Query 029320
Match_columns 195
No_of_seqs 95 out of 105
Neff 3.6
Searched_HMMs 13730
Date Mon Mar 25 18:00:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029320.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029320hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1txoa_ d.219.1.1 (A:) putativ 45.8 10 0.00073 27.9 4.1 31 123-154 191-221 (235)
2 d1zud21 d.15.3.2 (2:2-66) Thia 40.8 3.3 0.00024 26.6 0.4 22 2-23 3-24 (65)
3 d1tygb_ d.15.3.2 (B:) Thiamin 36.6 5.8 0.00042 25.3 1.1 23 1-23 2-25 (65)
4 d1a6qa2 d.219.1.1 (A:2-296) Pr 34.9 18 0.0013 27.9 4.2 31 124-154 244-278 (295)
5 d1dmla2 d.131.1.2 (A:170-319) 33.6 9.5 0.0007 29.1 2.1 17 120-136 7-23 (150)
6 d3cr5x1 a.39.1.2 (X:0-89) Calc 32.5 20 0.0015 24.1 3.6 30 123-152 27-63 (90)
7 d1i27a_ a.4.5.30 (A:) C-termin 31.8 1.8 0.00013 29.8 -2.1 49 11-59 21-71 (73)
8 d1ksoa_ a.39.1.2 (A:) Calcycli 31.5 26 0.0019 23.3 4.0 31 123-153 27-64 (93)
9 d2hj1a1 d.15.3.4 (A:11-87) Hyp 28.9 13 0.00095 25.0 2.0 36 14-53 32-67 (77)
10 d1e8aa_ a.39.1.2 (A:) Calcycli 27.4 33 0.0024 22.7 3.9 29 123-151 26-61 (87)
11 d1j55a_ a.39.1.2 (A:) Calcycli 26.3 18 0.0013 24.6 2.5 29 123-151 27-62 (94)
12 d1c07a_ a.39.1.6 (A:) Eps15 {H 25.7 37 0.0027 22.0 3.9 31 123-153 26-56 (95)
13 d1qlsa_ a.39.1.2 (A:) Calcycli 25.1 21 0.0015 24.4 2.6 31 123-153 27-64 (95)
14 d2jxca1 a.39.1.6 (A:121-215) E 24.3 36 0.0026 22.3 3.6 32 123-154 25-56 (95)
15 d1bf5a3 d.93.1.1 (A:569-710) S 22.0 25 0.0018 26.2 2.6 60 3-62 6-67 (142)
16 d1nyna_ d.235.1.1 (A:) Hypothe 20.2 37 0.0027 24.1 3.1 26 123-148 62-87 (111)
No 1
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=45.81 E-value=10 Score=27.94 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=26.3
Q ss_pred eecHHHHHHHHHhcCChHHHHHHHHHHHHhcc
Q 029320 123 KLPKAEVEKLMRESNNDAEIAEKIRELCMAKQ 154 (195)
Q Consensus 123 rLpKaelekLm~es~d~~eaaekim~l~~~~~ 154 (195)
.|+.+|+.++++. .+..++|++|++....+.
T Consensus 191 ~l~~~ei~~i~~~-~~~~~~a~~Lv~~A~~~g 221 (235)
T d1txoa_ 191 PVSDETILEALQI-PEVAESAHRLIELALRGG 221 (235)
T ss_dssp TSCHHHHHHHHTS-SSHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHhC-CCHHHHHHHHHHHHHhcC
Confidence 4789999999975 589999999999888643
No 2
>d1zud21 d.15.3.2 (2:2-66) Thiamin biosynthesis sulfur carrier protein ThiS {Escherichia coli [TaxId: 562]}
Probab=40.76 E-value=3.3 Score=26.56 Aligned_cols=22 Identities=5% Similarity=0.139 Sum_probs=20.1
Q ss_pred ccccceEEeeccchHhHHhhhC
Q 029320 2 KITGETFKIKTPVKAGEVVKDY 23 (195)
Q Consensus 2 klDG~V~E~k~PitA~eVl~d~ 23 (195)
++||+.+++..+.|+.++|..+
T Consensus 3 ~vNg~~~~~~~~~tl~~ll~~l 24 (65)
T d1zud21 3 LFNDQAMQCAAGQTVHELLEQL 24 (65)
T ss_dssp EETTEEECCCTTCBHHHHHHHH
T ss_pred EECCEEEEcCCCCcHHHHHHHc
Confidence 6899999999999999999864
No 3
>d1tygb_ d.15.3.2 (B:) Thiamin biosynthesis sulfur carrier protein ThiS {Bacillus subtilis [TaxId: 1423]}
Probab=36.60 E-value=5.8 Score=25.27 Aligned_cols=23 Identities=17% Similarity=0.417 Sum_probs=19.9
Q ss_pred CccccceEEeecc-chHhHHhhhC
Q 029320 1 MKITGETFKIKTP-VKAGEVVKDY 23 (195)
Q Consensus 1 MklDG~V~E~k~P-itA~eVl~d~ 23 (195)
+++||+..++..+ .|..++|...
T Consensus 2 I~vNG~~~~~~~~~~tl~~LL~~l 25 (65)
T d1tygb_ 2 LQLNGKDVKWKKDTGTIQDLLASY 25 (65)
T ss_dssp EEETTEEECCSSSCCBHHHHHHHT
T ss_pred EEECCEEEEcCCCcccHHHHHHHc
Confidence 4799999999887 5999999864
No 4
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.91 E-value=18 Score=27.86 Aligned_cols=31 Identities=13% Similarity=0.420 Sum_probs=26.0
Q ss_pred ecHHHHHHHHHh----cCChHHHHHHHHHHHHhcc
Q 029320 124 LPKAEVEKLMRE----SNNDAEIAEKIRELCMAKQ 154 (195)
Q Consensus 124 LpKaelekLm~e----s~d~~eaaekim~l~~~~~ 154 (195)
|+-+|+..++.+ +.+..++|++|++.|..+.
T Consensus 244 l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~g 278 (295)
T d1a6qa2 244 MGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKG 278 (295)
T ss_dssp SCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhcC
Confidence 789998888765 5889999999999998653
No 5
>d1dmla2 d.131.1.2 (A:170-319) UL42 {Human herpesvirus type 1 [TaxId: 10298]}
Probab=33.59 E-value=9.5 Score=29.05 Aligned_cols=17 Identities=18% Similarity=0.591 Sum_probs=13.4
Q ss_pred EEEeecHHHHHHHHHhc
Q 029320 120 LKLKLPKAEVEKLMRES 136 (195)
Q Consensus 120 vKmrLpKaelekLm~es 136 (195)
|-|+|+|+||.|.++-+
T Consensus 7 v~~sLsk~QL~KiL~~~ 23 (150)
T d1dmla2 7 VQLRLTRPQLTKVLNAT 23 (150)
T ss_dssp EEEEECHHHHHHHHHHS
T ss_pred EEEEEcHHHHHHHHHHH
Confidence 67899999998766443
No 6
>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}
Probab=32.48 E-value=20 Score=24.14 Aligned_cols=30 Identities=27% Similarity=0.447 Sum_probs=23.5
Q ss_pred eecHHHHHHHHHh-------cCChHHHHHHHHHHHHh
Q 029320 123 KLPKAEVEKLMRE-------SNNDAEIAEKIRELCMA 152 (195)
Q Consensus 123 rLpKaelekLm~e-------s~d~~eaaekim~l~~~ 152 (195)
.|+|+|+.+||+. .....++..+||+.--.
T Consensus 27 tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~ 63 (90)
T d3cr5x1 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS 63 (90)
T ss_dssp SBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCT
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcC
Confidence 3899999999985 34557789999987543
No 7
>d1i27a_ a.4.5.30 (A:) C-terminal domain of the rap74 subunit of TFIIF {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.83 E-value=1.8 Score=29.75 Aligned_cols=49 Identities=16% Similarity=0.335 Sum_probs=35.6
Q ss_pred eccchHhHHhhhCCCc--eeeccccccccceecccCCCcccccCCceEEEE
Q 029320 11 KTPVKAGEVVKDYPGH--VLLESESVKHYGVRAKPLGAEQNLEAKRLYFLV 59 (195)
Q Consensus 11 k~PitA~eVl~d~PgH--vL~~S~sv~~~Gvr~kpL~pd~eL~~GklYFLv 59 (195)
+.|+|..|+|+-|.+. .+.+.+.|..+.--.+-|.|+..---|++||-+
T Consensus 21 RKPmTt~eLL~Kfk~kkt~ls~eq~V~~la~ILkkinP~k~~i~gK~ylsl 71 (73)
T d1i27a_ 21 RKPMTTKDLLKKFQTKKTGLSSEQTVNVLAQILKRLNPERKMINDKMHFSL 71 (73)
T ss_dssp HSCBCHHHHHHTSCHHHHCCCHHHHHHHHHHHHHHHCCEEEEETTEEEEES
T ss_pred hCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHcChhHhhhcCeEEEEe
Confidence 5799999999999985 334444553333233558899999999999865
No 8
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}
Probab=31.50 E-value=26 Score=23.35 Aligned_cols=31 Identities=19% Similarity=0.177 Sum_probs=22.9
Q ss_pred eecHHHHHHHHHhc-------CChHHHHHHHHHHHHhc
Q 029320 123 KLPKAEVEKLMRES-------NNDAEIAEKIRELCMAK 153 (195)
Q Consensus 123 rLpKaelekLm~es-------~d~~eaaekim~l~~~~ 153 (195)
.|+|+|+.+||+.- +...+...+||+.+-.+
T Consensus 27 ~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n 64 (93)
T d1ksoa_ 27 KLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 64 (93)
T ss_dssp CEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHT
T ss_pred eECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCC
Confidence 48999999999752 23456778888877655
No 9
>d2hj1a1 d.15.3.4 (A:11-87) Hypothetical protein HI0395 {Haemophilus influenzae [TaxId: 727]}
Probab=28.87 E-value=13 Score=24.98 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=27.0
Q ss_pred chHhHHhhhCCCceeeccccccccceecccCCCcccccCC
Q 029320 14 VKAGEVVKDYPGHVLLESESVKHYGVRAKPLGAEQNLEAK 53 (195)
Q Consensus 14 itA~eVl~d~PgHvL~~S~sv~~~Gvr~kpL~pd~eL~~G 53 (195)
|.+..++..||.--+. .. ..|+.-++...|..|+.|
T Consensus 32 i~~Sgi~~~fpeidl~---~~-~vGIfGk~v~~~~~L~~g 67 (77)
T d2hj1a1 32 ITQSGILSQFPEIDLS---TN-KIGIFSRPIKLTDVLKEG 67 (77)
T ss_dssp HHHHTHHHHCTTCCTT---TS-EEEEEECSCCTTCBCCTT
T ss_pred HHHcCcHhhCcccccc---cc-cEeEECcCcCCCCcCCCC
Confidence 3456678889975333 22 469999999999999999
No 10
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=27.39 E-value=33 Score=22.67 Aligned_cols=29 Identities=21% Similarity=0.313 Sum_probs=20.0
Q ss_pred eecHHHHHHHHHh-------cCChHHHHHHHHHHHH
Q 029320 123 KLPKAEVEKLMRE-------SNNDAEIAEKIRELCM 151 (195)
Q Consensus 123 rLpKaelekLm~e-------s~d~~eaaekim~l~~ 151 (195)
-|+|.||.+||+. .....++..+||+..-
T Consensus 26 ~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD 61 (87)
T d1e8aa_ 26 TLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLD 61 (87)
T ss_dssp EECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHC
T ss_pred eEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHc
Confidence 4899999999986 2223455677777644
No 11
>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}
Probab=26.30 E-value=18 Score=24.60 Aligned_cols=29 Identities=28% Similarity=0.365 Sum_probs=20.1
Q ss_pred eecHHHHHHHHHh-------cCChHHHHHHHHHHHH
Q 029320 123 KLPKAEVEKLMRE-------SNNDAEIAEKIRELCM 151 (195)
Q Consensus 123 rLpKaelekLm~e-------s~d~~eaaekim~l~~ 151 (195)
.|+|+|+.+||+. .....++.++||+..-
T Consensus 27 tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD 62 (94)
T d1j55a_ 27 TLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLD 62 (94)
T ss_dssp EECHHHHHHHHHHHSTTCC------CHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence 4899999999985 3334567899998753
No 12
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.70 E-value=37 Score=22.02 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=26.0
Q ss_pred eecHHHHHHHHHhcCChHHHHHHHHHHHHhc
Q 029320 123 KLPKAEVEKLMRESNNDAEIAEKIRELCMAK 153 (195)
Q Consensus 123 rLpKaelekLm~es~d~~eaaekim~l~~~~ 153 (195)
.|+..|+..+|+.++=..+.-++|+++|=.+
T Consensus 26 ~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d 56 (95)
T d1c07a_ 26 FVSGLEVREIFLKTGLPSTLLAHIWSLCDTK 56 (95)
T ss_dssp EECHHHHHHHHHTTTCCHHHHHHHHHHHCTT
T ss_pred CCcHHHHHHHHHhcCCCHHHHHHHHHHhCCC
Confidence 5789999999999987777788999988544
No 13
>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}
Probab=25.13 E-value=21 Score=24.40 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=23.4
Q ss_pred eecHHHHHHHHHh-------cCChHHHHHHHHHHHHhc
Q 029320 123 KLPKAEVEKLMRE-------SNNDAEIAEKIRELCMAK 153 (195)
Q Consensus 123 rLpKaelekLm~e-------s~d~~eaaekim~l~~~~ 153 (195)
.|+|+|+.+||+. +....++.++||+..-.+
T Consensus 27 tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n 64 (95)
T d1qlsa_ 27 KISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLD 64 (95)
T ss_dssp CBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCC
Confidence 4899999999974 444557889999875433
No 14
>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.29 E-value=36 Score=22.27 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=26.8
Q ss_pred eecHHHHHHHHHhcCChHHHHHHHHHHHHhcc
Q 029320 123 KLPKAEVEKLMRESNNDAEIAEKIRELCMAKQ 154 (195)
Q Consensus 123 rLpKaelekLm~es~d~~eaaekim~l~~~~~ 154 (195)
+|+..|+..+|..+.=..+..++|+.+|=.++
T Consensus 25 ~i~~~el~~~l~~~gl~~~~L~~Iw~~~D~~~ 56 (95)
T d2jxca1 25 FLSGDKVKPVLLNSKLPVDILGRVWELSDIDH 56 (95)
T ss_dssp EEEHHHHHHHHTTSSCCHHHHHHHHHHHCTTC
T ss_pred ceeHHHHHHHHHHcCCCHHHHHHHHHHhcCCC
Confidence 48899999999998888888899999987653
No 15
>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.99 E-value=25 Score=26.19 Aligned_cols=60 Identities=17% Similarity=0.113 Sum_probs=44.3
Q ss_pred cccceEEeeccchHhHHhhhCC-Cceeecc-ccccccceecccCCCcccccCCceEEEEecC
Q 029320 3 ITGETFKIKTPVKAGEVVKDYP-GHVLLES-ESVKHYGVRAKPLGAEQNLEAKRLYFLVELP 62 (195)
Q Consensus 3 lDG~V~E~k~PitA~eVl~d~P-gHvL~~S-~sv~~~Gvr~kpL~pd~eL~~GklYFLvPlp 62 (195)
-||.|+=|=.=-.|.++|+.-| |-+|+.. ++....|+-+.-+..++.=...++|.|-|..
T Consensus 6 ~dG~I~GFIsK~~a~~~L~~~~~GTFLLRFSdS~~~GgitiawV~~~~~~~~~~v~~lqP~t 67 (142)
T d1bf5a3 6 NDGCIMGFISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYT 67 (142)
T ss_dssp HTTCCCCCCCHHHHHHHTTTCCSCCCCEEECSSCSSCCEEEEECCCCSSSSCCCCEECCCBC
T ss_pred cCCEEEEEecHHHHHHHhhCCCCceEEEEeccCccCCceEEEEEEecCCCCceeEEeeCCCc
Confidence 4788888877788999998876 7799885 4443467777777776654455688888774
No 16
>d1nyna_ d.235.1.1 (A:) Hypothetical protein Yhr087W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.20 E-value=37 Score=24.14 Aligned_cols=26 Identities=23% Similarity=0.256 Sum_probs=23.5
Q ss_pred eecHHHHHHHHHhcCChHHHHHHHHH
Q 029320 123 KLPKAEVEKLMRESNNDAEIAEKIRE 148 (195)
Q Consensus 123 rLpKaelekLm~es~d~~eaaekim~ 148 (195)
+-++++|++-..-++|..++++.|++
T Consensus 62 ~As~~~L~~~FGT~~d~~~i~~~IL~ 87 (111)
T d1nyna_ 62 AASKAQVENEFGKGKKIEEVIDLILR 87 (111)
T ss_dssp ECCHHHHHHHHCSSCCSHHHHHHHHH
T ss_pred CCCHHHHHHHhCCCCCHHHHHHHHHH
Confidence 46899999999999999999999974
Done!