (45%), Gaps = 60/215 (27%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGD--------------------- 55
SLLV N+ +DL F ++G + D+++PRD TG+
Sbjct: 39 SLLVRNLRHDCRGEDLRRPFGQFGPLKDIYLPRDYYTGEIKVLKTSINLEEFQVILKLTL 98
Query: 56 ---SRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
RGF FV+Y +A +A ++DG+++ GRE+TV FA+ N +K R E
Sbjct: 99 AREPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAEE--NRKKPSDMRARE---- 152
Query: 113 SKGRSR-----------SRSPRPRY-RDEHRDKDY-----RRRSRSRSRERYDR--DRYR 153
+GR R SRSP PR+ R R +DY +RR SRS DR R R
Sbjct: 153 -RGRGRFYDRRRSPLRYSRSPPPRHARSPSRGRDYYSPSPKRRQYSRSVSPQDRRYSRDR 211
Query: 154 SKERDHRRR----------SRSRSASPDRHKNHGR 178
S D RRR SRSRS SP R ++ R
Sbjct: 212 SYTPDGRRRSYTRSPPYNGSRSRSQSPIRGESPSR 246
>gi|326933179|ref|XP_003212685.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Meleagris
gallopavo]
Length = 278
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 9/103 (8%)
Query: 12 IRDTYSLLVLNITFRTTAD------DLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
+R+ Y + L T R A+ DL F +YG +VDV++P D T RGFA+V+++
Sbjct: 75 LRNNYVVAKLKRTCRGLAERSSQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFE 134
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFAK---YGPNAEKIQQGR 105
+A+ A+ LD + + GR+I +QFA+ PN K ++GR
Sbjct: 135 DVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGR 177
>gi|401399560|ref|XP_003880579.1| putative RNA recognition motif-containing protein [Neospora caninum
Liverpool]
gi|325114990|emb|CBZ50546.1| putative RNA recognition motif-containing protein [Neospora caninum
Liverpool]
Length = 1240
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ V I T DDL F ++G + V + R + G +RG+ FV + A+ AQ+AV+
Sbjct: 233 NVFVFQIPLSWTEDDLHQQFSEWGTITSVRVER-KGDGRNRGYGFVCFSDAESAQRAVES 291
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGR--IVESSSKSKGRSRSRSPRPRYRDEHRDKD 134
+DGRV++G+++ V K P ++ + R +V + + G ++RS RDEH D
Sbjct: 292 MDGRVIEGKQLKVSLKK--PRQQERHEERVPVVHAVQGASGAVKTRSGE-EGRDEHGDPL 348
Query: 135 YRRRSRSRSRER 146
RS + + R
Sbjct: 349 PETRSTEQEKGR 360
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
SL V ++ + L FE YG+ + R RR G S+G+ FV ++ A+ A A+
Sbjct: 372 CSLFVFHVPPLWGDEQLLKHFELYGRCASAVVVR-RRDGTSKGYGFVDFEDAESALCALQ 430
Query: 76 RLDGRVVDGREITVQF 91
+ + VDG+ + V
Sbjct: 431 QANQAHVDGKRLKVLL 446
>gi|392568432|gb|EIW61606.1| hypothetical protein TRAVEDRAFT_69926 [Trametes versicolor
FP-101664 SS1]
Length = 333
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D +D+ + + T D+ +F +YG+++DV +PRD+ TG +GFAFV Y+
Sbjct: 26 DYKDSAYIFAGGLNTELTEGDVITIFSQYGEIMDVNMPRDKETGKPKGFAFVMYEDQRST 85
Query: 71 QKAVDRLDGRVVDGREITVQFAK-YGPNAEKIQQGRIVESSSKS 113
AVD L+G + R I V K Y EK + G + E +S
Sbjct: 86 VLAVDNLNGAKILERTIRVDHVKNYKQPREKGEDGELHEREEQS 129
>gi|255537535|ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
gi|223549733|gb|EEF51221.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
Length = 204
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DL F K GKV++ + D RT +SRGFAFV + ++A++ V
Sbjct: 48 NLYVTGLSTRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLEDAERCVKY 107
Query: 77 LDGRVVDGREITVQFAK 93
L+ V++GR ITV+ AK
Sbjct: 108 LNRSVLEGRLITVEKAK 124
>gi|395830899|ref|XP_003788550.1| PREDICTED: transformer-2 protein homolog alpha isoform 1
[Otolemur garnettii]
gi|194385084|dbj|BAG60948.1| unnamed protein product [Homo sapiens]
Length = 180
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 7 HTGSRANPD--PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 64
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 65 YFERIDDSKEAMERANGMELDGRRIRVDYS 94
>gi|395830901|ref|XP_003788551.1| PREDICTED: transformer-2 protein homolog alpha isoform 2
[Otolemur garnettii]
gi|395830903|ref|XP_003788552.1| PREDICTED: transformer-2 protein homolog alpha isoform 3
[Otolemur garnettii]
gi|90083128|dbj|BAE90646.1| unnamed protein product [Macaca fascicularis]
gi|194373917|dbj|BAG62271.1| unnamed protein product [Homo sapiens]
gi|194374591|dbj|BAG62410.1| unnamed protein product [Homo sapiens]
Length = 181
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 7 HTGSRANPD--PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 64
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++R +G +DGR I V ++
Sbjct: 65 YFERIDDSKEAMERANGMELDGRRIRVDYS 94
>gi|158828228|gb|ABW81106.1| putRNAbp29 [Cleome spinosa]
Length = 338
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V ++ R T DL F K GKVVDV + D T +SRGF FV + ++A + +
Sbjct: 45 SLYVTGLSHRVTKRDLEDHFSKEGKVVDVNLVLDPWTRESRGFGFVTMENMEDANRCIKY 104
Query: 77 LDGRVVDGREITVQFA 92
LD V++GR ITV+ A
Sbjct: 105 LDRSVLEGRIITVEKA 120
>gi|349804063|gb|AEQ17504.1| putative cold-inducible rna-binding protein b [Hymenochirus
curtipes]
Length = 123
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + + F T D L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 6 LFIGGLNFDTNEDGLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 65
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 66 NGKAVDGRQIRV 77
>gi|375149693|ref|YP_005012134.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361063739|gb|AEW02731.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 112
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
++ V N++F T DDL F +YG+V + D+ TG SRGF FV + A+KA+
Sbjct: 1 MNIYVSNLSFNVTDDDLEGFFAEYGEVSSARVITDKFTGKSRGFGFVEMPNDEAAKKAIT 60
Query: 76 RLDGRVVDGREITV 89
LDG V+GREI V
Sbjct: 61 ELDGGRVEGREIKV 74
>gi|198424500|ref|XP_002131886.1| PREDICTED: similar to Transformer-2 protein homolog (TRA-2 alpha)
[Ciona intestinalis]
Length = 283
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ T DL +F +YG++ D+ + D++TG SRGF FV + D+A +A +R
Sbjct: 110 CLGVFGLSLYTNDSDLRSVFSRYGRITDINVVIDQKTGRSRGFGFVYFDNDDDAAEAKER 169
Query: 77 LDGRVVDGREITVQFA 92
+G +DGR I V ++
Sbjct: 170 ANGMELDGRNIRVDYS 185
>gi|392868156|gb|EJB11446.1| transformer-SR ribonucleoprotein, variant [Coccidioides immitis RS]
Length = 288
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV +D+A+ A +
Sbjct: 67 NLFVTGIHPRLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKEG 126
Query: 77 LDGRVVDGREITVQFAK 93
L G ++GR ++++ A+
Sbjct: 127 LQGESIEGRTLSIEKAR 143
>gi|357123012|ref|XP_003563207.1| PREDICTED: transformer-2 sex-determining protein-like [Brachypodium
distachyon]
Length = 241
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ RT+ DDL F K GKV D + D RT +SRGFAFV ++A++ +
Sbjct: 111 NLYVTGLSTRTSGDDLEKFFSKEGKVKDCHVVMDPRTKESRGFAFVTMDNIEDARRCIKY 170
Query: 77 LDGRVVDGREITVQFAK 93
L V++GR I+V AK
Sbjct: 171 LHRTVLEGRLISVAKAK 187
>gi|367025775|ref|XP_003662172.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
gi|347009440|gb|AEO56927.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
Length = 324
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ LFEKYG+V I RD +G+SRGF FV+ +++A A++
Sbjct: 71 NLFVTGIHPRLEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMVTSEQADAAMEG 130
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR + ++ A+
Sbjct: 131 LRGEVIEGRTLNIEKAR 147
>gi|296422908|ref|XP_002841000.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637228|emb|CAZ85191.1| unnamed protein product [Tuber melanosporum]
Length = 332
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T DD+ LF KYG+V I D T +SRGF FV+ D+A A +
Sbjct: 95 NLFVTGIHPRLTEDDVTRLFAKYGEVEKCQIMLDPHTKESRGFGFVKLATLDQADSAKEH 154
Query: 77 LDGRVVDGREITVQFAK 93
L G V +GR ++++ A+
Sbjct: 155 LQGEVFEGRTLSIEKAR 171
>gi|358369534|dbj|GAA86148.1| transformer-SR ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 314
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ A++A A +
Sbjct: 68 NLFVTGIHPRLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 127
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 128 LQGEVIEGRTLSIEKAR 144
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 25/162 (15%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT + FE YG + V + D+ RG+AF+ Y + + + A +
Sbjct: 139 TLFVARLNYETTESRIKREFESYGPIKRVRLITDKAANKPRGYAFIEYMHTRDMKAAYKQ 198
Query: 77 LDGRVVDGREITVQF--AKYGPN----------------AEKIQQGRIVESSSKSKGRSR 118
DGR +DGR + V + PN E++ Q +S G SR
Sbjct: 199 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRNSGRELQQSGGSSR 258
Query: 119 SRSPRPRYRDEHRDKDYRRRSRSRSRERY-DRDRYRSKERDH 159
S PRP R+ Y R R +SRER DR++ R K R+H
Sbjct: 259 SEEPRP------REDRYNERDREKSRERGRDREKEREKSREH 294
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V + F T DL +F ++G+++DV + RD+ TG SRGF F+ Y+
Sbjct: 28 KDSAYIYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVL 87
Query: 73 AVDRLDGRVVDGREITV 89
AVD ++G V GR + V
Sbjct: 88 AVDNMNGTQVMGRTLKV 104
>gi|402226431|gb|EJU06491.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 304
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T L V ++ RT DL LF +YG V V I D+R+ SRGF F++ ++A K +
Sbjct: 71 TNVLGVFGLSVRTVERDLEELFNQYGTVEHVTIVYDQRSDRSRGFGFIQMATVEDATKCI 130
Query: 75 DRLDGRVVDGREITVQFA 92
L+GR V+GR I V ++
Sbjct: 131 SELNGRDVNGRNIRVDYS 148
>gi|393245975|gb|EJD53484.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 288
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 7 SGPPDIRDTYSLL-VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
+G P + S+L V ++ RTT DL F +YG V V I D+R+ SRGF F+R
Sbjct: 77 AGAPINPNPSSVLGVFGLSIRTTERDLDEEFARYGAVEKVTIVYDQRSDRSRGFGFIRMA 136
Query: 66 YADEAQKAVDRLDGRVVDGREITVQFA 92
++AQ+ +D+L+G ++GR I V F+
Sbjct: 137 TVEDAQRCIDKLNGIELNGRRIRVDFS 163
>gi|449674933|ref|XP_002158647.2| PREDICTED: transformer-2 protein homolog beta-like [Hydra
magnipapillata]
Length = 221
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT ++ FE+YG+VVD + D TG SRGFAF+ EA+ A +R
Sbjct: 97 CLGVFGLSLYTTDREVREAFERYGRVVDCNVVHDHNTGRSRGFAFLNMSSISEAEDAKER 156
Query: 77 LDGRVVDGREITVQFA 92
++G +DGR I V F+
Sbjct: 157 MNGAELDGRRIRVDFS 172
>gi|393911217|gb|EJD76219.1| cyclophilin-6 [Loa loa]
Length = 430
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 39/196 (19%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H+ + PPD L V + TT +DL +F ++GK+ I RD++TG S +AFV
Sbjct: 231 HYAEEKPPD----NVLFVCKLNPVTTDEDLEIIFSRFGKITCCEIIRDKKTGASLQYAFV 286
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFAK------------------YGPN-AEK--I 101
++ + A ++D ++D R I V F++ + P+ AEK I
Sbjct: 287 EFEEVQSCENAYFKMDNVLIDDRRIHVDFSQSVAKNYQWKRKEGSGKRAHKPDIAEKFHI 346
Query: 102 QQGRI-----------VESSSKSKGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRD 150
+ ++ ++S+ + K S+ R P +RD R R R SR+ +
Sbjct: 347 EHKKLKSEKCNEKEKKLQSNERIKQYSKKRLNSPDHRDHSRS---YRHERPVSRKLHVHK 403
Query: 151 RYRSKERDHRRRSRSR 166
R RS+E RRSRSR
Sbjct: 404 RSRSRETRAHRRSRSR 419
>gi|321479086|gb|EFX90042.1| transformer-2 protein-like protein [Daphnia pulex]
Length = 259
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 9 PPDIRD-TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PPD + T L V + TT +L +F KYG + V + +D +TG SRGFAFV ++
Sbjct: 109 PPDNPEPTRCLGVFGMGLYTTETELQHVFAKYGPLEKVQVVKDAKTGRSRGFAFVYFESL 168
Query: 68 DEAQKAVDRLDGRVVDGREITVQFA 92
++A+ A ++ G +DGR I V ++
Sbjct: 169 EDAKLAKEQCTGLEIDGRRIRVDYS 193
>gi|15292733|gb|AAK92735.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
Length = 352
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V ++ R T DL F K GKV DV + D T +SRGF F+ K +A + +
Sbjct: 46 SLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRS 105
Query: 77 LDGRVVDGREITVQFA 92
LD V+ GR ITV+ A
Sbjct: 106 LDHSVLQGRVITVEKA 121
>gi|449270976|gb|EMC81612.1| Transformer-2 like protein alpha, partial [Columba livia]
Length = 264
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 98 HTGSRANPDPNT--CLGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 155
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++ +G +DGR I V ++
Sbjct: 156 YFERIDDSKEAMEHANGMELDGRRIRVDYS 185
>gi|242803744|ref|XP_002484236.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717581|gb|EED17002.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 329
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V I D T +SRGF FV+ A++A A +
Sbjct: 73 NLFVTGIHPRLTEADISRLFEKYGDVESCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAK 93
L G V+DG ++++ A+
Sbjct: 133 LQGEVIDGLTLSIEKAR 149
>gi|449492584|ref|XP_002192791.2| PREDICTED: transformer-2 protein homolog alpha [Taeniopygia
guttata]
Length = 275
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++ +G +DGR I V ++
Sbjct: 166 YFERIDDSKEAMEHANGMELDGRRIRVDYS 195
>gi|224074996|ref|XP_002304510.1| predicted protein [Populus trichocarpa]
gi|222841942|gb|EEE79489.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T+ DL F GKV++ + D RT +SRGFAFV + ++A + V
Sbjct: 49 NLYVTGLSTRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVEDANRCVKY 108
Query: 77 LDGRVVDGREITVQFAK 93
L+ V++GR ITV+ AK
Sbjct: 109 LNRSVLEGRVITVEKAK 125
>gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes]
gi|49204529|dbj|BAD24699.1| transformer-2a3 [Oryzias latipes]
Length = 283
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G G PD + L V ++ TT DL +F KYG + +V I D+++ SRGFAFV
Sbjct: 104 HIGNRGNPD--PSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFV 161
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++++++A ++ +G +DGR I V F+
Sbjct: 162 YFENSEDSKEAKEQANGMELDGRRIRVDFS 191
>gi|424513420|emb|CCO66042.1| unnamed protein product [Bathycoccus prasinos]
Length = 479
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD SL V + TT +DL +F ++GKV + RDRRTGDS +AF+ ++ +
Sbjct: 254 PPD----ESLFVCKLNPVTTDEDLEIIFSRFGKVTSCDVIRDRRTGDSLCYAFINFETKE 309
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+ A ++D ++D R I V F++
Sbjct: 310 MCEAAYFKMDNALIDDRRIHVDFSQ 334
>gi|49204543|dbj|BAD24702.1| transformer-2b3 [Oryzias latipes]
Length = 321
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 120 HIGNRANPD--PNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFV 177
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +A++A ++ +G +DGR I V F+
Sbjct: 178 YFENTPDAKEAKEKANGMELDGRRIRVDFS 207
>gi|357624977|gb|EHJ75550.1| hypothetical protein KGM_17346 [Danaus plexippus]
Length = 666
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 10/158 (6%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++GK+V + RD++T +S +AF+ + + A ++
Sbjct: 242 LFVCKLNPVTTDEDLEIIFSRFGKIVSCEVIRDKKTSNSLQYAFIEFDNKKSCEDAYFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHR-----D 132
D ++D R I V F++ + +GR V+ + R+P R+ HR D
Sbjct: 302 DNVLIDDRRIHVDFSQSVSKMRWLGKGRGVQYFDDDSNKKSQRNPN---RNSHRQQQTDD 358
Query: 133 KDYRRRSRS--RSRERYDRDRYRSKERDHRRRSRSRSA 168
++RRR + +E + D+ R RDH+ + + ++
Sbjct: 359 TNHRRRYENDRNGKESHRHDKERDSYRDHKDKPKDKNV 396
>gi|327274869|ref|XP_003222198.1| PREDICTED: transformer-2 protein homolog alpha-like [Anolis
carolinensis]
Length = 279
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 106 HTGSRANPDPNTC--LGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 163
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D++++A++ +G +DGR I V ++
Sbjct: 164 YFERIDDSKEAMEHANGMELDGRRIRVDYS 193
>gi|261196578|ref|XP_002624692.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239595937|gb|EEQ78518.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
Length = 312
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ +++A A +
Sbjct: 70 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTSEQADAAKEG 129
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 130 LQGEVIEGRTLSIEKARRG 148
>gi|312375766|gb|EFR23071.1| hypothetical protein AND_13723 [Anopheles darlingi]
Length = 414
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 54/81 (66%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L + ++ TT + L LF +YG+V D+ + D +T SRG++F+ +K+A +A++A +
Sbjct: 284 CLGIFGMSPETTENTLMKLFSRYGQVKDIKLIYDGKTNVSRGYSFIYFKHASDARRAQRK 343
Query: 77 LDGRVVDGREITVQFAKYGPN 97
L+G ++DGR++ V F++ P+
Sbjct: 344 LNGTMLDGRKVRVDFSRSKPH 364
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
+ S++V NI TT L+ F ++GK+ + IP + G A+V + Y +E Q+A+
Sbjct: 111 SVSIIVRNIRDDTTDWQLYEAFRRFGKIYGILIP-------THGTAYVGFYYEEETQRAL 163
Query: 75 DRLDGRVVDGREITVQFAKYGPNAEKI 101
+ +D + +G + V + ++I
Sbjct: 164 E-MDNNMFNGNRMRVAMLRRNLPLQQI 189
>gi|324504792|gb|ADY42066.1| TAR DNA-binding protein 43 [Ascaris suum]
Length = 446
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 6/92 (6%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+R L+VLNI F TT D L FEK+GKV I +R TG S+G+ F++ +E Q
Sbjct: 147 LRAPVDLVVLNIDFGTTKDSLVKYFEKFGKVEFAEIKTERATGKSKGYGFIKMSTLEEQQ 206
Query: 72 KAVDR---LDGRVVDGREITVQFAKYGPNAEK 100
K ++ +DGRVV E+ + P+A+K
Sbjct: 207 KVLETGHFIDGRVV---EVRIPLRTCDPDAKK 235
>gi|303323191|ref|XP_003071587.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111289|gb|EER29442.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320033282|gb|EFW15230.1| transformer-SR ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 271
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV +D+A+ A +
Sbjct: 67 NLFVTGIHPRLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKEG 126
Query: 77 LDGRVVDGREITVQFAK 93
L G ++GR ++++ A+
Sbjct: 127 LQGESIEGRTLSIEKAR 143
>gi|388518723|gb|AFK47423.1| unknown [Medicago truncatula]
Length = 340
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 10 PDIRDT-YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PD+ + +L V ++ R T +L F GKVVDV + D T +SRGF FV +
Sbjct: 38 PDVENPGNNLYVTGLSPRITKRELEKHFSAKGKVVDVHLVVDPWTRESRGFGFVTMDTLE 97
Query: 69 EAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRD 128
EA + V L+ V++GR ITV+ A+ + + + + RS S SPR
Sbjct: 98 EADRCVKYLNRSVLEGRVITVEKARRRRGRTPTPGKYLGLKTIRGRRRSPSYSPR----- 152
Query: 129 EHRDKDYR--RRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPD 171
R Y RRS +RS D R RS D+RRR RS SPD
Sbjct: 153 --RSPSYSPYRRSYNRSPYSSDHSRSRSYSPDYRRR---RSYSPD 192
>gi|239609512|gb|EEQ86499.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327350257|gb|EGE79114.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 315
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV+ +++A A +
Sbjct: 73 NLFVTGIHPRLTESDVSRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTSEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAKYG 95
L G V++GR ++++ A+ G
Sbjct: 133 LQGEVIEGRTLSIEKARRG 151
>gi|444517993|gb|ELV11894.1| RNA-binding motif protein, X-linked 2, partial [Tupaia chinensis]
Length = 323
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + + T D+ +F +YG+VV++ + RD++TG S+GF F+ Y+
Sbjct: 30 KDSAWIFLGGLPYELTEGDIICVFSQYGEVVNINLVRDKKTGKSKGFCFLCYEDQRSTIL 89
Query: 73 AVDRLDGRVVDGREITV 89
AVD +G + GR I V
Sbjct: 90 AVDNFNGIKIKGRTIRV 106
>gi|358400404|gb|EHK49735.1| hypothetical protein TRIATDRAFT_297628 [Trichoderma atroviride IMI
206040]
Length = 344
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 49/82 (59%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +L V I R + ++ +FEKYG+V I RD T +SRGF FV+ +++A+
Sbjct: 70 INPGSNLFVTGIHPRLSEAEVSKMFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSEQAE 129
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A + L G V++GR ++++ A+
Sbjct: 130 AAREGLQGEVIEGRTMSIEKAR 151
>gi|387913868|gb|AFK10543.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ D L V I F T L +F KYG V +V + R+R T S+G FV ++ D+A+
Sbjct: 1 MSDEGKLFVGGINFETDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGLGFVTFENPDDAR 60
Query: 72 KAVDRLDGRVVDGREITVQFA 92
A+ ++G+ VDGR+I V A
Sbjct: 61 DALAGMNGKTVDGRQIRVDHA 81
>gi|440636081|gb|ELR06000.1| hypothetical protein GMDG_01961 [Geomyces destructans 20631-21]
Length = 307
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 30/160 (18%)
Query: 6 KSGPPD-----IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFA 60
+ GPP + +L V I R + ++ LFEKYG+V I D T +SRGF
Sbjct: 64 RGGPPPQDDGAVNPGSNLFVTGIHPRLSEAEVTRLFEKYGEVEKCQIMLDPHTKESRGFG 123
Query: 61 FVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSR 120
FV+ AD+A A + L G V++GR ++++ A+ RSR R
Sbjct: 124 FVKMVTADQADAAKEGLQGEVIEGRTLSIEKAR----------------------RSRPR 161
Query: 121 SPRPR--YRDEHRDKDYRRRSRSRSRERYDRDRYRSKERD 158
+P P + R+ D R R +RYD DR R RD
Sbjct: 162 TPTPGKYFGPPKREDDPRGPPPGRWGDRYD-DRRRGGFRD 200
>gi|391341895|ref|XP_003745262.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Metaseiulus occidentalis]
Length = 531
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 5/157 (3%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T DDL +F ++G++ I RD +TG+S +AF+ + + ++A ++
Sbjct: 242 LFVCKLNPVTNDDDLELIFSRFGEIKGCEIIRDWKTGESLQYAFIEFANKESCEQAYFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGR-IVESSSKSKGRSRSRS-PRPRY--RDEHRDK 133
D ++D R I V F++ + +GR +V S+ K ++RS PR +Y RD +
Sbjct: 302 DNVLIDDRRIHVDFSQSVAKVKWKGKGRGVVGDWSEDKKKTRSDDRPREKYVMRDTRKKD 361
Query: 134 DYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASP 170
Y+ R S R + R S+ D+R RS R SP
Sbjct: 362 GYKLILRGESDARKSQKREMSRSPDNRHRSH-RKTSP 397
>gi|119189299|ref|XP_001245256.1| hypothetical protein CIMG_04697 [Coccidioides immitis RS]
gi|392868155|gb|EJB11445.1| transformer-SR ribonucleoprotein [Coccidioides immitis RS]
Length = 271
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG V + I D T +SRGF FV +D+A+ A +
Sbjct: 67 NLFVTGIHPRLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKEG 126
Query: 77 LDGRVVDGREITVQFAK 93
L G ++GR ++++ A+
Sbjct: 127 LQGESIEGRTLSIEKAR 143
>gi|169600369|ref|XP_001793607.1| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
gi|160705424|gb|EAT89749.2| hypothetical protein SNOG_03018 [Phaeosphaeria nodorum SN15]
Length = 373
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG SRGFA+++Y+
Sbjct: 28 DYRDTAFINIGGLPFELSEGDIITIFSQYGEPVWVKLARDKETGKSRGFAWIKYEDQRSC 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGP 96
AVD L G + R I V A+Y P
Sbjct: 88 DLAVDNLGGSTIMDRVIRVDHARYKP 113
>gi|401408831|ref|XP_003883864.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
gi|325118281|emb|CBZ53832.1| CBR-RSP-4 protein, related [Neospora caninum Liverpool]
Length = 192
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ N+ F T+ D + +FEK+G+V DV++P D T RGF FV + AQ+A+
Sbjct: 6 SLLIRNLCFETSPDRVRQIFEKFGRVRDVYLPLDHFTKRPRGFGFVEFYEEAAAQEAMRE 65
Query: 77 LDGRVVDGREITVQFAK 93
+D ++DG E+ V A+
Sbjct: 66 MDRTMIDGNEVYVIIAQ 82
>gi|42561780|ref|NP_563787.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|28973767|gb|AAO64199.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
gi|332189991|gb|AEE28112.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 382
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V ++ R T DL F K GKV DV + D T +SRGF F+ K +A + +
Sbjct: 76 SLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRS 135
Query: 77 LDGRVVDGREITVQFA 92
LD V+ GR ITV+ A
Sbjct: 136 LDHSVLQGRVITVEKA 151
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like
[Ornithorhynchus anatinus]
Length = 270
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SRGF FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|339258866|ref|XP_003369619.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Trichinella spiralis]
gi|316966115|gb|EFV50740.1| putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type
[Trichinella spiralis]
Length = 403
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H+ + PPD L V + TT DDL +F ++G ++ + RDR+TGDS +AF+
Sbjct: 231 HYAEEKPPD----NVLFVCKLNAVTTEDDLEVIFGRFGPILSCEVIRDRKTGDSLQYAFI 286
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
+ A + A ++D ++D R I V F++
Sbjct: 287 EFADAKHCENAYFKMDNVLIDDRRIHVDFSQ 317
>gi|296816707|ref|XP_002848690.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
gi|238839143|gb|EEQ28805.1| U2 snRNP component IST3 [Arthroderma otae CBS 113480]
Length = 276
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|398412159|ref|XP_003857408.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
gi|339477293|gb|EGP92384.1| hypothetical protein MYCGRDRAFT_107156 [Zymoseptoria tritici
IPO323]
Length = 329
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT L + + F + D+ +F +YG V + + RD+ TG SRGF F++Y+
Sbjct: 28 DYRDTAYLYIGGLPFELSEGDILTIFSQYGNPVHINLVRDKETGKSRGFCFLKYEDQRSC 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V G+ ++V +Y
Sbjct: 88 DLAVDNLSGAGVMGKVLSVDHTRY 111
>gi|327293734|ref|XP_003231563.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
gi|326466191|gb|EGD91644.1| U2 snRNP component IST3 [Trichophyton rubrum CBS 118892]
Length = 277
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + + + + D+ +F +YG+ V V + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAFVYIGGLPYEVSEGDIVTIFSQYGEPVYVNLVRDKETGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR I+V +Y
Sbjct: 84 QRSCDLAVDNLSGAKVMGRIISVDHTRY 111
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+ +T L + N+ + T DDL LFE +GK+ +++IP DR + S+G AF+ + + A
Sbjct: 321 DVGETGRLFIRNLAYTVTEDDLKKLFEPFGKLSEIYIPIDRNSKKSKGIAFLLFMIPENA 380
Query: 71 QKAVDRLDGRVVDGREITVQFAK 93
+A+ +DG+ + GR + + AK
Sbjct: 381 MRAMTEMDGKAIQGRLVHILPAK 403
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
V NI F + ++ LF YG++ V IP+ + TG RGF FV+Y EA+ A+D L
Sbjct: 781 VKNIPFEASPAEVRKLFATYGELQSVRIPK-KPTGGHRGFGFVQYLTEQEAKNAMDALRN 839
Query: 80 RVVDGREITVQFAKYGPNAEKIQQ 103
+ GR + ++FA+ N ++++Q
Sbjct: 840 SHLYGRHLVLEFAELDKNIDQLRQ 863
>gi|326510839|dbj|BAJ91767.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV NI +DL FE++G V DV++P+D T + RGFAFV + +A A
Sbjct: 38 SLLVRNIPLSCRPEDLRVPFERFGPVRDVYLPKDYYTREPRGFAFVEFVDPYDASDAQYH 97
Query: 77 LDGRVVDGREITVQFA 92
L+ + GREITV A
Sbjct: 98 LNRSLFFGREITVVVA 113
>gi|115398724|ref|XP_001214951.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
gi|114191834|gb|EAU33534.1| U2 snRNP component IST3 [Aspergillus terreus NIH2624]
Length = 292
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + + + D+ +F +YG+ V V + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPYDLSEGDVVTIFSQYGEPVHVNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRMLRVDHVRY 111
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SR F FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL V N+ T +DL F +YG +VDV++P D RGFA+++++
Sbjct: 7 PPNT----SLFVRNVGDATRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 DAEDALYNLNRKWVCGRQIEIQFAQ 87
>gi|359494535|ref|XP_002266085.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Vitis
vinifera]
Length = 627
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD L V + T +DL +F ++G V+ I RD +TGDS +AF+ ++ +
Sbjct: 240 PPD----NVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNE 295
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---------------KYGPNAEKIQQGRIVESSSKS 113
++A ++D ++D R I V F+ + G + G + +
Sbjct: 296 ACEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQYRRRDHQTGKGTGCFKCGAVDHIAKDC 355
Query: 114 KGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRH 173
G + P+Y + + + + SR +D D S +R+ RR+ ++
Sbjct: 356 TGSPTKQQQPPKYILKDNNTQHGGDNNSRYEMVFDEDTSESPKREKRRQDHGPEDQIEKE 415
Query: 174 KNHGRGKYDEERRSRSR 190
K + RG D +RR +
Sbjct: 416 KLNRRGSEDWKRRDHDK 432
>gi|367038789|ref|XP_003649775.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
gi|346997036|gb|AEO63439.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ LFEKYG+V I RD +G+SRGF FV+ +++A A++
Sbjct: 72 NLFVTGIHPRIEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMMTSEQADAAMEG 131
Query: 77 LDGRVVDGREITVQFAK 93
L G +++GR + ++ A+
Sbjct: 132 LRGEIIEGRTLNIEKAR 148
>gi|296082685|emb|CBI21690.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 19/197 (9%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PPD L V + T +DL +F ++G V+ I RD +TGDS +AF+ ++ +
Sbjct: 240 PPD----NVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNE 295
Query: 69 EAQKAVDRLDGRVVDGREITVQFA---------------KYGPNAEKIQQGRIVESSSKS 113
++A ++D ++D R I V F+ + G + G + +
Sbjct: 296 ACEQAYFKMDNALIDDRRIHVDFSQSVSKLWSQYRRRDHQTGKGTGCFKCGAVDHIAKDC 355
Query: 114 KGRSRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRH 173
G + P+Y + + + + SR +D D S +R+ RR+ ++
Sbjct: 356 TGSPTKQQQPPKYILKDNNTQHGGDNNSRYEMVFDEDTSESPKREKRRQDHGPEDQIEKE 415
Query: 174 KNHGRGKYDEERRSRSR 190
K + RG D +RR +
Sbjct: 416 KLNRRGSEDWKRRDHDK 432
>gi|123473695|ref|XP_001320034.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121902831|gb|EAY07811.1| hypothetical protein TVAG_312100 [Trichomonas vaginalis G3]
Length = 215
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
S+ + NI F T L +F K+G+V+ IP ++ S+G+ FV + ++AQKA+D
Sbjct: 31 VSIHIGNIPFELTEPKLKEIFGKFGEVLSSKIPTNQAN-RSKGYGFVSFALKEDAQKAID 89
Query: 76 RLDGRVVDGREITVQFAK 93
++ +DGR+I V+FAK
Sbjct: 90 SMNNTELDGRKIEVEFAK 107
>gi|338721847|ref|XP_001504243.3| PREDICTED: serine/arginine-rich splicing factor 10 [Equus caballus]
Length = 153
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 27 TTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGRE 86
++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+ LD + + GR+
Sbjct: 1 MASEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQ 60
Query: 87 ITVQFAK---YGPNAEKIQQGRIV 107
I +QFA+ PN K ++GR V
Sbjct: 61 IEIQFAQGDRKTPNQMKAKEGRNV 84
>gi|390348058|ref|XP_796831.2| PREDICTED: uncharacterized protein LOC592201 [Strongylocentrotus
purpuratus]
Length = 324
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT DL ++E YG + +V + D +TG SRGFAFV + +A A +
Sbjct: 152 CLGVFGLSLYTTERDLRDVYEHYGTLTNVNVVYDHQTGRSRGFAFVMFANTGDATAARES 211
Query: 77 LDGRVVDGREITVQFA 92
+G VDGR I V F+
Sbjct: 212 TNGTEVDGRRIRVDFS 227
>gi|241655012|ref|XP_002411352.1| transformer-2 protein C, putative [Ixodes scapularis]
gi|215503982|gb|EEC13476.1| transformer-2 protein C, putative [Ixodes scapularis]
Length = 258
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ T DL +F KYG + DV + D ++G SRGF+FV ++ ++A+ A DR
Sbjct: 106 CLGVFGLSLYTQERDLKEVFSKYGPLEDVQVVYDAQSGRSRGFSFVYFENVEDAKAAKDR 165
Query: 77 LDGRVVDGREITVQFA 92
+G +DGR+I V ++
Sbjct: 166 CNGLEIDGRKIRVDYS 181
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + ++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+ L
Sbjct: 97 LRVWRLVKDAGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNL 156
Query: 78 DGRVVDGREITVQFAK---YGPNAEKIQQGRIV 107
D + + GR+I +QFA+ PN K ++GR V
Sbjct: 157 DRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNV 189
>gi|383847372|ref|XP_003699328.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like
[Megachile rotundata]
Length = 507
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 21/178 (11%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK++ + RD++TGDS +AF+ + ++A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSRFGKIIGCEVIRDKQTGDSLQYAFIEFAERKSCEEAFFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRR 137
D ++D R I V F S S +K R + + +Y DE ++ + +
Sbjct: 302 DNVLIDDRRIHVDF-----------------SQSVAKMRWKGKGKGIQYFDEEDEEGHNK 344
Query: 138 RSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDEERRSRSRSYERY 195
+R + + + + RS+ R+ RR++ H+ H R K + SR+ ERY
Sbjct: 345 DTRGKRKNDFRGNETRSR-REFDRRNKEEIVE---HRKHERRKEVKGNSDYSRNGERY 398
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFAFV
Sbjct: 69 HIGNRANPDPNSC--LGVFGLSLYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFV 126
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++++++A + +G +DGR I V ++
Sbjct: 127 YFENSEDSKEAKEHANGMELDGRRIRVDYS 156
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
LLV NI ++L FE++G V DV+IPRD +G RGFAFV + A +A +A +
Sbjct: 49 LLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSM 108
Query: 78 DGRVVDGREITVQFA 92
+ R GREITV A
Sbjct: 109 NRRSFAGREITVVVA 123
>gi|154285756|ref|XP_001543673.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407314|gb|EDN02855.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 232
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + ++ + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 31 DYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRST 90
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G + GR I V A+Y
Sbjct: 91 DLAVDNLGGATILGRMIRVDHARY 114
>gi|451997220|gb|EMD89685.1| hypothetical protein COCHEDRAFT_1177492 [Cochliobolus
heterostrophus C5]
Length = 276
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I T D++ LFEKYG V I RD T +SRGF FV+ A++A A +
Sbjct: 66 NLFVTGIHPTLTEDEVTRLFEKYGDVEQCNIMRDPHTKESRGFGFVKMVTAEQADNAKEG 125
Query: 77 LDGRVVDGREITVQFAK 93
L G V GR ++++ A+
Sbjct: 126 LQGEVHQGRTLSIEKAR 142
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLLV N+ + T+ D L F ++G++ DV++P D T RGF FV + +A +A+
Sbjct: 13 SLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFFSHSDADEAMRE 72
Query: 77 LDGRVVDGREITVQFAKYG 95
+ G +DG +I V AK+G
Sbjct: 73 MFGYELDGNKIEVFVAKHG 91
>gi|413934995|gb|AFW69546.1| hypothetical protein ZEAMMB73_512754 [Zea mays]
Length = 283
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T D+ F K+G+VV + + T SRGFAFV +EA++ +
Sbjct: 67 TLYVTGLSSRVTERDVKDYFSKHGRVVGCHVVLEPHTRVSRGFAFVSMDTVEEAERCIKY 126
Query: 77 LDGRVVDGREITVQFAKYG 95
L+G V++GR ITV+ ++ G
Sbjct: 127 LNGSVMEGRNITVEKSRRG 145
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
+ V + F T DL +F ++G+++DV + RD+ TG SRGF F+ Y+ AVD +
Sbjct: 162 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 221
Query: 78 DGRVVDGREITV 89
+G + GR + V
Sbjct: 222 NGTQIIGRTLKV 233
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YSLL+ N+ + T+ + FE++G++ DV++P D T RGF FV Y ++ +AV
Sbjct: 7 YSLLIRNLRYSTSPQIVKETFERFGRIRDVYLPLDYNTRRPRGFGFVEYYEKEDVLEAVK 66
Query: 76 RLDGRVVDGREITVQFAK 93
+D +DG IT A+
Sbjct: 67 AMDNADLDGSVITCCLAQ 84
>gi|451852456|gb|EMD65751.1| hypothetical protein COCSADRAFT_170220 [Cochliobolus sativus
ND90Pr]
Length = 276
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I T D++ LFEKYG V I RD T +SRGF FV+ A++A A +
Sbjct: 66 NLFVTGIHPTLTEDEVTRLFEKYGDVEQCNIMRDPHTKESRGFGFVKMVTAEQADNAKEG 125
Query: 77 LDGRVVDGREITVQFAK 93
L G V GR ++++ A+
Sbjct: 126 LQGEVHQGRTLSIEKAR 142
>gi|405120315|gb|AFR95086.1| hypothetical protein CNAG_01060 [Cryptococcus neoformans var.
grubii H99]
Length = 260
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ T L LF + GKV V I D + +SRGF FV + +EAQ A+D+
Sbjct: 71 NLHVSGLSRAVTERQLEDLFSQIGKVAKVQIMVDPHSQESRGFGFVMMESREEAQAAIDQ 130
Query: 77 LDGRVVDGREITVQFAKYG 95
L G+ V+G+ ITV A+ G
Sbjct: 131 LSGQNVEGKSITVAHARRG 149
>gi|351706796|gb|EHB09715.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 188
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD+ L L++ TT DL +F K G + D+ I D+++ SRGFAFV
Sbjct: 7 HVGNRANPDLNCCLGLFGLSLY--TTERDLREVFSKCGPITDLSIVYDQQSRCSRGFAFV 64
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ D+A++ +R +G +DGR I V F+
Sbjct: 65 YFENVDDAKETKERANGMELDGRRIRVDFS 94
>gi|225554554|gb|EEH02851.1| RNA binding domain-containing protein [Ajellomyces capsulatus
G186AR]
Length = 276
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + ++ + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 28 DYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G + GR I V A+Y
Sbjct: 88 DLAVDNLGGATILGRMIRVDHARY 111
>gi|242790685|ref|XP_002481602.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218718190|gb|EED17610.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 285
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG+ V V + RD+ TG S+GFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPVHVNLVRDKDTGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVMGRVLRVDHTRY 111
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V N+ F +T +DL +F KYG + ++ P D+ T +GFAF+ Y + A KA+ L
Sbjct: 405 LFVRNLPFTSTEEDLEKIFSKYGPLSEIHFPIDKLTKKPKGFAFITYMIPEHAVKALAEL 464
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGR 116
DG+V GR + EKI+ G ESSS K +
Sbjct: 465 DGQVFQGR--MMHLLPSTIRKEKIEDGDAEESSSYKKSK 501
Score = 46.6 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGD---SRGFAFVRYKYADEAQKA 73
+L + N+ F TT D L F K G + I + + S GF FV YK + AQKA
Sbjct: 717 TLFIKNLNFATTEDTLKETFSKVGALKSCTISKKKDKAGTLLSMGFGFVEYKKPESAQKA 776
Query: 74 VDRLDGRVVDGREITVQFAKYG--PNAEKIQQGRIVESSSKSK 114
+ +L G VDG ++ V+ ++ P + ++ +I + SK
Sbjct: 777 LRQLQGCTVDGHKLEVKLSERAVRPAVKSTRKKQIAKKQKTSK 819
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRR-TGDSRGFAFVRYKYADEAQ 71
+ T +LV NI F+ T ++ LF +G++ V +P+ TG RGF FV + +A+
Sbjct: 815 QKTSKILVRNIPFQATVREIRELFSTFGELKTVRLPKKMAGTGSHRGFGFVDFVTKQDAK 874
Query: 72 KAVDRL-DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRS 119
KA L + GR + +++A E +++ K + RS
Sbjct: 875 KAFQALCHSTHLYGRRLVLEWADTEETLEALRRKTAQHFHDSPKKKKRS 923
>gi|403168962|ref|XP_003328523.2| peptidylprolyl isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167741|gb|EFP84104.2| peptidylprolyl isomerase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 437
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F + PP+ L V + T ++DL +F ++G ++ + +D +TGDS +AF+
Sbjct: 241 FAEVAPPE----NILFVCKLNSITRSEDLELIFSRFGTILSCEVIKDAKTGDSLQYAFIE 296
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAK----------YGPNAEKIQQGRIVESSSKS 113
+ ++A++A ++DG ++D R I V F++ + ++++ + E K
Sbjct: 297 FDQREDAERAYFKMDGVLIDDRRIHVDFSQSVSKLHSDWIFKRTGKRVKPNQTYEQRPKK 356
Query: 114 KGRSRSRSPRPR----YRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRS 167
+ S PR R Y D D RS RS R DR RDHR R S
Sbjct: 357 RQPSERSPPRARRDSKYEMSFDDADLIERSARRSDHRRHDDRRPHSSRDHRSNHRQDS 414
>gi|410966510|ref|XP_003989775.1| PREDICTED: serine/arginine-rich splicing factor 10 [Felis catus]
Length = 191
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 29 ADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREIT 88
++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+ LD + + GR+I
Sbjct: 41 SEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIE 100
Query: 89 VQFAK---YGPNAEKIQQGRIV 107
+QFA+ PN K ++GR V
Sbjct: 101 IQFAQGDRKTPNQMKAKEGRNV 122
>gi|240277136|gb|EER40645.1| RNA binding domain-containing protein [Ajellomyces capsulatus H143]
gi|325093957|gb|EGC47267.1| RNA binding domain-containing protein [Ajellomyces capsulatus H88]
Length = 276
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + ++ + D+ +F +YG+ V + + RD+ TG S+GFAF++Y+
Sbjct: 28 DYRDTAYIYIGSLPSDLSEGDILTIFSQYGEPVHLNLVRDKETGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G + GR I V A+Y
Sbjct: 88 DLAVDNLGGATILGRMIRVDHARY 111
>gi|156052172|ref|XP_001592047.1| hypothetical protein SS1G_07495 [Sclerotinia sclerotiorum 1980]
gi|154705271|gb|EDO05010.1| hypothetical protein SS1G_07495 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 313
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R +++ LFEKYG V I RD T +SRGF FV+ +D+A A +
Sbjct: 80 NLFVTGIHPRLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADAAKEG 139
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 140 LQGEVIEGRTLSIEKAR 156
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G P+ + L V ++ TT +L F +YG + ++ + D ++G SRGFAF+
Sbjct: 104 HIGSRANPETNNC--LGVFGLSLSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFL 161
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
Y+ ++A++A DR +G +DGR I V ++
Sbjct: 162 SYESEEDAREAKDRTNGMEIDGRRIRVDYS 191
>gi|115476220|ref|NP_001061706.1| Os08g0385900 [Oryza sativa Japonica Group]
gi|40253470|dbj|BAD05420.1| putative transformer-SR ribonucleoprotein [Oryza sativa Japonica
Group]
gi|40253902|dbj|BAD05836.1| putative transformer-SR ribonucleoprotein [Oryza sativa Japonica
Group]
gi|113623675|dbj|BAF23620.1| Os08g0385900 [Oryza sativa Japonica Group]
gi|215697910|dbj|BAG92152.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T +DL F K GKV + D RT +SRGFAFV D+A++ +
Sbjct: 92 NLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDSVDDARRCIKY 151
Query: 77 LDGRVVDGREITVQFAK 93
L V++GR +TV+ AK
Sbjct: 152 LHRTVLEGRLVTVEKAK 168
>gi|330847367|gb|AEC46649.1| cold inducible RNA binding protein transcript variant 1 [Sus
scrofa]
Length = 172
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++F T L +F KYG++ +V + +DR T SR F FV ++ D+A+ A+ +
Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMAM 67
Query: 78 DGRVVDGREITV 89
+G+ VDGR+I V
Sbjct: 68 NGKSVDGRQIRV 79
>gi|222640483|gb|EEE68615.1| hypothetical protein OsJ_27155 [Oryza sativa Japonica Group]
Length = 271
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T +DL F K GKV + D RT +SRGFAFV D+A++ +
Sbjct: 84 NLYVTGLSTRVTEEDLEKFFSKEGKVQSCHVVLDPRTKESRGFAFVTMDSVDDARRCIKY 143
Query: 77 LDGRVVDGREITVQFAK 93
L V++GR +TV+ AK
Sbjct: 144 LHRTVLEGRLVTVEKAK 160
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ + + T+ + F+KYG + DV++P D T + RGF FV + +A++A+
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKYGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 77 LDGRVVDGREITVQFAKYG 95
++G +DG I V A+ G
Sbjct: 73 MNGSEIDGNRIEVFVAQKG 91
>gi|126310597|ref|XP_001376489.1| PREDICTED: serine/arginine-rich splicing factor 12-like
[Monodelphis domestica]
Length = 257
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 13/94 (13%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY-- 66
PP+ SL V N+T T +DL F +YG +VDV+IP D T RGFA+++Y
Sbjct: 7 PPNT----SLFVRNVTDATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFH 62
Query: 67 -------ADEAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 SLVIFEDVRDAEDALYNLNKKWVCGRQIEIQFAQ 96
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum
3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum
3D7]
Length = 308
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ + F T+ + F+++G + DV++P D T + RGF FV + A +A++A+
Sbjct: 13 SLLIRKLKFDTSPSIVREKFKRFGAIKDVYLPIDYYTKEPRGFGFVEFYDAKDAEQALKE 72
Query: 77 LDGRVVDGREITVQFAKYG 95
++G +DG I V A+ G
Sbjct: 73 MNGSEIDGSRIEVFVAQKG 91
>gi|154312862|ref|XP_001555758.1| hypothetical protein BC1G_05132 [Botryotinia fuckeliana B05.10]
Length = 315
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R +++ LFEKYG V I RD T +SRGF FV+ +D+A A +
Sbjct: 80 NLFVTGIHPRLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADAAKEG 139
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 140 LQGEVIEGRTLSIEKAR 156
>gi|392586895|gb|EIW76230.1| hypothetical protein CONPUDRAFT_111036 [Coniophora puteana
RWD-64-598 SS2]
Length = 321
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V + F T D+ +F +YG+V+DV +PRD+ TG ++GF F+ Y+
Sbjct: 28 KDSAYIYVGGLHFDLTEGDVITIFSQYGEVMDVNLPRDKHTGKTKGFGFLMYEDQRSTIL 87
Query: 73 AVDRLDGRVVDGREITVQFAK 93
AVD L+G V + + V K
Sbjct: 88 AVDNLNGANVLDKTLRVDHVK 108
>gi|68063653|ref|XP_673822.1| Ser/Arg-rich splicing factor [Plasmodium berghei strain ANKA]
gi|56491949|emb|CAH95915.1| Ser/Arg-rich splicing factor, putative [Plasmodium berghei]
Length = 297
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ + F T+ + F+K+G + DV++P D T + RGF FV + +A++A+
Sbjct: 13 SLLIRKLKFNTSPSMVRDKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 77 LDGRVVDGREITVQFAKYG 95
++G +DG I V A+ G
Sbjct: 73 MNGSELDGNRIEVFVAQKG 91
>gi|347834979|emb|CCD49551.1| hypothetical protein [Botryotinia fuckeliana]
Length = 308
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R +++ LFEKYG V I RD T +SRGF FV+ +D+A A +
Sbjct: 80 NLFVTGIHPRLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADAAKEG 139
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 140 LQGEVIEGRTLSIEKAR 156
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL + N+ T DDL LF KYG + DV+IP D T RGFA+V+++ +A+ A+
Sbjct: 12 SLFIRNVPDGTRPDDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQFEDLRDAEDAMYS 71
Query: 77 LDGRVVDGREITVQFAK 93
LD GRE+ ++FA+
Sbjct: 72 LDRTRFYGRELEIEFAQ 88
>gi|109077776|ref|XP_001110036.1| PREDICTED: RNA-binding motif protein, X-linked 2 [Macaca mulatta]
Length = 322
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + + T D+ +F +YG++V++ + RD++TG S+GF F+ Y+
Sbjct: 33 KDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTIL 92
Query: 73 AVDRLDGRVVDGREITV 89
AVD +G V GR I V
Sbjct: 93 AVDNFNGIKVKGRTIRV 109
>gi|378733184|gb|EHY59643.1| hypothetical protein HMPREF1120_07628 [Exophiala dermatitidis
NIH/UT8656]
Length = 296
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T D+ LFEKYG+V I D T +SRGF FV+ ++A+ A +
Sbjct: 69 NLFVTGIHPRLTEADVTRLFEKYGEVESCSIMLDPHTKESRGFGFVKMVTPEQAEAAREG 128
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 129 LQGEVIEGRTLSIEKAR 145
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V + T DL +F +YG++V++ + RD++TG S+GF F+ Y+
Sbjct: 33 KDSAWIFVGGFPYELTEGDLICVFSQYGEIVNINLVRDKKTGKSKGFCFICYEDQRSTIL 92
Query: 73 AVDRLDGRVVDGREITVQFAK 93
AVD +G + GR I V K
Sbjct: 93 AVDNFNGIKIKGRTIRVDHVK 113
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 9 PPDIRD-TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PPD Y L V +I R +DL F++YG + DV++ R + GFAFV Y Y
Sbjct: 4 PPDRAFGGYRLFVGDIGTRVGKNDLEREFDRYGPITDVWVAR-----NPPGFAFVVYMYR 58
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNA 98
++A KAV LDGR++ GR + V+ A+ P
Sbjct: 59 EDADKAVRSLDGRLMCGRRVRVEHARPYPGV 89
>gi|321257332|ref|XP_003193552.1| hypothetical protein CGB_D4310W [Cryptococcus gattii WM276]
gi|317460022|gb|ADV21765.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 253
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ T L LF + GKV V I D + +SRGF FV + +EAQ A+D+
Sbjct: 71 NLHVSGLSRAVTERQLEDLFSQIGKVAKVQIMVDPHSQESRGFGFVMMESREEAQAAIDQ 130
Query: 77 LDGRVVDGREITVQFAKYG 95
L G+ ++G+ ITV A+ G
Sbjct: 131 LSGQNIEGKSITVAHARRG 149
>gi|67593714|ref|XP_665745.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656562|gb|EAL35515.1| hypothetical protein Chro.50251 [Cryptosporidium hominis]
Length = 254
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ +T DDL LFE YG+V D + + +G+SR F FV +EA +A D
Sbjct: 72 TLYVCRLSLKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFVTMGNEEEAARAKDA 131
Query: 77 LDGRVVDGREITVQFAKYG------PNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEH 130
LDG+ + V+ A+ P K Q R ++ +S++ SRS H
Sbjct: 132 LDGKEYQDASLKVETARRAKPYDPTPGEYKGPQYRSIKYNSRTGYYSRS---------SH 182
Query: 131 RDKDYRRRSRSR 142
R +R +RSR
Sbjct: 183 RGNSFRHSTRSR 194
>gi|302505870|ref|XP_003014892.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291178463|gb|EFE34252.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 312
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 29 ADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREIT 88
++DL F +YG +VDV++P D T RGFA+V+++ +A+ A+ LD + + GR+I
Sbjct: 65 SEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIE 124
Query: 89 VQFAK---YGPNAEKIQQGRIV 107
+QFA+ PN K ++GR V
Sbjct: 125 IQFAQGDRKTPNQMKAKEGRNV 146
>gi|194696838|gb|ACF82503.1| unknown [Zea mays]
gi|219888871|gb|ACL54810.1| unknown [Zea mays]
gi|413922157|gb|AFW62089.1| arginine/serine-rich splicing factor 10 isoform 1 [Zea mays]
gi|413922158|gb|AFW62090.1| arginine/serine-rich splicing factor 10 isoform 2 [Zea mays]
gi|413922159|gb|AFW62091.1| arginine/serine-rich splicing factor 10 isoform 3 [Zea mays]
Length = 295
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DDL F K GKV + + D RT +SRGFAFV + A++++
Sbjct: 87 NLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRTKESRGFAFVTMDTLEGARRSIKY 146
Query: 77 LDGRVVDGREITVQFAK 93
L V++GR +TV+ AK
Sbjct: 147 LHRTVLEGRLVTVEKAK 163
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + + T D+ +F +YG+VVD+ +PR++ TG RGFAF+ Y+
Sbjct: 29 KDSAYIFIGGLNYELTEGDVITVFSQYGEVVDIDMPREKSTGKRRGFAFLMYEDQRSTVL 88
Query: 73 AVDRLDGRVVDGREITVQFAK 93
AVD L+G + GR + V +
Sbjct: 89 AVDNLNGAELAGRTLRVDHVQ 109
>gi|226506692|ref|NP_001148693.1| LOC100282309 [Zea mays]
gi|195621452|gb|ACG32556.1| arginine/serine-rich splicing factor 10 [Zea mays]
Length = 295
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DDL F K GKV + + D RT +SRGFAFV + A++++
Sbjct: 87 NLYVTGLSTRVTEDDLEKFFSKEGKVKNCHVVLDPRTKESRGFAFVTMDTLEGARRSIKY 146
Query: 77 LDGRVVDGREITVQFAK 93
L V++GR +TV+ AK
Sbjct: 147 LHRTVLEGRLVTVEKAK 163
>gi|346465793|gb|AEO32741.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L + ++ R T+ DL F K GKV + + D R+ +SRGFAFV + ++A + V
Sbjct: 55 NLYITGLSTRVTSSDLEEYFSKEGKVRECEVVLDPRSRESRGFAFVTMETVEDADRCVKH 114
Query: 77 LDGRVVDGREITVQFA--KYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKD 134
L+ V++GR ITV+ A K G + + RSRS SP YR R+
Sbjct: 115 LNRSVLEGRLITVEKAKRKCGRTPTPGYYYGSRDRRDGGRRRSRSHSP---YRSREREDS 171
Query: 135 YRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNH 176
+R R SR Y +D +R HR R + RS+S NH
Sbjct: 172 NSQRRRELSRSPYAKD----SDRRHRERGKERSSSAASDGNH 209
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SL V N++ R DL LFE+YG + + D T +SRGFAFV Y +A+ ++ +
Sbjct: 109 SLYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQDAEDSLSK 168
Query: 77 LDGRVVDGREITVQFAK 93
L+G + G+EI V+ +K
Sbjct: 169 LNGYDLLGKEIRVEKSK 185
>gi|407920811|gb|EKG13991.1| hypothetical protein MPH_08865 [Macrophomina phaseolina MS6]
Length = 286
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R + +++ LFEKYG V I RD T +SRGF FV+ ++A A +
Sbjct: 73 NLFVTGIHPRLSEEEVTRLFEKYGDVEKCNIMRDPHTKESRGFGFVKMVTPEQADAAKEG 132
Query: 77 LDGRVVDGREITVQFAK 93
L G V++GR ++++ A+
Sbjct: 133 LQGEVIEGRTLSIEKAR 149
>gi|297478612|ref|XP_002690241.1| PREDICTED: uncharacterized protein LOC787762 [Bos taurus]
gi|296484064|tpg|DAA26179.1| TPA: serine-arginine repressor protein (35kDa) (SRrp35)-like [Bos
taurus]
Length = 268
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY-- 66
PP+ SL V N+ T +DL F +YG +VDV+IP D T RGFA+V+Y
Sbjct: 7 PPNT----SLFVRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFY 62
Query: 67 -----ADEAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 FIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 94
>gi|355750033|gb|EHH54371.1| hypothetical protein EGM_15194 [Macaca fascicularis]
Length = 310
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + + T D+ +F +YG++V++ + RD++TG S+GF F+ Y+
Sbjct: 33 KDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTIL 92
Query: 73 AVDRLDGRVVDGREITV 89
AVD +G V GR I V
Sbjct: 93 AVDNFNGIKVKGRTIRV 109
>gi|212534622|ref|XP_002147467.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210069866|gb|EEA23956.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 267
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + + F + D+ +F +YG+ V V + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAYIYIGGLPFDLSEGDIVTIFSQYGEPVHVNLIRDKDTGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRY 126
AVD L G V GR + V +Y E+ ++ + ++ +R
Sbjct: 84 QRSTDLAVDNLGGATVMGRVLRVDHTRYKRKEEEGEEDNVATIMGQNARGARG------- 136
Query: 127 RDEHRDKDYRRRSR 140
DE D + RR+SR
Sbjct: 137 EDEDTDTERRRKSR 150
>gi|348526131|ref|XP_003450574.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 257
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK--- 65
PP+ SL V NI + +DL F +YG +VDV+IP D T RGFA+++Y
Sbjct: 7 PPNT----SLFVRNIADESRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYIQYPLFF 62
Query: 66 --YAD--EAQKAVDRLDGRVVDGREITVQFAK 93
+ D +A+ A+ LD + V GR+I +QFA+
Sbjct: 63 HMFEDVRDAEDALHNLDRKWVCGRQIEIQFAQ 94
>gi|148236671|ref|NP_001080216.1| transformer 2 alpha homolog [Xenopus laevis]
gi|27924195|gb|AAH44990.1| Tra2a-prov protein [Xenopus laevis]
Length = 276
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + V ++ TT D+ +F +YG + V + D+RTG SRGFAFV
Sbjct: 101 HNGSRANPD--PNLCIGVFGLSLYTTERDIREVFSRYGPLAGVNVVYDQRTGRSRGFAFV 158
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +++++A++ DG +DGR I V ++
Sbjct: 159 YFERIEDSREAMEHADGMELDGRRIRVDYS 188
>gi|391345479|ref|XP_003747013.1| PREDICTED: transformer-2 protein homolog beta-like [Metaseiulus
occidentalis]
Length = 242
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+ V ++ T +L F KYG+V DV + D +TG SRGF FV Y+ D+A +A ++
Sbjct: 86 CIGVFGLSIYTNERELRDFFGKYGRVEDVQVVYDAQTGRSRGFGFVYYESEDDAHEAKEK 145
Query: 77 LDGRVVDGREITVQFA 92
+G +DGR+I V F+
Sbjct: 146 ANGLEIDGRKIRVDFS 161
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 6 KSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYK 65
++ P + DT +++ ++ + D L F KYG + + + +DR++G SRG VR+
Sbjct: 98 QAAPKEFIDTNKIIITSLAWSVNDDSLRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFA 157
Query: 66 YADEAQKAVDRLDGRVVDGREITV-QFAKYGPNAEKIQQ 103
+ +KA++ ++G ++GR I V QF AEK ++
Sbjct: 158 TEEAMKKAIEEMNGTELEGRAIAVRQFLPKSQMAEKAKE 196
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
++VL + F L+ F++ G++ D + +R SRGF FV + A+++
Sbjct: 6 VIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNALEK- 64
Query: 78 DGRVVDGREITVQFAKYGP 96
+G DGR I V+ A P
Sbjct: 65 NGAEFDGRTIKVEKATERP 83
>gi|242037183|ref|XP_002465986.1| hypothetical protein SORBIDRAFT_01g049590 [Sorghum bicolor]
gi|241919840|gb|EER92984.1| hypothetical protein SORBIDRAFT_01g049590 [Sorghum bicolor]
Length = 266
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Query: 11 DIRDTYSLLVLNI-TFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
D++ T +L V+N RT D+ FE YGK+ ++ I R FAFV+Y+ +E
Sbjct: 88 DVKPTRTLFVINFDPMRTKVQDIERHFEPYGKIANIRI--------RRNFAFVQYETQEE 139
Query: 70 AQKAVDRLDGRVVDGREITVQFA----------KYGPNAEKIQQGRIVESSSKSKGRSRS 119
A AV D + R +TV++A +YG ++G + + +G
Sbjct: 140 ASAAVKNTDKSTILDRVVTVEYAFRDDDSERDDRYG----SPKRG----AYDRRRGNPYL 191
Query: 120 RSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRG 179
RSP PRYR E+ DY RR R +R D Y + + R +R RS DR+ N GR
Sbjct: 192 RSPSPRYRREY-SPDYDRRGRYPGYDRRDGAMYERRSPVYDRYNRGRSPVYDRY-NRGRS 249
Query: 180 K-YDEERRSRSRSYERY 195
YD R S Y++Y
Sbjct: 250 PVYDGYDRRGSPGYDQY 266
>gi|195504667|ref|XP_002099177.1| GE10772 [Drosophila yakuba]
gi|194185278|gb|EDW98889.1| GE10772 [Drosophila yakuba]
Length = 655
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F +G + + RDR+TGDS +AFV ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEEQKSCEAAYFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIV---------ESSSKSKGRSRSRSPRPRYRD 128
D ++D R I V F++ +GR V ++ +K R + + R R D
Sbjct: 302 DNVLIDDRRIHVDFSQSVSKVTWRGKGRGVVGDYGKLDFDNLRDNKDRRKPNNGRSRRED 361
Query: 129 EHRDK---DYRRRSRSRSRERYDRDRYRSK-ERDHRRRSRSRSASPDRHKNHGRGKYDEE 184
DK D R R S R + R++ + ERD R+ R RS S ++ E+
Sbjct: 362 HKEDKRAEDPRHRMSSAERRKAREQRHQEQSERDDRKNVRGRSRSREKQ---------EQ 412
Query: 185 RRSRSRSYE 193
RSRSR+++
Sbjct: 413 NRSRSRNWQ 421
>gi|193579992|ref|XP_001945585.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like isoform
3 [Acyrthosiphon pisum]
gi|328708407|ref|XP_003243680.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like isoform
2 [Acyrthosiphon pisum]
Length = 472
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 4/171 (2%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T+ DDL +F ++GK+V + RD+++ +S +AFV + + A ++
Sbjct: 240 LFVCKLNPVTSDDDLQIIFSRFGKIVSCEVIRDKKSENSLQYAFVEFDNQKSCEDAYLKM 299
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYRR 137
D ++D R I V F++ + + +GR V+ + K +YR++ RD R
Sbjct: 300 DNVLIDDRRIHVDFSQSVSKIKWLGKGRGVKYTDKDDEGKNISDKYSKYRNKKRDSHVSR 359
Query: 138 RSRSRSRER-YDRDRYRSKERDHR-RRSRSRSASPDRHKNHGRGKYDEERR 186
+ +++ ++ R+R+ ++++R R S P + +GR DE RR
Sbjct: 360 NNYIKNKMSIHESKRHRNDDKNYRYRESEKEERVP--YNKYGRNDKDENRR 408
>gi|307196041|gb|EFN77766.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Harpegnathos saltator]
Length = 451
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP+ L V + T DDL +F ++GK++ + RD +TGDS +AF+ +
Sbjct: 236 APPE----NVLFVCKLNPVTNDDDLEIIFNRFGKIIGCEVIRDHQTGDSLQYAFIEFADR 291
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIV---ESSSKSKGRSRSRSPRP 124
++A ++D ++D R I V F++ +G+ + + K+K + P
Sbjct: 292 KSCEEAYFKMDNVLIDDRRIHVDFSQSVAKMRWRGKGKGIRYFDEDEKTK-KHEENLPSL 350
Query: 125 RYRDEHRDKDY---RRRSRSRSRERYDRDRYRSKERDHRRR 162
R + R +DY + R R +E DRD + SK R H+RR
Sbjct: 351 RRHETSRGRDYDNSKNREEKRKKEHKDRD-HTSKHRKHKRR 390
>gi|307133716|ref|NP_001182514.1| splicing factor, arginine/serine-rich 13B [Macaca mulatta]
gi|402867628|ref|XP_003897943.1| PREDICTED: serine/arginine-rich splicing factor 12 [Papio anubis]
Length = 267
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY-- 66
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+V+Y
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLLF 62
Query: 67 ----ADEAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 IFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 93
>gi|326469216|gb|EGD93225.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326479280|gb|EGE03290.1| U2 snRNP component IST3 [Trichophyton equinum CBS 127.97]
Length = 276
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|322797592|gb|EFZ19633.1| hypothetical protein SINV_07432 [Solenopsis invicta]
Length = 508
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 30/167 (17%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T DDL +F ++GK+V + RD +TGDS +AF+ + + A ++
Sbjct: 260 LFVCKLNPVTNDDDLEIIFSRFGKIVGCEVIRDHQTGDSLQYAFIEFADRKSCEDAYFKM 319
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDE-----HRD 132
D ++D R I V F S S +K R R + +Y DE R+
Sbjct: 320 DNVLIDDRRIHVDF-----------------SQSVAKMRWRGKGKGIKYLDEDDRAKKRE 362
Query: 133 KDY---RRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNH 176
++Y R+R SR DRDR K RD RR S H+ H
Sbjct: 363 ENYFSSRKREASR-----DRDRDNGKGRDEGRRKESDKDRSSEHRKH 404
>gi|41055184|ref|NP_957491.1| transformer-2 protein homolog beta [Danio rerio]
gi|29124601|gb|AAH49051.1| Splicing factor, arginine/serine-rich, 10 [Danio rerio]
Length = 278
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD L V ++ TT DL +F KYG + DV I D+++ SRGFA V
Sbjct: 112 HIGDRANPD--PNCCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFALV 169
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA-KYGPNAEK--IQQGRIVESSSKSKGRSRS 119
++ +++++A +R +G +DGR I V ++ GP+ I GR S R R
Sbjct: 170 YFENREDSKEAKERANGMELDGRRIRVDYSITKGPHTPTPGIYMGRPTYGGGPSVSRRRD 229
Query: 120 RSPR--PRYRDEHRDKDY---RRRSRS 141
R R D + D+DY RRRS S
Sbjct: 230 SYDRGYERGYDSYEDRDYHNNRRRSPS 256
>gi|440634763|gb|ELR04682.1| hypothetical protein GMDG_01540 [Geomyces destructans 20631-21]
Length = 256
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D +DT + + + F+ + D+ +F +YG+ + + RD+ TG+S+GFAF++Y+
Sbjct: 28 DYKDTAYIYIGGLPFQLSEGDIITIFSQYGEPTFINLVRDKETGESKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVE 108
AVD L G + R + V +Y E+ +G +++
Sbjct: 88 DLAVDNLGGTKIMNRVLRVDHTRYKKQDEEPDKGLVLD 125
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 51/90 (56%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I ++ + + N+T+ TT DD+ LFEKYG + +V +P DR T +GF + + + A
Sbjct: 317 IAESGRMFIRNLTYTTTEDDVRKLFEKYGPLSEVDLPIDRMTRKPKGFGTITFLMPEHAV 376
Query: 72 KAVDRLDGRVVDGREITVQFAKYGPNAEKI 101
KA LDG ++DGR + + K + E I
Sbjct: 377 KAYSELDGSILDGRMLHILPGKTKTSLENI 406
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDR-RTGDSRGFAFVRYKYADEAQKAVDR 76
+LV NI F+ T ++ LF+ YG++ V +P+ T RGFAF+ Y +A+KA
Sbjct: 740 ILVRNIPFQATVQEVTELFKSYGELKAVRLPKKLVGTEKHRGFAFIEYYTKSDAKKAFKA 799
Query: 77 L-DGRVVDGREITVQFAKYGPNAEKIQQGRI----VESSSKSKGRSR 118
L + GR + +++A+ E+I++ + E+S+K +S+
Sbjct: 800 LCQSTHLYGRRLVLEWAQTEEGIEEIRKRTVKHFYQENSTKQFKKSK 846
Score = 37.4 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 2 SHFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFI-----PRDRRTGDS 56
+H + P DT +L V NI F TT + L F K G + + I P + S
Sbjct: 621 THKEEDNEPPESDT-TLFVKNINFSTTEEQLKDYFGKCGPLHYITIATKMDPENPAKKLS 679
Query: 57 RGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQ 90
G+ F+RYK +A +A+ L V+DG+ + ++
Sbjct: 680 MGYGFIRYKRKFDADRALKTLQMSVLDGKSLELK 713
>gi|315049793|ref|XP_003174271.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
gi|311342238|gb|EFR01441.1| U2 snRNP component IST3 [Arthroderma gypseum CBS 118893]
Length = 280
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYVYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|353239800|emb|CCA71696.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Piriformospora indica DSM 11827]
Length = 421
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 23/177 (12%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++GK++ I RD+RTGDS +AF+ + +A++A ++
Sbjct: 225 LFVCKLNPVTTDEDLELIFSQHGKIMSCQIIRDKRTGDSLQYAFIEFDRRQDAEQAYFKM 284
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRP------RYRDE-- 129
++D R I V F++ + G V+ + + R R RYR E
Sbjct: 285 QSVLIDDRRIWVDFSQSVSRLNDGKWGNDVKMGPRKRQGGRGLGGRDDLEHTRRYRGEEQ 344
Query: 130 HRDKDYRRRSRSRSRERYDRDRYRSK------ERDHRRRSRSRSASP--DRHKNHGR 178
HRD Y S D D YRS ERD R RSRS SP DR +GR
Sbjct: 345 HRDDQY-------SVLFDDEDHYRSSKRQKRPERDSHYRPRSRSRSPNRDRSSEYGR 394
>gi|134076074|emb|CAK39433.1| unnamed protein product [Aspergillus niger]
Length = 289
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + + + D+ +F +YG+ V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|157889123|dbj|BAF81027.1| transformer-2 [Glandirana rugosa]
Length = 272
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 108 HNGSRANPD--SNMCVGVFGLSLYTTERDLREVFSRYGPLGGVNVVYDQRTGRSRGFAFV 165
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSS 111
++ ++++ A++ +G +DGR I V ++ + P I GR SSS
Sbjct: 166 YFERIEDSRAAMEHANGMELDGRRIRVDYSITKRAHTPTP-GIYMGRPTHSSS 217
>gi|154416377|ref|XP_001581211.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915436|gb|EAY20225.1| hypothetical protein TVAG_021720 [Trichomonas vaginalis G3]
Length = 202
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 14 DTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
+T ++ V N++F TT + L F ++G V+ IP ++G S+GF F+ Y +EA KA
Sbjct: 43 ETITVHVGNLSFETTEESLKIKFSEFGNVISSRIPVRAQSGKSKGFGFIEYATQEEADKA 102
Query: 74 VDRLDGRVVDGREITV 89
+ ++ + +GR I V
Sbjct: 103 IAEMNKKEFEGRTIVV 118
>gi|157278157|ref|NP_001098178.1| transformer 2a [Oryzias latipes]
gi|49204524|dbj|BAD24698.1| transformer-2a2 [Oryzias latipes]
gi|49204534|dbj|BAD24700.1| transformer-2a4 [Oryzias latipes]
Length = 186
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G G PD + L V ++ TT DL +F KYG + +V I D+++ SRGFAFV
Sbjct: 7 HIGNRGNPD--PSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFV 64
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ ++++++A ++ +G +DGR I V F+
Sbjct: 65 YFENSEDSKEAKEQANGMELDGRRIRVDFS 94
>gi|356566197|ref|XP_003551321.1| PREDICTED: uncharacterized protein LOC100808038 [Glycine max]
Length = 364
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T +L F GKV+DV + D T +SRGF FV + +EA++ V
Sbjct: 51 NLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAERCVKY 110
Query: 77 LDGRVVDGREITVQFAK 93
L+ V++GR ITV+ AK
Sbjct: 111 LNRSVLEGRVITVEKAK 127
>gi|302663591|ref|XP_003023436.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187433|gb|EFE42818.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 277
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + F + D+ +F +YG V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPFDISEGDILTIFSQYGNPVHLNLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|322702604|gb|EFY94239.1| U2 snRNP component IST3 [Metarhizium anisopliae ARSEF 23]
Length = 294
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + T D+ +F ++G+ V + + RD+ TG S+GF +++Y+
Sbjct: 12 DYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRST 71
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGP 96
AVD L G + GR I+V A+Y P
Sbjct: 72 DLAVDNLGGADISGRMISVDHARYKP 97
>gi|440912647|gb|ELR62200.1| Heterogeneous nuclear ribonucleoprotein G, partial [Bos grunniens
mutus]
Length = 206
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L + + T L F KYG++ +V + +DR T SRGFAF+ ++ +A+ AV +
Sbjct: 10 LFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDM 69
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRS 119
+G+ +DG+ I V A + GR S+S+GR S
Sbjct: 70 NGKSLDGKAIKVAQA----TKPAFESGRRGPPLSRSRGRGYS 107
>gi|296198765|ref|XP_002746858.1| PREDICTED: serine/arginine-rich splicing factor 12 [Callithrix
jacchus]
Length = 268
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY-- 66
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+V+Y
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFY 62
Query: 67 -----ADEAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 FIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 94
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D +D+ + V +++ + D+ +F +YG+++DV +PRD+ TG ++GF FV Y+
Sbjct: 27 DYKDSAYIFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRST 86
Query: 71 QKAVDRLDGRVVDGREITVQFAK-YGPNAEKIQQGRIVESSSKS 113
AVD L+G V R + V + Y K + G V++ +S
Sbjct: 87 VLAVDNLNGAKVLERTLRVDHVRNYKQPKVKNEDGEWVDAEEQS 130
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
+I ++ + + N+T+ T DD+ LFEKYG + +V +P DR T +GF V + + A
Sbjct: 357 NIAESGRMFIRNLTYTITEDDIRKLFEKYGPLSEVNLPVDRVTRKPKGFGTVTFLMPEHA 416
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSK 112
KA LDG V+DGR + + AK + E I + K
Sbjct: 417 LKAYSELDGTVLDGRMLHILPAKMKASLEDIDMENLTYKQKK 458
Score = 39.3 bits (90), Expect = 0.91, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDR-RTGDSRGFAFVRYKYADEAQKAVDR 76
+LV NI F+ T ++ LF+ YG++ V +P+ T RGF F+ Y +A+KA
Sbjct: 782 ILVRNIPFQATLQEITELFKSYGELKAVRLPKKLVGTEKHRGFGFIEYYTKTDAKKAFKA 841
Query: 77 L-DGRVVDGREITVQFAKYGPNAEKIQQ---GRIVESSSKSKGRSRSRSP 122
L + GR + +++A+ E+I++ R + SS + + + P
Sbjct: 842 LCQSTHLYGRRLVLEWAQAEEGIEEIRKRTAKRFYQESSTKRFKKSTLDP 891
Score = 37.0 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFI-----PRDRRTGDSRGFAFVR 63
PP+ T L V NI F TT + L F K G + + I P + S G+ FVR
Sbjct: 671 PPEPDTT--LFVKNINFSTTEEQLKDYFGKCGPLHYITIATKKDPENPTNKLSMGYGFVR 728
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQ 90
YK +A +A+ L V+DG+ + ++
Sbjct: 729 YKRKHDADRALKTLQMSVLDGKSLELK 755
>gi|114608450|ref|XP_518634.2| PREDICTED: serine/arginine-rich splicing factor 12 [Pan
troglodytes]
Length = 268
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY-- 66
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+V+Y
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQYPLFY 62
Query: 67 -----ADEAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 FIFEDVRDAEDALYNLNRKWVCGRQIEIQFAQ 94
>gi|346322984|gb|EGX92582.1| transformer-SR ribonucleoprotein, putative [Cordyceps militaris
CM01]
Length = 375
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +L V I R + ++ +FEKYG+V I +D + +SRGF FV+ ++A+
Sbjct: 66 INPGSNLFVTGIHPRLSEAEVTKMFEKYGEVEKCQIMKDPHSKESRGFGFVKMVTPEQAE 125
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A + L G V++GR ++++ A+
Sbjct: 126 AAREGLQGEVIEGRTLSIEKAR 147
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V N+ R T ++L LFEK+G++ I D + +SRGFAFV ++ +A AV
Sbjct: 75 NLYVANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDASDAVQE 134
Query: 77 LDGRVVDGREITVQFAK 93
L+G+ + GR + V+ AK
Sbjct: 135 LNGKDIQGRRMRVEHAK 151
>gi|123976178|ref|XP_001314467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896817|gb|EAY01957.1| hypothetical protein TVAG_430980 [Trichomonas vaginalis G3]
Length = 199
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 15 TYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAV 74
T ++ V N++F TT + L F ++G VV IPR RTG S+ F FV + ++A KA+
Sbjct: 34 TVTIHVGNLSFDTTEESLKAKFAEFGNVVTCRIPRRTRTGKSKSFGFVEFSTKEDADKAI 93
Query: 75 DRLDGRVVDGREITVQFA 92
++ + +GR + ++ +
Sbjct: 94 KEMNEKEFEGRTLKIEIS 111
>gi|402082552|gb|EJT77570.1| hypothetical protein GGTG_02676 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R ++ +FEKYG+V I RD T +SRGF FV+ ++A A++
Sbjct: 72 NLFVTGIHPRLVEAEVTRMFEKYGEVEKCQIMRDPHTQESRGFGFVKMVTPEQADAAIEG 131
Query: 77 LDGRVVDGREITVQFAK 93
L G ++GR ++++ A+
Sbjct: 132 LQGEAIEGRTLSIEKAR 148
>gi|195107957|ref|XP_001998560.1| GI24038 [Drosophila mojavensis]
gi|193915154|gb|EDW14021.1| GI24038 [Drosophila mojavensis]
Length = 577
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 27/199 (13%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
+ PP+ L V + TT DDL +F ++G V + RDR+TGDS +AFV +
Sbjct: 233 AEMAPPE----NVLFVCKLNPVTTDDDLEIIFSRFGVVKGCEVIRDRKTGDSLQYAFVEF 288
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGR-IVESSSK--------SKG 115
+ + A ++D ++D R I V F++ +GR +V S+ S G
Sbjct: 289 EDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWRGKGRGVVGDGSQLDFNNLRESNG 348
Query: 116 RSRSRSPRPRYRDEHRDKDYRRRSRSR----SRERYDRDRYRSKERDHRRRSRSRSASPD 171
+ PR R +++ R + RR R R +RE +R +++E+ HR +
Sbjct: 349 KKHESKPRKRGQEDRRGQGDRRIDRKRNDEQNREITSEERRKAREQRHR----------E 398
Query: 172 RHKNHGRGKYDEERRSRSR 190
+ + RG+ + +RSRSR
Sbjct: 399 QREREDRGRRNNTQRSRSR 417
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain
Shintoku]
Length = 267
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
+S LV N+ F TT + FE++GK+ DV++P D T RGF FV Y +A AV
Sbjct: 7 HSTLVRNLRFSTTPQVVREAFERFGKIRDVYLPLDFNTKRPRGFGFVEYYEKSDAVDAVK 66
Query: 76 RLDGRVVDGREITVQFAK 93
+D +DG I A+
Sbjct: 67 AMDNTDLDGSIINCCLAQ 84
>gi|357141252|ref|XP_003572153.1| PREDICTED: scaffold attachment factor B1-like [Brachypodium
distachyon]
Length = 275
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 11 DIRDT-YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
D+R+ +L V ++ R T +L F GKV + + D RT +SRGFAFV ++
Sbjct: 81 DLRNPGNNLYVTGLSTRVTEAELEKFFSTEGKVKNCHVVLDPRTKESRGFAFVSMDTVED 140
Query: 70 AQKAVDRLDGRVVDGREITVQFAK 93
A++ + RL V++GR +TV+ AK
Sbjct: 141 ARRCIKRLHRTVLEGRLVTVEKAK 164
>gi|395512885|ref|XP_003760664.1| PREDICTED: scaffold attachment factor B2 [Sarcophilus harrisii]
Length = 946
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 9/161 (5%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ T A DL LF KYGKVV + + R+ +R + FV +DEA K ++
Sbjct: 417 NLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCINH 476
Query: 77 LDGRVVDGREITVQFAKYGPNAEKI--QQGRIVESSSKSKGRSRSRSPRPR---YRDEHR 131
L + GR I+V+ AK P +K + I + S S R S RP + E R
Sbjct: 477 LHRTELHGRMISVEKAKNEPAGKKPDRKDCEIKKEKSGSGERHHSTDSRPERTVIKSEKR 536
Query: 132 DKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDR 172
D +RS R E+ D D +S D R ++S S +R
Sbjct: 537 DD---KRSEDRKDEK-DYDELKSGSADRSRATKSGSRGTER 573
>gi|291224590|ref|XP_002732284.1| PREDICTED: RNA-binding protein S1, serine-rich domain-like
[Saccoglossus kowalevskii]
Length = 261
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 30 DDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITV 89
D L +F YGKV V + DR T SRGFA++ ++ D+A KA+ +DG +DG+EIT
Sbjct: 135 DHLLEIFSTYGKVKTVELQVDRMTNLSRGFAYIDFENHDDADKAMKHMDGGQIDGQEITA 194
Query: 90 QF 91
Sbjct: 195 AM 196
>gi|351726252|ref|NP_001237888.1| uncharacterized protein LOC100500170 [Glycine max]
gi|255629542|gb|ACU15118.1| unknown [Glycine max]
Length = 238
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G+S P + DT L V ++ R T DL F K GKV F+ + RT SRGFAFV
Sbjct: 62 GRSEPSNPGDT--LYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTM 119
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQ 90
+ A++A++ + L+ V++GR IT++
Sbjct: 120 ESAEDAERCIKYLNQSVLEGRYITIE 145
>gi|225426196|ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
vinifera]
Length = 211
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R A DL F GKVV+ + D RT +SRGF FV + ++A + +
Sbjct: 55 NLYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKY 114
Query: 77 LDGRVVDGREITVQFAK 93
L+ V++GR ITV+ AK
Sbjct: 115 LNRSVLEGRLITVEKAK 131
>gi|46110044|ref|XP_382080.1| hypothetical protein FG01904.1 [Gibberella zeae PH-1]
Length = 342
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +L V I + + ++ +FEKYG V I RD T +SRGF FV+ +D+A+
Sbjct: 70 INPGSNLFVTGIHPKLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQAE 129
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A + L G ++GR ++++ A+
Sbjct: 130 AAKEGLQGEQIEGRTLSIEKAR 151
>gi|302897832|ref|XP_003047724.1| hypothetical protein NECHADRAFT_72372 [Nectria haematococca mpVI
77-13-4]
gi|256728655|gb|EEU42011.1| hypothetical protein NECHADRAFT_72372 [Nectria haematococca mpVI
77-13-4]
Length = 333
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I + T ++ +FEKYG V I RD T +SRGF FV+ +++A+ A +
Sbjct: 75 NLFVTGIHPKLTEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQAEAAKEG 134
Query: 77 LDGRVVDGREITVQFAK 93
L G ++GR ++++ A+
Sbjct: 135 LQGEQIEGRTLSIEKAR 151
>gi|156088129|ref|XP_001611471.1| RNA recognition motif domain containing protein [Babesia bovis]
gi|154798725|gb|EDO07903.1| RNA recognition motif domain containing protein [Babesia bovis]
Length = 271
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T ADDL +F ++G VV + RD +TGDS +AFV ++ D A R+
Sbjct: 52 LFVCKLNPVTEADDLKLIFSRFGPVVSCDVIRDYKTGDSLQYAFVEFESEDSCNDAYFRM 111
Query: 78 DGRVVDGREITVQFAKYGPNAEK--IQQGRIVESSSKSKGRSRSRSP-RPRYRDEHRDKD 134
++D R I V F + K R S + S +SP RP RD D+
Sbjct: 112 QNVLIDDRRIHVDFCQSVSGFWKRFKDNQRFSRISKMAGSTSHRKSPTRPISRDIPGDRT 171
Query: 135 YRR----------RSRSRSRE----RYDRDRY 152
R RSRS S E RY RDRY
Sbjct: 172 VDRSTSGSPGRHQRSRSTSEELKRTRYHRDRY 203
>gi|21355677|ref|NP_651291.1| CG5808 [Drosophila melanogaster]
gi|4972682|gb|AAD34736.1| unknown [Drosophila melanogaster]
gi|7301211|gb|AAF56342.1| CG5808 [Drosophila melanogaster]
gi|220943598|gb|ACL84342.1| CG5808-PA [synthetic construct]
gi|220953568|gb|ACL89327.1| CG5808-PA [synthetic construct]
Length = 653
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 44/218 (20%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP+ L V + TT DDL +F +G + + RDR+TGDS +AFV ++
Sbjct: 236 APPE----NVLFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQ 291
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESS----------------S 111
+ A ++D ++D R I V F++ +GR +E
Sbjct: 292 KSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWRGKGRGIEGDYRKLDFNNLRDDKDHRK 351
Query: 112 KSKGRSRSRSPRPRYRDEHRDKDYRRRSRS---------RSRERYDRD-------RYRSK 155
+ GRSR+ + R R E D+R R S R +E+ +RD R RSK
Sbjct: 352 PNNGRSRTEDHKERNRTE----DFRNRMSSAERRKAREQRHQEQSERDVRKNLQRRTRSK 407
Query: 156 ERDHR---RRSRSRSASPDRHKNHGRGKYDEERRSRSR 190
E+D + R +S++ S + N R + +E+R SRSR
Sbjct: 408 EKDEKSVYRSKKSQNESVRENSNRERNR-NEKRSSRSR 444
>gi|194909374|ref|XP_001981933.1| GG12319 [Drosophila erecta]
gi|190656571|gb|EDV53803.1| GG12319 [Drosophila erecta]
Length = 654
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 94/213 (44%), Gaps = 35/213 (16%)
Query: 8 GPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYA 67
PP+ L V + TT DDL +F +G + + RDR+TGDS +AFV ++
Sbjct: 236 APPE----NVLFVCKLNPVTTDDDLEIIFSSFGMLKGCEVIRDRKTGDSLQYAFVEFEEQ 291
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIV----------------ESSS 111
+ A ++D ++D R I V F++ +GR V +
Sbjct: 292 KSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWRGKGRGVVGDYGKLDFDNLRDNKDHRK 351
Query: 112 KSKGRSRSR---------SPRPRYRDEHRDKDYRRRSRSRSRERYDRD----RYRSKERD 158
+ GRSR+ PR R R K +R + +S ER DR R RS+E+
Sbjct: 352 SNDGRSRTEDHREPKRADDPRNRMSSAERKKAREQRHQEQS-ERDDRKNVRRRTRSREKQ 410
Query: 159 HRRRSRSRS-ASPDRHKNHGRGKYDEERRSRSR 190
+ RSRSR+ + KN R + ER SRSR
Sbjct: 411 EQNRSRSRNWPNGSARKNSDRERIRNERSSRSR 443
>gi|449298839|gb|EMC94854.1| hypothetical protein BAUCODRAFT_149939 [Baudoinia compniacensis UAMH
10762]
Length = 2038
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +L V I R + D++ LFEKYG V I RD T +SRGF FV+ +EA
Sbjct: 1821 INPGSNLFVTGIHPRLSEDEITRLFEKYGAVEKCNIMRDPHTRESRGFGFVKMTTPEEAD 1880
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A D L G V +GR ++++ A+
Sbjct: 1881 AAKDGLQGEVYEGRTLSIEKAR 1902
>gi|268567540|ref|XP_002640022.1| C. briggsae CBR-SIG-7 protein [Caenorhabditis briggsae]
Length = 382
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++GK+ + I RDRR+GDS +AF+ + A ++A ++
Sbjct: 241 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAQSCEQAYSKM 300
Query: 78 DGRVVDGREITVQFAK 93
D ++D R I V F++
Sbjct: 301 DNVLIDDRRIHVDFSQ 316
>gi|302696573|ref|XP_003037965.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
gi|300111662|gb|EFJ03063.1| hypothetical protein SCHCODRAFT_63222 [Schizophyllum commune H4-8]
Length = 309
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G S + +D+ + V + T D+ +F +YG+++D+ +PR++ TG +GFAFV Y
Sbjct: 21 GASWHDEYKDSAYIFVGGLNRELTEGDVITIFSQYGEIMDINMPREKETGKPKGFAFVMY 80
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK-YGPNAEKIQQGRIVESSSKS 113
+ AVD L+G V R + V K Y K ++G V+ +S
Sbjct: 81 EDQRSTVLAVDNLNGSKVAERTLRVDHVKNYKQKRTKNEEGEWVDPEEQS 130
>gi|408391231|gb|EKJ70611.1| hypothetical protein FPSE_09121 [Fusarium pseudograminearum CS3096]
Length = 348
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +L V I + + ++ +FEKYG V I RD T +SRGF FV+ +D+A+
Sbjct: 70 INPGSNLFVTGIHPKLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQAE 129
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A + L G ++GR ++++ A+
Sbjct: 130 AAKEGLQGEQIEGRTLSIEKAR 151
>gi|449434458|ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like,
partial [Cucumis sativus]
Length = 238
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DL F K GKV F+ + RT SRGFAFV D+A + V
Sbjct: 60 TLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKH 119
Query: 77 LDGRVVDGREITVQ 90
L+ +++GR ITV+
Sbjct: 120 LNQSILEGRYITVE 133
>gi|358368597|dbj|GAA85213.1| RNA binding domain protein [Aspergillus kawachii IFO 4308]
Length = 289
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + + + D+ +F +YG+ V + + RD+ TG SRGF F++Y+
Sbjct: 28 DYRDTAYIYIGGLPYDLSEGDIITIFSQYGEPVHINLVRDKETGKSRGFCFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|308500055|ref|XP_003112213.1| CRE-SIG-7 protein [Caenorhabditis remanei]
gi|308268694|gb|EFP12647.1| CRE-SIG-7 protein [Caenorhabditis remanei]
Length = 452
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT +DL +F ++GK+ + I RDRR+GDS +AF+ + ++A ++
Sbjct: 257 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNEKSCEQAFFKM 316
Query: 78 DGRVVDGREITVQFA-------KYGPNAEKIQQGRIVESSSKSKG----RSRSRSPRPR 125
D ++D R I V F+ KY P ++ +++ S + RS +SP PR
Sbjct: 317 DNVLIDDRRIHVDFSQSVSQNYKYKPKSKNVEEPPRRRPQSPPRRPEIKRSHQKSPSPR 375
>gi|317029441|ref|XP_001391597.2| U2 snRNP component ist3 [Aspergillus niger CBS 513.88]
Length = 280
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + + + D+ +F +YG+ V + + RD+ TG SRGFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPYDLSEGDIVTIFSQYGEPVHINLVRDKETGKSRGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G V GR + V +Y
Sbjct: 88 DLAVDNLGGATVLGRVLRVDHVRY 111
>gi|156545479|ref|XP_001606947.1| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Nasonia
vitripennis]
Length = 501
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 29/166 (17%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
+ PP+ L V + T+ DDL +F ++GK+V + RDR+TGDS +AF+ +
Sbjct: 233 AEMAPPE----NVLFVCKLNPVTSDDDLEVIFSRFGKIVGCEVIRDRQTGDSLQYAFIEF 288
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRP 124
++A ++D ++D R I V F S S +K R R +
Sbjct: 289 AERKSCEEAYFKMDNVLIDDRRIHVDF-----------------SQSVAKMRWRGKGKGI 331
Query: 125 RYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASP 170
+Y DE ++ + + +R R D + +R R RS ASP
Sbjct: 332 KYFDEENKEEKKANNAGNNRPRDD--------KRNRERRRSPFASP 369
>gi|449491291|ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
Length = 244
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T DL F K GKV F+ + RT SRGFAFV D+A + V
Sbjct: 66 TLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANRCVKH 125
Query: 77 LDGRVVDGREITVQ 90
L+ +++GR ITV+
Sbjct: 126 LNQSILEGRYITVE 139
>gi|393236038|gb|EJD43589.1| hypothetical protein AURDEDRAFT_185479 [Auricularia delicata
TFB-10046 SS5]
Length = 281
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + N+ T D+ + +YG+V+DV +PRD++TG RGF F+ Y+
Sbjct: 26 KDSAYVYIGNLPRDLTEGDVITIMSQYGEVMDVNLPRDKQTGKIRGFGFLMYEDQRSTVL 85
Query: 73 AVDRLDGRVVDGREITV-QFAKYGPNAEKIQQGRIVESSSKS 113
AVD L+G V R I V + Y EK G +V+ + +S
Sbjct: 86 AVDNLNGAKVLDRTIRVDHVSDYKQPKEKDADGDLVDRAEQS 127
>gi|414075694|ref|YP_006995012.1| RNA-binding protein [Anabaena sp. 90]
gi|413969110|gb|AFW93199.1| RNA-binding protein [Anabaena sp. 90]
Length = 110
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
S+ V N+++ T + L +F++YGKV V +P DR TG RGF FV + +E +KA++
Sbjct: 2 SIYVGNLSYEVTQEGLSEIFKEYGKVKRVQLPTDRETGKVRGFGFVEMESDEEEEKAIEA 61
Query: 77 LDGRVVDGREITVQFAK 93
LDG GR++ V AK
Sbjct: 62 LDGAEWMGRDLKVNKAK 78
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + +++ T D+ +F ++G+ V + + RDR TG S+GF +++Y+
Sbjct: 28 DYRDTAYVYFGGLSYELTEGDVVTIFSQFGEPVFLKLVRDRETGKSKGFGWLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPN 97
AVD L G + GR + V A+Y P+
Sbjct: 88 DLAVDNLGGAEIAGRLVRVDHARYKPH 114
>gi|270014286|gb|EFA10734.1| transformer2, partial [Tribolium castaneum]
Length = 670
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT D+L+ +F KYG + V + D +TG SRGF+FV ++ D+A+ A D+
Sbjct: 157 CLGVFGLSVYTTEDELYHIFSKYGPLERVQVVIDAKTGRSRGFSFVYFENTDDAKVAKDQ 216
Query: 77 LDGRVVDGREITVQFA 92
G ++G+ I V ++
Sbjct: 217 CSGMKINGKNIRVDYS 232
>gi|388854907|emb|CCF51410.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Ustilago hordei]
Length = 557
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T +DDL +F ++GK++ + +D++TGDS +AF+ + D+A++A ++
Sbjct: 265 LFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERAYFKM 324
Query: 78 DGRVVDGREITVQFAK 93
+VD R I V F++
Sbjct: 325 QNVLVDDRRIWVDFSQ 340
>gi|52345542|ref|NP_001004819.1| transformer 2 alpha homolog [Xenopus (Silurana) tropicalis]
gi|49250512|gb|AAH74599.1| transformer-2 alpha [Xenopus (Silurana) tropicalis]
gi|89266999|emb|CAJ81300.1| transformer-2 alpha (tra2a) [Xenopus (Silurana) tropicalis]
Length = 287
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 103 HNGSRANPD--PNICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFV 160
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +++++A++ +G +DGR I V ++
Sbjct: 161 YFERIEDSREAMEHANGMELDGRRIRVDYS 190
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
SLL+ + + T+ + F+K+G + DV++P D T + RGF FV + +A++A+
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKFGAIKDVYLPIDYYTKEPRGFGFVEFYDPKDAEQALKE 72
Query: 77 LDGRVVDGREITVQFAKYG 95
++G +DG I V A+ G
Sbjct: 73 MNGSEIDGNRIEVFVAQKG 91
>gi|356524435|ref|XP_003530834.1| PREDICTED: uncharacterized protein LOC100805126 [Glycine max]
Length = 362
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T +L F GKV+DV + D T +SRGF FV + +EA + V
Sbjct: 49 NLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEADRCVKY 108
Query: 77 LDGRVVDGREITVQFAK 93
L+ V++GR ITV+ AK
Sbjct: 109 LNRSVLEGRVITVEKAK 125
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + + + T D+ +F +YG+++DV +PRD+ TG RGF F+ Y+
Sbjct: 29 KDSAYVFIGGLHVDMTEGDVITIFSQYGEIMDVNLPRDKTTGKQRGFGFLMYEDQRSTVL 88
Query: 73 AVDRLDGRVVDGREITVQFAKY----------GPNAEKIQQG------RIVESSSKSKGR 116
AVD L+G V GR + V + G E +Q I + + +S G
Sbjct: 89 AVDNLNGAQVLGRTLRVDHVQNYKQPKVKGEDGEMEETAEQSLNAKPQMIYDDAEESDGG 148
Query: 117 SRSRSPRPRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRS 165
S S +P D ++R RE R + + KE+ R+R R+
Sbjct: 149 SVSSAPSIDPEDPMASYLLQKR-----REEKARSKGKDKEKSKRKRDRT 192
>gi|440290286|gb|ELP83712.1| ribonucleoprotein, putative [Entamoeba invadens IP1]
Length = 217
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
++ + ++ T + L +FE G V I R+ T S F FV Y +EA+KAVD
Sbjct: 21 TVHIFRLSLHTKDEALQKIFETVGAVTKCIIIREPSTQRSLRFGFVTYNTTEEAKKAVDE 80
Query: 77 LDGRVVDGREITVQFAK 93
L+G+ VDG I V FA+
Sbjct: 81 LNGKEVDGFRIAVDFAR 97
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L+V NI F T ++ LF +G +V V +PR + G RGFAF+ + EA+ A L
Sbjct: 1007 LVVRNIAFEATPKEVQQLFSPHGNIVSVRLPRKQYDGTHRGFAFIEFSTKQEARDAFSAL 1066
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRD 128
G + GR + ++FA+ + E ++Q G R RS R ++ D
Sbjct: 1067 SGTHLYGRRLAMEFAEDDESLETLRQKTQRSMHQSDSGDRRDRSKRIKFDD 1117
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
DI ++ L V N+ + D+L LFE +G + ++ +P D T +GFAF+ + + A
Sbjct: 534 DIGESGRLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKGFAFITFVLPEHA 593
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAE 99
+A LD + GR + V A++ P +
Sbjct: 594 SQAFQNLDNTIFQGRLLHVLPARHKPGTD 622
>gi|363743665|ref|XP_423726.3| PREDICTED: scaffold attachment factor B1 [Gallus gallus]
Length = 914
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+ V + T A DL LF KYGKVV + + R+ +R + FV A+EA K +
Sbjct: 405 NFWVSGLASTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCITH 464
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDK--D 134
L + G+ I+V+ AK P +K + ++SK + S P RDE D+ D
Sbjct: 465 LHKTELHGKIISVEKAKNEPAGKKP----TEKKENESKKETASERPSSSKRDEKCDQKDD 520
Query: 135 YRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDR 172
++ +ER ++D +S D + S+S S +R
Sbjct: 521 SKKAEDKDEKERKEKDEQKSASSDQPKSSKSGSKGTER 558
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + + TT + FE YG + V + D+ TG +G+AF+ Y + + + A +
Sbjct: 139 TLFVARLNYETTESRIKREFESYGPIKRVRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQ 198
Query: 77 LDGRVVDGREITVQF--AKYGPNAEKIQQGRIV--------ESSSKSKGRSR------SR 120
DGR +DGR + V + PN + G + E+S + GR + SR
Sbjct: 199 ADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSR 258
Query: 121 SPRPRYR-DEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRR 161
S PR R D H ++D R +S + R+R +RDR +S+E H R
Sbjct: 259 SEEPRVREDRHGERD-REKSYDKGRDR-ERDREKSREHSHER 298
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V +++ TT + FE YG + V + D+ RG+AF+ Y + + + A +
Sbjct: 142 TLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDINKPRGYAFIEYLHTRDMKAAYKQ 201
Query: 77 LDGRVVDGREITVQF--AKYGPNAEKIQQGRIV--------ESSSKSKGR--SRSRSPRP 124
DGR +DGR + V + PN + G + E + + GR +SRS P
Sbjct: 202 ADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEP 261
Query: 125 RYR-DEHRDKDYRRRSRSRSRERYDRDRYRSKERDH 159
R R D H D+D R SR R R++ DR+R RS+E H
Sbjct: 262 RVREDRHADRD-REISRERGRDK-DRERERSREHSH 295
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 20 VLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDG 79
V N + +DL F +YG +VDV+IP D T RGFA+V+++ +A+ A+ L+
Sbjct: 2 VRNCAGDSRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNR 61
Query: 80 RVVDGREITVQFAK 93
+ V GR+I +QFA+
Sbjct: 62 KWVCGRQIEIQFAQ 75
>gi|328706280|ref|XP_003243050.1| PREDICTED: hypothetical protein LOC100168472 isoform 2
[Acyrthosiphon pisum]
Length = 297
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L + ++ TT L+ +F KYG + + I D ++G SRGF F +K ++A+ A +
Sbjct: 105 CLGIFGLSVYTTEHQLYDIFAKYGSIDKILIIIDAKSGRSRGFGFAYFKKHEDAKVAKEE 164
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V F+
Sbjct: 165 CSGMEIDGRRIRVDFS 180
>gi|189240798|ref|XP_968550.2| PREDICTED: similar to transformer-2 protein A [Tribolium castaneum]
Length = 264
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT D+L+ +F KYG + V + D +TG SRGF+FV ++ D+A+ A D+
Sbjct: 82 CLGVFGLSVYTTEDELYHIFSKYGPLERVQVVIDAKTGRSRGFSFVYFENTDDAKVAKDQ 141
Query: 77 LDGRVVDGREITVQFA 92
G ++G+ I V ++
Sbjct: 142 CSGMKINGKNIRVDYS 157
>gi|93140633|sp|P0C196.1|PPIL4_USTMA RecName: Full=Peptidyl-prolyl cis-trans isomerase-like 4;
Short=PPIase; AltName: Full=Rotamase
Length = 551
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T +DDL +F ++GK++ + +D++TGDS +AF+ + D+A++A ++
Sbjct: 264 LFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDKKDDAERAYFKM 323
Query: 78 DGRVVDGREITVQFAK 93
+VD R I V F++
Sbjct: 324 QNVLVDDRRIWVDFSQ 339
>gi|322709486|gb|EFZ01062.1| transformer-SR ribonucleoprotein, putative [Metarhizium anisopliae
ARSEF 23]
Length = 348
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 7 SGPPD-----IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF 61
SGP D I +L V I R + ++ +FEKYG V I RD + +SRGF F
Sbjct: 77 SGPKDDDDGAINPGSNLFVTGIHPRLSEAEVSKMFEKYGDVEKCQIMRDPHSKESRGFGF 136
Query: 62 VRYKYADEAQKAVDRLDGRVVDGREITVQFAK 93
V+ +++A+ A + L G ++GR ++++ A+
Sbjct: 137 VKMVTSEQAEAAKEGLQGEQIEGRTLSIEKAR 168
>gi|322695665|gb|EFY87469.1| transformer-SR ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 328
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I R T ++ +FEKYG V I RD + +SRGF FV+ +++A+ A +
Sbjct: 76 NLFVTGIHPRLTEAEVSKMFEKYGDVEKCQIMRDPHSKESRGFGFVKMVTSEQAEAAKEG 135
Query: 77 LDGRVVDGREITVQFAK 93
L G ++GR ++++ A+
Sbjct: 136 LQGEQIEGRTLSIEKAR 152
>gi|218198724|gb|EEC81151.1| hypothetical protein OsI_24062 [Oryza sativa Indica Group]
Length = 431
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T +DL+ +F +G V I RD +TGDS FAF+ ++ + ++A +
Sbjct: 244 LFVRELNKVTQDEDLYTIFSHFGSVTSAEIIRDYKTGDSLCFAFIEFEKKEACERAFFMM 303
Query: 78 DGRVVDGREITV-----------QFAKYGPNAEK---IQQGRIVESSSKSKGRSRSRSPR 123
D ++D R I V QF + NA K + G + + R+ ++
Sbjct: 304 DNCLIDDRRIRVDFSQSVSKQWRQFRQSKSNANKDGCFKCGALDLIARDCDQRAEQKNKG 363
Query: 124 PRYRDEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDE 183
P Y +D++ +R R + R +YR + D+RR+S +GR K D
Sbjct: 364 PNYI--LKDENTQRSGNKRRSKHESRSKYRDGDDDYRRQSGG--------SRYGRDKCDG 413
Query: 184 ERRSR 188
ERR R
Sbjct: 414 ERRYR 418
>gi|291510230|gb|ADE10071.1| RRM [Tremella fuciformis]
Length = 326
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
+ T L V ++ RT DL F +YG+V V I D+RT SRGF F+ + ++AQ
Sbjct: 115 VEPTNVLGVFGLSVRTRERDLEDEFARYGEVEKVVIVYDQRTDRSRGFGFITMRTVEDAQ 174
Query: 72 KAVDRLDGRVVDGREITVQFA 92
V++L+G ++ GR + V F+
Sbjct: 175 LCVEKLNGLLLHGRAVRVDFS 195
>gi|162312534|ref|XP_001713104.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|1723533|sp|Q10422.1|YDC1_SCHPO RecName: Full=Uncharacterized RNA-binding protein C25G10.01
gi|159884012|emb|CAB16378.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 297
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V I R D+L +F K+G V V I R+ T SRGF F+ + +EA A+D L
Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162
Query: 78 DGRVVDGREITVQFAK 93
+ + GR + VQ AK
Sbjct: 163 NSQEFYGRVLNVQKAK 178
>gi|148235297|ref|NP_001085979.1| MGC82977 protein [Xenopus laevis]
gi|49118619|gb|AAH73641.1| MGC82977 protein [Xenopus laevis]
Length = 276
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 3 HFGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFV 62
H G PD + V ++ TT DL +F +YG + V + D+RTG SRGFAFV
Sbjct: 101 HNGSRANPD--PNICVGVFGLSLYTTERDLREVFSRYGPLSSVNVVYDQRTGRSRGFAFV 158
Query: 63 RYKYADEAQKAVDRLDGRVVDGREITVQFA 92
++ +++++A++ ++G +DGR++ V ++
Sbjct: 159 YFERMEDSREAMEHVNGMELDGRKLRVDYS 188
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 3/95 (3%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
R SL V NI DDL F ++G V DV+IP D RGFA+++++ +A+
Sbjct: 5 RPNASLFVRNIADNIRPDDLRREFVRFGPVSDVYIPLDYYNRRPRGFAYIQFEDTRDAED 64
Query: 73 AVDRLDGRVVDGREITVQFA---KYGPNAEKIQQG 104
A+ +D + + GR I VQFA + PN + ++G
Sbjct: 65 ALYAMDRKWICGRYIEVQFAAGDRKTPNQMRTKEG 99
>gi|360044342|emb|CCD81889.1| putative rna recognition motif containing protein [Schistosoma
mansoni]
Length = 258
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%)
Query: 13 RDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQK 72
+D+ + V + + T D+ +F +YG++V++ + RD++TG S+GFAFV Y+
Sbjct: 34 KDSAWIYVGGLHYDLTEGDVICVFSQYGEIVNINLVRDKKTGVSKGFAFVCYEDQRSTVL 93
Query: 73 AVDRLDGRVVDGREITV 89
A D L+G + GR I V
Sbjct: 94 ATDNLNGIKLGGRIIRV 110
>gi|402595074|gb|EJW89000.1| splicing factor [Wuchereria bancrofti]
Length = 272
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 11/121 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT DL LF +YG + +V + D TG SRGF FV +K ++A +A +R
Sbjct: 100 CLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIEAKER 159
Query: 77 LDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSRSRSPRP-----RYR 127
+ G +DG +I + ++ + P I G V+S + RS RSP P RYR
Sbjct: 160 VAGTEIDGHKIRIDYSITKRPHTPTP-GIYMG-AVDSRRRGPPRSYRRSPSPYRSYRRYR 217
Query: 128 D 128
D
Sbjct: 218 D 218
>gi|328706282|ref|XP_001944825.2| PREDICTED: hypothetical protein LOC100168472 isoform 1
[Acyrthosiphon pisum]
Length = 297
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L + ++ TT L+ +F KYG + + I D ++G SRGF F +K ++A+ A +
Sbjct: 105 CLGIFGLSVYTTEHQLYDIFAKYGSIDKILIIIDAKSGRSRGFGFAYFKKHEDAKVAKEE 164
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V F+
Sbjct: 165 CSGMEIDGRRIRVDFS 180
>gi|119568946|gb|EAW48561.1| serine-arginine repressor protein (35 kDa), isoform CRA_a [Homo
sapiens]
Length = 262
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAF-VRYKYA 67
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+ V ++
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYLVIFEDV 62
Query: 68 DEAQKAVDRLDGRVVDGREITVQFAK 93
+A+ A+ L+ + V GR+I +QFA+
Sbjct: 63 RDAEDALYNLNRKWVCGRQIEIQFAQ 88
>gi|297852880|ref|XP_002894321.1| hypothetical protein ARALYDRAFT_892123 [Arabidopsis lyrata subsp.
lyrata]
gi|297340163|gb|EFH70580.1| hypothetical protein ARALYDRAFT_892123 [Arabidopsis lyrata subsp.
lyrata]
Length = 201
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G GP + + +LV + DDL F +G++ ++ + DRRTG +G+A + Y
Sbjct: 84 GGRGPQRSIEGWIILVSGVHEEAQEDDLTNAFGDFGEIKNLHLNLDRRTGFVKGYALIEY 143
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFA-KYGPNAE 99
+ +EAQKA+ ++G + + ++V +A GP+AE
Sbjct: 144 EKYEEAQKAISAMNGAELLTQNVSVDWAFSRGPSAE 179
>gi|195628072|gb|ACG35866.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 255
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 11 DIRDTYSLLVLNI-TFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
D++ T +L V+N RT D+ FE YGK+ ++ I R FAFV+Y+ +E
Sbjct: 88 DVKPTRTLFVINFDPIRTKVQDIEKHFEPYGKIANIRI--------RRNFAFVQYETQEE 139
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK--GRSRSRSPRPRYR 127
A AV D + R +TV++A + ++ + I + + + G RSP PRYR
Sbjct: 140 ASAAVKNTDKSTILDRVVTVEYAFRDDDGDRDDRYDIPKQGAYDRRGGSPYMRSPSPRYR 199
Query: 128 DEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRH 173
++ DY RR R R D Y + + R RS + DR+
Sbjct: 200 RDY-GPDYGRRGRYPGYGRRDGAMYERRSPVYDRYGGGRSPAYDRY 244
>gi|108707341|gb|ABF95136.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 347
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ R T DL F G+V+D I D T +SRGF FV EA + L
Sbjct: 45 LYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKYL 104
Query: 78 DGRVVDGREITVQFAK 93
D V++GR ITV+ AK
Sbjct: 105 DRSVLEGRVITVEKAK 120
>gi|108707340|gb|ABF95135.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 346
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ R T DL F G+V+D I D T +SRGF FV EA + L
Sbjct: 44 LYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKYL 103
Query: 78 DGRVVDGREITVQFAK 93
D V++GR ITV+ AK
Sbjct: 104 DRSVLEGRVITVEKAK 119
>gi|322697734|gb|EFY89510.1| U2 snRNP component IST3 [Metarhizium acridum CQMa 102]
Length = 308
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + T D+ +F ++G+ V + + RD+ TG S+GF +++Y+
Sbjct: 28 DYRDTAFIYFGGLPYDLTEGDIITIFSQFGEPVFLKLARDKETGKSKGFGWLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKY 94
AVD L G + GR I+V A+Y
Sbjct: 88 DLAVDNLGGADIGGRMISVDHARY 111
>gi|334326541|ref|XP_001375983.2| PREDICTED: scaffold attachment factor B2 [Monodelphis domestica]
Length = 1181
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ T A DL LF KYGKVV + + R+ +R + FV +DEA K ++
Sbjct: 408 NLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCINH 467
Query: 77 LDGRVVDGREITVQFAKYGPNAEK 100
L + GR I+V+ AK P +K
Sbjct: 468 LHRTELHGRMISVEKAKNEPAGKK 491
>gi|170106173|ref|XP_001884298.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640644|gb|EDR04908.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 212
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 12/160 (7%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGD-SRGFAFVRYKYADEAQKAVDR 76
L V ++ RT DL F ++G+V V I D+R D SRGF F++ ++A + +
Sbjct: 10 LGVFGLSIRTQERDLDEEFSRFGRVEKVTIVYDQRQSDRSRGFGFIKMATVEDATRCIQE 69
Query: 77 LDGRVVDGREITVQFA----KYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRD 132
L+G ++GR I V ++ + P + R G R YRD HRD
Sbjct: 70 LNGVDLNGRRIRVDYSVTDRPHAPTPGEYMGHRRAGGRDSYHGDRRDHRD-SSYRDSHRD 128
Query: 133 KDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDR 172
+D RR R + DRD Y + RD R R RS P R
Sbjct: 129 RDSGRRGGDREK---DRDLYGRENRDWRDR---RSPPPSR 162
>gi|125543223|gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indica Group]
Length = 324
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ R T DL F G+V+D I D T +SRGF FV EA + L
Sbjct: 22 LYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKYL 81
Query: 78 DGRVVDGREITVQFAK 93
D V++GR ITV+ AK
Sbjct: 82 DRSVLEGRVITVEKAK 97
>gi|29893585|gb|AAP06839.1| putative transformer serine/arginine-rich ribonucleoprotein
[Oryza sativa Japonica Group]
gi|125585702|gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group]
Length = 324
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ R T DL F G+V+D I D T +SRGF FV EA + L
Sbjct: 22 LYVTGLSARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEADLCIKYL 81
Query: 78 DGRVVDGREITVQFAK 93
D V++GR ITV+ AK
Sbjct: 82 DRSVLEGRVITVEKAK 97
>gi|187610697|gb|ACD13597.1| transformer-2 protein [Penaeus monodon]
Length = 267
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT L+ +F+K+G + V + D +TG SRGFAFV ++ +A +A +
Sbjct: 109 CLGVFGLSVHTTERQLYTIFDKFGPLEKVQVVLDSKTGKSRGFAFVYFESLKDASEAKNE 168
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V ++
Sbjct: 169 CSGMEIDGRRIRVDYS 184
>gi|332376873|gb|AEE63576.1| unknown [Dendroctonus ponderosae]
Length = 481
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 27/193 (13%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T+ DDL +F ++GK+ + RDR++GDS +AF+ ++ + A ++
Sbjct: 242 LFVCKLNPVTSDDDLEIIFSRFGKIKSCEVIRDRKSGDSLQYAFIEFEEQKACEDAYFKM 301
Query: 78 DGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSR---------SRSPRPRYRD 128
++D R I V F++ + + +GR V + RS+ + + + R
Sbjct: 302 GNVLIDDRRIHVDFSQSVSKVKWLGKGRGVRHYDEKGNRSKLANQDIGNGNYTVKNRSDR 361
Query: 129 EHRDKDYRRRSRSRSRERYDRDRYRSKERD----------HRRRSRSRSASPDRHKNHGR 178
+ D+ RRRSRS R R DR R HR R RS S+ D ++N
Sbjct: 362 DQVDRKERRRSRSPLRHRQDRSPIHDSNRRTKSRRKSRSPHRNRKRSVSSDSDTYEN--- 418
Query: 179 GKYDEERRSRSRS 191
ERR R+ S
Sbjct: 419 -----ERRKRNMS 426
>gi|357120144|ref|XP_003561789.1| PREDICTED: uncharacterized protein LOC100835076 [Brachypodium
distachyon]
Length = 356
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V ++ R T DL F G+V+D I D T +SRGF FV EA + + L
Sbjct: 52 LFVTGLSSRLTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATLKEADRCIKYL 111
Query: 78 DGRVVDGREITVQFAK 93
D V++GR ITV+ AK
Sbjct: 112 DRSVLEGRVITVEKAK 127
>gi|294460169|gb|ADE75667.1| unknown [Picea sitchensis]
Length = 216
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R DL LF + GKVVD I D R+ +SRGF FV + A + V
Sbjct: 64 NLYVTGLSARVVEADLEELFSQEGKVVDCRIVVDPRSRESRGFGFVTMDTLENADRCVKY 123
Query: 77 LDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRYRDEHRDKDYR 136
L+ ++GR ITV+ AK ++ R S R+ + RPR HRD R
Sbjct: 124 LNRSTLEGRIITVEKAKR-------KRARTPTPGSYLGVRA---TVRPRSYGRHRDGSSR 173
Query: 137 RRSRSR----SRER-YDRDRYRSKERDHRR-RSRSRSASP 170
R + SRER YDRDR +RR RSRS SP
Sbjct: 174 RSPQYSPYRGSRERDYDRDRSPYSGPSYRRERSRSPEYSP 213
>gi|319411847|emb|CBQ73890.1| related to Multidomain cyclophilin type peptidyl-prolyl cis-trans
isomerase [Sporisorium reilianum SRZ2]
Length = 543
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 47/76 (61%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + T +DDL +F ++GK++ + +D++TGDS +AF+ + D+A++A ++
Sbjct: 258 LFVCKLNPVTRSDDLELIFSRFGKILSCEVIKDKKTGDSLQYAFIEFDQKDDAERAYFKM 317
Query: 78 DGRVVDGREITVQFAK 93
+VD R I V F++
Sbjct: 318 QNVLVDDRRIWVDFSQ 333
>gi|297678669|ref|XP_002817185.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 12 [Pongo abelii]
Length = 261
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 9 PPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYAD 68
PP+ SL + N+ T +DL F +YG +VDV+IP D T RGFA+V+++
Sbjct: 7 PPNT----SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVR 62
Query: 69 EAQKAVDRLDGRVVDGREITVQFAK 93
+A+ + + V GR+I +QFA+
Sbjct: 63 DAEDXLFITHRKWVCGRQIEIQFAQ 87
>gi|444722153|gb|ELW62853.1| Scaffold attachment factor B2 [Tupaia chinensis]
Length = 924
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ T A DL LF KYGKVV + + R+ +R + FV +DEA K +
Sbjct: 341 NLWVSGLSSTTRATDLKSLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCISH 400
Query: 77 LDGRVVDGREITVQFAKYGPNAEKI 101
L + GR I+V+ AK P +K+
Sbjct: 401 LHRTELHGRMISVEKAKNEPAGKKL 425
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YS L+ N+ F T+ + FEK+GK+ DV++P D T RGF FV + +A AV
Sbjct: 7 YSTLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVR 66
Query: 76 RLDGRVVDGREITVQFAK 93
+D +DG IT A+
Sbjct: 67 AMDNTELDGSVITCCIAQ 84
>gi|224106315|ref|XP_002314126.1| predicted protein [Populus trichocarpa]
gi|222850534|gb|EEE88081.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V ++ R T +L F G V+DV + D T +SRGF FV +EA +
Sbjct: 53 NLYVTGLSPRITKKELEKHFSAEGTVIDVHLVVDPWTRESRGFGFVTMSTVEEADHCIKY 112
Query: 77 LDGRVVDGREITVQFAK 93
LD V++GR ITV+ AK
Sbjct: 113 LDRSVLEGRVITVEKAK 129
>gi|383850030|ref|XP_003700631.1| PREDICTED: uncharacterized protein LOC100880966 [Megachile
rotundata]
Length = 301
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT ++ +F K+G V V + D +TG SRGF FV ++ A++A+ A ++
Sbjct: 139 CLGVFGLSIFTTEQQIYHIFSKHGPVERVQVVFDAKTGRSRGFCFVYFESAEDAKVAREQ 198
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V F+
Sbjct: 199 CTGMEIDGRRIRVAFS 214
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 16 YSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVD 75
YS L+ N+ F T+ + FEK+GK+ DV++P D T RGF FV + +A AV
Sbjct: 7 YSTLLRNLRFSTSPQVVREAFEKFGKIRDVYLPLDFNTRRPRGFGFVEFYDKADALDAVR 66
Query: 76 RLDGRVVDGREITVQFAK 93
+D +DG IT A+
Sbjct: 67 AMDNTELDGSVITCCIAQ 84
>gi|358377715|gb|EHK15398.1| hypothetical protein TRIVIDRAFT_38353 [Trichoderma virens Gv29-8]
Length = 324
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V NI + T +DL LF + G + + + R R+G S G AFV Y+ D+A +AV +
Sbjct: 92 LRVENIHYDLTEEDLDELFRRIGPITKLQL-RYDRSGRSEGVAFVTYESKDDAAEAVRQF 150
Query: 78 DGRVVDGREITVQFAKYGPN----AEKIQQGR-IVESSSKSKGRSRSRSPRPRYRDE 129
DG +G+ I + GP+ + G+ + E S GRSRS SP RY +E
Sbjct: 151 DGANANGQPIRLTVMPSGPSRNPFDTAVMPGKPLSERISAPGGRSRSLSPPRRYDEE 207
>gi|390601583|gb|EIN10977.1| hypothetical protein PUNSTDRAFT_63827 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 315
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 5 GKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
G S + +D+ + + + + T D+ +F +YG+ +DV + RD+ TG S+GFAF+ Y
Sbjct: 40 GASWHDEYKDSAYIYIGGLNYELTEGDIITIFSQYGEPLDVNLVRDKETGKSKGFAFLMY 99
Query: 65 KYADEAQKAVDRLDGRVVDGREITVQFAK-YGPNAEKIQQGRIVESSSKS 113
+ AVD L+G V R + V + Y K + G +V+ +S
Sbjct: 100 EDQRSTVLAVDNLNGAQVLNRTLRVDHVRDYKQKKVKGEDGELVDPEEQS 149
>gi|328770674|gb|EGF80715.1| hypothetical protein BATDEDRAFT_88044 [Batrachochytrium
dendrobatidis JAM81]
Length = 211
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V + T+ L LFEK GK + P R + FAFV YK +AQ A D
Sbjct: 5 TLFVRGFSPDTSTVTLSSLFEKIGKTIRCDFPNRRGPHGASSFAFVEYKDPQDAQDAFDS 64
Query: 77 LDGRVVDGREITVQFAK 93
L+G+ VDG+ + +++AK
Sbjct: 65 LNGKEVDGKSLVIEWAK 81
>gi|189197207|ref|XP_001934941.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980889|gb|EDU47515.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 509
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F + PP+ L V + T +DL +F ++GK++ + RD++TGDS +AF+
Sbjct: 275 FAEVAPPE----NVLFVCKLNPVTQDEDLELIFSRFGKILSCEVIRDKKTGDSLQYAFIE 330
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAK 93
Y + ++A ++DG ++D I V F++
Sbjct: 331 YTNQKDCEQAYFKMDGVLIDDHRIHVDFSQ 360
>gi|340520210|gb|EGR50447.1| predicted protein [Trichoderma reesei QM6a]
Length = 323
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D+R T L V NI + T +DL LF + G + + + DR +G S G AFV Y+ + +A
Sbjct: 85 DVRGT-RLRVENIHYDLTEEDLDELFRRIGPITKLQLRYDR-SGRSEGVAFVTYESSSDA 142
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPN----AEKIQQGR-IVESSSKSKGRSRSRSPRPR 125
+AV + DG +G+ I + GP+ + G+ + E S GRSRS SP R
Sbjct: 143 AEAVRQFDGANANGQPIRLTILSGGPSRNPFDTAVMPGKPLSERISAPGGRSRSLSPHRR 202
Query: 126 YRDE 129
Y +E
Sbjct: 203 YDEE 206
>gi|187610699|gb|ACD13598.1| variant transformer-2 protein [Penaeus monodon]
Length = 262
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT L+ +F+K+G + V + D +TG SRGFAFV ++ +A +A +
Sbjct: 104 CLGVFGLSVHTTERQLYTIFDKFGPLEKVQVVLDSKTGKSRGFAFVYFESLKDASEAKNE 163
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V ++
Sbjct: 164 CSGMEIDGRRIRVDYS 179
>gi|340939091|gb|EGS19713.1| peptidyl-prolyl cis-trans isomerase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 507
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 4 FGKSGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVR 63
F + PP+ L V + TT +DL +F ++GK++ + RDR+TGDS +AF+
Sbjct: 247 FAEVKPPE----NVLFVCKLNPVTTDEDLELIFSRFGKILSCEVIRDRKTGDSLQYAFIE 302
Query: 64 YKYADEAQKAVDRLDGRVVDGREITVQFAK 93
++ ++A ++DG ++D R I V F++
Sbjct: 303 FEDKKSCEEAYFKMDGVLIDDRRIHVDFSQ 332
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 15/158 (9%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V +++ TT + FE YG + V + D+ T RG+AF+ Y + + + A +
Sbjct: 142 TLFVAKLSYETTESRIKREFESYGPIKRVRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQ 201
Query: 77 LDGRVVDGREITVQF--AKYGPNAEKIQQGRIV--------ESSSKSKGR--SRSRSPRP 124
DGR +DGR + V + PN + G + E + + GR +SRS P
Sbjct: 202 ADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQQSRSEEP 261
Query: 125 RYR-DEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRR 161
R R D H D+D R SR R R++ D++R RS+E + R
Sbjct: 262 RVREDRHSDRD-REISRERVRDK-DKERERSREHSNER 297
>gi|158297018|ref|XP_317325.4| AGAP008136-PA [Anopheles gambiae str. PEST]
gi|157014993|gb|EAA12690.4| AGAP008136-PA [Anopheles gambiae str. PEST]
Length = 676
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%)
Query: 18 LLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRL 77
L V + TT DDL +F ++GK+V + RD+ TGDS +AF+ ++ + A ++
Sbjct: 242 LFVCKLNPVTTDDDLQIIFSRFGKIVGCEVIRDKLTGDSLQYAFIEFENQKSCEDAYFKM 301
Query: 78 DGRVVDGREITVQFAK 93
D ++D R I V F++
Sbjct: 302 DNVLIDDRRIHVDFSQ 317
>gi|342879144|gb|EGU80408.1| hypothetical protein FOXB_09084 [Fusarium oxysporum Fo5176]
Length = 345
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 12 IRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
I +L V I + + ++ +FEKYG V I RD T +SRGF FV+ +++A+
Sbjct: 70 INPGSNLFVTGIHPKLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQAE 129
Query: 72 KAVDRLDGRVVDGREITVQFAK 93
A + L G ++GR ++++ A+
Sbjct: 130 AAKEGLQGEQIEGRTLSIEKAR 151
>gi|212722812|ref|NP_001131484.1| uncharacterized protein LOC100192821 [Zea mays]
gi|194691660|gb|ACF79914.1| unknown [Zea mays]
gi|224032781|gb|ACN35466.1| unknown [Zea mays]
gi|413957159|gb|AFW89808.1| arginine/serine-rich splicing factor RSP41 isoform 1 [Zea mays]
gi|413957160|gb|AFW89809.1| arginine/serine-rich splicing factor RSP41 isoform 2 [Zea mays]
gi|413957161|gb|AFW89810.1| arginine/serine-rich splicing factor RSP41 isoform 3 [Zea mays]
Length = 255
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 11 DIRDTYSLLVLNI-TFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADE 69
D++ T +L V+N RT D+ FE YGK+ ++ I R FAFV+Y+ +E
Sbjct: 88 DVKPTRTLFVINFDPIRTKVQDIEKHFEPYGKIANIRI--------RRNFAFVQYETQEE 139
Query: 70 AQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSK--GRSRSRSPRPRYR 127
A AV D + R +TV++A + ++ + I + + + G RSP PRYR
Sbjct: 140 ASAAVKNTDKSTILDRVVTVEYAFRDDDGDRDDRYDIPKQGAYDRRGGSPYMRSPSPRYR 199
Query: 128 DEHRDKDYRRRSRSRSRERYDRDRYRSKERDHRRRSRSRSASPDRHKNHGRGKYDE 183
++ DY RR R R D Y + + R RS + DR+ YD+
Sbjct: 200 RDYV-PDYGRRGRYPGYGRRDGAMYERRSPVYDRYGGGRSPAYDRYDRRRSPGYDQ 254
>gi|303320035|ref|XP_003070017.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109703|gb|EER27872.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320034356|gb|EFW16301.1| U2 snRNP component IST3 [Coccidioides posadasii str. Silveira]
Length = 271
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Query: 7 SGPPDIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKY 66
S D RDT + + + + + D+ +F ++G+ V + + RD+ TG S+GFAF++Y+
Sbjct: 24 SWHADYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPVHLNLVRDKDTGKSKGFAFLKYED 83
Query: 67 ADEAQKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPRY 126
AVD L G V GR + V +Y E+ + I ++ + R R R
Sbjct: 84 QRSTDLAVDNLCGATVMGRLLRVDHMRYKRKEEEGLEDNI--AALDKEELERQRGGRDHD 141
Query: 127 RDEH 130
RD H
Sbjct: 142 RDHH 145
>gi|340721187|ref|XP_003399006.1| PREDICTED: hypothetical protein LOC100646189 [Bombus terrestris]
gi|350399376|ref|XP_003485504.1| PREDICTED: hypothetical protein LOC100743964 [Bombus impatiens]
Length = 280
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
L V ++ TT + +F KYG V V + D +TG SRGF FV ++ +++A+ A ++
Sbjct: 139 CLGVFGLSIFTTEQQIHHIFSKYGPVERVQVVIDAKTGRSRGFCFVYFESSEDAKVAKEQ 198
Query: 77 LDGRVVDGREITVQFA 92
G +DGR I V F+
Sbjct: 199 CTGMDIDGRRIRVDFS 214
>gi|396467513|ref|XP_003837957.1| hypothetical protein LEMA_P120040.1 [Leptosphaeria maculans JN3]
gi|312214522|emb|CBX94513.1| hypothetical protein LEMA_P120040.1 [Leptosphaeria maculans JN3]
Length = 1476
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 17 SLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAVDR 76
+L V I T +++ LFEKYG+V I RD T +SRGF FV+ +D+A A +
Sbjct: 1248 NLFVTGIHPSLTEEEVTRLFEKYGEVEQCNIMRDPHTKESRGFGFVKMVTSDQADAAKEG 1307
Query: 77 LDGRVVDGREITVQFAK 93
L G V GR ++++ A+
Sbjct: 1308 LQGEVHQGRTLSIEKAR 1324
>gi|258570729|ref|XP_002544168.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
gi|237904438|gb|EEP78839.1| U2 snRNP component IST3 [Uncinocarpus reesii 1704]
Length = 263
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%)
Query: 11 DIRDTYSLLVLNITFRTTADDLFPLFEKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEA 70
D RDT + + + + + D+ +F ++G+ V + + RD+ TG S+GFAF++Y+
Sbjct: 28 DYRDTAYIYIGGLPYDLSEGDILTIFSQFGEPVHLNLVRDKETGKSKGFAFLKYEDQRST 87
Query: 71 QKAVDRLDGRVVDGREITVQFAKYGPNAEKIQQGRIVESSSKSKGRSRSRSPRPR 125
AVD L G + GR + V +Y E+ + I + + + R R R R
Sbjct: 88 DLAVDNLCGANIMGRLLRVDHMRYKRKEEEGLEDNIALLEKEEQEKERDRPSRDR 142
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,089,036,005
Number of Sequences: 23463169
Number of extensions: 124235475
Number of successful extensions: 1245776
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 24631
Number of HSP's successfully gapped in prelim test: 19930
Number of HSP's that attempted gapping in prelim test: 690619
Number of HSP's gapped (non-prelim): 264809
length of query: 195
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 60
effective length of database: 9,191,667,552
effective search space: 551500053120
effective search space used: 551500053120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)