BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029320
MKITGETFKIKTPVKAGEVVKDYPGHVLLESESVKHYGVRAKPLGAEQNLEAKRLYFLVE
LPDVARKEIVPRRVRSGINMSAKDRLESLKLSRRSVSDLSILKPVSSSSSSLPEEGAMRL
KLKLPKAEVEKLMRESNNDAEIAEKIRELCMAKQIHWNNNNNNNNGGGNQGFKAREKRVS
FMPICEGGNQITVAS

High Scoring Gene Products

Symbol, full name Information P value
At17.1
AT2G01340
protein from Arabidopsis thaliana 4.2e-47
AT1G71015 protein from Arabidopsis thaliana 7.5e-41
AT1G66480 protein from Arabidopsis thaliana 8.3e-35
AT5G37840 protein from Arabidopsis thaliana 1.4e-30

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029320
        (195 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2038776 - symbol:At17.1 "AT2G01340" species:37...   493  4.2e-47   1
TAIR|locus:504956263 - symbol:AT1G71015 "AT1G71015" speci...   434  7.5e-41   1
TAIR|locus:2028942 - symbol:AT1G66480 "AT1G66480" species...   377  8.3e-35   1
TAIR|locus:2156035 - symbol:AT5G37840 "AT5G37840" species...   337  1.4e-30   1


>TAIR|locus:2038776 [details] [associations]
            symbol:At17.1 "AT2G01340" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009624 "response to nematode"
            evidence=IEP] GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0009624 HOGENOM:HOG000242814 InterPro:IPR025322 Pfam:PF14009
            EMBL:BT021987 EMBL:BT025275 EMBL:AK226497 IPI:IPI00516747
            RefSeq:NP_178243.2 UniGene:At.13541 UniGene:At.63381
            UniGene:At.70733 EnsemblPlants:AT2G01340.1 GeneID:814662
            KEGG:ath:AT2G01340 TAIR:At2g01340 eggNOG:NOG327687
            InParanoid:Q52K81 OMA:HYGARAK PhylomeDB:Q52K81
            ProtClustDB:CLSN2917975 Genevestigator:Q52K81 Uniprot:Q52K81
        Length = 215

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 117/207 (56%), Positives = 141/207 (68%)

Query:     1 MKITGETFKIKTPVKAGEVVKDYPGHVLLESESVKHYGVRAKPLGAEQNLEAKRLYFLVE 60
             MKI GETFK+KTPV A EV+KD+PGHVLL+SESVKHYG RAKPL A+Q LEAKRLYF+VE
Sbjct:    14 MKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAKQRLEAKRLYFVVE 73

Query:    61 LPDVARKEIVPRRVRSGINMSAKDRLESLKLSRRSVSDLSILKPVXXXXXXLPEEGAMR- 119
              P    KE  PRRVRSGI++SAK+RLESL L+RRS SDLSILKP         EEGA+R 
Sbjct:    74 -PV---KECPPRRVRSGIHVSAKERLESLMLARRSSSDLSILKPPGGWTTE-EEEGAVRR 128

Query:   120 LKLKLPKAEVEKLMRESNNDAEIAEKIRELCMAKQIHW------------XXXXXXXXXX 167
             +K+++PKAE+EKL++E   +AE  +KI  L MAKQ                         
Sbjct:   129 VKVRIPKAELEKLVKEGATEAEATQKIAALFMAKQRQEEAYQNTRQDEPATTATATATTT 188

Query:   168 XXQGFKAREKRVSFMPICEGGNQITVA 194
               +G K+R KRVSFM    GG++ITVA
Sbjct:   189 ATRGVKSRLKRVSFMAERGGGSEITVA 215


>TAIR|locus:504956263 [details] [associations]
            symbol:AT1G71015 "AT1G71015" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC008148
            HOGENOM:HOG000242814 InterPro:IPR025322 Pfam:PF14009 EMBL:BT012172
            EMBL:AK220761 EMBL:AK220604 IPI:IPI00529764 RefSeq:NP_683488.1
            UniGene:At.45168 EnsemblPlants:AT1G71015.1 GeneID:843441
            KEGG:ath:AT1G71015 TAIR:At1g71015 eggNOG:NOG316483
            InParanoid:Q9SSJ7 OMA:RSGIQMS PhylomeDB:Q9SSJ7
            ProtClustDB:CLSN2917910 Genevestigator:Q9SSJ7 Uniprot:Q9SSJ7
        Length = 195

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 90/151 (59%), Positives = 113/151 (74%)

Query:     1 MKITGETFKIKTPVKAGEVVKDYPGHVLLESESVKHYGVRAKPLGAEQNLEAKRLYFLVE 60
             M I GE+FK+KTPV+AG VVKD+PGHVLLESE+VK  G+RAKPL   QNLE+KR+YF+VE
Sbjct:    14 MNINGESFKLKTPVEAGTVVKDFPGHVLLESEAVKRLGIRAKPLEPHQNLESKRIYFMVE 73

Query:    61 LPDVARKEIVPRRVRSGINMSAKDRLESLKLSRRSVSDLSILKPVXXXXXXLPEEGAMRL 120
             LP    KE  PRRVRSGI MSAK+RLE+LKLSRRS SDLS++K          E     +
Sbjct:    74 LPRTW-KERTPRRVRSGIQMSAKERLENLKLSRRSSSDLSVMKKKTEVNDE--EREVSSV 130

Query:   121 KLKLPKAEVEKLMRESNNDAEIAEKIRELCM 151
             KLKLPK ++EKL +ES + ++ + KI +LC+
Sbjct:   131 KLKLPKWKIEKLRKESESGSDFSNKITQLCL 161


>TAIR|locus:2028942 [details] [associations]
            symbol:AT1G66480 "AT1G66480" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005886
            "plasma membrane" evidence=IDA] [GO:0009693 "ethylene biosynthetic
            process" evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005886 EMBL:AC074025 EMBL:BT011775 EMBL:BT012406
            EMBL:AK227786 IPI:IPI00546055 IPI:IPI00867963 RefSeq:NP_176821.2
            UniGene:At.17486 IntAct:Q6NLC8 STRING:Q6NLC8
            EnsemblPlants:AT1G66480.1 GeneID:842966 KEGG:ath:AT1G66480
            TAIR:At1g66480 eggNOG:NOG275238 HOGENOM:HOG000242814
            InParanoid:Q6NLC8 OMA:PERPPGI PhylomeDB:Q6NLC8
            ProtClustDB:CLSN2686948 Genevestigator:Q6NLC8 InterPro:IPR025322
            Pfam:PF14009 Uniprot:Q6NLC8
        Length = 225

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 96/207 (46%), Positives = 130/207 (62%)

Query:     1 MKITGETFKIKTPVKAGEVVKDYPGHVLLESESVKHYGVRAKPLGAEQNLEAKRLYFLVE 60
             MKI GETF+IKTPV A EV  DYPG+VLL+S++VKH+GVR+KPL   Q L+ K+ YFLVE
Sbjct:    15 MKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEPNQTLKPKKTYFLVE 74

Query:    61 LPD-------VARKEIVP-RRVRSGINMSAKDRLESLKLSRRSVSDLSILKPVXXXXXXL 112
             LP        V  +  +P RRV SGI++ AK+RL+ L LSRR+VSD++I +         
Sbjct:    75 LPKLPPETTAVDTENKLPYRRVMSGIHVGAKERLDMLMLSRRTVSDVTIGRSDGGDGFG- 133

Query:   113 PE--EGAMRLKLKLPKAEVEKLMRESNNDAE-IAEKIRELCMAK--QIHWXXXXXXXXXX 167
             PE   G   ++L+LP++++ KLM E+NNDA  IAEKI  + M +  ++            
Sbjct:   134 PELGPGHTSVRLRLPRSQITKLMEENNNDASAIAEKILGIYMERSGELGGGRGGVDGRRE 193

Query:   168 XXQG-FKAREKRVSFMPICEGGNQITV 193
                G  KAREK+VSF    EGG ++ V
Sbjct:   194 LGSGEIKAREKQVSFAG--EGGRELPV 218


>TAIR|locus:2156035 [details] [associations]
            symbol:AT5G37840 "AT5G37840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR
            ProtClustDB:CLSN2686948 InterPro:IPR025322 Pfam:PF14009
            EMBL:BT012530 EMBL:BT014829 IPI:IPI00521938 RefSeq:NP_198600.1
            UniGene:At.30460 PRIDE:Q6NL13 EnsemblPlants:AT5G37840.1
            GeneID:833762 KEGG:ath:AT5G37840 TAIR:At5g37840 eggNOG:NOG273176
            InParanoid:Q6NL13 OMA:CVARDQG PhylomeDB:Q6NL13
            Genevestigator:Q6NL13 Uniprot:Q6NL13
        Length = 214

 Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
 Identities = 87/203 (42%), Positives = 119/203 (58%)

Query:     1 MKITGETFKIKTPVKAGEVVKDYPGHVLLESESVKHYGVRAKPLGAEQNLEAKRLYFLVE 60
             MKI G+ F++KTPV A +  K+YPG VLL+SE+VK  GVRAKPL   Q L+    YFLV+
Sbjct:    15 MKIDGDIFRLKTPVTASDATKEYPGFVLLDSETVKRLGVRAKPLEPNQILKPNHTYFLVD 74

Query:    61 LPDVARKEIVP-RRVRSG-INMSAKDRLESLKLSRRSVSDLSILKPVXXXXXXLPEEGAM 118
             LP V ++  +P RRV SG I++ AK+RLE L LSRR+VSD+   +         PE G  
Sbjct:    75 LPPVDKRNKLPYRRVMSGNIHVGAKERLEMLMLSRRTVSDVGAARSDVVGDG--PELGHT 132

Query:   119 RLKLKLPKAEVEKLMRESNNDAEIAEKIRELCMAKQIHWXXXXXXXXXXXXQG------- 171
             R++L+LP++++ KLM ES++ +E+A KI    M                   G       
Sbjct:   133 RVRLRLPRSQITKLMEESHDASEVAAKIISAYMESSGGIQGGRDNDGLRQRLGIAEINNH 192

Query:   172 FKAREKRVSFMPICEGGN-QITV 193
             +KAREK VSF    +GG  +I V
Sbjct:   193 YKAREKHVSFAE--KGGRGEIVV 213


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.368    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      195       177   0.00084  109 3  11 22  0.44    32
                                                     31  0.50    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  548 (58 KB)
  Total size of DFA:  125 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.41u 0.10s 16.51t   Elapsed:  00:00:02
  Total cpu time:  16.41u 0.10s 16.51t   Elapsed:  00:00:02
  Start:  Fri May 10 15:19:50 2013   End:  Fri May 10 15:19:52 2013

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