Query 029314
Match_columns 195
No_of_seqs 197 out of 1355
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 17:50:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029314.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029314hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dy0_A APRT, adenine phosphori 100.0 3.7E-32 1.3E-36 216.3 21.5 179 7-189 9-187 (190)
2 1g2q_A Adenine phosphoribosylt 100.0 9.6E-31 3.3E-35 207.7 19.1 156 11-166 5-164 (187)
3 1zn8_A APRT, adenine phosphori 100.0 1.3E-30 4.5E-35 205.5 19.1 170 11-186 4-176 (180)
4 1qb7_A APRT, adenine phosphori 100.0 1.6E-30 5.4E-35 213.7 19.6 177 7-187 13-203 (236)
5 1l1q_A Adenine phosphoribosylt 100.0 2.8E-30 9.7E-35 204.9 20.1 169 11-183 3-174 (186)
6 1vch_A Phosphoribosyltransfera 99.9 3.6E-25 1.2E-29 173.3 12.5 150 15-166 7-162 (175)
7 1y0b_A Xanthine phosphoribosyl 99.9 2.7E-23 9.2E-28 165.7 19.9 170 13-186 4-178 (197)
8 3m3h_A OPRT, oprtase, orotate 99.9 1.9E-23 6.5E-28 171.2 16.4 143 28-188 50-197 (234)
9 1o57_A PUR operon repressor; p 99.9 3.9E-23 1.3E-27 174.5 18.3 152 32-189 101-255 (291)
10 3dez_A OPRT, oprtase, orotate 99.9 2.4E-23 8.4E-28 171.4 16.4 144 28-189 62-210 (243)
11 2yzk_A OPRT, oprtase, orotate 99.9 8.7E-23 3E-27 160.7 16.0 137 32-188 27-165 (178)
12 2wns_A Orotate phosphoribosylt 99.9 1E-22 3.5E-27 163.8 16.4 138 32-188 31-170 (205)
13 2p1z_A Phosphoribosyltransfera 99.9 8.1E-23 2.8E-27 161.2 15.4 138 32-188 34-173 (180)
14 3qw4_B UMP synthase; N-termina 99.9 3.4E-22 1.2E-26 177.7 18.5 150 21-189 272-425 (453)
15 3mjd_A Orotate phosphoribosylt 99.9 3.6E-22 1.2E-26 163.4 16.6 147 28-189 44-204 (232)
16 2aee_A OPRT, oprtase, orotate 99.9 6.1E-22 2.1E-26 159.7 16.7 140 32-189 37-178 (211)
17 2ps1_A Orotate phosphoribosylt 99.9 1.7E-21 6E-26 158.7 15.7 143 32-189 37-196 (226)
18 3n2l_A OPRT, oprtase, orotate 99.9 2.7E-21 9.4E-26 158.6 15.5 142 32-189 58-209 (238)
19 1lh0_A OMP synthase; loop clos 99.9 3.9E-21 1.3E-25 155.4 13.8 142 32-189 33-184 (213)
20 3hvu_A Hypoxanthine phosphorib 99.8 2.3E-20 7.7E-25 150.1 11.6 134 22-165 16-157 (204)
21 1fsg_A HGPRTASE, hypoxanthine- 99.8 4.4E-20 1.5E-24 151.1 8.8 144 22-165 31-183 (233)
22 1vdm_A Purine phosphoribosyltr 99.8 3.9E-19 1.3E-23 135.9 12.5 120 39-166 4-125 (153)
23 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 3.4E-19 1.2E-23 144.4 10.4 133 23-165 18-167 (217)
24 1hgx_A HGXPRTASE, hypoxanthine 99.8 5.9E-19 2E-23 139.1 10.6 125 33-165 7-136 (183)
25 3ozf_A Hypoxanthine-guanine-xa 99.8 5.1E-19 1.8E-23 146.0 8.9 140 26-165 49-197 (250)
26 2jbh_A Phosphoribosyltransfera 99.8 1.5E-18 5.3E-23 141.2 10.3 132 24-165 27-175 (225)
27 3o7m_A Hypoxanthine phosphorib 99.8 2.8E-18 9.7E-23 136.0 11.1 122 34-165 6-135 (186)
28 2geb_A Hypoxanthine-guanine ph 99.8 5.9E-18 2E-22 133.7 11.6 122 36-165 12-139 (185)
29 1pzm_A HGPRT, hypoxanthine-gua 99.7 7.4E-18 2.5E-22 136.0 11.0 123 34-165 21-159 (211)
30 1a3c_A PYRR, pyrimidine operon 99.7 7.6E-18 2.6E-22 132.3 10.0 125 36-164 3-139 (181)
31 1yfz_A Hypoxanthine-guanine ph 99.7 1.2E-17 4.1E-22 134.0 10.6 122 36-165 32-159 (205)
32 1tc1_A Protein (hypoxanthine p 99.7 3E-17 1E-21 133.3 13.0 123 35-165 6-144 (220)
33 2ywu_A Hypoxanthine-guanine ph 99.7 8.5E-17 2.9E-21 127.0 11.8 120 39-165 12-136 (181)
34 1nul_A XPRT, xanthine-guanine 99.7 6.2E-17 2.1E-21 124.1 9.9 111 39-165 5-117 (152)
35 1ufr_A TT1027, PYR mRNA-bindin 99.7 7.9E-17 2.7E-21 126.6 10.3 120 39-164 6-137 (181)
36 3ohp_A Hypoxanthine phosphorib 99.7 1.6E-16 5.6E-21 124.9 12.1 120 39-165 7-132 (177)
37 1wd5_A Hypothetical protein TT 99.7 8.4E-16 2.9E-20 123.3 12.1 118 45-164 9-160 (208)
38 1w30_A PYRR bifunctional prote 99.7 1.6E-15 5.3E-20 121.5 13.0 122 38-165 14-154 (201)
39 3lrt_A Ribose-phosphate pyroph 99.6 3.8E-15 1.3E-19 125.2 14.9 117 52-187 144-261 (286)
40 2xbu_A Hypoxanthine-guanine ph 99.6 3.2E-15 1.1E-19 121.4 13.2 126 38-165 6-161 (221)
41 3acd_A Hypoxanthine-guanine ph 99.6 1.9E-14 6.4E-19 113.5 13.8 118 38-166 11-137 (181)
42 1u9y_A RPPK;, ribose-phosphate 99.6 9E-15 3.1E-19 122.9 11.7 119 51-186 144-263 (284)
43 3s5j_B Ribose-phosphate pyroph 99.6 2.4E-14 8.1E-19 122.2 13.4 120 49-185 151-270 (326)
44 1ecf_A Glutamine phosphoribosy 99.6 1.4E-14 4.7E-19 130.4 12.1 116 44-161 277-396 (504)
45 1dku_A Protein (phosphoribosyl 99.5 8.4E-14 2.9E-18 118.6 13.0 87 60-159 166-252 (317)
46 2ji4_A Phosphoribosyl pyrophos 99.5 7E-14 2.4E-18 121.7 12.1 114 49-162 179-310 (379)
47 1ao0_A Glutamine phosphoribosy 99.5 8.9E-14 3.1E-18 123.8 10.7 115 45-161 258-375 (459)
48 3dah_A Ribose-phosphate pyroph 99.5 2.1E-13 7.3E-18 116.1 12.4 107 61-184 166-272 (319)
49 1dqn_A Guanine phosphoribosylt 99.4 1.1E-13 3.7E-18 113.0 6.9 112 38-165 33-154 (230)
50 1i5e_A Uracil phosphoribosyltr 99.2 1E-10 3.5E-15 94.0 12.6 134 8-164 7-164 (209)
51 1o5o_A Uracil phosphoribosyltr 99.1 6.4E-10 2.2E-14 90.1 13.2 135 7-164 18-176 (221)
52 2ehj_A Uracil phosphoribosyltr 99.1 3.1E-09 1.1E-13 85.3 15.6 154 8-192 6-184 (208)
53 2e55_A Uracil phosphoribosyltr 99.0 1.5E-08 5.1E-13 81.3 16.3 133 8-164 5-161 (208)
54 1v9s_A Uracil phosphoribosyltr 99.0 3.8E-09 1.3E-13 84.8 12.0 134 8-164 6-163 (208)
55 1bd3_D Uprtase, uracil phospho 98.8 2E-08 7E-13 82.3 9.5 90 64-164 105-198 (243)
56 3dmp_A Uracil phosphoribosyltr 98.7 3.7E-08 1.3E-12 79.4 8.5 110 64-192 80-192 (217)
57 1xtt_A Probable uracil phospho 98.5 5.5E-07 1.9E-11 72.5 9.4 113 64-192 74-194 (216)
58 1u9y_A RPPK;, ribose-phosphate 72.7 20 0.00068 29.1 8.7 71 72-156 9-82 (284)
59 3dah_A Ribose-phosphate pyroph 71.7 30 0.001 28.7 9.7 73 70-156 14-90 (319)
60 3to5_A CHEY homolog; alpha(5)b 66.3 6.8 0.00023 28.1 4.1 31 123-156 11-41 (134)
61 3s5j_B Ribose-phosphate pyroph 60.1 42 0.0014 28.0 8.4 72 72-157 12-87 (326)
62 3lrt_A Ribose-phosphate pyroph 57.2 26 0.00089 28.6 6.5 69 73-157 10-82 (286)
63 1qys_A TOP7; alpha-beta, novel 50.1 22 0.00076 23.5 4.0 52 139-190 32-85 (106)
64 3f6p_A Transcriptional regulat 49.9 26 0.0009 23.2 4.7 27 124-153 2-28 (120)
65 3gl9_A Response regulator; bet 48.4 28 0.00097 23.1 4.7 27 125-154 3-29 (122)
66 3eod_A Protein HNR; response r 47.8 30 0.001 23.0 4.8 29 123-154 6-34 (130)
67 2ji4_A Phosphoribosyl pyrophos 46.8 62 0.0021 27.4 7.5 70 73-156 39-115 (379)
68 3h5i_A Response regulator/sens 43.5 34 0.0012 23.2 4.5 28 123-153 4-31 (140)
69 3mm4_A Histidine kinase homolo 43.5 38 0.0013 25.2 5.2 28 122-152 59-86 (206)
70 1r6j_A Syntenin 1; PDZ, membra 43.4 22 0.00075 23.3 3.3 34 121-154 41-74 (82)
71 1dku_A Protein (phosphoribosyl 42.7 1.4E+02 0.0048 24.5 10.3 76 69-158 15-94 (317)
72 1tmy_A CHEY protein, TMY; chem 40.2 51 0.0018 21.3 4.9 28 124-154 2-29 (120)
73 3lte_A Response regulator; str 39.4 44 0.0015 22.1 4.5 28 123-153 5-32 (132)
74 2ayx_A Sensor kinase protein R 38.4 23 0.00077 27.6 3.2 33 121-156 8-40 (254)
75 1dcf_A ETR1 protein; beta-alph 36.5 60 0.002 21.7 4.9 28 123-153 6-33 (136)
76 4hwg_A UDP-N-acetylglucosamine 36.5 49 0.0017 27.8 5.2 48 43-90 76-123 (385)
77 3ixl_A Amdase, arylmalonate de 36.4 81 0.0028 24.6 6.2 47 42-88 44-102 (240)
78 2j48_A Two-component sensor ki 36.3 60 0.0021 20.5 4.7 10 125-134 2-11 (119)
79 3m6m_D Sensory/regulatory prot 35.8 45 0.0015 22.8 4.2 28 123-153 13-40 (143)
80 3gt7_A Sensor protein; structu 35.6 55 0.0019 22.6 4.7 28 123-153 6-33 (154)
81 3rsc_A CALG2; TDP, enediyne, s 35.6 89 0.0031 25.5 6.7 41 50-91 107-147 (415)
82 3ia7_A CALG4; glycosysltransfe 35.5 99 0.0034 24.9 6.9 40 50-90 91-130 (402)
83 2jtq_A Phage shock protein E; 35.4 61 0.0021 20.4 4.5 32 122-156 39-70 (85)
84 3hix_A ALR3790 protein; rhodan 34.6 38 0.0013 22.6 3.5 32 122-156 50-81 (106)
85 3h1g_A Chemotaxis protein CHEY 34.3 44 0.0015 22.2 3.9 28 123-153 4-31 (129)
86 1o63_A ATP phosphoribosyltrans 33.9 14 0.00048 29.2 1.3 19 131-156 147-165 (219)
87 3hdv_A Response regulator; PSI 33.9 64 0.0022 21.4 4.7 30 123-155 6-35 (136)
88 1ve4_A ATP phosphoribosyltrans 33.2 15 0.00051 28.8 1.3 25 132-165 153-177 (206)
89 3foj_A Uncharacterized protein 32.8 84 0.0029 20.4 5.0 29 121-152 53-81 (100)
90 3t6k_A Response regulator rece 32.4 74 0.0025 21.4 4.8 27 124-153 4-30 (136)
91 2iya_A OLEI, oleandomycin glyc 32.0 1.1E+02 0.0038 25.1 6.7 39 50-90 98-136 (424)
92 3hzh_A Chemotaxis response reg 32.0 66 0.0023 22.3 4.6 30 123-155 35-64 (157)
93 3tum_A Shikimate dehydrogenase 32.0 63 0.0022 25.9 5.0 32 122-157 123-154 (269)
94 3t4e_A Quinate/shikimate dehyd 31.9 70 0.0024 26.3 5.3 36 122-164 146-181 (312)
95 3grc_A Sensor protein, kinase; 31.8 75 0.0026 21.2 4.8 28 123-153 5-32 (140)
96 1z7m_E ATP phosphoribosyltrans 31.4 13 0.00046 29.0 0.7 25 132-165 155-179 (208)
97 4dad_A Putative pilus assembly 31.4 52 0.0018 22.3 3.9 31 122-155 18-49 (146)
98 3s2u_A UDP-N-acetylglucosamine 31.2 88 0.003 25.6 5.9 35 56-90 87-121 (365)
99 3ilm_A ALR3790 protein; rhodan 30.7 47 0.0016 23.6 3.6 32 121-155 53-84 (141)
100 3kto_A Response regulator rece 30.5 66 0.0023 21.5 4.3 29 124-155 6-34 (136)
101 2iyf_A OLED, oleandomycin glyc 30.5 1.3E+02 0.0046 24.6 7.0 40 50-91 93-132 (430)
102 4h89_A GCN5-related N-acetyltr 30.3 1.1E+02 0.0037 21.5 5.6 41 140-185 110-150 (173)
103 3i42_A Response regulator rece 29.5 59 0.002 21.3 3.8 10 125-134 4-13 (127)
104 3dfz_A SIRC, precorrin-2 dehyd 29.5 73 0.0025 24.9 4.8 30 122-155 29-58 (223)
105 1kyq_A Met8P, siroheme biosynt 29.3 82 0.0028 25.4 5.2 32 122-157 11-42 (274)
106 1mb3_A Cell division response 29.3 88 0.003 20.2 4.7 13 125-137 2-14 (124)
107 3gge_A PDZ domain-containing p 29.2 73 0.0025 21.5 4.1 42 120-161 46-87 (95)
108 3iwh_A Rhodanese-like domain p 28.8 86 0.0029 20.9 4.5 32 121-155 53-84 (103)
109 3gk5_A Uncharacterized rhodane 28.4 72 0.0025 21.2 4.1 29 121-152 52-80 (108)
110 3iwt_A 178AA long hypothetical 27.7 1.6E+02 0.0055 21.5 6.3 19 142-160 44-62 (178)
111 3kyj_B CHEY6 protein, putative 27.7 64 0.0022 21.8 3.9 25 123-150 12-36 (145)
112 2b4a_A BH3024; flavodoxin-like 27.5 1E+02 0.0035 20.5 4.8 28 122-152 13-40 (138)
113 3g8w_A Lactococcal prophage PS 27.0 1.5E+02 0.0051 20.1 6.2 43 139-187 102-144 (169)
114 1tiq_A Protease synthase and s 26.8 1.3E+02 0.0044 21.2 5.6 44 137-186 108-152 (180)
115 1mvo_A PHOP response regulator 26.5 1E+02 0.0035 20.3 4.7 27 124-153 3-29 (136)
116 3otg_A CALG1; calicheamicin, T 26.5 88 0.003 25.4 5.1 38 51-90 120-157 (412)
117 2vd3_A ATP phosphoribosyltrans 26.1 23 0.0008 29.1 1.3 18 132-156 160-177 (289)
118 3fet_A Electron transfer flavo 26.1 1.1E+02 0.0037 22.6 5.0 41 47-89 57-98 (166)
119 2a9o_A Response regulator; ess 26.0 1E+02 0.0035 19.6 4.5 11 126-136 3-13 (120)
120 3eul_A Possible nitrate/nitrit 26.0 90 0.0031 21.2 4.4 27 123-152 14-40 (152)
121 3hv2_A Response regulator/HD d 26.0 98 0.0033 21.1 4.6 28 123-153 13-40 (153)
122 3gd5_A Otcase, ornithine carba 26.0 82 0.0028 26.2 4.7 67 75-154 116-184 (323)
123 3snk_A Response regulator CHEY 25.8 72 0.0025 21.2 3.8 26 123-151 13-38 (135)
124 1h3d_A ATP-phosphoribosyltrans 25.6 23 0.00079 29.2 1.2 18 132-156 169-186 (299)
125 4fzr_A SSFS6; structural genom 25.4 95 0.0032 25.3 5.0 37 52-90 114-150 (398)
126 2rjn_A Response regulator rece 24.9 1.2E+02 0.0041 20.6 4.9 28 123-153 6-33 (154)
127 1gmx_A GLPE protein; transfera 24.8 52 0.0018 21.8 2.8 32 122-156 56-87 (108)
128 2p6p_A Glycosyl transferase; X 24.8 1E+02 0.0034 24.9 5.1 36 53-90 99-134 (384)
129 3rqi_A Response regulator prot 24.7 1E+02 0.0035 22.0 4.7 28 123-153 6-33 (184)
130 2yjn_A ERYCIII, glycosyltransf 24.7 70 0.0024 26.7 4.1 32 57-90 140-171 (441)
131 1nh8_A ATP phosphoribosyltrans 24.6 25 0.00086 29.1 1.3 18 131-155 173-190 (304)
132 2ae6_A Acetyltransferase, GNAT 24.3 1.4E+02 0.0048 20.6 5.3 40 140-185 103-142 (166)
133 3cg4_A Response regulator rece 24.0 1.3E+02 0.0044 19.9 4.8 14 123-136 6-19 (142)
134 3eme_A Rhodanese-like domain p 24.0 1.1E+02 0.0037 19.9 4.3 29 121-152 53-81 (103)
135 1wi4_A Synip, syntaxin binding 23.9 64 0.0022 21.7 3.1 38 121-158 60-100 (109)
136 1jbe_A Chemotaxis protein CHEY 23.8 98 0.0033 20.1 4.1 12 125-136 5-16 (128)
137 1srr_A SPO0F, sporulation resp 23.6 1.3E+02 0.0044 19.4 4.7 11 125-135 4-14 (124)
138 3dzc_A UDP-N-acetylglucosamine 23.3 1.2E+02 0.004 25.2 5.3 43 48-90 98-141 (396)
139 1z4e_A Transcriptional regulat 23.2 1.5E+02 0.0051 19.8 5.1 40 140-185 107-146 (153)
140 1i16_A Interleukin 16, LCF; cy 23.2 74 0.0025 22.1 3.5 39 120-158 75-113 (130)
141 2bei_A Diamine acetyltransfera 23.2 1.6E+02 0.0053 20.5 5.4 38 140-183 110-147 (170)
142 3lua_A Response regulator rece 23.1 1.4E+02 0.0047 19.8 4.9 30 123-155 3-33 (140)
143 1u6m_A Acetyltransferase, GNAT 23.0 1.8E+02 0.0062 20.7 5.8 41 140-186 134-174 (199)
144 3pwz_A Shikimate dehydrogenase 23.0 1.3E+02 0.0044 24.0 5.3 31 122-156 118-148 (272)
145 2j8m_A Acetyltransferase PA486 23.0 1.7E+02 0.0059 20.1 5.6 42 139-186 103-144 (172)
146 3a10_A Response regulator; pho 22.9 1.3E+02 0.0044 19.1 4.5 14 126-139 3-16 (116)
147 3tnl_A Shikimate dehydrogenase 22.9 1.4E+02 0.0047 24.5 5.5 36 122-164 152-187 (315)
148 1yr0_A AGR_C_1654P, phosphinot 22.8 1.8E+02 0.006 20.1 5.6 40 140-185 105-144 (175)
149 3n0r_A Response regulator; sig 22.7 1.2E+02 0.004 24.1 5.0 30 123-155 159-188 (286)
150 3vot_A L-amino acid ligase, BL 22.6 1.4E+02 0.0047 24.9 5.6 45 40-87 57-101 (425)
151 2jlm_A Putative phosphinothric 22.3 1.8E+02 0.006 20.5 5.6 41 140-186 112-152 (182)
152 3fbt_A Chorismate mutase and s 22.3 99 0.0034 24.9 4.4 32 122-157 120-151 (282)
153 3re1_A Uroporphyrinogen-III sy 22.1 2.5E+02 0.0086 21.8 6.8 63 122-188 139-201 (269)
154 3jte_A Response regulator rece 22.0 1.3E+02 0.0044 20.0 4.5 9 125-133 4-12 (143)
155 3ot5_A UDP-N-acetylglucosamine 22.0 1.2E+02 0.0041 25.3 5.1 43 48-90 101-144 (403)
156 3f6c_A Positive transcription 21.9 1.1E+02 0.0039 20.0 4.2 26 126-154 3-28 (134)
157 3jyo_A Quinate/shikimate dehyd 21.9 1.4E+02 0.0048 23.9 5.3 31 122-156 125-155 (283)
158 1o97_C Electron transferring f 21.6 92 0.0031 24.9 4.1 46 41-89 95-144 (264)
159 1vhs_A Similar to phosphinothr 21.3 2E+02 0.0068 20.0 5.6 42 139-186 102-143 (175)
160 3kht_A Response regulator; PSI 21.2 1.5E+02 0.0051 19.8 4.7 28 123-153 4-31 (144)
161 1s3z_A Aminoglycoside 6'-N-ace 21.2 1.8E+02 0.006 19.6 5.2 41 139-185 116-156 (165)
162 3kcn_A Adenylate cyclase homol 21.0 1.4E+02 0.0047 20.3 4.5 10 124-133 4-13 (151)
163 3lod_A Putative acyl-COA N-acy 21.0 1.9E+02 0.0066 19.2 5.6 42 139-186 95-136 (162)
164 3ih5_A Electron transfer flavo 20.9 60 0.0021 25.1 2.7 44 42-88 75-119 (217)
165 1efv_B Electron transfer flavo 20.9 97 0.0033 24.6 4.1 46 41-89 99-148 (255)
166 2qxy_A Response regulator; reg 20.8 1.6E+02 0.0056 19.4 4.9 27 124-153 4-30 (142)
167 3o8q_A Shikimate 5-dehydrogena 20.7 1.5E+02 0.0053 23.6 5.3 31 122-156 124-154 (281)
168 2gkg_A Response regulator homo 20.4 1.3E+02 0.0046 19.1 4.2 26 125-153 6-31 (127)
169 3g5j_A Putative ATP/GTP bindin 20.4 1.1E+02 0.0037 20.6 3.9 28 123-152 87-115 (134)
170 4e0a_A BH1408 protein; structu 20.3 2E+02 0.0067 19.0 6.2 44 138-187 108-151 (164)
171 2pdo_A Acetyltransferase YPEA; 20.2 2E+02 0.0068 19.1 5.4 41 139-185 90-130 (144)
172 3cnb_A DNA-binding response re 20.0 1.7E+02 0.0057 19.2 4.8 28 123-153 7-35 (143)
No 1
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=100.00 E-value=3.7e-32 Score=216.34 Aligned_cols=179 Identities=44% Similarity=0.763 Sum_probs=154.3
Q ss_pred CCCChHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCC
Q 029314 7 KAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAK 86 (195)
Q Consensus 7 ~~~~~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p 86 (195)
+.....++.|++.+|.+|+||.+|+.|+|+.+++.+++.++.+++.|++.+.+.++|+|+|++.|||++|..+|+.+++|
T Consensus 9 ~~~~~~~~~l~~~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p 88 (190)
T 2dy0_A 9 TATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVG 88 (190)
T ss_dssp CCCHHHHHHHHHHSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCE
T ss_pred cccHHHHHHHHHHHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCC
Confidence 33444577899999999999999999999999999999999999999999876678999999999999999999999999
Q ss_pred EEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCcc
Q 029314 87 FVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC 166 (195)
Q Consensus 87 ~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~ 166 (195)
+..+||+.+.++...+..++.+++.+.+++..+...+|++|||||||+|||+|+.+++++|+++|++.+.+++++++.+.
T Consensus 89 ~~~~rk~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~ 168 (190)
T 2dy0_A 89 FVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDL 168 (190)
T ss_dssp EEEEBSTTCCCSCEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGG
T ss_pred EEEEEecCCCCcccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCc
Confidence 98888887777776666676666666777664445699999999999999999999999999999999999999988743
Q ss_pred CchhHHHHhhhhcCceeeEEeec
Q 029314 167 FSSYILLFSYATNGFTQFTITSE 189 (195)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~ 189 (195)
.+++.+++.|++.+++-.+
T Consensus 169 ----~~~~~l~~~g~~v~sl~~~ 187 (190)
T 2dy0_A 169 ----GGEQRLEKQGITSYSLVPF 187 (190)
T ss_dssp ----CHHHHHHTTTCEEEEEEEE
T ss_pred ----chHHHHhhCCCcEEEEEEe
Confidence 3566678888887777543
No 2
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.97 E-value=9.6e-31 Score=207.68 Aligned_cols=156 Identities=36% Similarity=0.686 Sum_probs=138.5
Q ss_pred hHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC----CCccEEEEeCCcchHhHHHHHHHhCCC
Q 029314 11 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIGAK 86 (195)
Q Consensus 11 ~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~----~~~D~Iv~v~~~G~~lA~~la~~l~~p 86 (195)
...+.|++.+|.+|+||.+|+.|+|+..++.+++.++.+++.|++++.+ .++|+|+|++.||+++|..+|+.+++|
T Consensus 5 ~~~~~l~~~~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p 84 (187)
T 1g2q_A 5 SYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVG 84 (187)
T ss_dssp HHHHHHHHHCEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHhcccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCCC
Confidence 3567899999999999999999999999999999999999999998864 468999999999999999999999999
Q ss_pred EEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCcc
Q 029314 87 FVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC 166 (195)
Q Consensus 87 ~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~ 166 (195)
+..+||..+.++...+.+++.+++.+.+++..+...+|++|||||||+|||+|+.++++.|+++|++.++++++++++..
T Consensus 85 ~~~~rk~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~ 164 (187)
T 1g2q_A 85 FVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFL 164 (187)
T ss_dssp EEEEEETTCSCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCS
T ss_pred EEEEEEeCCCCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccCc
Confidence 98888876666666666676667777777765545699999999999999999999999999999999999999999853
No 3
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.97 E-value=1.3e-30 Score=205.46 Aligned_cols=170 Identities=38% Similarity=0.691 Sum_probs=143.6
Q ss_pred hHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCC---CccEEEEeCCcchHhHHHHHHHhCCCE
Q 029314 11 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDK---NISVVAGIEARGFIFGPPIALAIGAKF 87 (195)
Q Consensus 11 ~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~~---~~D~Iv~v~~~G~~lA~~la~~l~~p~ 87 (195)
+.++.|...||.+|+||.+|+.|+|+..++.+|+.++.+++.|++.+.+. ++|+|++++.||+++|..+|+.+++|+
T Consensus 4 ~~~~~l~~~i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p~ 83 (180)
T 1zn8_A 4 SELQLVEQRIRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGC 83 (180)
T ss_dssp HHHHHHHTTCEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCCE
Confidence 56778999999999999999999999999999999999999999887542 379999999999999999999999999
Q ss_pred EEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccC
Q 029314 88 VPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACF 167 (195)
Q Consensus 88 ~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~ 167 (195)
...|++.+.++...+..++.+++.+.+++..+...+|++||||||++|||+|+.++++.|+++|++.+.+++++++...
T Consensus 84 ~~~r~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~- 162 (180)
T 1zn8_A 84 VLIRKRGKLPGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSL- 162 (180)
T ss_dssp EEEEETTCCCSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGG-
T ss_pred EEEEecCCCCcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCc-
Confidence 8888877666666666677666666777765544699999999999999999999999999999999999999988642
Q ss_pred chhHHHHhhhhcCceeeEE
Q 029314 168 SSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ 186 (195)
.+...++ +++..+|
T Consensus 163 ---~~~~~l~--~~~~~sl 176 (180)
T 1zn8_A 163 ---KGREKLA--PVPFFSL 176 (180)
T ss_dssp ---CHHHHHT--TSCEEEE
T ss_pred ---chhhhhc--CCceEEE
Confidence 2333443 5555554
No 4
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.97 E-value=1.6e-30 Score=213.75 Aligned_cols=177 Identities=26% Similarity=0.472 Sum_probs=148.7
Q ss_pred CCCChHHHHHhhccccc-CCCCCCCc-eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEEeCCcchHhHHHHHHH
Q 029314 7 KAQDPRIAGISSAIRVI-PDFPKPGI-MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALA 82 (195)
Q Consensus 7 ~~~~~~~~~l~~~~r~~-~~~p~~g~-~~~d~~~i~~~p~~~~~l~~~la~~~~~~--~~D~Iv~v~~~G~~lA~~la~~ 82 (195)
+..++..++|++.||++ |+||.+|+ .|+|++.++.+|+.++.+++.|++.+.+. ++|+|+|++.||+++|..+|+.
T Consensus 13 ~~~~~~~~~l~~~i~~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~ 92 (236)
T 1qb7_A 13 DDSHALSQLLKKSYRWYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVE 92 (236)
T ss_dssp CTTSHHHHHHHHHCCEECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHH
T ss_pred CcChHHHHHHHHHhcccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHH
Confidence 35677899999999999 99999999 99999999999999999999999988754 7899999999999999999999
Q ss_pred hCCCEEEEecCCCCCCcee-eeeeeecc---cceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEE
Q 029314 83 IGAKFVPMRKPKKLPGEVI-SEEYSLEY---GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILI 158 (195)
Q Consensus 83 l~~p~~~~rk~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~ 158 (195)
+++|+++.||.++.++... +.+|+.++ +.+.+++..+...+|++||||||++|||+|+.+++++|+++|+++++++
T Consensus 93 L~~p~~~~rk~~k~~~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~ 172 (236)
T 1qb7_A 93 LEIPFVLMRKADKNAGLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMV 172 (236)
T ss_dssp HTCCEEEEBCGGGCCSSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEE
T ss_pred hCCCEEEEEEecCCCCcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEE
Confidence 9999998888777666655 44555555 4456776655556999999999999999999999999999999999999
Q ss_pred EEEecCccCchhHHHHhhhhc------CceeeEEe
Q 029314 159 CIQMLNACFSSYILLFSYATN------GFTQFTIT 187 (195)
Q Consensus 159 ~lv~~~~~~~~~~~~~~~~~~------~~~~~~~~ 187 (195)
+++++... .++..+++. |++..+|.
T Consensus 173 ~l~~~~~~----~g~~~l~~~~~~~~~g~~v~sl~ 203 (236)
T 1qb7_A 173 SILSIPFL----KAAEKIHSTANSRYKDIKFISLL 203 (236)
T ss_dssp EEEECGGG----CHHHHHHHHHHHTTTTCCEEEEE
T ss_pred EEEEcccc----cHHHHHhhhcccccCCCcEEEEE
Confidence 99998753 244555543 66555554
No 5
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.97 E-value=2.8e-30 Score=204.90 Aligned_cols=169 Identities=33% Similarity=0.491 Sum_probs=142.3
Q ss_pred hHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 11 PRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 11 ~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
+..+.|+..+|.+|+||.+|+.|.|+..++.+++.++.+++.|++.+.+.++|+|+|++.|||++|..+|+.+++|+...
T Consensus 3 ~~~~~l~~~~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~ 82 (186)
T 1l1q_A 3 MSVADAHALIKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVAL 82 (186)
T ss_dssp CCHHHHHHTCEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEE
T ss_pred hhHHHHHhhhccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEEE
Confidence 45678999999999999999999999999999999999999999988766789999999999999999999999999888
Q ss_pred ecCCCCCCceeeeeeeecccce-eEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCc--EEEEEEEEecCccC
Q 029314 91 RKPKKLPGEVISEEYSLEYGKD-VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNH--IFILICIQMLNACF 167 (195)
Q Consensus 91 rk~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~--~V~~~~lv~~~~~~ 167 (195)
||+.+.++...+.+++.+++.. .+++..+...+|++|||||||+|||+|+.++++.|+++|++ ++.++++++++..
T Consensus 83 rk~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~- 161 (186)
T 1l1q_A 83 RKAGKLPGDVCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEAL- 161 (186)
T ss_dssp EETTSSCSSEEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGG-
T ss_pred EecCCCCCceechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCc-
Confidence 8877766666555555444433 56665444469999999999999999999999999999999 9999999998742
Q ss_pred chhHHHHhhhhcCcee
Q 029314 168 SSYILLFSYATNGFTQ 183 (195)
Q Consensus 168 ~~~~~~~~~~~~~~~~ 183 (195)
.+++.+++.++..
T Consensus 162 ---~g~~~l~~~~~~~ 174 (186)
T 1l1q_A 162 ---KGREKVGQKCTRL 174 (186)
T ss_dssp ---CHHHHHTTTCCCE
T ss_pred ---cHHHHHhhcCcce
Confidence 3555666555433
No 6
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.92 E-value=3.6e-25 Score=173.33 Aligned_cols=150 Identities=17% Similarity=0.203 Sum_probs=120.3
Q ss_pred HHhhcccccCCCCCC-CceEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEecC
Q 029314 15 GISSAIRVIPDFPKP-GIMFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKP 93 (195)
Q Consensus 15 ~l~~~~r~~~~~p~~-g~~~~d~~~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~ 93 (195)
.|++.+|.+|+||.+ | .|++...+..+++..+.+++.|++.+.+ ++|+|++++.||+++|..+|+.+++|+...+++
T Consensus 7 ~~~~~~~~~~~~~~~~g-~~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~ 84 (175)
T 1vch_A 7 TVGGVTRHVPLIEPLPG-RRIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRR 84 (175)
T ss_dssp EETTEEEEECEEEEETT-EEEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSS
T ss_pred EecceeeEcCceEcCCC-cEEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEec
Confidence 578899999999987 6 4799999999999999999999998875 789999999999999999999999999888776
Q ss_pred CCC--CCceeeeeeeec-ccceeEEEeeccc--CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCcc
Q 029314 94 KKL--PGEVISEEYSLE-YGKDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC 166 (195)
Q Consensus 94 ~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~--~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~ 166 (195)
.+. +.......+..+ +..+.+.+..+.. ++|++|||||||+|||+|+.++++.|+++|++.+.++++++++..
T Consensus 85 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~ 162 (175)
T 1vch_A 85 RRPYMEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP 162 (175)
T ss_dssp CCTTCCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC
T ss_pred CCCCCCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC
Confidence 542 222111111111 1223455543322 489999999999999999999999999999999999999988753
No 7
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.92 E-value=2.7e-23 Score=165.71 Aligned_cols=170 Identities=16% Similarity=0.185 Sum_probs=123.2
Q ss_pred HHHHhhcccccCCCCCCCceEEe-chhhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEe
Q 029314 13 IAGISSAIRVIPDFPKPGIMFQD-ITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (195)
Q Consensus 13 ~~~l~~~~r~~~~~p~~g~~~~d-~~~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~r 91 (195)
++.|...++..+-+...++.|.| +.+...+|..++.+++.|++.+.+.++|+|+|++.|||++|..+|+.+++|+...|
T Consensus 4 ~~~l~~~l~~~~~~~~g~~l~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~r 83 (197)
T 1y0b_A 4 MEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFAR 83 (197)
T ss_dssp HHHHHHHHHHHCEEETTTEEECTTTTSSEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEEB
T ss_pred HHHHHHHHhhCCEecCCCEEEehhhhcccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEEE
Confidence 44555555544443333433322 22344799999999999999987667899999999999999999999999998888
Q ss_pred cCCCCC--Cceeee-eeeeccc-ceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccC
Q 029314 92 KPKKLP--GEVISE-EYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACF 167 (195)
Q Consensus 92 k~~~~~--~~~~~~-~~~~~~~-~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~ 167 (195)
++.+.+ +..... .++...+ ...+++..+...+|++|||||||+|||+|+.+++++|+++|++.+.++++++++..
T Consensus 84 k~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~- 162 (197)
T 1y0b_A 84 KHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQ- 162 (197)
T ss_dssp SSCCSSCCSSEEEEEEEETTTTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTS-
T ss_pred ecCCCCCCCceEEEeeeccccCceEEEEEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEeccc-
Confidence 776544 333321 2221222 23355554444699999999999999999999999999999999999999998743
Q ss_pred chhHHHHhhhhcCceeeEE
Q 029314 168 SSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ 186 (195)
.+.+.++..|++..+|
T Consensus 163 ---~~~~~l~~~~~~~~sl 178 (197)
T 1y0b_A 163 ---PGRDELVKLGYRVESL 178 (197)
T ss_dssp ---THHHHHHHTTCCEEEE
T ss_pred ---chhhhHHhcCCcEEEE
Confidence 3556677666544443
No 8
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.91 E-value=1.9e-23 Score=171.25 Aligned_cols=143 Identities=16% Similarity=0.263 Sum_probs=113.8
Q ss_pred CCCc---eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceee
Q 029314 28 KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 102 (195)
Q Consensus 28 ~~g~---~~~d~~~i~~~p~~~~~l~~~la~~~~~~--~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~ 102 (195)
.+|. .|+|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|+.+++|+.++||+.+..+.
T Consensus 50 ~SG~~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~--- 126 (234)
T 3m3h_A 50 SSGMKSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGK--- 126 (234)
T ss_dssp TTSCEESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC-----------
T ss_pred CcCCcCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCc---
Confidence 5566 68999999999999999999999988753 789999999999999999999999999999886652221
Q ss_pred eeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCce
Q 029314 103 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFT 182 (195)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~ 182 (195)
.. .+ .+...+|++||||||++|||+|+.+++++|+++|++++++++++++.. ..+...+++.|++
T Consensus 127 ---------~~-~i-~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~----~~~~e~l~~~gi~ 191 (234)
T 3m3h_A 127 ---------GN-QI-EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYEL----EAGKEKLEAANVA 191 (234)
T ss_dssp ----------C-CE-ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCC----HHHHHHHHHTTCC
T ss_pred ---------ce-EE-ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcC----chHHHHHHhcCCC
Confidence 11 01 134569999999999999999999999999999999999999998753 2467778888988
Q ss_pred eeEEee
Q 029314 183 QFTITS 188 (195)
Q Consensus 183 ~~~~~~ 188 (195)
.++|..
T Consensus 192 v~sL~~ 197 (234)
T 3m3h_A 192 SYSLSD 197 (234)
T ss_dssp EEESSC
T ss_pred EEEEee
Confidence 887754
No 9
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.91 E-value=3.9e-23 Score=174.48 Aligned_cols=152 Identities=20% Similarity=0.323 Sum_probs=118.2
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCC-CCceeeeeeeec--
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKL-PGEVISEEYSLE-- 108 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~-~~~~~~~~~~~~-- 108 (195)
.|+++..++.+|..++.+++.+++.+.+.++|+|+|++.||+++|..+|+.+++|++++||+.+. ++...+..+...
T Consensus 101 ~f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~rk~~~~t~~~~~~~~~~~g~~ 180 (291)
T 1o57_A 101 GYVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSS 180 (291)
T ss_dssp TEECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEBCC-----CCEEEEEEECSSC
T ss_pred CeEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEEEeccCCCCceeeeeeecccc
Confidence 47889999999999999999999999876789999999999999999999999999988876653 344444444221
Q ss_pred ccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEee
Q 029314 109 YGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTITS 188 (195)
Q Consensus 109 ~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (195)
+....+.+....+.+|++|||||||+|||+|+.+++++|+++||+++++++++++++.... +...-++.+++..
T Consensus 181 ~~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~~~~------l~~~~~SL~~~~~ 254 (291)
T 1o57_A 181 NRIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDER------LVDEYMSLLTLST 254 (291)
T ss_dssp CSEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCTTS------CCSCCEEEEEEEC
T ss_pred cceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCccccc------cCCceEEEEEEcc
Confidence 1223456654455699999999999999999999999999999999999999999864211 1123455556655
Q ss_pred c
Q 029314 189 E 189 (195)
Q Consensus 189 ~ 189 (195)
+
T Consensus 255 ~ 255 (291)
T 1o57_A 255 I 255 (291)
T ss_dssp C
T ss_pred c
Confidence 4
No 10
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.91 E-value=2.4e-23 Score=171.45 Aligned_cols=144 Identities=21% Similarity=0.296 Sum_probs=118.4
Q ss_pred CCCc---eEEechhhhcCHHHHHHHHHHHHHHhcCC--CccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceee
Q 029314 28 KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDK--NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVIS 102 (195)
Q Consensus 28 ~~g~---~~~d~~~i~~~p~~~~~l~~~la~~~~~~--~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~ 102 (195)
.+|. .|+|+..++.+|+.++.+++.|++.+.+. ++|+|+|++.+|+++|..+|+.+++|++++||+.+..+..
T Consensus 62 ~SG~~Sp~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~-- 139 (243)
T 3dez_A 62 ASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAG-- 139 (243)
T ss_dssp ---CEESEEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC-------
T ss_pred CCCCCCCEEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCce--
Confidence 4555 58999999999999999999999988753 7899999999999999999999999999999876532211
Q ss_pred eeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCce
Q 029314 103 EEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFT 182 (195)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~ 182 (195)
..+ .+...+|++||||||++|||+|+.+++++|+++|++++++++++++.. ..+.+.+++.|++
T Consensus 140 ---------~~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~----~~a~e~l~~~gi~ 203 (243)
T 3dez_A 140 ---------NQI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYEL----PKATANFEKASVK 203 (243)
T ss_dssp ---------CCE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCC----HHHHHHHHHHTCC
T ss_pred ---------eEE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCC----chHHHHHHhcCCC
Confidence 011 134569999999999999999999999999999999999999998764 3567778888888
Q ss_pred eeEEeec
Q 029314 183 QFTITSE 189 (195)
Q Consensus 183 ~~~~~~~ 189 (195)
.++|+..
T Consensus 204 ~~sL~~~ 210 (243)
T 3dez_A 204 LVTLSNY 210 (243)
T ss_dssp EEESSCH
T ss_pred EEEEeeH
Confidence 8877653
No 11
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.90 E-value=8.7e-23 Score=160.72 Aligned_cols=137 Identities=21% Similarity=0.278 Sum_probs=113.0
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHh-cCC-CccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecc
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERY-KDK-NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~-~~~-~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~ 109 (195)
.|+|++.++.+|+..+.+++.+++.+ .+. ++|+|+|++.||+++|..+|+.+++|+.+.|++.+. +
T Consensus 27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~------------~ 94 (178)
T 2yzk_A 27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKG------------H 94 (178)
T ss_dssp EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTT------------S
T ss_pred eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccc------------c
Confidence 48999999999999999999999888 543 579999999999999999999999999887775431 1
Q ss_pred cceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEee
Q 029314 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTITS 188 (195)
Q Consensus 110 ~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (195)
+.... +. +.+ +|++|||||||+|||+|+.++++.|+++|++++.++++++++. .+...+++.|++.+++..
T Consensus 95 g~~~~-i~-~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~-----~~~~~l~~~g~~~~sl~~ 165 (178)
T 2yzk_A 95 GTLSQ-VE-GDP-PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGE-----GAGELLARMGVRLVSVAT 165 (178)
T ss_dssp CCCCC-CB-TCC-CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCS-----SHHHHHHTTTCEEEEEEE
T ss_pred Cccce-ec-ccC-CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-----CHHHHHHHcCCcEEEEee
Confidence 11110 11 334 9999999999999999999999999999999999999999874 255667778888777654
No 12
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.90 E-value=1e-22 Score=163.77 Aligned_cols=138 Identities=15% Similarity=0.274 Sum_probs=114.5
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecc
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~~~--~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~ 109 (195)
.|+|++.++.+|+.++.+++.|++.+.+ .++|+|+|++.+|+++|..+|..+++|+.+.||..+. +
T Consensus 31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~------------~ 98 (205)
T 2wns_A 31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKD------------Y 98 (205)
T ss_dssp EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTT------------S
T ss_pred EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCc------------c
Confidence 5889999999999999999999998764 4789999999999999999999999999887765431 1
Q ss_pred cceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEee
Q 029314 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTITS 188 (195)
Q Consensus 110 ~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (195)
+.... + .+...+|++||||||++|||+|+.++++.|+++|++++++++++++.. .+...++..|++.++|..
T Consensus 99 g~~~~-~-~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~-----~~~~~l~~~g~~v~sl~~ 170 (205)
T 2wns_A 99 GTKRL-V-EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQ-----GGKDKLQAHGIRLHSVCT 170 (205)
T ss_dssp SSCCS-E-ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCS-----SHHHHHHTTTCEEEEEEE
T ss_pred Ccccc-c-cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCc-----chHHHHHHcCCeEEEEEE
Confidence 11110 1 134458999999999999999999999999999999999999999852 355667888888887765
No 13
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.90 E-value=8.1e-23 Score=161.22 Aligned_cols=138 Identities=20% Similarity=0.197 Sum_probs=111.5
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCE--EEEecCCCCCCceeeeeeeecc
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKLPGEVISEEYSLEY 109 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~--~~~rk~~~~~~~~~~~~~~~~~ 109 (195)
.|+|+..++.+|+..+.+++.|++.+.+.++|+|+|++.+|+++|..+|+.+++|+ .+.|++.+. +
T Consensus 34 ~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~------------~ 101 (180)
T 2p1z_A 34 YYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKK------------H 101 (180)
T ss_dssp -CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-------------C
T ss_pred EEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEecccc------------c
Confidence 58999999999999999999999998766889999999999999999999998765 555654321 1
Q ss_pred cceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEee
Q 029314 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTITS 188 (195)
Q Consensus 110 ~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (195)
+... .+. +...+|++|||||||+|||+|+.++++.|+++|+++++++++++++. .+++.+++.|++.+++..
T Consensus 102 g~~~-~~~-g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~-----~g~~~l~~~g~~~~sl~~ 173 (180)
T 2p1z_A 102 GMQR-RIE-GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRAT-----GAADVIAAEGLEYRYILG 173 (180)
T ss_dssp C-CC-SEE-SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CC-----CHHHHHHTTTCCEEEEEC
T ss_pred cchh-hcc-CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCc-----chHHHHHhcCCeEEEEEE
Confidence 1111 011 33469999999999999999999999999999999999999999873 356677778888777654
No 14
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.89 E-value=3.4e-22 Score=177.72 Aligned_cols=150 Identities=19% Similarity=0.278 Sum_probs=124.7
Q ss_pred cccCCCC-CCCc---eEEechhhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCC
Q 029314 21 RVIPDFP-KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKL 96 (195)
Q Consensus 21 r~~~~~p-~~g~---~~~d~~~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~ 96 (195)
..++.|+ .+|. .|+|++.++.+|+.++.+++.|++.+.+.++|+|+|++.+|+++|..+|+.+++|+++.||+.+
T Consensus 272 ~~~g~F~L~SG~~S~~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~rk~~k- 350 (453)
T 3qw4_B 272 VRFGNFTLKSGKSSPIYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAK- 350 (453)
T ss_dssp EEESCCBCTTSSBCSEEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEESSCC--
T ss_pred CEECCEeccCCCcCCEEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEEEeecc-
Confidence 4477888 6777 5999999999999999999999999987789999999999999999999999999999988664
Q ss_pred CCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhh
Q 029314 97 PGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSY 176 (195)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~ 176 (195)
+++.... + .+.+.+|++||||||++|||+|+.+++++|+++|++++++++++++.. .++..+
T Consensus 351 -----------~~g~~~~-i-~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~-----~g~~~l 412 (453)
T 3qw4_B 351 -----------IYGTKAA-I-EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDM-----GAKAFL 412 (453)
T ss_dssp -----------------C-E-ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSS-----SHHHHH
T ss_pred -----------ccCcCce-E-ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCc-----chHHHH
Confidence 1222211 1 134569999999999999999999999999999999999999999863 466778
Q ss_pred hhcCceeeEEeec
Q 029314 177 ATNGFTQFTITSE 189 (195)
Q Consensus 177 ~~~~~~~~~~~~~ 189 (195)
++.|++..+|...
T Consensus 413 ~~~g~~v~sL~~~ 425 (453)
T 3qw4_B 413 NKLGYDFEAVVGL 425 (453)
T ss_dssp HHTTCCEEEEEEH
T ss_pred HhcCCCEEEEeEH
Confidence 8889888887653
No 15
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.89 E-value=3.6e-22 Score=163.44 Aligned_cols=147 Identities=14% Similarity=0.141 Sum_probs=115.0
Q ss_pred CCCc---eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEEeCCcchHhHHHHHHHh------CCCEEEEecCCCC
Q 029314 28 KPGI---MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKL 96 (195)
Q Consensus 28 ~~g~---~~~d~~~i~~~p~~~~~l~~~la~~~~~--~~~D~Iv~v~~~G~~lA~~la~~l------~~p~~~~rk~~~~ 96 (195)
.+|. .|+|+. ++.+|+.++.+++.+++.+.+ .++|+|++++.+|+++|..+|..+ ++|+.+.||+.+.
T Consensus 44 ~SG~~Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~ 122 (232)
T 3mjd_A 44 KSGRISPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKD 122 (232)
T ss_dssp TTSCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC---
T ss_pred cCCCccceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeeccc
Confidence 4455 588985 578999999999999998864 369999999999999999999997 8999999886542
Q ss_pred CCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCc---hhHHH
Q 029314 97 PGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFS---SYILL 173 (195)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~---~~~~~ 173 (195)
. +.... +. +..++|++|||||||+|||+|+.+++++|+++|++++++++++++..... .....
T Consensus 123 ~------------g~~~~-i~-g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~ 188 (232)
T 3mjd_A 123 H------------GEGGV-FV-GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATK 188 (232)
T ss_dssp ----------------CC-EE-ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHH
T ss_pred C------------CCCce-Ee-ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHH
Confidence 1 11110 11 23459999999999999999999999999999999999999999874211 11223
Q ss_pred HhhhhcCceeeEEeec
Q 029314 174 FSYATNGFTQFTITSE 189 (195)
Q Consensus 174 ~~~~~~~~~~~~~~~~ 189 (195)
..+++.|++.++|..+
T Consensus 189 ~~~~~~gv~v~sL~~~ 204 (232)
T 3mjd_A 189 KISQDFNIPVLAVTNF 204 (232)
T ss_dssp HHHHHHCCCEEEEEEH
T ss_pred HHHHHcCCcEEEEEeH
Confidence 6678889998888764
No 16
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.89 E-value=6.1e-22 Score=159.73 Aligned_cols=140 Identities=23% Similarity=0.304 Sum_probs=115.3
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecc
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEY 109 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~~~--~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~ 109 (195)
.|+|+..++.+|+.++.+++.|++.+.+ .++|+|+|++.||+++|..+|+.+++|+.++||.++.++..
T Consensus 37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~--------- 107 (211)
T 2aee_A 37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAG--------- 107 (211)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----C---------
T ss_pred eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCc---------
Confidence 4899999999999999999999987753 36799999999999999999999999998888765421110
Q ss_pred cceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEeec
Q 029314 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTITSE 189 (195)
Q Consensus 110 ~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (195)
..+. +...+|++||||||++|||+|+.++++.|+++|++.+++++++++.. ..+.+.+++.|++.+.++..
T Consensus 108 --~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~----~~~~~~l~~~~~~~~~l~~~ 178 (211)
T 2aee_A 108 --NQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYEL----PKASQNFKEAGIKLITLSNY 178 (211)
T ss_dssp --CSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCC----HHHHHHHHHHTCCEEESCCH
T ss_pred --ceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEeccc----ccHHHHHHhCCCCEEEEeeH
Confidence 1121 33469999999999999999999999999999999999999998862 34667777788888887654
No 17
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.87 E-value=1.7e-21 Score=158.74 Aligned_cols=143 Identities=16% Similarity=0.241 Sum_probs=113.9
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEEeCCcchHhHHHHHHHh---------CCCEEEEecCCCCCCce
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI---------GAKFVPMRKPKKLPGEV 100 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~~~--~~~D~Iv~v~~~G~~lA~~la~~l---------~~p~~~~rk~~~~~~~~ 100 (195)
.|+| ..++.+|+.++.+++.|++.+.+ .++|+|++++.+|+++|..+|+.+ ++|+.+.||.++
T Consensus 37 ~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k----- 110 (226)
T 2ps1_A 37 YFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAK----- 110 (226)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEE-----
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhh-----
Confidence 5788 56889999999999999998864 368999999999999999999999 999988877543
Q ss_pred eeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCch------hHHHH
Q 029314 101 ISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSS------YILLF 174 (195)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~------~~~~~ 174 (195)
.++.+.+.. +..++|++|||||||+|||+|+.+++++|+++|++++++++++++.+.... ....+
T Consensus 111 -------~~g~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~~~ 181 (226)
T 2ps1_A 111 -------DHGEGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSATQT 181 (226)
T ss_dssp -------SSTTCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHHHH
T ss_pred -------hcCCCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCcccccccccchHHHH
Confidence 123333322 223599999999999999999999999999999999999999999864221 12345
Q ss_pred hhhhcCceeeEEeec
Q 029314 175 SYATNGFTQFTITSE 189 (195)
Q Consensus 175 ~~~~~~~~~~~~~~~ 189 (195)
.++..|++.++|...
T Consensus 182 ~~~~~g~~v~sl~~~ 196 (226)
T 2ps1_A 182 VSKKYGIPVLSIVSL 196 (226)
T ss_dssp HHHHHTCCEEEEEEH
T ss_pred HHHhcCCeEEEEecH
Confidence 556678888777654
No 18
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.87 E-value=2.7e-21 Score=158.62 Aligned_cols=142 Identities=17% Similarity=0.226 Sum_probs=111.3
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEEeCCcchHhHHHHHHHh------CCCEEEEecCCCCCCceeee
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 103 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~~~--~~~D~Iv~v~~~G~~lA~~la~~l------~~p~~~~rk~~~~~~~~~~~ 103 (195)
.|+|+ .++.+|+.++.+++.+++.+.+ .++|+|++++.+|+++|..+|..+ ++|+++.||+.+..+..
T Consensus 58 ~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~~--- 133 (238)
T 3n2l_A 58 YFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGEG--- 133 (238)
T ss_dssp EEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC----------
T ss_pred EEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCCC---
Confidence 68897 5678999999999999998864 479999999999999999999997 89999998876532210
Q ss_pred eeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccC-chhHHHHhh-hhcCc
Q 029314 104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACF-SSYILLFSY-ATNGF 181 (195)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~-~~~~~~~~~-~~~~~ 181 (195)
..++ +..++| +||||||++|||+|+.+++++|+++|++++++++++++..-. ....+.+-+ ++.|+
T Consensus 134 --------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~~~Gv 201 (238)
T 3n2l_A 134 --------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVERDFGC 201 (238)
T ss_dssp ---------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHHHHCC
T ss_pred --------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHHHcCC
Confidence 1121 334589 999999999999999999999999999999999999987421 112333333 78899
Q ss_pred eeeEEeec
Q 029314 182 TQFTITSE 189 (195)
Q Consensus 182 ~~~~~~~~ 189 (195)
+..+|..+
T Consensus 202 ~v~SL~~~ 209 (238)
T 3n2l_A 202 AVISIVSL 209 (238)
T ss_dssp EEEEEEEH
T ss_pred CEEEEEEH
Confidence 98888764
No 19
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.86 E-value=3.9e-21 Score=155.41 Aligned_cols=142 Identities=15% Similarity=0.206 Sum_probs=111.6
Q ss_pred eEEechhhhcCHHHHHHHHHHHHHHhcC--CCccEEEEeCCcchHhHHHHHHHh------CCCEEEEecCCCCCCceeee
Q 029314 32 MFQDITTLLLDTKAFRDTIDLFVERYKD--KNISVVAGIEARGFIFGPPIALAI------GAKFVPMRKPKKLPGEVISE 103 (195)
Q Consensus 32 ~~~d~~~i~~~p~~~~~l~~~la~~~~~--~~~D~Iv~v~~~G~~lA~~la~~l------~~p~~~~rk~~~~~~~~~~~ 103 (195)
.|+| ..++.+|+.++.+++.|++.+.+ .++|+|+|++.+|+++|..+|+.+ ++|+.+.||+.+..+..
T Consensus 33 ~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~~--- 108 (213)
T 1lh0_A 33 YFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEG--- 108 (213)
T ss_dssp EEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTTC---
T ss_pred EEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCCC---
Confidence 5889 57889999999999999998864 368999999999999999999999 89999888765422110
Q ss_pred eeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccC-ch-hHHHHhhhhcCc
Q 029314 104 EYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACF-SS-YILLFSYATNGF 181 (195)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~-~~-~~~~~~~~~~~~ 181 (195)
..+. +..++| +||||||++|||+|+.++++.|+++|++++++++++++++.. .. ....+..++.|+
T Consensus 109 --------~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~~g~ 176 (213)
T 1lh0_A 109 --------GSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERDYGC 176 (213)
T ss_dssp --------SSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHHHCC
T ss_pred --------Ccee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHHcCC
Confidence 0111 234589 999999999999999999999999999999999999998521 11 122344566788
Q ss_pred eeeEEeec
Q 029314 182 TQFTITSE 189 (195)
Q Consensus 182 ~~~~~~~~ 189 (195)
+.++|...
T Consensus 177 ~v~sl~~~ 184 (213)
T 1lh0_A 177 KVISIITL 184 (213)
T ss_dssp EEEEEEEH
T ss_pred CeEEEEEH
Confidence 88777653
No 20
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.83 E-value=2.3e-20 Score=150.09 Aligned_cols=134 Identities=15% Similarity=0.188 Sum_probs=103.7
Q ss_pred ccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCE--EEEecCCCC
Q 029314 22 VIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKPKKL 96 (195)
Q Consensus 22 ~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~--~~~rk~~~~ 96 (195)
+-|+||.++++.-|+..++.+++.++...+.|++++.+ .++++|+|+++||+++|..+|+.+++|+ .++++..
T Consensus 16 ~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~-- 93 (204)
T 3hvu_A 16 ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSS-- 93 (204)
T ss_dssp ---CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEE--
T ss_pred CCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEE--
Confidence 46899999998779999999999999988888877642 2578999999999999999999999984 2343321
Q ss_pred CCceeeeeeee-cccceeEEEeec--ccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 97 PGEVISEEYSL-EYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 97 ~~~~~~~~~~~-~~~~~~~~~~~~--~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
|+. ++..+.+++..+ ..++||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 94 --------Y~~~~~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 157 (204)
T 3hvu_A 94 --------YGHSTVSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPT 157 (204)
T ss_dssp --------CSGGGTTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGG
T ss_pred --------ecCCCccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCC
Confidence 100 011112222222 2358999999999999999999999999999999999999999874
No 21
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.81 E-value=4.4e-20 Score=151.14 Aligned_cols=144 Identities=15% Similarity=0.083 Sum_probs=106.2
Q ss_pred ccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCEEEEe-cCCCCC
Q 029314 22 VIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVPMR-KPKKLP 97 (195)
Q Consensus 22 ~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~r-k~~~~~ 97 (195)
...+||.|+..+-|+..++.+++.++..++.|++++.+ .++|+|+|+++||+++|..+|+.++.++.+.+ |..+.|
T Consensus 31 ~~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P 110 (233)
T 1fsg_A 31 NADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPP 110 (233)
T ss_dssp EGGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCS
T ss_pred ccccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCC
Confidence 36789999877778999999999999989988887753 46889999999999999999999997432222 111112
Q ss_pred C--ceee-eeeeecccceeEEEeec--ccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 98 G--EVIS-EEYSLEYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 98 ~--~~~~-~~~~~~~~~~~~~~~~~--~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
. .++. .+|+.++..+...+... ..++||+||||||+++||+|+.+++++|+++|++.+.++++++++.
T Consensus 111 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~ 183 (233)
T 1fsg_A 111 FFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRT 183 (233)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred cEEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 1 1111 12221111222333221 2358999999999999999999999999999999999999998774
No 22
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.80 E-value=3.9e-19 Score=135.89 Aligned_cols=120 Identities=20% Similarity=0.233 Sum_probs=90.7
Q ss_pred hhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEE-EEecC-CCCCCceeeeeeeecccceeEEE
Q 029314 39 LLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV-PMRKP-KKLPGEVISEEYSLEYGKDVMEM 116 (195)
Q Consensus 39 i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~-~~rk~-~~~~~~~~~~~~~~~~~~~~~~~ 116 (195)
++.+.+.++.+++.|++++.+.++|+|+|+++||+++|..+|+.+++|+. .+++. .+..+.. .....+..
T Consensus 4 ~~~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 75 (153)
T 1vdm_A 4 VYLTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDER--------GEKPVITI 75 (153)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CC--------CSSCEEEE
T ss_pred eECCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCccc--------ccceeEec
Confidence 45677788888888888776457899999999999999999999999965 33322 1111100 00011333
Q ss_pred eecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCcc
Q 029314 117 HVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC 166 (195)
Q Consensus 117 ~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~ 166 (195)
......+|++||||||++|||+|+.++++.|+++|++.+.++++++++..
T Consensus 76 ~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~ 125 (153)
T 1vdm_A 76 PIHGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWT 125 (153)
T ss_dssp CCCSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTC
T ss_pred cCCcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCC
Confidence 22334689999999999999999999999999999999999999988753
No 23
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.79 E-value=3.4e-19 Score=144.39 Aligned_cols=133 Identities=14% Similarity=0.210 Sum_probs=101.9
Q ss_pred cCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhC---------CCE--E
Q 029314 23 IPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--V 88 (195)
Q Consensus 23 ~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~---------~p~--~ 88 (195)
.++||.|++.+-|++.++.+++.++...+.|++++.+ .+.++|+++++||+++|..+|+.++ +|+ .
T Consensus 18 ~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~~ 97 (217)
T 1z7g_A 18 LDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVD 97 (217)
T ss_dssp GGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEEE
T ss_pred ccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeeee
Confidence 6789999987789999999999999988888877752 4678999999999999999999998 564 2
Q ss_pred EEecCCCCCCceeeeeeeecccceeEEEee---cccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 89 PMRKPKKLPGEVISEEYSLEYGKDVMEMHV---GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 89 ~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
.++... |+.+...+.+.+.. ...++||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 98 ~i~~~~----------y~~~~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~~ 167 (217)
T 1z7g_A 98 FIRLKS----------YCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRT 167 (217)
T ss_dssp EECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred eEEEEE----------ecccccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECcc
Confidence 233111 10000111111111 12358999999999999999999999999999999999999998774
No 24
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.78 E-value=5.9e-19 Score=139.11 Aligned_cols=125 Identities=13% Similarity=0.201 Sum_probs=93.9
Q ss_pred EEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCEEE--EecCCCCCCceeeeeeee
Q 029314 33 FQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSL 107 (195)
Q Consensus 33 ~~d~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~--~rk~~~~~~~~~~~~~~~ 107 (195)
+.|++.++.+++.++..+..|++++.+ .++++|+++++||+++|..+|+.+++|+.. ++... .... .
T Consensus 7 ~~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~-y~~~-~------ 78 (183)
T 1hgx_A 7 MDDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS-YSGT-K------ 78 (183)
T ss_dssp CTTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC-------------
T ss_pred CcCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEe-cCCc-c------
Confidence 457888899999999999999887753 267899999999999999999999999643 21110 0000 0
Q ss_pred cccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 108 EYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 108 ~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
..+...+.......++||+||||||++|||+|+.++++.|+++|++.+.++++++++.
T Consensus 79 ~~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~ 136 (183)
T 1hgx_A 79 STGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDI 136 (183)
T ss_dssp ----CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred cccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 0011111111122358999999999999999999999999999999999999998864
No 25
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.77 E-value=5.1e-19 Score=146.02 Aligned_cols=140 Identities=16% Similarity=0.189 Sum_probs=105.3
Q ss_pred CCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCEEE-EecCCCCCCce-
Q 029314 26 FPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP-MRKPKKLPGEV- 100 (195)
Q Consensus 26 ~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~-~rk~~~~~~~~- 100 (195)
|..|...+.|+..++.+++.++...+.|++++.+ .+.++|+|+++||+.+|..|++.++.+++. +||..+.|...
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 4445544568888999999999888888876642 256899999999999999999999854433 24444444221
Q ss_pred -ee-eeeeecccceeEEEeecc--cCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 101 -IS-EEYSLEYGKDVMEMHVGA--VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 101 -~~-~~~~~~~~~~~~~~~~~~--~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
+. .+|+.+++.+.+++..+. .++||+||||||+++||+|+.+++++|++.|++.+.++++++++.
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~ 197 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRT 197 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECC
T ss_pred EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 21 345434444445554332 258999999999999999999999999999999999999999975
No 26
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.77 E-value=1.5e-18 Score=141.23 Aligned_cols=132 Identities=17% Similarity=0.260 Sum_probs=98.4
Q ss_pred CCCCCCCceEEechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhC---------CCE--EE
Q 029314 24 PDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIG---------AKF--VP 89 (195)
Q Consensus 24 ~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~---------~p~--~~ 89 (195)
..||.++..+-|+..++.+++.++..+..|++++.+ .++++|+|+++||+++|..+|+.++ +|+ ..
T Consensus 27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~ 106 (225)
T 2jbh_A 27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF 106 (225)
T ss_dssp GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence 357778766568888999999998888888877653 3678999999999999999999998 564 22
Q ss_pred EecCCCCCCceeeeeeeecccceeEEEee---cccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 90 MRKPKKLPGEVISEEYSLEYGKDVMEMHV---GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 90 ~rk~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
++... |+.++..+.+.+.. ...++||+||||||+++||+|+.++++.|+++|++.+.++++++++.
T Consensus 107 i~~~~----------y~~~~~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~ 175 (225)
T 2jbh_A 107 IRLKS----------YRNDQSMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRT 175 (225)
T ss_dssp EEEC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC
T ss_pred EEEEe----------ccCccccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 33211 10000111111111 12359999999999999999999999999999999999999998764
No 27
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.76 E-value=2.8e-18 Score=136.01 Aligned_cols=122 Identities=11% Similarity=0.173 Sum_probs=93.2
Q ss_pred EechhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCEEE--EecCCCCCCceeeeeeee-
Q 029314 34 QDITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSL- 107 (195)
Q Consensus 34 ~d~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~--~rk~~~~~~~~~~~~~~~- 107 (195)
-|+..++.+++.++...+.|++++.+ .++++|+|++.||+++|..+++.+++|+.. ++... |+.
T Consensus 6 ~di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~----------Y~~~ 75 (186)
T 3o7m_A 6 IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASS----------YGNQ 75 (186)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEE----------CC--
T ss_pred ccccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEE----------ecCC
Confidence 37788899999998888888876642 257899999999999999999999999632 33211 110
Q ss_pred cccceeEEEeec--ccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 108 EYGKDVMEMHVG--AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 108 ~~~~~~~~~~~~--~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
....+.+++..+ ..++|++||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 76 ~~~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 135 (186)
T 3o7m_A 76 TETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPE 135 (186)
T ss_dssp -----CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred CcccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 001112222222 2358999999999999999999999999999999999999999873
No 28
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.75 E-value=5.9e-18 Score=133.72 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=89.8
Q ss_pred chhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCE--EEEec-CCCCCCceeeeeeeecc
Q 029314 36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRK-PKKLPGEVISEEYSLEY 109 (195)
Q Consensus 36 ~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~--~~~rk-~~~~~~~~~~~~~~~~~ 109 (195)
++.++.+++.++..+..|++++.+ .++|+|+++++||+++|..+|+.+++|+ ..+++ +.+.. .. ..
T Consensus 12 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~--~~------~~ 83 (185)
T 2geb_A 12 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSS--TK------SS 83 (185)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTT--HH------HH
T ss_pred cceEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCC--Cc------cC
Confidence 445677888888888888876642 2578999999999999999999999986 33332 11100 00 00
Q ss_pred cceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 110 ~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
+.-.+.......++||+||||||++|||+|+.++++.|+++|++.+.++++++++.
T Consensus 84 ~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 139 (185)
T 2geb_A 84 GIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 139 (185)
T ss_dssp CCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ccEEEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCC
Confidence 11111111112358999999999999999999999999999999999999998874
No 29
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.74 E-value=7.4e-18 Score=135.96 Aligned_cols=123 Identities=12% Similarity=0.111 Sum_probs=90.2
Q ss_pred EechhhhcCHHHHHHHHHHHHHHhcC---------CCccEEEEeCCcchHhHHHHHHHh---CCCE--EEEecCCCCCCc
Q 029314 34 QDITTLLLDTKAFRDTIDLFVERYKD---------KNISVVAGIEARGFIFGPPIALAI---GAKF--VPMRKPKKLPGE 99 (195)
Q Consensus 34 ~d~~~i~~~p~~~~~l~~~la~~~~~---------~~~D~Iv~v~~~G~~lA~~la~~l---~~p~--~~~rk~~~~~~~ 99 (195)
.|+..++.+++.++..+..|++++.+ .++++|+|+++||+++|..+|+.+ ++|+ ..+++... ...
T Consensus 21 ~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y-~~~ 99 (211)
T 1pzm_A 21 PMSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSY-GSG 99 (211)
T ss_dssp TTEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC------
T ss_pred cccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeec-cCc
Confidence 47778888998888777777765532 357899999999999999999999 9995 33432111 000
Q ss_pred eeeeeeeecccceeEEEee--cccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 100 VISEEYSLEYGKDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~--~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
+.. .+...+.. ...++||+||||||++|||+|+.+++++|+++|++.+.++++++++.
T Consensus 100 ~~~--------~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~ 159 (211)
T 1pzm_A 100 VET--------SGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPS 159 (211)
T ss_dssp ----------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ccc--------CCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 000 00111111 12358999999999999999999999999999999999999998873
No 30
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.74 E-value=7.6e-18 Score=132.25 Aligned_cols=125 Identities=17% Similarity=0.188 Sum_probs=85.3
Q ss_pred chhhhcCHHHHHHHHHHHHHHhcC----CCccEEEEeCCcchHhHHHHHHHhC----CC--EEEEecC-CCCCCceeeee
Q 029314 36 ITTLLLDTKAFRDTIDLFVERYKD----KNISVVAGIEARGFIFGPPIALAIG----AK--FVPMRKP-KKLPGEVISEE 104 (195)
Q Consensus 36 ~~~i~~~p~~~~~l~~~la~~~~~----~~~D~Iv~v~~~G~~lA~~la~~l~----~p--~~~~rk~-~~~~~~~~~~~ 104 (195)
...++.+++.+......|++++.+ .++|+|++++.||+++|..+|+.++ +| +..+++. .+..+......
T Consensus 3 ~~~~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 82 (181)
T 1a3c_A 3 QKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSN 82 (181)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------C
T ss_pred cccCccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCcc
Confidence 445677888888888888776642 2678999999999999999999987 44 3333321 11111100000
Q ss_pred eeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcC-CcEEEEEEEEecC
Q 029314 105 YSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIFILICIQMLN 164 (195)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~G-a~~V~~~~lv~~~ 164 (195)
. ......+.+ ...++|++||||||++|||+|+.++++.|+++| ++.+.++++++++
T Consensus 83 ~--~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 83 D--EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp C--CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred c--eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 0 001111222 123589999999999999999999999999997 9999999999886
No 31
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.73 E-value=1.2e-17 Score=133.95 Aligned_cols=122 Identities=16% Similarity=0.131 Sum_probs=89.2
Q ss_pred chhhhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCE--EEEecC-CCCCCceeeeeeeecc
Q 029314 36 ITTLLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKF--VPMRKP-KKLPGEVISEEYSLEY 109 (195)
Q Consensus 36 ~~~i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~--~~~rk~-~~~~~~~~~~~~~~~~ 109 (195)
+..++.+++.+...+..|++++.+ .++|+|+++++||+++|..+|+.+++|+ ..+++. .. .... ..
T Consensus 32 ~~~~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~--~~~~------~~ 103 (205)
T 1yfz_A 32 IEEILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYG--SSTK------SS 103 (205)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECS--HHHH------HH
T ss_pred cceEEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEecc--CCcc------cc
Confidence 445677888888888888776642 2578999999999999999999999996 233321 11 0000 00
Q ss_pred cceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 110 GKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 110 ~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
+...+.......++|++||||||++|||+|+.++++.|+++|++.|.++++++++.
T Consensus 104 ~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~ 159 (205)
T 1yfz_A 104 GIVKIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPE 159 (205)
T ss_dssp CCEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred ceEEEeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCc
Confidence 11111111122358999999999999999999999999999999999999998873
No 32
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.73 E-value=3e-17 Score=133.26 Aligned_cols=123 Identities=17% Similarity=0.162 Sum_probs=88.2
Q ss_pred echhhhcCHHHHHHHHHHHHHHhc----CCC-----c-cEEEEeCCcchHhHHHHHHHh---CCCEE--EEec-CCCCCC
Q 029314 35 DITTLLLDTKAFRDTIDLFVERYK----DKN-----I-SVVAGIEARGFIFGPPIALAI---GAKFV--PMRK-PKKLPG 98 (195)
Q Consensus 35 d~~~i~~~p~~~~~l~~~la~~~~----~~~-----~-D~Iv~v~~~G~~lA~~la~~l---~~p~~--~~rk-~~~~~~ 98 (195)
|+..++.+++.++..++.|++.+. ... + ++|+|++.||+++|..||+.+ ++|+. .+++ +...
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~-- 83 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGE-- 83 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCC--
Confidence 566677888888877777776553 212 2 899999999999999999999 99953 3332 1110
Q ss_pred ceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 99 EVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
...+ .+.-.+.......++||+||||||++|||+|+.++++.|+++|++.|.++++++++.
T Consensus 84 ~~~~------~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~ 144 (220)
T 1tc1_A 84 GLTS------SGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKRE 144 (220)
T ss_dssp -------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTT
T ss_pred Cccc------CCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCc
Confidence 0000 000011111122358999999999999999999999999999999999999998874
No 33
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.71 E-value=8.5e-17 Score=126.95 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=85.1
Q ss_pred hhcCHHHHHHHHHHHHHHhcC---CCccEEEEeCCcchHhHHHHHHHhCCCEE--EEecCCCCCCceeeeeeeeccccee
Q 029314 39 LLLDTKAFRDTIDLFVERYKD---KNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYGKDV 113 (195)
Q Consensus 39 i~~~p~~~~~l~~~la~~~~~---~~~D~Iv~v~~~G~~lA~~la~~l~~p~~--~~rk~~~~~~~~~~~~~~~~~~~~~ 113 (195)
++.+++.++...+.|++++.+ .++++|+++.+||+++|..+++.+++|+. +++.... ..... ..+.-.
T Consensus 12 ~li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y-~~~~~------~~~~v~ 84 (181)
T 2ywu_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSY-GNAFK------SSGEVE 84 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------C
T ss_pred EEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEe-cCCcc------ccCcEE
Confidence 466777777777777765542 25789999999999999999999999963 3332110 00000 001111
Q ss_pred EEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 114 MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 114 ~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
+.......++||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 85 i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~ 136 (181)
T 2ywu_A 85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCC
Confidence 1111122359999999999999999999999999999999999999999864
No 34
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.70 E-value=6.2e-17 Score=124.13 Aligned_cols=111 Identities=17% Similarity=0.211 Sum_probs=84.8
Q ss_pred hhcCHHHHHHHHHHHHHHhcC-CCccEEEEeCCcchHhHHHHHHHhCCC-EEEEecCCCCCCceeeeeeeecccceeEEE
Q 029314 39 LLLDTKAFRDTIDLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAK-FVPMRKPKKLPGEVISEEYSLEYGKDVMEM 116 (195)
Q Consensus 39 i~~~p~~~~~l~~~la~~~~~-~~~D~Iv~v~~~G~~lA~~la~~l~~p-~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~ 116 (195)
++.+++.++..+..|++++.+ .++|+|+|+++||+++|..+|+.+++| +.+++.... . . +..+...+
T Consensus 5 ~l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y-~-~---------~~~~~~~~ 73 (152)
T 1nul_A 5 YIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSY-D-H---------DNQRELKV 73 (152)
T ss_dssp EECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEE
T ss_pred EecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEe-c-C---------cccceEEE
Confidence 567889999999999998875 457899999999999999999999999 655442211 0 0 01111222
Q ss_pred eecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 117 HVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 117 ~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
..+...+||+||||||+++||+|+.++++.|++ +.++++++++.
T Consensus 74 ~~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~ 117 (152)
T 1nul_A 74 LKRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPA 117 (152)
T ss_dssp EECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGG
T ss_pred ecCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCC
Confidence 223335999999999999999999999999986 78999999974
No 35
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.70 E-value=7.9e-17 Score=126.60 Aligned_cols=120 Identities=17% Similarity=0.131 Sum_probs=82.4
Q ss_pred hhcCHHHHHHHHHHHHHHhc----CCCccEEEEeCCcchHhHHHHHHHhC----CCEE--EEecC-CCCCCceeeeeeee
Q 029314 39 LLLDTKAFRDTIDLFVERYK----DKNISVVAGIEARGFIFGPPIALAIG----AKFV--PMRKP-KKLPGEVISEEYSL 107 (195)
Q Consensus 39 i~~~p~~~~~l~~~la~~~~----~~~~D~Iv~v~~~G~~lA~~la~~l~----~p~~--~~rk~-~~~~~~~~~~~~~~ 107 (195)
++.+++.++.....|++++. +.+.++|+|+++||+++|..+|+.++ +|+. .+++. .+.... ... .
T Consensus 6 ~l~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~--~~~--~ 81 (181)
T 1ufr_A 6 ELMNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDLT--EIG--Y 81 (181)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------
T ss_pred eecCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCccc--ccc--c
Confidence 45667777666666666553 23467999999999999999999887 7763 23321 110000 000 0
Q ss_pred cccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcC-CcEEEEEEEEecC
Q 029314 108 EYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIFILICIQMLN 164 (195)
Q Consensus 108 ~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~G-a~~V~~~~lv~~~ 164 (195)
.+....+.+ ...++|++|||||||+|||+|+.++++.|+++| ++.+.++++++++
T Consensus 82 ~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 82 RPQVRETRI--PFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp -CEEEEEEE--CSCCTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred cceeccccc--CcCCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 000111222 123589999999999999999999999999999 9999999999887
No 36
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.69 E-value=1.6e-16 Score=124.89 Aligned_cols=120 Identities=14% Similarity=0.171 Sum_probs=84.3
Q ss_pred hhcCHHHHHHHHHHHHHHhcC---CCc-cEEEEeCCcchHhHHHHHHHhCCCEE--EEecCCCCCCceeeeeeeecccce
Q 029314 39 LLLDTKAFRDTIDLFVERYKD---KNI-SVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYGKD 112 (195)
Q Consensus 39 i~~~p~~~~~l~~~la~~~~~---~~~-D~Iv~v~~~G~~lA~~la~~l~~p~~--~~rk~~~~~~~~~~~~~~~~~~~~ 112 (195)
++.+++.++...+.|++++.+ ... ++|+|+++||+++|..+++.+++|+. ++++..... .+. ..+.-
T Consensus 7 ~l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~-~~~------~~~~v 79 (177)
T 3ohp_A 7 VMISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGN-SMQ------SSRDV 79 (177)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CCC
T ss_pred EeeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcC-CCc------cCCcE
Confidence 456677777777777665532 124 89999999999999999999999862 344211100 000 00111
Q ss_pred eEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 113 VMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 113 ~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
.+.......++||+||||||+++||+|+.++++.|++.|++.+.++++++++.
T Consensus 80 ~i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~ 132 (177)
T 3ohp_A 80 RILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPT 132 (177)
T ss_dssp CEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred EEecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCc
Confidence 11111112358999999999999999999999999999999999999999873
No 37
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.66 E-value=8.4e-16 Score=123.33 Aligned_cols=118 Identities=19% Similarity=0.168 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEE--EecCCCCCCceeeeeeeecccc-----------
Q 029314 45 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYGK----------- 111 (195)
Q Consensus 45 ~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~--~rk~~~~~~~~~~~~~~~~~~~----------- 111 (195)
..+.+++.+.+ +. .+.|+|+|+++||+++|..+|+.+++|+.. .+|.+....+...-....+.+.
T Consensus 9 a~~~La~~i~~-~~-~~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~ 86 (208)
T 1wd5_A 9 AGALLAEALAP-LG-LEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYA 86 (208)
T ss_dssp HHHHHHHHHGG-GC-CCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHS
T ss_pred HHHHHHHHHHh-cC-CCCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhccc
Confidence 34445555532 22 356899999999999999999999999865 4443221100000000000000
Q ss_pred -----------------e---eEE-EeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecC
Q 029314 112 -----------------D---VME-MHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLN 164 (195)
Q Consensus 112 -----------------~---~~~-~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~ 164 (195)
. .+. ......++||+||||||++|||+|+.++++.|+++|++.|.+++.+.++
T Consensus 87 ~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~ 160 (208)
T 1wd5_A 87 DQSYLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASP 160 (208)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCH
Confidence 0 000 0001235899999999999999999999999999999999999988664
No 38
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.65 E-value=1.6e-15 Score=121.47 Aligned_cols=122 Identities=15% Similarity=0.130 Sum_probs=83.9
Q ss_pred hhhcCHHHHHHHHHHHHHHhc----C-------CCccEEEEeCCcchHhHHHHHHHh----CCCEE--EEecC-CCCCCc
Q 029314 38 TLLLDTKAFRDTIDLFVERYK----D-------KNISVVAGIEARGFIFGPPIALAI----GAKFV--PMRKP-KKLPGE 99 (195)
Q Consensus 38 ~i~~~p~~~~~l~~~la~~~~----~-------~~~D~Iv~v~~~G~~lA~~la~~l----~~p~~--~~rk~-~~~~~~ 99 (195)
.++.+++.++...+.|+..+. + .+.++|+|+++||+++|..||+.+ ++|+. .++.. .+....
T Consensus 14 ~~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~~ 93 (201)
T 1w30_A 14 RELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLM 93 (201)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC---
T ss_pred eEEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCcc
Confidence 456778877777777766543 2 256799999999999999999999 47642 22221 110000
Q ss_pred eeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcC-CcEEEEEEEEecCc
Q 029314 100 VISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIFILICIQMLNA 165 (195)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~G-a~~V~~~~lv~~~~ 165 (195)
. .. ......+.+. ...++||+|||||||+|||+|+.++++.|+++| ++.+.++++++++.
T Consensus 94 ~-~~----~~~~~~~~~~-~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~~ 154 (201)
T 1w30_A 94 I-KP----PRPLASTSIP-AGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRGH 154 (201)
T ss_dssp ----------CCCCCBCC-TTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECCC
T ss_pred c-cc----cceeecccCC-CccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecCC
Confidence 0 00 0000011111 122589999999999999999999999999999 99999999999854
No 39
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.64 E-value=3.8e-15 Score=125.19 Aligned_cols=117 Identities=22% Similarity=0.270 Sum_probs=86.8
Q ss_pred HHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEee-cccCCCCEEEEE
Q 029314 52 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHV-GAVQAGERALIV 130 (195)
Q Consensus 52 ~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gk~VLLV 130 (195)
.|++++.+.+.++|++++.||+++|..+|+.+++|+.+++|+++.++ .+++.. ...++||+|+||
T Consensus 144 ~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g--------------~v~i~~~~~dv~gk~vliV 209 (286)
T 3lrt_A 144 AIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDR--------------TVEMKVPNVDVNGKKLLIV 209 (286)
T ss_dssp HHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTE--------------EEEEEESCCCCTTCEEEEE
T ss_pred HHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCC--------------cEEEeeccccCCcCEEEEE
Confidence 33444444567899999999999999999999999998887653221 112211 223599999999
Q ss_pred eeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEe
Q 029314 131 DDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTIT 187 (195)
Q Consensus 131 DDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (195)
||+++||+|+.++++.|++.|++.+++++....-. ..+.+.+ +.++..+-.|
T Consensus 210 DDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s----~~a~~~l-~s~i~~vv~T 261 (286)
T 3lrt_A 210 DDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFV----NGSENKI-LQNADEIHVT 261 (286)
T ss_dssp EEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCC----TTHHHHH-TTTCSEEEEE
T ss_pred eccccccHHHHHHHHHHHhCCCCEEEEEEEEeecC----chHHHHH-HcCCCEEEEe
Confidence 99999999999999999999999999999875432 1244444 5566555444
No 40
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.63 E-value=3.2e-15 Score=121.39 Aligned_cols=126 Identities=17% Similarity=0.169 Sum_probs=87.2
Q ss_pred hhhcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCC------CEEEEecC-CCCCCceeeeeeeeccc
Q 029314 38 TLLLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGA------KFVPMRKP-KKLPGEVISEEYSLEYG 110 (195)
Q Consensus 38 ~i~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~------p~~~~rk~-~~~~~~~~~~~~~~~~~ 110 (195)
.++.+.+.++..++.|++++.+.++++|+|+++||+++|..||+.|++ |+..++.. ...... .... ....+
T Consensus 6 ~~~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~-~~~~-~~~~g 83 (221)
T 2xbu_A 6 KQYISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNS-VGSE-VEEVG 83 (221)
T ss_dssp CEECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC---------------
T ss_pred eEecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCcc-cccc-ccccC
Confidence 356778888888999998886567899999999999999999999998 33333211 000000 0000 00001
Q ss_pred ceeEE---Ee---ecccCCCCEEEEEeeeccchHHHHHHHHHHhh--------cCC---------cEEEEEEEEecCc
Q 029314 111 KDVME---MH---VGAVQAGERALIVDDLVATGGTLSAAIRLLGS--------FQN---------HIFILICIQMLNA 165 (195)
Q Consensus 111 ~~~~~---~~---~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~--------~Ga---------~~V~~~~lv~~~~ 165 (195)
...+. +. ....++||+|||||||++||.||.++++.|++ .|+ +.+.++++++|+.
T Consensus 84 ~~~~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 84 VKVSRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp CEEEEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred ceeeeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 11110 10 02236999999999999999999999999997 786 5899999999873
No 41
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.60 E-value=1.9e-14 Score=113.52 Aligned_cols=118 Identities=15% Similarity=0.184 Sum_probs=83.1
Q ss_pred hhhcCHHHHHHHHHHHHHHh----cCCCccEEEEeCCcchHhHHHHHHHhCCCEEE--EecCCCCCCceeeeeeeec-cc
Q 029314 38 TLLLDTKAFRDTIDLFVERY----KDKNISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLE-YG 110 (195)
Q Consensus 38 ~i~~~p~~~~~l~~~la~~~----~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~--~rk~~~~~~~~~~~~~~~~-~~ 110 (195)
.++.+.+.++...+.||.++ .+ +..+++|+.+||++||..|++.++.|+.. ++-. +|... ..
T Consensus 11 ~vlis~~~I~~~i~rlA~eI~e~~~~-~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~s----------sy~~~~~~ 79 (181)
T 3acd_A 11 PVQISAEAIKKRVEELGGEIARDYQG-KTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAIS----------SYGNAFKS 79 (181)
T ss_dssp SCCBCHHHHHHHHHHHHHHHHHHTTT-CCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC------------------
T ss_pred cEEeCHHHHHHHHHHHHHHHHHHhCC-CCcEEEEEecCcHHHHHHHHHhcCCCccccceEEE----------EecCCcCC
Confidence 45667777766666666554 43 34589999999999999999999988643 2111 11000 01
Q ss_pred ceeEEEee--cccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCcc
Q 029314 111 KDVMEMHV--GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNAC 166 (195)
Q Consensus 111 ~~~~~~~~--~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~ 166 (195)
.+...+.. ...++||+|||||||++||.|++++.+.|++.|++.+.++++++++.-
T Consensus 80 ~g~~~~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~~ 137 (181)
T 3acd_A 80 SGEVELLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSR 137 (181)
T ss_dssp ----CEEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred CCceEeccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCcc
Confidence 11111111 233699999999999999999999999999999999999999997653
No 42
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.58 E-value=9e-15 Score=122.86 Aligned_cols=119 Identities=20% Similarity=0.268 Sum_probs=82.3
Q ss_pred HHHHHHhcC-CCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEE
Q 029314 51 DLFVERYKD-KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALI 129 (195)
Q Consensus 51 ~~la~~~~~-~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLL 129 (195)
..|++.+.+ .+.++|++++.||+++|..+++.+++|+.+++|+++.+. ...+.+. +..++||+|+|
T Consensus 144 ~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~------------~~~~~l~-g~~v~Gk~VlI 210 (284)
T 1u9y_A 144 PKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPT------------EIQIAPK-TLDAKDRDVFI 210 (284)
T ss_dssp HHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------------------CCBS-SCCCTTCCEEE
T ss_pred HHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCC------------eEEEEec-CccCCCCEEEE
Confidence 344444432 356799999999999999999999999988776553211 0111121 22358999999
Q ss_pred EeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEE
Q 029314 130 VDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 130 VDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (195)
|||++|||+|+.++++.|+++|++.+.++++... ++ ..+.+.+++.++..+-.
T Consensus 211 VDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v---~s-~~a~~~l~~~~i~~vv~ 263 (284)
T 1u9y_A 211 VDDIISTGGTMATAVKLLKEQGAKKIIAACVHPV---LI-GDALNKLYSAGVEEVVG 263 (284)
T ss_dssp EEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECC---CC-TTHHHHHHHHTCSEEEE
T ss_pred EecccCchHHHHHHHHHHHHCCCcEEEEEEEeEe---cC-cHHHHHHHhCCCCEEEE
Confidence 9999999999999999999999999999998533 22 23455556655554433
No 43
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=99.57 E-value=2.4e-14 Score=122.23 Aligned_cols=120 Identities=23% Similarity=0.210 Sum_probs=83.5
Q ss_pred HHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEE
Q 029314 49 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERAL 128 (195)
Q Consensus 49 l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VL 128 (195)
+++++.+.+.+.+.++|++++.||+.+|..+|+.+++|+.+++|+++.++.. ....+. +. ++||+|+
T Consensus 151 l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~~~v-----------~~~~l~-g~-v~gk~vi 217 (326)
T 3s5j_B 151 VLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKANEV-----------DRMVLV-GD-VKDRVAI 217 (326)
T ss_dssp HHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC------------------CCEEEE-SC-CTTSEEE
T ss_pred HHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCCCee-----------eEEecc-cc-CCCCEEE
Confidence 3444445444334579999999999999999999999999888866422210 011121 33 5999999
Q ss_pred EEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeE
Q 029314 129 IVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFT 185 (195)
Q Consensus 129 LVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 185 (195)
||||+++||+|+.++++.|++.|++.+.+++.... ++ ..+.+.+++.++..+-
T Consensus 218 IVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v---~~-~~a~e~l~~~~i~~vv 270 (326)
T 3s5j_B 218 LVDDMADTCGTICHAADKLLSAGATRVYAILTHGI---FS-GPAISRINNACFEAVV 270 (326)
T ss_dssp EEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEEC---CC-TTHHHHHHHSCCSEEE
T ss_pred EEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecc---cC-chHHHHHhhCCCCEEE
Confidence 99999999999999999999999999999986432 21 1244445545544443
No 44
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.57 E-value=1.4e-14 Score=130.41 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEE--EEecCCCCCCcee--eeeeeecccceeEEEeec
Q 029314 44 KAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVI--SEEYSLEYGKDVMEMHVG 119 (195)
Q Consensus 44 ~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~--~~rk~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 119 (195)
.+.+.+++.+.+.+.+.++|+|+++|.+|+++|..+|+.+++|+. +++++.. ....+ .+..+..+.+..+....
T Consensus 277 ~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~-~~t~i~~~~~~R~~~v~~~~~~~~- 354 (504)
T 1ecf_A 277 NMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYV-GRTFIMPGQQLRRKSVRRKLNANR- 354 (504)
T ss_dssp HHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCC-CCCCCCSSSCCCCCCSTTTEEECG-
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEeccc-CCceeCccHHHHHHHHHhhhcccc-
Confidence 344445555554454346799999999999999999999999986 3443322 11110 11111111122333322
Q ss_pred ccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEE
Q 029314 120 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQ 161 (195)
Q Consensus 120 ~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv 161 (195)
..++||+||||||++|||+|+.+++++|+++||+.|.++++.
T Consensus 355 ~~v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~ 396 (504)
T 1ecf_A 355 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAA 396 (504)
T ss_dssp GGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESS
T ss_pred ccCCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEe
Confidence 236999999999999999999999999999999999999874
No 45
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.53 E-value=8.4e-14 Score=118.62 Aligned_cols=87 Identities=22% Similarity=0.303 Sum_probs=68.9
Q ss_pred CCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHH
Q 029314 60 KNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT 139 (195)
Q Consensus 60 ~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~T 139 (195)
++..+|++++.||+.+|..+|+.+++|+..++|+++.. +....+.+. +. ++||+|+||||++|||+|
T Consensus 166 ~~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~-----------~~~~~~~l~-~~-v~gk~VlLVDDiitTG~T 232 (317)
T 1dku_A 166 LEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRP-----------NVAEVMNIV-GN-IEGKTAILIDDIIDTAGT 232 (317)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC--------------------CEEE-SC-CTTCEEEEECSEESSCHH
T ss_pred CCCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEeccc-----------cceeEEEec-cc-CCCCEEEEEecccCCCHH
Confidence 35569999999999999999999999998777654311 111223333 23 599999999999999999
Q ss_pred HHHHHHHHhhcCCcEEEEEE
Q 029314 140 LSAAIRLLGSFQNHIFILIC 159 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~ 159 (195)
+.++++.|+++|++.|.+++
T Consensus 233 l~~aa~~Lk~~Ga~~V~~~~ 252 (317)
T 1dku_A 233 ITLAANALVENGAKEVYACC 252 (317)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCcEEEEEE
Confidence 99999999999999999998
No 46
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.52 E-value=7e-14 Score=121.71 Aligned_cols=114 Identities=12% Similarity=0.086 Sum_probs=73.6
Q ss_pred HHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCC----------Cceeeeeeeecccce------
Q 029314 49 TIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLP----------GEVISEEYSLEYGKD------ 112 (195)
Q Consensus 49 l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~----------~~~~~~~~~~~~~~~------ 112 (195)
+++++.+.+.+.+.++|++++.||+++|..+|+.|++|+.+++|++... .+.....+..+++..
T Consensus 179 La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~ 258 (379)
T 2ji4_A 179 LLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHPSLEIPMLIP 258 (379)
T ss_dssp HHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC-------------------------------------
T ss_pred HHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecccccccccccCCcccccccccccccchhhhhh
Confidence 3444444443335679999999999999999999999998886654310 000000000000000
Q ss_pred e--EEEeecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEe
Q 029314 113 V--MEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQM 162 (195)
Q Consensus 113 ~--~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~ 162 (195)
. ..+.....++||+|+||||+++||+|+.++++.|++.|++.|.+++...
T Consensus 259 ~~~~~~~l~g~v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~ 310 (379)
T 2ji4_A 259 KEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHG 310 (379)
T ss_dssp ----CCCEESCCTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred hcccccccccCCCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEEEEEee
Confidence 0 0001112369999999999999999999999999999999999888643
No 47
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.49 E-value=8.9e-14 Score=123.77 Aligned_cols=115 Identities=16% Similarity=0.112 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEE--EEecCCCCCCc-eeeeeeeecccceeEEEeeccc
Q 029314 45 AFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGE-VISEEYSLEYGKDVMEMHVGAV 121 (195)
Q Consensus 45 ~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~--~~rk~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 121 (195)
.-..+++.|++.+. .+.|+|+++|.+|..+|..+|+.+++|+. ..+++....+. ...+..+..+....+..... .
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~-~ 335 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRG-V 335 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECHH-H
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhcccccc-c
Confidence 44567777777664 36799999999999999999999999986 33433221110 01111111112223432212 3
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQ 161 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv 161 (195)
++||+||||||++|||+|+.++++.|+++||+.|.+++++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~ 375 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS 375 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 5899999999999999999999999999999999999864
No 48
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=99.49 E-value=2.1e-13 Score=116.09 Aligned_cols=107 Identities=19% Similarity=0.242 Sum_probs=72.3
Q ss_pred CccEEEEeCCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHH
Q 029314 61 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTL 140 (195)
Q Consensus 61 ~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl 140 (195)
+.++|++++.||+.+|..+|+.+++|+.+++|+++.++.. ..+.+. +. ++||+|+||||+++||+|+
T Consensus 166 ~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~~v-----------~~~~i~-g~-v~gk~viiVDDii~TG~Tl 232 (319)
T 3dah_A 166 PDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKANVA-----------EVMNII-GE-VEGRTCVIMDDMVDTAGTL 232 (319)
T ss_dssp TTEEEECCSSTTHHHHHHHHHHTTCEEEC---------------------------------CCSEEEEEEEEESSCHHH
T ss_pred CCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCCce-----------EEEEcc-cc-CCCCEEEEEecccCchHHH
Confidence 4569999999999999999999999998887765422110 011221 23 5899999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceee
Q 029314 141 SAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQF 184 (195)
Q Consensus 141 ~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~ 184 (195)
.++++.|++.|++.+.+++.... ++ ..+.+.++..++..+
T Consensus 233 ~~a~~~L~~~Ga~~v~~~~tH~v---~s-~~a~~~l~~~~i~~v 272 (319)
T 3dah_A 233 CKAAQVLKERGAKQVFAYATHPV---LS-GGAADRIAASALDEL 272 (319)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEC---CC-TTHHHHHHTSSCSEE
T ss_pred HHHHHHHHHcCCCEEEEEEEeec---CC-hHHHHHHHhCCCCEE
Confidence 99999999999999999997543 11 124444554454443
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.44 E-value=1.1e-13 Score=112.96 Aligned_cols=112 Identities=7% Similarity=0.162 Sum_probs=79.6
Q ss_pred hhhcCHHHHHHHHHHHHHHhcC---C--CccEEEEeCCcchHhHHHHHHHhCCCEEE--EecCCCCCCceeeeeeeeccc
Q 029314 38 TLLLDTKAFRDTIDLFVERYKD---K--NISVVAGIEARGFIFGPPIALAIGAKFVP--MRKPKKLPGEVISEEYSLEYG 110 (195)
Q Consensus 38 ~i~~~p~~~~~l~~~la~~~~~---~--~~D~Iv~v~~~G~~lA~~la~~l~~p~~~--~rk~~~~~~~~~~~~~~~~~~ 110 (195)
.++.+.+.+...++.|++++.+ . +.++|+|+.+||+++|..+++.+++|+.. ++.. +|+....
T Consensus 33 ~vlis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs----------~y~~~~s 102 (230)
T 1dqn_A 33 HLLATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVS----------SYKGTRQ 102 (230)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCE----------EEECSSC
T ss_pred cEecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEE----------EeCCCcc
Confidence 3566777777666666655531 2 46799999999999999999999999743 2211 1110000
Q ss_pred ceeEEE-ee--cccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 111 KDVMEM-HV--GAVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 111 ~~~~~~-~~--~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
.+ ..+ .. ...++||+|||||||++||.||.++++.|++ +.++++++++.
T Consensus 103 ~~-v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 103 ES-VVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp EE-EECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred Cc-eEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 11 222 11 1125999999999999999999999999998 88889999885
No 50
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.24 E-value=1e-10 Score=94.01 Aligned_cols=134 Identities=20% Similarity=0.130 Sum_probs=87.7
Q ss_pred CCChHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHh-cC---------------------CCccEE
Q 029314 8 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERY-KD---------------------KNISVV 65 (195)
Q Consensus 8 ~~~~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~-~~---------------------~~~D~I 65 (195)
.+||..+++...+|.-.. + -.. ....+++++..|+... ++ .+..++
T Consensus 7 ~~~p~~~~~lt~lRd~~t-~--------~~~---Fr~~~~~l~~ll~~ea~~~l~~~~~~V~tPl~~~~~~~~~~~~~~v 74 (209)
T 1i5e_A 7 FDHPLIQHKLTYIRDKNT-G--------TKE---FRELVDEVATLMAFEITRDLPLEEVEIETPVSKARAKVIAGKKLGV 74 (209)
T ss_dssp CCCHHHHHHHHHHHCTTC-C--------HHH---HHHHHHHHHHHHHHHHGGGCCEEEEEEECSSCEEEEEEECCCCEEE
T ss_pred cCCHHHHHHHHHHHCCCC-C--------HHH---HHHHHHHHHHHHHHHHHhcCCCcceEEecCCceeeeeEecCCceEE
Confidence 578999999999984321 0 011 1233445555555431 11 123478
Q ss_pred EEeCCcchHhHHHHHHHh-CCCEEEEecCCCCCCceeeeeeeeccccee-EEEeecccCCCCEEEEEeeeccchHHHHHH
Q 029314 66 AGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDV-MEMHVGAVQAGERALIVDDLVATGGTLSAA 143 (195)
Q Consensus 66 v~v~~~G~~lA~~la~~l-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a 143 (195)
+++.++|++++..+.+.+ ..++..+.+.+.. ++.+.. +.......++|++|+||||+++||+|+.++
T Consensus 75 V~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~-----------~t~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T~~~a 143 (209)
T 1i5e_A 75 IPILRAGIGMVDGILKLIPAAKVGHIGLYRDP-----------QTLKPVEYYVKLPSDVEERDFIIVDPMLATGGSAVAA 143 (209)
T ss_dssp EEBTTGGGGGHHHHHHHCTTSEECEEEEECCT-----------TCSSCEEEEEECCTTTTTSEEEEECSEESSSHHHHHH
T ss_pred EEEecCChHHHHHHHHhCCCCeEEEEEEEEcC-----------CCCceEEEEEcCCCccCCCEEEEEcCCCcCHHHHHHH
Confidence 999999999999999988 3444333222110 011111 112222235899999999999999999999
Q ss_pred HHHHhhcCCcEEEEEEEEecC
Q 029314 144 IRLLGSFQNHIFILICIQMLN 164 (195)
Q Consensus 144 ~~~L~~~Ga~~V~~~~lv~~~ 164 (195)
++.|++.|++.+.+++++..+
T Consensus 144 ~~~L~~~G~~~I~~~~lv~~~ 164 (209)
T 1i5e_A 144 IDALKKRGAKSIKFMCLIAAP 164 (209)
T ss_dssp HHHHHHTTCCCEEEECSEECH
T ss_pred HHHHHHcCCCEEEEEEEEECH
Confidence 999999999999999987654
No 51
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.15 E-value=6.4e-10 Score=90.05 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=88.8
Q ss_pred CCCChHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHh-cCC---------------------CccE
Q 029314 7 KAQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERY-KDK---------------------NISV 64 (195)
Q Consensus 7 ~~~~~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~-~~~---------------------~~D~ 64 (195)
-+++|..+.+...+|.-.. + -.. ....+++++..|+... ++. +.-+
T Consensus 18 ~~~~p~i~~~lt~lRd~~t-~--------~~~---Fr~~~~~l~~ll~yEa~~~lp~~~~~v~TP~g~~~g~~~~g~~lv 85 (221)
T 1o5o_A 18 VVDHPLIKHKLTIMRDKNT-G--------PKE---FRELLREITLLLAYEATRHLKCEEVEVETPITKTIGYRINDKDIV 85 (221)
T ss_dssp ECCCHHHHHHHHHHHSTTC-C--------HHH---HHHHHHHHHHHHHHHHTTTCCCEEEEEECSSCEEEEEECCSTTEE
T ss_pred ecCCHHHHHHHHHHHCCCC-C--------HHH---HHHHHHHHHHHHHHHHHhcCCceEEEEECCCceEEEEEecCCeEE
Confidence 3688999999999984321 0 011 1234455555555432 110 1127
Q ss_pred EEEeCCcchHhHHHHHHHh-CCCEEEEecCCCCCCceeeeeeeecccceeE-EEeecccCCCCEEEEEeeeccchHHHHH
Q 029314 65 VAGIEARGFIFGPPIALAI-GAKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLSA 142 (195)
Q Consensus 65 Iv~v~~~G~~lA~~la~~l-~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~ 142 (195)
+|++.++|+.++..+++.+ +.++..+...+.. ..++... .......++|++|+||||++.||+|+.+
T Consensus 86 iV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~-----------~t~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl~~ 154 (221)
T 1o5o_A 86 VVPILRAGLVMADGILELLPNASVGHIGIYRDP-----------ETLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIK 154 (221)
T ss_dssp EEEEETTHHHHHHHHHHHSTTCEECEEEEEECT-----------TTCCEEEEEEECCCCCTTCEEEEECSEESSSHHHHH
T ss_pred EEEEecchHHHHHHHHHhCCCCcEEEEEEEEcC-----------CCCceeEEEecCCCccCCCEEEEECCccccHHHHHH
Confidence 8999999999999999998 5554333221110 0011111 1111233589999999999999999999
Q ss_pred HHHHHhhcCCcEEEEEEEEecC
Q 029314 143 AIRLLGSFQNHIFILICIQMLN 164 (195)
Q Consensus 143 a~~~L~~~Ga~~V~~~~lv~~~ 164 (195)
+++.|++.|++.+.+++++..+
T Consensus 155 ai~~L~~~G~~~I~~~~lv~~~ 176 (221)
T 1o5o_A 155 AIEILKENGAKKITLVALIAAP 176 (221)
T ss_dssp HHHHHHHTTCCEEEEECSEECH
T ss_pred HHHHHHHcCCCEEEEEEEEeCH
Confidence 9999999999999999987665
No 52
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.11 E-value=3.1e-09 Score=85.26 Aligned_cols=154 Identities=15% Similarity=0.078 Sum_probs=95.6
Q ss_pred CCChHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHh-cCC---------------------CccEE
Q 029314 8 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERY-KDK---------------------NISVV 65 (195)
Q Consensus 8 ~~~~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~-~~~---------------------~~D~I 65 (195)
.+||..+++...+|.-.. +-.. ....+++++..|+... ++. +.-++
T Consensus 6 ~~hp~i~~~lt~lRd~~t---------~~~~---Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~~~g~~~~g~~l~~ 73 (208)
T 2ehj_A 6 VKHPLVKHKLGLMREQDI---------STKR---FRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITV 73 (208)
T ss_dssp CCCHHHHHHHHHHHCSSC---------CHHH---HHHHHHHHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEECSSCCEE
T ss_pred cCCHHHHHHHHHHHCCCC---------ChHH---HHHHHHHHHHHHHHHHHhcCCceEEEEECCCccEEEEEecCCceEE
Confidence 578999999999984321 0011 1234445555555432 110 12278
Q ss_pred EEeCCcchHhHHHHHHHhCCCEE--EEecCCCCCCceeeeeeeecccceeE-EEeecccCCCCEEEEEeeeccchHHHHH
Q 029314 66 AGIEARGFIFGPPIALAIGAKFV--PMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLSA 142 (195)
Q Consensus 66 v~v~~~G~~lA~~la~~l~~p~~--~~rk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~ 142 (195)
|++.++|+.++..+.+.+. +.. .+...+ +. ..++... .......++|++|+||||++.||+|+.+
T Consensus 74 V~ILraG~~~~~~l~~~ip-~~~vg~i~~~r----------d~-~t~~~~~~~~~lp~di~~r~VilvDd~laTG~T~~~ 141 (208)
T 2ehj_A 74 VPILRAGLGMMDGVLENVP-SARISVVGMYR----------NE-ETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIA 141 (208)
T ss_dssp EEBTTGGGGGHHHHHHHCT-TCEECEEEEEE----------CT-TTCCEEEEEEECCSCGGGCEEEEEEEEESSCHHHHH
T ss_pred EEeecCHHHHHHHHHHhCC-cCceeEEEEEE----------cC-CCCceEEEecCCCCccCCCEEEEECCccccHHHHHH
Confidence 9999999999999999875 221 111000 00 0111111 1111223589999999999999999999
Q ss_pred HHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEeecccc
Q 029314 143 AIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTITSEGVD 192 (195)
Q Consensus 143 a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (195)
+++.|++.|++.+.+++++.++. +++.+++. ++.++|.--.+|
T Consensus 142 ai~~L~~~G~~~I~~~~lv~~p~------g~~~l~~~-~p~v~I~t~~iD 184 (208)
T 2ehj_A 142 TIDLLKKAGCSSIKVLVLVAAPE------GIAALEKA-HPDVELYTASID 184 (208)
T ss_dssp HHHHHHHTTCCEEEEEEEEECHH------HHHHHHHH-CTTSEEEESCBC
T ss_pred HHHHHHHcCCCEEEEEEEEeCHH------HHHHHHHH-CCCcEEEEEecC
Confidence 99999999999999999987653 33444332 344455544444
No 53
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.03 E-value=1.5e-08 Score=81.30 Aligned_cols=133 Identities=18% Similarity=0.122 Sum_probs=86.5
Q ss_pred CCChHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHh-cCC---------------------CccEE
Q 029314 8 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERY-KDK---------------------NISVV 65 (195)
Q Consensus 8 ~~~~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~-~~~---------------------~~D~I 65 (195)
.+||..+++-..+|.-.. + -.. ....+++++..|+... ++. +.-++
T Consensus 5 ~~hp~i~~~lt~lRd~~t-~--------~~~---Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~~~~~~~~~~g~~~~~ 72 (208)
T 2e55_A 5 LSHPLIKHKVNTARIQDT-S--------AEK---LRKTLKELGFMLVYEALKDILLEEKEVRTWIGNKRFNYLNEEEIVF 72 (208)
T ss_dssp CCCHHHHHHHHHHHCTTS-C--------HHH---HHHHHHHHHHHHHHHHTTTCCCEEEEEEETTEEEEEEECCGGGEEE
T ss_pred cCCHHHHHHHHHHHCCCC-C--------HHH---HHHHHHHHHHHHHHHHHhhCCCceeEEeCCCCceEeeeecCCcEEE
Confidence 578999999999984321 0 001 1234455565555432 110 12278
Q ss_pred EEeCCcchHhHHHHHHHhCC-CEEEEecCCCCCCceeeeeeeecccceeE-EEeecccCCCCEEEEEeeeccchHHHHHH
Q 029314 66 AGIEARGFIFGPPIALAIGA-KFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLSAA 143 (195)
Q Consensus 66 v~v~~~G~~lA~~la~~l~~-p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a 143 (195)
|++.++|+.++..+.+.+.- ++..+...+ +. +.++... ..... .++|++|+||||++.||+|+.++
T Consensus 73 V~ILraG~~~~~~l~~~lp~~~vg~i~~~r----------d~-~t~~~~~~~~~lp-di~~r~vilvDd~laTG~T~~~a 140 (208)
T 2e55_A 73 VPILRAGLSFLEGALQVVPNAKVGFLGIKR----------NE-ETLESHIYYSRLP-ELKGKIVVILDPMLATGGTLEVA 140 (208)
T ss_dssp EEEETTTHHHHHHHHHHSTTCEECEEEEEE----------CT-TTCCEEEEEEECC-CCBTSEEEEECSEESSSHHHHHH
T ss_pred EEEecchHHHHHHHHHhCCCCcEEEEEEEE----------ec-CCCceEEEecCCC-CCCCCEEEEECCccccHHHHHHH
Confidence 99999999999999998861 111111000 00 0111111 11223 45899999999999999999999
Q ss_pred HHHHhhcCCcEEEEEEEEecC
Q 029314 144 IRLLGSFQNHIFILICIQMLN 164 (195)
Q Consensus 144 ~~~L~~~Ga~~V~~~~lv~~~ 164 (195)
++.|++.|++.+.+++++.++
T Consensus 141 i~~L~~~G~~~I~~~~lv~~~ 161 (208)
T 2e55_A 141 LREILKHSPLKVKSVHAIAAP 161 (208)
T ss_dssp HHHHHTTCBSEEEEEEEEECH
T ss_pred HHHHHHcCCCEEEEEEEEECH
Confidence 999999999999999998765
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.01 E-value=3.8e-09 Score=84.78 Aligned_cols=134 Identities=18% Similarity=0.142 Sum_probs=85.2
Q ss_pred CCChHHHHHhhcccccCCCCCCCceEEechhhhcCHHHHHHHHHHHHHHh-cCC---------------------CccEE
Q 029314 8 AQDPRIAGISSAIRVIPDFPKPGIMFQDITTLLLDTKAFRDTIDLFVERY-KDK---------------------NISVV 65 (195)
Q Consensus 8 ~~~~~~~~l~~~~r~~~~~p~~g~~~~d~~~i~~~p~~~~~l~~~la~~~-~~~---------------------~~D~I 65 (195)
.+||..+++...+|.-.. + -.. ....+++++..|+... ++. +.-++
T Consensus 6 ~~~p~i~~~lt~lRd~~t-~--------~~~---Fr~~~~~l~~ll~~ea~~~l~~~~~~v~TP~g~~~g~~~~g~~l~~ 73 (208)
T 1v9s_A 6 VDHPLVQHKLAHLRDKRT-G--------PKD---FRELAEEVAMLMAYEAMRDLELEETTVETPIAPARVKVLSGKKLAL 73 (208)
T ss_dssp CCCHHHHHHHHHHHSTTC-C--------HHH---HHHHHHHHHHHHHHHHTTTCCEEEEEEECSSSEEEEEEECSSCCEE
T ss_pred cCCHHHHHHHHHHHCCCC-C--------HHH---HHHHHHHHHHHHHHHHHccCCCeEEEEECCCceEEEEEecCCceEE
Confidence 678999999999984321 0 011 1234445555555432 110 12278
Q ss_pred EEeCCcchHhHHHHHHHhC-CCEEEEecCCCCCCceeeeeeeecccceeE-EEeecccCCCCEEEEEeeeccchHHHHHH
Q 029314 66 AGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLSAA 143 (195)
Q Consensus 66 v~v~~~G~~lA~~la~~l~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~a 143 (195)
|++.++|+.++..+.+.+. .++-.+.-.+. . ..++... .......++|++|+||||++.||+|+.++
T Consensus 74 V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd----------~-~t~~~~~~~~~lp~di~~r~vilvDd~laTG~T~~~a 142 (208)
T 1v9s_A 74 VAILRAGLVMVEGILKLVPHARVGHIGLYRD----------P-ESLNPVQYYIKLPPDIAERRAFLLDPMLATGGSASLA 142 (208)
T ss_dssp EEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHHHHH
T ss_pred EEeccchHHHHHHHHHhCCCCeeeEEEEEEc----------C-CCCCceEEeccCCCccCCCEEEEECCccccHHHHHHH
Confidence 9999999999999998875 11211111110 0 0011111 11112235899999999999999999999
Q ss_pred HHHHhhcCCcEEEEEEEEecC
Q 029314 144 IRLLGSFQNHIFILICIQMLN 164 (195)
Q Consensus 144 ~~~L~~~Ga~~V~~~~lv~~~ 164 (195)
++.|++.|++.+.+++++.++
T Consensus 143 i~~L~~~G~~~I~~~~lv~~~ 163 (208)
T 1v9s_A 143 LSLLKERGATGVKLMAILAAP 163 (208)
T ss_dssp HHHHHHTTCCSCEEEEEEECH
T ss_pred HHHHHHcCCCEEEEEEEEeCH
Confidence 999999999999999998765
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=98.80 E-value=2e-08 Score=82.26 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=63.5
Q ss_pred EEEEeCCcchHhHHHHHHHhC-CCEEEEecCCCCCCceeeeeeeecccceeE-EEeecccCCCCEEEEEeeeccchHHHH
Q 029314 64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGERALIVDDLVATGGTLS 141 (195)
Q Consensus 64 ~Iv~v~~~G~~lA~~la~~l~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gk~VLLVDDV~tTG~Tl~ 141 (195)
++|++.++|+.++..+.+.+. .++-.+.-.+ +. ..++... .......+.|++|+||||++.||+|+.
T Consensus 105 ~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~R----------d~-~t~~~~~~~~~lp~di~~r~VilvDdmlaTG~T~~ 173 (243)
T 1bd3_D 105 CGVSIVRAGESMESGLRAVCRGVRIGKILIQR----------DE-TTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVC 173 (243)
T ss_dssp EEEEEETTTHHHHHHHHHHSTTCCEEEEEEEE----------CS-SSCCEEEEEEECCTTGGGSEEEEECSEESSCHHHH
T ss_pred EEEEEEcchHHHHHHHHHhCCcCeeeeEEEEE----------cC-CCCCeEEEeccCCcccCCCEEEEECCccccHHHHH
Confidence 688899999999999999875 2221111000 00 0111111 112122358999999999999999999
Q ss_pred HHHHHHhhcCC--cEEEEEEEEecC
Q 029314 142 AAIRLLGSFQN--HIFILICIQMLN 164 (195)
Q Consensus 142 ~a~~~L~~~Ga--~~V~~~~lv~~~ 164 (195)
++++.|++.|+ +.+.+++++..+
T Consensus 174 ~ai~~L~~~G~~p~~I~~~~lvaap 198 (243)
T 1bd3_D 174 KAIEVLLRLGVKEERIIFVNILAAP 198 (243)
T ss_dssp HHHHHHHHHTCCGGGEEEEEEEECH
T ss_pred HHHHHHHHcCCCcceEEEEEEEeCH
Confidence 99999999999 899999998665
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.72 E-value=3.7e-08 Score=79.43 Aligned_cols=110 Identities=11% Similarity=0.085 Sum_probs=71.4
Q ss_pred EEEEeCCcchHhHHHHHHHhC-CCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHHHHH
Q 029314 64 VVAGIEARGFIFGPPIALAIG-AKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSA 142 (195)
Q Consensus 64 ~Iv~v~~~G~~lA~~la~~l~-~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~Tl~~ 142 (195)
++|++.++|.+++..+.+.+. .++-.+-..+. . . + .........+ .+.|++|+||||++.||+|+.+
T Consensus 80 ~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd-~-~--------t-~p~~~~~~lP-~i~~~~VilvD~~laTG~T~~~ 147 (217)
T 3dmp_A 80 AIVPVLRAGVGMSDGLLELIPSARVGHIGVYRA-D-D--------H-RPVEYLVRLP-DLEDRIFILCDPMVATGYSAAH 147 (217)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTSEECEEECSCC-C-S--------S-SCCCSEEECC-CCTTCEEEEECSEESSSHHHHH
T ss_pred EEEEecccchHHHHHHHHhCcCCceeEEEEEEC-C-C--------C-CcEEEeecCC-CCCCCEEEEEcCcccccHHHHH
Confidence 678889999999999999984 33322211110 0 0 0 0000111123 3589999999999999999999
Q ss_pred HHHHHhhcCC--cEEEEEEEEecCccCchhHHHHhhhhcCceeeEEeecccc
Q 029314 143 AIRLLGSFQN--HIFILICIQMLNACFSSYILLFSYATNGFTQFTITSEGVD 192 (195)
Q Consensus 143 a~~~L~~~Ga--~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (195)
+++.|++.|+ +.+.+++++..+ .+.+.+.+. |+.++|---.+|
T Consensus 148 ai~~L~~~G~pe~~I~~~~~vaa~------egl~~l~~~-~P~v~i~ta~iD 192 (217)
T 3dmp_A 148 AIDVLKRRGVPGERLMFLALVAAP------EGVQVFQDA-HPDVKLYVASLD 192 (217)
T ss_dssp HHHHHHTTTCCGGGEEEECSEECH------HHHHHHHHH-CTTCEEEESEEC
T ss_pred HHHHHHHcCCCcCeEEEEEEEeCH------HHHHHHHHH-CCCCEEEEEEec
Confidence 9999999999 888888887544 233333332 445555444443
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.50 E-value=5.5e-07 Score=72.50 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=70.7
Q ss_pred EEEEeCCcchHhHHHHHHHhC-CCEEE--E-ecCCCCCCceeeeeeeecccceeE-EEeecccCCCC--EEEEEeeeccc
Q 029314 64 VVAGIEARGFIFGPPIALAIG-AKFVP--M-RKPKKLPGEVISEEYSLEYGKDVM-EMHVGAVQAGE--RALIVDDLVAT 136 (195)
Q Consensus 64 ~Iv~v~~~G~~lA~~la~~l~-~p~~~--~-rk~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Gk--~VLLVDDV~tT 136 (195)
++|++.++|.+++..+.+.+. .++.. + |...+.... . ...+... ....+ .+.++ +|+||||++.|
T Consensus 74 ~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~--~-----~~~~p~~~y~klP-~i~~~~~~VilvDp~laT 145 (216)
T 1xtt_A 74 VIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEV--P-----KDMDVYIYYKKIP-DIRAKVDNVIIADPMIAT 145 (216)
T ss_dssp EEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSC--C-----SCCCEEEEEEECC-CCCTTTCEEEEECSEESS
T ss_pred EEEeecCCcHHHHHHHHHHcccCccceEEEEECCCccccc--c-----cccCceEeeccCC-CccCCcceEEEEcCCccc
Confidence 688899999999999999874 23321 1 221110000 0 0001111 11223 45888 99999999999
Q ss_pred hHHHHHHHHHHhhcCC-cEEEEEEEEecCccCchhHHHHhhhhcCceeeEEeecccc
Q 029314 137 GGTLSAAIRLLGSFQN-HIFILICIQMLNACFSSYILLFSYATNGFTQFTITSEGVD 192 (195)
Q Consensus 137 G~Tl~~a~~~L~~~Ga-~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (195)
|+|+.++++.|++ |+ +.+.+++++..+ .+.+.+.+. |+.++|---.+|
T Consensus 146 G~T~~~ai~~L~~-G~p~~I~~~~~vaa~------~gl~~l~~~-~P~v~I~ta~iD 194 (216)
T 1xtt_A 146 ASTMLKVLEEVVK-ANPKRIYIVSIISSE------YGVNKILSK-YPFIYLFTVAID 194 (216)
T ss_dssp SHHHHHHHHHHGG-GCCSEEEEECSEEEH------HHHHHHHHH-CTTSEEEESEEE
T ss_pred hHHHHHHHHHHHh-CCCCeEEEEEEecCH------HHHHHHHHH-CCCcEEEEEEec
Confidence 9999999999999 99 888888887543 244444332 455555544444
No 58
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=72.70 E-value=20 Score=29.14 Aligned_cols=71 Identities=7% Similarity=-0.005 Sum_probs=45.5
Q ss_pred chHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccc-hH--HHHHHHHHHh
Q 029314 72 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT-GG--TLSAAIRLLG 148 (195)
Q Consensus 72 G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tT-G~--Tl~~a~~~L~ 148 (195)
--.+|..+|+.+|+|+..+..++ +..|+..+++ .+.++|+.|.|+-..... -. -+.-+++.|+
T Consensus 9 ~~~la~~ia~~l~~~l~~~~~~~------------F~dGE~~v~i--~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~ 74 (284)
T 1u9y_A 9 SQNLAFKVAKLLNTKLTRVEYKR------------FPDNEIYVRI--VDEINDDEAVIINTQKNQNDAIVETILLCDALR 74 (284)
T ss_dssp CHHHHHHHHHHTTCCEECEEEEE------------CTTCCEEEEE--CSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCeeeeeEEEE------------CCCCCEEEEe--CCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 34799999999999986433221 1223333333 334589999999876542 22 2334678899
Q ss_pred hcCCcEEE
Q 029314 149 SFQNHIFI 156 (195)
Q Consensus 149 ~~Ga~~V~ 156 (195)
.++|+.+.
T Consensus 75 ~~~a~~i~ 82 (284)
T 1u9y_A 75 DEGVKKIT 82 (284)
T ss_dssp TTTCCEEE
T ss_pred HcCCceEE
Confidence 99998754
No 59
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=71.72 E-value=30 Score=28.74 Aligned_cols=73 Identities=10% Similarity=0.104 Sum_probs=46.7
Q ss_pred CcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccchHH----HHHHHH
Q 029314 70 ARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGT----LSAAIR 145 (195)
Q Consensus 70 ~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG~T----l~~a~~ 145 (195)
...-.+|..+|..||+|+..+..++ +..|+..+++ ..-++|+.|.||-.....-+. +.-+++
T Consensus 14 ~~~~~La~~ia~~lg~~l~~~~~~~------------F~dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~id 79 (319)
T 3dah_A 14 NANPALAQEVVKILGIPLGKAMVSR------------FSDGEIQVEI--QENVRGKDVFVLQSTCAPTNDNLMELMIMVD 79 (319)
T ss_dssp SSCHHHHHHHHHHHTSCCCCEEEEE------------CTTSCEEEEE--CSCCBTCEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCceeeeEEEE------------CCCCCEEEEE--CCCcCCCeEEEEccCCCCCcHHHHHHHHHHH
Confidence 3445899999999999875332211 1223333333 334589999999776543221 445778
Q ss_pred HHhhcCCcEEE
Q 029314 146 LLGSFQNHIFI 156 (195)
Q Consensus 146 ~L~~~Ga~~V~ 156 (195)
.|+.+||+.+.
T Consensus 80 A~k~asA~rIt 90 (319)
T 3dah_A 80 ALKRASAGRIT 90 (319)
T ss_dssp HHHHTTBSEEE
T ss_pred HHHHcCCcEEE
Confidence 89999998865
No 60
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=66.34 E-value=6.8 Score=28.08 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=20.8
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
++-|||||||=-+.-. ...+.|++.|...+.
T Consensus 11 k~~rILiVDD~~~~r~---~l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 11 KNMKILIVDDFSTMRR---IVKNLLRDLGFNNTQ 41 (134)
T ss_dssp TTCCEEEECSCHHHHH---HHHHHHHHTTCCCEE
T ss_pred CCCEEEEEeCCHHHHH---HHHHHHHHcCCcEEE
Confidence 5568999999654443 345667788876544
No 61
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=60.11 E-value=42 Score=27.99 Aligned_cols=72 Identities=17% Similarity=0.119 Sum_probs=44.7
Q ss_pred chHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccc--hH--HHHHHHHHH
Q 029314 72 GFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GG--TLSAAIRLL 147 (195)
Q Consensus 72 G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tT--G~--Tl~~a~~~L 147 (195)
.-.+|..+|+.||+|+..+..++ +..|+..+++ .+-++|+.|.||-..... -. -+.-+++.+
T Consensus 12 ~~~La~~ia~~lg~~l~~~~~~~------------F~dGE~~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~ 77 (326)
T 3s5j_B 12 HQDLSQKIADRLGLELGKVVTKK------------FSNQETCVEI--GESVRGEDVYIVQSGCGEINDNLMELLIMINAC 77 (326)
T ss_dssp CCHHHHHHHHHTTCCCCCEEEEE------------CTTSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCceeeeEEeE------------CCCCCEEEEE--CCCcCCCcEEEEecCCCCccHHHHHHHHHHHHH
Confidence 34799999999999875332111 1223333333 334699999999764432 11 233467788
Q ss_pred hhcCCcEEEE
Q 029314 148 GSFQNHIFIL 157 (195)
Q Consensus 148 ~~~Ga~~V~~ 157 (195)
+.++|+.+.+
T Consensus 78 k~asA~rIt~ 87 (326)
T 3s5j_B 78 KIASASRVTA 87 (326)
T ss_dssp HHTTCSEEEE
T ss_pred HhcCCcEEEE
Confidence 9999998754
No 62
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=57.17 E-value=26 Score=28.63 Aligned_cols=69 Identities=7% Similarity=0.022 Sum_probs=42.3
Q ss_pred hHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccch-H-H--HHHHHHHHh
Q 029314 73 FIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG-G-T--LSAAIRLLG 148 (195)
Q Consensus 73 ~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG-~-T--l~~a~~~L~ 148 (195)
-.+|..+|+.+|+|+..+..++ +..|+..+++. + . |+.|.||--....- . - +.-+++.|+
T Consensus 10 ~~la~~ia~~lg~~l~~~~~~~------------F~dGE~~v~i~--e-~-g~dV~iiqs~~~p~nd~lmeLl~~ida~k 73 (286)
T 3lrt_A 10 LKLAARIAEELKTEPVMPDERR------------FPDGELYLRYD--E-D-LTGHNIFIIGNTHSDAEVMEMILTLSAIQ 73 (286)
T ss_dssp HHHHHHHHHHTTSCEECCEEEE------------CTTSCEEEECC--S-C-CTTSEEEEECCCCSHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCeeeeEEEE------------CCCCCEEEEEc--C-C-CCcEEEEEeCCCCCcHHHHHHHHHHHHHH
Confidence 4799999999999985332111 12233333332 2 2 88899887654321 2 2 344778899
Q ss_pred hcCCcEEEE
Q 029314 149 SFQNHIFIL 157 (195)
Q Consensus 149 ~~Ga~~V~~ 157 (195)
.+||+.+.+
T Consensus 74 ~~~A~~it~ 82 (286)
T 3lrt_A 74 DYRTKSVNI 82 (286)
T ss_dssp GSCCSEEEE
T ss_pred HcCCCEEEE
Confidence 999987643
No 63
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=50.12 E-value=22 Score=23.52 Aligned_cols=52 Identities=13% Similarity=0.172 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhcCCcEEEEEEEEecCccCch--hHHHHhhhhcCceeeEEeecc
Q 029314 139 TLSAAIRLLGSFQNHIFILICIQMLNACFSS--YILLFSYATNGFTQFTITSEG 190 (195)
Q Consensus 139 Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 190 (195)
-+.+.++.+++.|++.+.+..-++....-+. ..+.+..++.|+..+|.|=-|
T Consensus 32 vlnelmdyikkqgakrvrisitartkkeaekfaailikvfaelgyndinvtfdg 85 (106)
T 1qys_A 32 VLNELMDYIKKQGAKRVRISITARTKKEAEKFAAILIKVFAELGYNDINVTFDG 85 (106)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHHHHhcCCcEEEEEEEecchhHHHHHHHHHHHHHHHhCCcceeEEEcC
Confidence 4566778889999999887655432222222 345788999999988877443
No 64
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=49.86 E-value=26 Score=23.17 Aligned_cols=27 Identities=19% Similarity=0.051 Sum_probs=14.5
Q ss_pred CCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 124 GERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 124 Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
+++||||||=-.. .....+.|++.|..
T Consensus 2 ~~~ilivdd~~~~---~~~l~~~L~~~g~~ 28 (120)
T 3f6p_A 2 DKKILVVDDEKPI---ADILEFNLRKEGYE 28 (120)
T ss_dssp CCEEEEECSCHHH---HHHHHHHHHHTTCE
T ss_pred CCeEEEEECCHHH---HHHHHHHHHhCCEE
Confidence 3578888874333 33334455555544
No 65
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=48.42 E-value=28 Score=23.13 Aligned_cols=27 Identities=19% Similarity=0.123 Sum_probs=14.9
Q ss_pred CEEEEEeeeccchHHHHHHHHHHhhcCCcE
Q 029314 125 ERALIVDDLVATGGTLSAAIRLLGSFQNHI 154 (195)
Q Consensus 125 k~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~ 154 (195)
++||||||=-.. .....+.|++.|..+
T Consensus 3 ~~ILivdd~~~~---~~~l~~~l~~~g~~v 29 (122)
T 3gl9_A 3 KKVLLVDDSAVL---RKIVSFNLKKEGYEV 29 (122)
T ss_dssp CEEEEECSCHHH---HHHHHHHHHHTTCEE
T ss_pred ceEEEEeCCHHH---HHHHHHHHHHCCcEE
Confidence 578888874332 333445555566543
No 66
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=47.80 E-value=30 Score=22.99 Aligned_cols=29 Identities=24% Similarity=0.226 Sum_probs=18.8
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCcE
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNHI 154 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~ 154 (195)
++++||||||=-... ....+.|++.|..+
T Consensus 6 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~v 34 (130)
T 3eod_A 6 VGKQILIVEDEQVFR---SLLDSWFSSLGATT 34 (130)
T ss_dssp TTCEEEEECSCHHHH---HHHHHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHHH---HHHHHHHHhCCceE
Confidence 677899999855443 34455566677654
No 67
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=46.82 E-value=62 Score=27.41 Aligned_cols=70 Identities=10% Similarity=0.039 Sum_probs=43.7
Q ss_pred hHhHHH---HHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccc--hHH--HHHHHH
Q 029314 73 FIFGPP---IALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVAT--GGT--LSAAIR 145 (195)
Q Consensus 73 ~~lA~~---la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tT--G~T--l~~a~~ 145 (195)
-.+|.. +|..||+|+..+..++ +..|+..+++ ..-++|+.|.||-..... ..- +.-+++
T Consensus 39 ~~la~~~~~ia~~lg~~l~~~~~~~------------F~dGE~~v~i--~esvrg~dV~iiqs~~~~~nd~lmeLl~~id 104 (379)
T 2ji4_A 39 SSCMELSKKIAERLGVEMGKVQVYQ------------EPNRETRVQI--QESVRGKDVFIIQTVSKDVNTTIMELLIMVY 104 (379)
T ss_dssp GGGGHHHHHHHHHHTCCCCCEEEEE------------CTTSCEEEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhCCceEeeEEEE------------CCCCCEEEEe--CCCcCCCEEEEEeCCCCCccHHHHHHHHHHH
Confidence 467777 9999999875332111 1223333333 334599999999886531 222 334667
Q ss_pred HHhhcCCcEEE
Q 029314 146 LLGSFQNHIFI 156 (195)
Q Consensus 146 ~L~~~Ga~~V~ 156 (195)
.|+.++|+.+.
T Consensus 105 A~k~asA~rit 115 (379)
T 2ji4_A 105 ACKTSCAKSII 115 (379)
T ss_dssp HHHHTTCSEEE
T ss_pred HHHhcCCceEE
Confidence 88999999865
No 68
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=43.46 E-value=34 Score=23.25 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=14.5
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
++.+||||||=-..- ....+.|++.|..
T Consensus 4 ~~~~ilivdd~~~~~---~~l~~~L~~~g~~ 31 (140)
T 3h5i_A 4 KDKKILIVEDSKFQA---KTIANILNKYGYT 31 (140)
T ss_dssp --CEEEEECSCHHHH---HHHHHHHHHTTCE
T ss_pred CCcEEEEEeCCHHHH---HHHHHHHHHcCCE
Confidence 456788888744333 3334445555543
No 69
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=43.46 E-value=38 Score=25.18 Aligned_cols=28 Identities=29% Similarity=0.328 Sum_probs=18.0
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
..+.+||||||=-..- ....++|++.|.
T Consensus 59 ~~~~~ILiVdDd~~~~---~~l~~~L~~~g~ 86 (206)
T 3mm4_A 59 LRGKRVLVVDDNFISR---KVATGKLKKMGV 86 (206)
T ss_dssp TTTCEEEEECSCHHHH---HHHHHHHHHTTC
T ss_pred cCCCEEEEEeCCHHHH---HHHHHHHHHcCC
Confidence 4778999999954333 334455556665
No 70
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=43.36 E-value=22 Score=23.25 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=30.3
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcE
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHI 154 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~ 154 (195)
+..|.+++=|+..-.+|.|..++.++|++.|-++
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V 74 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVV 74 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEE
Confidence 5689999999999999999999999999777654
No 71
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=42.67 E-value=1.4e+02 Score=24.46 Aligned_cols=76 Identities=11% Similarity=0.085 Sum_probs=46.2
Q ss_pred CCcchHhHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEeecccCCCCEEEEEeeeccch--H--HHHHHH
Q 029314 69 EARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATG--G--TLSAAI 144 (195)
Q Consensus 69 ~~~G~~lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gk~VLLVDDV~tTG--~--Tl~~a~ 144 (195)
-..--.+|..+|+.+|+|+..+..++ +..|+..+.+ ...++|+.|.||-.....- . -+.-++
T Consensus 15 ~~~~~~la~~ia~~lg~~l~~~~~~~------------F~dGE~~v~i--~e~vrg~dv~iiqs~~~~~nd~lmell~~~ 80 (317)
T 1dku_A 15 LNSNPELAKEIADIVGVQLGKCSVTR------------FSDGEVQINI--EESIRGCDCYIIQSTSDPVNEHIMELLIMV 80 (317)
T ss_dssp CSSCHHHHHHHHHHHTCCCCCEEEEE------------CTTSCEEEEE--CSCCTTCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCeeEeeEEEE------------CCCCCEEEEe--cCCCCCCEEEEEcCCCCCCcHHHHHHHHHH
Confidence 34445899999999999875432211 1223323333 3345899999987754321 1 233456
Q ss_pred HHHhhcCCcEEEEE
Q 029314 145 RLLGSFQNHIFILI 158 (195)
Q Consensus 145 ~~L~~~Ga~~V~~~ 158 (195)
..++.++++.+.++
T Consensus 81 ~a~~~~~a~~i~av 94 (317)
T 1dku_A 81 DALKRASAKTINIV 94 (317)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHhhccCcceEEEE
Confidence 77788888876543
No 72
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=40.17 E-value=51 Score=21.34 Aligned_cols=28 Identities=29% Similarity=0.350 Sum_probs=15.1
Q ss_pred CCEEEEEeeeccchHHHHHHHHHHhhcCCcE
Q 029314 124 GERALIVDDLVATGGTLSAAIRLLGSFQNHI 154 (195)
Q Consensus 124 Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~ 154 (195)
+.+||||||=-.....+ .+.|+..|..+
T Consensus 2 ~~~ilivdd~~~~~~~l---~~~l~~~g~~v 29 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMML---KDIITKAGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CceEEEEcCcHHHHHHH---HHHHhhcCcEE
Confidence 35788888754433333 34444556543
No 73
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=39.37 E-value=44 Score=22.13 Aligned_cols=28 Identities=29% Similarity=0.277 Sum_probs=14.4
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
++.+||||||=-..... ..+.|++.|..
T Consensus 5 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~ 32 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAA---IERVLKRDHWQ 32 (132)
T ss_dssp --CEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCccEEEEECCHHHHHH---HHHHHHHCCcE
Confidence 45678888874443333 34445555543
No 74
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=38.45 E-value=23 Score=27.59 Aligned_cols=33 Identities=9% Similarity=-0.100 Sum_probs=23.7
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
.+.|++||||||--+ ......+.|...|.++..
T Consensus 8 ~l~~~~vlvv~d~~~---~~~~l~~~L~~~g~~v~~ 40 (254)
T 2ayx_A 8 GLSGKRCWLAVRNAS---LCQFLETSLQRSGIVVTT 40 (254)
T ss_dssp TTTTEEEEEECCCHH---HHHHHHHHHTTTTEEEEE
T ss_pred ccCCCEEEEEcCCHH---HHHHHHHHHHHCCCEEEE
Confidence 358999999999544 344456777888876644
No 75
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=36.54 E-value=60 Score=21.66 Aligned_cols=28 Identities=18% Similarity=0.166 Sum_probs=17.3
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
++.+||||||=-.....+ .+.|+..|..
T Consensus 6 ~~~~ILivdd~~~~~~~l---~~~L~~~g~~ 33 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVT---KGLLVHLGCE 33 (136)
T ss_dssp TTCEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCCeEEEEeCCHHHHHHH---HHHHHHcCCe
Confidence 577899999965544443 3444555554
No 76
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=36.51 E-value=49 Score=27.75 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 43 TKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 43 p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
.+.+..+...+.+.+.+.+||+|+........++...|...++|++..
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 344444555555566667899999987665666666778899998654
No 77
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=36.37 E-value=81 Score=24.63 Aligned_cols=47 Identities=15% Similarity=0.258 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHH---HHHhcCCCccEEEEe-CCcch--------HhHHHHHHHhCCCEE
Q 029314 42 DTKAFRDTIDLF---VERYKDKNISVVAGI-EARGF--------IFGPPIALAIGAKFV 88 (195)
Q Consensus 42 ~p~~~~~l~~~l---a~~~~~~~~D~Iv~v-~~~G~--------~lA~~la~~l~~p~~ 88 (195)
+++.+..+...+ ++.+.+.++|+|+-. ...++ .+...|....++|++
T Consensus 44 t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~ 102 (240)
T 3ixl_A 44 TPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCT 102 (240)
T ss_dssp SHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEE
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEE
Confidence 466665554333 334444578877664 44344 466777777788865
No 78
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=36.34 E-value=60 Score=20.51 Aligned_cols=10 Identities=10% Similarity=0.245 Sum_probs=5.9
Q ss_pred CEEEEEeeec
Q 029314 125 ERALIVDDLV 134 (195)
Q Consensus 125 k~VLLVDDV~ 134 (195)
++||||||=-
T Consensus 2 ~~iliv~~~~ 11 (119)
T 2j48_A 2 GHILLLEEED 11 (119)
T ss_dssp CEEEEECCCH
T ss_pred CEEEEEeCCH
Confidence 4566666643
No 79
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=35.83 E-value=45 Score=22.82 Aligned_cols=28 Identities=29% Similarity=0.271 Sum_probs=13.6
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
++.+||||||=-... ....+.|++.|..
T Consensus 13 ~~~~iLivdd~~~~~---~~l~~~L~~~g~~ 40 (143)
T 3m6m_D 13 RSMRMLVADDHEANR---MVLQRLLEKAGHK 40 (143)
T ss_dssp --CEEEEECSSHHHH---HHHHHHHHC--CE
T ss_pred ccceEEEEeCCHHHH---HHHHHHHHHcCCe
Confidence 556788888854333 3334445555544
No 80
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.65 E-value=55 Score=22.65 Aligned_cols=28 Identities=18% Similarity=0.151 Sum_probs=15.0
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
++.+||||||=-.. .....+.|++.|..
T Consensus 6 ~~~~ILivdd~~~~---~~~l~~~L~~~g~~ 33 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ---AEHLKHILEETGYQ 33 (154)
T ss_dssp -CCEEEEECSCHHH---HHHHHHHHHTTTCE
T ss_pred CCCcEEEEeCCHHH---HHHHHHHHHHCCCE
Confidence 35578888884433 33344445555543
No 81
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=35.62 E-value=89 Score=25.49 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEe
Q 029314 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (195)
Q Consensus 50 ~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~r 91 (195)
...+.+.+.++++|+|+. ..--...+..+|+.+++|++...
T Consensus 107 ~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 107 LRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 345555667778999984 31122346677899999987643
No 82
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=35.49 E-value=99 Score=24.88 Aligned_cols=40 Identities=20% Similarity=0.068 Sum_probs=27.5
Q ss_pred HHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 50 ~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
...+.+.+.++++|+|+.-. .....+..+|+.+++|++..
T Consensus 91 ~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVYDV-FPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp HHHHHHHHTTCCCSEEEEES-TTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhccCCCEEEECc-hHHHHHHHHHHhhCCCEEEE
Confidence 34455566677899998731 22345677789999998765
No 83
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=35.36 E-value=61 Score=20.36 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=24.8
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
.+++.|+++.+ +|.....++..|++.|-+.+.
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~ 70 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVE 70 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEE
Confidence 36778888864 688888889999999986544
No 84
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=34.60 E-value=38 Score=22.57 Aligned_cols=32 Identities=16% Similarity=0.073 Sum_probs=25.6
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
.+++.|+++++ +|.....++..|++.|-+.|.
T Consensus 50 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 81 (106)
T 3hix_A 50 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 81 (106)
T ss_dssp CTTSCEEEECS---SHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEEC---CCChHHHHHHHHHHcCCcCEE
Confidence 46778888864 788888999999999987543
No 85
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=34.30 E-value=44 Score=22.24 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=15.0
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
.+.+||||||=-.... ...+.|++.|..
T Consensus 4 ~~~~iLivdd~~~~~~---~l~~~L~~~g~~ 31 (129)
T 3h1g_A 4 GSMKLLVVDDSSTMRR---IIKNTLSRLGYE 31 (129)
T ss_dssp --CCEEEECSCHHHHH---HHHHHHHHTTCC
T ss_pred CCcEEEEEeCCHHHHH---HHHHHHHHcCCc
Confidence 3457888888544333 334455556654
No 86
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=33.90 E-value=14 Score=29.19 Aligned_cols=19 Identities=32% Similarity=0.295 Sum_probs=13.7
Q ss_pred eeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 131 DDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 131 DDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
=|++.||+||+ +.|-+++.
T Consensus 147 vDivsTG~TLr-------aNgL~~ie 165 (219)
T 1o63_A 147 VDITETGRTLK-------ENNLEILD 165 (219)
T ss_dssp EEEESSSHHHH-------HTTEEEEE
T ss_pred EEeeccHHHHH-------HCCCEEee
Confidence 38999999964 55666654
No 87
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=33.87 E-value=64 Score=21.43 Aligned_cols=30 Identities=30% Similarity=0.173 Sum_probs=17.0
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCcEE
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
...+||||||=-.... ...+.|++.|..++
T Consensus 6 ~~~~ilivdd~~~~~~---~l~~~L~~~g~~v~ 35 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNRE---ALILYLKSRGIDAV 35 (136)
T ss_dssp -CCEEEEECSCHHHHH---HHHHHHHHTTCCEE
T ss_pred CCCeEEEECCCHHHHH---HHHHHHHHcCceEE
Confidence 3567888888554433 34455555565543
No 88
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=33.16 E-value=15 Score=28.77 Aligned_cols=25 Identities=28% Similarity=0.194 Sum_probs=17.3
Q ss_pred eeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 132 DLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 132 DV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
|++.||+|| +++|-+++. .+++.+.
T Consensus 153 DivsTG~TL-------raNgL~~ie--~I~~ssA 177 (206)
T 1ve4_A 153 DVVQTGATL-------RAAGLVEVE--VLAHSTA 177 (206)
T ss_dssp EEESSSHHH-------HHTTCEEEE--EEEEECE
T ss_pred EeccCHHHH-------HHCCCEEeE--EEEeeEE
Confidence 799999995 556777775 4444443
No 89
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=32.83 E-value=84 Score=20.40 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=24.6
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
+.+++.|++.. .+|.....++..|++.|-
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~ 81 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQNGV 81 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHCCC
Confidence 34678899886 789989999999999998
No 90
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.35 E-value=74 Score=21.38 Aligned_cols=27 Identities=22% Similarity=0.074 Sum_probs=14.5
Q ss_pred CCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 124 GERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 124 Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
..+||||||=-..... ..+.|++.|..
T Consensus 4 ~~~iLivdd~~~~~~~---l~~~L~~~g~~ 30 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEM---LELVLRGAGYE 30 (136)
T ss_dssp CCEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCEEEEEeCCHHHHHH---HHHHHHHCCCE
Confidence 4578888875443333 33444555543
No 91
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=32.05 E-value=1.1e+02 Score=25.10 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=27.8
Q ss_pred HHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 50 ~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
...+.+.+++.++|+||.-.. +..+..+|+.+|+|.+..
T Consensus 98 ~~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~ 136 (424)
T 2iya_A 98 LPQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQL 136 (424)
T ss_dssp HHHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEE
Confidence 344555556678999998653 346778899999998754
No 92
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=32.04 E-value=66 Score=22.28 Aligned_cols=30 Identities=30% Similarity=0.245 Sum_probs=19.5
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCcEE
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
...+||||||=-. ......+.|++.|..++
T Consensus 35 ~~~~Ilivdd~~~---~~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 35 IPFNVLIVDDSVF---TVKQLTQIFTSEGFNII 64 (157)
T ss_dssp EECEEEEECSCHH---HHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEeCCHH---HHHHHHHHHHhCCCeEE
Confidence 3458999999543 44445566677776654
No 93
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=32.00 E-value=63 Score=25.89 Aligned_cols=32 Identities=34% Similarity=0.381 Sum_probs=27.3
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFIL 157 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~ 157 (195)
.+|+++|| +-+|++.++++-.|.+.|+..+.+
T Consensus 123 ~~~~~~li----lGaGGaarai~~aL~~~g~~~i~i 154 (269)
T 3tum_A 123 PAGKRALV----IGCGGVGSAIAYALAEAGIASITL 154 (269)
T ss_dssp CTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cccCeEEE----EecHHHHHHHHHHHHHhCCCeEEE
Confidence 48899986 589999999999999999886543
No 94
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=31.90 E-value=70 Score=26.26 Aligned_cols=36 Identities=11% Similarity=0.049 Sum_probs=29.0
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecC
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLN 164 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~ 164 (195)
++|+++||+ -+|++-++++..|.+.|++.+. ++++.
T Consensus 146 l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~---v~nRt 181 (312)
T 3t4e_A 146 MRGKTMVLL----GAGGAATAIGAQAAIEGIKEIK---LFNRK 181 (312)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEE---EEECS
T ss_pred cCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEE---EEECC
Confidence 579999976 5799999999999999997653 34555
No 95
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=31.81 E-value=75 Score=21.21 Aligned_cols=28 Identities=18% Similarity=0.011 Sum_probs=16.0
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
+..+||||||=-.... ...+.|++.|..
T Consensus 5 ~~~~iLivdd~~~~~~---~l~~~l~~~g~~ 32 (140)
T 3grc_A 5 PRPRILICEDDPDIAR---LLNLMLEKGGFD 32 (140)
T ss_dssp CCSEEEEECSCHHHHH---HHHHHHHHTTCE
T ss_pred CCCCEEEEcCCHHHHH---HHHHHHHHCCCe
Confidence 3467888888544333 344555556654
No 96
>1z7m_E ATP phosphoribosyltransferase; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: c.94.1.1 PDB: 1z7n_E*
Probab=31.40 E-value=13 Score=29.04 Aligned_cols=25 Identities=28% Similarity=0.345 Sum_probs=18.2
Q ss_pred eeccchHHHHHHHHHHhhcCCcEEEEEEEEecCc
Q 029314 132 DLVATGGTLSAAIRLLGSFQNHIFILICIQMLNA 165 (195)
Q Consensus 132 DV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~ 165 (195)
|++.||+|| +++|-+++. .+++.+.
T Consensus 155 DivsTG~TL-------r~NgL~~ie--~I~~ssA 179 (208)
T 1z7m_E 155 DIVETGNTL-------SANGLEVIE--KISDIST 179 (208)
T ss_dssp EEESSSHHH-------HTTTCEEEE--EEEECCE
T ss_pred EEeCChHHH-------HHCCCEEeE--EEEeeEE
Confidence 799999995 567888775 5555544
No 97
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=31.36 E-value=52 Score=22.33 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=20.0
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcC-CcEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQ-NHIF 155 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~G-a~~V 155 (195)
.++.+||||||=-.... ...+.|++.| ..++
T Consensus 18 ~~~~~ilivdd~~~~~~---~l~~~L~~~g~~~v~ 49 (146)
T 4dad_A 18 QGMINILVASEDASRLA---HLARLVGDAGRYRVT 49 (146)
T ss_dssp GGGCEEEEECSCHHHHH---HHHHHHHHHCSCEEE
T ss_pred CCCCeEEEEeCCHHHHH---HHHHHHhhCCCeEEE
Confidence 36779999999654444 4455666677 4443
No 98
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=31.17 E-value=88 Score=25.63 Aligned_cols=35 Identities=17% Similarity=-0.027 Sum_probs=22.3
Q ss_pred HhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 56 RYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 56 ~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
.+++++||+|++.-.---..+...|+.+++|++..
T Consensus 87 ~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 87 VIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHhcCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 34456899999863222234445578899998754
No 99
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=30.69 E-value=47 Score=23.55 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=26.0
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEE
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
+.+++.|+++++ +|.....++..|++.|-+.|
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v 84 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHV 84 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCE
Confidence 346788888865 88888899999999998654
No 100
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=30.52 E-value=66 Score=21.53 Aligned_cols=29 Identities=21% Similarity=0.186 Sum_probs=17.6
Q ss_pred CCEEEEEeeeccchHHHHHHHHHHhhcCCcEE
Q 029314 124 GERALIVDDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 124 Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
..+||||||=-... ....+.|++.|..+.
T Consensus 6 ~~~ilivdd~~~~~---~~l~~~L~~~g~~v~ 34 (136)
T 3kto_A 6 HPIIYLVDHQKDAR---AALSKLLSPLDVTIQ 34 (136)
T ss_dssp -CEEEEECSCHHHH---HHHHHHHTTSSSEEE
T ss_pred CCeEEEEcCCHHHH---HHHHHHHHHCCcEEE
Confidence 45899999854433 344556666676543
No 101
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=30.45 E-value=1.3e+02 Score=24.57 Aligned_cols=40 Identities=15% Similarity=0.115 Sum_probs=28.0
Q ss_pred HHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEEe
Q 029314 50 IDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMR 91 (195)
Q Consensus 50 ~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~r 91 (195)
...+.+.+++.++|+|++-.. + ..+..+|+.+++|++...
T Consensus 93 ~~~l~~~l~~~~pD~Vi~d~~-~-~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 93 LPQLADAYADDIPDLVLHDIT-S-YPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHTTSCCSEEEEETT-C-HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhccCCCEEEECCc-c-HHHHHHHHHcCCCEEEEe
Confidence 344555566678999997543 3 367788999999987543
No 102
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=30.33 E-value=1.1e+02 Score=21.53 Aligned_cols=41 Identities=10% Similarity=0.076 Sum_probs=28.2
Q ss_pred HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeE
Q 029314 140 LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFT 185 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 185 (195)
+.++.+..++.|.+.+...+... .+..+..++++.||..+-
T Consensus 110 l~~~~~~a~~~g~~~~~l~~~~~-----~N~~A~~~y~k~GF~~~G 150 (173)
T 4h89_A 110 CQDMIDWAGREGFRAIQFNAVVE-----TNTVAVKLWQSLGFRVIG 150 (173)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEET-----TCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCcEEEEeeecc-----cCHHHHHHHHHCCCEEEE
Confidence 45567777888988766544432 134678889999998763
No 103
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=29.48 E-value=59 Score=21.34 Aligned_cols=10 Identities=50% Similarity=0.763 Sum_probs=6.2
Q ss_pred CEEEEEeeec
Q 029314 125 ERALIVDDLV 134 (195)
Q Consensus 125 k~VLLVDDV~ 134 (195)
.+||||||=-
T Consensus 4 ~~ilivdd~~ 13 (127)
T 3i42_A 4 QQALIVEDYQ 13 (127)
T ss_dssp EEEEEECSCH
T ss_pred ceEEEEcCCH
Confidence 4677777643
No 104
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=29.47 E-value=73 Score=24.86 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=26.4
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
++|++|||| -.|......++.|.++|++++
T Consensus 29 L~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 29 LKGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp CTTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred cCCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 599999987 679999999999999999864
No 105
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=29.33 E-value=82 Score=25.42 Aligned_cols=32 Identities=13% Similarity=0.131 Sum_probs=27.5
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFIL 157 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~ 157 (195)
++|++|||| -.|......++.|.+.|++++-+
T Consensus 11 l~~k~VLVV----GgG~va~rka~~Ll~~Ga~VtVi 42 (274)
T 1kyq_A 11 LKDKRILLI----GGGEVGLTRLYKLMPTGCKLTLV 42 (274)
T ss_dssp CTTCEEEEE----EESHHHHHHHHHHGGGTCEEEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHhCCCEEEEE
Confidence 489999986 78999999999999999986533
No 106
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=29.30 E-value=88 Score=20.19 Aligned_cols=13 Identities=31% Similarity=0.353 Sum_probs=7.0
Q ss_pred CEEEEEeeeccch
Q 029314 125 ERALIVDDLVATG 137 (195)
Q Consensus 125 k~VLLVDDV~tTG 137 (195)
++||||||=-...
T Consensus 2 ~~ilivdd~~~~~ 14 (124)
T 1mb3_A 2 KKVLIVEDNELNM 14 (124)
T ss_dssp CEEEEECSCHHHH
T ss_pred cEEEEEcCCHHHH
Confidence 3566666644333
No 107
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=29.19 E-value=73 Score=21.48 Aligned_cols=42 Identities=7% Similarity=0.090 Sum_probs=34.2
Q ss_pred ccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEE
Q 029314 120 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQ 161 (195)
Q Consensus 120 ~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv 161 (195)
.+..|..|+=|++.-..|-|-.++.++|++......-...++
T Consensus 46 ~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv 87 (95)
T 3gge_A 46 TICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLI 87 (95)
T ss_dssp TCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 456899999999999999999999999999755444444444
No 108
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=28.84 E-value=86 Score=20.91 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=25.6
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEE
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
+.+++.|+++ +.+|..-..+++.|++.|-+.+
T Consensus 53 l~~~~~ivv~---C~~G~rS~~aa~~L~~~G~~~~ 84 (103)
T 3iwh_A 53 FNKNEIYYIV---CAGGVRSAKVVEYLEANGIDAV 84 (103)
T ss_dssp CCTTSEEEEE---CSSSSHHHHHHHHHHTTTCEEE
T ss_pred hcCCCeEEEE---CCCCHHHHHHHHHHHHcCCCEE
Confidence 4477888887 5688888889999999998654
No 109
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=28.36 E-value=72 Score=21.21 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=24.4
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
+.+++.|++.. .+|.....++..|++.|-
T Consensus 52 l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~ 80 (108)
T 3gk5_A 52 LERDKKYAVIC---AHGNRSAAAVEFLSQLGL 80 (108)
T ss_dssp SCTTSCEEEEC---SSSHHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEc---CCCcHHHHHHHHHHHcCC
Confidence 34677888887 689888899999999998
No 110
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=27.69 E-value=1.6e+02 Score=21.45 Aligned_cols=19 Identities=16% Similarity=-0.006 Sum_probs=15.6
Q ss_pred HHHHHHhhcCCcEEEEEEE
Q 029314 142 AAIRLLGSFQNHIFILICI 160 (195)
Q Consensus 142 ~a~~~L~~~Ga~~V~~~~l 160 (195)
...+.|++.|.+++...++
T Consensus 44 ~L~~~L~~~G~~v~~~~iV 62 (178)
T 3iwt_A 44 IIKQLLIENGHKIIGYSLV 62 (178)
T ss_dssp HHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHCCCEEEEEEEe
Confidence 4678899999998887776
No 111
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=27.68 E-value=64 Score=21.83 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=13.9
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSF 150 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~ 150 (195)
++.+||||||=-. ......+.|++.
T Consensus 12 ~~~~vlivdd~~~---~~~~l~~~L~~~ 36 (145)
T 3kyj_B 12 SPYNVMIVDDAAM---MRLYIASFIKTL 36 (145)
T ss_dssp CSEEEEEECSCHH---HHHHHHHHHTTC
T ss_pred CCCeEEEEcCCHH---HHHHHHHHHHhC
Confidence 4557888887433 333344555555
No 112
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=27.49 E-value=1e+02 Score=20.49 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=17.3
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
.++.+||||||=-.....+ .+.|++.|.
T Consensus 13 ~~~~~ilivdd~~~~~~~l---~~~L~~~g~ 40 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSHATLI---QYHLNQLGA 40 (138)
T ss_dssp -CCCEEEEECSCHHHHHHH---HHHHHHTTC
T ss_pred CCCCeEEEECCCHHHHHHH---HHHHHHcCC
Confidence 3677899999865544444 444555554
No 113
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=27.02 E-value=1.5e+02 Score=20.05 Aligned_cols=43 Identities=9% Similarity=0.162 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEe
Q 029314 139 TLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTIT 187 (195)
Q Consensus 139 Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (195)
-+.++.+.+++.|.+.+.+.+. .. +..+..++++.||......
T Consensus 102 ll~~~~~~a~~~g~~~i~l~v~--~~----N~~a~~~y~k~GF~~~g~~ 144 (169)
T 3g8w_A 102 LINHIIQYAKEQNIETLMIAIA--SN----NISAKVFFSSIGFENLAFE 144 (169)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEE--TT----CHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEe--cC----CHHHHHHHHHcCCEEeeee
Confidence 3455677777888888776655 22 2467889999999876653
No 114
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=26.77 E-value=1.3e+02 Score=21.17 Aligned_cols=44 Identities=20% Similarity=0.110 Sum_probs=30.4
Q ss_pred hHH-HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEE
Q 029314 137 GGT-LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 137 G~T-l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (195)
|+. +..+.+..++.|.+.+...+. .. +..+..++++.||.....
T Consensus 108 G~~Ll~~~~~~a~~~g~~~i~L~v~--~~----N~~A~~fY~k~GF~~~g~ 152 (180)
T 1tiq_A 108 GKHLLNKAIEIALERNKKNIWLGVW--EK----NENAIAFYKKMGFVQTGA 152 (180)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEEE--TT----CHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEeh--hc----CHHHHHHHHHcCCEEcCc
Confidence 444 455677778889888776554 22 356889999999977643
No 115
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=26.54 E-value=1e+02 Score=20.30 Aligned_cols=27 Identities=19% Similarity=0.049 Sum_probs=13.8
Q ss_pred CCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 124 GERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 124 Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
+++||||||=-..... ....|+..|..
T Consensus 3 ~~~ilivdd~~~~~~~---l~~~L~~~g~~ 29 (136)
T 1mvo_A 3 NKKILVVDDEESIVTL---LQYNLERSGYD 29 (136)
T ss_dssp CCEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCEEEEEECCHHHHHH---HHHHHHHCCcE
Confidence 4577888775433333 33344444543
No 116
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=26.49 E-value=88 Score=25.40 Aligned_cols=38 Identities=13% Similarity=-0.092 Sum_probs=25.2
Q ss_pred HHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 51 DLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 51 ~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
..+.+.++++++|+|++-. ....+..+|+.+++|++..
T Consensus 120 ~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 120 DELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 3444444556799998863 3344667788999998763
No 117
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=26.10 E-value=23 Score=29.11 Aligned_cols=18 Identities=33% Similarity=0.329 Sum_probs=13.4
Q ss_pred eeccchHHHHHHHHHHhhcCCcEEE
Q 029314 132 DLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 132 DV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
|++.||+||+ ++|-+++.
T Consensus 160 DivsTG~TLr-------aNgL~~ie 177 (289)
T 2vd3_A 160 DLSSTGTTLR-------MNHLRVID 177 (289)
T ss_dssp EEESSTHHHH-------HTTEEEEE
T ss_pred EEeCChHHHH-------HCCCEEeE
Confidence 7999999964 56666663
No 118
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=26.07 E-value=1.1e+02 Score=22.58 Aligned_cols=41 Identities=10% Similarity=-0.046 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhcCCCccEEEEeC-CcchHhHHHHHHHhCCCEEE
Q 029314 47 RDTIDLFVERYKDKNISVVAGIE-ARGFIFGPPIALAIGAKFVP 89 (195)
Q Consensus 47 ~~l~~~la~~~~~~~~D~Iv~v~-~~G~~lA~~la~~l~~p~~~ 89 (195)
...++.|++... ++|+|+... ..|-.++..+|..|+.|++.
T Consensus 57 e~~a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~s 98 (166)
T 3fet_A 57 DAVSEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTAT 98 (166)
T ss_dssp HHHHHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCcee
Confidence 345566666554 688776654 46668999999999999864
No 119
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=26.01 E-value=1e+02 Score=19.61 Aligned_cols=11 Identities=45% Similarity=0.543 Sum_probs=6.6
Q ss_pred EEEEEeeeccc
Q 029314 126 RALIVDDLVAT 136 (195)
Q Consensus 126 ~VLLVDDV~tT 136 (195)
+||||||=-..
T Consensus 3 ~ilivdd~~~~ 13 (120)
T 2a9o_A 3 KILIVDDEKPI 13 (120)
T ss_dssp EEEEECSCHHH
T ss_pred eEEEEcCCHHH
Confidence 57777775433
No 120
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=25.98 E-value=90 Score=21.23 Aligned_cols=27 Identities=19% Similarity=0.129 Sum_probs=16.6
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
++.+||||||=-.. .....+.|++.|.
T Consensus 14 ~~~~iLivdd~~~~---~~~l~~~L~~~~~ 40 (152)
T 3eul_A 14 EKVRVVVGDDHPLF---REGVVRALSLSGS 40 (152)
T ss_dssp CCEEEEEECSSHHH---HHHHHHHHHHHSS
T ss_pred ceEEEEEEcCCHHH---HHHHHHHHhhCCC
Confidence 67789999984433 3334455555553
No 121
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=25.97 E-value=98 Score=21.12 Aligned_cols=28 Identities=21% Similarity=0.237 Sum_probs=17.4
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
...+||||||=-.. .....+.|++.|..
T Consensus 13 ~~~~ILivdd~~~~---~~~l~~~L~~~g~~ 40 (153)
T 3hv2_A 13 RRPEILLVDSQEVI---LQRLQQLLSPLPYT 40 (153)
T ss_dssp SCCEEEEECSCHHH---HHHHHHHHTTSSCE
T ss_pred CCceEEEECCCHHH---HHHHHHHhcccCcE
Confidence 56689999885433 34445556666654
No 122
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=25.95 E-value=82 Score=26.18 Aligned_cols=67 Identities=15% Similarity=0.095 Sum_probs=43.8
Q ss_pred hHHHHHHHhCCCEEEEecCCCCCCceeeeeeeecccceeEEEe--ecccCCCCEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 75 FGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMH--VGAVQAGERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 75 lA~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
-...+|+..++|++-.--....|.+.+..-+ .+. .+. ++|.+|.+|=|+ +++.+..+.++...|+
T Consensus 116 ~~~~lA~~~~vPVINag~~~~HPtQaLaDl~---------Ti~e~~g~-l~glkva~vGD~---~rva~Sl~~~~~~~G~ 182 (323)
T 3gd5_A 116 ELEEYAHYAGIPVINALTDHEHPCQVVADLL---------TIRENFGR-LAGLKLAYVGDG---NNVAHSLLLGCAKVGM 182 (323)
T ss_dssp HHHHHHHHHCSCEEEEECSSCCHHHHHHHHH---------HHHHHHSC-CTTCEEEEESCC---CHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCEEeCCCCCCCcHHHHHHHH---------HHHHHhCC-CCCCEEEEECCC---CcHHHHHHHHHHHcCC
Confidence 4457788889998765433323332221111 111 122 489999999998 8999999999999998
Q ss_pred cE
Q 029314 153 HI 154 (195)
Q Consensus 153 ~~ 154 (195)
++
T Consensus 183 ~v 184 (323)
T 3gd5_A 183 SI 184 (323)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 123
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=25.84 E-value=72 Score=21.24 Aligned_cols=26 Identities=4% Similarity=-0.022 Sum_probs=17.4
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcC
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQ 151 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~G 151 (195)
...+||||||=-... ....+.|++.|
T Consensus 13 ~~~~ilivdd~~~~~---~~l~~~L~~~g 38 (135)
T 3snk_A 13 KRKQVALFSSDPNFK---RDVATRLDALA 38 (135)
T ss_dssp CCEEEEEECSCHHHH---HHHHHHHHHTS
T ss_pred CCcEEEEEcCCHHHH---HHHHHHHhhcC
Confidence 456899999955444 44456666777
No 124
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=25.63 E-value=23 Score=29.25 Aligned_cols=18 Identities=39% Similarity=0.350 Sum_probs=13.0
Q ss_pred eeccchHHHHHHHHHHhhcCCcEEE
Q 029314 132 DLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 132 DV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
|++.||+||+ ++|-+++.
T Consensus 169 DivsTG~TLr-------aNgL~~ie 186 (299)
T 1h3d_A 169 DLVSTGATLE-------ANGLREVE 186 (299)
T ss_dssp EEESSCHHHH-------HTTEEEEE
T ss_pred ecccCHHHHH-------HCCCEEeE
Confidence 7999999965 45655553
No 125
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=25.36 E-value=95 Score=25.26 Aligned_cols=37 Identities=14% Similarity=0.113 Sum_probs=24.1
Q ss_pred HHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 52 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 52 ~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
.+.+.++++++|+|++-. ....+..+|+.+++|++..
T Consensus 114 ~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 114 EALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 344444456799998654 2234667788899998753
No 126
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.86 E-value=1.2e+02 Score=20.62 Aligned_cols=28 Identities=18% Similarity=0.190 Sum_probs=15.3
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
++.+||||||=-..... ..+.|++.|..
T Consensus 6 ~~~~iLivdd~~~~~~~---l~~~L~~~g~~ 33 (154)
T 2rjn_A 6 KNYTVMLVDDEQPILNS---LKRLIKRLGCN 33 (154)
T ss_dssp SCCEEEEECSCHHHHHH---HHHHHHTTTCE
T ss_pred CCCeEEEEcCCHHHHHH---HHHHHHHcCCe
Confidence 45678888875433333 33444455543
No 127
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=24.82 E-value=52 Score=21.79 Aligned_cols=32 Identities=9% Similarity=0.073 Sum_probs=25.2
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
.+++.|+++.+ +|.....++..|++.|-+.+.
T Consensus 56 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 87 (108)
T 1gmx_A 56 DFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVY 87 (108)
T ss_dssp CTTSCEEEECS---SSSHHHHHHHHHHHHTCSSEE
T ss_pred CCCCCEEEEcC---CCchHHHHHHHHHHcCCceEE
Confidence 46788888864 688888899999999986543
No 128
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=24.78 E-value=1e+02 Score=24.89 Aligned_cols=36 Identities=14% Similarity=0.207 Sum_probs=24.4
Q ss_pred HHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 53 FVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 53 la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
+.+.+++.++|+|++-.. ...+..+|+.+|+|++..
T Consensus 99 l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~ 134 (384)
T 2p6p_A 99 MLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQ 134 (384)
T ss_dssp HHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEe
Confidence 333344457899998543 345667889999998754
No 129
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=24.74 E-value=1e+02 Score=22.02 Aligned_cols=28 Identities=25% Similarity=0.210 Sum_probs=16.8
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
.+.+||||||=-..... ..+.|++.|..
T Consensus 6 ~~~~iLivdd~~~~~~~---l~~~L~~~g~~ 33 (184)
T 3rqi_A 6 SDKNFLVIDDNEVFAGT---LARGLERRGYA 33 (184)
T ss_dssp -CCEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCCeEEEEcCCHHHHHH---HHHHHHHCCCE
Confidence 46689999996544333 34455566654
No 130
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=24.65 E-value=70 Score=26.70 Aligned_cols=32 Identities=13% Similarity=0.009 Sum_probs=23.8
Q ss_pred hcCCCccEEEEeCCcchHhHHHHHHHhCCCEEEE
Q 029314 57 YKDKNISVVAGIEARGFIFGPPIALAIGAKFVPM 90 (195)
Q Consensus 57 ~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~~~~ 90 (195)
++++++|+|++-. ++..+..+|+.+|+|++..
T Consensus 140 ~~~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 140 CRKWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHHHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred HHhcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 3345789998765 3466788899999998764
No 131
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=24.59 E-value=25 Score=29.14 Aligned_cols=18 Identities=39% Similarity=0.521 Sum_probs=13.2
Q ss_pred eeeccchHHHHHHHHHHhhcCCcEE
Q 029314 131 DDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 131 DDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
=|++.||+||+ +.|-+++
T Consensus 173 vDiVsTG~TLr-------aNgL~~i 190 (304)
T 1nh8_A 173 ADVVGSGRTLS-------QHDLVAF 190 (304)
T ss_dssp EEEESSSHHHH-------HTTEEEE
T ss_pred EEEeCChHHHH-------HCcCEEc
Confidence 37999999965 4566665
No 132
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=24.29 E-value=1.4e+02 Score=20.55 Aligned_cols=40 Identities=20% Similarity=0.126 Sum_probs=28.9
Q ss_pred HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeE
Q 029314 140 LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFT 185 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 185 (195)
+.++.+.+++.|...+...+. .. +..+.+++++.||....
T Consensus 103 l~~~~~~a~~~g~~~i~l~v~--~~----N~~A~~~Yek~GF~~~~ 142 (166)
T 2ae6_A 103 LSYIKDMAEISGIHKLSLRVM--AT----NQEAIRFYEKHGFVQEA 142 (166)
T ss_dssp HHHHHHHHHHHTCCEEEEEEE--TT----CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEee--cC----CHHHHHHHHHcCCEEee
Confidence 455677778889888776654 22 34688999999997654
No 133
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=23.98 E-value=1.3e+02 Score=19.95 Aligned_cols=14 Identities=29% Similarity=0.287 Sum_probs=8.5
Q ss_pred CCCEEEEEeeeccc
Q 029314 123 AGERALIVDDLVAT 136 (195)
Q Consensus 123 ~Gk~VLLVDDV~tT 136 (195)
...+||||||=-..
T Consensus 6 ~~~~iLivdd~~~~ 19 (142)
T 3cg4_A 6 HKGDVMIVDDDAHV 19 (142)
T ss_dssp CCCEEEEECSCHHH
T ss_pred CCCeEEEEcCCHHH
Confidence 45577777775433
No 134
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=23.96 E-value=1.1e+02 Score=19.89 Aligned_cols=29 Identities=21% Similarity=0.094 Sum_probs=24.0
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
+.+++.|+++. .+|.....++..|++.|-
T Consensus 53 l~~~~~iv~yC---~~g~rs~~a~~~L~~~G~ 81 (103)
T 3eme_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGI 81 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTC
T ss_pred CCCCCeEEEEC---CCChHHHHHHHHHHHCCC
Confidence 34678899886 588888889999999998
No 135
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=23.90 E-value=64 Score=21.68 Aligned_cols=38 Identities=8% Similarity=0.225 Sum_probs=32.0
Q ss_pred cCCCCEEEEEeeeccchHHHHHHHHHHhhcC---CcEEEEE
Q 029314 121 VQAGERALIVDDLVATGGTLSAAIRLLGSFQ---NHIFILI 158 (195)
Q Consensus 121 ~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~G---a~~V~~~ 158 (195)
+..|..|+=||+.-.++.|...+.++|+... ...+.+.
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~ 100 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIA 100 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEE
Confidence 6789999999999999999999999999887 5554433
No 136
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=23.84 E-value=98 Score=20.13 Aligned_cols=12 Identities=33% Similarity=0.515 Sum_probs=7.4
Q ss_pred CEEEEEeeeccc
Q 029314 125 ERALIVDDLVAT 136 (195)
Q Consensus 125 k~VLLVDDV~tT 136 (195)
.+||||||=-..
T Consensus 5 ~~ilivdd~~~~ 16 (128)
T 1jbe_A 5 LKFLVVDDFSTM 16 (128)
T ss_dssp CCEEEECSCHHH
T ss_pred cEEEEECCCHHH
Confidence 467788774433
No 137
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=23.64 E-value=1.3e+02 Score=19.44 Aligned_cols=11 Identities=55% Similarity=0.733 Sum_probs=6.5
Q ss_pred CEEEEEeeecc
Q 029314 125 ERALIVDDLVA 135 (195)
Q Consensus 125 k~VLLVDDV~t 135 (195)
.+||||||=-.
T Consensus 4 ~~ilivdd~~~ 14 (124)
T 1srr_A 4 EKILIVDDQSG 14 (124)
T ss_dssp CEEEEECSCHH
T ss_pred ceEEEEeCCHH
Confidence 46777776443
No 138
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=23.33 E-value=1.2e+02 Score=25.23 Aligned_cols=43 Identities=9% Similarity=-0.082 Sum_probs=28.7
Q ss_pred HHHHHHHHHhcCCCccEEEEeCCcchHhH-HHHHHHhCCCEEEE
Q 029314 48 DTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 90 (195)
Q Consensus 48 ~l~~~la~~~~~~~~D~Iv~v~~~G~~lA-~~la~~l~~p~~~~ 90 (195)
.+...+.+.+.+++||+|+........++ ...|..+++|++..
T Consensus 98 ~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 98 KILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 34444555555568999999876555444 45677889998654
No 139
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=23.21 E-value=1.5e+02 Score=19.83 Aligned_cols=40 Identities=20% Similarity=0.046 Sum_probs=27.0
Q ss_pred HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeE
Q 029314 140 LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFT 185 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 185 (195)
+..+.+..++.|...+...+. .. +..+..++++.||....
T Consensus 107 l~~~~~~a~~~g~~~i~l~v~--~~----N~~a~~~Y~k~GF~~~~ 146 (153)
T 1z4e_A 107 VCWAIERAKERGCHLIQLTTD--KQ----RPDALRFYEQLGFKASH 146 (153)
T ss_dssp HHHHHHHHHHTTEEEEEEEEE--TT----CTTHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEEc--cC----ChHHHHHHHHcCCceec
Confidence 455667778888776665543 22 23578889999997653
No 140
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=23.20 E-value=74 Score=22.08 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=33.1
Q ss_pred ccCCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEE
Q 029314 120 AVQAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILI 158 (195)
Q Consensus 120 ~~~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~ 158 (195)
.+..|..|+=|++.-.++.|...+.++|+..+...+...
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~ 113 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIV 113 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEE
Confidence 466899999999999999999999999999877755443
No 141
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=23.16 E-value=1.6e+02 Score=20.53 Aligned_cols=38 Identities=11% Similarity=-0.035 Sum_probs=27.2
Q ss_pred HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCcee
Q 029314 140 LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQ 183 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~ 183 (195)
+..+.+..++.|...+...+. .. +..+.+++++.||..
T Consensus 110 l~~~~~~a~~~g~~~i~L~v~--~~----N~~A~~fY~k~GF~~ 147 (170)
T 2bei_A 110 IKKVAEVALDKGCSQFRLAVL--DW----NQRAMDLYKALGAQD 147 (170)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--TT----CHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCCCEEEEEEe--cc----CHHHHHHHHHCCCEe
Confidence 455677788889888766554 22 346788899999874
No 142
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=23.15 E-value=1.4e+02 Score=19.83 Aligned_cols=30 Identities=7% Similarity=0.061 Sum_probs=17.7
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhh-cCCcEE
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGS-FQNHIF 155 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~-~Ga~~V 155 (195)
...+||||||=-..-.. ..+.|++ .|..++
T Consensus 3 ~~~~ilivdd~~~~~~~---l~~~L~~~~~~~v~ 33 (140)
T 3lua_A 3 LDGTVLLIDYFEYEREK---TKIIFDNIGEYDFI 33 (140)
T ss_dssp CCCEEEEECSCHHHHHH---HHHHHHHHCCCEEE
T ss_pred CCCeEEEEeCCHHHHHH---HHHHHHhccCccEE
Confidence 35689999986544443 4455555 565443
No 143
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=23.05 E-value=1.8e+02 Score=20.71 Aligned_cols=41 Identities=20% Similarity=0.118 Sum_probs=29.3
Q ss_pred HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEE
Q 029314 140 LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (195)
|..+.+.+++.|.+.+...+. .. +..+..++++.||.....
T Consensus 134 l~~~~~~a~~~g~~~i~L~v~--~~----N~~A~~fY~k~GF~~~~~ 174 (199)
T 1u6m_A 134 LDALPEVAKASGKQALGLNVD--FD----NPGARKLYASKGFKDVTT 174 (199)
T ss_dssp HHTHHHHHHTTTCSEEEEEEE--TT----CHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEEe--cC----CHHHHHHHHHCCCEEccE
Confidence 455777888889887765544 22 246889999999987654
No 144
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=23.03 E-value=1.3e+02 Score=23.99 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=25.7
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
++|++++|+ -+|++-++++..|.+.|+..+.
T Consensus 118 l~~k~~lvl----GaGg~~~aia~~L~~~G~~~v~ 148 (272)
T 3pwz_A 118 LRNRRVLLL----GAGGAVRGALLPFLQAGPSELV 148 (272)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTCCSEEE
T ss_pred ccCCEEEEE----CccHHHHHHHHHHHHcCCCEEE
Confidence 479999976 5799999999999999986543
No 145
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=23.00 E-value=1.7e+02 Score=20.06 Aligned_cols=42 Identities=14% Similarity=-0.029 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEE
Q 029314 139 TLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 139 Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (195)
-+.++.+..++.|...+.+.+. .. +....+++++.||.....
T Consensus 103 ll~~~~~~a~~~g~~~i~l~v~--~~----N~~a~~~y~k~GF~~~g~ 144 (172)
T 2j8m_A 103 LLQALIERARAQGLHVMVAAIE--SG----NAASIGLHRRLGFEISGQ 144 (172)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEE--TT----CHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCccEEEEEEc--CC----CHHHHHHHHHCCCEEEee
Confidence 4555677777889888766554 22 245788899999886643
No 146
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=22.94 E-value=1.3e+02 Score=19.07 Aligned_cols=14 Identities=36% Similarity=0.363 Sum_probs=7.6
Q ss_pred EEEEEeeeccchHH
Q 029314 126 RALIVDDLVATGGT 139 (195)
Q Consensus 126 ~VLLVDDV~tTG~T 139 (195)
+||||||=-.....
T Consensus 3 ~ilivdd~~~~~~~ 16 (116)
T 3a10_A 3 RILVVDDEPNIREL 16 (116)
T ss_dssp EEEEECSCHHHHHH
T ss_pred EEEEEeCCHHHHHH
Confidence 56777764443333
No 147
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=22.89 E-value=1.4e+02 Score=24.51 Aligned_cols=36 Identities=17% Similarity=0.057 Sum_probs=28.5
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecC
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLN 164 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~ 164 (195)
++||++||+ -+|++-++++..|.+.|++.|. ++++.
T Consensus 152 l~gk~~lVl----GaGG~g~aia~~L~~~Ga~~V~---i~nR~ 187 (315)
T 3tnl_A 152 IIGKKMTIC----GAGGAATAICIQAALDGVKEIS---IFNRK 187 (315)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTTCSEEE---EEECS
T ss_pred ccCCEEEEE----CCChHHHHHHHHHHHCCCCEEE---EEECC
Confidence 589999976 4699999999999999997654 34554
No 148
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=22.76 E-value=1.8e+02 Score=20.11 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=27.8
Q ss_pred HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeE
Q 029314 140 LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFT 185 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 185 (195)
+.++.+.+++.|...+.+.+. .. +....+++++.||....
T Consensus 105 l~~~~~~a~~~g~~~i~l~v~--~~----N~~a~~~y~k~GF~~~g 144 (175)
T 1yr0_A 105 MQALIDHAGGNDVHVLIAAIE--AE----NTASIRLHESLGFRVVG 144 (175)
T ss_dssp HHHHHHHHHTTTCCEEEEEEE--TT----CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCccEEEEEec--CC----CHHHHHHHHHCCCEEEE
Confidence 455677777788887765544 22 34678889999997654
No 149
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=22.69 E-value=1.2e+02 Score=24.07 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=20.2
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCcEE
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNHIF 155 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V 155 (195)
.+.+||+|||=-. ......+.|++.|..++
T Consensus 159 l~~rILvVdD~~~---~~~~l~~~L~~~g~~v~ 188 (286)
T 3n0r_A 159 LATEVLIIEDEPV---IAADIEALVRELGHDVT 188 (286)
T ss_dssp CCCEEEEECCSHH---HHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEcCCHH---HHHHHHHHhhccCceEE
Confidence 4568999999544 33345566777787765
No 150
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=22.61 E-value=1.4e+02 Score=24.90 Aligned_cols=45 Identities=16% Similarity=0.019 Sum_probs=32.3
Q ss_pred hcCHHHHHHHHHHHHHHhcCCCccEEEEeCCcchHhHHHHHHHhCCCE
Q 029314 40 LLDTKAFRDTIDLFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKF 87 (195)
Q Consensus 40 ~~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~G~~lA~~la~~l~~p~ 87 (195)
+.|++.+......++.. .++|.|++....+.+++..+++.+|+|.
T Consensus 57 ~~d~~~~~~~~~~~~~~---~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 FEDEEAAMDVVRQTFVE---FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp TTCHHHHHHHHHHHHHH---SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred CCCHHHHHHHHHHhhhh---cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 45666655555555443 4689999888778888889999988874
No 151
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}
Probab=22.34 E-value=1.8e+02 Score=20.51 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=29.0
Q ss_pred HHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEE
Q 029314 140 LSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 140 l~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (195)
+.++.+..++.|...+.+.+. .. +....+++++.||...-.
T Consensus 112 l~~~~~~a~~~g~~~i~l~v~--~~----N~~a~~~yek~GF~~~g~ 152 (182)
T 2jlm_A 112 MNELIKRAVESEVHVMVGCID--AT----NVASIQLHQKLGFIHSGT 152 (182)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--TT----CHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCceEEEEEEe--CC----CHHHHHHHHHCCCcEEEE
Confidence 556777777888888776655 22 246788999999886543
No 152
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=22.31 E-value=99 Score=24.94 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=26.7
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFIL 157 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~ 157 (195)
++|+++||+ -+|++-++++..|.+.|++.+.+
T Consensus 120 ~~~k~vlvl----GaGGaaraia~~L~~~G~~~v~v 151 (282)
T 3fbt_A 120 IKNNICVVL----GSGGAARAVLQYLKDNFAKDIYV 151 (282)
T ss_dssp CTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEE
T ss_pred ccCCEEEEE----CCcHHHHHHHHHHHHcCCCEEEE
Confidence 479999976 67999999999999999976543
No 153
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=22.14 E-value=2.5e+02 Score=21.79 Aligned_cols=63 Identities=14% Similarity=0.057 Sum_probs=37.7
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEee
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTITS 188 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (195)
.+|++||++== .+ .-....+.|++.|+++..+.+.-..........+...+....+..+.+||
T Consensus 139 ~~g~~vLi~rg---~~-~r~~L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~v~ftS 201 (269)
T 3re1_A 139 VPGSRVLIMRG---NE-GRELLAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLVVSS 201 (269)
T ss_dssp SSSCEEEEEEC---SS-CCCHHHHHHHHTTCEEEEEECEEEECCCCCTTTTHHHHHHTTCCEEECSS
T ss_pred CCCCEEEEEcc---Cc-cHHHHHHHHHHCCCEEEEEeEEEEECCCCCHHHHHHHHHcCCCCEEEEcC
Confidence 47899998631 11 12345788999999887766654433222223344455566677777766
No 154
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=22.03 E-value=1.3e+02 Score=20.01 Aligned_cols=9 Identities=33% Similarity=0.693 Sum_probs=5.5
Q ss_pred CEEEEEeee
Q 029314 125 ERALIVDDL 133 (195)
Q Consensus 125 k~VLLVDDV 133 (195)
.+||||||=
T Consensus 4 ~~ilivdd~ 12 (143)
T 3jte_A 4 AKILVIDDE 12 (143)
T ss_dssp CEEEEECSC
T ss_pred CEEEEEcCC
Confidence 356677663
No 155
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=21.95 E-value=1.2e+02 Score=25.31 Aligned_cols=43 Identities=9% Similarity=-0.052 Sum_probs=29.4
Q ss_pred HHHHHHHHHhcCCCccEEEEeCCcchHhH-HHHHHHhCCCEEEE
Q 029314 48 DTIDLFVERYKDKNISVVAGIEARGFIFG-PPIALAIGAKFVPM 90 (195)
Q Consensus 48 ~l~~~la~~~~~~~~D~Iv~v~~~G~~lA-~~la~~l~~p~~~~ 90 (195)
.+...+.+.+.+.+||+|+........++ ...|..+++|++..
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 34444555565668999999876555554 55677889998654
No 156
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=21.93 E-value=1.1e+02 Score=19.99 Aligned_cols=26 Identities=31% Similarity=0.217 Sum_probs=15.1
Q ss_pred EEEEEeeeccchHHHHHHHHHHhhcCCcE
Q 029314 126 RALIVDDLVATGGTLSAAIRLLGSFQNHI 154 (195)
Q Consensus 126 ~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~ 154 (195)
+||||||=-..- ....+.|++.|..+
T Consensus 3 ~ilivdd~~~~~---~~l~~~L~~~g~~v 28 (134)
T 3f6c_A 3 NAIIIDDHPLAI---AAIRNLLIKNDIEI 28 (134)
T ss_dssp EEEEECCCHHHH---HHHHHHHHHTTEEE
T ss_pred EEEEEcCCHHHH---HHHHHHHhhCCcEE
Confidence 688888754433 34455566666443
No 157
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=21.92 E-value=1.4e+02 Score=23.90 Aligned_cols=31 Identities=16% Similarity=0.094 Sum_probs=26.0
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
++|+++||+ -+|++-++++..|.+.|++.+.
T Consensus 125 l~~k~vlVl----GaGG~g~aia~~L~~~G~~~v~ 155 (283)
T 3jyo_A 125 AKLDSVVQV----GAGGVGNAVAYALVTHGVQKLQ 155 (283)
T ss_dssp CCCSEEEEE----CCSHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEE
Confidence 589999976 5699999999999999997554
No 158
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=21.64 E-value=92 Score=24.86 Aligned_cols=46 Identities=9% Similarity=-0.052 Sum_probs=29.7
Q ss_pred cCHHHHHHHHHHHHHHhcCCCccEEEEeCCc----chHhHHHHHHHhCCCEEE
Q 029314 41 LDTKAFRDTIDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFVP 89 (195)
Q Consensus 41 ~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~----G~~lA~~la~~l~~p~~~ 89 (195)
.++.....+...+.++. ++|+|++-.+. |-.++..+|..|+.|++.
T Consensus 95 ~~~~~~a~~La~~i~~~---~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 144 (264)
T 1o97_C 95 SDAIVVGRILTEVIKKE---APDMVFAGVQSSDQAYASTGISVASYLNWPHAA 144 (264)
T ss_dssp CCHHHHHHHHHHHHHHH---CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHhc---CCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 35555444444444333 57887776532 347999999999999864
No 159
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.25 E-value=2e+02 Score=19.99 Aligned_cols=42 Identities=14% Similarity=0.256 Sum_probs=28.8
Q ss_pred HHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEE
Q 029314 139 TLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 139 Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (195)
-+.++.+..++.|...+.+.+. .. +..+.+++++.||.....
T Consensus 102 ll~~~~~~a~~~g~~~i~l~v~--~~----N~~A~~~yek~GF~~~g~ 143 (175)
T 1vhs_A 102 LLQEALRIAPNLGIRSLMAFIF--GH----NKPSLKLFEKHGFAEWGL 143 (175)
T ss_dssp HHHHHHHHGGGGTCSEEEEEEE--TT----CHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCceEEEEEEe--cC----CHHHHHHHHHCCCEEEeE
Confidence 3455667777788888776554 22 245788999999976643
No 160
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=21.17 E-value=1.5e+02 Score=19.77 Aligned_cols=28 Identities=25% Similarity=0.350 Sum_probs=16.1
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
...+||||||=-. ......+.|++.|..
T Consensus 4 ~~~~ILivdd~~~---~~~~l~~~L~~~~~~ 31 (144)
T 3kht_A 4 RSKRVLVVEDNPD---DIALIRRVLDRKDIH 31 (144)
T ss_dssp -CEEEEEECCCHH---HHHHHHHHHHHTTCC
T ss_pred CCCEEEEEeCCHH---HHHHHHHHHHhcCCC
Confidence 3567888888433 333445556666654
No 161
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=21.15 E-value=1.8e+02 Score=19.64 Aligned_cols=41 Identities=12% Similarity=-0.089 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeE
Q 029314 139 TLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFT 185 (195)
Q Consensus 139 Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 185 (195)
-+.++.+.+++.|...+.+.+. .. +....+++++.||....
T Consensus 116 ll~~~~~~~~~~g~~~i~l~~~--~~----N~~a~~~y~k~GF~~~~ 156 (165)
T 1s3z_A 116 LIAAVQRWGTNKGCREMASDTS--PE----NTISQKVHQALGFEETE 156 (165)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--TT----CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEecC--cC----CHHHHHHHHHcCCeEee
Confidence 3455777777888887765543 22 24678889999997654
No 162
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=20.99 E-value=1.4e+02 Score=20.26 Aligned_cols=10 Identities=60% Similarity=0.783 Sum_probs=6.6
Q ss_pred CCEEEEEeee
Q 029314 124 GERALIVDDL 133 (195)
Q Consensus 124 Gk~VLLVDDV 133 (195)
..+||||||=
T Consensus 4 ~~~ILivdd~ 13 (151)
T 3kcn_A 4 NERILLVDDD 13 (151)
T ss_dssp CCEEEEECSC
T ss_pred CCeEEEEeCC
Confidence 4567777774
No 163
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=20.95 E-value=1.9e+02 Score=19.19 Aligned_cols=42 Identities=17% Similarity=0.101 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEE
Q 029314 139 TLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTI 186 (195)
Q Consensus 139 Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (195)
-+..+.+.+++.|.+.+.+.+. .. +.....++++.||..+..
T Consensus 95 ll~~~~~~~~~~g~~~i~l~~~--~~----n~~a~~~y~~~GF~~~~~ 136 (162)
T 3lod_A 95 LLAALEAKARQRDCHTLRLETG--IH----QHAAIALYTRNGYQTRCA 136 (162)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEE--TT----CHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHCCCcEEEEEec--CC----CHHHHHHHHHcCCEEccc
Confidence 4556777788888887766544 22 345788899999987643
No 164
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=20.90 E-value=60 Score=25.11 Aligned_cols=44 Identities=9% Similarity=0.080 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCccEEEEeC-CcchHhHHHHHHHhCCCEE
Q 029314 42 DTKAFRDTIDLFVERYKDKNISVVAGIE-ARGFIFGPPIALAIGAKFV 88 (195)
Q Consensus 42 ~p~~~~~l~~~la~~~~~~~~D~Iv~v~-~~G~~lA~~la~~l~~p~~ 88 (195)
+++.+..+...+.+.+ +||+|+... ..|-.++..+|..|+.|++
T Consensus 75 ~~~~~a~~l~~~i~~~---~p~~Vl~g~t~~G~~laprlAa~L~~~~~ 119 (217)
T 3ih5_A 75 TSLPHTSILVNLFKEE---QPQICLMGATVIGRDLGPRVSSALTSGLT 119 (217)
T ss_dssp CHHHHHHHHHHHHHHH---CCSEEEEECSHHHHHHHHHHHHHTTCCCB
T ss_pred CHHHHHHHHHHHHHhc---CCCEEEEeCCcchhhHHHHHHHHhCCCcc
Confidence 5555544444444443 578776654 5666899999999999875
No 165
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=20.87 E-value=97 Score=24.62 Aligned_cols=46 Identities=11% Similarity=-0.042 Sum_probs=30.3
Q ss_pred cCHHHHHHHHHHHHHHhcCCCccEEEEeCCc----chHhHHHHHHHhCCCEEE
Q 029314 41 LDTKAFRDTIDLFVERYKDKNISVVAGIEAR----GFIFGPPIALAIGAKFVP 89 (195)
Q Consensus 41 ~~p~~~~~l~~~la~~~~~~~~D~Iv~v~~~----G~~lA~~la~~l~~p~~~ 89 (195)
.++.....+...+.++ .++|+|++-.+. |-.++..+|..||.|++.
T Consensus 99 ~~~~~~A~~La~~i~~---~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt 148 (255)
T 1efv_B 99 LGPLQVARVLAKLAEK---EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148 (255)
T ss_dssp CCHHHHHHHHHHHHHH---HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHh---cCCCEEEEeCcccCCchhhHHHHHHHHhCCCccc
Confidence 4566554444444433 357887776532 347999999999999863
No 166
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.82 E-value=1.6e+02 Score=19.41 Aligned_cols=27 Identities=19% Similarity=-0.017 Sum_probs=13.0
Q ss_pred CCEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 124 GERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 124 Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
..+||||||=-.... ...+.|++.|..
T Consensus 4 ~~~iLivdd~~~~~~---~l~~~L~~~g~~ 30 (142)
T 2qxy_A 4 TPTVMVVDESRITFL---AVKNALEKDGFN 30 (142)
T ss_dssp CCEEEEECSCHHHHH---HHHHHHGGGTCE
T ss_pred CCeEEEEeCCHHHHH---HHHHHHHhCCCE
Confidence 446777776433332 233344444543
No 167
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=20.70 E-value=1.5e+02 Score=23.63 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=25.7
Q ss_pred CCCCEEEEEeeeccchHHHHHHHHHHhhcCCcEEE
Q 029314 122 QAGERALIVDDLVATGGTLSAAIRLLGSFQNHIFI 156 (195)
Q Consensus 122 ~~Gk~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~~V~ 156 (195)
++|++++|+ -+|+.-++++..|.+.|+..+.
T Consensus 124 l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~ 154 (281)
T 3o8q_A 124 LKGATILLI----GAGGAARGVLKPLLDQQPASIT 154 (281)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHTTCCSEEE
T ss_pred ccCCEEEEE----CchHHHHHHHHHHHhcCCCeEE
Confidence 489999976 5799999999999999986543
No 168
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.42 E-value=1.3e+02 Score=19.15 Aligned_cols=26 Identities=23% Similarity=0.120 Sum_probs=13.6
Q ss_pred CEEEEEeeeccchHHHHHHHHHHhhcCCc
Q 029314 125 ERALIVDDLVATGGTLSAAIRLLGSFQNH 153 (195)
Q Consensus 125 k~VLLVDDV~tTG~Tl~~a~~~L~~~Ga~ 153 (195)
.+||||||=-..... ..+.|++.|.+
T Consensus 6 ~~ilivdd~~~~~~~---l~~~L~~~g~~ 31 (127)
T 2gkg_A 6 KKILIVESDTALSAT---LRSALEGRGFT 31 (127)
T ss_dssp CEEEEECSCHHHHHH---HHHHHHHHTCE
T ss_pred CeEEEEeCCHHHHHH---HHHHHHhcCce
Confidence 468888875433333 33444444543
No 169
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=20.38 E-value=1.1e+02 Score=20.59 Aligned_cols=28 Identities=18% Similarity=0.183 Sum_probs=23.0
Q ss_pred CC-CEEEEEeeeccchHHHHHHHHHHhhcCC
Q 029314 123 AG-ERALIVDDLVATGGTLSAAIRLLGSFQN 152 (195)
Q Consensus 123 ~G-k~VLLVDDV~tTG~Tl~~a~~~L~~~Ga 152 (195)
++ +.|++.++ .+|.....++..|++.|-
T Consensus 87 ~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~ 115 (134)
T 3g5j_A 87 LNYDNIVIYCA--RGGMRSGSIVNLLSSLGV 115 (134)
T ss_dssp TTCSEEEEECS--SSSHHHHHHHHHHHHTTC
T ss_pred cCCCeEEEEEC--CCChHHHHHHHHHHHcCC
Confidence 55 78888854 578888889999999997
No 170
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=20.27 E-value=2e+02 Score=19.03 Aligned_cols=44 Identities=16% Similarity=-0.108 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeEEe
Q 029314 138 GTLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFTIT 187 (195)
Q Consensus 138 ~Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (195)
.-+..+.+.+++.|...+.+.+. .. +.....++++.||......
T Consensus 108 ~ll~~~~~~~~~~g~~~i~l~~~--~~----n~~a~~~y~k~GF~~~~~~ 151 (164)
T 4e0a_A 108 LIFEAIISYGKAHQVDAIELDVY--DF----NDRAKAFYHSLGMRCQKQT 151 (164)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEE--TT----CHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEEE--cC----CHHHHHHHHHcCCEEecee
Confidence 34556777788888888776654 22 2467888999999877654
No 171
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=20.21 E-value=2e+02 Score=19.11 Aligned_cols=41 Identities=12% Similarity=0.018 Sum_probs=28.0
Q ss_pred HHHHHHHHHhhcCCcEEEEEEEEecCccCchhHHHHhhhhcCceeeE
Q 029314 139 TLSAAIRLLGSFQNHIFILICIQMLNACFSSYILLFSYATNGFTQFT 185 (195)
Q Consensus 139 Tl~~a~~~L~~~Ga~~V~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 185 (195)
-+..+.+.+++.|...+...+. .. +..+..++++.||....
T Consensus 90 Ll~~~~~~~~~~g~~~i~l~v~--~~----n~~a~~~Y~k~GF~~~~ 130 (144)
T 2pdo_A 90 LLNRLEKKLIARGCPKIQINVP--ED----NDMVLGMYERLGYEHAD 130 (144)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEE--SS----CHHHHHHHHHTTCEECS
T ss_pred HHHHHHHHHHHcCCCEEEEEEe--CC----CHHHHHHHHHcCCcccc
Confidence 3455667778889887765543 22 34678889999987653
No 172
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=20.04 E-value=1.7e+02 Score=19.22 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=14.6
Q ss_pred CCCEEEEEeeeccchHHHHHHHHHHhh-cCCc
Q 029314 123 AGERALIVDDLVATGGTLSAAIRLLGS-FQNH 153 (195)
Q Consensus 123 ~Gk~VLLVDDV~tTG~Tl~~a~~~L~~-~Ga~ 153 (195)
.+.+||||||=-.....+ .+.|++ .|..
T Consensus 7 ~~~~iLivdd~~~~~~~l---~~~L~~~~~~~ 35 (143)
T 3cnb_A 7 NDFSILIIEDDKEFADML---TQFLENLFPYA 35 (143)
T ss_dssp --CEEEEECSCHHHHHHH---HHHHHHHCTTC
T ss_pred CCceEEEEECCHHHHHHH---HHHHHhccCcc
Confidence 456788888754444333 334444 5554
Done!