BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029322
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5PQ59|ALKB6_XENLA Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus
laevis GN=alkbh6 PE=2 SV=1
Length = 240
Score = 136 bits (343), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 105/189 (55%), Gaps = 13/189 (6%)
Query: 1 MEVTENF---NQFTVGNLP-TLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNW 56
M+ NF + F V +P YV ++I+ EE LL +Y AP KW L R+LQNW
Sbjct: 1 MQACHNFPDLDSFLVEKIPLAAYYVPEYISKSEEEYLLRQVYNAPKPKWTQLSGRKLQNW 60
Query: 57 GGVVHEKGLLPQDLPPWLTMITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYF 116
GG+ H +G++ + LP WL T +I + NH+L+NEY +GIMPH+DGP Y+
Sbjct: 61 GGLPHSRGMVQEKLPSWLQKYTDQISSLGVFGDHSANHVLVNEYNAGEGIMPHEDGPMYY 120
Query: 117 PVVAILSLGSPVVMDF-TPHPKLKNNIIPESSNGDAFVTEKNEWKDSHHPFSILLMPRSL 175
P V +SLGS ++DF P N E+ N D + ++ H S+LL PRSL
Sbjct: 121 PTVTTISLGSHTLLDFYVP----INKECQETQNQDKVAST----EEQRHMLSLLLEPRSL 172
Query: 176 LIFKDDAYS 184
L+ +++ Y+
Sbjct: 173 LVVREELYT 181
>sp|Q8K2U2|ALKB6_MOUSE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus
musculus GN=Alkbh6 PE=2 SV=2
Length = 235
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 14/177 (7%)
Query: 10 FTVGNLPTLMY-VADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNWGGVVHEKGLLPQ 68
F V P L+Y V DFI+ EE LL ++ AP KW L R+LQNWGG+ H +G++P+
Sbjct: 14 FRVEQAPPLIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPE 73
Query: 69 DLPPWLTMITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYFPVVAILSLGSPV 128
LPPWL ++ + S NH+L+N+Y P +GIMPH+DGP Y+P V+ +SLGS
Sbjct: 74 RLPPWLQRYVDKVSDLSLFGGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHT 133
Query: 129 VMDFTPHPKLKNNIIPESSNGDAFVTEKNEWKDSHHPF-SILLMPRSLLIFKDDAYS 184
V+DF P+ ++ +P + + P S+L+ PRSLL+ + AY+
Sbjct: 134 VLDFY-EPRQPDDDVP-----------MEQPRPPQRPITSLLVEPRSLLVLRGTAYT 178
>sp|Q6IQE9|ALKB6_DANRE Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio
rerio GN=alkbh6 PE=2 SV=1
Length = 234
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 99/172 (57%), Gaps = 15/172 (8%)
Query: 16 PTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNWGGVVHEKGLLPQDLPPWLT 75
PT+ Y+ DFI+ EE LL +Y AP KW L RRLQNWGG+ + KG+L + LP WL
Sbjct: 21 PTVYYIPDFISEAEEEFLLQQVYRAPKPKWTQLSGRRLQNWGGLPNPKGMLAEKLPDWLL 80
Query: 76 MITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPH 135
T +I NH+L+NEY+P +GIMPH+DGP Y P V +++GS ++DF
Sbjct: 81 EYTEKISALGAFAGKTANHVLVNEYKPGEGIMPHEDGPLYHPTVTTITVGSHTLLDFY-R 139
Query: 136 PKLKNNIIPESSNGDAFVTEKNEWKDSHHPFSILLMPRSLLIFKDDAYSGKC 187
P + + DA TE +S + S+L+ +SLLI +DD Y KC
Sbjct: 140 PVCQ-------AEPDAPQTE-----ESRYMLSLLVQRKSLLILQDDMY--KC 177
>sp|Q3KRA9|ALKB6_HUMAN Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo
sapiens GN=ALKBH6 PE=1 SV=2
Length = 238
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 97/169 (57%), Gaps = 11/169 (6%)
Query: 16 PTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNWGGVVHEKGLLPQDLPPWLT 75
P + YV DFI+ EE LL ++ AP KW L R+LQNWGG+ H +G++P+ LPPWL
Sbjct: 21 PVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQ 80
Query: 76 MITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPH 135
++ S NH+L+N+Y P +GIMPH+DGP Y+P V+ +SLGS V+DF
Sbjct: 81 RYVDKVSNLSLFGGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTVLDFY-E 139
Query: 136 PKLKNNIIPESSNGDAFVTEKNEWKDSHHPFSILLMPRSLLIFKDDAYS 184
P+ + P TE+ S+LL PRSLL+ + AY+
Sbjct: 140 PRRPEDDDP---------TEQPRPPPRPT-TSLLLEPRSLLVLRGPAYT 178
>sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis
GN=alkbh8 PE=2 SV=2
Length = 628
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 16 PTLMYVADFITNIEETQLLNNI-YGAPLSKWKSLKNRRLQNWG-------GVVHEKGLLP 67
P L+ V DF++ +E +L +I + + S KSLK+R+++++G V + LP
Sbjct: 136 PGLIIVEDFVSPEQERTMLESIDWDSETSSQKSLKHRQVKHYGYEFRYDNNNVDKDKPLP 195
Query: 68 QDLPPWLTMITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYFP-VVAILSLGS 126
LP + T R+ ++ GL + + IN+Y+P QGI PH D + F + LSLG+
Sbjct: 196 GGLPDFCTEALRKCVQR-GLIKHDPDQLTINQYEPGQGIPPHVDTHSAFEDEILSLSLGA 254
Query: 127 PVVMDFTPHP 136
+VMDF HP
Sbjct: 255 EIVMDFK-HP 263
>sp|Q5UR03|YL905_MIMIV Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L905 PE=4 SV=1
Length = 210
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 36/187 (19%)
Query: 3 VTENFNQFTVGNLPTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQ--NWGGVV 60
+++ F NL + D++T +E +LL I S+W RRLQ N+ +
Sbjct: 1 MSKKFKMKRAKNLNGFSIIHDYVTPDQEKKLLKKINE---SEWVVDYQRRLQYYNYRNEL 57
Query: 61 HEKGLL---PQDLPPWL-TMITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYF 116
E L P +P +L +I + I +K + + I++NEY+P +G+ PH D Y+
Sbjct: 58 FEPYDLIPIPNKIPKYLDQLINQMILDK--IIDQKPDQIIVNEYKPGEGLKPHFDRKDYY 115
Query: 117 PVVAI-LSLGSPVVMDFTPHPKLKNNIIPESSNGDAFVTEKNEWKDSHHPFSILLMPRSL 175
V I LSLGS +M+F KN IPE I + PRSL
Sbjct: 116 QNVIIGLSLGSGTIMEF-----YKNKPIPEKK-------------------KIYIPPRSL 151
Query: 176 LIFKDDA 182
I KDDA
Sbjct: 152 YIIKDDA 158
>sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8
PE=2 SV=1
Length = 664
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Query: 16 PTLMYVADFITNIEETQLLNNIYGAPLSK----WKSLKNRRLQNWGGVVH-EKGLLPQD- 69
P L + + I++ +E LL ++ ++ KSLK+RR++++G H E + +D
Sbjct: 135 PGLKVIEEIISSEDEKMLLESVNWTEDTENQNFQKSLKHRRVKHFGYEFHYENNNVDKDK 194
Query: 70 -LPPWLTMITRRIYEK---SGLFPSAINHILINEYQPNQGIMPHQDGPAYFPVVAI-LSL 124
LP L I I EK G + + IN+Y+P GI H D + F I LSL
Sbjct: 195 PLPGGLPDICESILEKWLKEGFIKHKPDQLTINQYEPGHGIPAHIDTHSAFEDEIISLSL 254
Query: 125 GSPVVMDFTPHP 136
GS +VMDF HP
Sbjct: 255 GSEIVMDFK-HP 265
>sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus
GN=Alkbh8 PE=2 SV=1
Length = 664
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 46 KSLKNRRLQNWGGVVH-EKGLLPQD--LPPWLTMITRRIYEK---SGLFPSAINHILINE 99
+SLK+RR++++G H E + +D LP L + I EK G + + IN+
Sbjct: 169 RSLKHRRVKHFGYEFHYESNTVDKDKPLPGGLPEVCSSILEKLLKEGYIKHKPDQLTINQ 228
Query: 100 YQPNQGIMPHQDGPAYFPVVAI-LSLGSPVVMDFTPHPK 137
Y+P GI H D + F I LSLGS +VMDF HP+
Sbjct: 229 YEPGHGIPAHIDTHSAFEDEIISLSLGSAIVMDFK-HPE 266
>sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis
GN=ALKBH8 PE=2 SV=1
Length = 664
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 46 KSLKNRRLQNWGGVVH-EKGLLPQD--LPPWLTMITRRIYEK---SGLFPSAINHILINE 99
KSLK+RR++++G H E + +D LP L I EK G + + IN+
Sbjct: 169 KSLKHRRVKHFGYEFHYENNNVDKDKPLPGGLPDICDSFLEKWLREGYIKHKPDQMTINQ 228
Query: 100 YQPNQGIMPHQDGPAYFP-VVAILSLGSPVVMDFTPHP 136
Y+P QGI H D + F + LSLGS +VMDF HP
Sbjct: 229 YEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFK-HP 265
>sp|Q96BT7|ALKB8_HUMAN Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens
GN=ALKBH8 PE=1 SV=2
Length = 664
Score = 47.0 bits (110), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 46 KSLKNRRLQNWGGVVH-EKGLLPQDLP--PWLTMITRRIYEK---SGLFPSAINHILINE 99
KSLK+RR++++G H E + +D P L I EK G + + IN+
Sbjct: 169 KSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKPDQMTINQ 228
Query: 100 YQPNQGIMPHQDGPAYFP-VVAILSLGSPVVMDFTPHP 136
Y+P QGI H D + F + LSLGS +VMDF HP
Sbjct: 229 YEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFK-HP 265
>sp|Q9UT12|YLW2_SCHPO Uncharacterized protein P8A3.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAP8A3.02c PE=3 SV=1
Length = 225
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 95 ILINEYQPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPHPKLK 139
I++ Y P GI+PH+D + VAI S S M FT HP+LK
Sbjct: 118 IIMQVYNPGDGIIPHKDLEMFGDGVAIFSFLSNTTMIFT-HPELK 161
>sp|Q6P1G0|HEAT6_MOUSE HEAT repeat-containing protein 6 OS=Mus musculus GN=Heatr6 PE=2
SV=1
Length = 1184
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 10/61 (16%)
Query: 96 LINEYQPNQGIMPHQDGPAYFPVV---AILSLGSPVVMDFTPHPKLK-------NNIIPE 145
LI +Y+P+ I P Q P + VV A+LS P + HP L+ ++I+PE
Sbjct: 746 LIQQYKPDSNIAPEQRVPVHLVVVFWTAMLSGPLPRALQSAEHPTLQASACDALSSILPE 805
Query: 146 S 146
+
Sbjct: 806 A 806
>sp|Q8XAR3|PGAB_ECO57 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase OS=Escherichia
coli O157:H7 GN=pgaB PE=3 SV=1
Length = 672
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 5 ENFNQFTVGNLPTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNWGGVVHEKG 64
++++ + +P L VA+ + QL N I P +K KS+ + QNW +
Sbjct: 562 KSYDWTAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQAKDKSILELQAQNWQKNGQHQA 621
Query: 65 LLPQDLPPWLTMITRRIYEKSGLFPSAINH 94
+ Q L W++++ + G +P H
Sbjct: 622 ISSQQLAHWMSLLQLNGVKNYGYYPDNFLH 651
>sp|P75906|PGAB_ECOLI Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase OS=Escherichia
coli (strain K12) GN=pgaB PE=1 SV=1
Length = 672
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 40/90 (44%)
Query: 5 ENFNQFTVGNLPTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNWGGVVHEKG 64
++++ + +P L VA+ + QL N I P +K KS+ + QNW +
Sbjct: 562 KSYDWTAIMAMPYLEGVAEKSADQWLIQLTNQIKNIPQAKDKSILELQAQNWQKNGQHQA 621
Query: 65 LLPQDLPPWLTMITRRIYEKSGLFPSAINH 94
+ Q L W++++ + G +P H
Sbjct: 622 ISSQQLAHWMSLLQLNGVKNYGYYPDNFLH 651
>sp|Q6GPB5|ALKB5_XENLA RNA demethylase ALKBH5 OS=Xenopus laevis GN=alkbh5 PE=2 SV=1
Length = 360
Score = 31.6 bits (70), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 69 DLPPWL-TMITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYF--PVVAI 121
++P W+ ++ RR+ E+ + +N +IN+YQP I+ H D F P+V++
Sbjct: 131 EIPGWVHELVIRRLVERRIIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSV 186
>sp|Q66JG8|ALKB5_XENTR RNA demethylase ALKBH5 OS=Xenopus tropicalis GN=alkbh5 PE=2 SV=1
Length = 358
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 69 DLPPWLT-MITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPAYF--PVVAI 121
++P W+ ++ RR+ E + +N +IN+YQP I+ H D F P+V++
Sbjct: 129 EIPAWVNELVIRRLVEHRVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFERPIVSV 184
>sp|Q6F0G6|SYE_MESFL Glutamate--tRNA ligase OS=Mesoplasma florum (strain ATCC 33453 /
NBRC 100688 / NCTC 11704 / L1) GN=gltX PE=3 SV=1
Length = 482
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Query: 12 VGNLPTLM--------YVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNWGGVVHEK 63
+GN T + Y DFI IE+T L N+ GA S++++L NW G+ ++
Sbjct: 18 IGNTRTALMNYLFAKHYNGDFIVRIEDTDLERNVEGAIESQFENL------NWLGINADE 71
Query: 64 GLLP 67
L
Sbjct: 72 SFLK 75
>sp|Q92887|MRP2_HUMAN Canalicular multispecific organic anion transporter 1 OS=Homo sapiens
GN=ABCC2 PE=1 SV=3
Length = 1545
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 26 TNIEETQLLNNIYGAPLSKWKSLKNRRLQN--WGGVVHEKGLLPQDLPPWLT 75
+NI QLLNNI AP+ + + R+ N G + LPQ L W+T
Sbjct: 1053 SNILHKQLLNNILRAPMRFFDTTPTGRIVNRFAGDISTVDDTLPQSLRSWIT 1104
>sp|Q08BA6|ALKB5_DANRE RNA demethylase ALKBH5 OS=Danio rerio GN=alkbh5 PE=2 SV=1
Length = 352
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 38 YGAPLSKWKSLKNRRLQNWGGVVHEKGLLPQDLPPWLTMITRRIYEKSGLFPSA-INHIL 96
YGA L K + RL + G V D+P W+ + G+ P +N +
Sbjct: 109 YGAQLEK-RGPGQERLYSKGEV--------DDIPDWVHELVIDRLVTHGVIPEGFVNSAV 159
Query: 97 INEYQPNQGIMPHQDGPAYF--PVVAI 121
IN+YQP I+ H D F P+V++
Sbjct: 160 INDYQPGGCIVSHVDPIHIFERPIVSV 186
>sp|P49466|RPOB_ODOSI DNA-directed RNA polymerase subunit beta OS=Odontella sinensis
GN=rpoB PE=3 SV=1
Length = 1379
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 7 FNQFTVGNLPTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKN--RRLQNWGGVVHEKG 64
F QFT+ NLP + A F+ N E +++ I +P ++ KN +R Q V+
Sbjct: 92 FGQFTIINLPLMTTTATFVINGCERVIVSQIIRSPGIYFEKNKNHRKRKQFKSQVLGHAS 151
Query: 65 LLPQDLP---PWL 74
L LP PW+
Sbjct: 152 KLGSFLPSGVPWI 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,671,416
Number of Sequences: 539616
Number of extensions: 3426441
Number of successful extensions: 6322
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6299
Number of HSP's gapped (non-prelim): 24
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)