BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029304
(195 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E +MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 130 DIDGDGQVNYEEFVQMMTA 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 370 LTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 429
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 430 DIDGDGQVNYEEFVQMMTA 448
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF EF MM
Sbjct: 360 GNGTIDFPEFLTMM 373
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 336 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 395
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 396 DIDGDGQVNYEEFVQMMTA 414
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
N++ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 266 NSRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 325
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF EF MM
Sbjct: 326 GNGTIDFPEFLTMM 339
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 129 DIDGDGQVNYEEFVTMMTA 147
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 370 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 429
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 430 DIDGDGQVNYEEFVQMMTA 448
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF EF MM
Sbjct: 360 GNGTIDFPEFLTMM 373
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 370
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 371 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 430
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 431 DIDGDGQVNYEEFVQMMTA 449
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 301 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 360
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF EF MM
Sbjct: 361 GNGTIDFPEFLTMM 374
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 273 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 332
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 333 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 392
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 393 DIDGDGQVNYEEFVQMMTA 411
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 263 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 322
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF EF MM
Sbjct: 323 GNGTIDFPEFLTMM 336
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 276 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 335
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 336 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 395
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 396 DIDGDGQVNYEEFVQMMTA 414
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 266 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 325
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF EF MM
Sbjct: 326 GNGTIDFPEFLTMM 339
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 370 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 429
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 430 DIDGDGQVNYEEFVQMMTA 448
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF EF MM
Sbjct: 360 GNGTIDFPEFLTMM 373
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 369 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 428
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 429 DIDGDGQVNYEEFVQMMTA 447
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DGDGTID
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 170 FEEFKVMMTAGSRY 183
F EF MM +Y
Sbjct: 365 FPEFLTMMARKMKY 378
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 369
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 370 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 429
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 430 DIDGDGQVNYEEFVQMMTA 448
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 164 GDGTIDFEEFKVMMTAGSRY 183
G+GTIDF EF MM +Y
Sbjct: 360 GNGTIDFPEFLTMMARKMKY 379
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 15 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 74
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 75 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 134
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 135 DIDGDGQVNYEEFVQMMTA 153
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 11 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 70
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 71 FPEFLTMM 78
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 129 DIDGDGQVNYEEFVQMMTA 147
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 13 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 72
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 73 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 132
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 133 DIDGDGQVNYEEFVQMMTA 151
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 9 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 68
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 69 FPEFLTMM 76
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 67 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 126
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 127 DIDGDGQVNYEEFVQMMTA 145
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 369 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 428
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 429 DIDGDGQVNYEEFVQMMTA 447
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DGDGTID
Sbjct: 305 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 364
Query: 170 FEEFKVMMTAGSRY 183
F EF MM +Y
Sbjct: 365 FPEFLTMMARKMKY 378
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 310 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 369
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 370 LTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 429
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 430 DIDGDGQVNYEEFVQMMTA 448
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 53/80 (66%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 359
Query: 164 GDGTIDFEEFKVMMTAGSRY 183
GDGTIDF EF MM +Y
Sbjct: 360 GDGTIDFPEFLTMMARKMKY 379
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 65 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 124
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 125 DIDGDGQVNYEEFVQMMTA 143
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 61 FPEFLTMM 68
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 309 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 368
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 369 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 428
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 429 DIDGDGQVNYEEFVQMMTA 447
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD D
Sbjct: 299 NTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 358
Query: 164 GDGTIDFEEFKVMM 177
GDGTIDF EF MM
Sbjct: 359 GDGTIDFPEFLTMM 372
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 11 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 70
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 71 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 130
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 131 DIDGDGQVNYEEFVQMMTA 149
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 7 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 66
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 67 FPEFLTMM 74
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 130 DIDGDGQVNYEEFVQMMTA 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 129 DIDGDGQVNYEEFVQMMTA 147
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 66 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 125
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 126 DIDGDGQVNYEEFVQMMTA 144
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 2 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 62 FPEFLTMM 69
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 130 DIDGDGQVNYEEFVQMMTA 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 130 DIDGDGQVNYEEFVQMMTA 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 67 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 126
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 127 DIDGDGQVNYEEFVQMMTA 145
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 130 DIDGDGQVNYEEFVQMMTA 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 129 DIDGDGQVNYEEFVQMMTA 147
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 129 DIDGDGQVNYEEFVQMMTA 147
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DGDGTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 111 bits (277), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 130 DIDGDGQVNYEEFVQMMTA 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 301 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF 360
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 361 LIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 420
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMTA
Sbjct: 421 DIDGDGQVNYEEFVQMMTA 439
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DGDGTID
Sbjct: 297 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 356
Query: 170 FEEFKVMM 177
F EF +MM
Sbjct: 357 FPEFLIMM 364
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMT+
Sbjct: 129 DIDGDGQVNYEEFVTMMTS 147
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMT+
Sbjct: 130 DIDGDGQVNYEEFVTMMTS 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 81/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMT
Sbjct: 130 DIDGDGQVNYEEFVTMMTT 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRES 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMT+
Sbjct: 130 DIDGDGQVNYEEFVTMMTS 148
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L + + + E LK+AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEF-KVMM 177
D DGDG +++EEF +VMM
Sbjct: 129 DVDGDGQVNYEEFVQVMM 146
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTIDF
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 172 EFKVMM 177
EF +M
Sbjct: 67 EFLNLM 72
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 109 bits (273), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 6 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L + + + E LK+AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 66 LNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 125
Query: 161 DCDGDGTIDFEEF-KVMM 177
D DGDG +++EEF +VMM
Sbjct: 126 DVDGDGQVNYEEFVQVMM 143
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L + + + E LK+AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEF-KVMM 177
D DGDG +++EEF +VMM
Sbjct: 129 DVDGDGQVNYEEFVQVMM 146
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTIDF
Sbjct: 7 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 172 EFKVMM 177
EF +M
Sbjct: 67 EFLNLM 72
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
+ DGDG +++EEF MMTA
Sbjct: 129 NIDGDGQVNYEEFVQMMTA 147
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 81/138 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 8 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 67
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 68 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 127
Query: 161 DCDGDGTIDFEEFKVMMT 178
D DGDG +++EEF MMT
Sbjct: 128 DIDGDGQVNYEEFVQMMT 145
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 4 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 63
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 64 FPEFLTMM 71
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 109 bits (273), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 81/138 (58%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 7 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 66
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 67 LTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREA 126
Query: 161 DCDGDGTIDFEEFKVMMT 178
D DGDG +++EEF MMT
Sbjct: 127 DIDGDGQVNYEEFVQMMT 144
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 63 FPEFLTMM 70
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 83/139 (59%), Gaps = 2/139 (1%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + +E E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LTMMARKMKDSE--EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 126
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF MMT+
Sbjct: 127 DIDGDGQVNYEEFVTMMTS 145
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 107 bits (267), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L + + + E LK+AF V+D D NG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEF-KVMM 177
D DGDG I++EEF KVMM
Sbjct: 130 DVDGDGQINYEEFVKVMM 147
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 5 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 64
Query: 101 XXL---NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ K DS E+ ++AF V+D DGNG I+A EL V+ +LG+ T E MI
Sbjct: 65 LTMMARKMKDTDSEEI----REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMI 120
Query: 158 RGVDCDGDGTIDFEEFKVMMTA 179
R + DGDG +++EEF MMTA
Sbjct: 121 REANIDGDGQVNYEEFVQMMTA 142
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 61 FPEFLTMM 68
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVRE 86
D E+R+ F FD +G+G ISA+EL ++T+LG T+EE+ +M+RE
Sbjct: 76 DSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIRE 122
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L + + + E LK+AF V+D D NG I+A EL V+ +LG+ T E MIR
Sbjct: 70 LNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Query: 161 DCDGDGTIDFEEF-KVMM 177
D DGDG I+++EF KVMM
Sbjct: 130 DVDGDGQINYDEFVKVMM 147
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L + + + E L +AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG I++EEF MM +
Sbjct: 129 DIDGDGHINYEEFVRMMVS 147
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AF+++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF +M
Sbjct: 65 FPEFLSLM 72
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L + + + E L +AF V+D DGNG I+A EL V+ +LG+ T E MIR
Sbjct: 69 LSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG I++EEF MM +
Sbjct: 129 DIDGDGHINYEEFVRMMVS 147
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AF+++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF +M
Sbjct: 65 FPEFLSLM 72
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + ++ F FD +GDG I+ EL +++ SL TEEELQ M+ E+DA
Sbjct: 9 IVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L K V + E LK+AF V+D D NG I+A EL V+ +LG+ T E +MI+
Sbjct: 69 LSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEA 128
Query: 161 DCDGDGTIDFEEF-KVMMTA 179
D DGDG +++EEF K+MMT
Sbjct: 129 DLDGDGQVNYEEFVKMMMTV 148
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E + + K+AF ++D DG+G IT EEL V+RSL + T E + MI VD DG+GTI+
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 170 FEEFKVMM 177
F+EF +M
Sbjct: 65 FDEFLSLM 72
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 79/139 (56%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ +LG+++ SLG TE ELQ M+ E+ A
Sbjct: 310 IAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQF 369
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+ DGNG I+A +L V+ +LG+ T E MIR
Sbjct: 370 LTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREA 429
Query: 161 DCDGDGTIDFEEFKVMMTA 179
DGDG +++E+F MMTA
Sbjct: 430 GIDGDGQVNYEQFVQMMTA 448
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%)
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD 163
NT+ + E + K+AFS++D DG+G IT ++L V+RSLG + T AE + MI V D
Sbjct: 300 NTRDQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGAD 359
Query: 164 GDGTIDFEEFKVMM 177
G+GTIDF +F MM
Sbjct: 360 GNGTIDFPQFLTMM 373
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 75/139 (53%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG++ SLG TE ELQ + E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + E +++AF V+D DGNG I+A EL V +LG+ T E + IR
Sbjct: 70 LTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREA 129
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF TA
Sbjct: 130 DIDGDGQVNYEEFVQXXTA 148
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V RSLG + T AE + I VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 65
Query: 170 FEEF 173
F EF
Sbjct: 66 FPEF 69
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 76/133 (57%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
V E ++ F+ FD +GDG I+ ELG+++ SLG TE EL+ M+ EID
Sbjct: 9 VTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + E +++AF V+D DGNG ++A EL V+ LG+ + E MIR
Sbjct: 69 LGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAA 128
Query: 161 DCDGDGTIDFEEF 173
D DGDG +++EEF
Sbjct: 129 DTDGDGQVNYEEF 141
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G IT EL V+RSLG + T AE R M+ +D DG+GT+D
Sbjct: 5 TEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVD 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLGMM 72
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 96.7 bits (239), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 74/139 (53%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG++ SLG TE ELQ + E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + E +++AF V+D DGNG I+A EL V +LG+ T E IR
Sbjct: 69 LTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF TA
Sbjct: 129 DIDGDGQVNYEEFVQXXTA 147
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V RSLG + T AE + I VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTID 64
Query: 170 FEEF 173
F EF
Sbjct: 65 FPEF 68
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 74/139 (53%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F+ FD +GDG I+ ELG++ SLG TE ELQ + E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + E +++AF V+D DGNG I+A EL V +LG+ T E IR
Sbjct: 69 LTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREA 128
Query: 161 DCDGDGTIDFEEFKVMMTA 179
D DGDG +++EEF TA
Sbjct: 129 DIDGDGQVNYEEFVQXXTA 147
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V RSLG + T AE + I VD DG+GTI+
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTIN 64
Query: 170 FEEF 173
F EF
Sbjct: 65 FPEF 68
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F +FD G GKI+ ELG+++ +LG TE ELQ ++ E +
Sbjct: 9 IAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ K + + E +++AF ++D DG+G I+ EL V+ +LG+ T E MIR
Sbjct: 69 CGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA 128
Query: 161 DCDGDGTIDFEEFKVMMT 178
D DGDG I++EEF M++
Sbjct: 129 DFDGDGMINYEEFVWMIS 146
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + KDAF +D +G G I EL ++R+LG + T AE + +I + + +G ++
Sbjct: 5 TEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLN 64
Query: 170 FEEFKVMMTAGSR 182
F EF +M R
Sbjct: 65 FTEFCGIMAKQMR 77
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F FD + +G IS+SEL +++ SLG + +E E+ ++ EID
Sbjct: 10 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L ++ + S + + L +AF V+D +G+G I+A EL VL S+G+ T AE M+R V
Sbjct: 70 LALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV 129
Query: 161 DCDGDGTIDFEEFKVMMTAGS 181
DG G I+ ++F +++ GS
Sbjct: 130 -SDGSGEINIQQFAALLSKGS 149
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AF+++D D NGSI++ EL V+RSLG + AE ++ +D DG+ I+F
Sbjct: 8 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 67
Query: 172 EFKVMMT 178
EF +M+
Sbjct: 68 EFLALMS 74
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F FD + +G IS+SEL +++ SLG + +E E+ ++ EID
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L ++ + S + + L +AF V+D +G+G I+A EL VL S+G+ T AE M+R V
Sbjct: 69 LALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV 128
Query: 161 DCDGDGTIDFEEFKVMMT 178
DG G I+ ++F +++
Sbjct: 129 -SDGSGEINIQQFAALLS 145
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AF+++D D NGSI++ EL V+RSLG + AE ++ +D DG+ I+F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 172 EFKVMMT 178
EF +M+
Sbjct: 67 EFLALMS 73
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F FD + G ISASEL +++ SLG + +E E+ ++ EID
Sbjct: 10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEF 69
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
L ++ + + + L +AF V+D +G+G I+A EL VL S+G+ T AE M+R V
Sbjct: 70 LALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV 129
Query: 161 DCDGDGTIDFEEFKVMMT 178
DG G I+ ++F +++
Sbjct: 130 -SDGSGEINIKQFAALLS 146
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AF+++D D +GSI+A EL V+RSLG + AE ++ +D DG+ I+F
Sbjct: 8 EQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFS 67
Query: 172 EFKVMMT 178
EF +M+
Sbjct: 68 EFLALMS 74
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXX--XXXXXXXXX 100
++++ F FD + DGK+S ELGS L SLG T EL + +++A
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKTVYR 65
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ T S E++ DAF D +GNG+I EL Q+L +LGD T +E +++ V
Sbjct: 66 KPIKTPTEQSKEML----DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEV 121
Query: 161 DCDGDGTIDFEEFKVMMTAG 180
GDG I++E F M+ G
Sbjct: 122 SVSGDGAINYESFVDMLVTG 141
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRG 159
+ +++ F ++D D +G ++ EEL LRSLG + T AE I+G
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAEL-NTIKG 48
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L+D F ++D + +G I EEL ++LR+ G+ T + ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 138
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG IDF+EF MM
Sbjct: 139 KDSDKNNDGRIDFDEFLKMM 158
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 170 FEEFKVMM 177
FEEF VMM
Sbjct: 75 FEEFLVMM 82
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L + F ++D + +G I AEEL ++ R+ G+ T E ++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLM 135
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG IDF+EF MM
Sbjct: 136 KDGDKNNDGRIDFDEFLKMM 155
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG T E +I VD DG GTID
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 170 FEEFKVMMT 178
FEEF VMM
Sbjct: 72 FEEFLVMMV 80
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 16 IAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L + F ++D + +G I AEEL ++ R+ G+ T E ++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLM 135
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG IDF+EF MM
Sbjct: 136 KDGDKNNDGRIDFDEFLKMM 155
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 42/69 (60%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG T E +I VD DG GTID
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTID 71
Query: 170 FEEFKVMMT 178
FEEF VMM
Sbjct: 72 FEEFLVMMV 80
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L D F ++D + +G I EEL ++LR+ G+ T + ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 138
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG IDF+EF MM
Sbjct: 139 KDSDKNNDGRIDFDEFLKMM 158
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 170 FEEFKVMM 177
FEEF VMM
Sbjct: 75 FEEFLVMM 82
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXX 99
++ ELR+ F +FD + DG I+ +LG+ + ++G+ TE EL ++ ++I+
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 100 XXXLNTKGV--DSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRS-LGDDCTLAECR 154
L + ++A+++ + L+DAF +D +G+G I+ EL + +R+ LG +
Sbjct: 69 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIE 128
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMT 178
+IR VD +GDG +DFEEF MM+
Sbjct: 129 EIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXX 101
E+R+ F+ FDA+G G I EL + +LG +EE++KM+ EID
Sbjct: 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 102 XLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVD 161
+ T+ + + E + AF ++D D G I+ + L +V + LG++ T E + MI D
Sbjct: 66 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 125
Query: 162 CDGDGTIDFEEFKVMM 177
DGDG + +EF +M
Sbjct: 126 RDGDGEVSEQEFLRIM 141
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + +++AF ++D DG G+I +EL +R+LG + E ++MI +D +G G ++
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 170 FEEFKVMMT 178
F +F +MT
Sbjct: 61 FGDFLTVMT 69
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 152 ECRRMIRGVDCDGDGTIDFEEFKVMMTA 179
E R D DG GTID +E KV M A
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRA 34
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 5/144 (3%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXX 99
++ ELR+ F +FD + DG I+ +LG+ + ++G+ TE EL ++ ++I+
Sbjct: 23 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 82
Query: 100 XXXLNTKGV--DSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRS-LGDDCTLAECR 154
L + ++A+++ + L+DAF +D +G+G I+ EL + +R LG +
Sbjct: 83 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIE 142
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMT 178
+IR VD +GDG +DFEEF MM+
Sbjct: 143 EIIRDVDLNGDGRVDFEEFVRMMS 166
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXX 101
E+R+ F+ FD +G G I A EL + +LG +EE++KM+ +ID
Sbjct: 8 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFL 67
Query: 102 XLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVD 161
+ T + + E + AF ++D D G I+ + L +V + LG++ T E + MI D
Sbjct: 68 QMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEAD 127
Query: 162 CDGDGTIDFEEFKVMMTAGSRY 183
DGDG ++ EEF +M S +
Sbjct: 128 RDGDGEVNEEEFFRIMKKTSLF 149
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + +++AF ++D DG+G+I A+EL +R+LG + E ++MI +D DG GTID
Sbjct: 3 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 170 FEEFKVMMTA 179
FEEF MMTA
Sbjct: 63 FEEFLQMMTA 72
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 82/144 (56%), Gaps = 5/144 (3%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXX 99
++ ELR+ F +FD + DG I+ +LG+ + ++G+ TE EL ++ ++I+
Sbjct: 9 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDD 68
Query: 100 XXXLNTKGV--DSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRS-LGDDCTLAECR 154
L + ++A+++ + L+DAF +D +G+G I+ EL + +R LG +
Sbjct: 69 FVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIE 128
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMT 178
+IR VD +GDG +DFEEF MM+
Sbjct: 129 EIIRDVDLNGDGRVDFEEFVRMMS 152
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXX 101
E+R+ F+ FD +G G I A EL + +LG +EE++KM+ EID
Sbjct: 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 87
Query: 102 XLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVD 161
+ T + + E + AF ++D D +G+IT ++L +V + LG++ T E + MI D
Sbjct: 88 TMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEAD 147
Query: 162 CDGDGTIDFEEFKVMMTAGSRY 183
+ D ID +EF +M S +
Sbjct: 148 RNDDNEIDEDEFIRIMKKTSLF 169
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + +++AF ++D DG+G+I A+EL +R+LG + E ++MI +D DG GTID
Sbjct: 23 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 170 FEEFKVMMTA 179
FEEF MMTA
Sbjct: 83 FEEFLTMMTA 92
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DGDGTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L + F ++D + +G I EEL ++LR+ G+ T + ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 138
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG IDF+EF MM
Sbjct: 139 KDSDKNNDGRIDFDEFLKMM 158
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 170 FEEFKVMM 177
FEEF VMM
Sbjct: 75 FEEFLVMM 82
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 16 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L + F ++D + +G I EEL ++LR+ G+ T + ++
Sbjct: 76 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLM 135
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG IDF+EF MM
Sbjct: 136 KDSDKNNDGRIDFDEFLKMM 155
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 12 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 71
Query: 170 FEEFKVMM 177
FEEF VMM
Sbjct: 72 FEEFLVMM 79
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 50/74 (67%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS+YD DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMMTAGSRY 183
F EF MM +Y
Sbjct: 65 FPEFLTMMARIMKY 78
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ +D +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDA 57
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 66 FPEFLTMM 73
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 58
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 48/68 (70%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + K+AFS++D DG+G+IT +EL V+RSLG + T AE + MI VD DG+GTID
Sbjct: 5 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
Query: 170 FEEFKVMM 177
F EF MM
Sbjct: 65 FPEFLTMM 72
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L + F ++D + +G I EEL ++LR+ G+ + ++
Sbjct: 79 LVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLM 138
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG IDF+EF MM
Sbjct: 139 KDSDKNNDGRIDFDEFLKMM 158
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 170 FEEFKVMMT 178
FEEF VMM
Sbjct: 75 FEEFLVMMV 83
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 41 VHELRQVFNKFDA-NGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXX 99
V L F F+ G G++S ++G IL LG T+ +++++ E D
Sbjct: 12 VKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDS 71
Query: 100 XXXLNTK----GVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRR 155
+ + V+ ++ + L++AF +YD +GNG I+ + + ++L L + + +
Sbjct: 72 FKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDA 131
Query: 156 MIRGVDCDGDGTIDFEEFKVMMTAG 180
MI +D DG GT+DFEEF +MT G
Sbjct: 132 MIDEIDADGSGTVDFEEFMGVMTGG 156
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR D DGDG +++EEF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 175 VMMTA 179
MMTA
Sbjct: 62 QMMTA 66
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F FD +G+G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 48
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + +++AF ++D DG+G+I A+EL +R+LG + E ++MI +D DG GTID
Sbjct: 25 TEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 170 FEEFKVMMTA 179
FEEF MMTA
Sbjct: 85 FEEFLTMMTA 94
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F+ FD +G G I A EL + +LG +EE++KM+ EID
Sbjct: 30 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEID 76
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR D DGDG +++EEF
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 175 VMMTA 179
MMTA
Sbjct: 69 QMMTA 73
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F FD +G+G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 55
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR D DGDG +++EEF
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 175 VMMTA 179
MMTA
Sbjct: 68 QMMTA 72
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F FD +G+G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 54
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR D DGDG +++EEF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 175 VMMTA 179
MMTA
Sbjct: 65 QMMTA 69
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F FD +G+G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 51
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR D DGDG +++EEF
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 175 VMMTA 179
MMTA
Sbjct: 66 QMMTA 70
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F FD +G+G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 52
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AFS++D DG+G IT +EL V+RSLG + T AE + MI VD DG+GTIDF
Sbjct: 7 EQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 66
Query: 172 EFKVMM 177
EF +M
Sbjct: 67 EFLNLM 72
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ E ++ F+ FD +GDG I+ ELG+++ SLG TE ELQ M+ E+DA
Sbjct: 9 ISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDA 57
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 64/114 (56%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ F FD + +G IS+SEL +++ SLG + +E E+ ++ EID
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEF 68
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECR 154
L ++ + S + + L +AF V+D +G+G I+A EL VL S+G+ T AE
Sbjct: 69 LALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AF+++D D NGSI++ EL V+RSLG + AE ++ +D DG+ I+F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 172 EFKVMMT 178
EF +M+
Sbjct: 67 EFLALMS 73
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V D DGNG I+A EL V+ +LG+ T E MIR D DGDG +++EEF
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 175 VMMTA 179
MMTA
Sbjct: 89 QMMTA 93
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F D +G+G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 75
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF- 173
E LK+AF V+D D NG I+A EL V+ +LG+ T E +MI+ D DGDG +++EEF
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Query: 174 KVMMTA 179
K+MMT
Sbjct: 64 KMMMTV 69
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
EL++ F FD + +G ISASEL ++ +LG T+EE+++M++E D
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEAD 50
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF- 173
E LK+AF V+D D NG I+A EL V+ +LG+ T E +MI+ D DGDG +++EEF
Sbjct: 9 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
Query: 174 KVMMT 178
K+MMT
Sbjct: 69 KMMMT 73
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
EL++ F FD + +G ISASEL ++ +LG T+EE+++M++E D
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEAD 55
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF- 173
E LK+AF V+D D NG I+A EL V+ +LG+ T E MIR D DGDG I++EEF
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 174 KVMM 177
KVMM
Sbjct: 64 KVMM 67
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
EL++ F FD + +G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 50
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V+D DGNG I+A +L V+ +LG+ T E MIR D DGDG +++E+F
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFV 66
Query: 175 VMMTA 179
MMTA
Sbjct: 67 QMMTA 71
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F FD +G+G ISA++L ++T+LG T+EE+ +M+RE D
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREAD 53
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E +++AF V+D DGNG I+A EL V+ +LG+ T E MIR D DGDG +++EEF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 175 VMM 177
MM
Sbjct: 65 QMM 67
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F FD +G+G ISA+EL ++T+LG T+EE+ +M+RE D
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 51
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 170 FEEFKVMM 177
FEEF VMM
Sbjct: 75 FEEFLVMM 82
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD 66
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 42/65 (64%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E L +AF V+D DGNG I+A EL V+ +LG+ T E MIR D DGDG I++EEF
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 175 VMMTA 179
MM +
Sbjct: 68 RMMVS 72
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
EL + F FD +G+G ISA+EL ++T+LG T++E+ +M+RE D
Sbjct: 9 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD 54
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 4 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 63
Query: 170 FEEFKVMMT 178
FEEF VMM
Sbjct: 64 FEEFLVMMV 72
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
+ E + F+ FDA+G G IS ELG+++ LG T+EEL ++ E+D
Sbjct: 8 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVD 55
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXX 101
E+ + F+ FD N DG + EL + +LG + E+ ++ E D+
Sbjct: 23 QEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFY 82
Query: 102 XLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVD 161
+ + + + ++ +K AF ++D D G I+ + L +V + LG+ T E R MI D
Sbjct: 83 IVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFD 142
Query: 162 CDGDGTIDFEEF 173
DGDG I+ EF
Sbjct: 143 LDGDGEINENEF 154
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 110 SAEVMENLK----DAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGD 165
++E++E K +AFS++D++ +G + EL +++LG + E +I D +G
Sbjct: 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGR 73
Query: 166 GTIDFEEFKVMMTAGSRYEFADPV 189
+ +++F ++M G + DP+
Sbjct: 74 HLMKYDDFYIVM--GEKILKRDPL 95
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E + + K+AF ++D DG+G IT EEL V+RSL + T E + MI VD DG+GTI+
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 170 FEEFKVMM 177
F+EF +M
Sbjct: 65 FDEFLSLM 72
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ + ++ F FD +GDG I+ EL +++ SL TEEELQ M+ E+DA
Sbjct: 9 IVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDA 57
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E + + K+AF ++D DG+G IT EEL V+RSL + T E + MI VD DG+GTI+
Sbjct: 5 SEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIE 64
Query: 170 FEEFKVMM 177
F+EF +M
Sbjct: 65 FDEFLSLM 72
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ + ++ F FD +GDG I+ EL +++ SL TEEELQ M+ E+DA
Sbjct: 9 IVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDA 57
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L D F ++D + +G I EEL +L++ G+ T + ++
Sbjct: 78 LVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELM 137
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG ID++EF M
Sbjct: 138 KDGDKNNDGRIDYDEFLEFM 157
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ + L V+R LG + T E +I VD DG GTID
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTID 74
Query: 170 FEEFKVMM 177
FEEF VMM
Sbjct: 75 FEEFLVMM 82
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
+ E + F+ FDA+G G IS LG+++ LG T+EEL ++ E+D
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVD 66
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E++ K AF ++D DG G I+ +EL V+R LG + T E +I VD DG GTID
Sbjct: 15 SEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTID 74
Query: 170 FEEFKVMM 177
FEEF VMM
Sbjct: 75 FEEFLVMM 82
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
+ E + F+ FDA+G G IS ELG+++ LG T+ EL ++ E+D
Sbjct: 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVD 66
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L D F ++D + +G I EEL +L++ G+ T + ++
Sbjct: 78 LVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELM 137
Query: 158 RGVDCDGDGTIDFEEF 173
+ D + DG ID++EF
Sbjct: 138 KDGDKNNDGRIDYDEF 153
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MM 177
MM
Sbjct: 80 MM 81
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 114 MENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
+E +++AF V+D DGNG I+ +EL +RSLG E +I+ +D DGDG +DFEEF
Sbjct: 35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
Query: 174 KVMM 177
++
Sbjct: 95 VTLL 98
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
++ E+R+ F FD +G+G IS ELG+ + SLG+ E EL+ +++ +D
Sbjct: 34 ELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLD 82
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMV-----REIDAXXXXXXXX 97
E ++ F FD GDGKI S+ G ++ +LG T E+ K++ E++
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 69
Query: 98 XXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
K D E+ + V+D +GNG++ E+ VL +LG+ T E +++
Sbjct: 70 LPMMQTIAKNKDQG-CFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV 128
Query: 158 RGVDCDGDGTIDFEEFKVMMTAG 180
G + D +G I++EE M+ +G
Sbjct: 129 AGHE-DSNGCINYEELVRMVLSG 150
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD--GDGT 167
S E K+AF ++D G+G I + V+R+LG + T AE +++ D T
Sbjct: 4 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKT 63
Query: 168 IDFEEFKVMMTAGSRYE----FADPVQG 191
+ FE+F MM ++ + F D V+G
Sbjct: 64 LKFEQFLPMMQTIAKNKDQGCFEDYVEG 91
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMV-----REIDAXXXXXXXX 97
E ++ F FD GDGKI S+ G ++ +LG T E+ K++ E++
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQF 67
Query: 98 XXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
K D E+ + V+D +GNG++ E+ VL +LG+ T E +++
Sbjct: 68 LPMMQTIAKNKDQG-CFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLV 126
Query: 158 RGVDCDGDGTIDFEEFKVMMTAG 180
G + D +G I++EE M+ +G
Sbjct: 127 AGHE-DSNGCINYEELVRMVLSG 148
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD--GDGT 167
S E K+AF ++D G+G I + V+R+LG + T AE +++ D T
Sbjct: 2 SEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKT 61
Query: 168 IDFEEFKVMMTAGSRYE----FADPVQG 191
+ FE+F MM ++ + F D V+G
Sbjct: 62 LKFEQFLPMMQTIAKNKDQGCFEDYVEG 89
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E ++ FN D N DG I +L +L S+G T+E L+ M+ E
Sbjct: 6 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMF 65
Query: 101 -XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRG 159
LN G D +V+ N AF+ +D + +G I + L ++L ++GD T E M R
Sbjct: 66 GEKLN--GTDPEDVIRN---AFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 160 VDCDGDGTIDFEEFKVMMTAGSR 182
D G ++ EF ++ G++
Sbjct: 121 APIDKKGNFNYVEFTRILKHGAK 143
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 6/135 (4%)
Query: 45 RQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVRE----IDAXXXXXXXXXXX 100
+ +F FD G G I+ LG L ++G+ T + +Q ++ DA
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 101 XXLNTKGVDSAEV--MENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIR 158
+N K +D+ E+ AF V+D + G ++ +L +L LG+ T AE +++
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 159 GVDCDGDGTIDFEEF 173
GV+ D +G ID+++F
Sbjct: 127 GVEVDSNGEIDYKKF 141
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXX 101
E+ + F+ FD N DG + EL +LG + E+ ++ E D+
Sbjct: 23 QEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYDDFY 82
Query: 102 XLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVD 161
+ + + + ++ +K AF ++D D G I+ + L +V + LG+ T E R I D
Sbjct: 83 IVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFD 142
Query: 162 CDGDGTIDFEEFKVMMT 178
DGDG I+ EF + T
Sbjct: 143 LDGDGEINENEFIAICT 159
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 110 SAEVMENLK----DAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGD 165
++E++E K +AFS++D + +G + EL ++LG + E +I D +G
Sbjct: 14 NSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGR 73
Query: 166 GTIDFEEFKVMMTAGSRYEFADPV 189
+++F ++ G + DP+
Sbjct: 74 HLXKYDDFYIV--XGEKILKRDPL 95
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L D F ++D + +G I +EL +L++ G+ T + ++
Sbjct: 78 LVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 158 RGVDCDGDGTIDFEEF 173
+ D + DG ID++EF
Sbjct: 138 KDGDKNNDGRIDYDEF 153
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MM 177
MM
Sbjct: 80 MM 81
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMV-----REIDAXXXXX 94
++++ ++ F FD GD KI+ S++G I+ +LG T E+ K++ E++A
Sbjct: 2 EINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITF 61
Query: 95 XXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECR 154
D E+ + V+D +GNG++ EL VL +LG+ T E
Sbjct: 62 EEFLPMLQAAANNKDQG-TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 120
Query: 155 RMIRGVDCDGDGTIDFEEF 173
+++G + D +G I++E F
Sbjct: 121 ELMKGQE-DSNGCINYEAF 138
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMV-----REIDAXXXXXXXX 97
+ ++ F FD GD KI+AS++G I +LG T E+ K++ E++A
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 66
Query: 98 XXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
D E+ + V+D +GNG++ EL VL +LG+ T E ++
Sbjct: 67 LPMLQAAANNKDQG-TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 125
Query: 158 RGVDCDGDGTIDFEEF 173
+G + D +G I++E F
Sbjct: 126 KGQE-DSNGCINYEAF 140
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD--GDGT 167
S ++ K+AF ++D G+ ITA ++ + R+LG + T AE +++ +
Sbjct: 1 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA 60
Query: 168 IDFEEFKVMMTAGSRYE----FADPVQG 191
I FEEF M+ A + + F D V+G
Sbjct: 61 ITFEEFLPMLQAAANNKDQGTFEDFVEG 88
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMV-----REIDAXXXXXXXX 97
+ ++ F FD GD KI+AS++G I +LG T E+ K++ E++A
Sbjct: 9 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 68
Query: 98 XXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
D E+ + V+D +GNG++ EL VL +LG+ T E ++
Sbjct: 69 LPMLQAAANNKDQG-TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 127
Query: 158 RGVDCDGDGTIDFEEF 173
+G + D +G I++E F
Sbjct: 128 KGQE-DSNGCINYEAF 142
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCD--GDGT 167
S ++ K+AF ++D G+ ITA ++ + R+LG + T AE +++ +
Sbjct: 3 SKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAA 62
Query: 168 IDFEEFKVMMTAGSRYE----FADPVQG 191
I FEEF M+ A + + F D V+G
Sbjct: 63 ITFEEFLPMLQAAANNKDQGTFEDFVEG 90
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 101 XXLNT---KGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ K + E L D F ++D + +G I EEL +L++ G+ T + ++
Sbjct: 78 LVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELM 137
Query: 158 RGVDCDGDGTIDFEEFKVMM 177
+ D + DG ID++EF M
Sbjct: 138 KDGDKNNDGRIDYDEFLEFM 157
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 117 LKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVM 176
LK+AF V D + G I + L +L+SLGD+ T E MI D DG GT+D+EEFK +
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
Query: 177 MTA 179
M +
Sbjct: 69 MMS 71
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
D EL++ F D G I L IL SLG TE+E++ M+ E D
Sbjct: 5 DERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDT 54
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L D F ++D + +G I +EL +L++ G+ T + ++
Sbjct: 78 LVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 158 RGVDCDGDGTIDFEEF 173
+ D + DG ID++E+
Sbjct: 138 KDGDKNNDGRIDYDEW 153
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MM 177
MM
Sbjct: 80 MM 81
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXL 103
L+++F D + G I+ EL L +G E E++ ++ D
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG-DDCTLAECRRMIRGVDC 162
T ++ E ENL AFS +D DG+G IT +E+ Q + G DD + + MI+ +D
Sbjct: 72 -TVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD---MIKEIDQ 127
Query: 163 DGDGTIDFEEFKVMM 177
D DG ID+ EF MM
Sbjct: 128 DNDGQIDYGEFAAMM 142
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E + LK+ F + D D +G+IT +EL L+ +G + +E + ++ D D GTID
Sbjct: 5 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 64
Query: 170 FEEF 173
+ EF
Sbjct: 65 YGEF 68
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+AF+++D D NGSI++ EL V+RSLG + AE ++ +D DG+ I+F
Sbjct: 7 EQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFS 66
Query: 172 EFKVMMT 178
EF +M+
Sbjct: 67 EFLALMS 73
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
+ E ++ F FD + +G IS+SEL +++ SLG + +E E+ ++ EID
Sbjct: 9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEID 56
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L D F + D + +G I +EL +L++ G+ T + ++
Sbjct: 78 LVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 158 RGVDCDGDGTIDFEEF 173
+ D + DG ID++EF
Sbjct: 138 KDGDKNNDGRIDYDEF 153
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MM 177
MM
Sbjct: 80 MM 81
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID--AXXXXXXXX 97
+++ LR +F D + G +S+ E+ L +G+ ++ +++R+ID A
Sbjct: 55 EINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTD 114
Query: 98 XXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAE--CRR 155
++ + EV F +DIDGNG I+ EEL ++ + L +
Sbjct: 115 FLAATIDKQTYLKKEVC---LIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDS 171
Query: 156 MIRGVDCDGDGTIDFEEFKVMMT 178
+++ VD +GDG IDF EF +MM+
Sbjct: 172 LLQEVDLNGDGEIDFHEFMLMMS 194
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 101 XXLNTKGVD---SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMI 157
+ + + + E L D F ++D + +G I +EL +L++ G+ T + ++
Sbjct: 78 LVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELM 137
Query: 158 RGVDCDGDGTIDFEE 172
+ D + DG ID++E
Sbjct: 138 KDGDKNNDGRIDYDE 152
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MM 177
MM
Sbjct: 80 MM 81
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
V E ++ F D + DG IS +++ + SLG TE+EL MV E
Sbjct: 56 VQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLTIF 115
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G D +V+ N AF+++D +G+G E L + L + G+ + E + +
Sbjct: 116 GD-RIAGTDEEDVIVN---AFNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEA 170
Query: 161 DCDGDGTIDFEEFKVMMTAGSRYEFA 186
DG+G ID ++F ++T G++ E A
Sbjct: 171 PIDGNGLIDIKKFAQILTKGAKEEGA 196
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXL 103
L++ FN DA+ G+I+ EL + L +G E E+ + + D
Sbjct: 29 LKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDYKEFIAA 88
Query: 104 NTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG-DDCTLAECRRMIRGVDC 162
T ++ E ++L AF+ +D DG+G IT +EL Q G +D + E + R VD
Sbjct: 89 -TLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEE---LXRDVDQ 144
Query: 163 DGDGTIDFEEFKVMMTAGS 181
D DG ID+ EF GS
Sbjct: 145 DNDGRIDYNEFVAXXQKGS 163
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E + LK+ F+ D D +G IT EEL L+ +G + +E + + D D GTID
Sbjct: 22 SEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTID 81
Query: 170 FEEF 173
++EF
Sbjct: 82 YKEF 85
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
+ + L++AF +YD +GNG I+ + + ++L L + + + MI +D DG GT+DFEE
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 173 FKVMMTAG 180
F +MT G
Sbjct: 61 FMGVMTGG 68
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
ELR+ F +D G+G IS + IL L + E+L M+ EIDA
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDA 50
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXX 101
E+R+ F+ FDA+G G I EL +LG +EE++K + EID
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXNFGDFL 90
Query: 102 XLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVD 161
+ T+ + E + AF ++D D G I+ + L +V + LG++ T E + I D
Sbjct: 91 TVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEAD 150
Query: 162 CDGDGTIDFEEFKVMMTAGSRY 183
DGDG + +EF + S Y
Sbjct: 151 RDGDGEVSEQEFLRIXKKTSLY 172
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + +++AF ++D DG G+I +EL R+LG + E ++ I +D +G G +
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXN 85
Query: 170 FEEFKVMMT 178
F +F + T
Sbjct: 86 FGDFLTVXT 94
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 45 RQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXLN 104
+Q F+ FD +G G+I + +G +L + G T E+ ++ + A N
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPN 67
Query: 105 TKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDG 164
G D E F V+D D G I EL VL SLG+ + E +++GV
Sbjct: 68 --GFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK- 124
Query: 165 DGTIDFEEFKVMMTA 179
DG +++ +F M+ A
Sbjct: 125 DGMVNYHDFVQMILA 139
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREI 87
D E + F FD + G I EL +LTSLG + EE+ ++++ +
Sbjct: 74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGV 121
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMV---REIDAXXXXXXXX 97
+ E ++ F FD GDGKI S+ G ++ +LG T E+ K++ + +
Sbjct: 9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFE 68
Query: 98 XXXXXLNTKGVDSAE-VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRM 156
L + + E+ + F V+D +GNG + EL VL +LG+ T E +
Sbjct: 69 TFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETV 128
Query: 157 IRGVDCDGDGTIDFEEF 173
+ G + D +G I++E F
Sbjct: 129 LAGHE-DSNGCINYEAF 144
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MM 177
MM
Sbjct: 80 MM 81
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MMT 178
MM
Sbjct: 80 MMV 82
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +GSI+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MMT 178
MM
Sbjct: 80 MMV 82
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%)
Query: 114 MENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
+E+L+ AF +D DG+G IT +EL + + LG E MIR D D DG +++EEF
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 64
Query: 174 KVMMT 178
M+
Sbjct: 65 ARMLA 69
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
+ +L+ F FD +GDG I+ EL + LG +EEL M+RE D
Sbjct: 5 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREAD 52
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSL-GHAATEEELQKMVREIDAXXXXXXXXX 98
+ EL +F D NGDG++ EL + L G +L ++ E+DA
Sbjct: 344 ETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR 403
Query: 99 X----XXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAE 152
T +D ++ + L+ AF +D DGNG I+ +EL V D
Sbjct: 404 NGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKT 461
Query: 153 CRRMIRGVDCDGDGTIDFEEFKVMM 177
+ MI G+D + DG +DFEEF M+
Sbjct: 462 WKEMISGIDSNNDGDVDFEEFCKMI 486
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 114 MENLKDAFSVYDIDGNGSITAEELHQVLRSL-GDDCTLAECRRMIRGVDCDGDGTIDFEE 172
++ L+DAF +D +G+G I+ EL + +R L G + +IR VD +GDG +DFEE
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 173 FKVMMT 178
F MM+
Sbjct: 66 FVRMMS 71
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTS-LGHAATEEELQKMVREID 88
V ELR F +FD NGDG+IS SEL + LGH ++++++R++D
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVD 54
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSL-GHAATEEELQKMVREIDAXXXXXXXXX 98
+ EL +F D NGDG++ EL + L G +L ++ E+DA
Sbjct: 61 ETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR 120
Query: 99 X----XXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAE 152
T +D ++ + L+ AF +D DGNG I+ +EL V D
Sbjct: 121 NGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKT 178
Query: 153 CRRMIRGVDCDGDGTIDFEEFKVMM 177
+ MI G+D + DG +DFEEF M+
Sbjct: 179 WKEMISGIDSNNDGDVDFEEFCKMI 203
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
+ E + +++AF ++D DG G+I +EL +R+LG + E ++MI +D +G G ++
Sbjct: 26 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 170 FEEFKVMMT 178
F +F +MT
Sbjct: 86 FGDFLTVMT 94
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+R+ F+ FDA+G G I EL + +LG +EE++KM+ EID
Sbjct: 31 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEID 77
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 152 ECRRMIRGVDCDGDGTIDFEEFKVMMTA 179
E R D DG GTID +E KV M A
Sbjct: 32 EIREAFDLFDADGTGTIDVKELKVAMRA 59
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
D+ + ++F +FD NGDGKIS+SELG L +LG + T +E+++M+ EID
Sbjct: 9 DIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEID 56
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
F +D +G+G I++ EL L++LG T E RRM+ +D DGDG I F+EF
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEF 68
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ D +G I+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MMT 178
MM
Sbjct: 80 MMV 82
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F + DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ D +G I+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MMT 178
MM
Sbjct: 80 MMV 82
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F + DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ EL++ F D + DG I +L + +SLG ++EL M++E
Sbjct: 15 MQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPG----QLNFTAF 70
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIR 158
L + V + + L++AFS++D DG G I + L +L ++GD+ + E + + +
Sbjct: 71 LTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWK 128
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG----DD---CTLAEC 153
S M+ LK+AF++ D D +G I E+L + SLG DD L EC
Sbjct: 11 SQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC 61
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVRE 86
LR F+ FD +G G I L +L ++G ++EE++ + ++
Sbjct: 87 LRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD 129
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 106 KGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGD 165
K V +AE + K+AF ++D D + +TAEEL V+R+LG + T + +++ D D
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 166 GTIDFEEFKVMM 177
G D E F +M
Sbjct: 65 GKFDQETFLTIM 76
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E ++ F FD + D K++A ELG+++ +LG T++++ ++V++ D
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYD 60
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
D E ++F +FDANGDGKISA+ELG L +LG + T +E++ M+ EID
Sbjct: 7 DKAERERIFKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEID 54
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
F +D +G+G I+A EL + L++LG T E + M+ +D DGDG I F+EF
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEF 66
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 120 AFSVYDIDGNGSITAEELHQVLRSLGDDCTLAE-----CRRMIRGVDCDGDGTIDFEEFK 174
AF V+D+D +G IT EL VL + + E ++MIR VD +GDG IDF EF
Sbjct: 130 AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFS 189
Query: 175 VMM 177
MM
Sbjct: 190 EMM 192
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +G I+ +EL +V+R LG + T E + MI VD DG GT+DF+EF V
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79
Query: 176 MMT 178
MM
Sbjct: 80 MMV 82
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 117 LKDAFSVYDIDG--NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
K AF ++ + G +G I+ +EL +V+R LG + T E + MI VD DG GT+DF+EF
Sbjct: 20 FKAAFDIF-VQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 175 VMMT 178
VMM
Sbjct: 79 VMMV 82
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKF-DANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 40 DVHELRQVFNKFDANGDGKISASEL-----------GSILTSLGHAATEEELQKMVREID 88
+ EL +F+K D NGDG++ +EL G + L +A E E+ ++ +D
Sbjct: 357 ETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQV---LD 413
Query: 89 AXXXXXXXXXXXXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRSLGD 146
A T +D ++ E L+ AF ++D D +G I++ EL +
Sbjct: 414 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--S 471
Query: 147 DCTLAECRRMIRGVDCDGDGTIDFEEFKVMM 177
D + ++ VD + DG +DF+EF+ M+
Sbjct: 472 DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 502
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASEL-----------GSILTSLGHAATEEELQKMVRE 86
+ + EL Q+F + D NGDG++ EL G ++ L + E E+ +++
Sbjct: 310 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS 369
Query: 87 IDAXXXXXXXXXXXXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVL-RS 143
+D T +D ++ E L AF +D DG+G IT EEL ++ +
Sbjct: 370 VD---FDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVT 426
Query: 144 LGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMM 177
DD T ++++ D + DG +DFEEF MM
Sbjct: 427 EVDDET---WHQVLQECDKNNDGEVDFEEFVEMM 457
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 40 DVHELRQVFNKFDANGDGKISASEL-----------GSILTSLGHAATEEELQKMVREID 88
+ EL +F+K D NGDG++ +EL G + L +A E E+ ++ +D
Sbjct: 356 ETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQV---LD 412
Query: 89 AXXXXXXXXXXXXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRSLGD 146
A T +D ++ E L+ AF ++D D +G I++ EL +
Sbjct: 413 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--S 470
Query: 147 DCTLAECRRMIRGVDCDGDGTIDFEEFKVMM 177
D + ++ VD + DG +DF+EF+ M+
Sbjct: 471 DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 501
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 40 DVHELRQVFNKFDANGDGKISASEL-----------GSILTSLGHAATEEELQKMVREID 88
+ EL +F+K D NGDG++ +EL G + L +A E E+ ++ +D
Sbjct: 333 ETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQV---LD 389
Query: 89 AXXXXXXXXXXXXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRSLGD 146
A T +D ++ E L+ AF ++D D +G I++ EL +
Sbjct: 390 AVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--S 447
Query: 147 DCTLAECRRMIRGVDCDGDGTIDFEEFKVMM 177
D + ++ VD + DG +DF+EF+ M+
Sbjct: 448 DVDSETWKSVLSEVDKNNDGEVDFDEFQQML 478
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 120 AFSVYDIDGNGSITAEELHQVLRSLGDDCTLAE-----CRRMIRGVDCDGDGTIDFEEFK 174
AF V+D+D +G IT EL +L + + + +RMIR VD + DG IDF EF
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Query: 175 VMM 177
MM
Sbjct: 187 EMM 189
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 114 MENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
+E LK F V D DG G IT E+L + L G ++ +D DG G ID+ EF
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEF 109
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 5/137 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F D N DG I ++L +SLG ++EL M++E
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIF 60
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF ++D D + E + +L ++GD+ E R +
Sbjct: 61 SD-KLSGTDSEETIRN---AFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 116
Query: 161 DCDGDGTIDFEEFKVMM 177
+G G D+ F M+
Sbjct: 117 PVEG-GKFDYVRFVAMI 132
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASEL-----------GSILTSLGHAATEEELQKMVRE 86
+ + EL Q+F + D NGDG++ EL G ++ L + E E+ +++
Sbjct: 36 LEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQS 95
Query: 87 IDAXXXXXXXXXXXXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVL-RS 143
+D T +D ++ E L AF +D DG+G IT EEL ++ +
Sbjct: 96 VD---FDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFGVT 152
Query: 144 LGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMM 177
DD T ++++ D + DG +DFEEF MM
Sbjct: 153 EVDDET---WHQVLQECDKNNDGEVDFEEFVEMM 183
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 6/141 (4%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F D N DG I ++L + +SLG ++EL M++E
Sbjct: 18 IQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIF 77
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF ++D + E + +L ++GD+ E R +
Sbjct: 78 SD-KLSGTDSEETIRN---AFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 133
Query: 161 DCDGDGTIDFEEFKVMMTAGS 181
+G G D+ F V M GS
Sbjct: 134 PVEG-GKFDYVRF-VAMIKGS 152
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +G I+ +EL +V+R LG + T E + MI VD DG GT+DF+E+ V
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLV 79
Query: 176 MMT 178
MM
Sbjct: 80 MMV 82
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 117 LKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
K AF ++ + +G I+ +EL +V+R LG + T E + MI VD DG GT+DF+E+ V
Sbjct: 20 FKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEWLV 79
Query: 176 MM 177
MM
Sbjct: 80 MM 81
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG ++ LG T EELQ+M+ E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 40 DVHELRQVFNKFD-ANG-DGKISASELGSILTSLGHAATEEELQ-----KMVREIDAXXX 92
++ E+R+VF+ FD +G DG + A+++G +L LG TE ++ K + E
Sbjct: 7 EIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLE 66
Query: 93 XXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAE 152
G + E ME AF +D +G G I++ E+ VL+ LG+ T +
Sbjct: 67 EILPIYEEMSSKDTGTAADEFME----AFKTFDREGQGLISSAEIRNVLKMLGERITEDQ 122
Query: 153 CRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
C + D D DG I +E+ + AG
Sbjct: 123 CNDIFTFCDIREDIDGNIKYEDLMKKVMAG 152
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 47 VFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXL--N 104
+F + D NGDG +S E+ + ++ E+ LQ + + IDA +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 105 TKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDG 164
+G D ++ LK + + D+DG+G +T EE+ + G + + + D +G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANG 120
Query: 165 DGTIDFEEF 173
DG I EEF
Sbjct: 121 DGYITLEEF 129
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 47 VFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVR--EIDAXXXXXXXXXXXXXLN 104
+F + DANGDG +S E+ + ++S E+ LQ + + +ID
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAA 64
Query: 105 TKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDG 164
K D ++ LK + + D DG+G +T EE+ + G + + + + D +G
Sbjct: 65 VKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMK----ADANG 120
Query: 165 DGTIDFEEF 173
DG I EEF
Sbjct: 121 DGYITLEEF 129
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAG 180
F D +G+GS++ EE+ + S + + + +D DG+G ID EF A
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAV 65
Query: 181 SRYEFADPVQG 191
+ +D G
Sbjct: 66 KEQDLSDEKVG 76
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQK 82
L+ ++ DA+GDGK++ E+ + G+ +++ K
Sbjct: 77 LKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIMK 115
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Query: 47 VFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXL--N 104
+F + D NGDG +S E+ + ++ E+ LQ + + IDA +
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 105 TKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDG 164
+G D ++ LK + + D+DG+G +T EE+ + G + + + D +G
Sbjct: 65 IQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANG 120
Query: 165 DGTIDFEEF 173
DG I EEF
Sbjct: 121 DGYITLEEF 129
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F+ D + DG +S ++ +I LG A ++EL M++E
Sbjct: 5 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIF 64
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF+++D + E + +L ++GD+ E R +
Sbjct: 65 SD-KLSGTDSEETIRN---AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 120
Query: 161 DCDGDGTIDFEEFKVMM 177
+G G D+ +F M+
Sbjct: 121 PVEG-GKFDYVKFTAMI 136
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F+ D + DG +S ++ +I LG A ++EL M++E
Sbjct: 6 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIF 65
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF+++D + E + +L ++GD+ E R +
Sbjct: 66 SD-KLSGTDSEETIRN---AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 121
Query: 161 DCDGDGTIDFEEFKVMM 177
+G G D+ +F M+
Sbjct: 122 PVEG-GKFDYVKFTAMI 137
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F+ D + DG +S ++ +I LG A ++EL M++E
Sbjct: 6 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIF 65
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF+++D + E + +L ++GD+ E R +
Sbjct: 66 SD-KLSGTDSEETIRN---AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 121
Query: 161 DCDGDGTIDFEEFKVMMTAGSRYE 184
+G G D+ +F M+ E
Sbjct: 122 PVEG-GKFDYVKFTAMIKGSGEEE 144
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F+ D + DG +S ++ +I LG A ++EL M++E
Sbjct: 17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIF 76
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF+++D + E + +L ++GD+ E R +
Sbjct: 77 SD-KLSGTDSEETIRN---AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 132
Query: 161 DCDGDGTIDFEEFKVMMTAGSRYE 184
+G G D+ +F M+ E
Sbjct: 133 PVEG-GKFDYVKFTAMIKGSGEEE 155
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F+ D + DG +S ++ +I LG A ++EL M++E
Sbjct: 3 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIF 62
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF+++D + E + +L ++GD+ E R +
Sbjct: 63 SD-KLSGTDSEETIRN---AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 118
Query: 161 DCDGDGTIDFEEFKVMM 177
+G G D+ +F M+
Sbjct: 119 PVEG-GKFDYVKFTAMI 134
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 6/141 (4%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F D N DG I ++L + +SLG ++EL M++E
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIF 81
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF ++D + E + +L ++GD+ E R +
Sbjct: 82 SD-KLSGTDSEETIRN---AFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 137
Query: 161 DCDGDGTIDFEEFKVMMTAGS 181
+G G D+ F V M GS
Sbjct: 138 PVEG-GKFDYVRF-VAMIKGS 156
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG 145
++M+ +K+AF++ D + +G I +L ++ SLG
Sbjct: 20 KLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLG 53
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 6/141 (4%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ E+++ F D N DG I ++L + +SLG ++EL M++E
Sbjct: 22 MQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIF 81
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
G DS E + N AF ++D + E + +L ++GD+ E R +
Sbjct: 82 SD-KLSGTDSEETIRN---AFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 137
Query: 161 DCDGDGTIDFEEFKVMMTAGS 181
+G G D+ F V M GS
Sbjct: 138 PVEG-GKFDYVRF-VAMIKGS 156
Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 23/34 (67%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG 145
++M+ +K+AF++ D + +G I +L ++ SLG
Sbjct: 20 KLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLG 53
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
++++ F +D +G+G I+ EL LR+LG + E +RM+ +D DGDG IDF EF
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGS-TSADEVQRMMAEIDTDGDGFIDFNEF 60
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
++ ++F +FD NGDGKIS SEL L +LG + + +E+Q+M+ EID
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEID 48
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
++++ F +D +G+G I+ EL LR+LG + E +RM+ +D DGDG IDF EF
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGS-TSADEVQRMMAEIDTDGDGFIDFNEF 59
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
++ ++F +FD NGDGKIS SEL L +LG + + +E+Q+M+ EID
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEID 47
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASEL---------------GSILTSLGHAATEEELQK 82
+ + +L ++F K D N DG + EL S++ + G + E+++
Sbjct: 327 LDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG-STIEDQIDS 385
Query: 83 M--VREIDAXXXXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQV 140
+ + ++D ++ + S E ME AF ++D DG+G I+ +EL ++
Sbjct: 386 LMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMER---AFKMFDKDGSGKISTKELFKL 442
Query: 141 LRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRYE 184
+ E +I VD + DG +DF EF M+ R E
Sbjct: 443 FSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVRNE 486
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%)
Query: 105 TKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDG 164
T+ + + E + AF ++D D G I+ + L +V + LG++ T E + MI D DG
Sbjct: 11 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 70
Query: 165 DGTIDFEEFKVMMTAGSRY 183
DG + +EF +M S Y
Sbjct: 71 DGEVSEQEFLRIMKKTSLY 89
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+ + F FD + GKIS L + LG T+EELQ+M+ E D
Sbjct: 21 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 67
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATE-EELQKMVREIDAXXXXXXXXX 98
++ + ++ F D N DG I +L ++G + EEL M++E
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLT 82
Query: 99 XXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIR 158
KG D +V + AF V D DG GSI L ++L + G T E + M
Sbjct: 83 MFGE-KLKGADPEDV---IMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 138
Query: 159 GVDCDGDGTIDFEEFKVMMTAGSRYE 184
D G +D++ ++T G E
Sbjct: 139 AFPPDVAGNVDYKNICYVITHGEDAE 164
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 5/142 (3%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATE-EELQKMVREIDAXXXXXXXXX 98
++ + ++ F D N DG I +L ++G + EEL M++E
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLT 64
Query: 99 XXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIR 158
KG D +V + AF V D DG GSI L ++L + G T E + M
Sbjct: 65 MFGE-KLKGADPEDV---IMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWA 120
Query: 159 GVDCDGDGTIDFEEFKVMMTAG 180
D G +D++ ++T G
Sbjct: 121 AFPPDVAGNVDYKNICYVITHG 142
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATE-EELQKMVREIDAXXXXXXXXXX 99
+ + ++ F D N DG I +L ++G + EEL M++E
Sbjct: 11 IQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLTM 70
Query: 100 XXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRG 159
KG D +V+ AF V D DG GSI L ++L + D T E + M
Sbjct: 71 FGE-KLKGADPEDVIMG---AFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAA 126
Query: 160 VDCDGDGTIDFEEFKVMMTAG 180
D G +D++ ++T G
Sbjct: 127 FPPDVAGNVDYKNICYVITHG 147
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 116 NLKDAFSVYDIDGNGSITAEELHQVLRSL---GDDCTLAECRRMIRGVDCDGDGTIDFEE 172
++K F D D +G I EEL VL+S G D T AE + ++ D DGDG I +E
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
Query: 173 FKVMM 177
F+ ++
Sbjct: 103 FETLV 107
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 18/148 (12%)
Query: 40 DVHELRQVFNKFDANGDGKISASEL-----------GSILTSLGHAATEEELQKMVREID 88
+ EL +F+K D NGDG++ +EL G + L +A E E+ ++ +D
Sbjct: 333 ETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQV---LD 389
Query: 89 AXXXXXXXXXXXXXLNTKGVDSAEVM--ENLKDAFSVYDIDGNGSITAEELHQVLRSLGD 146
A T D ++ E L+ AF +D D +G I++ EL +
Sbjct: 390 AVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGV--S 447
Query: 147 DCTLAECRRMIRGVDCDGDGTIDFEEFK 174
D + ++ VD + DG +DF+EF+
Sbjct: 448 DVDSETWKSVLSEVDKNNDGEVDFDEFQ 475
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 43 ELRQVFNKFDANGDGKISASE-------LGSILTSLGHAAT-EEELQKMVREIDAXXXXX 94
EL +F K D NGDG++ E L + LG EEE+ +++E+D
Sbjct: 356 ELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGY 415
Query: 95 XXXXXXXXLNT-KGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQV--LRSLGDDCTLA 151
+ K + +E E L+ AF+++D D +G IT EEL + L S+ +
Sbjct: 416 IEYSEFISVCMDKQILFSE--ERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKT--- 470
Query: 152 ECRRMIRGVDCDGDGTIDFEEFKVMM 177
++ D + D IDF+EF MM
Sbjct: 471 -WNDVLGEADQNKDNMIDFDEFVSMM 495
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEEL---HQVLRSLGDDC-----TLAECRRMIRGVD 161
+ E + L D F D +G+G + +EL + VLR+ ++ E +++ VD
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 162 CDGDGTIDFEEF 173
D +G I++ EF
Sbjct: 410 FDKNGYIEYSEF 421
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 105 TKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDG 164
T+ + + E + AF ++D D G I+ + L +V + LG++ T E + MI D DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 165 DGTIDFEEFKVMMTAGS 181
DG + +EF +M S
Sbjct: 61 DGEVSEQEFLRIMKKTS 77
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+ + F FD + GKIS L + LG T+EELQ+M+ E D
Sbjct: 11 EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 57
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E + +K+AF ++D + GSI EL +R+LG D E ++ D +G+G I
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 170 FEEFKVMMT 178
F++F +MT
Sbjct: 62 FDDFLDIMT 70
Score = 30.0 bits (66), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+++ F+ FD N G I EL + +LG + E+ +++ E D
Sbjct: 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYD 53
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
E+ AF V+D + G ++ +L +L LG+ T AE +++GV+ D +G ID+++F
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 46 QVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVR--EIDA 89
+ F FD GK+S +L +LT LG T+ E+ ++++ E+D+
Sbjct: 9 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDS 54
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 49/139 (35%)
Query: 47 VFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXLNTK 106
VF FDANGDG I E L+ E++L
Sbjct: 68 VFRTFDANGDGTIDFREFIIALSVTSRGKLEQKL-------------------------- 101
Query: 107 GVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRS----------LGDDCTLAECR-- 154
K AFS+YD+DGNG I+ E+ +++++ + +D + E R
Sbjct: 102 -----------KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTE 150
Query: 155 RMIRGVDCDGDGTIDFEEF 173
++ R +D + DG + EEF
Sbjct: 151 KIFRQMDTNRDGKLSLEEF 169
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 129 NGSITAEELHQVLRSL---GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+G ++ EE ++ + GD AE + R D +GDGTIDF EF + ++ SR
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAE--HVFRTFDANGDGTIDFREFIIALSVTSR 94
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 79 ELQKMVREIDAXXXXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELH 138
ELQ M+ E+DA + + + + E +++AF V+D DGNG I+A EL
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 139 QVLRSLG 145
V+ +LG
Sbjct: 62 HVMTNLG 68
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLG 72
E+R+ F FD +G+G ISA+EL ++T+LG
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 19/27 (70%)
Query: 151 AECRRMIRGVDCDGDGTIDFEEFKVMM 177
AE + MI VD DG+GTIDF EF MM
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMM 27
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 117 LKDAFSVYDIDGNGSITAEE-LHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
L+D + D DGNG+I E L + R + D + E R R D DG+G I E +
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 62
Query: 176 MMT 178
+MT
Sbjct: 63 VMT 65
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 120 AFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTA 179
AF ++D D +G+IT ++L +V + LG++ T E + MI D + D ID +EF +M
Sbjct: 14 AFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 73
Query: 180 GSRY 183
S +
Sbjct: 74 TSLF 77
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
E+ + F FD + G I+ +L + LG TEEELQ+M+ E D
Sbjct: 9 EEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEAD 55
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E L + F ++D + +G I EEL ++LR+ G+ + +++ D + DG IDF+EF
Sbjct: 10 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFL 69
Query: 175 VMM 177
MM
Sbjct: 70 KMM 72
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
EL F FD N DG I ELG IL + G EE+++ ++++ D
Sbjct: 10 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSD 56
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTID 169
S E + LK+ F + D D +G+IT +EL L+ +G + +E + ++ D D GTID
Sbjct: 18 SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTID 77
Query: 170 FEEF 173
+ EF
Sbjct: 78 YGEF 81
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 115 ENLKDAFSVY---DIDGNGSITAEELHQVLRSLGDDCT--LAECRRMIRGVDCDGDGTID 169
E +K AF V+ + D N I+ EEL V+++LG ++ MI VD +GDG +
Sbjct: 5 EEIKGAFEVFAAKEGDPN-QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63
Query: 170 FEEFKVMMTAGSR 182
FEEF VMM S+
Sbjct: 64 FEEFLVMMKKISQ 76
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL-GDDCTLAECRRM----IRGVDCDGDGTID 169
+ L+ AF +YD+D +G I+ EL QVL+ + G++ + +++ I D DGDG I
Sbjct: 76 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 135
Query: 170 FEEF 173
FEEF
Sbjct: 136 FEEF 139
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 111 AEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDF 170
A+ ++ L F D+D +GS++ EE SL + +R+I D DG+G +DF
Sbjct: 3 ADEIKRLGKRFKKLDLDNSGSLSVEEFM----SLPELQQNPLVQRVIDIFDTDGNGEVDF 58
Query: 171 EEF 173
+EF
Sbjct: 59 KEF 61
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGD------------DCTLAECRRMIRGV 160
V E LK AF++YDI+ +G IT EE+ +++S+ D D L R + +
Sbjct: 163 VHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKM 222
Query: 161 DCDGDGTIDFEEF 173
D + DG + +EF
Sbjct: 223 DRNQDGVVTIDEF 235
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 41 VHE-LRQVFNKFDANGDGKISASELGSILTSL 71
VHE L+ FN +D N DG I+ E+ +I+ S+
Sbjct: 163 VHEKLKWAFNLYDINKDGCITKEEMLAIMKSI 194
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL-GDDCTLAECRRM----IRGVDCDGDGTID 169
+ L+ AF +YD+D +G I+ EL QVL+ + G++ + +++ I D DGDG I
Sbjct: 75 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 134
Query: 170 FEEF 173
FEEF
Sbjct: 135 FEEF 138
Score = 33.1 bits (74), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 111 AEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDF 170
A+ ++ L F D+D +GS++ EE SL + +R+I D DG+G +DF
Sbjct: 2 ADEIKRLGKRFKKLDLDNSGSLSVEEFM----SLPELQQNPLVQRVIDIFDTDGNGEVDF 57
Query: 171 EEF 173
+EF
Sbjct: 58 KEF 60
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL-GDDCTLAECRRM----IRGVDCDGDGTID 169
+ L+ AF +YD+D +G I+ EL QVL+ + G++ + +++ I D DGDG I
Sbjct: 90 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 149
Query: 170 FEEF 173
FEEF
Sbjct: 150 FEEF 153
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 111 AEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDF 170
A+ ++ L F D+D +GS++ EE SL + +R+I D DG+G +DF
Sbjct: 17 ADEIKRLGKRFKKLDLDNSGSLSVEEFM----SLPELQQNPLVQRVIDIFDTDGNGEVDF 72
Query: 171 EEF 173
+EF
Sbjct: 73 KEF 75
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL-GDDCTLAECRRM----IRGVDCDGDGTID 169
+ L+ AF +YD+D +G I+ EL QVL+ + G++ + +++ I D DGDG I
Sbjct: 89 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRIS 148
Query: 170 FEEF 173
FEEF
Sbjct: 149 FEEF 152
Score = 33.1 bits (74), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 111 AEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDF 170
A+ ++ L F D+D +GS++ EE SL + +R+I D DG+G +DF
Sbjct: 16 ADEIKRLGKRFKKLDLDNSGSLSVEEFM----SLPELQQNPLVQRVIDIFDTDGNGEVDF 71
Query: 171 EEF 173
+EF
Sbjct: 72 KEF 74
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGD------------DCTLAECRRMIRGV 160
V E LK AF++YDI+ +G IT EE+ +++S+ D D R +
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKM 66
Query: 161 DCDGDGTIDFEEF 173
D + DG + EEF
Sbjct: 67 DRNQDGVVTIEEF 79
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 41 VHE-LRQVFNKFDANGDGKISASELGSILTSL 71
VHE L+ FN +D N DG I+ E+ +I+ S+
Sbjct: 7 VHEKLKWAFNLYDINKDGYITKEEMLAIMKSI 38
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 110 SAEVMENLKDAFSVYDIDG-NGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTI 168
+ E K AF ++ + +G I+ +EL +V R LG + T E + I VD DG GT+
Sbjct: 13 TEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTV 72
Query: 169 DFEEFKV 175
DF+EF V
Sbjct: 73 DFDEFLV 79
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 42 HELRQVFNKFDANG-DGKISASELGSILTSLGHAATEEELQKMVREID 88
+E + F+ F DG IS ELG + LG T EELQ+ + E+D
Sbjct: 18 NEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVD 65
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
++ ELR+ F +FD + DG I+ +LG+ + ++G+ TE EL ++ ++I+
Sbjct: 8 EIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQIN 56
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDG 166
S++ + +K F + D D +G I EEL L++ T AE + + D DGDG
Sbjct: 36 SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 95
Query: 167 TIDFEEFKVMMTA 179
I EEF+ ++ A
Sbjct: 96 KIGVEEFQSLVKA 108
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDG 166
S++ + +K F + D D +G I EEL L++ T AE + + D DGDG
Sbjct: 37 SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDG 96
Query: 167 TIDFEEFKVMMTA 179
I EEF+ ++ A
Sbjct: 97 KIGVEEFQSLVKA 109
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 109 DSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTI 168
D+ E+ME F D DG+G+I+ EL+ L S G +LA +++ D + G I
Sbjct: 25 DNQELME----WFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEI 80
Query: 169 DFEEFK 174
F+EFK
Sbjct: 81 TFDEFK 86
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 38 IPDVHE----LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXX 93
D+H +R+ F K D++GDG++ ++E+ + L S G+ +E+ Q ++R+ D
Sbjct: 85 FKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRG 144
Query: 94 XXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSIT 133
L+ + +++ F+ YD + G +T
Sbjct: 145 SLGFDDYVELSI-------FVCRVRNVFAFYDRERTGQVT 177
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 109 DSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTI 168
D +E K + +D++GNG I L ++L LG T E +R+IR V + T
Sbjct: 42 DLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETF 101
Query: 169 DFEEFKVMM 177
+ +F MM
Sbjct: 102 SYSDFLRMM 110
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 48 FNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+ +FD NG+G I L +L LG T EL++++RE+ +
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSS 95
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E L D F ++D + +G I EEL +L++ G+ T + +++ D + DG ID++EF
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 64
Query: 175 VMMTA 179
M
Sbjct: 65 EFMKG 69
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
EL +F FD N DG I EL +L + G TE+++++++++ D
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDK 52
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E L D F ++D + +G I EEL +L++ G+ T + +++ D + DG ID++EF
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 66
Query: 175 VMMTA 179
M
Sbjct: 67 EFMKG 71
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
EL +F FD N DG I EL +L + G TE+++++++++ D
Sbjct: 7 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDK 54
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 116 NLKDAFSVYDIDGNGSITAEELHQVLRSL-GDDCTLAECR----RMIRGVDCDGDGTIDF 170
L AF +YD+D +G I+ E+ QVLR + G T + R ++ D DGDG + F
Sbjct: 115 KLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSF 174
Query: 171 EEF 173
EF
Sbjct: 175 VEF 177
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 120 AFSVYDIDGNGSITAEELHQVLR-----SLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
AF +YD+D + I+ +EL QVLR ++ D+ + R I+ D DGD I F EF
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E L D F ++D + +G I EEL +L++ G+ T + +++ D + DG ID++EF
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 69
Query: 175 VMMTA 179
M
Sbjct: 70 EFMKG 74
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
EL +F FD N DG I EL +L + G TE+++++++++ D
Sbjct: 10 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDK 57
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 149 TLAECRRMIRGVDCDGDGTIDFEEFKVMMTA 179
T E + R D + DG ID EE K+M+ A
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQA 38
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
V E ++ F FD+ G I+ L ++L G +M E DA
Sbjct: 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEF 64
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV 160
+ + + + L+ AF +D +G G I L L +LGD E + G+
Sbjct: 65 LSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFL-GI 123
Query: 161 DCDGDGTIDFEEF 173
G I ++ F
Sbjct: 124 TETEKGQIRYDNF 136
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 120 AFSVYDIDGNGSITAEELHQVLR-----SLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
AF +YD+D + I+ +EL QVLR ++ D+ + R I+ D DGD I F EF
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEF 176
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 120 AFSVYDIDGNGSITAEELHQVLRSLGDD-CTLAECRRMIRGVDCDGDGTIDFEEF 173
AF V+D +G+G I +E +++ +G++ T AE ++ D DG+G ID EF
Sbjct: 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAA-TEEELQKMVREID 88
D E+ + F FDANGDG I E I+ +G T+ E+++ ++E D
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEAD 55
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 152 ECRRMIRGVDCDGDGTIDFEEFKVMM 177
E R + D +GDG IDF+EFK +M
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIM 34
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E L D F ++D + +G I EEL +L++ G+ T + +++ D + DG ID++EF
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 74
Query: 175 VMMTA 179
M
Sbjct: 75 EFMKG 79
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
EL +F FD N DG I EL +L + G TE+++++++++ D
Sbjct: 15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDK 62
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 140 VLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFEEFKVMMTA 179
++R + DD T E + R D + DG ID EE K+M+ A
Sbjct: 1 MVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQA 43
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDG 166
+++ +++K AF++ D D +G I +EL L++ D T E + ++ D DGDG
Sbjct: 37 TSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 96
Query: 167 TIDFEEFKVMMTA 179
I +EF ++ A
Sbjct: 97 KIGVDEFTALVKA 109
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFK 174
E L D F ++D + +G I +EL +L++ G+ T + +++ D + DG ID++EF
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 65
Query: 175 VMMTA 179
M
Sbjct: 66 EFMKG 70
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 42 HELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
EL +F FD N DG I EL +L + G TE+++++++++ D
Sbjct: 6 EELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDK 53
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 111 AEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDF 170
A ++ L F D DG+ S+ A+E Q L LG AE + R D +G GT+D
Sbjct: 33 ASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDL 92
Query: 171 EEF 173
EEF
Sbjct: 93 EEF 95
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 45 RQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREID 88
++VF KFD N DGK+S E + + T+E++ K EID
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEID 47
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 118 KDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
K F +D + +G ++ +E +V + T + + +D DG+G ++ +EF
Sbjct: 4 KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELH---QVLRSLGDDCTLAECRRMIRGVDCDGDG 166
+A+ +++K AF V D D +G I +EL QV + T AE + ++ D DGDG
Sbjct: 37 TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDG 96
Query: 167 TIDFEEFKVMMTA 179
I +E+ ++ A
Sbjct: 97 AIGVDEWAALVKA 109
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ E+ ++F+ +D DG + A ++G + LG E++ KM + +
Sbjct: 9 IDDLKEVFELFDFWDGR-DGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 65
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL LG+ +
Sbjct: 66 FEEFLPAYEGLMDCEQGTYADYME----AFKTFDREGQGFISGAELRHVLSGLGERLSDE 121
Query: 152 ECRRMIRGVDC--DGDGTIDFEEF-KVMMTA 179
E +I D D +G + +EEF K +MT
Sbjct: 122 EVDEIINLTDLQEDLEGNVKYEEFVKKVMTG 152
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ E+ ++F+ +D DG + A ++G + LG E++ KM + +
Sbjct: 8 IDDLKEVFELFDFWDGR-DGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 64
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL LG+ +
Sbjct: 65 FEEFLPAYEGLMDCEQGTYADYME----AFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 152 ECRRMIRGVDC--DGDGTIDFEEF-KVMMTA 179
E +I D D +G + +EEF K +MT
Sbjct: 121 EVDEIINLTDLQEDLEGNVKYEEFVKKVMTG 151
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDG 166
+++ ++++K AF V D D +G I +EL L++ T AE + + D DGDG
Sbjct: 36 ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDG 95
Query: 167 TIDFEEFKVMMTA 179
I +EF M+ A
Sbjct: 96 MIGVDEFAAMIKA 108
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 108 VDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSL------GDDCTLAECRRMIR-GV 160
V +V + L+ F +YD+DGNG I EL +++++ + T E M+ +
Sbjct: 81 VLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKI 140
Query: 161 DCDGDGTIDFEEF 173
D +GDG + EEF
Sbjct: 141 DINGDGELSLEEF 153
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ ++ ++F+ +D DG + A +LG + LG E++ KM + +
Sbjct: 8 IDDLKDVFELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 64
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL LG+ +
Sbjct: 65 FEEFLPAYEGLMDCEQGTFADYME----AFKTFDREGQGFISGAELRHVLSGLGERLSDE 120
Query: 152 ECRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
E +I D D +G + +EEF + AG
Sbjct: 121 EVDEIINLTDLQEDLEGNVKYEEFVKKVMAG 151
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDG 166
+++ +++K AF++ D D +G I +EL L++ D T E + ++ D DGDG
Sbjct: 36 TSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 95
Query: 167 TIDFEEFKVMMTA 179
I +E+ ++ A
Sbjct: 96 KIGVDEWTALVKA 108
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 116 NLKDAFSVYDIDGNGSITAEELH---QVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
+KD F D D +G + EEL Q S + T +E + ++ D DGDG I EE
Sbjct: 43 QVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEE 102
Query: 173 FKVMM 177
F+ M+
Sbjct: 103 FQEMV 107
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV--------D 161
SA V E +K AF +YD+ G I EEL +++ +L + L MI + D
Sbjct: 106 SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQAD 165
Query: 162 CDGDGTIDFEEFK 174
DG ID +E+K
Sbjct: 166 RKNDGKIDIDEWK 178
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFE 171
+++K F + D D +G I +EL +L+ D + E + ++ D DGDG I E
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 172 EFKVMM 177
EF ++
Sbjct: 101 EFSTLV 106
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELH---QVLRSLGDDCTLAECRRMIRGVDCDGDG 166
S + +++K AF D D +G I +EL QV ++ T AE + ++ D DGDG
Sbjct: 37 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDG 96
Query: 167 TIDFEEFKVMMTA 179
I EE+ ++ A
Sbjct: 97 AIGVEEWVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELH---QVLRSLGDDCTLAECRRMIRGVDCDGDG 166
S + +++K AF D D +G I +EL QV ++ T AE + ++ D DGDG
Sbjct: 36 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDG 95
Query: 167 TIDFEEFKVMMTA 179
I EE+ ++ A
Sbjct: 96 AIGVEEWVALVKA 108
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 109 DSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTI 168
D +E K+ + +D++GNG I L ++L LG T E +++I V T
Sbjct: 45 DLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF 104
Query: 169 DFEEFKVMM 177
+ +F MM
Sbjct: 105 SYPDFLRMM 113
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
++ + +FD NG+G I L +L LG T EL+K++ E+ +
Sbjct: 53 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSS 98
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFE 171
+++K F + D D +G I +EL +L+ D + E + ++ D DGDG I E
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 172 EFKVMM 177
EF ++
Sbjct: 101 EFSTLV 106
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 12/73 (16%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGD---DCTLAECRR---------MIRGV 160
V E L AF++YDI+ +G IT EE+ +++++ D CT + + +
Sbjct: 136 VQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKM 195
Query: 161 DCDGDGTIDFEEF 173
D + DG + +EF
Sbjct: 196 DKNKDGVVTIDEF 208
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFE 171
+++K F + D D +G I +EL +L+ D + E + ++ D DGDG I E
Sbjct: 41 DDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 100
Query: 172 EFKVMM 177
EF ++
Sbjct: 101 EFSTLV 106
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAA 75
++++VF+ D + DG I ELGSIL A
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDA 74
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFE 171
+++K F + D D +G I +EL +L+ D + E + ++ D DGDG I E
Sbjct: 5 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVE 64
Query: 172 EFKVMM 177
EF ++
Sbjct: 65 EFSTLV 70
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGV--------D 161
SA V E +K AF +YD+ G I EEL +++ +L + L MI + D
Sbjct: 106 SAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQAD 165
Query: 162 CDGDGTIDFEEFK 174
DG ID +E+K
Sbjct: 166 RKNDGKIDIDEWK 178
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 120 AFSVYDIDGNGSITAEELHQVLRSL---GDDCTL--AECRRMIRGV----DCDGDGTIDF 170
AF ++D D +G++ E+L +++ L G+D L +E +++I + D D DGTI+
Sbjct: 103 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 162
Query: 171 EEFKVMMTAGSRY 183
EF+ +++ +
Sbjct: 163 SEFQHVISRSPDF 175
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ ++ ++F+ +D DG + A +LG + LG E++ KM + +
Sbjct: 8 IDDLKDVFELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 64
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL +LG+ +
Sbjct: 65 FEEFLPAYEGLMDCEQGTFADYME----AFKTFDREGQGFISGAELRHVLTALGERLSDE 120
Query: 152 ECRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
+ +I+ D D +G + +E+F + AG
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 120 AFSVYDIDGNGSITAEELHQVLRSL---GDDCTL--AECRRMIRGV----DCDGDGTIDF 170
AF ++D D +G++ E+L +++ L G+D L +E +++I + D D DGTI+
Sbjct: 134 AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL 193
Query: 171 EEFKVMMTAGSRY 183
EF+ +++ +
Sbjct: 194 SEFQHVISRSPDF 206
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Query: 116 NLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFEE 172
LK+ F + D D +G I +EL L+ T +E + + D DGDG I EE
Sbjct: 42 QLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEE 101
Query: 173 FKVMMTA 179
F+ M+ +
Sbjct: 102 FQEMVQS 108
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 116 NLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFEE 172
+KD F D D +G + +EL L+ D T +E + ++ D DGDG I +E
Sbjct: 42 QVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADE 101
Query: 173 FKVMM 177
F+ M+
Sbjct: 102 FQEMV 106
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ ++ ++F+ +D DG + A +LG + LG E++ KM + +
Sbjct: 8 IDDLKDVFELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 64
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL +LG+ +
Sbjct: 65 FEEFLPAYEGLMDCEQGTFADYME----AFKTFDREGQGFISGAELRHVLTALGERLSDE 120
Query: 152 ECRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
+ +I+ D D +G + +E+F + AG
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ ++ ++F+ +D DG + A +LG + LG E++ KM + +
Sbjct: 5 IDDLKDVFELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 61
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL +LG+ +
Sbjct: 62 FEEFLPAYEGLMDCEQGTFADYME----AFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 152 ECRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
+ +I+ D D +G + +E+F + AG
Sbjct: 118 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 148
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ ++ ++F+ +D DG + A +LG + LG E++ KM + +
Sbjct: 6 IDDLKDVFELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 62
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL +LG+ +
Sbjct: 63 FEEFLPAYEGLMDCEQGTFADYME----AFKTFDREGQGFISGAELRHVLTALGERLSDE 118
Query: 152 ECRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
+ +I+ D D +G + +E+F + AG
Sbjct: 119 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 149
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 115 ENLKDAFSVYDIDGNGSITAEEL---HQVLRSLGDDCTLAE---CRRMIRGVDCDGDGTI 168
+ LK F +YD DGNGSI EL +++L TL+ + +D + DG +
Sbjct: 93 QKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGEL 152
Query: 169 DFEEF 173
EEF
Sbjct: 153 TLEEF 157
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 56/154 (36%)
Query: 47 VFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXLNTK 106
VFN FD N DG+I SE L+ +E+L+
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRW------------------------ 103
Query: 107 GVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSL----GDDCTLAE--------CR 154
AF +YD+D +G IT E+ ++ ++ G+ L E
Sbjct: 104 -------------AFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVD 150
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSRYEFADP 188
R+ +D + DG + +EF+ GS+ ADP
Sbjct: 151 RIFAMMDKNADGKLTLQEFQ----EGSK---ADP 177
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ ++ ++F+ +D DG + A +LG + LG E++ KM + +
Sbjct: 5 IDDLKDVFELFDFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 61
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL +LG+ +
Sbjct: 62 FEEFLPAYEGLMDCEQGTFADYME----AFKTFDREGQGFISGAELRHVLTALGERLSDE 117
Query: 152 ECRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
+ +I+ D D +G + +E+F + AG
Sbjct: 118 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 148
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDGTIDFE 171
+++K F + D D +G I +EL +L+ D + E + ++ D DG G I+ E
Sbjct: 41 DDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVE 100
Query: 172 EFKVMM 177
EF ++
Sbjct: 101 EFSTLV 106
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 116 NLKDAFSVYDIDGNGSITAEELHQVLRSL---GDDCTLAECRRMIRGVDCDGDGTIDFEE 172
+K+ F + D D +G I EEL VL+ G D E + ++ D D DG I +E
Sbjct: 42 QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101
Query: 173 FKVMM 177
F M+
Sbjct: 102 FAKMV 106
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 109 DSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTI 168
D +E K+ + +D++GNG I L ++L LG T E +++I V T
Sbjct: 26 DLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETF 85
Query: 169 DFEEFKVMM 177
+ +F MM
Sbjct: 86 SYPDFLRMM 94
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
++ + +FD NG+G I L +L LG T EL+K++ E+ +
Sbjct: 34 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSS 79
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 38 IPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEEL------QKMVREIDAXX 91
I D+ ++ ++F +D DG + A +LG + LG E++ KM + +
Sbjct: 8 IDDLKDVFELFAFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEK--SLP 64
Query: 92 XXXXXXXXXXXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLA 151
++ + A+ ME AF +D +G G I+ EL VL +LG+ +
Sbjct: 65 FEEFLPAYEGLMDCEQGTFADYME----AFKTFDREGQGFISGAELRHVLTALGERLSDE 120
Query: 152 ECRRMIRGVDC--DGDGTIDFEEFKVMMTAG 180
+ +I+ D D +G + +E+F + AG
Sbjct: 121 DVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 151
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 40 DVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEE 79
+V EL ++F FD N G ++ S++ +ILT+ G A T++E
Sbjct: 82 NVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQE 121
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDG 166
+++ +++K AF++ D +G I +EL L++ D T E + ++ D DGDG
Sbjct: 36 TSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 95
Query: 167 TIDFEEFKVMMTA 179
I +E+ ++ A
Sbjct: 96 KIGVDEWTALVKA 108
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 30/151 (19%)
Query: 47 VFNKFDANGDGKISASELGS-----ILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXX 101
+F+ D NG+G+I+ E+ S I +LG AT + Q R D
Sbjct: 25 MFDYLDINGNGQITLDEIVSKASDDICKNLG--ATPAQTQ---RHQDCVEAFFRGCGLEY 79
Query: 102 XLNTKGVDSAEVMENLKDA--------------------FSVYDIDGNGSITAEELHQVL 141
TK + E +NL +A F ++D DG+G+IT +E
Sbjct: 80 GKETKFPEFLEGWKNLANADLAKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG 139
Query: 142 RSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
R G + +C + + D D G +D +E
Sbjct: 140 RISGISPSEEDCEKTFQHCDLDNSGELDVDE 170
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 34.3 bits (77), Expect = 0.046, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 117 LKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
LK + + D+DG+G +T EE+ + G + + + D +GDG I EEF
Sbjct: 7 LKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLEEF 59
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 129 NGSITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAG 180
+ I+A EL +LR + D ++ C+ M+ +D DG G + +EF ++ T
Sbjct: 544 DAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKI 603
Query: 181 SRYE 184
+Y+
Sbjct: 604 QKYQ 607
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCT 149
+ L+ AFS+YD+DGNG+I+ E+ +++ ++ T
Sbjct: 107 QKLEWAFSLYDVDGNGTISKNEVLEIVXAIFKXIT 141
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 130 GSITAEELHQVLRSLGDDC-TLAECRRMIRGVDCDGDGTIDFEEFKVMM---TAGS 181
G IT ++ + D A + + R D + DGT+DF+E+ + + TAG
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGK 104
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVL------RSLGDDCTLAECRRMIRGVDCDGD 165
+V L+ AF D +G+G +TA EL + ++L D ++I+ D + D
Sbjct: 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSD 63
Query: 166 GTIDFEEF 173
G I EEF
Sbjct: 64 GKISKEEF 71
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSL 71
EL F K DANGDG ++A EL + + +L
Sbjct: 8 ELEAAFKKLDANGDGYVTALELQTFMVTL 36
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL 144
+ L+ AFS+YD+DGNG+I+ E+ +++ ++
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 129 NGSITAEELHQVLRSLGDDC-TLAECRRMIRGVDCDGDGTIDFEEFKV---MMTAG 180
+G IT +E + + A + + R D + DGT+DF+++ + M +AG
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAG 95
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL 144
+ L+ AFS+YD+DGNG+I+ E+ +++ ++
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 129 NGSITAEELHQVLRSLGDDC-TLAECRRMIRGVDCDGDGTIDFEEFKV---MMTAG 180
+G IT +E + + A + + R D + DGT+DF+++ + M +AG
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAG 95
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL 144
+ L+ AFS+YD+DGNG+I+ E+ +++ ++
Sbjct: 100 QKLEWAFSLYDVDGNGTISKNEVLEIVTAI 129
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 129 NGSITAEELHQVLRSLGDDC-TLAECRRMIRGVDCDGDGTIDFEEFKV---MMTAG 180
+G IT +E + + A + + R D + DGT+DF+E+ + M +AG
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAG 96
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 33.5 bits (75), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL 144
+ L+ AFS+YD+DGNG+I+ E+ +++ ++
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 129 NGSITAEELHQVLRSLGDDC-TLAECRRMIRGVDCDGDGTIDFEEFKV---MMTAG 180
+G IT +E + + A + + R D + DGT+DF+E+ + M +AG
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAG 95
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL 144
+ L+ AFS+YD+DGNG+I+ E+ +++ ++
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 129 NGSITAEELHQVLRSLGDDC-TLAECRRMIRGVDCDGDGTIDFEEFKV---MMTAG 180
+G IT +E + + A + + R D + DGT+DF+E+ + M +AG
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAG 95
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 24/30 (80%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL 144
+ L+ AFS+YD+DGNG+I+ E+ +++ ++
Sbjct: 99 QKLEWAFSLYDVDGNGTISKNEVLEIVTAI 128
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 129 NGSITAEELHQVLRSLGDDC-TLAECRRMIRGVDCDGDGTIDFEEFKV---MMTAG 180
+G IT +E + + A + + R D + DGT+DF+E+ + M +AG
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAG 95
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 114 MENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
++ + + F D + NGS++ E++ VL S+G + R+++ +D + G I + EF
Sbjct: 38 IKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITYTEF 95
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 36 VIIPDVHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXX 95
VI + + ++F K D N +G +S E+ ++L S+G + ++ ++++ +D
Sbjct: 33 VINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNI 90
Query: 96 XXXXXXX--LNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEEL-----HQVLRSLGDDC 148
K ++S LK AF+ D D +G I+ ++ +VL + D
Sbjct: 91 TYTEFMAGCYRWKNIESTF----LKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDN 146
Query: 149 TLAECRRMIRGVDCDG-DGTIDFEEFKVMMTA 179
+ +G+ + I F+EFK M +
Sbjct: 147 FFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 33.1 bits (74), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGD------------DCTLAECRRMIRGV 160
V E L+ F++YDI+ +G I EE+ +++++ D D + +
Sbjct: 90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 149
Query: 161 DCDGDGTIDFEEF 173
D + DG + +EF
Sbjct: 150 DKNKDGIVTLDEF 162
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 41 VHE-LRQVFNKFDANGDGKISASELGSILTSL 71
VHE LR FN +D N DG I+ E+ I+ ++
Sbjct: 90 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 121
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 33.1 bits (74), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL---GDDCTLAECRRMIRGVDCDGDGTIDFE 171
+++K F + D D +G I +EL +L+ D + E + ++ D DGDG I +
Sbjct: 42 DDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVD 101
Query: 172 EFKVMM 177
EF ++
Sbjct: 102 EFSTLV 107
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 33.1 bits (74), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 110 SAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDC---TLAECRRMIRGVDCDGDG 166
+++ +++K AF++ D +G I +EL L++ D T E + ++ D DGDG
Sbjct: 36 TSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDG 95
Query: 167 TIDFEEFKVMMTA 179
I +++ ++ A
Sbjct: 96 KIGVDDWTALVKA 108
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 129 NGSITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAG 180
+ I+A EL +LR + D ++ C+ M+ +D DG G + +EF ++ T
Sbjct: 545 DAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604
Query: 181 SRYE 184
+Y+
Sbjct: 605 QKYQ 608
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 129 NGSITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAG 180
+ I+A EL +LR + D ++ C+ M+ +D DG G + +EF ++ T
Sbjct: 545 DAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604
Query: 181 SRYE 184
+Y+
Sbjct: 605 QKYQ 608
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 129 NGSITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAG 180
+ I+A EL +LR + D ++ C+ M+ +D DG G + +EF ++ T
Sbjct: 545 DAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI 604
Query: 181 SRYE 184
+Y+
Sbjct: 605 QKYQ 608
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLGHAATEEE 79
EL + F+ FD N G ++ ++ +ILT+ G A TE+E
Sbjct: 66 ELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQE 102
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGD------------DCTLAECRRMIRGV 160
V E L+ F++YDI+ +G I EE+ +++++ D D + +
Sbjct: 123 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 182
Query: 161 DCDGDGTIDFEEF 173
D + DG + +EF
Sbjct: 183 DKNKDGIVTLDEF 195
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 41 VHE-LRQVFNKFDANGDGKISASELGSILTSL 71
VHE LR FN +D N DG I+ E+ I+ ++
Sbjct: 123 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 154
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + + VF +D + G I +EL L+ G+ +++ ++R+ D
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSI 132
+ V++ L D F YD D +G I
Sbjct: 133 -------IQGCIVLQRLTDIFRRYDTDQDGWI 157
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRSLGD------------DCTLAECRRMIRGV 160
V E L+ F++YDI+ +G I EE+ +++++ D D + +
Sbjct: 87 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 146
Query: 161 DCDGDGTIDFEEF 173
D + DG + +EF
Sbjct: 147 DKNKDGIVTLDEF 159
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 41 VHE-LRQVFNKFDANGDGKISASELGSILTSL 71
VHE LR FN +D N DG I+ E+ I+ ++
Sbjct: 87 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
F ++D DG+G+IT +E + G + +C R D D G +D +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
F ++D DG+G+IT +E + G + +C R D D G +D +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
F ++D DG+G+IT +E + G + +C R D D G +D +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDE 170
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 12/73 (16%)
Query: 113 VMENLKDAFSVYDIDGNGSITAEELHQVLRS------------LGDDCTLAECRRMIRGV 160
V E L+ F++YDI+ +G I EE+ ++++ L +D + +
Sbjct: 87 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKM 146
Query: 161 DCDGDGTIDFEEF 173
D + DG + +EF
Sbjct: 147 DKNKDGIVTLDEF 159
Score = 29.6 bits (65), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 41 VHE-LRQVFNKFDANGDGKISASELGSILTSL 71
VHE LR FN +D N DG I+ E+ I+ ++
Sbjct: 87 VHEKLRWTFNLYDINKDGYINKEEMMDIVKAI 118
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + + VF +D + G I +EL L+ G+ +++ ++R+ D
Sbjct: 92 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 151
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSI 132
+ V++ L D F YD D +G I
Sbjct: 152 -------IQGCIVLQRLTDIFRRYDTDQDGWI 176
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 115 ENLKDAFSVYDIDGNGSITAE--------ELHQVLRSLGDDCTLAECRRMIRGVDCDGDG 166
E LK F YD +G+G ++ E E +L+ + TL E + +D +GDG
Sbjct: 5 EELKGIFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGM---STLDE---LFEELDKNGDG 58
Query: 167 TIDFEEFKVMMTAGSR 182
+ FEEF+V++ S+
Sbjct: 59 EVSFEEFQVLVKKISQ 74
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + + VF +D + G I +EL L+ G+ +++ ++R+ D
Sbjct: 69 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 128
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSI 132
+ V++ L D F YD D +G I
Sbjct: 129 -------IQGCIVLQRLTDIFRRYDTDQDGWI 153
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + + VF +D + G I +EL L+ G+ +++ ++R+ D
Sbjct: 91 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 150
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSI 132
+ V++ L D F YD D +G I
Sbjct: 151 -------IQGCIVLQRLTDIFRRYDTDQDGWI 175
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + + VF +D + G I +EL L+ G+ +++ ++R+ D
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 129
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSI 132
+ V++ L D F YD D +G I
Sbjct: 130 -------IQGCIVLQRLTDIFRRYDTDQDGWI 154
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 24/150 (16%)
Query: 45 RQVFNKFDANGDGKISASEL-----GSILTSLGHAATEEELQKMVREIDA---------- 89
+ +FN D N +GKIS E+ ++ +LG AT E+ ++ ++A
Sbjct: 19 KHMFNFLDVNHNGKISLDEMVYKASDIVINNLG--ATPEQAKRHKDAVEAFFGGAGMKYG 76
Query: 90 ------XXXXXXXXXXXXXLNTKGVDSAEVMENLKDA-FSVYDIDGNGSITAEELHQVLR 142
L + ++ DA F + D D NG+IT +E +
Sbjct: 77 VETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTK 136
Query: 143 SLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
+ G + +C R D D G +D +E
Sbjct: 137 AAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
F ++D DG+G+IT +E + G + +C R D D G +D +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDLDVDE 170
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
F ++D DG+G+IT +E + G + +C R D D G +D +E
Sbjct: 119 FDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDE 170
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 129 NGSITAEELHQVLRSLG-----DDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTA--GS 181
+G I A+EL + L G L CR M+ +D D GT+ F EFK + G
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGW 105
Query: 182 RYEF 185
R F
Sbjct: 106 RQHF 109
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 129 NGSITAEELHQVLRSLG-----DDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTA--GS 181
+G I A+EL + L G L CR M+ +D D GT+ F EFK + G
Sbjct: 46 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGW 105
Query: 182 RYEF 185
R F
Sbjct: 106 RQHF 109
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 12/98 (12%)
Query: 53 ANGDGKISASELGSILTSLGHAA-----TEEELQKMVREIDAXXXXXXXXXXXXXLNTKG 107
A DG+I A EL LT G A E + MV +D L
Sbjct: 43 AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL---- 98
Query: 108 VDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG 145
V+ + F +D D +G++ +EL + L ++G
Sbjct: 99 ---WAVLNGWRQHFISFDTDRSGTVDPQELQKALTTMG 133
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 31.6 bits (70), Expect = 0.30, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
++E R FN FD G + + + L S+G+ E E +++ +D
Sbjct: 724 MNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAF 783
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVL 141
++ + + + +F + D N IT +EL + L
Sbjct: 784 IDFMSRETADTDTADQVMASFKILAGDKN-YITVDELRREL 823
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+ + +D++ G I L +++ LG T E ++MI V TI +
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 172 EFKVMMTAGSR 182
+F V M G R
Sbjct: 107 DF-VNMMLGKR 116
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREI 87
++ + +FD N +G+I L ++ LG T E++KM+ E+
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEV 95
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 112 EVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFE 171
E + K+ + +D++ G I L +++ LG T E ++MI V TI +
Sbjct: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
Query: 172 EFKVMMTAGSR 182
+F V M G R
Sbjct: 107 DF-VNMMLGKR 116
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 44 LRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREI 87
++ + +FD N +G+I L ++ LG T E++KM+ E+
Sbjct: 52 FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEV 95
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 121 FSVYDIDGNGSITAEELHQVL---RSLGDDCTLAECRRMIRGVDCDGDGTIDFEEF 173
F D++G+G+++ EE+ + R++ ++ L + + + +D DG+G ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLL---QLIFKSIDADGNGEIDQNEF 58
Score = 30.0 bits (66), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 47 VFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDA 89
+F + D NGDG +S E+ + ++ E+ LQ + + IDA
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDA 47
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 111 AEVMENLKDAFSVYDIDGNGSITAEELHQVL----RSLGDDCTLAE--------CRRMIR 158
E+ + L AF +YD+D NG I+ +E+ +++ + +G L E ++
Sbjct: 95 GELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFN 154
Query: 159 GVDCDGDGTIDFEEF 173
+D + DG + EEF
Sbjct: 155 MMDKNKDGQLTLEEF 169
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 129 NGSITAEELHQVLRSL---GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRYEF 185
+G + E ++ + GD AE + D D +G IDF+EF ++ SR E
Sbjct: 40 SGHLNKSEFQKIYKQFFPFGDPSAFAE--YVFNVFDADKNGYIDFKEFICALSVTSRGEL 97
Query: 186 ADPV 189
D +
Sbjct: 98 NDKL 101
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 129 NGSITAEELHQVLRSLG-----DDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTA--GS 181
+G I A+EL + L G L CR M+ +D D GT+ F EFK + G
Sbjct: 15 DGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGW 74
Query: 182 RYEF 185
R F
Sbjct: 75 RQHF 78
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 12/98 (12%)
Query: 53 ANGDGKISASELGSILTSLGHAA-----TEEELQKMVREIDAXXXXXXXXXXXXXLNTKG 107
A DG+I A EL LT G A E + MV +D L
Sbjct: 12 AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKEL---- 67
Query: 108 VDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG 145
V+ + F +D D +G++ +EL + L ++G
Sbjct: 68 ---WAVLNGWRQHFISFDSDRSGTVDPQELQKALTTMG 102
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 106 KGVDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSL--------GDDCTLAECRRMI 157
K + E+ +N K FS D + I+ +EL +L + + +L CR M+
Sbjct: 525 KVLSEEEIDDNFKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMV 583
Query: 158 RGVDCDGDGTIDFEEFKVMMTAGSRY 183
+D DG+G + EF ++ Y
Sbjct: 584 NLMDRDGNGKLGLVEFNILWNRIRNY 609
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 153 CRRMIRGVDCDGDGTIDFEEFKVMMTAGSRYE 184
CR M+ +D D G + FEEFK + +++
Sbjct: 776 CRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQ 807
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 30/153 (19%)
Query: 45 RQVFNKFDANGDGKISASEL-----GSILTSLGHAATEEELQKMVREIDAXXXXXXXXXX 99
+ +FN D N +G+IS E+ ++ +LG AT E+ + R DA
Sbjct: 19 KHMFNFLDVNHNGRISLDEMVYKASDIVINNLG--ATPEQAK---RHKDAVEAFFGGAGM 73
Query: 100 XXXLNTKGVDSAEVMENLK-------------------DA-FSVYDIDGNGSITAEELHQ 139
+ T+ + E + L DA F + D D NG+I+ +E
Sbjct: 74 KYGVETEWPEYIEGWKRLASEELKRYSKNQITLIRLWGDALFDIIDKDQNGAISLDEWKA 133
Query: 140 VLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
+S G + +C R D D G +D +E
Sbjct: 134 YTKSAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 153 CRRMIRGVDCDGDGTIDFEEFKVMMTAGSRYE 184
CR M+ +D D G + FEEFK + R++
Sbjct: 60 CRSMVAVMDSDTTGKLGFEEFKYLWNNIKRWQ 91
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + + VF +D + G I +EL L+ G+ +++ ++R+ D
Sbjct: 73 ITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSI 132
+ V++ L D F YD D +G I
Sbjct: 133 -------IQGCIVLQRLTDIFRRYDTDQDGWI 157
>pdb|4E4U|A Chain A, Crystal Structure Of A Putative Mandelate RacemaseMUCONATE
Lactonizing Enzyme (Target Psi-200780) From Burkholderia
Sar-1
Length = 412
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGD 165
EN+K F+ D G TA HQ+ + D C L CRR+ V D
Sbjct: 154 ENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELF-CRRVREAVGSKAD 203
>pdb|1UHH|A Chain A, Crystal Structure Of Cp-Aequorin
pdb|1UHH|B Chain B, Crystal Structure Of Cp-Aequorin
pdb|1UHJ|A Chain A, Crystal Structure Of Br-Aequorin
pdb|1UHJ|B Chain B, Crystal Structure Of Br-Aequorin
Length = 191
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
F + D D NG+IT +E ++ G + +C R D D G +D +E
Sbjct: 115 FDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDE 166
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 117 LKDAFSVY---DIDGNGSITAEELHQVLRSLGDDCTLAECRR----MIRGVDCDGDGTID 169
LK F Y + D N ++ EEL Q++++ + +L + R + + +D +GDG +
Sbjct: 9 LKSIFEKYAAKEGDPN-QLSKEELKQLIQA--EFPSLLKGPRTLDDLFQELDKNGDGEVS 65
Query: 170 FEEFKVMMTAGSR 182
FEEF+V++ S+
Sbjct: 66 FEEFQVLVKKISQ 78
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 45 RQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMV 84
+ +F FD G G I+ LG L ++G+ T + +Q ++
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 118 KDAFSVYDIDGNGSITAEELHQVLRSLG 145
KD F+++D G G+I + L LR++G
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIG 34
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 30.4 bits (67), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 17/75 (22%)
Query: 116 NLKDAFSVYDIDGNGSITAEELHQVLRS---LGDDCTL---AECR-----------RMIR 158
LK F +YD D NG I +EL ++ S L C++ AE + R+
Sbjct: 96 KLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFL 155
Query: 159 GVDCDGDGTIDFEEF 173
VD +GDG + EF
Sbjct: 156 LVDENGDGQLSLNEF 170
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 117 LKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVM 176
L A V D DG+G++T + + L + G LA R+ +D DGDG + E +
Sbjct: 100 LHAALGVADTDGDGAVTVADTARALTAFGVPEDLA--RQAAAALDTDGDGKVGETE---I 154
Query: 177 MTAGSRY 183
+ A +RY
Sbjct: 155 VPAFARY 161
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 30.0 bits (66), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 117 LKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTI 168
L A V D DG+G++T + + L + G LA R+ +D DGDG +
Sbjct: 100 LHAALGVADTDGDGAVTVADTARALTAFGVPEDLA--RQAAAALDTDGDGKV 149
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 30.0 bits (66), Expect = 0.92, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSLG 145
E L +AF ++D + +G I EEL ++LR+ G
Sbjct: 5 EELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 29.6 bits (65), Expect = 1.1, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSLG 72
EL F FD N DG I ELG IL + G
Sbjct: 6 ELANAFRIFDKNADGYIDIEELGEILRATG 35
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 115 ENLKDAFSVYDIDGNGSITAEELHQVLRSL-------GDDCTLAECR-RMIRGVDCDGDG 166
E + YD D +G I EEL L+ L DD LAE M++ D + DG
Sbjct: 103 EEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDG 162
Query: 167 TIDFEEFKVMM 177
++ E ++
Sbjct: 163 KLELTEMARLL 173
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 120 AFSVYDIDGNGSITAEELHQVLRSL 144
AF +YD DGNG I EL +L+ L
Sbjct: 196 AFELYDQDGNGYIDENELDALLKDL 220
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 24/154 (15%)
Query: 41 VHELRQVFNKFDANGDGKISASELGS-----ILTSLGHAATEEELQKMVREIDAXXXXX- 94
V+ + +FN D NG+GKI+ E+ S I LG AT + Q+ ++A
Sbjct: 22 VNRHKFMFNFLDINGNGKITLDEIVSKASDDICAKLG--ATPAQTQRHQEAVEAFFKKIG 79
Query: 95 ---------------XXXXXXXXLNTKGVDSAEVMENLKDA-FSVYDIDGNGSITAEELH 138
L + ++ N +A F ++D DG+GSI+ +E
Sbjct: 80 LDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWK 139
Query: 139 QVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
G + + + + D D G +D +E
Sbjct: 140 TYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 132 ITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRY 183
++A EL +L + D + CR M+ +D D G + FEEFK + ++
Sbjct: 31 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 90
Query: 184 E 184
+
Sbjct: 91 Q 91
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D DGDG +DF+E+ V++ A
Sbjct: 56 KVMKELDEDGDGEVDFQEYVVLVAA 80
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 132 ITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRY 183
++A EL +L + D + CR M+ +D D G + FEEFK + ++
Sbjct: 20 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 79
Query: 184 E 184
+
Sbjct: 80 Q 80
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 132 ITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRY 183
++A EL +L + D + CR M+ +D D G + FEEFK + ++
Sbjct: 20 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 79
Query: 184 E 184
+
Sbjct: 80 Q 80
>pdb|1QLS|A Chain A, S100c (S100a11),Or Calgizzarin, In Complex With Annexin I
N-Terminus
Length = 99
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 155 RMIRGVDCDGDGTIDFEEF 173
RM++ +D D DG +DF+EF
Sbjct: 60 RMMKKLDLDSDGQLDFQEF 78
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 43 ELRQVFNKFDANGDGKISASELGSILTSL 71
E +++ K+DA+ G ISA+EL + L L
Sbjct: 105 EFXKIWRKYDADSSGYISAAELKNFLKDL 133
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 20/25 (80%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GDG +DF+EF V++ A
Sbjct: 56 KIMKELDENGDGEVDFQEFVVLVAA 80
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 132 ITAEELHQVLRSL--------GDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRY 183
++A EL +L + D + CR M+ +D D G + FEEFK + ++
Sbjct: 27 VSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKW 86
Query: 184 E 184
+
Sbjct: 87 Q 87
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 23/52 (44%)
Query: 121 FSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVDCDGDGTIDFEE 172
F+V+D D NG I EE VL + + D + DG I F+E
Sbjct: 69 FTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDE 120
>pdb|2NR7|A Chain A, Structural Genomics, The Crystal Structure Of Putative
Secretion Activator Protein From Porphyromonas
Gingivalis W83
Length = 195
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 148 CTLAECRRMIRGVDCDGDGTIDFEEFKVM 176
T+A +R+ G D DGDG ID E+ K++
Sbjct: 36 VTIATWKRV--GYDKDGDGDIDVEDLKLL 62
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 20/25 (80%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GDG +DF+E+ V++ A
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 20/25 (80%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GDG +DF+E+ V++ A
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 108 VDSAEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLG-DDCTLAECRRMIRGVDCDGDG 166
+D E + L FS+ ITAE L + LG + + + + M+R D DGDG
Sbjct: 33 MDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDG 92
Query: 167 TIDFEEFKVMM 177
++ EF V+M
Sbjct: 93 ALNQTEFCVLM 103
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 52 DANGDGKISASELGSILTSLGHAATE 77
D N DG+I+A E + LT+LG + E
Sbjct: 112 DKNADGQINADEFAAWLTALGMSKAE 137
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 115 ENLKDAFSVYDIDGNGSIT----AEELHQVLRSLGDDCTLAECRRM 156
+ LK F +D DGNG++ +E + + G D AE + +
Sbjct: 7 DRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTL 52
>pdb|3EZJ|A Chain A, Crystal Structure Of The N-Terminal Domain Of The Secretin
Gspd From Etec Determined With The Assistance Of A
Nanobody
pdb|3EZJ|C Chain C, Crystal Structure Of The N-Terminal Domain Of The Secretin
Gspd From Etec Determined With The Assistance Of A
Nanobody
pdb|3EZJ|E Chain E, Crystal Structure Of The N-Terminal Domain Of The Secretin
Gspd From Etec Determined With The Assistance Of A
Nanobody
pdb|3EZJ|G Chain G, Crystal Structure Of The N-Terminal Domain Of The Secretin
Gspd From Etec Determined With The Assistance Of A
Nanobody
Length = 241
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 41 VHELRQVFNKF-DANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXX 99
V EL + + D+ G G + + +++ G A+ E L ++++ +D
Sbjct: 119 VRELAPILRQMIDSAGSGNVVNYDPSNVIMLTGRASVVERLTEVIQRVDHAGNRTEEVIP 178
Query: 100 XXXLNTKGVDSAEVMENL-KDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIR 158
N + A V+E+L K++ I A+E + GD T + RR+IR
Sbjct: 179 LD--NASASEIARVLESLTKNSGENQPATLKSQIVADERTNSVIVSGDPATRDKMRRLIR 236
Query: 159 GVDCD 163
+D +
Sbjct: 237 RLDSE 241
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 103 LNTKGVDS-AEVMENLKDAFSVYDIDGNGSITAEELHQVLRSLGDDCTLAECRRMIRGVD 161
L +G D E + L+ F+ D + +G + EE + L A+ + + +D
Sbjct: 14 LYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLD 71
Query: 162 CDGDGTIDFEEF 173
D DG I F+EF
Sbjct: 72 ADRDGAITFQEF 83
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of Human
Apo-S100a1 E32q Mutant
Length = 93
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 20/25 (80%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GDG +DF+E+ V++ A
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous Factor
Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide Bond
Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 20/25 (80%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GDG +DF+E+ V++ A
Sbjct: 56 KVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 15/150 (10%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAA------TEEELQKMVREIDAXXXXX 94
+ +++ + D GDG IS + I + A EE Q+ +R D
Sbjct: 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAP 72
Query: 95 XXXXXXXXLNTKGVDSAEVMENLKDAFSVY---------DIDGNGSITAEELHQVLRSLG 145
DS M+ + A +V D D +G ++ E L+++G
Sbjct: 73 GVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVG 132
Query: 146 DDCTLAECRRMIRGVDCDGDGTIDFEEFKV 175
D T + +D + +G I +EF V
Sbjct: 133 PDLTDDKAITCFNTLDFNKNGQISRDEFLV 162
>pdb|2W1V|A Chain A, Crystal Structure Of Mouse Nitrilase-2 At 1.4a Resolution
pdb|2W1V|B Chain B, Crystal Structure Of Mouse Nitrilase-2 At 1.4a Resolution
Length = 276
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 109 DSAEVMENLKDAFSVYDIDGNGSITAE---ELHQVLRSLGDDCTLAECRRMIRGVDCDGD 165
+S + + + S+Y I GSI E +L+ G D +L R I D D
Sbjct: 64 ESTQKLSEVAKESSIYLI--GGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVP 121
Query: 166 GTIDFEEFKVMMTAGSRYEFADP 188
G I F+E K + S F P
Sbjct: 122 GKITFQESKTLSPGDSFSTFDTP 144
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 20/25 (80%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GDG +DF+E+ V++ A
Sbjct: 57 KVMKELDENGDGEVDFQEYVVLVAA 81
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1OZO|A Chain A, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
pdb|1OZO|B Chain B, Three-Dimensional Solution Structure Of Apo-S100p Protein
Determined By Nmr Spectroscopy
Length = 95
Score = 27.3 bits (59), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GD +DF EF V + A
Sbjct: 56 KLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 26/161 (16%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQ-KMVREIDAXXXXXXXXXX 99
V +++ FN+ D + DG I+ + S+ A E E++ + + +
Sbjct: 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERF---AKESEMKAEHAKVLMDSLTGVWDNFL 61
Query: 100 XXXLNTKGVDSAEVMENLKDA-----------------FSVYDIDGNGSITAEELHQVLR 142
KG+D + ++K+ F D + + +I+ +E
Sbjct: 62 TAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFG 121
Query: 143 SLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRY 183
LG D T+A +D + DG + EEF + AGS +
Sbjct: 122 MLGLDKTMAPAS--FDAIDTNNDGLLSLEEFVI---AGSDF 157
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 16/78 (20%)
Query: 115 ENLKDAFSVY-DIDGNGS---------ITAEELHQVLRSLGDDCTLAECRRMIRGVDCDG 164
E LK F Y D +G+G+ + E +L+ + TL E + +D +G
Sbjct: 5 EELKGIFEKYADKEGDGNQLSKEELKLLLQTEFPSLLKGM---STLDE---LFEELDKNG 58
Query: 165 DGTIDFEEFKVMMTAGSR 182
DG + FEEF+V++ S+
Sbjct: 59 DGEVSFEEFQVLVKKISQ 76
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 52 ELFEELDKNGDGEVSFEEFQVLVKKISQ 79
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1J55|A Chain A, The Crystal Structure Of Ca+-Bound Human S100p Determined
At 2.0a Resolution By X-Ray
Length = 95
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTA 179
++++ +D +GD +DF EF V + A
Sbjct: 56 KLLKDLDANGDAQVDFSEFIVFVAA 80
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKKISQ 75
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 155 RMIRGVDCDGDGTIDFEEFKVMMTAGSR 182
+ +D +GDG + FEEF+V++ S+
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKKISQ 76
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 26.9 bits (58), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 41 VHELRQVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXX 100
+ + + VF +D + G I +EL L+ G+ +++ ++R+ D
Sbjct: 70 ITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQGRGQIAFDDF 127
Query: 101 XXLNTKGVDSAEVMENLKDAFSVYDIDGNGSI 132
+ V++ L D F YD D +G I
Sbjct: 128 -------IQGCIVLQRLTDIFRRYDTDQDGWI 152
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 156 MIRGVDCDGDGTIDFEEFK 174
+ +G+D GDG +D EEF+
Sbjct: 110 LFKGMDVSGDGIVDLEEFQ 128
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 26.6 bits (57), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 42 HELRQVFNKFDANGDGKISASELGSIL 68
+ LR F+ D N DG+++A E+ I+
Sbjct: 98 NRLRTFFDMVDKNADGRLTAEEVKEII 124
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 26.6 bits (57), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 16/147 (10%)
Query: 46 QVFNKFDANGDGKISASELGSILTSLGHAATEEELQKMVREIDAXXXXXXXXXXXXXLNT 105
++F KFD N GK+ E + + +E VR+I N
Sbjct: 52 ELFKKFDKNETGKLXYDE---VYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENK 108
Query: 106 KGVDSAEVME------------NLKDAFSVYDIDGNGSITAEELHQVLRSL-GDDCTLAE 152
D E +E L F D GN + EE + + L + +
Sbjct: 109 GSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVED 168
Query: 153 CRRMIRGVDCDGDGTIDFEEFKVMMTA 179
+ + +D +G G++ F+EF +A
Sbjct: 169 PAALFKELDKNGTGSVTFDEFAAWASA 195
>pdb|1A6X|A Chain A, Structure Of The Apo-Biotin Carboxyl Carrier Protein (Apo-
Bccp87) Of Escherichia Coli Acetyl-Coa Carboxylase, Nmr,
49 Structures
Length = 87
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 143 SLGDDCTLAECRRMIRGVDCDGDGTIDFEEFKVMMTAGSRYEFADPV 189
++GD + E +M+ ++ D GT+ +++ +G EF +P+
Sbjct: 41 NVGDTLCIVEAMKMMNQIEADKSGTVK----AILVESGQPVEFDEPL 83
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 51 FDANGDGKISASELG-----SILTSLGHAATEEELQKMVRE 86
DANG + A +LG SI +EEE+Q+M++E
Sbjct: 447 IDANGIVHVRAKDLGTNKEQSITIKSSSGLSEEEIQRMIKE 487
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,931,334
Number of Sequences: 62578
Number of extensions: 166597
Number of successful extensions: 1863
Number of sequences better than 100.0: 357
Number of HSP's better than 100.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 585
Number of HSP's gapped (non-prelim): 855
length of query: 195
length of database: 14,973,337
effective HSP length: 94
effective length of query: 101
effective length of database: 9,091,005
effective search space: 918191505
effective search space used: 918191505
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)