BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029325
         (195 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8ZYH2|ATGT_PYRAE tRNA-guanine(15) transglycosylase OS=Pyrobaculum aerophilum (strain
           ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
           GN=tgtA PE=3 SV=1
          Length = 495

 Score = 31.6 bits (70), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 55  LNYGSAGEDPDEIGEAFFDEGVDGGAIMDDISDDEDDMDSSVDLLIRFLQATFKKVSKRA 114
           L YGS   DPDEI +     G D G I+D   D E+  +S++           ++  +RA
Sbjct: 90  LRYGSVEVDPDEILQFQARIGSDIGVILDLPFDYEEPYESAL--------LKVEETIRRA 141

Query: 115 KKAS 118
           K+AS
Sbjct: 142 KRAS 145


>sp|Q10659|SPO14_SCHPO Membrane glycoprotein spo14 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=spo14 PE=2 SV=1
          Length = 395

 Score = 31.2 bits (69), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 97  DLLIRFLQATFKKVSKRAKKASRSILPAAISPK---LVSFAVDGILLLASLSILKALLEV 153
           D  IRF+     K+S+   K S  +    +SP    LVS + DG+L L  +   K L  V
Sbjct: 278 DCSIRFMSLDLTKLSQ-VYKHSLPVTDMQLSPDSEALVSVSADGLLCLQFVGKFKNLSAV 336

Query: 154 VCSIGGTVFVLILLLRFIWAAISYF 178
                G +  L L+  F+ A + ++
Sbjct: 337 KLEDAGVILRLSLMFPFVLAILYFY 361


>sp|Q52KR2|LRIG2_MOUSE Leucine-rich repeats and immunoglobulin-like domains protein 2
           OS=Mus musculus GN=Lrig2 PE=2 SV=1
          Length = 1054

 Score = 30.8 bits (68), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 14/40 (35%), Positives = 21/40 (52%)

Query: 25  PSPTANLSFHHNRHTNHNKTLSELSICHAQLNYGSAGEDP 64
           PS  ++L   HNR +N N TL   ++   ++NY    E P
Sbjct: 73  PSDISSLDLSHNRLSNWNNTLESQTLQEVKMNYNELTEIP 112


>sp|Q15Q16|FTSW_PSEA6 Lipid II flippase FtsW OS=Pseudoalteromonas atlantica (strain T6c /
           ATCC BAA-1087) GN=ftsW PE=3 SV=1
          Length = 487

 Score = 30.4 bits (67), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 4/42 (9%)

Query: 80  AIMDDISDDEDDMDSSVDLLIRFLQ-ATFKKVSKRAKKASRS 120
           A++DD+ D+E D+DS +D    F Q  + + VS + K+AS+S
Sbjct: 432 AVVDDVQDEEQDIDSIMD---DFAQDESAQTVSHQTKRASKS 470


>sp|O78504|PSBK_GUITH Photosystem II reaction center protein K OS=Guillardia theta
           GN=psbK PE=3 SV=1
          Length = 45

 Score = 30.4 bits (67), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 135 VDGILLLASLSILKALLEVVCSIGGTVFVLILLLRFIWAAISYFQ 179
           ++GIL LA L    A+ + +  +   + V  LLL F+W A   F+
Sbjct: 1   MEGILFLAKLPEAYAIFKPIIDVAPVIPVFFLLLAFVWQAAVGFR 45


>sp|Q68CP4|HGNAT_HUMAN Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens
           GN=HGSNAT PE=1 SV=2
          Length = 663

 Score = 30.4 bits (67), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 8/95 (8%)

Query: 11  IVINLSSAKLDHSSPSPTANLSFHHNRHTNHNKTLSELSICHAQLNYGSAGEDPDEIGEA 70
           +++N+  +       +  A++S  H      N TL E  +C  +  +G  G        +
Sbjct: 111 VLVNVPQSPKAGKPSAAAASVSTQHGSILQLNDTLEEKEVCRLEYRFGEFGN------YS 164

Query: 71  FFDEGVDGGA--IMDDISDDEDDMDSSVDLLIRFL 103
              + +  G   I  D++ +ED +DS++ + I FL
Sbjct: 165 LLVKNIHNGVSEIACDLAVNEDPVDSNLPVSIAFL 199


>sp|O94898|LRIG2_HUMAN Leucine-rich repeats and immunoglobulin-like domains protein 2
           OS=Homo sapiens GN=LRIG2 PE=2 SV=3
          Length = 1065

 Score = 30.4 bits (67), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 15/40 (37%), Positives = 21/40 (52%)

Query: 25  PSPTANLSFHHNRHTNHNKTLSELSICHAQLNYGSAGEDP 64
           P  TA L F HNR +N N +L   ++   ++NY    E P
Sbjct: 74  PPDTAILDFSHNRLSNWNISLESQTLQEVKMNYNELTEIP 113


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.132    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,320,999
Number of Sequences: 539616
Number of extensions: 2515993
Number of successful extensions: 13895
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 13844
Number of HSP's gapped (non-prelim): 77
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)