BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029323
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBL5|PTH2_BOVIN Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2
PE=2 SV=1
Length = 179
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/153 (43%), Positives = 96/153 (62%), Gaps = 12/153 (7%)
Query: 43 FGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSDGDQ-DLKLALVVRQDLKMGSGKIASQ 101
FGML K+ V++ N P + S G+ + K+ LVVR DLKMG GK+A+Q
Sbjct: 37 FGML------PKSSVRETN-----PDTETEASILGESGEYKMILVVRNDLKMGKGKVAAQ 85
Query: 102 CAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVAD 161
C+HAA Y ++ + + LL++WE CGQPK+VV +++ + +L A+ GL ++ D
Sbjct: 86 CSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQD 145
Query: 162 AGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194
AGRTQ++ GS+TVL IGPGP L+D VTG +L
Sbjct: 146 AGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178
>sp|Q9Y3E5|PTH2_HUMAN Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2
PE=1 SV=1
Length = 179
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 101/179 (56%), Gaps = 12/179 (6%)
Query: 23 SLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSD------ 76
SL + + GL +G GM L G + LP+ + ++
Sbjct: 5 SLVMEYLAHPSTLGLAVGVACGMCL-----GWSLRVCFGMLPKSKTSKTHTDTESEASIL 59
Query: 77 GDQ-DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVT 135
GD + K+ LVVR DLKMG GK+A+QC+HAA Y ++ + + +L++WE CGQPK+VV
Sbjct: 60 GDSGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVK 119
Query: 136 CKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194
+++ + L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L
Sbjct: 120 APDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178
>sp|Q8R2Y8|PTH2_MOUSE Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2
PE=2 SV=1
Length = 181
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 77/115 (66%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQ 139
+ K+ LVVR DLKMG GK+A+QC+HAA Y + + +L++WE CGQPK+VV ++
Sbjct: 66 EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDE 125
Query: 140 QEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194
+ +L A+ GL ++ DAGRTQ+ GS+TVL IGPGP L+D VTG +L
Sbjct: 126 DTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180
>sp|O97067|PTH2_DROME Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster
GN=CG1307 PE=2 SV=2
Length = 186
Score = 113 bits (282), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 74/118 (62%)
Query: 78 DQDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCK 137
+ + K+ LVVR DLKMG GKIA+QC H A G Y + LLR WE CG KI V +
Sbjct: 69 NDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVE 128
Query: 138 NQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
++ E+ + + AE L T ++ DAGRTQ+ A SKTVLA+GP + +D VTG +LL
Sbjct: 129 SEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186
>sp|Q976I0|PTH_SULTO Peptidyl-tRNA hydrolase OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=pth PE=3 SV=1
Length = 121
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 74/118 (62%), Gaps = 4/118 (3%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHL----LRKWEQCGQPKIVVTCK 137
K+ +VVR DL MG GKIA+Q AHAA + +++ S L L KW + GQPKIVV
Sbjct: 4 KMVIVVRTDLDMGKGKIAAQVAHAAVSLVLDILNSSNSLWKEWLYKWLEEGQPKIVVKVP 63
Query: 138 NQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+NK +E A LPT ++ DAG+TQ+ G+ T + IGP P LVD +TG +LL
Sbjct: 64 SLDELNKRYEKAIELNLPTTIIQDAGKTQIEPGTITCIGIGPAPVELVDKITGDLKLL 121
>sp|Q877G5|PTH_SULAC Peptidyl-tRNA hydrolase OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=pth PE=3 SV=1
Length = 120
Score = 103 bits (257), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 76/120 (63%), Gaps = 5/120 (4%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD-----RHLLRKWEQCGQPKIVVT 135
+K+A++VR DL MG GKIA+Q AHAA + E++Q + L W GQPKIV+
Sbjct: 1 MKMAVLVRTDLDMGKGKIAAQVAHAAVSLVLEIVQKRSKAEWKEWLEMWINQGQPKIVLK 60
Query: 136 CKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
KN E+ + + A +GLP ++ DAG+TQ+ G+ T IGPGP+ ++D++TG +LL
Sbjct: 61 VKNLDELLEKYNKALQSGLPATIIQDAGKTQIEPGTITCAGIGPGPEEMIDNITGDLKLL 120
>sp|Q980V1|PTH_SULSO Peptidyl-tRNA hydrolase OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=pth PE=1 SV=1
Length = 120
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTC 136
+K+ +VVR D+KMG GKIA+Q AHAA + ++ S+ + L +W GQPKI+V
Sbjct: 2 IKMVIVVRSDIKMGKGKIAAQVAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKV 61
Query: 137 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++LVDS+TG +LL
Sbjct: 62 NSLDEIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLVDSITGDLKLL 120
>sp|Q8U0N0|PTH_PYRFU Peptidyl-tRNA hydrolase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=pth PE=3 SV=1
Length = 119
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 70/114 (61%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQE 141
K +V R DLK+ GK+A Q AH A E + R W + GQ K+VV +N++E
Sbjct: 6 KQVIVARSDLKLSKGKLAVQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKAQNEEE 65
Query: 142 MNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL
Sbjct: 66 LFKLKSEAEKLGLPTALIRDAGLTEIPPGTITVLAIGPGPEEVVDKVTGHLKLL 119
>sp|A4YD82|PTH_METS5 Peptidyl-tRNA hydrolase OS=Metallosphaera sedula (strain ATCC 51363
/ DSM 5348) GN=pth PE=3 SV=1
Length = 117
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 73/117 (62%), Gaps = 2/117 (1%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQ--SDRHLLRKWEQCGQPKIVVTCKN 138
+K+ ++VR D+ MG GKIA+Q AHAA + + M S R L W GQPK+VV +
Sbjct: 1 MKMVVMVRTDINMGKGKIAAQVAHAAVSLVLDCMSRSSWRDWLDSWLHEGQPKVVVKVSS 60
Query: 139 QQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+++ + A + GLPT V++DAGRTQV G+ T IGPGP L+D +TG +LL
Sbjct: 61 LEDLLSRVDKARSQGLPTTVISDAGRTQVEPGTVTCAGIGPGPDDLIDKITGDLKLL 117
>sp|P34222|PTH2_YEAST Peptidyl-tRNA hydrolase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PTH2 PE=1 SV=2
Length = 208
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRH------LLRKWEQCGQPKIV 133
++++ALV+RQDL M GKIA+QC HAA + + + + ++W GQ KI
Sbjct: 87 EVRMALVIRQDLGMTKGKIAAQCCHAALSCFRHIATNPARASYNPIMTQRWLNAGQAKIT 146
Query: 134 VTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQR 193
+ C ++ M++L+ A + G+ V+ DAGRTQ++AGS TVL +GP PK+++D +TG +
Sbjct: 147 LKCPDKFTMDELYAKAISLGVNAAVIHDAGRTQIAAGSATVLGLGPAPKAVLDQITGDLK 206
Query: 194 L 194
L
Sbjct: 207 L 207
>sp|O13830|PTH2_SCHPO Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC19A8.14 PE=1 SV=1
Length = 205
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 101/200 (50%), Gaps = 26/200 (13%)
Query: 22 VSLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQ--VSVSSDGDQ 79
V+ +S P + G V+GF+ G ++ + Y K P+++ VSVS+D D
Sbjct: 6 VNFMISSFPAAVLVGAVVGFMIGRKYSVADASRGYSSKNANKASNPEKESPVSVSNDEDS 65
Query: 80 D------------------------LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQ 115
+ K+ LVVR DL M GKIA+QCAHAA Y
Sbjct: 66 ESETELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASA 125
Query: 116 SDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVL 175
D L+R WE GQ KI + + ++ + L A + GL V+ DAGRTQ+++GS TVL
Sbjct: 126 VDPDLVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVL 185
Query: 176 AIGPGPKSLVDSVTGKQRLL 195
IGPGP S+++ VTG +L
Sbjct: 186 GIGPGPVSVINEVTGSLKLF 205
>sp|C3N851|PTH_SULIY Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=pth PE=3 SV=1
Length = 120
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTC 136
+K+ +VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV
Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKA 61
Query: 137 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL
Sbjct: 62 NSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
>sp|C3NF60|PTH_SULIN Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=pth PE=3 SV=1
Length = 120
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTC 136
+K+ +VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV
Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKA 61
Query: 137 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL
Sbjct: 62 NSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
>sp|C3MYS2|PTH_SULIM Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=pth PE=3 SV=1
Length = 120
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTC 136
+K+ +VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV
Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKA 61
Query: 137 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL
Sbjct: 62 NSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
>sp|C3MJ30|PTH_SULIL Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=pth PE=3 SV=1
Length = 120
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTC 136
+K+ +VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV
Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKA 61
Query: 137 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL
Sbjct: 62 NSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
>sp|C4KJ09|PTH_SULIK Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=pth PE=3 SV=1
Length = 120
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTC 136
+K+ +VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV
Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKA 61
Query: 137 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL
Sbjct: 62 NSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
>sp|C3MZS7|PTH_SULIA Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain M.16.27)
GN=pth PE=3 SV=1
Length = 120
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 75/119 (63%), Gaps = 4/119 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTC 136
+K+ +VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV
Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKA 61
Query: 137 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL
Sbjct: 62 NSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
>sp|Q54ZD0|PTH2_DICDI Probable peptidyl-tRNA hydrolase 2 OS=Dictyostelium discoideum
GN=pth2 PE=3 SV=1
Length = 210
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQ 139
D K LV+R DL M GKI +QC HA+ G + ++ + +LR+WE G KI + ++
Sbjct: 95 DCKQVLVIRTDLGMTKGKIIAQCCHASLGARQKALKDSKKVLRQWENFGCAKITLKANSK 154
Query: 140 QEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194
+E+ L A+ G+ +++V D+G TQ+ +GS TVLA+GP PK VD+VT +L
Sbjct: 155 EELVDLRNKAKELGVVSYLVLDSGHTQIPSGSATVLAVGPAPKEAVDAVTKHLKL 209
>sp|Q9V108|PTH_PYRAB Peptidyl-tRNA hydrolase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=pth PE=3 SV=2
Length = 118
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
K +VVR+DLK+ GK+A Q AH A + + R KW GQ K+VV ++
Sbjct: 4 FKQVIVVRKDLKLSKGKLAVQVAHGAVTAAFKAYKEKREWFEKWFHEGQKKVVVKVESLD 63
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
E+ KL AE LPT ++ DAG T++ G+ TVLAIGPGP ++D VTG +LL
Sbjct: 64 ELFKLKAEAEKLNLPTALIQDAGLTEIPPGTITVLAIGPGPSEIIDKVTGHLKLL 118
>sp|Q5JDB8|PTH_PYRKO Peptidyl-tRNA hydrolase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=pth PE=3 SV=1
Length = 118
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 68/114 (59%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQE 141
K +V R+DLK+ GK A Q AH A + + + W GQ K+VV +N +E
Sbjct: 5 KQVIVARKDLKLSKGKFAVQVAHGAVTAAIKAQKEKPEWFKAWFHEGQKKVVVKAENLEE 64
Query: 142 MNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL
Sbjct: 65 LFKLKAEAEKLGLPTALIKDAGLTEIPPGTVTVLAIGPGPEEVVDKVTGHLKLL 118
>sp|P61414|PTH_HALSA Peptidyl-tRNA hydrolase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=pth PE=3 SV=1
Length = 112
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
+K + R D+ MG GK+A+Q AHA+ Y +D +R+W+ GQ K+VV +++
Sbjct: 1 MKQVIAARTDIGMGQGKLAAQVAHASLNAYE---YTDDRAVRRWKDEGQTKVVVKVGSER 57
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
E+ + E A+ GLPT +++DAGRTQ+ G+ T LAIGP P + VD +TG L
Sbjct: 58 ELYERSEEAKRAGLPTGLISDAGRTQLEPGTPTALAIGPAPDADVDQITGDLSLF 112
>sp|B0R2Y5|PTH_HALS3 Peptidyl-tRNA hydrolase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=pth PE=3 SV=1
Length = 112
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
+K + R D+ MG GK+A+Q AHA+ Y +D +R+W+ GQ K+VV +++
Sbjct: 1 MKQVIAARTDIGMGQGKLAAQVAHASLNAYE---YTDDRAVRRWKDEGQTKVVVKVGSER 57
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
E+ + E A+ GLPT +++DAGRTQ+ G+ T LAIGP P + VD +TG L
Sbjct: 58 ELYERSEEAKRAGLPTGLISDAGRTQLEPGTPTALAIGPAPDADVDQITGDLSLF 112
>sp|A8MBW8|PTH_CALMQ Peptidyl-tRNA hydrolase OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=pth PE=3
SV=1
Length = 120
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 73/116 (62%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQ 139
+ K ++VVR DL+M GK+A Q AHAA E +++ + W GQ KIV+ +
Sbjct: 3 EFKQSIVVRGDLRMSRGKLAVQVAHAAVSAVLEALRNRGDWVNAWVSGGQKKIVLVVDSV 62
Query: 140 QEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+++ +L AE+ GLPT ++ DAG T++ G+ T LAIGPGP+ LV+ VTG +LL
Sbjct: 63 EDLIRLKAKAESLGLPTALIEDAGLTELPPGTVTALAIGPGPEELVNKVTGSLKLL 118
>sp|Q5V1D3|PTH_HALMA Peptidyl-tRNA hydrolase OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=pth PE=3
SV=2
Length = 112
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
+K A+V R D+ MG GK+A+Q AHA+ Y + R + W+ GQ K+V+ ++
Sbjct: 1 MKQAIVARADIGMGEGKLAAQVAHASLSAYEDAGPKPR---KAWKGAGQKKVVLKATSES 57
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 190
E+ +L +VAE GLP VV DAG TQ+ G+ T LA+GP LVD VTG
Sbjct: 58 ELFELADVAEREGLPHAVVRDAGHTQLDPGTVTALAVGPAEDELVDRVTG 107
>sp|B6YTE3|PTH_THEON Peptidyl-tRNA hydrolase OS=Thermococcus onnurineus (strain NA1)
GN=pth PE=3 SV=1
Length = 118
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 70/114 (61%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQE 141
K +V+R+DLK+ GK+A Q AH A ++ + + W GQ K+VV +N++E
Sbjct: 5 KQVMVIRKDLKLSKGKMAVQVAHGAVTAALKVQKEKPEWFKAWFHEGQKKVVVKAENERE 64
Query: 142 MNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ +L AE G+PT ++ DAG T++ G+ T LA+GP P+ LVD VTG +L+
Sbjct: 65 LFELKAHAEKLGIPTALIRDAGLTEIPPGTITCLAVGPAPEELVDKVTGHLKLV 118
>sp|O27732|PTH_METTH Peptidyl-tRNA hydrolase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=pth PE=3 SV=1
Length = 112
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 70/115 (60%), Gaps = 3/115 (2%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
+K ++VR DLKMG GKIA+Q HA+ G + +++ +RKWE G K++V+ +
Sbjct: 1 MKQVIIVRSDLKMGKGKIAAQACHASIGSFK---RTEEDKIRKWELEGSKKVIVSVNSLD 57
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
E+ +++ + G+ ++V DAG TQ+ AG+ T L IGP +D +TG +LL
Sbjct: 58 ELLEIYRAVKEAGISNYLVRDAGHTQIPAGTITCLGIGPDDDEKIDKITGDLKLL 112
>sp|O76387|PTH2_CAEEL Probable peptidyl-tRNA hydrolase 2 OS=Caenorhabditis elegans
GN=C24G6.8 PE=3 SV=1
Length = 316
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 80/130 (61%), Gaps = 3/130 (2%)
Query: 68 QEQVSVSSDGDQDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD--RHLLRKWE 125
+E +V S + K+ LV LKMG+GKIA+Q HA G+Y + M S+ ++ + W
Sbjct: 188 EEMGAVQSVAGRTHKMVLVANMSLKMGTGKIAAQVGHATLGVYRQAMNSENGQNAIAAWT 247
Query: 126 QCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLV 185
+ GQ KIVV ++ +++ L +VA++ G ++V DAG TQ+ AGS+TVL I G V
Sbjct: 248 RHGQVKIVVKGQSTEQLMDLCKVAKDAGCYYYLVQDAGYTQIPAGSRTVLGIF-GTVEQV 306
Query: 186 DSVTGKQRLL 195
DSVTG +LL
Sbjct: 307 DSVTGGLKLL 316
>sp|Q9HLW6|PTH_THEAC Peptidyl-tRNA hydrolase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=pth PE=1 SV=1
Length = 117
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQE 141
K+ + VR+DL MG GKIA+Q AHAA M+ +R + +W GQ KIVV + E
Sbjct: 4 KMVIAVRKDLDMGKGKIAAQVAHAAVTCAIRSMKINRDVFNEWYDEGQRKIVVKVNDLDE 63
Query: 142 MNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ ++ +A++ G+ +V D G TQV G+ T + +GP + +D +TGK +LL
Sbjct: 64 IMEIKRMADSMGIVNEIVQDRGYTQVEPGTITCIGLGPDEEEKLDKITGKYKLL 117
>sp|Q97CB4|PTH_THEVO Peptidyl-tRNA hydrolase OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=pth
PE=3 SV=1
Length = 117
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 68/115 (59%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
+KL + VR+DL MG GKIA+Q AHAA + M+ + + +W GQ KIVV N
Sbjct: 3 VKLVVAVRKDLDMGKGKIAAQVAHAAVSCAIKAMKEKKKIFDEWMDEGQKKIVVKVPNVD 62
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
E+ + + A++ G+ V+ D G TQV G+ T + +GP + +D +TGK +LL
Sbjct: 63 EIYIIKKKADSMGIINEVIQDRGYTQVEPGTVTCIGLGPDYEVYLDDITGKYKLL 117
>sp|C6A1K8|PTH_THESM Peptidyl-tRNA hydrolase OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=pth PE=3 SV=1
Length = 118
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 68/114 (59%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQE 141
K ++VR DLK+ GK+A Q AH A + + + W GQ K+VV ++++E
Sbjct: 5 KQVMIVRSDLKLSKGKLAVQVAHGAVTAAFKAYKEKPEWFKGWFNEGQKKVVVKAESERE 64
Query: 142 MNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ +L AE G+P ++ DAG T++ G+ T LAIGPGP+ +V+ +TG +L+
Sbjct: 65 LFELKAEAEKLGIPNSLIRDAGLTEIPPGTITCLAIGPGPEEIVNKITGNLKLV 118
>sp|A3DMF7|PTH_STAMF Peptidyl-tRNA hydrolase OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=pth PE=3 SV=1
Length = 121
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 78 DQDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCK 137
+ + K ++VR D+KM GK+A Q AHAA E + R +W GQ KIVV
Sbjct: 4 NTEYKQVIIVRTDIKMSKGKLAVQVAHAAVSAAFEAYKKKREWFLEWWATGQKKIVVKGG 63
Query: 138 NQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+++++ K E+A+ LP ++ DAG T++ + T + IGPGP +D +TG +LL
Sbjct: 64 SERDLLKYAEMAKKKDLPVAIIRDAGLTELPPNTLTAVGIGPGPSRKIDEITGDLKLL 121
>sp|O28185|PTH_ARCFU Peptidyl-tRNA hydrolase OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=pth PE=1 SV=1
Length = 115
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
LK +VVR DLK+ GK+A Q AHAA Y ++SD L RKW GQ K+V+ K+ +
Sbjct: 3 LKQVIVVRDDLKLSRGKLAVQVAHAAIIGY---LKSDSSLRRKWLDEGQKKVVLKVKSLE 59
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
E+ + AE+ GL T +V DAG T+V G+ T + IGP + +D VTG LL
Sbjct: 60 ELLGIKHKAESLGLVTGLVQDAGLTEVPPGTITAVVIGPDEERKIDKVTGNLPLL 114
>sp|B9LTP1|PTH_HALLT Peptidyl-tRNA hydrolase OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pth PE=3 SV=1
Length = 112
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
+K A+V R D+ MG GK+A+Q AHA+ Y + + R + +KW+ GQ K+V+ ++
Sbjct: 1 MKQAIVARTDIGMGEGKLAAQVAHASLSAYQD---AGRRVRKKWQGEGQKKVVLKGDSES 57
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 190
++ +L + A+ G+P ++ DAG TQ+ G+ T LA+GP VD VTG
Sbjct: 58 QLFELADKADKEGIPYAIIRDAGHTQLEPGTVTALAVGPARDDTVDRVTG 107
>sp|Q8TKX4|PTH_METAC Peptidyl-tRNA hydrolase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=pth PE=3 SV=1
Length = 115
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQ 139
+ K +V R DLK+ GK A Q AHAA +SD L KW++ GQ KIV+
Sbjct: 3 EYKQCIVTRDDLKLSKGKFAVQVAHAALSAAEWASKSD---LEKWKEGGQKKIVLRVPTI 59
Query: 140 QEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+++ +L E A GLPT ++ DAG T++ AG+ TVL IGP + ++D VT +L+
Sbjct: 60 KDLYELKEKARREGLPTALIQDAGLTEIPAGTVTVLGIGPAKEEVIDKVTRDLKLV 115
>sp|Q60363|PTH_METJA Peptidyl-tRNA hydrolase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=pth PE=1 SV=1
Length = 115
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 68/115 (59%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
+K+ +V+R DL MG GK+ +Q HA + + + + + +W + GQ K+VV +++
Sbjct: 1 MKMVVVIRNDLGMGKGKMVAQGGHAIIEAFLDAKRKNPRAVDEWLREGQKKVVVKVNSEK 60
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
E+ ++ A + GLP ++ DAG TQ+ G+ T +AIGP +D +TG +LL
Sbjct: 61 ELIDIYNKARSEGLPCSIIRDAGHTQLEPGTLTAVAIGPEKDEKIDKITGHLKLL 115
>sp|Q466V4|PTH_METBF Peptidyl-tRNA hydrolase OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=pth PE=3 SV=1
Length = 115
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQ 139
+ K +V R+DLK+ GK A Q AHAA ++D L KW++ GQ KIV+
Sbjct: 3 EYKQCIVTREDLKLSKGKFAVQVAHAAISASEWASKND---LEKWKEGGQKKIVLKVPTL 59
Query: 140 QEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
++ +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D VT +L+
Sbjct: 60 NDLYELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKVTRNLKLV 115
>sp|O74017|PTH_PYRHO Peptidyl-tRNA hydrolase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pth PE=1 SV=1
Length = 121
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%)
Query: 85 LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNK 144
+V R DLK+ GK+A+Q AH A E + R W + GQ K+VV ++++E+ K
Sbjct: 11 IVARADLKLSKGKLAAQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKVESEEELFK 70
Query: 145 LWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
L AE GLP ++ DAG T++ G+ TVLA+GP P+ +VD VTG +LL
Sbjct: 71 LKAEAEKLGLPNALIRDAGLTEIPPGTVTVLAVGPAPEEIVDKVTGNLKLL 121
>sp|Q12WH8|PTH_METBU Peptidyl-tRNA hydrolase OS=Methanococcoides burtonii (strain DSM
6242) GN=pth PE=3 SV=1
Length = 115
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQ 139
+ K +++R DLK+ GK+A Q AHAA +SD L W++ GQ K+V+ +
Sbjct: 3 EYKQCIIIRDDLKLSKGKLAVQVAHAAVSAAEWASRSD---LENWKEGGQKKVVLRVEKL 59
Query: 140 QEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
Q++ +L E A GL T ++ DAG T+++ G+ TVL IGP +D VTG +L+
Sbjct: 60 QDLFELKEKARREGLSTALITDAGLTEIAPGTVTVLGIGPARADYIDKVTGNLKLV 115
>sp|Q8Q0M4|PTH_METMA Peptidyl-tRNA hydrolase OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=pth PE=3 SV=2
Length = 115
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 80 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQ 139
+ K +V R DLK+ GK A Q AHAA + D L KW++ GQ KIV+ +
Sbjct: 3 EYKQCIVTRDDLKLSKGKFAVQVAHAALSAAEWASKGD---LEKWKEGGQKKIVLKVPSI 59
Query: 140 QEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+E+ +L E A GLPT ++ DAG T++ G+ TVL IGP + L+D +T +L+
Sbjct: 60 KELYELKEKARREGLPTALIQDAGLTEIPPGTVTVLGIGPAKEELIDKITKDLKLV 115
>sp|Q8TV04|PTH_METKA Peptidyl-tRNA hydrolase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=pth PE=3 SV=1
Length = 116
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQE 141
K +VVR DLK+ GK+A+Q AHA+ G + +S + +W + GQ K+V+ CK+++E
Sbjct: 3 KQVIVVRGDLKLSRGKLAAQVAHASLGAFLRAKESGAPV-EEWLREGQKKVVLKCKDKEE 61
Query: 142 MNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ +L E+A+ GLP+F+V DAG T++ G+ T L IGP + +D VTG LL
Sbjct: 62 LLELHELAKRRGLPSFLVRDAGLTELEPGTVTCLGIGPEREEEIDRVTGDLPLL 115
>sp|Q18KN8|PTH_HALWD Peptidyl-tRNA hydrolase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=pth PE=3 SV=1
Length = 112
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 15/116 (12%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAA------TGMYAELMQSDRHLLRKWEQCGQPKIVV 134
+K A+V R DL+MG GK+A+Q AHA+ TG +E ++W+ GQ KIV+
Sbjct: 1 MKQAIVARADLRMGKGKLAAQVAHASLSAVEDTGTRSE---------KQWKGGGQKKIVL 51
Query: 135 TCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTG 190
+++++ +L + AE G+P VV DAG TQ+ G+ T +AIGP +D +TG
Sbjct: 52 KANSEKKLFQLADEAERDGIPHAVVRDAGHTQLEPGTVTCIAIGPDSDENIDRITG 107
>sp|A6VJR3|PTH_METM7 Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=pth PE=3 SV=1
Length = 116
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%)
Query: 84 ALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMN 143
A+V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+
Sbjct: 5 AIVIRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELL 64
Query: 144 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
++++ GLP ++ DAGRTQV GS T + IGP + + VT +LL
Sbjct: 65 EIFKNVNIEGLPCSLIRDAGRTQVEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
>sp|A4FYL9|PTH_METM5 Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=pth PE=3 SV=1
Length = 116
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%)
Query: 84 ALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMN 143
A+V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+
Sbjct: 5 AIVIRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELL 64
Query: 144 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
++++ GLP ++ DAGRTQ+ GS T + IGP + + VT +LL
Sbjct: 65 EIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
>sp|A9A6B6|PTH_METM6 Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=pth PE=3 SV=1
Length = 116
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 64/112 (57%)
Query: 84 ALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMN 143
A+V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+
Sbjct: 5 AIVIRNDLKMGKGKMAAQACHASLQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELL 64
Query: 144 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
++++ GLP ++ DAGRTQ+ GS T + IGP + + VT +LL
Sbjct: 65 EIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVTKDLKLL 116
>sp|A6USA3|PTH_METVS Peptidyl-tRNA hydrolase OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=pth PE=3 SV=1
Length = 116
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%)
Query: 84 ALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMN 143
A+V+R DLKMG GK+A+Q HA+ Y + + W GQ K+V+ +++E+
Sbjct: 5 AIVIRNDLKMGKGKMAAQACHASIQAYLHAQKISPSAVMYWMNEGQKKVVLKVNSEKELL 64
Query: 144 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+++ GLP ++ DAG+TQ+ GS T + IGP + + VT +LL
Sbjct: 65 EIFRDVNIDGLPCSLIRDAGKTQIEPGSLTAVGIGPEKEDKISKVTKNLKLL 116
>sp|Q8ZYM4|PTH_PYRAE Peptidyl-tRNA hydrolase OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=pth
PE=3 SV=1
Length = 120
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 80 DLKLALVVRQDLKMGSGKIAS-------QCAHAATGMYAELMQSDRHLLRKWEQCGQPKI 132
D+K+ + +R DLK+ GK A+ +C AA G R L +W + GQ KI
Sbjct: 2 DVKMTIAIRGDLKISCGKAAAQAGHAAVECVLAAMGDAKW-----RKWLDQWLEEGQKKI 56
Query: 133 VVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQ 192
V+T + + +L E A++ GLPT VV DAG T++ G+ T + +GP P LVD VTG
Sbjct: 57 VLTADDAAHLYQLHERAKSLGLPTAVVIDAGLTELPPGTPTAICVGPAPDELVDKVTGSL 116
Query: 193 RL 194
+L
Sbjct: 117 KL 118
>sp|A6UWF5|PTH_META3 Peptidyl-tRNA hydrolase OS=Methanococcus aeolicus (strain Nankai-3
/ ATCC BAA-1280) GN=pth PE=3 SV=1
Length = 116
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 69/114 (60%)
Query: 82 KLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQE 141
K +++R DLKMG GK+ +Q +HA+ + +++ + ++W GQ K+V+ +++E
Sbjct: 3 KQVIILRNDLKMGKGKLVAQGSHASLISFLNTQKNNPSVAKEWLNEGQKKVVLKVNSEKE 62
Query: 142 MNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
+ +++ A G ++ DAG TQ+ +G+ T + IGP + ++ +TGK +LL
Sbjct: 63 LFEVFRDANIDGFSCCLIRDAGHTQIPSGTATAVGIGPDKEEKLEKITGKLKLL 116
>sp|P61234|PTH_METMP Peptidyl-tRNA hydrolase OS=Methanococcus maripaludis (strain S2 /
LL) GN=pth PE=3 SV=1
Length = 116
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 84 ALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMN 143
A+V+R DLKMG GK+A+Q HA+ + + + W GQ K+V+ +++E+
Sbjct: 5 AIVIRNDLKMGKGKMAAQACHASIQAFLHAQKISSSAVSGWMNEGQKKVVLKVNSEKELL 64
Query: 144 KLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
++++ GLP ++ DAGRTQ+ GS T + IGP + + V +LL
Sbjct: 65 EIFKNVNIEGLPCSLIRDAGRTQIEPGSLTAVGIGPEKEEKISKVKKDLKLL 116
>sp|Q9YBD6|PTH_AERPE Peptidyl-tRNA hydrolase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=pth PE=3
SV=1
Length = 124
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 79 QDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQC----GQPKIVV 134
+ K A+VVR+DL MG GK A+Q AHA+ +++S R R+W + GQ K+V+
Sbjct: 4 EGYKQAIVVRRDLGMGRGKAAAQAAHASCEAVFLILESGRPEWRRWLEMWRLQGQAKVVL 63
Query: 135 TCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194
++ E+ +++ A GLP V DAG+TQ+ G+ T A+GP P LVD +TG +L
Sbjct: 64 RVESLAELQEVYSKAVEEGLPASFVRDAGKTQLEPGTPTAAAVGPAPSRLVDRITGGLKL 123
Query: 195 L 195
Sbjct: 124 F 124
>sp|Q9J5H2|V029_FOWPN Putative peptidyl-tRNA hydrolase OS=Fowlpox virus (strain NVSL)
GN=FPV029 PE=3 SV=1
Length = 124
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 81 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQ 140
LK+ V+R DLKM G+I SQC H A Y + + L++W + GQ K V N+
Sbjct: 14 LKMVFVIRDDLKMTKGEIVSQCCHGAISAYEKSKKYSPDYLKRWLKNGQVKETVKVDNEN 73
Query: 141 EMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVT 189
EM + E A G+ ++V + R + + TVL IGP P + +S+T
Sbjct: 74 EMMDIRENATAIGVNYYIVQNDKRQKCN----TVLVIGPAPNYMFESLT 118
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,623,126
Number of Sequences: 539616
Number of extensions: 2780059
Number of successful extensions: 7864
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7783
Number of HSP's gapped (non-prelim): 64
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)