Query 029322
Match_columns 195
No_of_seqs 103 out of 1117
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 18:03:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tht_A Alkylated DNA repair pr 100.0 3.5E-37 1.2E-41 264.9 13.4 161 7-194 101-274 (345)
2 2iuw_A Alkylated repair protei 100.0 1.4E-34 4.9E-39 237.6 12.6 159 14-193 38-214 (238)
3 3s57_A Alpha-ketoglutarate-dep 100.0 1.9E-33 6.6E-38 226.0 13.0 157 16-194 9-188 (204)
4 3i3q_A Alpha-ketoglutarate-dep 100.0 1.1E-29 3.6E-34 205.0 15.7 155 13-194 4-183 (211)
5 2jig_A Prolyl-4 hydroxylase; h 97.8 0.00032 1.1E-08 55.9 12.6 100 13-113 17-118 (224)
6 3dkq_A PKHD-type hydroxylase S 97.7 0.00022 7.6E-09 58.1 9.5 155 16-194 19-182 (243)
7 3itq_A Prolyl 4-hydroxylase, a 97.7 0.0002 6.7E-09 57.4 8.7 156 14-194 37-199 (216)
8 3lfm_A Protein FTO; FAT MASS a 97.6 0.00045 1.5E-08 60.4 10.5 93 91-191 188-300 (495)
9 2hbt_A EGL nine homolog 1; pro 95.2 0.6 2E-05 37.6 13.6 157 16-193 26-200 (247)
10 3kt7_A PKHD-type hydroxylase T 88.2 7.1 0.00024 35.6 12.2 160 17-194 35-214 (633)
11 3nnf_A CURA; non-HAEM Fe(II)/a 75.0 6 0.00021 33.1 6.0 24 17-40 41-64 (344)
12 1odm_A Isopenicillin N synthas 61.9 7.5 0.00026 32.2 4.1 26 165-190 239-264 (331)
13 2rg4_A Uncharacterized protein 60.1 35 0.0012 26.4 7.5 90 92-193 102-192 (216)
14 3oox_A Putative 2OG-Fe(II) oxy 59.5 34 0.0012 27.9 7.7 29 162-190 214-242 (312)
15 4diq_A Lysine-specific demethy 54.0 1.1E+02 0.0036 27.1 10.2 94 70-179 145-241 (489)
16 1w9y_A 1-aminocyclopropane-1-c 41.9 81 0.0028 25.8 7.3 29 162-190 200-228 (319)
17 1gp6_A Leucoanthocyanidin diox 40.5 85 0.0029 26.0 7.3 29 162-190 254-282 (356)
18 2xdv_A MYC-induced nuclear ant 31.5 2.5E+02 0.0085 24.1 9.3 84 74-178 124-211 (442)
19 1dcs_A Deacetoxycephalosporin 30.9 91 0.0031 25.3 5.8 29 162-190 209-237 (311)
20 3on7_A Oxidoreductase, iron/as 30.2 73 0.0025 25.5 5.0 29 162-190 197-225 (280)
21 2opw_A Phyhd1 protein; double- 21.3 70 0.0024 25.2 3.3 23 17-39 16-38 (291)
No 1
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=100.00 E-value=3.5e-37 Score=264.86 Aligned_cols=161 Identities=29% Similarity=0.389 Sum_probs=123.3
Q ss_pred ccccccCCCC-cEEEeCCCCCHHHHHHHHHHHHcCCC----CCceeccCcceeecCcccccCCC-------CCCCCchhh
Q 029322 7 FNQFTVGNLP-TLMYVADFITNIEETQLLNNIYGAPL----SKWKSLKNRRLQNWGGVVHEKGL-------LPQDLPPWL 74 (195)
Q Consensus 7 ~~~~~~~~ip-Gl~~ipdfis~~e~~~L~~~l~~~p~----~~w~~~~~rr~~~~G~~~~~~~~-------~~~~~P~~l 74 (195)
+..+++..+| |++|+|||||++||++|++.|.-.+. ..|.++++||+++||+.|+|++. .+.+||++|
T Consensus 101 ~~~~~~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L 180 (345)
T 3tht_A 101 WKELRPQALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDIC 180 (345)
T ss_dssp EEEEECCSCCTTEEEETTCSCHHHHHHHHTTCC----------------CEEECCC------------------CCCHHH
T ss_pred ccccccccCCCceEEEcCcCCHHHHHHHHHhcccCCccccccCcccccCceEEEECCcccccccccccCCCCCcCcCHHH
Confidence 4455666666 99999999999999999888764321 13667889999999998888653 146799999
Q ss_pred HHHHHHHHHhcCCCCCCcceEEeeeeCCCCCccccCCCCC-CCCeEEEEecCCCeEEEeecCCCCCCCCCCCCCCCCccc
Q 029322 75 TMITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDGPA-YFPVVAILSLGSPVVMDFTPHPKLKNNIIPESSNGDAFV 153 (195)
Q Consensus 75 ~~l~~ri~~~~gl~~~~~n~~liN~Y~~G~~I~~H~D~~~-~~p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~~~~~~~~ 153 (195)
..+++++.+ .++++..||+||||+|++|++|+||+|++. +.+.|++||||++|+|.|++..
T Consensus 181 ~~l~~r~~~-~~~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~~~~~I~slSLG~~~~f~f~~~~----------------- 242 (345)
T 3tht_A 181 ESFLEKWLR-KGYIKHKPDQMTINQYEPGQGIPAHIDTHSAFEDEIVSLSLGSEIVMDFKHPD----------------- 242 (345)
T ss_dssp HHHHHHHHH-HTSCSSCCSEEEEEEECTTCCEEEECCCTTTBCSCEEEEEESSCEEEEEECTT-----------------
T ss_pred HHHHHHHHh-cccCCCCCCEEEEEEecCCCCEeeccCCchhcCCeEEEEECCCceeEEEccCC-----------------
Confidence 999999975 577778999999999999999999999974 4599999999999999999852
Q ss_pred ccccccCCCCccEEEEeCCCeEEeeccccccccccCcCccc
Q 029322 154 TEKNEWKDSHHPFSILLMPRSLLIFKDDAYSGKCLYIDVLV 194 (195)
Q Consensus 154 ~~~~~~~~~~~~~~i~L~~gSLlIm~g~ar~~w~H~Ip~v~ 194 (195)
+..+++.|++||||||+|++|+.|+|+||+++
T Consensus 243 ---------~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~ 274 (345)
T 3tht_A 243 ---------GIAVPVMLPRRSLLVMTGESRYLWTHGITCRK 274 (345)
T ss_dssp ---------SCEEEEEECTTEEEEECTHHHHTSEEEECCCS
T ss_pred ---------CceEEEEcCCCcEEEEChHHhhceEccCCccc
Confidence 34679999999999999999999999999976
No 2
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=100.00 E-value=1.4e-34 Score=237.63 Aligned_cols=159 Identities=21% Similarity=0.297 Sum_probs=125.6
Q ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHcCCCCCceecc----------CcceeecC-cccccCCC--CC-CCCchhhHHHHH
Q 029322 14 NLPTLMYVADFITNIEETQLLNNIYGAPLSKWKSLK----------NRRLQNWG-GVVHEKGL--LP-QDLPPWLTMITR 79 (195)
Q Consensus 14 ~ipGl~~ipdfis~~e~~~L~~~l~~~p~~~w~~~~----------~rr~~~~G-~~~~~~~~--~~-~~~P~~l~~l~~ 79 (195)
.+||++|+|+||+++|++.|++.|.+. .+|.+.. .|++.+|| ..|+|++. .+ .+||++|..+.+
T Consensus 38 ~i~gl~~~~~fl~~~e~~~Ll~~l~~~--~~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~ 115 (238)
T 2iuw_A 38 GVSRVCLYPGFVDVKEADWILEQLCQD--VPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKN 115 (238)
T ss_dssp SCEEEEEETTSSCHHHHHHHHHHHHHH--SCCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCCHHHHHHHH
T ss_pred CCCcEEEECCCCCHHHHHHHHHHHHHh--CCCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCCCHHHHHHHH
Confidence 567899999999999999999999753 3587432 34444557 56777763 22 379999999999
Q ss_pred HHHHhcCCCCCCcceEEeeeeCCCC-CccccCCCCCC-C--CeEEEEecCCCeEEEeecCCCCCCCCCCCCCCCCccccc
Q 029322 80 RIYEKSGLFPSAINHILINEYQPNQ-GIMPHQDGPAY-F--PVVAILSLGSPVVMDFTPHPKLKNNIIPESSNGDAFVTE 155 (195)
Q Consensus 80 ri~~~~gl~~~~~n~~liN~Y~~G~-~I~~H~D~~~~-~--p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 155 (195)
++++..| ..||+||||+|++|+ +|+||+|++.+ . +.||+||||++|+|.|++.....+. ++
T Consensus 116 ~~~~~~g---~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~-------~~----- 180 (238)
T 2iuw_A 116 RIEENTG---HTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEEN-------GD----- 180 (238)
T ss_dssp HHHHHHS---CCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC------------------
T ss_pred HHHHHhC---CCCCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCcccc-------Cc-----
Confidence 9876544 689999999999995 99999999754 3 8999999999999999997421100 00
Q ss_pred ccccCCCCccEEEEeCCCeEEeeccccccccccCcCcc
Q 029322 156 KNEWKDSHHPFSILLMPRSLLIFKDDAYSGKCLYIDVL 193 (195)
Q Consensus 156 ~~~~~~~~~~~~i~L~~gSLlIm~g~ar~~w~H~Ip~v 193 (195)
......++|.|++||||||.|++|+.|+|+||+.
T Consensus 181 ----~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~ 214 (238)
T 2iuw_A 181 ----YTYVERVKIPLDHGTLLIMEGATQADWQHRVPKE 214 (238)
T ss_dssp ------CCCEEEEEECTTCEEEEEETHHHHEEEEECCC
T ss_pred ----ccCCceEEEEcCCCCEEEEChhhhCccEecCCCc
Confidence 0124678999999999999999999999999986
No 3
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=100.00 E-value=1.9e-33 Score=226.02 Aligned_cols=157 Identities=18% Similarity=0.161 Sum_probs=126.6
Q ss_pred Cc-EEEeCCCCCHHHHHHHHHHHHcCCCCCc---ee---------ccCcceeec-C---cccccCCC--CCCCCchhhHH
Q 029322 16 PT-LMYVADFITNIEETQLLNNIYGAPLSKW---KS---------LKNRRLQNW-G---GVVHEKGL--LPQDLPPWLTM 76 (195)
Q Consensus 16 pG-l~~ipdfis~~e~~~L~~~l~~~p~~~w---~~---------~~~rr~~~~-G---~~~~~~~~--~~~~~P~~l~~ 76 (195)
+| -+++|+||+++|++.|+++|.+. .+| ++ ...+|++.| | ..|+|+|. .+.+||++|..
T Consensus 9 ~~~~~~~~~~l~~~~a~~l~~~l~~~--~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~L~~ 86 (204)
T 3s57_A 9 EGLDSSYTVLFGKAEADEIFQELEKE--VEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLER 86 (204)
T ss_dssp TTEEEEEEECSCHHHHHHHHHHHHHH--CCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECCHHHHH
T ss_pred CCceEEecCcCCHHHHHHHHHHHHHh--CCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHHHHH
Confidence 46 67899999999999999999875 578 31 123466666 4 56777774 46789999999
Q ss_pred HHHHHHHhcCCCCCCcceEEeeeeCCCC-CccccCCCCC---CCCeEEEEecCCCeEEEeecCCCCCCCCCCCCCCCCcc
Q 029322 77 ITRRIYEKSGLFPSAINHILINEYQPNQ-GIMPHQDGPA---YFPVVAILSLGSPVVMDFTPHPKLKNNIIPESSNGDAF 152 (195)
Q Consensus 77 l~~ri~~~~gl~~~~~n~~liN~Y~~G~-~I~~H~D~~~---~~p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~~~~~~~ 152 (195)
+.+++++..| ..||+||||+|++|+ +|+||+|++. +.+.||+||||++|+|.|+++..... +
T Consensus 87 l~~~~~~~~g---~~~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~--------~--- 152 (204)
T 3s57_A 87 IRDHVSGVTG---QTFNFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGK--------S--- 152 (204)
T ss_dssp HHHHHHHHHC---CCCSEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSS--------S---
T ss_pred HHHHHHHHhC---CCCceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCcc--------c---
Confidence 9999976555 789999999999997 9999999964 34899999999999999998641100 0
Q ss_pred cccccccCCCCccEEEEeCCCeEEeeccccccccccCcCccc
Q 029322 153 VTEKNEWKDSHHPFSILLMPRSLLIFKDDAYSGKCLYIDVLV 194 (195)
Q Consensus 153 ~~~~~~~~~~~~~~~i~L~~gSLlIm~g~ar~~w~H~Ip~v~ 194 (195)
.......+++.|++|||+||+|++|+.|+|+||+.+
T Consensus 153 ------~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~ 188 (204)
T 3s57_A 153 ------PSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRK 188 (204)
T ss_dssp ------CSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCT
T ss_pred ------cccCCceEEEECCCCCEEEECchhhheeEeeccccC
Confidence 012456789999999999999999999999999875
No 4
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=99.97 E-value=1.1e-29 Score=204.96 Aligned_cols=155 Identities=17% Similarity=0.201 Sum_probs=117.3
Q ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHcCCC-CCce--------eccCccee-----ec-C--cccccCCCC------CCC
Q 029322 13 GNLPTLMYVADFITNIEETQLLNNIYGAPL-SKWK--------SLKNRRLQ-----NW-G--GVVHEKGLL------PQD 69 (195)
Q Consensus 13 ~~ipGl~~ipdfis~~e~~~L~~~l~~~p~-~~w~--------~~~~rr~~-----~~-G--~~~~~~~~~------~~~ 69 (195)
..-||+.++|+|+. ++++.|++++.+.+. .++. .++ .|++ .| + ..|.|++.. ..+
T Consensus 4 ~~~~g~~~~~~~~~-~~~~~l~~~~~~~~~~~p~~~~~~pgg~~~s-~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~~ 81 (211)
T 3i3q_A 4 PLAAGAVILRRFAF-NAAEQLIRDINDVASQSPFRQMVTPGGYTMS-VAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPA 81 (211)
T ss_dssp CCBTTBEEETTTTT-TTHHHHHHHHHHHHHHSCCBCCBCTTSCBCS-SEEEEESSBEEEEETTEEEEESBCTTTSSBCCC
T ss_pred ecCCCCEEECCcCh-HHHHHHHHHHHHHHhcCCCceeEcCCCCcCc-hhhcccccceeecCCCCcCcCCCccCCCCCCCc
Confidence 34579999999998 578899999875210 0111 122 2334 23 1 235555421 355
Q ss_pred CchhhHHHHHHHHHhcCCCCCCcceEEeeeeCCCCCccccCCC-C-CCCCeEEEEecCCCeEEEeecCCCCCCCCCCCCC
Q 029322 70 LPPWLTMITRRIYEKSGLFPSAINHILINEYQPNQGIMPHQDG-P-AYFPVVAILSLGSPVVMDFTPHPKLKNNIIPESS 147 (195)
Q Consensus 70 ~P~~l~~l~~ri~~~~gl~~~~~n~~liN~Y~~G~~I~~H~D~-~-~~~p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~~ 147 (195)
+|++|..+++++.+..|+....||+||||+|++|++|+||+|. + .+.+.|++||||++|+|.|++..
T Consensus 82 ~P~~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~~i~~H~D~~e~~~~~pI~svSLG~~~~f~f~~~~----------- 150 (211)
T 3i3q_A 82 MPQSFHNLCQRAATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK----------- 150 (211)
T ss_dssp CCHHHHHHHHHHHHHTTCTTCCCCEEEEEEECTTCCEEEECCCCCSCTTSCEEEEEEESCEEEEECCSS-----------
T ss_pred hHHHHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCCCcccccCCCccccCCCEEEEECCCCeEEEEeccc-----------
Confidence 7779999999998766654568999999999999999999994 4 35567999999999999999863
Q ss_pred CCCcccccccccCCCCccEEEEeCCCeEEeeccccccccccCcCccc
Q 029322 148 NGDAFVTEKNEWKDSHHPFSILLMPRSLLIFKDDAYSGKCLYIDVLV 194 (195)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~i~L~~gSLlIm~g~ar~~w~H~Ip~v~ 194 (195)
+.+..+++.|++|||+||+|++|+ |+|+|++++
T Consensus 151 -------------~~~~~~~i~L~~GsllvM~G~~r~-~~H~I~~~~ 183 (211)
T 3i3q_A 151 -------------RNDPLKRLLLEHGDVVVWGGESRL-FYHGIQPLK 183 (211)
T ss_dssp -------------TTSCCEEEEECTTCEEEECGGGTT-CCEEECCCC
T ss_pred -------------CCCceEEEECCCCCEEEECchHHc-eEeccCccc
Confidence 134568999999999999999998 999999975
No 5
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=97.83 E-value=0.00032 Score=55.93 Aligned_cols=100 Identities=11% Similarity=0.091 Sum_probs=60.4
Q ss_pred CCCCcEEEeCCCCCHHHHHHHHHHHHcCCC-CCceecc-CcceeecCcccccCCCCCCCCchhhHHHHHHHHHhcCCCCC
Q 029322 13 GNLPTLMYVADFITNIEETQLLNNIYGAPL-SKWKSLK-NRRLQNWGGVVHEKGLLPQDLPPWLTMITRRIYEKSGLFPS 90 (195)
Q Consensus 13 ~~ipGl~~ipdfis~~e~~~L~~~l~~~p~-~~w~~~~-~rr~~~~G~~~~~~~~~~~~~P~~l~~l~~ri~~~~gl~~~ 90 (195)
..-|-+.+++||||++|.+.|++.....-. ..+.... +.. +.-..+.+........-.+....+.+||.+..|+...
T Consensus 17 s~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~-~~~~~R~s~~~~l~~~~~~~~~~i~~ri~~~~gl~~~ 95 (224)
T 2jig_A 17 SWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKS-VDSEIRTSTGTWFAKGEDSVISKIEKRVAQVTMIPLE 95 (224)
T ss_dssp ETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEE-EECSSBCSEEEECCTTCSHHHHHHHHHHHHHHTCCGG
T ss_pred eCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcc-cccCCEEEeeeEecCCCCHHHHHHHHHHHHHhCCCcc
Confidence 345689999999999999999998874200 0111100 000 0000000000011222345677788888877775434
Q ss_pred CcceEEeeeeCCCCCccccCCCC
Q 029322 91 AINHILINEYQPNQGIMPHQDGP 113 (195)
Q Consensus 91 ~~n~~liN~Y~~G~~I~~H~D~~ 113 (195)
....+.++.|.+|+...+|.|..
T Consensus 96 ~~e~~qv~rY~~G~~y~~H~D~~ 118 (224)
T 2jig_A 96 NHEGLQVLHYHDGQKYEPHYDYF 118 (224)
T ss_dssp GBCCCEEEEEETTCCEEEECCSS
T ss_pred cccceEEEecCCCccccCcccCC
Confidence 45568899999999999999974
No 6
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=97.68 E-value=0.00022 Score=58.06 Aligned_cols=155 Identities=17% Similarity=0.229 Sum_probs=85.5
Q ss_pred CcEEEeCCCCCHHHHHHHHHHHHcCCCCCceeccCcceeecCcccccCCCCCCCCchhhHHHHHHHHHhcCCC-------
Q 029322 16 PTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQNWGGVVHEKGLLPQDLPPWLTMITRRIYEKSGLF------- 88 (195)
Q Consensus 16 pGl~~ipdfis~~e~~~L~~~l~~~p~~~w~~~~~rr~~~~G~~~~~~~~~~~~~P~~l~~l~~ri~~~~gl~------- 88 (195)
+++..++||||++|.++|++.+... .|.......- .....+..+...... .+....+.++|....+.-
T Consensus 19 ~~i~~i~dvLs~~Ec~~li~~~e~~---~~~dg~~t~g-~~~~~vr~n~~l~~d-~~~~~~l~~~i~~~l~~~~~f~~~~ 93 (243)
T 3dkq_A 19 GMLIEIPNVFSKQEVSHLREQLDAR---RWIDGNQTSG-AMATTRKRNQQLDKD-DPVAVALGQQIMDRLLAHPQFVSAA 93 (243)
T ss_dssp TTBEEECCSSCHHHHHHHHHHHHTS---CCEEECCCSS-BSSCCCEEEEECCTT-CHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHhhC---CCccCcccCC-CccccceeeeEECCC-CHHHHHHHHHHHHHHccCcchhhcc
Confidence 3799999999999999999999764 4764221110 001111111111111 235677777777544422
Q ss_pred -CCCcceEEeeeeCCCCCccccCCCCCCC-CeEEEEecCCCeEEEeecCCCCCCCCCCCCCCCCcccccccccCCCCccE
Q 029322 89 -PSAINHILINEYQPNQGIMPHQDGPAYF-PVVAILSLGSPVVMDFTPHPKLKNNIIPESSNGDAFVTEKNEWKDSHHPF 166 (195)
Q Consensus 89 -~~~~n~~liN~Y~~G~~I~~H~D~~~~~-p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (195)
+.....+.++.|.+|+...+|.|..... +.- .. -...++.+.=+. ++..+|+++... +.....
T Consensus 94 L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~-~~--~r~~T~~lYLnd-------p~~~~GGetvf~-----~~~~~~ 158 (243)
T 3dkq_A 94 LPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDG-MI--RTDLSATLFLSE-------PENYQGGELVIQ-----DTYGQQ 158 (243)
T ss_dssp CEEEEEEEEEEEECTTCEEEEECBCSEEEETTE-EE--ECCEEEEEECSC-------GGGEEECCEEEE-----ETTEEE
T ss_pred cccccccceEEEECCCCeeccCCCCCCCCCCCc-cc--cceEEEEEEeCC-------CCCCCCceEEEe-----eCCCcE
Confidence 1122338899999999999999986321 100 00 011112221111 111233333221 112356
Q ss_pred EEEeCCCeEEeeccccccccccCcCccc
Q 029322 167 SILLMPRSLLIFKDDAYSGKCLYIDVLV 194 (195)
Q Consensus 167 ~i~L~~gSLlIm~g~ar~~w~H~Ip~v~ 194 (195)
.|..+.|+++++... ..|++.+|.
T Consensus 159 ~V~P~~G~~v~F~s~----~lH~v~pV~ 182 (243)
T 3dkq_A 159 SIKLSAGSLVLYPSS----SLHQVTPVL 182 (243)
T ss_dssp EECCCTTCEEEEETT----SEEEECCEE
T ss_pred EEecCCCEEEEECCC----CeEcCcccc
Confidence 799999999999763 569998874
No 7
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=97.66 E-value=0.0002 Score=57.36 Aligned_cols=156 Identities=12% Similarity=-0.000 Sum_probs=87.8
Q ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHcCCCCCceeccC-cceeecCcccccCCCCCCCCchhhHHHHHHHHHhcCCCCCCc
Q 029322 14 NLPTLMYVADFITNIEETQLLNNIYGAPLSKWKSLKN-RRLQNWGGVVHEKGLLPQDLPPWLTMITRRIYEKSGLFPSAI 92 (195)
Q Consensus 14 ~ipGl~~ipdfis~~e~~~L~~~l~~~p~~~w~~~~~-rr~~~~G~~~~~~~~~~~~~P~~l~~l~~ri~~~~gl~~~~~ 92 (195)
.-|.+.+++||||++|.+.|++..... +....- .....-..+.+ ++..... .+....+.+||....|+.....
T Consensus 37 ~~P~i~~~~~fLs~~Ec~~Li~~a~~~----l~~s~v~~~~~~~~~RtS-~~~wl~~-~~~v~~i~~Ri~~~~gl~~~~~ 110 (216)
T 3itq_A 37 EEPLIVVLGNVLSDEECDELIELSKSK----LARSKVGSSRDVNDIRTS-SGAFLDD-NELTAKIEKRISSIMNVPASHG 110 (216)
T ss_dssp TTTTEEEEESCSCHHHHHHHHHHHHHH----HC--------CCCCGGGT-TCEECCC-CHHHHHHHHHHHHHHTSCGGGB
T ss_pred CCCCEEEECCcCCHHHHHHHHHHhhcc----cccceeccCCccCCcEee-eeEEeCC-cHHHHHHHHHHHHhcCceeccc
Confidence 468999999999999999999877531 221100 00000001111 1211122 6677788889988788643445
Q ss_pred ceEEeeeeCCCCCccccCCCCCCC-CeEEEEecCCCeEEEeecCCCCCCCCCCCCCCCCcccccccccCCCCccEEEEeC
Q 029322 93 NHILINEYQPNQGIMPHQDGPAYF-PVVAILSLGSPVVMDFTPHPKLKNNIIPESSNGDAFVTEKNEWKDSHHPFSILLM 171 (195)
Q Consensus 93 n~~liN~Y~~G~~I~~H~D~~~~~-p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~ 171 (195)
....+..|.+|+...+|.|..... +. -+..++++|--.. ++. .+|++... ....+.|...
T Consensus 111 E~lqv~~Y~~G~~y~~H~D~~~~~~~~-----~~~~R~~T~l~YL-----nd~--~~GGeT~F-------p~~~~~V~P~ 171 (216)
T 3itq_A 111 EGLHILNYEVDQQYKAHYDYFAEHSRS-----AANNRISTLVMYL-----NDV--EEGGETFF-------PKLNLSVHPR 171 (216)
T ss_dssp CCCEEEEECBTCCEEEECSSCCTTSGG-----GGGCEEEEEEEEC-----SCC--SEECCEEE-------TTTTEEECCC
T ss_pred cceeEEEeCCCCccccccCCCcCCCcc-----cCCceEEEEEEec-----ccC--CcCceeEe-------cCCCCEEecC
Confidence 567889999999999999985321 10 0122222222221 000 12222211 2235788888
Q ss_pred CCeEEeecc-----ccccccccCcCccc
Q 029322 172 PRSLLIFKD-----DAYSGKCLYIDVLV 194 (195)
Q Consensus 172 ~gSLlIm~g-----~ar~~w~H~Ip~v~ 194 (195)
.|+++++.. +....-.|+.-+|.
T Consensus 172 ~G~al~f~~~~~~g~~d~~~lH~~~PV~ 199 (216)
T 3itq_A 172 KGMAVYFEYFYQDQSLNELTLHGGAPVT 199 (216)
T ss_dssp TTCEEEEECCCSSHHHHHTTCEEECCEE
T ss_pred CCeEEEEeccCCCCCCCCccccccceec
Confidence 999999864 22234558877763
No 8
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=97.59 E-value=0.00045 Score=60.37 Aligned_cols=93 Identities=17% Similarity=0.143 Sum_probs=55.7
Q ss_pred CcceEEeeeeCCCC---------------CccccCCCCCCC-CeEEEEecCCCeEEEeecCCCCCCCCCCC---CCCCCc
Q 029322 91 AINHILINEYQPNQ---------------GIMPHQDGPAYF-PVVAILSLGSPVVMDFTPHPKLKNNIIPE---SSNGDA 151 (195)
Q Consensus 91 ~~n~~liN~Y~~G~---------------~I~~H~D~~~~~-p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~---~~~~~~ 151 (195)
.+|-.|||+..|-+ .++||.|.-... .+||.-|.-+ ..+..+..++. ..+...
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~~~StVAVY~~sc--------~~~~~~~~~~~~~~~~d~~~ 259 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLVDRSAVAVYSYSC--------EGPEEESEDDSHLEGRDPDI 259 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBCTTCCEEEEEEEC--------CC-------------CCTTS
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccccCcceEEEEeec--------CCccccccccccCCCCCccc
Confidence 69999999998732 478999986433 6777555322 22111111111 111112
Q ss_pred ccccc-cccCCCCccEEEEeCCCeEEeeccccccccccCcC
Q 029322 152 FVTEK-NEWKDSHHPFSILLMPRSLLIFKDDAYSGKCLYID 191 (195)
Q Consensus 152 ~~~~~-~~~~~~~~~~~i~L~~gSLlIm~g~ar~~w~H~Ip 191 (195)
+...- .++.-.-+.+.|+|+.|++|.|-++-...++|+|-
T Consensus 260 W~VglkiawDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~Vl 300 (495)
T 3lfm_A 260 WHVGFKISWDIETPGLAIPLHQGDCYFMLDDLNATHQHCVL 300 (495)
T ss_dssp EEEEEEETTCCSSCEEEEEECTTCEEEECTTHHHHEEEEEE
T ss_pred eeEeeeecccCCCCceeeecCCCCeeeecchhhhhhhhhhh
Confidence 22211 11222457789999999999999999999999874
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=95.25 E-value=0.6 Score=37.56 Aligned_cols=157 Identities=13% Similarity=0.100 Sum_probs=75.3
Q ss_pred CcEEEeCCCCCHHHHHHHHHHHHcCC-CCCceecc-CcceeecCcccc--cCCC---CC-C-CCchh--hHHHHHHHHHh
Q 029322 16 PTLMYVADFITNIEETQLLNNIYGAP-LSKWKSLK-NRRLQNWGGVVH--EKGL---LP-Q-DLPPW--LTMITRRIYEK 84 (195)
Q Consensus 16 pGl~~ipdfis~~e~~~L~~~l~~~p-~~~w~~~~-~rr~~~~G~~~~--~~~~---~~-~-~~P~~--l~~l~~ri~~~ 84 (195)
+|..+++|||++++.+.|++.+.... ...|.... .+ +.-+...+ .+.+ .. . ..+.. +...++.+...
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~--~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~~ 103 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVS--QKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIRH 103 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEE--CCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCcccccccc--ccccccccccccceeeecccccchhHHHHHHHHHHHHHHH
Confidence 38999999999999999999887520 01122100 00 00000000 0000 00 1 12221 33444444432
Q ss_pred ----cCCCCC-CcceEEeeeeCC-CCCccccCCCCCCCC-eEEEEecCCCeEEEeecCCCCCCCCCCCCCCCCccccccc
Q 029322 85 ----SGLFPS-AINHILINEYQP-NQGIMPHQDGPAYFP-VVAILSLGSPVVMDFTPHPKLKNNIIPESSNGDAFVTEKN 157 (195)
Q Consensus 85 ----~gl~~~-~~n~~liN~Y~~-G~~I~~H~D~~~~~p-~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (195)
.|++.. .-..+.+..|.+ |+...+|.|.+.... .++ +++.+.. .++. ...|+.+..-..
T Consensus 104 ln~~lGl~~i~~~~e~~~~~Y~~~G~~y~~H~D~~~~~~R~~T-------~vlYLN~--~w~~-----~~~GG~l~~~~~ 169 (247)
T 2hbt_A 104 CNGKLGSYKINGRTKAMVACYPGNGTGYVRHVDNPNGDGRCVT-------CIYYLNK--DWDA-----KVSGGILRIFPE 169 (247)
T ss_dssp TTTTSTTCCEEEECCEEEEEECSSSCCEEEECSSCSCCSEEEE-------EEEECBT--TCCH-----HHHBCCEEECCT
T ss_pred HhhhcCcccccccceEEEEEecCCCCcccccccCCCCCCceEE-------EEEEeCC--CCCC-----CCCceeEEEecC
Confidence 222210 012367889996 999999999953211 221 2222222 1110 012333221110
Q ss_pred ccCCCCccEEEEeCCCeEEeeccccccccccCcCcc
Q 029322 158 EWKDSHHPFSILLMPRSLLIFKDDAYSGKCLYIDVL 193 (195)
Q Consensus 158 ~~~~~~~~~~i~L~~gSLlIm~g~ar~~w~H~Ip~v 193 (195)
......+|.-..|+|+++..+.+ .| |++.++
T Consensus 170 ---~~~~~~~v~P~~grlv~F~s~~~-~~-H~V~p~ 200 (247)
T 2hbt_A 170 ---GKAQFADIEPKFDRLLFFWSDRR-NP-HEVQPA 200 (247)
T ss_dssp ---TCSSCEEECCBTTEEEEEECSTT-CC-EEECCB
T ss_pred ---CCCceEEEEcCCCEEEEEecCCC-ce-eeeccC
Confidence 11234577777899999986432 24 888764
No 10
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=88.18 E-value=7.1 Score=35.57 Aligned_cols=160 Identities=11% Similarity=0.052 Sum_probs=79.7
Q ss_pred cEEEeCCCCCHHHHHHHHHHHHcCCCCCceeccCccee--ecCcccccCCCCC---CCCchhhHHHHH---------HHH
Q 029322 17 TLMYVADFITNIEETQLLNNIYGAPLSKWKSLKNRRLQ--NWGGVVHEKGLLP---QDLPPWLTMITR---------RIY 82 (195)
Q Consensus 17 Gl~~ipdfis~~e~~~L~~~l~~~p~~~w~~~~~rr~~--~~G~~~~~~~~~~---~~~P~~l~~l~~---------ri~ 82 (195)
--.+|++||+++..+.+.+++... ..|......-.. +-|.--+-.++.. ..+|. +..|++ -+.
T Consensus 35 pH~VIdnfl~d~lle~V~~Efp~~--i~f~~KetDlYk~~QsgdLanl~~l~~e~l~~lp~-l~~Lr~~L~S~~Fr~~Ls 111 (633)
T 3kt7_A 35 NWGTIHELVNDDLLRAVRKEIETE--IHFTKKETDIYRVNQSGDLANLSGLDWDDLSRLPN-LFKLRQILYSKQYRDFFG 111 (633)
T ss_dssp CCEEESSCBCHHHHHHHHHHHHHH--CCCEEEECSSEEEEECCCTTCTTSCCTTCCTTCHH-HHHHHHHHTSHHHHHHHH
T ss_pred ceEEECCCCCHHHHHHHHHHhhhc--cCcccccccccceeccccccccccCChhhhccChH-HHHHHHHHhcHHHHHHHH
Confidence 567899999998888888888632 246543222111 1121111112111 22344 333333 333
Q ss_pred HhcCCCC--CCcceEEeeeeCCCCCccccCCCCCCCCeEEEEecCCCeEEEeec-CCCCCCCCCCCCCCCCcccccccc-
Q 029322 83 EKSGLFP--SAINHILINEYQPNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTP-HPKLKNNIIPESSNGDAFVTEKNE- 158 (195)
Q Consensus 83 ~~~gl~~--~~~n~~liN~Y~~G~~I~~H~D~~~~~p~Ia~lSLgs~~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~- 158 (195)
+.+|+-+ ...-.+.++.|.+|+.+.+|.|... ...|+. ++.|.. ..+|+.. .|+.+..=..+
T Consensus 112 ~iTGi~~Lsg~~~D~~~a~Y~~G~fL~~H~D~~~-~RrvS~-------VLYLN~pd~~W~~e------~GGeL~Lyd~d~ 177 (633)
T 3kt7_A 112 YVTKAGKLSGSKTDMSINTYTKGCHLLTHDDVIG-SRRISF-------ILYLPDPDRKWKSH------YGGGLRLFPSIL 177 (633)
T ss_dssp HHHTCCCCCSSCCCEEEEEECTTCEEEEECCCCT-TEEEEE-------EEECSCTTSCCCGG------GBCCEEECCEEE
T ss_pred HHhCCcccCCCceeEEEEEeCCCCeeeecCCCCC-CeEEEE-------EEEcCCCCCCCCcc------CCceEEEecCCC
Confidence 4456422 1233477899999999999999631 123331 223322 1113221 23333221100
Q ss_pred --cCCCCccEEEEeCCCeEEeeccccccccccCcCccc
Q 029322 159 --WKDSHHPFSILLMPRSLLIFKDDAYSGKCLYIDVLV 194 (195)
Q Consensus 159 --~~~~~~~~~i~L~~gSLlIm~g~ar~~w~H~Ip~v~ 194 (195)
.........|.=..|+|++|.-.-...| |++.+|.
T Consensus 178 ~~~P~~d~~~~I~P~fNrLV~F~vsp~~S~-H~V~eV~ 214 (633)
T 3kt7_A 178 PNVPHSDPSAKLVPQFNQIAFFKVLPGFSF-HDXEEVK 214 (633)
T ss_dssp TTEECSSCSEEECCCTTEEEEEECCTTTCC-EEECCBC
T ss_pred cCCCCCCceEEEecCCCeEEEEEcCCCCCc-CCCCccC
Confidence 0001223455555788988877533447 9988874
No 11
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=75.03 E-value=6 Score=33.09 Aligned_cols=24 Identities=4% Similarity=-0.027 Sum_probs=21.9
Q ss_pred cEEEeCCCCCHHHHHHHHHHHHcC
Q 029322 17 TLMYVADFITNIEETQLLNNIYGA 40 (195)
Q Consensus 17 Gl~~ipdfis~~e~~~L~~~l~~~ 40 (195)
|..++++++|++|-+.+.++++..
T Consensus 41 GYLvlk~vFs~eEv~~l~~el~~~ 64 (344)
T 3nnf_A 41 GYCQIKKIFDFSAIKTIQKTLDQA 64 (344)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCHHHHHHHHHHHHHH
Confidence 889999999999999999998864
No 12
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=61.86 E-value=7.5 Score=32.23 Aligned_cols=26 Identities=12% Similarity=-0.207 Sum_probs=21.8
Q ss_pred cEEEEeCCCeEEeeccccccccccCc
Q 029322 165 PFSILLMPRSLLIFKDDAYSGKCLYI 190 (195)
Q Consensus 165 ~~~i~L~~gSLlIm~g~ar~~w~H~I 190 (195)
.+.+.-.+|+++|.-|++=..|+.|.
T Consensus 239 Wi~V~p~pgalvVNiGD~l~~~TnG~ 264 (331)
T 1odm_A 239 YQDIEADDTGYLINCGSYMAHLTNNY 264 (331)
T ss_dssp EEECCCCTTSEEEEECHHHHHHTTTS
T ss_pred eEECCCCCCeEEEEccHHHHHHhCCE
Confidence 77888889999999999888887764
No 13
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=60.11 E-value=35 Score=26.36 Aligned_cols=90 Identities=9% Similarity=0.045 Sum_probs=50.6
Q ss_pred cceEEeeeeCCCCCccccCCCCCCCCeEEEEecCC-CeEEEeecCCCCCCCCCCCCCCCCcccccccccCCCCccEEEEe
Q 029322 92 INHILINEYQPNQGIMPHQDGPAYFPVVAILSLGS-PVVMDFTPHPKLKNNIIPESSNGDAFVTEKNEWKDSHHPFSILL 170 (195)
Q Consensus 92 ~n~~liN~Y~~G~~I~~H~D~~~~~p~Ia~lSLgs-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L 170 (195)
+..+=+|.|++|+...+|.|.....-.|.=|+... ...+.|........-..+....+.. ........+.-
T Consensus 102 i~~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~--------~~~~~~~~i~P 173 (216)
T 2rg4_A 102 LEDIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAR--------EELRTFRSVAP 173 (216)
T ss_dssp EEEEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSC--------GGGCSEEEECC
T ss_pred EeeEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCc--------ccCCCeeEecC
Confidence 45678899999999999999765555555566642 3356665432100000000000000 00122346777
Q ss_pred CCCeEEeeccccccccccCcCcc
Q 029322 171 MPRSLLIFKDDAYSGKCLYIDVL 193 (195)
Q Consensus 171 ~~gSLlIm~g~ar~~w~H~Ip~v 193 (195)
..|.|+|+-. . ..|++++.
T Consensus 174 ~~G~lvlFpS--~--l~H~V~p~ 192 (216)
T 2rg4_A 174 KVGDVLLWES--W--LRHEVPMN 192 (216)
T ss_dssp CTTEEEEEET--T--SCEEECCC
T ss_pred CCCeEEEECC--C--CEEeccCC
Confidence 8999999943 3 34888763
No 14
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=59.50 E-value=34 Score=27.86 Aligned_cols=29 Identities=17% Similarity=0.056 Sum_probs=23.4
Q ss_pred CCccEEEEeCCCeEEeeccccccccccCc
Q 029322 162 SHHPFSILLMPRSLLIFKDDAYSGKCLYI 190 (195)
Q Consensus 162 ~~~~~~i~L~~gSLlIm~g~ar~~w~H~I 190 (195)
.+..+.+.-.+|+++|.-|++=..|+-|.
T Consensus 214 ~g~W~~V~p~pg~~vVNiGD~l~~~TnG~ 242 (312)
T 3oox_A 214 DGQWLPINPPPGCLVINIGDMLERLTNNV 242 (312)
T ss_dssp TSCEEECCCCSSCEEEEECHHHHHHTTTS
T ss_pred CCcEEECCCCCCeEEEEhHHHHHHHhCCe
Confidence 45678888889999999999887777654
No 15
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=53.99 E-value=1.1e+02 Score=27.06 Aligned_cols=94 Identities=18% Similarity=0.243 Sum_probs=51.9
Q ss_pred CchhhHHHHHHHHHhcCCCCCCcceEEeeeeC-CCC--CccccCCCCCCCCeEEEEecCCCeEEEeecCCCCCCCCCCCC
Q 029322 70 LPPWLTMITRRIYEKSGLFPSAINHILINEYQ-PNQ--GIMPHQDGPAYFPVVAILSLGSPVVMDFTPHPKLKNNIIPES 146 (195)
Q Consensus 70 ~P~~l~~l~~ri~~~~gl~~~~~n~~liN~Y~-~G~--~I~~H~D~~~~~p~Ia~lSLgs~~~~~f~~~~~~~~~~~~~~ 146 (195)
+=+.+..+.+.++...| -.+-+|.|- |++ ++++|.|... .+ .+=+-+.+.+++.+....... -+ .
T Consensus 145 f~p~l~~l~~~Le~~fg------~~v~~N~Y~tp~Gs~g~~pH~D~~D---vF-llQv~G~KrWrL~~P~~~~~~-lp-~ 212 (489)
T 4diq_A 145 FSTTVWQFLAVLQEQFG------SMAGSNVYLTPPNSQGFAPHYDDIE---AF-VLQLEGRKLWRVYRPRAPTEE-LA-L 212 (489)
T ss_dssp TCHHHHHHHHHHHHHHT------SCEEEEEEEECSSBCCSCCBCCSSE---EE-EEEEEECEEEEEECCSSGGGT-TC-S
T ss_pred cChHHHHHHHHHHHHhC------CcccceEEecCCCcccccCccCCcc---eE-EEEEeeEEEEEEeCCCCcccc-CC-C
Confidence 33445667777766655 356678885 333 6889999963 33 355666677777654311100 00 0
Q ss_pred CCCCcccccccccCCCCccEEEEeCCCeEEeec
Q 029322 147 SNGDAFVTEKNEWKDSHHPFSILLMPRSLLIFK 179 (195)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~i~L~~gSLlIm~ 179 (195)
.....+.... .....+++.|.+|++|.+=
T Consensus 213 ~~~~~~~~~~----~~~p~~e~~L~pGDvLYiP 241 (489)
T 4diq_A 213 TSSPNFSQDD----LGEPVLQTVLEPGDLLYFP 241 (489)
T ss_dssp SCCCCCCGGG----CCCCSEEEEECTTCEEEEC
T ss_pred cccccCCccc----ccCcceEEEECCCCEEEEC
Confidence 0111111110 1345679999999977764
No 16
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=41.86 E-value=81 Score=25.76 Aligned_cols=29 Identities=10% Similarity=-0.069 Sum_probs=23.3
Q ss_pred CCccEEEEeCCCeEEeeccccccccccCc
Q 029322 162 SHHPFSILLMPRSLLIFKDDAYSGKCLYI 190 (195)
Q Consensus 162 ~~~~~~i~L~~gSLlIm~g~ar~~w~H~I 190 (195)
++..+.+.-.+|+++|.-|++=..|+.|.
T Consensus 200 ~g~Wi~V~p~pgalvVNiGD~l~~~SnG~ 228 (319)
T 1w9y_A 200 DGQWIDVPPMRHSIVVNLGDQLEVITNGK 228 (319)
T ss_dssp TTEEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred CCeEEEcccCCCcEEEEhHHHHHHHhCCe
Confidence 35677888889999999999888787664
No 17
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=40.54 E-value=85 Score=26.04 Aligned_cols=29 Identities=10% Similarity=-0.025 Sum_probs=23.5
Q ss_pred CCccEEEEeCCCeEEeeccccccccccCc
Q 029322 162 SHHPFSILLMPRSLLIFKDDAYSGKCLYI 190 (195)
Q Consensus 162 ~~~~~~i~L~~gSLlIm~g~ar~~w~H~I 190 (195)
.+..+.+.-.+|+++|.-|++=..|+.|.
T Consensus 254 ~g~Wi~V~p~pgalvVNiGD~l~~~TnG~ 282 (356)
T 1gp6_A 254 EGKWVTAKCVPDSIVMHIGDTLEILSNGK 282 (356)
T ss_dssp TTEEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred CCcEEECcCCCCeEEEEeccHHHHhcCCE
Confidence 35677888889999999999888887764
No 18
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=31.47 E-value=2.5e+02 Score=24.11 Aligned_cols=84 Identities=23% Similarity=0.254 Sum_probs=44.1
Q ss_pred hHHHHHHHHHhcCCCCCCcceEEeeeeC-CCC--CccccCCCCCCCCeEEEEecCCCeEEEeecCC-CCCCCCCCCCCCC
Q 029322 74 LTMITRRIYEKSGLFPSAINHILINEYQ-PNQ--GIMPHQDGPAYFPVVAILSLGSPVVMDFTPHP-KLKNNIIPESSNG 149 (195)
Q Consensus 74 l~~l~~ri~~~~gl~~~~~n~~liN~Y~-~G~--~I~~H~D~~~~~p~Ia~lSLgs~~~~~f~~~~-~~~~~~~~~~~~~ 149 (195)
+..+.+.+....| ..+.+|.|- +++ ++++|.|.. ..+. +=+-+.+.+++.+.. +.... .+.+
T Consensus 124 L~~l~~~l~~~~g------~~~~~n~y~~~~g~~g~~~H~D~~---dvf~-~Qv~G~Krw~l~~p~~pl~~~-~s~d--- 189 (442)
T 2xdv_A 124 LWRIQEKLECYFG------SLVGSNVYITPAGSQGLPPHYDDV---EVFI-LQLEGEKHWRLYHPTVPLARE-YSVE--- 189 (442)
T ss_dssp HHHHHHHHHHHHT------SCCEEEEEEECTTCBCSCSEECSS---EEEE-EEEESCEEEEEECCSSTTCSS-CEEC---
T ss_pred HHHHHHHHHHHhC------CCcccceEECCCCCCCccceECCc---ceEE-EEEEeEEEEEEccCCCCcccc-CCCC---
Confidence 3456666665555 245578885 344 455999975 3343 444445555554432 11100 0000
Q ss_pred CcccccccccCCCCccEEEEeCCCeEEee
Q 029322 150 DAFVTEKNEWKDSHHPFSILLMPRSLLIF 178 (195)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~i~L~~gSLlIm 178 (195)
. +.+ -.....++.|.+|++|.+
T Consensus 190 --~---~~~--~~~~~~~~~L~pGD~LYi 211 (442)
T 2xdv_A 190 --A---EER--IGRPVHEFMLKPGDLLYF 211 (442)
T ss_dssp --C---TTT--SCSCSEEEEECTTCEEEE
T ss_pred --c---hhh--cCCcceEEEECCCcEEEE
Confidence 0 000 013457899999998776
No 19
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=30.92 E-value=91 Score=25.27 Aligned_cols=29 Identities=10% Similarity=-0.062 Sum_probs=23.5
Q ss_pred CCccEEEEeCCCeEEeeccccccccccCc
Q 029322 162 SHHPFSILLMPRSLLIFKDDAYSGKCLYI 190 (195)
Q Consensus 162 ~~~~~~i~L~~gSLlIm~g~ar~~w~H~I 190 (195)
.+..+.+.-.+|+++|.-|++=..|+.|.
T Consensus 209 ~g~W~~V~p~pg~lvVNiGD~l~~~TnG~ 237 (311)
T 1dcs_A 209 GGAFTDLPYRPDAVLVFCGAIATLVTGGQ 237 (311)
T ss_dssp TTEEEECCCCTTCEEEEECHHHHHHTTSC
T ss_pred CCEEEeCcCCCCeEEEEHHHHHHHHhCCc
Confidence 35677888889999999999888887764
No 20
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=30.23 E-value=73 Score=25.47 Aligned_cols=29 Identities=7% Similarity=-0.145 Sum_probs=22.2
Q ss_pred CCccEEEEeCCCeEEeeccccccccccCc
Q 029322 162 SHHPFSILLMPRSLLIFKDDAYSGKCLYI 190 (195)
Q Consensus 162 ~~~~~~i~L~~gSLlIm~g~ar~~w~H~I 190 (195)
.+..+.+.-.+|+++|.-|++=..|+-|.
T Consensus 197 ~g~W~~V~p~pg~~vVNiGD~l~~~Tng~ 225 (280)
T 3on7_A 197 DGSWLDVPSDFGNIIINIGDMLQEASDGY 225 (280)
T ss_dssp TSCEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred CCCEEECcCCCCEEEEEcChHHHHHhCCc
Confidence 35677788889999999998877776553
No 21
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.29 E-value=70 Score=25.17 Aligned_cols=23 Identities=13% Similarity=0.213 Sum_probs=20.6
Q ss_pred cEEEeCCCCCHHHHHHHHHHHHc
Q 029322 17 TLMYVADFITNIEETQLLNNIYG 39 (195)
Q Consensus 17 Gl~~ipdfis~~e~~~L~~~l~~ 39 (195)
|..++++||++++-+.|.+.+..
T Consensus 16 Gyvvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 16 GFLVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp SEEEETTSSCHHHHHHHHHHHHH
T ss_pred CEEEecCCCCHHHHHHHHHHHHH
Confidence 89999999999999898888765
Done!