BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029330
(195 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359490779|ref|XP_002269798.2| PREDICTED: uncharacterized protein LOC100252112 [Vitis vinifera]
gi|302144012|emb|CBI23117.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 113/222 (50%), Gaps = 69/222 (31%)
Query: 9 QAPKSSILALSSDSESCKDSSLLREE----------KEFQFQGKEMDEDAALTGRD---- 54
AP S+ LSSDSESC D+S +RE+ K QF KE D + G++
Sbjct: 100 NAPNHSVWKLSSDSESCPDNSSMREDYIHHEESSVHKTTQFPDKEKDAVLSENGQESLLN 159
Query: 55 ----EKTSVKKVS-----------------------------------------TLTLPL 69
EK+ K+V + LPL
Sbjct: 160 EASKEKSPKKRVKVEDHISSKKKKANSDMKGKGHDDGTELLEEEASDKHTEPQVSSGLPL 219
Query: 70 VISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPS 129
V+SEK+ +KA VECEGESIDLSGDMGAVGRI++ T NH MFLDLKGTIYKTT+VPS
Sbjct: 220 VLSEKVHRSKALVECEGESIDLSGDMGAVGRIVILDTPSRNHEMFLDLKGTIYKTTIVPS 279
Query: 130 RTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
RTFCIVSFG EAKV ++ DF I L +S +Y
Sbjct: 280 RTFCIVSFGQSEAKV-------EAVMNDF---IQLKPQSNVY 311
>gi|224121130|ref|XP_002318505.1| predicted protein [Populus trichocarpa]
gi|222859178|gb|EEE96725.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 81/108 (75%), Gaps = 10/108 (9%)
Query: 64 TLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYK 123
T LPLV+SEK+Q +KA VECEGESIDLSGDMGAVGR+++P T GN M+LDLKGTIY+
Sbjct: 1 TSRLPLVLSEKVQRSKALVECEGESIDLSGDMGAVGRVVIPDTPSGNSEMYLDLKGTIYR 60
Query: 124 TTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
TT+VPSRTFC+VSFG EAK+ I+ DF I L ++S +Y
Sbjct: 61 TTIVPSRTFCVVSFGQSEAKI-------EAIMNDF---IQLKTQSNVY 98
>gi|357464307|ref|XP_003602435.1| DNA-binding protein BIN4 [Medicago truncatula]
gi|355491483|gb|AES72686.1| DNA-binding protein BIN4 [Medicago truncatula]
Length = 416
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 90/136 (66%), Gaps = 16/136 (11%)
Query: 40 QGKEMDEDAALTGRDEKTSVK----KVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDM 95
+GK D D + +DE+T K VS+ LPL++SEK+ TKA VEC+G+SIDLSGDM
Sbjct: 207 KGKGGDGDVEV--KDEETFEKPVEPNVSSSILPLMLSEKVHRTKALVECQGDSIDLSGDM 264
Query: 96 GAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLIL 155
GAVGR+++ + G+ M LDLKGTIYKT+++PSRTFC+VSFG EAK+ I+
Sbjct: 265 GAVGRVIISDSPSGDQEMCLDLKGTIYKTSIIPSRTFCVVSFGQTEAKI-------EAIM 317
Query: 156 VDFPILILLLSKSVIY 171
DF I L S +Y
Sbjct: 318 NDF---IQLNPPSDVY 330
>gi|356507532|ref|XP_003522518.1| PREDICTED: uncharacterized protein LOC100795660 [Glycine max]
Length = 380
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 81/120 (67%), Gaps = 16/120 (13%)
Query: 58 SVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDL 117
+V+ VS+ LPL++SEK+Q TKA +EC+G+SIDLSGDMGAVGRI++ + G+ M LDL
Sbjct: 185 NVRMVSSARLPLMLSEKVQRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMCLDL 244
Query: 118 K------GTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
K GTIYKT++VP RTFC+VSFG EAKV I+ DF I L S +Y
Sbjct: 245 KDFAVISGTIYKTSIVPCRTFCVVSFGQSEAKV-------EAIMNDF---IQLKPHSNVY 294
>gi|240256338|ref|NP_197851.5| DNA-binding protein BIN4 [Arabidopsis thaliana]
gi|332005954|gb|AED93337.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
Length = 451
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 13/118 (11%)
Query: 54 DEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVM 113
D+K S+ LPLV+SEK+ TK VECEG+SIDLSGDMGAVGR++V T G+ M
Sbjct: 259 DQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTT-GD--M 315
Query: 114 FLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
+LDLKGTIYK+T++PSRTFC+V+ G EAK+ I+ DF I L+ +S +Y
Sbjct: 316 YLDLKGTIYKSTIIPSRTFCVVNVGQTEAKI-------EAIMNDF---IQLIPQSNVY 363
>gi|238481371|ref|NP_001154738.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
gi|332005958|gb|AED93341.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
Length = 446
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 13/118 (11%)
Query: 54 DEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVM 113
D+K S+ LPLV+SEK+ TK VECEG+SIDLSGDMGAVGR++V T G+ M
Sbjct: 254 DQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTT-GD--M 310
Query: 114 FLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
+LDLKGTIYK+T++PSRTFC+V+ G EAK+ I+ DF I L+ +S +Y
Sbjct: 311 YLDLKGTIYKSTIIPSRTFCVVNVGQTEAKI-------EAIMNDF---IQLIPQSNVY 358
>gi|238481373|ref|NP_001154739.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
gi|257050999|sp|Q9FLU1.2|BIN4_ARATH RecName: Full=DNA-binding protein BIN4; AltName: Full=Protein
BRASSINOSTEROID INSENSITIVE 4; AltName: Full=Protein
MIDGET
gi|332005959|gb|AED93342.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
Length = 454
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 13/118 (11%)
Query: 54 DEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVM 113
D+K S+ LPLV+SEK+ TK VECEG+SIDLSGDMGAVGR++V T G+ M
Sbjct: 262 DQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTT-GD--M 318
Query: 114 FLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
+LDLKGTIYK+T++PSRTFC+V+ G EAK+ I+ DF I L+ +S +Y
Sbjct: 319 YLDLKGTIYKSTIIPSRTFCVVNVGQTEAKI-------EAIMNDF---IQLIPQSNVY 366
>gi|238481367|ref|NP_001154736.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
gi|238481369|ref|NP_001154737.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
gi|332005956|gb|AED93339.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
gi|332005957|gb|AED93340.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
Length = 450
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 13/118 (11%)
Query: 54 DEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVM 113
D+K S+ LPLV+SEK+ TK VECEG+SIDLSGDMGAVGR++V T G+ M
Sbjct: 258 DQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTT-GD--M 314
Query: 114 FLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
+LDLKGTIYK+T++PSRTFC+V+ G EAK+ I+ DF I L+ +S +Y
Sbjct: 315 YLDLKGTIYKSTIIPSRTFCVVNVGQTEAKI-------EAIMNDF---IQLIPQSNVY 362
>gi|45736025|dbj|BAD13052.1| unknown protein [Oryza sativa Japonica Group]
gi|45736067|dbj|BAD13093.1| unknown protein [Oryza sativa Japonica Group]
Length = 320
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 65/78 (83%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
LPL+I +K+Q +KA +EC+G+SIDLSGD+GAVGRI++ + GN + LDLKGTIYK+T+
Sbjct: 140 LPLIIPDKIQRSKALIECDGDSIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTI 199
Query: 127 VPSRTFCIVSFGHPEAKV 144
VPSRTFC+VS G EAK+
Sbjct: 200 VPSRTFCVVSVGQTEAKI 217
>gi|238481365|ref|NP_001154735.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
gi|332005955|gb|AED93338.1| DNA-binding protein BIN4 [Arabidopsis thaliana]
Length = 432
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 81/118 (68%), Gaps = 13/118 (11%)
Query: 54 DEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVM 113
D+K S+ LPLV+SEK+ TK VECEG+SIDLSGDMGAVGR++V T G+ M
Sbjct: 240 DQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTT-GD--M 296
Query: 114 FLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSKSVIY 171
+LDLKGTIYK+T++PSRTFC+V+ G EAK+ I+ DF I L+ +S +Y
Sbjct: 297 YLDLKGTIYKSTIIPSRTFCVVNVGQTEAKI-------EAIMNDF---IQLIPQSNVY 344
>gi|115444213|ref|NP_001045886.1| Os02g0147700 [Oryza sativa Japonica Group]
gi|113535417|dbj|BAF07800.1| Os02g0147700 [Oryza sativa Japonica Group]
gi|215765268|dbj|BAG86965.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622166|gb|EEE56298.1| hypothetical protein OsJ_05371 [Oryza sativa Japonica Group]
Length = 342
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 65/78 (83%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
LPL+I +K+Q +KA +EC+G+SIDLSGD+GAVGRI++ + GN + LDLKGTIYK+T+
Sbjct: 162 LPLIIPDKIQRSKALIECDGDSIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTI 221
Query: 127 VPSRTFCIVSFGHPEAKV 144
VPSRTFC+VS G EAK+
Sbjct: 222 VPSRTFCVVSVGQTEAKI 239
>gi|218190056|gb|EEC72483.1| hypothetical protein OsI_05847 [Oryza sativa Indica Group]
Length = 342
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 65/78 (83%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
LPL+I +K+Q +KA +EC+G+SIDLSGD+GAVGRI++ + GN + LDLKGTIYK+T+
Sbjct: 162 LPLIIPDKIQRSKALIECDGDSIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTI 221
Query: 127 VPSRTFCIVSFGHPEAKV 144
VPSRTFC+VS G EAK+
Sbjct: 222 VPSRTFCVVSVGQTEAKI 239
>gi|45736061|dbj|BAD13087.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 189
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 65/78 (83%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
LPL+I +K+Q +KA +EC+G+SIDLSGD+GAVGRI++ + GN + LDLKGTIYK+T+
Sbjct: 104 LPLIIPDKIQRSKALIECDGDSIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTI 163
Query: 127 VPSRTFCIVSFGHPEAKV 144
VPSRTFC+VS G EAKV
Sbjct: 164 VPSRTFCVVSVGQTEAKV 181
>gi|357138685|ref|XP_003570920.1| PREDICTED: uncharacterized protein LOC100821932 [Brachypodium
distachyon]
Length = 358
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%), Gaps = 7/92 (7%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
LPL+I++K+Q +KA VEC+G+SIDLSGD+GAVGRI++ GN + LDLKGT+YK+T+
Sbjct: 178 LPLMITDKVQRSKALVECDGDSIDLSGDIGAVGRIVISNGPTGNQDLLLDLKGTVYKSTI 237
Query: 127 VPSRTFCIVSFGHPEAKVCCKSSPFSLILVDF 158
VPSRTFC+VS G EAK+ I+ DF
Sbjct: 238 VPSRTFCVVSVGQTEAKI-------EAIMNDF 262
>gi|218189675|gb|EEC72102.1| hypothetical protein OsI_05068 [Oryza sativa Indica Group]
Length = 473
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 65/78 (83%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
LPL+I +K+Q +KA +EC+G+SIDLSGD+GAVGRI++ + GN + LDLKGTIYK+T+
Sbjct: 293 LPLIIPDKVQRSKALIECDGDSIDLSGDVGAVGRIVISNSPNGNQDLLLDLKGTIYKSTI 352
Query: 127 VPSRTFCIVSFGHPEAKV 144
VPSRTFC+VS G EAK+
Sbjct: 353 VPSRTFCVVSVGQTEAKI 370
>gi|449459184|ref|XP_004147326.1| PREDICTED: uncharacterized protein LOC101208657 [Cucumis sativus]
Length = 391
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 73/106 (68%), Gaps = 8/106 (7%)
Query: 62 VSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTI 121
VS+ LPLV+S+K KA VECEG SIDLSGDMGAVGR++V ++ + + LDLKGT+
Sbjct: 207 VSSSRLPLVLSDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGTL 266
Query: 122 YKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDFPILILLLSK 167
Y+ +VPSRTFCIVSFG EAK+ I+ DF I + LSK
Sbjct: 267 YRAVIVPSRTFCIVSFGQSEAKI-------ESIMNDF-IQLKALSK 304
>gi|413935594|gb|AFW70145.1| hypothetical protein ZEAMMB73_185491 [Zea mays]
Length = 354
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%), Gaps = 7/92 (7%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
LPL+ +K+Q +KA +EC+G+SIDLSGD+GAVGRI+V + LDLKGTIYKTT+
Sbjct: 183 LPLIFPDKVQRSKALIECDGDSIDLSGDIGAVGRIVVSNGPTAKQDLLLDLKGTIYKTTI 242
Query: 127 VPSRTFCIVSFGHPEAKVCCKSSPFSLILVDF 158
VPSRTFC+VS G EAK+ I+ DF
Sbjct: 243 VPSRTFCVVSVGQSEAKI-------EAIMNDF 267
>gi|195625200|gb|ACG34430.1| hypothetical protein [Zea mays]
gi|413935593|gb|AFW70144.1| hypothetical protein ZEAMMB73_185491 [Zea mays]
Length = 364
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 94/175 (53%), Gaps = 35/175 (20%)
Query: 11 PKSSILALSSDSESCKDSSLLREEKEFQFQG---------------KEMDEDAALTGRDE 55
PK ++ LSS S++ +SL R ++ +G K+ + TG D+
Sbjct: 101 PKKDMVTLSSGSDASPGNSLSRAHEDNHEEGSLSTAKRKNAQQTKTKKTKDAGTKTGADQ 160
Query: 56 ------------KTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILV 103
K + VS LPL+ +K+Q +KA +EC+G+SIDLSGD+GAVGRI+V
Sbjct: 161 AGNGDAEDDVQDKLTGNSVSQR-LPLIFPDKVQRSKALIECDGDSIDLSGDIGAVGRIVV 219
Query: 104 PGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVDF 158
+ LDLKGTIYKTT+VPSRTFC+VS G EAK+ I+ DF
Sbjct: 220 SNGPTAKQDLLLDLKGTIYKTTIVPSRTFCVVSVGQSEAKIEA-------IMNDF 267
>gi|297812657|ref|XP_002874212.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320049|gb|EFH50471.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 492
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 90/149 (60%), Gaps = 24/149 (16%)
Query: 34 EKEFQFQGKEMDEDAALTGR-DEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLS 92
+K F+ + K+ D A G D+K S+ LPLV+SEK+ TK VECEG+SIDLS
Sbjct: 269 QKIFKSEDKDTDTTIAEEGTMDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLS 328
Query: 93 GDMGAVGRILVPGTAEGNHVMFLDLK----------GTIYKTTLVPSRTFCIVSFGHPEA 142
GDMGAVGR++V T G+ M+LDLK GTIYK+T++PSRTFC+V+ G EA
Sbjct: 329 GDMGAVGRVVVSDTT-GD--MYLDLKGINTFSFHVSGTIYKSTIIPSRTFCVVNVGQTEA 385
Query: 143 KVCCKSSPFSLILVDFPILILLLSKSVIY 171
K+ I+ DF I L +S +Y
Sbjct: 386 KIEA-------IMNDF---IQLTPQSNVY 404
>gi|297598587|ref|NP_001045881.2| Os02g0147100 [Oryza sativa Japonica Group]
gi|255670601|dbj|BAF07795.2| Os02g0147100, partial [Oryza sativa Japonica Group]
Length = 126
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 54/65 (83%)
Query: 80 AFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGH 139
A +EC+G+SIDLSGD+GAVGRI++ + GN + LDLKGTIYK+T+VPSRTFC+VS G
Sbjct: 1 ALIECDGDSIDLSGDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTIVPSRTFCVVSVGQ 60
Query: 140 PEAKV 144
EAK+
Sbjct: 61 TEAKI 65
>gi|168010889|ref|XP_001758136.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690592|gb|EDQ76958.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 77/120 (64%), Gaps = 5/120 (4%)
Query: 40 QGKEMDEDAALTGRDEKTSVKKVSTL--TLPLVISEKLQLTKAFVECEGESIDLSGDMGA 97
Q +E+DE AL ++++ +K ++ +LP+V EK+ TK +ECEG+++DLSGDMGA
Sbjct: 147 QTQEVDEGDALETQEQERRIKPRASAASSLPIVFGEKVNKTKVLLECEGDALDLSGDMGA 206
Query: 98 VGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILVD 157
VGR V ++ + LDLKG IYKTT+VPS TF +V+ G +AKV S F + D
Sbjct: 207 VGRFTV---NRRDNELLLDLKGVIYKTTIVPSNTFFLVNVGQTDAKVESIMSDFVQLRAD 263
>gi|168037576|ref|XP_001771279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677368|gb|EDQ63839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 379
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 12/122 (9%)
Query: 39 FQGKEMDEDAALTGRDEKTSVKK--VSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMG 96
F+ +E DE AL ++++ K ++ +LP+V EK+ TK +ECEG+++DLSGDMG
Sbjct: 154 FRAQETDEGDALEVQEQERHSKPRVIAASSLPIVFGEKVNRTKVLLECEGDALDLSGDMG 213
Query: 97 AVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLILV 156
AVGR V + + LDLKG +YKTT+VPS T+ +V+ G EAKV I+
Sbjct: 214 AVGRFTV---NRPDDELLLDLKGVVYKTTIVPSNTYFVVNVGQMEAKVES-------IMT 263
Query: 157 DF 158
DF
Sbjct: 264 DF 265
>gi|255544304|ref|XP_002513214.1| conserved hypothetical protein [Ricinus communis]
gi|223547712|gb|EEF49205.1| conserved hypothetical protein [Ricinus communis]
Length = 155
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 10/77 (12%)
Query: 95 MGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKVCCKSSPFSLI 154
MGAVGR+++P + GNH M+LDLKGTIY+T +VPSRTFC+VSFG EAK+ I
Sbjct: 1 MGAVGRVVIPDGSSGNHEMYLDLKGTIYRTKIVPSRTFCVVSFGQSEAKI-------EAI 53
Query: 155 LVDFPILILLLSKSVIY 171
+ DF I L ++S +Y
Sbjct: 54 MNDF---IQLKAQSNVY 67
>gi|410129774|dbj|BAM64852.1| hypothetical protein [Beta vulgaris]
Length = 467
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 75/144 (52%), Gaps = 35/144 (24%)
Query: 10 APKSSILALSSDSESCKDSSLLR-EEK-----------------------EFQFQGKEMD 45
AP SI LSSDSE+ D+++ + EEK E K +
Sbjct: 242 APNHSICELSSDSETKSDATIRKIEEKIDNEESAPRSAVKRKSPKKRVKQEDDATEKRTN 301
Query: 46 EDAALTG-----------RDEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGD 94
E A + G + EK S VS+ T+PLV+ EK+Q TKA VECEGESIDLSGD
Sbjct: 302 EPAKIEGEVENMDVAEEVKPEKQSEPAVSSSTMPLVLPEKVQRTKALVECEGESIDLSGD 361
Query: 95 MGAVGRILVPGTAEGNHVMFLDLK 118
MGAVGR+++ T MFLDLK
Sbjct: 362 MGAVGRVIISETPSKESEMFLDLK 385
>gi|449532507|ref|XP_004173222.1| PREDICTED: DNA-binding protein BIN4-like, partial [Cucumis sativus]
Length = 198
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 23/133 (17%)
Query: 9 QAPKSSILALSSDSESCKDSSLLREEKEF----------QFQGKEMDEDAALTGRDEKTS 58
+ K S+ LS DSESC D++ ++E+ + + QG+ DE+A G
Sbjct: 66 ENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATSEIQGRRKDENAGSEGHVRNGD 125
Query: 59 VK-------------KVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPG 105
V+ VS+ LPLV+S+K KA VECEG SIDLSGDMGAVGR++V
Sbjct: 126 VEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSD 185
Query: 106 TAEGNHVMFLDLK 118
++ + + LDLK
Sbjct: 186 SSSAKNELCLDLK 198
>gi|224132538|ref|XP_002321341.1| predicted protein [Populus trichocarpa]
gi|222868337|gb|EEF05468.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 48/60 (80%)
Query: 62 VSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTI 121
VS LPLV+SEK+Q +KA VECEGESIDLSG+MGAVGR ++P T G+ M LDLKGT+
Sbjct: 39 VSISRLPLVLSEKVQRSKALVECEGESIDLSGEMGAVGRPVIPDTPSGDSEMHLDLKGTL 98
>gi|45736024|dbj|BAD13051.1| unknown protein [Oryza sativa Japonica Group]
gi|45736066|dbj|BAD13092.1| unknown protein [Oryza sativa Japonica Group]
Length = 193
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 93 GDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKV 144
GD+GAVGRI++ + GN + LDLKGTIYK+T+VPSRTFC+VS G EAK+
Sbjct: 39 GDVGAVGRIIISNSPNGNQELLLDLKGTIYKSTIVPSRTFCVVSVGQTEAKI 90
>gi|10177863|dbj|BAB11215.1| unnamed protein product [Arabidopsis thaliana]
Length = 531
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Query: 54 DEKTSVKKVSTLTLPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVM 113
D+K S+ LPLV+SEK+ TK VECEG+SIDLSGDMGAVGR++V T G+ M
Sbjct: 322 DQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSDTT-GD--M 378
Query: 114 FLDLK 118
+LDLK
Sbjct: 379 YLDLK 383
>gi|384247484|gb|EIE20971.1| hypothetical protein COCSUDRAFT_83530 [Coccomyxa subellipsoidea
C-169]
Length = 378
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 10/98 (10%)
Query: 56 KTSVKKVSTLT-----LPLVISEKLQLTKAFVECEG---ESIDLSGDMGAVGRILVPGTA 107
K+ V K++ L +P+++ EKL +TK VE EG S+DL+GD G VGR LV G
Sbjct: 180 KSPVSKIAVLAPVAGEIPVMMPEKLPVTKFIVELEGGNDSSVDLTGDAGVVGRWLVEGD- 238
Query: 108 EGNHVMFLDLKGTIYKTTLVP-SRTFCIVSFGHPEAKV 144
+ N + +DLKG +Y T VP + T C+V+ EA+V
Sbjct: 239 DSNPELRMDLKGVVYAATTVPCATTLCVVNLSATEARV 276
>gi|307107138|gb|EFN55382.1| hypothetical protein CHLNCDRAFT_52595 [Chlorella variabilis]
Length = 402
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 58 SVKKVSTLTLPLVISEKLQLTKAFVECEGES------IDLSGDMGAVGRILVPGTAEGNH 111
+ T +P+V+ EKL K VE E DLSGD GA+GR+++ GT E
Sbjct: 172 GLPHAPTSQMPVVLPEKLPQMKMLVELESNPDDAHHVTDLSGDSGAIGRLVIAGTKEAPE 231
Query: 112 VMFLDLKGTIYKTTLVPSR-TFCIVSFGHPEAKVCC 146
M +DLKG +Y T+VP + +++ G EAKV C
Sbjct: 232 -MQIDLKGVLYNATIVPCPVSIAVINMGQTEAKVEC 266
>gi|147811095|emb|CAN76881.1| hypothetical protein VITISV_037245 [Vitis vinifera]
Length = 693
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 76/197 (38%), Gaps = 81/197 (41%)
Query: 9 QAPKSSILALSSDSESCKDSSLLREE----------KEFQFQGKEMD------------- 45
AP S+ LSSDSESC D+S +RE+ K QF KE D
Sbjct: 130 NAPNHSVWXLSSDSESCPDNSSMREDYIHHEESSVHKTTQFPDKEKDAVLSENGQESLLN 189
Query: 46 --------------------------EDAALTGRDEKTSV-----------KKVSTLTLP 68
D G D+ T + +VS+ LP
Sbjct: 190 EASKEKSPKKRVKVEDHISSKKKKANSDMKGKGHDDGTELLEEEASDKHTEPQVSSSGLP 249
Query: 69 LVISEKLQLTKAF---------------VECEGESIDLSGDMGAVGRILVPGTAEG---- 109
LV+SEK+ +K F + +GESIDLSGDMGAVGRI+ G +E
Sbjct: 250 LVLSEKVHRSKGFRFSIEKAASLEIRPLLSVKGESIDLSGDMGAVGRIVSFGQSEAKVEA 309
Query: 110 --NHVMFLDLKGTIYKT 124
N + L + +Y+
Sbjct: 310 VMNDFIQLKPQSNVYEA 326
>gi|303275097|ref|XP_003056848.1| hypothetical protein MICPUCDRAFT_62312 [Micromonas pusilla
CCMP1545]
gi|226461200|gb|EEH58493.1| hypothetical protein MICPUCDRAFT_62312 [Micromonas pusilla
CCMP1545]
Length = 392
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 67 LPLVISEKLQLTKAFVECEG--ESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKT 124
+PL++ + K F ECEG ES+DL GD+G VGR+L +A+ + +DLKG IY
Sbjct: 195 IPLLMPATVNRNKIFFECEGAGESVDLEGDVGVVGRLLSDPSAKYTSGVKVDLKGVIYDA 254
Query: 125 TLVPSR-TFCIVSFGHPEAKVCC 146
++P+ + +++ EAKV C
Sbjct: 255 KILPTPASIVVLAVNQTEAKVEC 277
>gi|320166916|gb|EFW43815.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 236
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 67 LPLVISEKLQLTKAFVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTL 126
+PLV+ + T +E ++LSGD G+VGR++V + + LDLKG I++ T+
Sbjct: 53 IPLVLGKPA--TAFLMETTEPQLNLSGDTGSVGRLVV-NAQDAAAPLVLDLKGLIFQGTV 109
Query: 127 VPSRTFCIVSFGHPEAKV 144
VPS TF +V+ G EA++
Sbjct: 110 VPSNTFMLVTIGPNEARI 127
>gi|299471419|emb|CBN79372.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 240
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 81 FVECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHP 140
V E+++ +GD GA+GRI V G +G + F DLKG + ++PS T +V G
Sbjct: 76 LVHLRDEALNFAGDTGAIGRISVGGKKKGRGLTF-DLKGQQFSGQIIPSATVMVVGIGKT 134
Query: 141 EAKV 144
EAKV
Sbjct: 135 EAKV 138
>gi|255084389|ref|XP_002508769.1| predicted protein [Micromonas sp. RCC299]
gi|226524046|gb|ACO70027.1| predicted protein [Micromonas sp. RCC299]
Length = 376
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 67 LPLVISEKLQLTKAFVECEG--ESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKT 124
+PL + + K F E EG E++DL GD+G VGR+L + + + +D+KG IY
Sbjct: 178 VPLFMPSAVNRNKVFFELEGTGEAVDLEGDVGVVGRLLSNASEKHGSGLQMDMKGVIYNA 237
Query: 125 TLVPS-RTFCIVSFGHPEAKV 144
++P+ + I++ EAKV
Sbjct: 238 RILPTPASVVILAVNANEAKV 258
>gi|428174918|gb|EKX43811.1| hypothetical protein GUITHDRAFT_140250 [Guillardia theta CCMP2712]
Length = 309
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 39 FQGKEMDEDAALTGRDEKTSVKKVST------LTLPLVISEKLQLTKAF--VECEGESID 90
Q K + E+A D KT K+ T ++P+++ ++ K V+CE +++D
Sbjct: 114 LQNKIVAEEADEKTSDVKTGTAKIETSKIRFSKSVPVLVPNIKRVCKNMFVVQCEDQNLD 173
Query: 91 LSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKV 144
GD G +G I G M LDLKG +Y+ +++P T ++ G E K+
Sbjct: 174 FEGDSGVIGTIKT-----GERSMELDLKGQLYEGSILPCCTMMVMDMGATEVKI 222
>gi|308804497|ref|XP_003079561.1| unnamed protein product [Ostreococcus tauri]
gi|116058016|emb|CAL54219.1| unnamed protein product [Ostreococcus tauri]
Length = 229
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 82 VECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVP 128
+E GE++DL GD GAVGR L AE + +D+KG +Y +VP
Sbjct: 85 IEGNGEAVDLDGDTGAVGRWL----AESARSLKVDMKGLMYNARVVP 127
>gi|412989095|emb|CCO15686.1| hypothetical protein VOLCADRAFT_101408 [Bathycoccus prasinos]
Length = 422
Score = 42.7 bits (99), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 24/101 (23%)
Query: 67 LPLVIS----EKLQLTKAFVECEG--ESIDLSGDMGAVGRILV-----PGTAEGNHV--- 112
+PL+I+ +K + EC+G E++DLSGD+G VGR+LV P G+
Sbjct: 242 MPLLINHGALQKTANSTILFECKGSGEAVDLSGDVGVVGRLLVERESQPTGGGGSKASTS 301
Query: 113 -------MFLDLKGTIY--KTTLVPSRTFCIVSFGHPEAKV 144
+ +DLKG +Y +T L+ S T IV+ G +AK+
Sbjct: 302 KQQPHASVKVDLKGVMYLARTHLL-SSTVAIVNVGAEDAKI 341
>gi|145347277|ref|XP_001418100.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578328|gb|ABO96393.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 999
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 82 VECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPS 129
+E GE++DL GD GAVGR L AE + + +D+KG +Y +V S
Sbjct: 55 IEGAGEAVDLDGDTGAVGRWL----AESSRALKVDMKGVMYNARVVSS 98
>gi|255544302|ref|XP_002513213.1| conserved hypothetical protein [Ricinus communis]
gi|223547711|gb|EEF49204.1| conserved hypothetical protein [Ricinus communis]
Length = 137
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 5 FIVEQAPKSSILALSSDSESCKDSSLLREEKEFQFQGKEMDEDAALTGRDEKTSVKKVST 64
+V+QA K SI ALSSDSESC D S R+ K Q + ++DA L + ++K S
Sbjct: 12 LVVKQAAKRSIWALSSDSESCPDDSSQRKTKSNQPKESRKEKDAILVDNSVEKALKGKSP 71
Query: 65 LTLPLVISEKLQLTKAFVECEGESIDLSGDMGAV 98
L V KL+ E + + + +GD V
Sbjct: 72 KKLLKVEGRKLKKK----ENKNDDVPKTGDNDDV 101
>gi|387199325|gb|AFJ68895.1| hypothetical protein NGATSA_2017510 [Nannochloropsis gaditana
CCMP526]
Length = 226
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 87 ESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKV 144
++ DL+GD GAVGR+ V + + + LDLKG Y L T +VS G EAKV
Sbjct: 25 KAQDLTGDSGAVGRVHV----KKDRGVVLDLKGHQYLAELCRCPTMLLVSLGEEEAKV 78
>gi|422294628|gb|EKU21928.1| hypothetical protein NGA_2017520, partial [Nannochloropsis gaditana
CCMP526]
Length = 238
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 87 ESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVPSRTFCIVSFGHPEAKV 144
++ DL+GD GAVGR+ V + + + LDLKG Y L T +VS G EAKV
Sbjct: 37 KAQDLTGDSGAVGRVHV----KKDRGVVLDLKGHQYLAELCRCPTMLLVSLGEEEAKV 90
>gi|302857504|ref|XP_002959890.1| hypothetical protein VOLCADRAFT_101408 [Volvox carteri f.
nagariensis]
gi|300254022|gb|EFJ39045.1| hypothetical protein VOLCADRAFT_101408 [Volvox carteri f.
nagariensis]
Length = 340
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 35/118 (29%)
Query: 62 VSTLTLPLVISEKLQLTKAFVE-----CEGE----SIDLSGDMGAVGRILVPGTAEGNH- 111
V LP+++ EKL K +E GE + DLSGD GAVGR++V N
Sbjct: 38 VEAGKLPIMLPEKLNRNKVLLELPPAAMSGEHYHGAADLSGDSGAVGRLVVGKAPAANSK 97
Query: 112 ------------------------VMFLDLKGTIYKTTLVP-SRTFCIVSFGHPEAKV 144
+ +DLKG +Y ++P + T +++ G EAKV
Sbjct: 98 GTAAAAAAAAAGGSEGGGSGGDSVQLQVDLKGLLYNAWVLPLAGTAMVLNIGPSEAKV 155
>gi|307109224|gb|EFN57462.1| hypothetical protein CHLNCDRAFT_142962 [Chlorella variabilis]
Length = 642
Score = 37.0 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 83 ECEGESIDLSGDMGAVGRILVPGTAEGNHVMFLDLKGTIYKTTLVP 128
E G ++L GD G +GR+ V + + LDL G +Y+ LVP
Sbjct: 443 EVPGHLLNLEGDSGTIGRVAVERGSGKEAALQLDLMGIVYQAELVP 488
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,639,213,718
Number of Sequences: 23463169
Number of extensions: 99551547
Number of successful extensions: 245714
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 245637
Number of HSP's gapped (non-prelim): 66
length of query: 195
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 60
effective length of database: 9,191,667,552
effective search space: 551500053120
effective search space used: 551500053120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)