BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029333
(195 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449448008|ref|XP_004141758.1| PREDICTED: uncharacterized protein LOC101218377 [Cucumis sativus]
gi|449491773|ref|XP_004158999.1| PREDICTED: uncharacterized protein LOC101228255 [Cucumis sativus]
Length = 197
Score = 265 bits (677), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 124/192 (64%), Positives = 155/192 (80%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAE 60
M +L L SY L S S +FN TNS +LK ++ ++F R+++RA T+ ++ S+A E
Sbjct: 1 MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
EPP+V+ AFV+SVLLPDGTPD+H R ACGGQKLR+IML+SNIDLYGPY+R L NCAGGGT
Sbjct: 61 EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
CGTCMVE++EGKELL RTD EK+KLKRKPKNWRLACQTTVG PDS G++V+QQLPEWK
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
Query: 181 HEWKYKKIPTSE 192
HEW Y+++ S+
Sbjct: 181 HEWGYEEVELSD 192
>gi|225442545|ref|XP_002284206.1| PREDICTED: uncharacterized protein LOC100241139 [Vitis vinifera]
gi|297743235|emb|CBI36102.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/194 (72%), Positives = 160/194 (82%), Gaps = 6/194 (3%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAE 60
MG+LQLNSY L+S+SL NF T+ +HK+LK + S SR +I+A TI E+ SQA ++
Sbjct: 1 MGTLQLNSYGLSSFSLTQNF--TSKTHKTLKPFNPPSSSRPKIKAIGTIPESQSQATPSD 58
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
EPP VNFAFV+SVLLPDGTPD+HFR+ACGGQKLRDIML+SNIDLYGPYARPL NC GGGT
Sbjct: 59 EPPSVNFAFVNSVLLPDGTPDVHFRSACGGQKLRDIMLDSNIDLYGPYARPLLNCGGGGT 118
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
CGTC+VEVIEGK+LL RTDKEKEKLKR PK WRLACQTTVG DS GLVVIQQLPEWK
Sbjct: 119 CGTCIVEVIEGKDLLTPRTDKEKEKLKRNPKTWRLACQTTVGKADSRGLVVIQQLPEWKA 178
Query: 181 HEWKYKKIPTSELP 194
HEW Y+K ELP
Sbjct: 179 HEWTYEK----ELP 188
>gi|255549894|ref|XP_002515998.1| electron carrier, putative [Ricinus communis]
gi|223544903|gb|EEF46418.1| electron carrier, putative [Ricinus communis]
Length = 204
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/201 (68%), Positives = 162/201 (80%), Gaps = 8/201 (3%)
Query: 3 SLQLNSYRLA-----SYSLPYNFNCTTNS-HKSLKFYKRVSFSRSRIRATATI--SENDS 54
+LQLNSY LA S++L ++ +TN+ HKSLK + VSFSR +IRA T+ S++D+
Sbjct: 4 ALQLNSYGLANSLKASHNLKHSAATSTNNIHKSLKHSRSVSFSRVKIRAVGTVPDSKSDA 63
Query: 55 QANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN 114
+ EEPP V F FVHSVLLPDGTPD+HFRT CGGQKLRD ML+SNIDLYGPY RPL N
Sbjct: 64 KQEPPEEPPSVKFVFVHSVLLPDGTPDVHFRTTCGGQKLRDTMLDSNIDLYGPYGRPLLN 123
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQ 174
CAGGGTCG+CMVEV+ GKELL RT+KEK+ LK+KPKNWRLACQTTVG+PDSTGLVVIQQ
Sbjct: 124 CAGGGTCGSCMVEVVMGKELLSPRTEKEKKILKKKPKNWRLACQTTVGSPDSTGLVVIQQ 183
Query: 175 LPEWKGHEWKYKKIPTSELPQ 195
LPEWK HEWKY+KI E+ Q
Sbjct: 184 LPEWKAHEWKYEKILPPEISQ 204
>gi|388508898|gb|AFK42515.1| unknown [Lotus japonicus]
Length = 195
Score = 262 bits (670), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/184 (68%), Positives = 148/184 (80%), Gaps = 3/184 (1%)
Query: 4 LQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEEPP 63
LQL S+ L S LP +F+ + +++ KR++F+ + IRA T+ E D + A +EPP
Sbjct: 6 LQLTSHALCS--LP-SFSNSFRPNRTFHCSKRLNFATTNIRAVGTVPERDLETTATDEPP 62
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGT 123
V FAFV SVLLPDGTPDIH+R+A GGQKLRDIML+SNI+LYGPY + SNCAGGGTC T
Sbjct: 63 SVGFAFVSSVLLPDGTPDIHYRSATGGQKLRDIMLDSNIELYGPYGKLFSNCAGGGTCAT 122
Query: 124 CMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEW 183
CMVEV+EG ELL RTDKEKEKLKRKPKNWRLACQTTVG PDSTG+VVIQQLPEWKGHEW
Sbjct: 123 CMVEVLEGTELLNPRTDKEKEKLKRKPKNWRLACQTTVGEPDSTGVVVIQQLPEWKGHEW 182
Query: 184 KYKK 187
KY+K
Sbjct: 183 KYEK 186
>gi|224059120|ref|XP_002299725.1| predicted protein [Populus trichocarpa]
gi|118486517|gb|ABK95098.1| unknown [Populus trichocarpa]
gi|222846983|gb|EEE84530.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/196 (68%), Positives = 154/196 (78%), Gaps = 11/196 (5%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKR-VSFSRSR--IRATATISENDSQAN 57
MGSLQLNSY LA + +P N KSLK + +SFS SR IRA +T+ E+ S+A
Sbjct: 1 MGSLQLNSYGLAPFQVPTN--------KSLKPSRHTISFSPSRLKIRAVSTVPESSSEAK 52
Query: 58 AAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAG 117
EEPP V+ AFVHSVLLPDGTPD+HFR A GGQKLRDIM+++NI+LYGPY+R L NC G
Sbjct: 53 EPEEPPCVHLAFVHSVLLPDGTPDVHFRNAPGGQKLRDIMMDTNIELYGPYSRALLNCGG 112
Query: 118 GGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPE 177
GGTC TCMVEVIEGKELL RTD EKEKLK+KPKNWRLACQTTVG PDS GLVVIQQLPE
Sbjct: 113 GGTCATCMVEVIEGKELLSPRTDNEKEKLKKKPKNWRLACQTTVGNPDSRGLVVIQQLPE 172
Query: 178 WKGHEWKYKKIPTSEL 193
WK HEW Y+K+ SE+
Sbjct: 173 WKAHEWNYEKLLFSEM 188
>gi|297834498|ref|XP_002885131.1| hypothetical protein ARALYDRAFT_897928 [Arabidopsis lyrata subsp.
lyrata]
gi|297330971|gb|EFH61390.1| hypothetical protein ARALYDRAFT_897928 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 127/202 (62%), Positives = 148/202 (73%), Gaps = 14/202 (6%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSR--------IRATATI-SE 51
MGS+QLN L + SLP N + SHK+ + F RS+ +RA +T +
Sbjct: 1 MGSVQLNGSGLVA-SLPPNHSF---SHKTKLSNPKSYFLRSKHNAAGTKTVRAISTAPAS 56
Query: 52 NDSQANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARP 111
A+ +EPP V+FAFVHSVLLPDGTPD+H+R ACGGQKLRDIML+SNI+LYGPY++P
Sbjct: 57 QPPAADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRACGGQKLRDIMLDSNIELYGPYSKP 116
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVV 171
LSNCAG GTC TCMVE++ GKELL RTD EKEKLKRKPKNWRLACQT VG PDSTGLVV
Sbjct: 117 LSNCAGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLVV 176
Query: 172 IQQLPEWKGHEWKY-KKIPTSE 192
IQQLPEWK HEW K IP +
Sbjct: 177 IQQLPEWKAHEWNIPKNIPNDD 198
>gi|15228165|ref|NP_188246.1| NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]
gi|9279708|dbj|BAB01265.1| unnamed protein product [Arabidopsis thaliana]
gi|14596159|gb|AAK68807.1| Unknown protein [Arabidopsis thaliana]
gi|30023670|gb|AAP13368.1| At3g16240 [Arabidopsis thaliana]
gi|332642269|gb|AEE75790.1| NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]
Length = 204
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 146/199 (73%), Gaps = 8/199 (4%)
Query: 1 MGSLQLNSYRLASYSLPYN--FNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQ--- 55
MGS+QL+ L + SLP N F+ T +K ++ R + +R + IS +
Sbjct: 1 MGSVQLSGSGLVA-SLPPNHSFSHKTKLNKPNSYFFRSKHNAARTKTVRAISTAPASQPP 59
Query: 56 -ANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN 114
A+ +EPP V+FAFVHSVLLPDGTPD+H+R A GGQKLRDIML+SNI+LYGPY++PLSN
Sbjct: 60 AADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSNIELYGPYSKPLSN 119
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQ 174
CAG GTC TCMVE++ GKELL RTD EKEKLKRKPKNWRLACQT VG PDSTGLVVIQQ
Sbjct: 120 CAGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLVVIQQ 179
Query: 175 LPEWKGHEWKY-KKIPTSE 192
LPEWK HEW K IP +
Sbjct: 180 LPEWKAHEWNIPKNIPNDD 198
>gi|357454845|ref|XP_003597703.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
gi|355486751|gb|AES67954.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
Length = 191
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/168 (70%), Positives = 138/168 (82%), Gaps = 5/168 (2%)
Query: 23 TTNSHKSLKFYKRVS-FSRSRIRATATISEN-DSQANA-AEEPPVVNFAFVHSVLLPDGT 79
+++SHK KF + F+R++IRA T+ E DS+ + +PP + FAFV SVLLPDGT
Sbjct: 17 SSSSHK--KFRPNTTLFARTKIRAVGTVPEKKDSETTTDSNDPPSIGFAFVSSVLLPDGT 74
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
PD+H+RTACGGQKLR+IML+SNI+LYGPY R L NC GGGTC TCMVEV+EGKELL T
Sbjct: 75 PDVHYRTACGGQKLRNIMLDSNIELYGPYGRILLNCGGGGTCATCMVEVLEGKELLSPCT 134
Query: 140 DKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYKK 187
DKEKEKLKRKPKNWRLACQTTVG DSTG+VVIQQLPEWKGHEWKY+K
Sbjct: 135 DKEKEKLKRKPKNWRLACQTTVGEADSTGVVVIQQLPEWKGHEWKYEK 182
>gi|356556426|ref|XP_003546527.1| PREDICTED: uncharacterized protein LOC100820264 [Glycine max]
Length = 194
Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 127/187 (67%), Positives = 145/187 (77%), Gaps = 10/187 (5%)
Query: 4 LQLNSYRLASY-SLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAE-- 60
LQL+S+ L S S +NF T +S KRVS+ R+RIRA T+ E DS ++ +
Sbjct: 6 LQLSSHALRSITSSSHNFRPTYSS-------KRVSYVRTRIRAVGTVPEKDSDSDTTDPD 58
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
EPP V FV SVLLPDGTPD+HFR+ACGGQ+LR IML+SN++LYGPYARPL NC GGGT
Sbjct: 59 EPPYVGLVFVSSVLLPDGTPDMHFRSACGGQRLRKIMLDSNVELYGPYARPLLNCGGGGT 118
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
CGTCMVEV+EGKELL RTDKEKE LK+KPKNWRLACQT VG PDS G VVIQQLPEWKG
Sbjct: 119 CGTCMVEVLEGKELLNPRTDKEKEILKKKPKNWRLACQTIVGKPDSRGAVVIQQLPEWKG 178
Query: 181 HEWKYKK 187
HEWKY K
Sbjct: 179 HEWKYAK 185
>gi|357122795|ref|XP_003563100.1| PREDICTED: uncharacterized protein LOC100845974 [Brachypodium
distachyon]
Length = 187
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 122/182 (67%)
Query: 2 GSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEE 61
+LQ S AS S P + +S+ ++ R R+ E A EE
Sbjct: 3 ATLQFLSLLAASSSHPAPSCRSEKKSRSVHLPQQQRNRRLRVIRAVETDEPSVAAPPEEE 62
Query: 62 PPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTC 121
PP V+FAFV LLPDGTPD+H+RTACGGQKLRDIML +IDLYGPY + L NC+GGG C
Sbjct: 63 PPSVDFAFVSPRLLPDGTPDVHYRTACGGQKLRDIMLQGHIDLYGPYDKFLLNCSGGGEC 122
Query: 122 GTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGH 181
GTC+VEV+EG E+L + + EKEKL+RKPK WRLACQ TVG PDS G +VIQQLPEWK H
Sbjct: 123 GTCIVEVVEGGEMLSPKNEVEKEKLRRKPKTWRLACQATVGKPDSRGQMVIQQLPEWKVH 182
Query: 182 EW 183
EW
Sbjct: 183 EW 184
>gi|351726798|ref|NP_001235859.1| uncharacterized protein LOC100500287 [Glycine max]
gi|255629942|gb|ACU15323.1| unknown [Glycine max]
Length = 194
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/188 (67%), Positives = 144/188 (76%), Gaps = 12/188 (6%)
Query: 4 LQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATI-SENDSQANAA--- 59
LQL S+ L S S +NF + L KRVS+ R++IRA T+ E DS ++
Sbjct: 6 LQLTSHALRSVS-SHNF-------RPLYSSKRVSYVRTKIRAVGTVPDEKDSDSDITTDP 57
Query: 60 EEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGG 119
+EPP V FV SVLLPDGTPD+HFR+ACGGQ+LR IML+SN+DLYGPYARPL NC GGG
Sbjct: 58 DEPPYVGLVFVSSVLLPDGTPDMHFRSACGGQRLRKIMLDSNVDLYGPYARPLLNCGGGG 117
Query: 120 TCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
TCGTCMVEV+EGKELL RTDKEK+ LK+KPKNWRLACQTTVG PDS G VVIQQLPEWK
Sbjct: 118 TCGTCMVEVLEGKELLNPRTDKEKKILKKKPKNWRLACQTTVGKPDSRGAVVIQQLPEWK 177
Query: 180 GHEWKYKK 187
GHEWKY K
Sbjct: 178 GHEWKYAK 185
>gi|115472141|ref|NP_001059669.1| Os07g0489800 [Oryza sativa Japonica Group]
gi|33146986|dbj|BAC80058.1| 2Fe-2S iron-sulfur cluster protein-like [Oryza sativa Japonica
Group]
gi|113611205|dbj|BAF21583.1| Os07g0489800 [Oryza sativa Japonica Group]
gi|125600273|gb|EAZ39849.1| hypothetical protein OsJ_24289 [Oryza sativa Japonica Group]
gi|215686926|dbj|BAG90796.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Query: 42 RIRATAT-ISENDSQANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNS 100
R+RA T + A EEPP V+FAFV LLPDGTPD+H+RTACGGQKLRDIML++
Sbjct: 66 RVRAVETDAAAGGEAKAAPEEPPSVDFAFVAPRLLPDGTPDVHYRTACGGQKLRDIMLDN 125
Query: 101 NIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTT 160
IDLYGPY + L NC GGG CGTC+VEV+EG ELL +TD EKE LKRKPK WRLACQ T
Sbjct: 126 YIDLYGPYDKLLLNCEGGGECGTCIVEVVEGGELLSPKTDVEKELLKRKPKTWRLACQAT 185
Query: 161 VGTPDSTGLVVIQQLPEWKGHEW 183
VG PDSTG +VIQQLPEWK HEW
Sbjct: 186 VGNPDSTGQMVIQQLPEWKIHEW 208
>gi|147838870|emb|CAN70335.1| hypothetical protein VITISV_011434 [Vitis vinifera]
Length = 159
Score = 205 bits (521), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/194 (57%), Positives = 130/194 (67%), Gaps = 38/194 (19%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAE 60
MG+LQLNSY L+S+SL NF T+ +HK+LK + S SR +I+A TI E+ SQA ++
Sbjct: 1 MGTLQLNSYGLSSFSLTQNF--TSKTHKTLKPFNPPSSSRPKIKAIGTIPESQSQATPSD 58
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
EPP VNFAFV+SVLLPDGTPD+HFR+ACGGQKLRDIML+SNIDLYGPY R L +
Sbjct: 59 EPPSVNFAFVNSVLLPDGTPDVHFRSACGGQKLRDIMLDSNIDLYGPYVRILDSYT---- 114
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
VIEGKELL RTDKEKEKLKR VVIQQLPEWK
Sbjct: 115 -------VIEGKELLTPRTDKEKEKLKR---------------------VVIQQLPEWKA 146
Query: 181 HEWKYKKIPTSELP 194
HEW Y+K ELP
Sbjct: 147 HEWTYEK----ELP 156
>gi|242045682|ref|XP_002460712.1| hypothetical protein SORBIDRAFT_02g033590 [Sorghum bicolor]
gi|241924089|gb|EER97233.1| hypothetical protein SORBIDRAFT_02g033590 [Sorghum bicolor]
Length = 195
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 104/123 (84%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
EPP ++FAFV LLPDGTPD+H+RTACGGQKLRDIML++ IDLYGPY + L NCAGGG
Sbjct: 71 EPPSIDFAFVSPRLLPDGTPDVHYRTACGGQKLRDIMLDAYIDLYGPYDKVLLNCAGGGV 130
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
CGTC+VEV+EGKE+L +TD EKE LKRKPK WRLACQ TVG DSTG ++IQQLPEWK
Sbjct: 131 CGTCLVEVVEGKEMLSPKTDVEKELLKRKPKTWRLACQATVGNADSTGQMIIQQLPEWKI 190
Query: 181 HEW 183
HEW
Sbjct: 191 HEW 193
>gi|326523759|dbj|BAJ93050.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 196
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 90/123 (73%), Positives = 105/123 (85%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
EPP V+FAFV LLPDGTPD+H+RTACGGQKLRDIML++ IDLYGPY + L NC+GGG
Sbjct: 72 EPPSVDFAFVSPRLLPDGTPDVHYRTACGGQKLRDIMLDAYIDLYGPYDKLLLNCSGGGE 131
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
CGTC+VEV+EG E+L + + EKEKLKRKPK+WRLACQ TVG PDSTG +VIQQLPEWK
Sbjct: 132 CGTCIVEVVEGGEMLSPKNEVEKEKLKRKPKSWRLACQATVGNPDSTGQMVIQQLPEWKV 191
Query: 181 HEW 183
H+W
Sbjct: 192 HKW 194
>gi|125558371|gb|EAZ03907.1| hypothetical protein OsI_26041 [Oryza sativa Indica Group]
Length = 210
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/119 (75%), Positives = 100/119 (84%)
Query: 65 VNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTC 124
V+FAFV LLPDGTPD+H+RTACGGQKLRDIML++ IDLYGPY + L NC GGG CGTC
Sbjct: 90 VDFAFVAPRLLPDGTPDVHYRTACGGQKLRDIMLDNYIDLYGPYDKLLLNCEGGGECGTC 149
Query: 125 MVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEW 183
+VEV+EG ELL +TD EKE LKRKPK WRLACQ TVG PDSTG +VIQQLPEWK HEW
Sbjct: 150 IVEVVEGGELLSPKTDVEKELLKRKPKTWRLACQATVGNPDSTGQMVIQQLPEWKIHEW 208
>gi|226530383|ref|NP_001141368.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|194704210|gb|ACF86189.1| unknown [Zea mays]
gi|195611892|gb|ACG27776.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195637836|gb|ACG38386.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|414886715|tpg|DAA62729.1| TPA: electron carrier/ electron transporter/ iron ion binding
protein [Zea mays]
Length = 191
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 99/119 (83%)
Query: 65 VNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTC 124
V+FAFV LLPDGTPD+H+RTA GGQKLRDIML+ IDLYGPY + L NC+GGG CGTC
Sbjct: 71 VDFAFVSPRLLPDGTPDVHYRTARGGQKLRDIMLDGYIDLYGPYDKVLLNCSGGGVCGTC 130
Query: 125 MVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEW 183
+VEV+EGKE+L +TD EKE LKRKPK WRLACQ TVG DSTG ++IQQLPEWK HEW
Sbjct: 131 IVEVVEGKEMLSPKTDVEKELLKRKPKTWRLACQATVGNADSTGQMIIQQLPEWKIHEW 189
>gi|226532728|ref|NP_001147712.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195613236|gb|ACG28448.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 193
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 100/123 (81%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
E ++FAFV LLPDGTPD+H+RTA GGQKLRD+ML+ IDLYGPY + L NC+GGG
Sbjct: 69 EESTIDFAFVSPRLLPDGTPDVHYRTARGGQKLRDVMLDGYIDLYGPYDKVLLNCSGGGV 128
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
CGTC+VEV+EGKE+L +T+ EKE LKRKPK WRLACQ TVG DSTG ++IQQLPEWK
Sbjct: 129 CGTCVVEVVEGKEMLSPKTEVEKELLKRKPKTWRLACQATVGNADSTGQMIIQQLPEWKI 188
Query: 181 HEW 183
HEW
Sbjct: 189 HEW 191
>gi|356563826|ref|XP_003550159.1| PREDICTED: uncharacterized protein LOC100807125 [Glycine max]
Length = 161
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 87/127 (68%), Gaps = 2/127 (1%)
Query: 54 SQANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPL 112
+ A++ E PP + F+ DG+ + A G+KL R+IML++ I+LY Y + L
Sbjct: 35 AAASSPESPPEIELEFIGPKPGSDGSYPVERVKAISGEKLLRNIMLDNKIELYATYGK-L 93
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVI 172
NCAGGG+CGTC+VE+IEGK+LL RT+ E L +KP++WRLACQT VG +++G V +
Sbjct: 94 MNCAGGGSCGTCIVEIIEGKDLLNERTNTELRYLSKKPESWRLACQTIVGNKENSGKVAV 153
Query: 173 QQLPEWK 179
Q++P+WK
Sbjct: 154 QRIPQWK 160
>gi|225430081|ref|XP_002281853.1| PREDICTED: uncharacterized protein LOC100250753 [Vitis vinifera]
Length = 172
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPLSNCAGGG 119
E P + F+ DG+ + A G+KL R+IML++ I+LY PY + L NC GGG
Sbjct: 53 EKPEIELEFIGEKPGSDGSFPVERAKAVSGEKLLRNIMLDNKIELYAPYGK-LMNCGGGG 111
Query: 120 TCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+CGTC+VE+I+GK+LL RT+ E LK+KP++WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 112 SCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRLPQWK 171
>gi|296081922|emb|CBI20927.3| unnamed protein product [Vitis vinifera]
Length = 137
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPLSNCAGGG 119
E P + F+ DG+ + A G+KL R+IML++ I+LY PY + L NC GGG
Sbjct: 18 EKPEIELEFIGEKPGSDGSFPVERAKAVSGEKLLRNIMLDNKIELYAPYGK-LMNCGGGG 76
Query: 120 TCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+CGTC+VE+I+GK+LL RT+ E LK+KP++WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 77 SCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRLPQWK 136
>gi|449441962|ref|XP_004138751.1| PREDICTED: uncharacterized protein LOC101202753 isoform 1 [Cucumis
sativus]
Length = 176
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 90/135 (66%), Gaps = 4/135 (2%)
Query: 48 TISENDSQA--NAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDL 104
+++ N S+ + E P + F+ DG+ + A G K LR+IML++ ++L
Sbjct: 42 SVAANSSEPLLSTPAEKPEIELEFIGPKPGSDGSFPVDTVKAISGDKLLRNIMLDNKLEL 101
Query: 105 YGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTP 164
Y PY + L NC GGG+CGTC+VE+++GK+LL RT+ E LK+KP++WRLACQT VG
Sbjct: 102 YAPYGK-LMNCGGGGSCGTCIVEILDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNK 160
Query: 165 DSTGLVVIQQLPEWK 179
+++G VV+Q+LP+WK
Sbjct: 161 ENSGKVVVQRLPQWK 175
>gi|115465347|ref|NP_001056273.1| Os05g0555300 [Oryza sativa Japonica Group]
gi|113579824|dbj|BAF18187.1| Os05g0555300 [Oryza sativa Japonica Group]
gi|215693060|dbj|BAG88480.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632504|gb|EEE64636.1| hypothetical protein OsJ_19490 [Oryza sativa Japonica Group]
Length = 185
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 106/186 (56%), Gaps = 9/186 (4%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRAT------ATISENDS 54
M + S L S ++P + +T H+ F +RIR + A+ +
Sbjct: 1 MAATSSTSTALFSLAIPSSRVVSTRGHRKAS-SGSGPFRAARIRCSNAASPNASAGAASA 59
Query: 55 QANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLS 113
+ A P ++ FV DG+ + A G+K LRD+M+ + I+LY Y + +
Sbjct: 60 EEAAPPPKPQIDLEFVGPKADADGSFPVDRAAAGSGEKLLRDVMVENKIELYAAYGKVM- 118
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQ 173
NC GGG+CGTC+VE+++GKELL RT+ E LK+KP++WRLACQT VG +++G VV+Q
Sbjct: 119 NCGGGGSCGTCIVEIVDGKELLNERTNTENRYLKKKPESWRLACQTIVGNKENSGKVVVQ 178
Query: 174 QLPEWK 179
+LP+WK
Sbjct: 179 RLPQWK 184
>gi|218197242|gb|EEC79669.1| hypothetical protein OsI_20921 [Oryza sativa Indica Group]
Length = 185
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 105/186 (56%), Gaps = 9/186 (4%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRAT------ATISENDS 54
M + S L S ++P + +T H+ F +RIR + A+ +
Sbjct: 1 MAATSSTSTALFSLAIPSSRVVSTRGHRKAS-SGSGPFRAARIRCSNAASPNASAGAASA 59
Query: 55 QANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLS 113
+ A P ++ FV DG+ + A G+K LRD+M+ + I+LY Y + +
Sbjct: 60 EEAAPPPKPQIDLEFVGPKADADGSFPVDRAAAGSGEKLLRDVMVENKIELYAAYGKVM- 118
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQ 173
NC GGG+CGTC+VE+++GKE L RT+ E LK+KP++WRLACQT VG +++G VV+Q
Sbjct: 119 NCGGGGSCGTCIVEIVDGKEFLNERTNTENRYLKKKPESWRLACQTIVGNKENSGKVVVQ 178
Query: 174 QLPEWK 179
+LP+WK
Sbjct: 179 RLPQWK 184
>gi|226503349|ref|NP_001147484.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195611680|gb|ACG27670.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 182
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 11 LASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEEPPV--VNFA 68
+A S P + + S S ++ SR+ ++ S N SQ A PP +
Sbjct: 11 VALASFPSAASTSAPSRVSASSHRGQRHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELE 70
Query: 69 FVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVE 127
FV DG+ + A G+K LRD+M + I+LY Y + + NC GGG+CGTC+VE
Sbjct: 71 FVGPKPGADGSFPVDRAEAASGEKLLRDVMNENKIELYAAYGKVM-NCGGGGSCGTCIVE 129
Query: 128 VIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+I+GKELL RT+ E LK+KP +WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 130 IIDGKELLNERTNTENRYLKKKPDSWRLACQTIVGNKENSGKVVVQRLPQWK 181
>gi|297802756|ref|XP_002869262.1| hypothetical protein ARALYDRAFT_913185 [Arabidopsis lyrata subsp.
lyrata]
gi|297315098|gb|EFH45521.1| hypothetical protein ARALYDRAFT_913185 [Arabidopsis lyrata subsp.
lyrata]
Length = 175
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 101/173 (58%), Gaps = 9/173 (5%)
Query: 15 SLPYNFNCTTNSHKSLKFYKRVSFSRSRI-------RATATISENDSQANAAEEPPVVNF 67
SL +N T +S + + K R R+ ++++ + Q +A PP +
Sbjct: 3 SLGFNLGFTFSSAQIQQHRKVSGGGRVRVISCNSSSSSSSSSQASSPQGISAATPPEIEL 62
Query: 68 AFVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMV 126
F DG+ + A G+K LR IM ++ I+LY Y + + NC GGG+CGTC+V
Sbjct: 63 EFFGPKPGSDGSYPVDKAKAVSGEKLLRSIMQDTKIELYAAYGKVM-NCGGGGSCGTCIV 121
Query: 127 EVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
E+++G++LL RTD E LK+KP++WRLACQT VG +++G VV+Q++P+WK
Sbjct: 122 EILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWK 174
>gi|195655453|gb|ACG47194.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 184
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Query: 16 LPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEEPPV--VNFAFVHSV 73
P + + S S ++ SR+ ++ S N SQ A PP + FV
Sbjct: 18 FPSAASTSAPSRVSASSHRGQRHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELEFVGPK 77
Query: 74 LLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGK 132
PDG+ + A G+K LRD+M + I+LY Y + + NC GGG+CGTC+VE+I+GK
Sbjct: 78 PGPDGSFPVDRAEATSGEKLLRDVMNENKIELYAAYGKVM-NCGGGGSCGTCIVEIIDGK 136
Query: 133 ELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
ELL RT+ E LK+KP +WRLACQT VG ++G VV+Q+LP+WK
Sbjct: 137 ELLNERTNXENRYLKKKPDSWRLACQTIVGNKXNSGKVVVQRLPQWK 183
>gi|413946430|gb|AFW79079.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 184
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Query: 16 LPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEEPPV--VNFAFVHSV 73
P + + S S ++ SR+ ++ S N SQ A PP + FV
Sbjct: 18 FPSAASTSAPSRVSASSHRGQRHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELEFVGPK 77
Query: 74 LLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGK 132
DG+ + A G+K LRD+M + I+LY Y + + NC GGG+CGTC+VE+I+GK
Sbjct: 78 PGADGSFPVDRAEAASGEKLLRDVMNENKIELYAAYGKVM-NCGGGGSCGTCIVEIIDGK 136
Query: 133 ELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
ELL RT+ E LK+KP +WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 137 ELLNERTNTENRYLKKKPDSWRLACQTIVGNKENSGKVVVQRLPQWK 183
>gi|414590283|tpg|DAA40854.1| TPA: hypothetical protein ZEAMMB73_132806 [Zea mays]
Length = 165
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 46/56 (82%)
Query: 128 VIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEW 183
V+EGKE+L +T+ EKE LKRKPK WRLACQ TVG DSTG ++IQQLPEWK HEW
Sbjct: 108 VVEGKEMLSPKTEVEKELLKRKPKTWRLACQATVGNADSTGQMIIQQLPEWKIHEW 163
>gi|226500972|ref|NP_001150870.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195642484|gb|ACG40710.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 184
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Query: 16 LPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEEPPV--VNFAFVHSV 73
P + + S S ++ SR+ ++ S N SQ A PP + FV
Sbjct: 18 FPSAASTSAPSRVSASSHRGQRHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELEFVGPK 77
Query: 74 LLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGK 132
DG+ + A G+K LRD+M + I+LY Y + + NC GGG+CGTC+VE+I+GK
Sbjct: 78 PGADGSFPVDRAEATSGEKLLRDVMNENKIELYAAYGKVM-NCGGGGSCGTCIVEIIDGK 136
Query: 133 ELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
ELL RT+ E LK+KP +WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 137 ELLNERTNTENRYLKKKPDSWRLACQTIVGNKENSGKVVVQRLPQWK 183
>gi|326523007|dbj|BAJ88549.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 182
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 3/147 (2%)
Query: 35 RVSFSRSRIRATATISE-NDSQANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK- 92
R + + S IR +A + + A P + F+ DG+ + A G K
Sbjct: 36 RSAAAVSPIRCSAASPDLSPGAPAPAPPRPQIELEFLGPKPGADGSYPVDRAAAVSGDKL 95
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN 152
LRD+M+ + I+LY Y + L NC GGG+CGTC+VE+I+GKELL RTD E LK+KP++
Sbjct: 96 LRDVMVENKIELYAAYGK-LMNCGGGGSCGTCIVEIIDGKELLSPRTDAENRYLKKKPES 154
Query: 153 WRLACQTTVGTPDSTGLVVIQQLPEWK 179
WRL CQT VG +++G VV+Q+LP+WK
Sbjct: 155 WRLTCQTIVGNKENSGKVVVQRLPQWK 181
>gi|357128564|ref|XP_003565942.1| PREDICTED: uncharacterized protein LOC100844664 [Brachypodium
distachyon]
Length = 180
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
Query: 41 SRIR-ATATISENDSQANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK-LRDIML 98
+R+R ++A+ + + + A P + F+ DG+ + A G+K LRD+ML
Sbjct: 40 TRVRCSSASPDLSPAAPSPAPPKPQIELEFLGPKAGADGSYPVDRAAAASGEKLLRDVML 99
Query: 99 NSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQ 158
+ ++LY Y + L NC GGG+CGTC+VE+I+GKELL RT E LK+KP +WRL CQ
Sbjct: 100 ENKLELYAAYGK-LMNCGGGGSCGTCIVEIIDGKELLSERTAAENRYLKKKPDSWRLTCQ 158
Query: 159 TTVGTPDSTGLVVIQQLPEWK 179
T VG +++G VV+Q+LP+WK
Sbjct: 159 TIVGNKENSGKVVVQRLPQWK 179
>gi|18418042|ref|NP_567899.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
gi|15028325|gb|AAK76639.1| unknown protein [Arabidopsis thaliana]
gi|22136786|gb|AAM91737.1| unknown protein [Arabidopsis thaliana]
gi|332660683|gb|AEE86083.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
Length = 173
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 15 SLPYNFNCTTNSHKSLKFYKRVSFSRSRI-----RATATISENDSQANAAEEPPVVNFAF 69
SL +N T ++ + + K R+R+ ++++ + Q +A P + F
Sbjct: 3 SLGFNLGFTFSNAQIQQHRKVSGGGRARVISCNSSSSSSSQASSPQGISAVTPLEIELEF 62
Query: 70 VHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV 128
DG+ + A G K LR IM ++ I+LY Y + + NC GGG+CGTC+VE+
Sbjct: 63 FGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYGKVM-NCGGGGSCGTCIVEI 121
Query: 129 IEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
++G++LL RTD E LK+KP++WRLACQT VG +++G VV+Q++P+WK
Sbjct: 122 LDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWK 172
>gi|302844552|ref|XP_002953816.1| hypothetical protein VOLCADRAFT_64100 [Volvox carteri f.
nagariensis]
gi|300260924|gb|EFJ45140.1| hypothetical protein VOLCADRAFT_64100 [Volvox carteri f.
nagariensis]
Length = 110
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR +++ +DLY + + + C G G CGTC+VEV +G ELL RT EK+KL K
Sbjct: 23 GDILRTVLMAEKVDLYTTWGK-VWQCGGVGNCGTCIVEVRDGAELLSERTPVEKKKLSGK 81
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPE 177
P WRLACQT VG +STG+V I P+
Sbjct: 82 PATWRLACQTLVGDGESTGVVTIATKPQ 109
>gi|255551138|ref|XP_002516617.1| electron carrier, putative [Ricinus communis]
gi|223544437|gb|EEF45958.1| electron carrier, putative [Ricinus communis]
Length = 171
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPLSNCAGGG 119
E P + F+ DG + A G+KL R+IM + ++LY Y + + NC GGG
Sbjct: 52 EKPEIELEFIAPKAGSDGKYPVDRVKAISGEKLLRNIMSENKLELYAAYGKVM-NCGGGG 110
Query: 120 TCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+CGTC+VE+++GK+LL +T+ E LK+K ++WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 111 SCGTCIVEILDGKDLLNEKTNTELRYLKKKAESWRLACQTIVGNKENSGKVVVQRLPQWK 170
>gi|388503094|gb|AFK39613.1| unknown [Lotus japonicus]
Length = 160
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 23 TTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEEPPVVNFAFVHSVLLPDGTPDI 82
T+ S ++ R+ S + A + E F+ P G D+
Sbjct: 13 TSGSRNPTNYFPRLQRPNSVLFAVNSPPPPPPSPPEIE------LEFIG----PKGEGDL 62
Query: 83 HFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDK 141
A G K LR+IML++ I+LY Y + L NC GGG+CGTC+VE+IEG +LL RT+
Sbjct: 63 DKAKAISGAKLLRNIMLDNKIELYATYGK-LMNCGGGGSCGTCIVEIIEGGDLLNERTNT 121
Query: 142 EKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
E LK+KP++WRLACQT VG ++ G VV+Q++P+WK
Sbjct: 122 ELRYLKKKPESWRLACQTIVGNKENCGKVVVQRIPQWK 159
>gi|224092396|ref|XP_002309590.1| predicted protein [Populus trichocarpa]
gi|222855566|gb|EEE93113.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 81/125 (64%), Gaps = 2/125 (1%)
Query: 56 ANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPLSN 114
+ ++ P + F+ DG + A G+KL R+IM ++ I+LY Y + + N
Sbjct: 54 GSVTDQKPEIELEFIGPKPEADGKYPVERAKAISGEKLLRNIMSDNKIELYATYGKVM-N 112
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQ 174
C GGG+CGTC+VE+++G +LL RT+ E LK+ P++WRLACQT VG +++G VV+Q+
Sbjct: 113 CGGGGSCGTCIVEILDGNDLLNERTNTELRYLKKNPESWRLACQTIVGNKENSGKVVVQR 172
Query: 175 LPEWK 179
+P+WK
Sbjct: 173 IPQWK 177
>gi|449441964|ref|XP_004138752.1| PREDICTED: uncharacterized protein LOC101202753 isoform 2 [Cucumis
sativus]
Length = 158
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 20/120 (16%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPLSNCAGGG 119
E P + F+ DG+ + A G KL R+IML++ ++LY PY
Sbjct: 57 EKPEIELEFIGPKPGSDGSFPVDTVKAISGDKLLRNIMLDNKLELYAPY----------- 105
Query: 120 TCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+++GK+LL RT+ E LK+KP++WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 106 --------ILDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRLPQWK 157
>gi|413920596|gb|AFW60528.1| hypothetical protein ZEAMMB73_761500 [Zea mays]
Length = 139
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Query: 77 DGTPDIHFRTACGGQKLR-DIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
DG+ + A G+KL D+M + I+LY Y + + NC GGG+CGTC+VE+I+GKELL
Sbjct: 36 DGSFPLDRAEATSGEKLLCDVMNENKIELYVAYGK-VMNCGGGGSCGTCIVEIIDGKELL 94
Query: 136 GSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
RT E + LK+KP +WRLACQT VG +++G VV+Q+LP+WK
Sbjct: 95 NERTSTENQYLKKKPDSWRLACQTIVGNKENSGKVVVQRLPQWK 138
>gi|428319051|ref|YP_007116933.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
gi|428242731|gb|AFZ08517.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
Length = 98
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + IDLY ++ + NC G G CGTC+VE++EG E L RTD E KL
Sbjct: 15 AADGANLRLKALENRIDLY-TFSGKMMNCGGYGQCGTCIVEIVEGSENLSPRTDFENRKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP+N+RLACQ TV P S
Sbjct: 74 KKKPENYRLACQATVNGPVSV 94
>gi|307152058|ref|YP_003887442.1| ferredoxin [Cyanothece sp. PCC 7822]
gi|306982286|gb|ADN14167.1| ferredoxin [Cyanothece sp. PCC 7822]
Length = 98
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L +++D+Y + L+NC G G CGTC+VE++EG E L +TD E+ KLK+K
Sbjct: 18 GANLREKALQNSVDIY-TFKGKLTNCGGYGQCGTCIVEIVEGMENLSPKTDFEQRKLKKK 76
Query: 150 PKNWRLACQTTVGTP 164
P+N+RLACQT V P
Sbjct: 77 PENYRLACQTLVNGP 91
>gi|398313925|emb|CCI55389.1| NDH subunit PnsB3 [Marchantia polymorpha]
Length = 184
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 83/135 (61%), Gaps = 6/135 (4%)
Query: 46 TATISENDSQANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDL 104
T T S + S+ + PP++ F P+ T G+K +R M + ++L
Sbjct: 53 TETASTSSSENPEQQGPPMIELQFYG----PEAGSVAQTLTVQSGEKNMRKFMTENKLEL 108
Query: 105 YGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTP 164
Y Y + + NC GGG+CGTC+V+++EG+ELL RTD E + LK+KP++WRLACQT +G
Sbjct: 109 YALYGKVM-NCGGGGSCGTCLVDILEGQELLSERTDAEYKYLKKKPESWRLACQTIIGDK 167
Query: 165 DSTGLVVIQQLPEWK 179
++G VV+Q+LP+ K
Sbjct: 168 SNSGKVVVQRLPQNK 182
>gi|113477902|ref|YP_723963.1| ferredoxin [Trichodesmium erythraeum IMS101]
gi|110168950|gb|ABG53490.1| ferredoxin [Trichodesmium erythraeum IMS101]
Length = 102
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 6/93 (6%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + +D+Y + L NC G G CGTC+VE+IEG E L RT+ E++KL
Sbjct: 16 AADGANLRLKALENRVDIY-TFTAKLMNCGGYGQCGTCVVEIIEGLENLSPRTEVEEKKL 74
Query: 147 KRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
K++P+NWRLACQ V P VV++ P+ K
Sbjct: 75 KKRPENWRLACQVLVNGP-----VVVKTKPKRK 102
>gi|427715818|ref|YP_007063812.1| ferredoxin [Calothrix sp. PCC 7507]
gi|427348254|gb|AFY30978.1| ferredoxin [Calothrix sp. PCC 7507]
Length = 98
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + ID+Y + + ++NC G G CGTC+VEV+EG + L RTD E +KL
Sbjct: 15 AADGANLRLKAIQNGIDIYTIFGK-MTNCGGYGQCGTCIVEVVEGIDNLSPRTDVENKKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP+N+RLACQT V P S
Sbjct: 74 KKKPENYRLACQTLVNGPVSV 94
>gi|302789814|ref|XP_002976675.1| hypothetical protein SELMODRAFT_59157 [Selaginella moellendorffii]
gi|300155713|gb|EFJ22344.1| hypothetical protein SELMODRAFT_59157 [Selaginella moellendorffii]
Length = 104
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Query: 77 DGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
DG D+ + G+K LR++M + ++LYG Y + L NC GGG+CGTC+VE++EG+ELL
Sbjct: 1 DGKGDVLKTSVKSGEKVLRNVMRENKLELYGLYGK-LMNCGGGGSCGTCIVEILEGQELL 59
Query: 136 GSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
T EK+ LK+KP WRLACQT VG + G VV+Q+LP+ K
Sbjct: 60 SQPTSAEKKHLKQKPGTWRLACQTIVGDKSNAGRVVVQRLPQKK 103
>gi|427722683|ref|YP_007069960.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427354403|gb|AFY37126.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 106
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + +D+Y + L NC G G C TCMVEV+EG E L RTD E+ +LK++
Sbjct: 21 GSNLREKALQNGVDIY-TFGAKLMNCGGVGQCATCMVEVVEGMENLSPRTDFEERRLKKR 79
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
P N+RLACQ+ V G VV++ P+ K
Sbjct: 80 PDNYRLACQSIV-----NGRVVVKTKPKRK 104
>gi|302782810|ref|XP_002973178.1| hypothetical protein SELMODRAFT_59158 [Selaginella moellendorffii]
gi|300158931|gb|EFJ25552.1| hypothetical protein SELMODRAFT_59158 [Selaginella moellendorffii]
Length = 104
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Query: 77 DGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
DG D+ + G+K LR++M + ++LYG Y + L NC GGG+CGTC+VE++EG+ELL
Sbjct: 1 DGKGDVLKTSVKSGEKVLRNVMRENKLELYGLYGK-LMNCGGGGSCGTCIVEILEGQELL 59
Query: 136 GSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
T EK+ LK+KP WRLACQT VG + G VV+Q+LP+ K
Sbjct: 60 SQPTSAEKKHLKQKPGTWRLACQTIVGDKSNAGKVVVQRLPQKK 103
>gi|428768942|ref|YP_007160732.1| ferredoxin [Cyanobacterium aponinum PCC 10605]
gi|428683221|gb|AFZ52688.1| ferredoxin [Cyanobacterium aponinum PCC 10605]
Length = 98
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ L +NID+Y + L NC G G C TC+VE++EG E L +TD E K
Sbjct: 14 VAADGANLREKALQNNIDIY-KWRGKLINCGGYGQCATCVVEIVEGMENLSPKTDFETRK 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 73 LKKKPENYRLACQTLVNGPISV 94
>gi|218440428|ref|YP_002378757.1| ferredoxin [Cyanothece sp. PCC 7424]
gi|218173156|gb|ACK71889.1| ferredoxin [Cyanothece sp. PCC 7424]
Length = 98
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L ++ID+Y + L+NC G G CGTC+VE++EG E L +TD E+ KLK+K
Sbjct: 18 GANLREKALQNSIDIY-TFKGKLTNCGGYGQCGTCIVEIVEGMENLSPKTDFEQRKLKKK 76
Query: 150 PKNWRLACQTTVGTP 164
P+ +RLACQT V P
Sbjct: 77 PETYRLACQTLVNGP 91
>gi|254413036|ref|ZP_05026808.1| hypothetical protein MC7420_2196 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180200|gb|EDX75192.1| hypothetical protein MC7420_2196 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 98
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ L + IDLY + L NC G G CGTC+VEV+EG E L RT+ E+ KL
Sbjct: 15 AADGANLREKALQNKIDLY-TFKGKLMNCGGYGQCGTCIVEVVEGMENLSPRTEVEQRKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP+++RLACQ V P S
Sbjct: 74 KKKPESYRLACQALVNGPVSV 94
>gi|427737730|ref|YP_007057274.1| ferredoxin [Rivularia sp. PCC 7116]
gi|427372771|gb|AFY56727.1| ferredoxin [Rivularia sp. PCC 7116]
Length = 98
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + +NID+Y + + + NC G G CGTC+VE+ EG E L RTD EK+ L
Sbjct: 15 AADGANLRLKAIQNNIDIYKVWGK-MMNCGGAGQCGTCIVEITEGMENLSPRTDAEKKIL 73
Query: 147 KRKPKNWRLACQTTV 161
K+KP+N+RLACQT V
Sbjct: 74 KKKPENYRLACQTLV 88
>gi|440683793|ref|YP_007158588.1| ferredoxin [Anabaena cylindrica PCC 7122]
gi|428680912|gb|AFZ59678.1| ferredoxin [Anabaena cylindrica PCC 7122]
Length = 98
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR + +NID+Y + ++NC G G CGTC+V+V+EG E L RTD E K K+K
Sbjct: 18 GANLRLKAMENNIDIYTLIGK-MTNCGGAGQCGTCIVQVVEGLENLSPRTDFENRKFKKK 76
Query: 150 PKNWRLACQTTVGTPDST 167
P N+RLACQT V P S
Sbjct: 77 PDNYRLACQTLVNGPVSV 94
>gi|428305234|ref|YP_007142059.1| ferredoxin [Crinalium epipsammum PCC 9333]
gi|428246769|gb|AFZ12549.1| ferredoxin [Crinalium epipsammum PCC 9333]
Length = 98
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ +L + IDLY + L NC G G CGTC+VE++EG E L RT+ E KLK+K
Sbjct: 18 GANLREKILENGIDLY-TFKGKLMNCGGYGQCGTCVVEIVEGLENLSPRTEFENSKLKKK 76
Query: 150 PKNWRLACQTTV 161
P+N+RLACQT V
Sbjct: 77 PENYRLACQTIV 88
>gi|119509735|ref|ZP_01628880.1| Ferredoxin [Nodularia spumigena CCY9414]
gi|119465601|gb|EAW46493.1| Ferredoxin [Nodularia spumigena CCY9414]
Length = 98
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + ID+Y + ++NC G G CGTC+VE++EG E L RT+ E +K
Sbjct: 15 AADGANLRLKAMENGIDIY-KFIGKMTNCGGAGQCGTCIVEIVEGMENLSPRTNVENQKF 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP N+RLACQT V P S
Sbjct: 74 KKKPDNYRLACQTLVNGPVSV 94
>gi|388506454|gb|AFK41293.1| unknown [Lotus japonicus]
Length = 83
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Query: 97 MLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLA 156
ML++ I+LY Y + L NC GGG+CGTC+VE+IEG +LL RT+ E LK+KP++WRLA
Sbjct: 1 MLDNKIELYATYGK-LMNCGGGGSCGTCIVEIIEGDDLLNERTNTELRYLKKKPESWRLA 59
Query: 157 CQTTVGTPDSTGLVVIQQLPEWK 179
CQT VG ++ G VV+Q++P+WK
Sbjct: 60 CQTIVGNKENCGKVVVQRIPQWK 82
>gi|334117084|ref|ZP_08491176.1| ferredoxin [Microcoleus vaginatus FGP-2]
gi|333461904|gb|EGK90509.1| ferredoxin [Microcoleus vaginatus FGP-2]
Length = 98
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + IDLY ++ L NC G G CGTC+VE++EG E L RTD E KL
Sbjct: 15 AADGANLRLKALENRIDLY-TFSGKLMNCGGIGQCGTCIVEIVEGSENLSPRTDFENRKL 73
Query: 147 KRKPKNWRLACQTTV 161
K+KP+N+RLACQ V
Sbjct: 74 KKKPENYRLACQAMV 88
>gi|443478291|ref|ZP_21068062.1| ferredoxin [Pseudanabaena biceps PCC 7429]
gi|443016435|gb|ELS31096.1| ferredoxin [Pseudanabaena biceps PCC 7429]
Length = 99
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L +NID+Y A+ L+NC G G C TC VE++EG E L RT+ E++KL
Sbjct: 15 AMDGANLRIKALENNIDIYKFVAK-LTNCNGYGQCATCTVEIVEGLENLSPRTEFEEKKL 73
Query: 147 KRKPKNWRLACQTTV 161
K KPKN+RLACQT V
Sbjct: 74 KNKPKNYRLACQTLV 88
>gi|425469540|ref|ZP_18848466.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9701]
gi|389880592|emb|CCI38670.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9701]
Length = 99
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L +RTD E+
Sbjct: 14 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGMENLSARTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 73 LKKKPENYRLACQTMVNGPISV 94
>gi|86607779|ref|YP_476541.1| (Fe-S)-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556321|gb|ABD01278.1| iron-sulfur cluster-binding protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 98
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L + IDLY A+ L NC G G CGTC+VE++EG E L RT+ E KLKRK
Sbjct: 18 GANLRLKALENQIDLYKMMAKLL-NCGGNGQCGTCVVEIVEGSENLSPRTEAENRKLKRK 76
Query: 150 PKNWRLACQTTV 161
P ++RLACQT V
Sbjct: 77 PDSYRLACQTKV 88
>gi|425434873|ref|ZP_18815337.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9432]
gi|425448817|ref|ZP_18828661.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
7941]
gi|440754831|ref|ZP_20934033.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
gi|389675466|emb|CCH95407.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9432]
gi|389768746|emb|CCI06242.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
7941]
gi|440175037|gb|ELP54406.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
Length = 99
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y ++ L NC G G CGTC+V ++EG E L +RTD E+
Sbjct: 14 VAADGANLREKAVQNGVDIY-TFSGKLMNCGGYGQCGTCIVAIVEGMENLSARTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 73 LKKKPENYRLACQTMVNGPISV 94
>gi|186680809|ref|YP_001864005.1| ferredoxin [Nostoc punctiforme PCC 73102]
gi|186463261|gb|ACC79062.1| ferredoxin [Nostoc punctiforme PCC 73102]
Length = 98
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR + ++ID+Y + ++NC G G CGTC+VE++EG E L RTD E K
Sbjct: 14 VAADGANLRLKAMQNDIDIY-TFIGKMTNCGGNGQCGTCIVEIVEGLENLSPRTDVENRK 72
Query: 146 LKRKPKNWRLACQTTV 161
K+KP+N+RLACQT V
Sbjct: 73 FKKKPENYRLACQTLV 88
>gi|119485082|ref|ZP_01619467.1| probable ferredoxin [Lyngbya sp. PCC 8106]
gi|119457310|gb|EAW38435.1| probable ferredoxin [Lyngbya sp. PCC 8106]
Length = 98
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L IDLY + + NC G G CGTC+VEV+EG E L RTD EK L
Sbjct: 15 AADGANLRIKALEKQIDLY-TFMGKMMNCGGYGQCGTCIVEVVEGMENLSPRTDTEKRIL 73
Query: 147 KRKPKNWRLACQTTVGTP 164
K+KP ++RLACQT V P
Sbjct: 74 KKKPDSYRLACQTMVNGP 91
>gi|427708184|ref|YP_007050561.1| ferredoxin [Nostoc sp. PCC 7107]
gi|427360689|gb|AFY43411.1| ferredoxin [Nostoc sp. PCC 7107]
Length = 98
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + IDLY + + ++NC G G CGTC+VE++EG E L RT+ E K
Sbjct: 15 AANGANLRLKAVENGIDLYTLFGK-MTNCGGYGQCGTCVVEIVEGLENLSPRTEVENRKF 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP+N+RLACQT V P S
Sbjct: 74 KKKPENYRLACQTVVHGPVSV 94
>gi|428210463|ref|YP_007094816.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
gi|428012384|gb|AFY90947.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
Length = 114
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + IDLY + + + NC G G CGTC+VE++EG E L RT E +KL
Sbjct: 30 AADGANLRIKALENGIDLYTTWGK-MMNCGGYGQCGTCIVEIVEGVENLSPRTPVENKKL 88
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP N+RLACQT V P S
Sbjct: 89 KKKPANYRLACQTLVNGPVSV 109
>gi|86605357|ref|YP_474120.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86553899|gb|ABC98857.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 98
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L + IDLY A+ L NC G G CGTC+VE++EG E L RT+ E KLKRK
Sbjct: 18 GANLRLKALENQIDLYKMMAK-LLNCGGNGQCGTCVVEIVEGAENLSPRTEAENRKLKRK 76
Query: 150 PKNWRLACQTTV 161
P +RLACQT V
Sbjct: 77 PDTYRLACQTKV 88
>gi|434394461|ref|YP_007129408.1| ferredoxin [Gloeocapsa sp. PCC 7428]
gi|428266302|gb|AFZ32248.1| ferredoxin [Gloeocapsa sp. PCC 7428]
Length = 98
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 80 PDIHFR------TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE 133
P+I F A G LR + + ID+Y Y + + NC G G CGTC+VE+ +G E
Sbjct: 2 PNIKFEKENREVVAADGANLRLKAMENGIDIYKFYGK-MMNCGGYGQCGTCIVEITQGME 60
Query: 134 LLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDST 167
L RT+ E KLK+KPKN+RLACQ V P S
Sbjct: 61 NLSPRTEVEDRKLKKKPKNYRLACQALVNGPVSV 94
>gi|126656797|ref|ZP_01728011.1| hydrogenase component [Cyanothece sp. CCY0110]
gi|126622017|gb|EAZ92725.1| hydrogenase component [Cyanothece sp. CCY0110]
Length = 103
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + +D+Y + L NC G G CGTC+VE+ EG E L RTD EK LK+K
Sbjct: 22 GANLREKALQNKVDIY-TFKGKLMNCGGYGQCGTCIVEIAEGMENLSPRTDFEKRVLKKK 80
Query: 150 PKNWRLACQTTVGTP 164
P N+RLACQT V P
Sbjct: 81 PDNYRLACQTIVNGP 95
>gi|332712347|ref|ZP_08432274.1| ferredoxin [Moorea producens 3L]
gi|332348821|gb|EGJ28434.1| ferredoxin [Moorea producens 3L]
Length = 109
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ ML + IDLY + L NC G G CGTC+VE++ G E L RT+ E KL
Sbjct: 15 AANGANLREKMLQNRIDLY-TFRGKLVNCGGYGQCGTCIVEIVAGIENLSPRTEVENRKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP +RLACQ V P S
Sbjct: 74 KKKPDTYRLACQVLVNGPVSV 94
>gi|49328038|gb|AAT58739.1| unknown protein [Oryza sativa Japonica Group]
gi|215693131|dbj|BAG88513.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 1 MGSLQLNSYRLASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRAT------ATISENDS 54
M + S L S ++P + +T H+ F +RIR + A+ +
Sbjct: 1 MAATSSTSTALFSLAIPSSRVVSTRGHRKAS-SGSGPFRAARIRCSNAASPNASAGAASA 59
Query: 55 QANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLS 113
+ A P ++ FV DG+ + A G+K LRD+M+ + I+LY Y + +
Sbjct: 60 EEAAPPPKPQIDLEFVGPKADADGSFPVDRAAAGSGEKLLRDVMVENKIELYAAYGKVM- 118
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQ 173
NC GGG+CGTC+VE+++GKELL RT+ E LK+KP++WRLACQT VG +++G
Sbjct: 119 NCGGGGSCGTCIVEIVDGKELLNERTNTENRYLKKKPESWRLACQTIVGNKENSGKYKTT 178
Query: 174 QLPEWK 179
+P+ +
Sbjct: 179 SIPQER 184
>gi|166367272|ref|YP_001659545.1| ferredoxin [Microcystis aeruginosa NIES-843]
gi|425441620|ref|ZP_18821890.1| Ferredoxin [Microcystis aeruginosa PCC 9717]
gi|166089645|dbj|BAG04353.1| ferredoxin [Microcystis aeruginosa NIES-843]
gi|389717599|emb|CCH98322.1| Ferredoxin [Microcystis aeruginosa PCC 9717]
Length = 99
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L ++TD E+
Sbjct: 14 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGMENLSAKTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT+V P S
Sbjct: 73 LKKKPENYRLACQTSVNGPISV 94
>gi|428219075|ref|YP_007103540.1| ferredoxin [Pseudanabaena sp. PCC 7367]
gi|427990857|gb|AFY71112.1| ferredoxin [Pseudanabaena sp. PCC 7367]
Length = 98
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + ID+Y + L+NC G G CGTC+VE+ EG E L RT+ E KL
Sbjct: 15 ATDGANLRQKAIENGIDIY-KFVGKLTNCGGYGQCGTCIVEINEGMEHLSPRTNAEDRKL 73
Query: 147 KRKPKNWRLACQTTV 161
KRKP N+RLACQT V
Sbjct: 74 KRKPDNYRLACQTMV 88
>gi|218247644|ref|YP_002373015.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|257061021|ref|YP_003138909.1| ferredoxin [Cyanothece sp. PCC 8802]
gi|218168122|gb|ACK66859.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|256591187|gb|ACV02074.1| ferredoxin [Cyanothece sp. PCC 8802]
Length = 97
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + ID+Y + L+NC G G CGTC+VE++EG E L RTD E+ LK+K
Sbjct: 17 GANLREKALQNKIDIY-TFKGKLTNCGGYGQCGTCIVEIVEGMENLSPRTDFEQRVLKKK 75
Query: 150 PKNWRLACQTTVGTP 164
P ++RLACQT V P
Sbjct: 76 PDSYRLACQTLVNGP 90
>gi|300865224|ref|ZP_07110041.1| ferredoxin [Oscillatoria sp. PCC 6506]
gi|300336789|emb|CBN55191.1| ferredoxin [Oscillatoria sp. PCC 6506]
Length = 98
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + +DLY ++ + NC G G CGTC+VE++EG E L RTD E KL
Sbjct: 15 AADGANLRLKALENRVDLY-TFSGKMMNCGGYGQCGTCIVEIVEGMEHLSPRTDVENRKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP +RLACQT V P S
Sbjct: 74 KKKPPTYRLACQTLVNGPVSV 94
>gi|170078750|ref|YP_001735388.1| putative ferredoxin (2Fe-2S) [Synechococcus sp. PCC 7002]
gi|169886419|gb|ACB00133.1| putative ferredoxin (2Fe-2S) [Synechococcus sp. PCC 7002]
Length = 98
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 6/90 (6%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ L + +DLY + L NC G G CGTC+VE++EG E L +TD EK +L
Sbjct: 15 AADGANLREKALQNGVDLY-TFGGKLMNCGGVGQCGTCIVEILEGMENLSPKTDFEKRRL 73
Query: 147 KRKPKNWRLACQTTVGTPDSTGLVVIQQLP 176
KRKP ++RLACQT + G VV++ P
Sbjct: 74 KRKPPSYRLACQTL-----AHGDVVVKTKP 98
>gi|242091313|ref|XP_002441489.1| hypothetical protein SORBIDRAFT_09g027890 [Sorghum bicolor]
gi|241946774|gb|EES19919.1| hypothetical protein SORBIDRAFT_09g027890 [Sorghum bicolor]
Length = 185
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 12 ASYSLPYNFNCTTNSHKSLKFYKRVSFSRSRIRATATISENDSQANAAEE--PPVVNFAF 69
A SLP+ + + + S ++ R+ ++ S N SQ A P + F
Sbjct: 10 ALASLPFAASTSASPRVSGSGHRGPRRFRAGTVRCSSASPNVSQGAPAPALPKPQIELEF 69
Query: 70 VHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV 128
V DG+ + A G+K LRDIM + I+LY Y + + NC GGG+CGTC+VE+
Sbjct: 70 VGPKPGADGSFPVDRAEAASGEKLLRDIMNENKIELYAAYGK-VMNCGGGGSCGTCIVEI 128
Query: 129 IEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLP 176
I+GKELL RT+ E LK+KP +WRLACQT VG +++G LP
Sbjct: 129 IDGKELLNERTNTENRYLKKKPDSWRLACQTIVGNKENSGKACFILLP 176
>gi|158335182|ref|YP_001516354.1| 2Fe-2S type ferredoxin [Acaryochloris marina MBIC11017]
gi|158305423|gb|ABW27040.1| ferredoxin, 2Fe-2S type [Acaryochloris marina MBIC11017]
Length = 99
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN 152
LR + L++ IDLY + L NC G G CGTC++EV+EG E L RT E KLKRKP+
Sbjct: 21 LRSVALDNKIDLY-TFKGKLMNCGGYGQCGTCLIEVVEGMENLSPRTPVEDAKLKRKPET 79
Query: 153 WRLACQTTV 161
+RLACQT V
Sbjct: 80 YRLACQTLV 88
>gi|434405978|ref|YP_007148863.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
gi|428260233|gb|AFZ26183.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
Length = 98
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR + + ID+Y + ++NC G G C TC+VE++EG E L RTD E +K
Sbjct: 14 VAADGANLRLKAIENGIDIY-TFLSKMTNCGGYGQCATCVVEIVEGLENLSPRTDVENKK 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
K+KP+N+RLACQT V P S
Sbjct: 73 FKKKPENYRLACQTLVNGPVSV 94
>gi|390438834|ref|ZP_10227269.1| Ferredoxin [Microcystis sp. T1-4]
gi|389837757|emb|CCI31393.1| Ferredoxin [Microcystis sp. T1-4]
Length = 99
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L ++TD E+
Sbjct: 14 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGMENLSAKTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 73 LKKKPENYRLACQTIVNGPISV 94
>gi|359460292|ref|ZP_09248855.1| 2Fe-2S type ferredoxin [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN 152
LR + L++ IDLY + L NC G G CGTC++EV+EG E L RT E KLKRKP+
Sbjct: 21 LRSVALDNKIDLY-TFKGKLMNCGGYGQCGTCLIEVVEGMENLSPRTPVEDAKLKRKPET 79
Query: 153 WRLACQTTV 161
+RLACQT V
Sbjct: 80 YRLACQTLV 88
>gi|428211944|ref|YP_007085088.1| ferredoxin [Oscillatoria acuminata PCC 6304]
gi|428000325|gb|AFY81168.1| ferredoxin [Oscillatoria acuminata PCC 6304]
Length = 98
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 80 PDIHFR------TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE 133
P+I F A G LR L + I+LY + L NC G G CGTC+VEV+EG E
Sbjct: 2 PNIKFVDENKEVVAADGANLRLKALENGIELY-KFVGKLMNCGGYGQCGTCIVEVVEGME 60
Query: 134 LLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDST 167
L RT E +KLK+KP ++RLACQT V P S
Sbjct: 61 NLSDRTPAENQKLKKKPPSYRLACQTLVNGPVSV 94
>gi|425459016|ref|ZP_18838502.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9808]
gi|389823314|emb|CCI28567.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9808]
Length = 99
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L ++TD E+
Sbjct: 14 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGMENLSAKTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 73 LKKKPENYRLACQTMVNGPISV 94
>gi|354555045|ref|ZP_08974348.1| ferredoxin [Cyanothece sp. ATCC 51472]
gi|353553199|gb|EHC22592.1| ferredoxin [Cyanothece sp. ATCC 51472]
Length = 98
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + +D+Y + L NC G G CGTC+VE+ EG E L RTD EK LK+K
Sbjct: 17 GANLREKALQNKVDIYTLKGK-LMNCGGYGQCGTCIVEIAEGMENLSPRTDFEKRVLKKK 75
Query: 150 PKNWRLACQTTVGTP 164
P N+RLACQT V P
Sbjct: 76 PDNYRLACQTIVNGP 90
>gi|17228379|ref|NP_484927.1| hypothetical protein asl0884 [Nostoc sp. PCC 7120]
gi|17130229|dbj|BAB72841.1| asl0884 [Nostoc sp. PCC 7120]
Length = 98
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR +++ +D+Y + + L+NC G G CGTC+VE++EG E L + TD E L
Sbjct: 15 AADGANLRLKAMDNGVDIYKLFGK-LTNCGGVGQCGTCIVEIVEGIENLSTPTDVENRML 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP N+RLACQT V P S
Sbjct: 74 KKKPANYRLACQTLVNGPVSV 94
>gi|15638595|gb|AAL05047.1|AF410434_1 putative [2Fe-2S] ferredoxin [Anabaena variabilis ATCC 29413]
Length = 99
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR +++ +D+Y + + L+NC G G CGTC+VE++EG E L + TD E L
Sbjct: 15 AADGANLRLKAMDNGVDIYKFFGK-LTNCGGVGQCGTCIVEIVEGIENLSTPTDVENRML 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP N+RLACQT V P S
Sbjct: 74 KKKPANYRLACQTLVNGPVSV 94
>gi|428203760|ref|YP_007082349.1| ferredoxin [Pleurocapsa sp. PCC 7327]
gi|427981192|gb|AFY78792.1| ferredoxin [Pleurocapsa sp. PCC 7327]
Length = 98
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ L + ID+Y + L+NC G G CGTC+VE++EG E L +TD E KL
Sbjct: 15 AADGANLREKALQNRIDIYTLKGK-LTNCGGYGQCGTCIVEIVEGMENLSPKTDFELRKL 73
Query: 147 KRKPKNWRLACQTTVGTP 164
K+KP+++RLACQT V P
Sbjct: 74 KKKPESYRLACQTLVNGP 91
>gi|22299072|ref|NP_682319.1| ferredoxin [Thermosynechococcus elongatus BP-1]
gi|22295254|dbj|BAC09081.1| tll1529 [Thermosynechococcus elongatus BP-1]
Length = 108
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR + + +DLY + L NC G G CGTC+VE++EG E L RT E+ K
Sbjct: 22 VAANGANLRLKAMEAGVDLYTLKGK-LFNCGGYGQCGTCIVEIVEGMEHLSPRTPVEERK 80
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
L+RKP+N+RLACQT V P S
Sbjct: 81 LRRKPENYRLACQTLVYGPVSV 102
>gi|172035808|ref|YP_001802309.1| ferredoxin [Cyanothece sp. ATCC 51142]
gi|171697262|gb|ACB50243.1| probable ferredoxin [Cyanothece sp. ATCC 51142]
Length = 111
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + +D+Y + L NC G G CGTC+VE+ EG E L RTD EK LK+K
Sbjct: 30 GANLREKALQNKVDIYTLKGK-LMNCGGYGQCGTCIVEIAEGMENLSPRTDFEKRVLKKK 88
Query: 150 PKNWRLACQTTVGTP 164
P N+RLACQT V P
Sbjct: 89 PDNYRLACQTIVNGP 103
>gi|75910684|ref|YP_324980.1| ferredoxin [Anabaena variabilis ATCC 29413]
gi|75704409|gb|ABA24085.1| Ferredoxin [Anabaena variabilis ATCC 29413]
Length = 98
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR +++ +D+Y + + L+NC G G CGTC+VE++EG E L + TD E L
Sbjct: 15 AADGANLRLKAMDNGVDIYKFFGK-LTNCGGVGQCGTCIVEIVEGIENLSTPTDVENRML 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP N+RLACQT V P S
Sbjct: 74 KKKPANYRLACQTLVNGPVSV 94
>gi|425445104|ref|ZP_18825142.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9443]
gi|425455367|ref|ZP_18835087.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9807]
gi|159029269|emb|CAO90135.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389734974|emb|CCI01444.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9443]
gi|389803771|emb|CCI17346.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9807]
Length = 99
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L ++TD E+
Sbjct: 14 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGLENLSAKTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 73 LKKKPENYRLACQTMVNGPISV 94
>gi|443323311|ref|ZP_21052319.1| ferredoxin [Gloeocapsa sp. PCC 73106]
gi|442787049|gb|ELR96774.1| ferredoxin [Gloeocapsa sp. PCC 73106]
Length = 98
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + IDLY + L NC G G CGTC+VE++ G E L TD EK KLK+K
Sbjct: 18 GANLREKALQNGIDLYTLKGK-LMNCGGYGQCGTCIVEIVAGMENLSDPTDFEKRKLKKK 76
Query: 150 PKNWRLACQTTVGTP 164
P N+RLACQT V P
Sbjct: 77 PGNYRLACQTLVNGP 91
>gi|428223240|ref|YP_007107410.1| ferredoxin [Synechococcus sp. PCC 7502]
gi|427996580|gb|AFY75275.1| ferredoxin [Synechococcus sp. PCC 7502]
Length = 98
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + +N+D+Y + L+NC G G CGTC+VE+ EG E L RTD E KL
Sbjct: 15 AMDGVNLRIKAIENNVDIY-KFMGKLTNCGGYGQCGTCVVEITEGIENLSPRTDFETFKL 73
Query: 147 KRKPKNWRLACQTTV 161
KRKP N+RLACQ V
Sbjct: 74 KRKPDNYRLACQVVV 88
>gi|427727646|ref|YP_007073883.1| ferredoxin [Nostoc sp. PCC 7524]
gi|427363565|gb|AFY46286.1| ferredoxin [Nostoc sp. PCC 7524]
Length = 98
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + ID+Y + + L+NC G G CGTC+VE++EG E L + TD E L
Sbjct: 15 AADGANLRLKAMENGIDIYKFFGK-LTNCGGYGQCGTCVVEIVEGVENLSTPTDVENRML 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP N+RLACQT V P S
Sbjct: 74 KKKPANYRLACQTLVNGPVSV 94
>gi|428776449|ref|YP_007168236.1| ferredoxin [Halothece sp. PCC 7418]
gi|428690728|gb|AFZ44022.1| ferredoxin [Halothece sp. PCC 7418]
Length = 102
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 16/105 (15%)
Query: 64 VVNFAFVHS---VLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
+ N F+H V+ DGT LR+ L + IDLY + + NC G G
Sbjct: 1 MANIKFIHEDQQVIAADGT------------NLREKALENRIDLY-TFKGKMLNCGGYGQ 47
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPD 165
CGTC+VEV EG E L RT E++KLK+KP +RL+CQT V + +
Sbjct: 48 CGTCVVEVAEGMENLSERTPAEQQKLKKKPDTYRLSCQTIVNSGE 92
>gi|422303428|ref|ZP_16390779.1| Ferredoxin [Microcystis aeruginosa PCC 9806]
gi|389791616|emb|CCI12598.1| Ferredoxin [Microcystis aeruginosa PCC 9806]
Length = 99
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L +TD E+
Sbjct: 14 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGMENLSVKTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 73 LKKKPENYRLACQTIVNGPISV 94
>gi|425463476|ref|ZP_18842813.1| Ferredoxin [Microcystis aeruginosa PCC 9809]
gi|389832414|emb|CCI23991.1| Ferredoxin [Microcystis aeruginosa PCC 9809]
Length = 99
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L +TD E+
Sbjct: 14 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGLENLSVKTDFEQRC 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT+V P S
Sbjct: 73 LKKKPENYRLACQTSVNGPISV 94
>gi|388492882|gb|AFK34507.1| unknown [Medicago truncatula]
Length = 163
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 77 DGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV---IEGK 132
DG+ + A G+KL R IM ++ IDLY Y + ++ GG + IEGK
Sbjct: 60 DGSFPVDKVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSC----GTCIVEIIEGK 115
Query: 133 ELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+LL RT+ E + LK+KP++WRLACQT VG +++G VV+Q++P+WK
Sbjct: 116 DLLNERTNTELKYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWK 162
>gi|357436821|ref|XP_003588686.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
gi|355477734|gb|AES58937.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
Length = 182
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 77 DGTPDIHFRTACGGQKL-RDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV---IEGK 132
DG+ + A G+KL R IM ++ IDLY Y + ++ GG + IEGK
Sbjct: 79 DGSFPVDKVKAISGEKLMRSIMSDNKIDLYATYGKLMNCGGGGSC----GTCIVEIIEGK 134
Query: 133 ELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+LL RT+ E + LK+KP++WRLACQT VG +++G VV+Q++P+WK
Sbjct: 135 DLLNERTNTELKYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQWK 181
>gi|56750841|ref|YP_171542.1| ferredoxin [Synechococcus elongatus PCC 6301]
gi|81299509|ref|YP_399717.1| ferredoxin [Synechococcus elongatus PCC 7942]
gi|56685800|dbj|BAD79022.1| probable ferredoxin [Synechococcus elongatus PCC 6301]
gi|81168390|gb|ABB56730.1| probable ferredoxin [Synechococcus elongatus PCC 7942]
Length = 144
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + +DLY + + NC G G CGTC+VE+++G E L RT E+ KL
Sbjct: 15 AADGANLRFKAVENQVDLYT-FGGKMMNCGGYGQCGTCIVEIVQGAENLSPRTSFEERKL 73
Query: 147 KRKPKNWRLACQTTVGTP 164
KRKP ++RLACQ TV P
Sbjct: 74 KRKPDSYRLACQATVNGP 91
>gi|443658268|ref|ZP_21132086.1| putative ferredoxin [Microcystis aeruginosa DIANCHI905]
gi|443332930|gb|ELS47510.1| putative ferredoxin [Microcystis aeruginosa DIANCHI905]
Length = 87
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR+ + + +D+Y + L NC G G CGTC+V ++EG E L ++TD E+
Sbjct: 2 VAADGANLREKAIQNGVDIY-TFGGKLMNCGGYGQCGTCIVAIVEGLENLSAKTDFEQRC 60
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK+KP+N+RLACQT V P S
Sbjct: 61 LKKKPENYRLACQTMVNGPISV 82
>gi|303275882|ref|XP_003057235.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461587|gb|EEH58880.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 163
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 65/143 (45%), Gaps = 13/143 (9%)
Query: 44 RATATISENDSQANAAEEPP---------VVNFAFVHSVLLPDGTPDIHFRTACGGQKLR 94
R A+++ + A+ A P V + V P D+ LR
Sbjct: 19 RGGASVTTRRASAHPARATPSSRSRSAALVARASVVRVEFTPSDGGDVIVTDVTKASVLR 78
Query: 95 DIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWR 154
D+ L + LY A+ L NC G G CGTC V V EG ELL RTD E KLK ++WR
Sbjct: 79 DVALGDKVQLYEGMAKLL-NCGGMGNCGTCKVRVTEGMELLSPRTDAENGKLKGLGEDWR 137
Query: 155 LACQTTVG---TPDSTGLVVIQQ 174
LACQ VG P+ L V+ +
Sbjct: 138 LACQCLVGGDTAPEGAVLKVVNK 160
>gi|427714040|ref|YP_007062664.1| ferredoxin [Synechococcus sp. PCC 6312]
gi|427378169|gb|AFY62121.1| ferredoxin [Synechococcus sp. PCC 6312]
Length = 107
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Query: 56 ANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNC 115
A+ E+ V N FV +G + A G LR L + IDLY + L NC
Sbjct: 2 ASTIEDVRVTNITFVK-----EGKEVV----AATGANLRLRALEAGIDLYTLKGK-LMNC 51
Query: 116 AGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTP 164
G G CGTC+VE++EG E L RT E KLK+KP+++RLACQT V P
Sbjct: 52 NGYGQCGTCIVEIVEGMENLSERTPVENRKLKKKPESFRLACQTKVNGP 100
>gi|428314377|ref|YP_007125354.1| ferredoxin [Microcoleus sp. PCC 7113]
gi|428255989|gb|AFZ21948.1| ferredoxin [Microcoleus sp. PCC 7113]
Length = 100
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ L + IDLY + + NC G G CGTC+VEV +G E L RTD E KL
Sbjct: 15 AANGANLREKALQNGIDLY-TFTGKMMNCGGYGQCGTCIVEVTDGIENLSPRTDVENRKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP +RLACQ V P S
Sbjct: 74 KKKPDTYRLACQALVNGPVSV 94
>gi|298489968|ref|YP_003720145.1| ferredoxin ['Nostoc azollae' 0708]
gi|298231886|gb|ADI63022.1| ferredoxin ['Nostoc azollae' 0708]
Length = 98
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR + + ID+Y + ++NC G G C TC+VEV+EG E L RTD E K
Sbjct: 14 VAADGANLRLKAIENGIDIY-KFLGKMTNCGGYGQCATCIVEVVEGLENLSPRTDFENRK 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
K KP N+RLACQT V P S
Sbjct: 73 FKNKPDNYRLACQTMVNGPVSV 94
>gi|443329424|ref|ZP_21058010.1| ferredoxin [Xenococcus sp. PCC 7305]
gi|442790976|gb|ELS00477.1| ferredoxin [Xenococcus sp. PCC 7305]
Length = 111
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + ID+Y + L+NC G G CGTC+VE++EG E L RT E+ KLK+K
Sbjct: 23 GANLRERALENKIDIYTLKGK-LTNCGGYGQCGTCVVEIVEGMENLSPRTAFEQRKLKKK 81
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
P ++RLACQ TV G V + P+ K
Sbjct: 82 PDSYRLACQATV-----NGSVTVATKPKLK 106
>gi|354565784|ref|ZP_08984958.1| ferredoxin [Fischerella sp. JSC-11]
gi|353548657|gb|EHC18102.1| ferredoxin [Fischerella sp. JSC-11]
Length = 99
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + ID+Y + + + NC G G CGTC+VE+IEG+E L T E L
Sbjct: 15 AADGANLRQKALENGIDIYKLWGK-MMNCGGYGQCGTCIVEIIEGRENLSPPTQAENRFL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP N+RLACQT V P S
Sbjct: 74 KKKPANYRLACQTVVNGPVSV 94
>gi|428778861|ref|YP_007170647.1| ferredoxin [Dactylococcopsis salina PCC 8305]
gi|428693140|gb|AFZ49290.1| ferredoxin [Dactylococcopsis salina PCC 8305]
Length = 102
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ L + +D+Y + + NC G G CGTC+VEV+EG E L RT E++KL
Sbjct: 15 AADGANLREKALENRVDIY-TFRGKMLNCGGYGQCGTCVVEVVEGMENLSERTPAEQKKL 73
Query: 147 KRKPKNWRLACQTTVGTPD 165
K+KP ++RL+CQT V D
Sbjct: 74 KKKPDSYRLSCQTIVNHGD 92
>gi|168013122|ref|XP_001759250.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689563|gb|EDQ75934.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 83/131 (63%), Gaps = 7/131 (5%)
Query: 42 RIRATATISENDSQANAAE-EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQK-LRDIMLN 99
++R + S S +A + PP ++ V P+ ++ + G+K LR+I+L
Sbjct: 44 KLRCSIEESNVSSSPSAVDLAPPTIDLEIVG----PEAGGEVTTTSVGSGEKLLRNIILE 99
Query: 100 SNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQT 159
+ ++LYG Y + + NC GGG+CGTC+VE++EGKELL RTD E + LK+KP++WRL+CQT
Sbjct: 100 NKLELYGLYGKVM-NCGGGGSCGTCVVEILEGKELLNERTDTEYKYLKKKPESWRLSCQT 158
Query: 160 TVGTPDSTGLV 170
VG ++G V
Sbjct: 159 IVGDKSNSGKV 169
>gi|416385264|ref|ZP_11684743.1| Ferredoxin [Crocosphaera watsonii WH 0003]
gi|357264902|gb|EHJ13729.1| Ferredoxin [Crocosphaera watsonii WH 0003]
Length = 98
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + +D+Y + L NC G G CGTC+VE++EG + RTD E+ LK+K
Sbjct: 17 GANLREKALQNKVDIY-TFKGKLMNCGGYGQCGTCLVEIVEGMGNVSPRTDFEQRVLKKK 75
Query: 150 PKNWRLACQTTVGTP 164
P N+RLACQT V P
Sbjct: 76 PDNYRLACQTLVNGP 90
>gi|282897090|ref|ZP_06305092.1| Ferredoxin [Raphidiopsis brookii D9]
gi|281197742|gb|EFA72636.1| Ferredoxin [Raphidiopsis brookii D9]
Length = 98
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + ID+Y + + ++NC G G C TC+VEV EG E L SRTD EK K
Sbjct: 15 AADGANLRLKALENGIDIYKLWGK-MTNCGGYGQCATCIVEVTEGLENLSSRTDVEKRKF 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K P +RLACQT V P S
Sbjct: 74 KNSPHTYRLACQTLVNGPVSV 94
>gi|282900000|ref|ZP_06307960.1| Ferredoxin [Cylindrospermopsis raciborskii CS-505]
gi|281195098|gb|EFA70035.1| Ferredoxin [Cylindrospermopsis raciborskii CS-505]
Length = 98
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR L + ID+Y + + ++NC G G C TC+VEV EG E L SRTD EK K
Sbjct: 15 AADGANLRLKALENGIDIYKLWGK-MTNCGGYGQCATCIVEVTEGLENLSSRTDVEKRKF 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K P +RLACQT V P S
Sbjct: 74 KNSPDTYRLACQTLVNGPVSV 94
>gi|37522567|ref|NP_925944.1| ferredoxin [Gloeobacter violaceus PCC 7421]
gi|35213568|dbj|BAC90939.1| gsl2998 [Gloeobacter violaceus PCC 7421]
Length = 98
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD ML IDLY A+ L NC G G CGTC+V+++ G E RT E +KL++K
Sbjct: 18 GTILRDAMLEKRIDLYKGMAKVL-NCGGVGQCGTCIVDILSGIEHCSERTPVEDQKLRKK 76
Query: 150 PKNWRLACQTTV 161
P +RLACQT V
Sbjct: 77 PATYRLACQTLV 88
>gi|411119525|ref|ZP_11391905.1| ferredoxin [Oscillatoriales cyanobacterium JSC-12]
gi|410711388|gb|EKQ68895.1| ferredoxin [Oscillatoriales cyanobacterium JSC-12]
Length = 98
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L + ID+Y + + NC G G CGTC+VEV++G E L +T+ EK KLK+K
Sbjct: 18 GANLRFKALENGIDIYTLVGK-MMNCGGYGQCGTCVVEVVDGIENLSPKTEVEKRKLKKK 76
Query: 150 PKNWRLACQTTVGTPDS 166
P ++RLACQT V P S
Sbjct: 77 PDSYRLACQTLVNGPIS 93
>gi|434399372|ref|YP_007133376.1| ferredoxin [Stanieria cyanosphaera PCC 7437]
gi|428270469|gb|AFZ36410.1| ferredoxin [Stanieria cyanosphaera PCC 7437]
Length = 98
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ L + ID+Y + L NC G G CGTC+VE++EG E L +T E+ KL
Sbjct: 15 AANGANLREKALQNGIDIYTLRGK-LVNCGGYGQCGTCIVEIVEGMENLSPKTLFEERKL 73
Query: 147 KRKPKNWRLACQTTV 161
KRKP ++RLACQT V
Sbjct: 74 KRKPDSYRLACQTLV 88
>gi|209526248|ref|ZP_03274778.1| ferredoxin [Arthrospira maxima CS-328]
gi|376007915|ref|ZP_09785097.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|409994083|ref|ZP_11277204.1| ferredoxin [Arthrospira platensis str. Paraca]
gi|423062812|ref|ZP_17051602.1| ferredoxin [Arthrospira platensis C1]
gi|209493345|gb|EDZ93670.1| ferredoxin [Arthrospira maxima CS-328]
gi|291567887|dbj|BAI90159.1| probable 2Fe-2S ferredoxin [Arthrospira platensis NIES-39]
gi|375323708|emb|CCE20850.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|406715768|gb|EKD10921.1| ferredoxin [Arthrospira platensis C1]
gi|409935075|gb|EKN76618.1| ferredoxin [Arthrospira platensis str. Paraca]
Length = 99
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + IDLY + L NC G G CGTC+VEV+EG E L +T E+ L
Sbjct: 15 AADGANLRLKAMENQIDLYTLKGK-LLNCGGYGQCGTCIVEVVEGMENLSPKTPVEERML 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP +RLACQTTV P S
Sbjct: 74 KKKPDTYRLACQTTVNGPVSV 94
>gi|67925330|ref|ZP_00518686.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|67852829|gb|EAM48232.1| Ferredoxin [Crocosphaera watsonii WH 8501]
Length = 110
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + +D+Y + L NC G G CGTC+VE++EG + RTD E+ LK+K
Sbjct: 29 GANLREKALQNKVDIY-TFKGKLMNCGGYGQCGTCLVEIVEGMGNVSPRTDFEQRVLKKK 87
Query: 150 PKNWRLACQTTVGTP 164
P N RLACQT V P
Sbjct: 88 PDNHRLACQTLVNGP 102
>gi|414077281|ref|YP_006996599.1| ferredoxin [Anabaena sp. 90]
gi|413970697|gb|AFW94786.1| ferredoxin [Anabaena sp. 90]
Length = 98
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
A G LR + + ID+Y + + ++NC G G C TC+V++ EG E L RTD E +K
Sbjct: 14 VAADGANLRLKAVENGIDIYKFFGK-MTNCGGAGQCTTCVVQITEGLENLSPRTDLETKK 72
Query: 146 LKRKPKNWRLACQTTVGTP 164
K KP N+RLACQT V P
Sbjct: 73 FKNKPDNYRLACQTLVNGP 91
>gi|434386944|ref|YP_007097555.1| ferredoxin [Chamaesiphon minutus PCC 6605]
gi|428017934|gb|AFY94028.1| ferredoxin [Chamaesiphon minutus PCC 6605]
Length = 98
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ + + ID+Y + L NC G G CG C+VE+ EG E L RTD E KL +K
Sbjct: 18 GANLREKAVQNQIDIY-TFKGKLMNCGGYGQCGMCVVEIAEGMENLSPRTDFENRKLAKK 76
Query: 150 PKNWRLACQTTV 161
P N+RLACQT V
Sbjct: 77 PANYRLACQTLV 88
>gi|428771951|ref|YP_007163739.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
gi|428686230|gb|AFZ46090.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
Length = 98
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR+ + ID+Y + L NC G G CGTC+VE++EG + L +TD E KL
Sbjct: 15 AADGANLREKAKQNGIDIYRLRGK-LINCGGYGQCGTCLVEIVEGMDNLSPKTDFELRKL 73
Query: 147 KRKPKNWRLACQTTV 161
K+KP N+RLACQT V
Sbjct: 74 KKKPDNYRLACQTLV 88
>gi|87124895|ref|ZP_01080742.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
gi|86167215|gb|EAQ68475.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
Length = 155
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKEL--LGSRTDKEKEKLK 147
G+ LRD+ L I LYG + L NC G G C TC V+V EG L L RT E+ KL+
Sbjct: 18 GENLRDVALREGIALYGLKGQ-LGNCGGCGQCITCFVDVQEGGALGALSPRTAVEEAKLR 76
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPE 177
R+P++WRLACQT V G V+I P+
Sbjct: 77 RRPQSWRLACQTLV-----EGSVLIMTRPQ 101
>gi|220906296|ref|YP_002481607.1| ferredoxin [Cyanothece sp. PCC 7425]
gi|219862907|gb|ACL43246.1| ferredoxin [Cyanothece sp. PCC 7425]
Length = 98
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L + ID+Y + L NC G G CGTC+VEV++G E L RT+ E KLK K
Sbjct: 18 GANLRLKALEAGIDIYTLKGK-LFNCGGYGQCGTCIVEVVDGLEHLSDRTEVENRKLKNK 76
Query: 150 PKNWRLACQTTVGTP 164
P +RLACQT V P
Sbjct: 77 PPTYRLACQTLVEGP 91
>gi|42573135|ref|NP_974664.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
gi|332660684|gb|AEE86084.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
Length = 180
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 7/160 (4%)
Query: 15 SLPYNFNCTTNSHKSLKFYKRVSFSRSRI-----RATATISENDSQANAAEEPPVVNFAF 69
SL +N T ++ + + K R+R+ ++++ + Q +A P + F
Sbjct: 3 SLGFNLGFTFSNAQIQQHRKVSGGGRARVISCNSSSSSSSQASSPQGISAVTPLEIELEF 62
Query: 70 VHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV 128
DG+ + A G K LR IM ++ I+LY Y + + NC GGG+CGTC+VE+
Sbjct: 63 FGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYGKVM-NCGGGGSCGTCIVEI 121
Query: 129 IEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTG 168
++G++LL RTD E LK+KP++WRLACQT VG +++G
Sbjct: 122 LDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSG 161
>gi|16330969|ref|NP_441697.1| hydrogenase subunit [Synechocystis sp. PCC 6803]
gi|383322711|ref|YP_005383564.1| hydrogenase subunit [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325880|ref|YP_005386733.1| hydrogenase subunit [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491764|ref|YP_005409440.1| hydrogenase subunit [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437031|ref|YP_005651755.1| hydrogenase subunit [Synechocystis sp. PCC 6803]
gi|451815127|ref|YP_007451579.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|1653463|dbj|BAA18377.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|339274063|dbj|BAK50550.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|359272030|dbj|BAL29549.1| hydrogenase component [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275200|dbj|BAL32718.1| hydrogenase component [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278370|dbj|BAL35887.1| hydrogenase component [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961665|dbj|BAM54905.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|451781096|gb|AGF52065.1| hydrogenase component [Synechocystis sp. PCC 6803]
Length = 99
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ L + +D+Y + L NC G G CGTC+VE+ G E L +TD E L++K
Sbjct: 17 GANLREKALQNGVDIYTLKGK-LMNCGGYGQCGTCIVEITAGMENLSPKTDFENRVLRKK 75
Query: 150 PKNWRLACQTTVGTPDST 167
P N+RLACQT V P S
Sbjct: 76 PDNFRLACQTLVNGPVSV 93
>gi|116075864|ref|ZP_01473123.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
gi|116067179|gb|EAU72934.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
Length = 200
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 54/104 (51%), Gaps = 18/104 (17%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI--EGKELLGSRTDKEKEKLK 147
G+ LRD+ L I+LYG R L NC G G C TC VE+ G + L RT E KLK
Sbjct: 55 GENLRDVALREGIELYGLKGR-LGNCNGCGQCITCFVEISGGAGPDSLSPRTAVEDAKLK 113
Query: 148 RKPKNWRLACQTTV------------GTPDSTGLVV---IQQLP 176
R+P++WRLACQ V G PD G + Q+LP
Sbjct: 114 RRPEDWRLACQALVQRSAIVLTKPQTGLPDREGKIAAARAQELP 157
>gi|428224568|ref|YP_007108665.1| ferredoxin [Geitlerinema sp. PCC 7407]
gi|427984469|gb|AFY65613.1| ferredoxin [Geitlerinema sp. PCC 7407]
Length = 115
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L + ID+Y + + NC G G CGTC+VEV+EG E L RTD E KL++K
Sbjct: 32 GANLRIKALENGIDIYTLMGK-MMNCGGYGQCGTCIVEVLEGMENLSPRTDVEDRKLRKK 90
Query: 150 PKNWRLACQTTVGTP 164
++RLACQ V P
Sbjct: 91 ADSYRLACQALVNGP 105
>gi|352096611|ref|ZP_08957438.1| ferredoxin [Synechococcus sp. WH 8016]
gi|351676261|gb|EHA59415.1| ferredoxin [Synechococcus sp. WH 8016]
Length = 155
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 61/109 (55%), Gaps = 10/109 (9%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI--EGKELLGSRTDKEKEKLK 147
G+ LRD+ L NI+LYG + L NC G G C TC V+V+ + L +RT E KL+
Sbjct: 18 GENLRDVALRENIELYGLKGQ-LGNCGGCGQCITCFVDVVGSDADAPLTARTAVEDSKLR 76
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYKKIP--TSELP 194
R+P++WRLACQ V V++ P+ + + KK+ T+ LP
Sbjct: 77 RRPESWRLACQALVEQS-----VIVLTRPQVRLADLDKKKVAARTATLP 120
>gi|427702892|ref|YP_007046114.1| ferredoxin [Cyanobium gracile PCC 6307]
gi|427346060|gb|AFY28773.1| ferredoxin [Cyanobium gracile PCC 6307]
Length = 156
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG--KELLGSRTDKEKEKLK 147
G+ LR++ L I+LYG R L NC G G C TC VEV+EG L +T E+ KL+
Sbjct: 18 GENLREVALREGIELYGLKGR-LGNCGGCGQCITCFVEVVEGGTATALTEQTAVEQLKLR 76
Query: 148 RKPKNWRLACQTTV 161
R+P++WRLACQ V
Sbjct: 77 RRPQSWRLACQALV 90
>gi|428300319|ref|YP_007138625.1| ferredoxin [Calothrix sp. PCC 6303]
gi|428236863|gb|AFZ02653.1| ferredoxin [Calothrix sp. PCC 6303]
Length = 98
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + ID+Y + + + NC G G CG C V+VI+G E L RTD E + L
Sbjct: 15 AADGANLRLKAMENGIDIYKTWGK-MMNCGGYGQCGHCAVQVIDGMENLSPRTDAENKLL 73
Query: 147 KRKPKNWRLACQTTVGTPDSTGLVVIQQLP 176
K+KP N+RLACQ+ V G V I P
Sbjct: 74 KKKPDNFRLACQSIV-----NGAVTIATKP 98
>gi|113955411|ref|YP_729761.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9311]
gi|113882762|gb|ABI47720.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9311]
Length = 197
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI--EGKELLGSRTDKEKEKLK 147
G+ LRD+ L NI+LYG + L NC G G C TC V+V+ + L +RT E KL+
Sbjct: 60 GENLRDVALRENIELYGLKGQ-LGNCGGCGQCITCFVDVVGSDADAPLTARTVVEDNKLR 118
Query: 148 RKPKNWRLACQTTV 161
R+P++WRLACQ V
Sbjct: 119 RRPESWRLACQALV 132
>gi|443315840|ref|ZP_21045311.1| ferredoxin [Leptolyngbya sp. PCC 6406]
gi|442784565|gb|ELR94434.1| ferredoxin [Leptolyngbya sp. PCC 6406]
Length = 101
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + IDLY + ++NC G G CGTC+VE+ EG E L RT E+ KL
Sbjct: 15 AADGANLRFKAMEQGIDLY-TFVGKMTNCGGYGQCGTCVVEIAEGMENLSPRTAVEERKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
+++P+ RLACQ V P S
Sbjct: 74 RKRPEACRLACQVVVNGPVSV 94
>gi|33866513|ref|NP_898072.1| ferredoxin [Synechococcus sp. WH 8102]
gi|33633291|emb|CAE08496.1| possible ferredoxin [2Fe-2S] [Synechococcus sp. WH 8102]
Length = 153
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKLK 147
G+ LR++ L I+LYG + L NC G G C TC V V++ GK+ L +RT E KL+
Sbjct: 18 GENLREVALREGIELYGLKGQ-LGNCGGCGQCITCFVSVVDEGGKKALTARTPVEDNKLR 76
Query: 148 RKPKNWRLACQTTVGT 163
R+P WRLACQ V T
Sbjct: 77 RRPAEWRLACQALVET 92
>gi|299472521|emb|CBN77306.1| Ferredoxin [Ectocarpus siliculosus]
Length = 337
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 13/117 (11%)
Query: 75 LPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGP----YARPLS--NCAGGGTCGTCMVEV 128
LP G+ D + G LR M+ ++ +Y P + +P + NCAG GTCGTC VEV
Sbjct: 221 LPSGSRDHEIKA---GSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEV 277
Query: 129 IEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLVVIQQLP--EWKGH 181
+G +LL S +E L R P WRL+C+ VG + G V ++ +P EW+
Sbjct: 278 QQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQ 334
>gi|443311688|ref|ZP_21041313.1| ferredoxin [Synechocystis sp. PCC 7509]
gi|442778261|gb|ELR88529.1| ferredoxin [Synechocystis sp. PCC 7509]
Length = 99
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G LR + + ID+Y + + NC G G CGTC+V++ EG E L +TD E KL
Sbjct: 15 AADGANLRIKAIENGIDIYTLRGK-MMNCGGYGQCGTCIVDIAEGLENLSPKTDFENRKL 73
Query: 147 KRKPKNWRLACQTTVGTPDST 167
K+KP +RLACQ V P S
Sbjct: 74 KKKPSTYRLACQALVNGPVSV 94
>gi|427418499|ref|ZP_18908682.1| ferredoxin [Leptolyngbya sp. PCC 7375]
gi|425761212|gb|EKV02065.1| ferredoxin [Leptolyngbya sp. PCC 7375]
Length = 102
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
TA G LR +++ +D+Y + + NC G G CG C+VE+ EG + L RT E+++
Sbjct: 14 TAADGANLRQKAIDNRVDVY-TFTGKMMNCGGYGQCGLCVVEITEGLDNLSPRTAVEEKR 72
Query: 146 LKRKPKNWRLACQTTVGTPDST 167
LK++P N RLACQT V P S
Sbjct: 73 LKKRPGNCRLACQTLVNGPISV 94
>gi|124023904|ref|YP_001018211.1| ferredoxin [Prochlorococcus marinus str. MIT 9303]
gi|123964190|gb|ABM78946.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9303]
Length = 125
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGS---RTDKEKEKL 146
G+ LR++ L ++LYG + L NC G G C TC V IEG+ +G+ RT+ E+ KL
Sbjct: 23 GENLREVALREGMELYGLKGK-LGNCGGCGQCITCFVG-IEGESKVGALSPRTEVEEIKL 80
Query: 147 KRKPKNWRLACQTTV 161
KR+P+NWRLACQT V
Sbjct: 81 KRRPENWRLACQTIV 95
>gi|33863931|ref|NP_895491.1| ferredoxin [Prochlorococcus marinus str. MIT 9313]
gi|33635515|emb|CAE21839.1| Ferredoxin [Prochlorococcus marinus str. MIT 9313]
Length = 129
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGS---RTDKEKEKL 146
G+ LR++ L ++LYG + L NC G G C TC V IEG+ +G+ RT+ E+ KL
Sbjct: 27 GENLREVALREGMELYGLKGK-LGNCGGCGQCITCFVG-IEGESKVGALSPRTEVEEIKL 84
Query: 147 KRKPKNWRLACQTTV 161
KR+P+NWRLACQT V
Sbjct: 85 KRRPENWRLACQTIV 99
>gi|91069913|gb|ABE10842.1| putative ferredoxin [uncultured Prochlorococcus marinus clone
ASNC2150]
Length = 120
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ N+ LYG L NC G G C TC + V G K+ L T E+EKLK
Sbjct: 18 GENLRELVMKENLQLYG-LKGILGNCGGAGQCSTCFISVEGGNKDSLSPLTSVEEEKLKN 76
Query: 149 KPKNWRLACQTTV 161
+P+NWRLACQT +
Sbjct: 77 RPENWRLACQTLI 89
>gi|126695679|ref|YP_001090565.1| ferredoxin [Prochlorococcus marinus str. MIT 9301]
gi|126542722|gb|ABO16964.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9301]
Length = 120
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ N+ LYG L NC G G C TC + V G K L T E+EKLK
Sbjct: 18 GENLRELVMRENLQLYG-LKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKN 76
Query: 149 KPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKY----KKIP 189
+P+NWRLACQT + + ST ++ Q P E K KK+P
Sbjct: 77 RPENWRLACQTLIKS--STVILTKPQSPPSNLEELKKISENKKLP 119
>gi|254430766|ref|ZP_05044469.1| ferredoxin [Cyanobium sp. PCC 7001]
gi|197625219|gb|EDY37778.1| ferredoxin [Cyanobium sp. PCC 7001]
Length = 174
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGK--ELLGSRTDKEKEKLK 147
G+ LR++ L + LYG L NC G G C TC VE+ EG + L RT E +KLK
Sbjct: 18 GENLREVALREGVQLYG-LKGTLGNCGGCGQCITCFVEIPEGTPGQALSGRTPVEDQKLK 76
Query: 148 RKPKNWRLACQTTV 161
R+P +WRLACQ V
Sbjct: 77 RRPGHWRLACQALV 90
>gi|219124243|ref|XP_002182418.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406379|gb|EEC46319.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 312
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 73 VLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLS------NCAGGGTCGTCMV 126
V + DG+ + A G+ LR + + + LY R NC G G CGTC+V
Sbjct: 186 VEIDDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLV 245
Query: 127 EVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPE 177
V++G +LL + E K +P +WR +C+TTVG + G + I P+
Sbjct: 246 NVLQGMDLLNPKDSHEVFITKGRPPSWRASCRTTVGFNNVGGTLRISLHPQ 296
>gi|91070578|gb|ABE11481.1| putative ferredoxin [uncultured Prochlorococcus marinus clone
HOT0M-7C8]
Length = 120
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKEL--LGSRTDKEKEKLK 147
G+ LR++++ N+ LYG + L NC G G C TC + V EG + L T E+EKLK
Sbjct: 18 GENLRELVMRENLQLYGLKGK-LGNCGGAGQCSTCFISV-EGGNINSLSPLTSVEEEKLK 75
Query: 148 RKPKNWRLACQTTV 161
+P+NWRLACQT +
Sbjct: 76 NRPENWRLACQTLI 89
>gi|123967877|ref|YP_001008735.1| ferredoxin [Prochlorococcus marinus str. AS9601]
gi|123197987|gb|ABM69628.1| possible ferredoxin [Prochlorococcus marinus str. AS9601]
Length = 120
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ N+ LYG L NC G G C TC + V G K L T E+EKLK
Sbjct: 18 GENLRELVMKENLQLYG-LKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKN 76
Query: 149 KPKNWRLACQTTV 161
+P+NWRLACQT +
Sbjct: 77 RPENWRLACQTLI 89
>gi|91070125|gb|ABE11049.1| putative ferredoxin [uncultured Prochlorococcus marinus clone
ASNC729]
Length = 120
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ N+ LYG L NC G G C TC + V G K L T E+EKLK
Sbjct: 18 GENLRELVMKENLQLYG-LKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKN 76
Query: 149 KPKNWRLACQTTV 161
+P+NWRLACQT +
Sbjct: 77 RPENWRLACQTLI 89
>gi|255087989|ref|XP_002505917.1| predicted protein [Micromonas sp. RCC299]
gi|226521188|gb|ACO67175.1| predicted protein [Micromonas sp. RCC299]
Length = 151
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKP 150
LR ++L++ LYG R L NC G G CGTC+V+V+EG +LL +T+ E K+K +
Sbjct: 63 LRTVILDTGAQLYGGMDR-LMNCGGMGNCGTCLVDVVEGADLLSEQTEAELRKVKAGKLK 121
Query: 151 KNWRLACQTTVG---TPDSTGLVVI 172
+ WR++CQ VG P+ L V+
Sbjct: 122 EGWRMSCQCLVGGDAAPEGAELSVV 146
>gi|78778707|ref|YP_396819.1| ferredoxin-like [Prochlorococcus marinus str. MIT 9312]
gi|78712206|gb|ABB49383.1| ferredoxin-like protein [Prochlorococcus marinus str. MIT 9312]
Length = 120
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ N+ LYG L NC G G C TC + V G K L T E+EKLK
Sbjct: 18 GENLRELVIKENLQLYG-LKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKN 76
Query: 149 KPKNWRLACQTTV 161
+P+NWRLACQT +
Sbjct: 77 RPENWRLACQTLI 89
>gi|33239808|ref|NP_874750.1| ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237334|gb|AAP99402.1| Ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 130
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE-LLGSRTDKEKEKLKR 148
G+ LR++ L ++LYG + L NC G G C TC V V EG++ L TD E+ KL+
Sbjct: 28 GENLREVALREGLELYG-FKGKLGNCGGYGQCITCYVSVAEGQQDSLSPITDIEQTKLRG 86
Query: 149 KPKNWRLACQTTVGT 163
+P NWRLACQ V T
Sbjct: 87 RPGNWRLACQAVVKT 101
>gi|116072658|ref|ZP_01469924.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
gi|116064545|gb|EAU70305.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
Length = 158
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKLK 147
G+ LR++ L +++LYG + L NC G G C TC V V++ + L +RT E KL+
Sbjct: 18 GENLREVALRQSLELYGLKGQ-LGNCGGCGQCSTCFVSVVDENNADALTARTPVEDSKLR 76
Query: 148 RKPKNWRLACQTTV 161
R+P+ WRLACQ V
Sbjct: 77 RRPQEWRLACQALV 90
>gi|317968714|ref|ZP_07970104.1| ferredoxin (2Fe-2S) [Synechococcus sp. CB0205]
Length = 152
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGS---RTDKEKEKL 146
G+ LR++ L ++LYG + L NC G G C TC V+V+ G+ GS RT E++KL
Sbjct: 18 GENLREVALREGLELYGLKGQ-LGNCGGCGQCITCFVDVV-GESSPGSLSGRTAVEEQKL 75
Query: 147 KRKPKNWRLACQTTV 161
+R+P+ WRLACQT V
Sbjct: 76 RRRPQTWRLACQTLV 90
>gi|148241518|ref|YP_001226675.1| ferredoxin [Synechococcus sp. RCC307]
gi|147849828|emb|CAK27322.1| Ferredoxin [Synechococcus sp. RCC307]
Length = 146
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 16/102 (15%)
Query: 63 PVVNFAFV-HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTC 121
PVV F VL P GT LR++ L ++LYG R L NC G G C
Sbjct: 2 PVVRFVREGREVLCPPGT------------NLRELALQEGVELYGLKGR-LGNCGGCGQC 48
Query: 122 GTCMVEVI-EGKE-LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
TC VEV+ E KE L T E++KL+R+P++WRLACQ V
Sbjct: 49 ITCFVEVVAERKEGALTPLTPVEQQKLRRRPESWRLACQALV 90
>gi|428220662|ref|YP_007104832.1| ferredoxin [Synechococcus sp. PCC 7502]
gi|427994002|gb|AFY72697.1| ferredoxin [Synechococcus sp. PCC 7502]
Length = 91
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 35/50 (70%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
L+NC G G CGTC+VE+ +G E L RTD E K KRKP N+RLACQ V
Sbjct: 21 LTNCGGYGQCGTCVVEITKGIENLSPRTDFETFKFKRKPDNYRLACQVVV 70
>gi|157412678|ref|YP_001483544.1| ferredoxin [Prochlorococcus marinus str. MIT 9215]
gi|157387253|gb|ABV49958.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9215]
Length = 120
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 10/106 (9%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ + LYG L NC G G C TC V + G K L T E+EKLK
Sbjct: 18 GENLRELIIREKLQLYGLKGL-LGNCNGAGQCSTCFVSIEGGNKNSLSPLTFVEEEKLKN 76
Query: 149 KPKNWRLACQTTVGTPDSTGLVVIQ-QLPEWKGHEWK----YKKIP 189
+P+NWRLACQT + S+ L++ + Q P E K YKK+P
Sbjct: 77 RPENWRLACQTLI---RSSALILTKPQSPPSNLDELKQISEYKKLP 119
>gi|318042633|ref|ZP_07974589.1| ferredoxin (2Fe-2S) [Synechococcus sp. CB0101]
Length = 213
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGS---RTDKEKEKL 146
G+ LR++ L I LYG + L NC G G C TC V+V+ G+ GS RT E +KL
Sbjct: 75 GENLREVALREGIALYGLKGQ-LGNCGGCGQCITCFVDVV-GESSPGSLSGRTAVEDQKL 132
Query: 147 KRKPKNWRLACQTTV 161
+R+P+ WRLACQT V
Sbjct: 133 RRRPQTWRLACQTLV 147
>gi|317969635|ref|ZP_07971025.1| ferredoxin [Synechococcus sp. CB0205]
Length = 154
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR +++ ++ YG L+NC G G CGTC+VEV+EG + L R+D E+ L +
Sbjct: 53 GANLRKAAVDAGVNPYGGLNN-LNNCGGVGQCGTCVVEVVEGMQNLSPRSDVEQVYLADR 111
Query: 150 PKNWRLACQTTV 161
P N+RL+C+T+V
Sbjct: 112 PANYRLSCRTSV 123
>gi|116072893|ref|ZP_01470158.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
gi|116064419|gb|EAU70180.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
Length = 119
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y L+NC+G G CGTC++EV+EG+E L R+D E+ L +
Sbjct: 18 GANLRRASLDAGINPYKSLNN-LNNCSGVGQCGTCVMEVVEGQENLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTV 161
P N+RL+C+TTV
Sbjct: 77 PANFRLSCRTTV 88
>gi|78185429|ref|YP_377864.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
gi|78169723|gb|ABB26820.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
Length = 163
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKLK 147
G+ LR++ L ++LYG + L NC G G C TC V V++ + L RT E KL+
Sbjct: 23 GENLREVALRERLELYGLKGQ-LGNCGGCGQCSTCFVSVVDENNADALTVRTPVEDSKLR 81
Query: 148 RKPKNWRLACQTTV 161
R+P+ WRLACQ V
Sbjct: 82 RRPQEWRLACQALV 95
>gi|148238961|ref|YP_001224348.1| ferredoxin [Synechococcus sp. WH 7803]
gi|147847500|emb|CAK23051.1| Ferredoxin [Synechococcus sp. WH 7803]
Length = 119
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L+S I+ Y L+NC G G CGTC+VEV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAALDSGINPY-KGLNNLNNCGGVGQCGTCVVEVLEGSQNLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPE 177
P N+RL+C+T+V G V I+ P+
Sbjct: 77 PANYRLSCRTSV-----NGDVTIRTRPD 99
>gi|113955075|ref|YP_731220.1| (Fe-S)-binding protein [Synechococcus sp. CC9311]
gi|113882426|gb|ABI47384.1| iron-sulfur cluster-binding protein [Synechococcus sp. CC9311]
Length = 119
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L+S ++ Y + L+NC G G CGTC++EV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAALSSGVNPYKGFNN-LNNCGGVGQCGTCVIEVLEGAQNLSPRSDVEEVYLSDR 76
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPE 177
P N+RL+C+T+V G V ++ P+
Sbjct: 77 PANYRLSCRTSV-----NGDVTVRTRPD 99
>gi|78185229|ref|YP_377664.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
gi|78169523|gb|ABB26620.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
Length = 128
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y L+NC+G G CGTC++EV+EG++ L R+D E+ L +
Sbjct: 27 GANLRRASLDAGINPYKSLNN-LNNCSGVGQCGTCVMEVVEGQDNLSPRSDVEEVYLADR 85
Query: 150 PKNWRLACQTTV 161
P N+RL+C+TTV
Sbjct: 86 PANFRLSCRTTV 97
>gi|148238855|ref|YP_001224242.1| ferredoxin [Synechococcus sp. WH 7803]
gi|147847394|emb|CAK22945.1| Ferredoxin [Synechococcus sp. WH 7803]
Length = 161
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKEL----LGSRTDKEKEK 145
G+ LRD+ L I LYG + L NC G G C TC VEV +G + L RT E+ K
Sbjct: 18 GENLRDVALREGIQLYGLKGQ-LGNCGGCGQCITCFVEV-KGDQTAAASLTGRTAVEEAK 75
Query: 146 LKRKPKNWRLACQTTV 161
L+R+P +WRLACQ V
Sbjct: 76 LRRRPDSWRLACQALV 91
>gi|422293297|gb|EKU20597.1| hypothetical protein NGA_0602310 [Nannochloropsis gaditana CCMP526]
Length = 330
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Query: 90 GQKLRDIMLNSNIDLYG--------PYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDK 141
G +LR +L + + +Y PY NC G G CGTC+V+V+EGKELL + D+
Sbjct: 228 GSQLRKELLRAGLPVYSQDTLRFDQPYVT--GNCGGEGICGTCLVQVLEGKELLNEK-DE 284
Query: 142 EKEKLKRK--PKNWRLACQTTVGTPDSTGLVVIQQLPE 177
+ + RK NWRL+C+ VG ++ G V + +P+
Sbjct: 285 VEAMVTRKWGAANWRLSCRVIVGATNTPGTVRFKLMPQ 322
>gi|88807800|ref|ZP_01123311.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
gi|88787839|gb|EAR18995.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
Length = 162
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKEL----LGSRTDKEKEK 145
G+ LRD+ L I LYG + L NC G G C TC VEV +G + L RT E K
Sbjct: 18 GENLRDVALREGIQLYGLKGQ-LGNCGGCGQCITCFVEV-KGDQAAANSLSGRTAVEDSK 75
Query: 146 LKRKPKNWRLACQTTV 161
L+R+P +WRLACQ V
Sbjct: 76 LRRRPGSWRLACQALV 91
>gi|33866300|ref|NP_897859.1| ferredoxin [Synechococcus sp. WH 8102]
gi|33639275|emb|CAE08283.1| possible ferredoxin [2Fe-2S] [Synechococcus sp. WH 8102]
Length = 119
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y L+NC+G G CGTC++EV+EG+ L R+D E+ L +
Sbjct: 18 GANLRKAALDAGINPYNG-VNNLNNCSGVGQCGTCVMEVVEGQANLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTV 161
P N+RL+C+TTV
Sbjct: 77 PANFRLSCRTTV 88
>gi|87302629|ref|ZP_01085446.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
gi|87282973|gb|EAQ74930.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
Length = 120
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y L+NC G G CGTC+VEV+EG + L R+D E+ L +
Sbjct: 18 GANLRQAALDAGINPYKGLNN-LNNCGGLGQCGTCVVEVLEGAQNLSPRSDVEQVYLSDR 76
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPE 177
P N+RL+C+T+V G V I+ P+
Sbjct: 77 PANYRLSCRTSV-----NGDVTIRTRPD 99
>gi|78212021|ref|YP_380800.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
gi|78196480|gb|ABB34245.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
Length = 158
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKLK 147
G+ LR++ I+LYG + L NC G G C TC V V++ + L +RT E KL+
Sbjct: 18 GENLREVARREGIELYGLKGQ-LGNCGGCGQCITCFVSVVDEDNADALTARTAVEDSKLR 76
Query: 148 RKPKNWRLACQTTV 161
R+P+ WRLACQ V
Sbjct: 77 RRPQEWRLACQALV 90
>gi|260434661|ref|ZP_05788631.1| ferredoxin [Synechococcus sp. WH 8109]
gi|260412535|gb|EEX05831.1| ferredoxin [Synechococcus sp. WH 8109]
Length = 146
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKLK 147
G+ LR++ I+LYG + L NC G G C TC V V++ + L +RT E KL+
Sbjct: 6 GENLREVARREGIELYGLKGQ-LGNCGGCGQCITCFVSVVDEDNADALTARTAVEDSKLR 64
Query: 148 RKPKNWRLACQTTV 161
R+P+ WRLACQ V
Sbjct: 65 RRPQEWRLACQALV 78
>gi|352094742|ref|ZP_08955913.1| ferredoxin [Synechococcus sp. WH 8016]
gi|351681082|gb|EHA64214.1| ferredoxin [Synechococcus sp. WH 8016]
Length = 119
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L+S I+ Y L+NC G G CGTC++EV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAALSSGINPY-KGLNNLNNCGGVGQCGTCVIEVLEGAQNLSPRSDVEEVYLSDR 76
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPE 177
P N+RL+C+T+V G V I+ P+
Sbjct: 77 PANYRLSCRTSV-----NGDVTIRTRPD 99
>gi|254525580|ref|ZP_05137632.1| ferredoxin [Prochlorococcus marinus str. MIT 9202]
gi|221537004|gb|EEE39457.1| ferredoxin [Prochlorococcus marinus str. MIT 9202]
Length = 120
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LRD+++ + LYG L NC G G C TC + G K L T E+EKLK
Sbjct: 18 GENLRDLIIREKLQLYGLKGL-LGNCNGAGQCSTCFISFEGGNKNSLSPLTFVEEEKLKN 76
Query: 149 KPKNWRLACQTTV 161
+P+NWRLACQT +
Sbjct: 77 RPQNWRLACQTLI 89
>gi|88807672|ref|ZP_01123184.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
gi|88788886|gb|EAR20041.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
Length = 119
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L S I+ Y L+NC G G CGTC+VEV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAALASGINPY-KGLNNLNNCGGVGQCGTCVVEVLEGSQNLSPRSDVEEVYLSDR 76
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLPE 177
P N+RL+C+T+V G V I+ P+
Sbjct: 77 PANYRLSCRTSV-----NGDVTIRTRPD 99
>gi|116075304|ref|ZP_01472564.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
gi|116067501|gb|EAU73255.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
Length = 119
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y L+NC G G CGTC+VEV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAALSAGINPY-KGLNNLNNCGGVGQCGTCVVEVVEGAQNLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTV 161
P N+RL+C+T+V
Sbjct: 77 PANYRLSCRTSV 88
>gi|78212246|ref|YP_381025.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
gi|78196705|gb|ABB34470.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
Length = 132
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ ++ Y L+NC+G G CGTC++EV+EG+ L R+D E+ L +
Sbjct: 31 GANLRKAALDAGVNPYKSLNN-LNNCSGVGQCGTCVMEVLEGQANLSPRSDVEEVYLADR 89
Query: 150 PKNWRLACQTTV 161
P N+RL+C+TTV
Sbjct: 90 PANFRLSCRTTV 101
>gi|194477092|ref|YP_002049271.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
gi|171192099|gb|ACB43061.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
Length = 159
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE-----GKELLGSRTDKEKE 144
G+ LR++ L I+LYG + L NC G G C TC V++I L +RT E
Sbjct: 18 GENLREVALRHGIELYGIKGK-LGNCGGCGQCITCFVDIISPHGSNSPSTLSARTQVENM 76
Query: 145 KLKRKPKNWRLACQTTV 161
KL+R+P WRL CQ V
Sbjct: 77 KLRRRPDTWRLGCQVLV 93
>gi|318041150|ref|ZP_07973106.1| ferredoxin [Synechococcus sp. CB0101]
Length = 119
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR +++ I+ Y L+NC G G CGTC+VEV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAAIDAGINPY-KGLNNLNNCGGVGQCGTCVVEVVEGMQNLSPRSDVEQVYLADR 76
Query: 150 PKNWRLACQTTV 161
P N+RL+C+T+V
Sbjct: 77 PANYRLSCRTSV 88
>gi|254422452|ref|ZP_05036170.1| 2Fe-2S iron-sulfur cluster binding domain protein [Synechococcus
sp. PCC 7335]
gi|196189941|gb|EDX84905.1| 2Fe-2S iron-sulfur cluster binding domain protein [Synechococcus
sp. PCC 7335]
Length = 139
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR + ID+Y + L+ C G G CGTC+V+VIEG L R E+ LK++
Sbjct: 18 GSNLRFKAQENGIDIY-TFMGKLAQCGGYGQCGTCVVDVIEGGHNLSPRNAVEERMLKKR 76
Query: 150 PKNWRLACQTTVGTPDST 167
P RLACQT V P S
Sbjct: 77 PSTCRLACQTVVNGPISV 94
>gi|87123893|ref|ZP_01079743.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
gi|86168462|gb|EAQ69719.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
Length = 119
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y L+NC G G CGTC+VEV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAALDAGINPY-KGLNNLNNCGGVGQCGTCVVEVLEGAQNLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTV 161
P N+RL+C+T+V
Sbjct: 77 PANYRLSCRTSV 88
>gi|194477324|ref|YP_002049503.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
gi|171192331|gb|ACB43293.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
Length = 120
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y L+NC G G CGTC+VEVIEG L R+D E+ L +
Sbjct: 18 GANLRKAALDAGINPYKGLNN-LNNCGGVGQCGTCVVEVIEGVRNLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTV 161
P N+RL+C+T+V
Sbjct: 77 PANYRLSCRTSV 88
>gi|260435553|ref|ZP_05789523.1| ferredoxin [Synechococcus sp. WH 8109]
gi|260413427|gb|EEX06723.1| ferredoxin [Synechococcus sp. WH 8109]
Length = 132
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ ++ Y L+NC+G G CGTC++EV+EG+ L R+D E+ L +
Sbjct: 31 GANLRKAALDAGVNPYKSLNN-LNNCSGVGQCGTCVMEVLEGQANLSPRSDVEEVYLADR 89
Query: 150 PKNWRLACQTTV 161
P N+RL+C+TTV
Sbjct: 90 PANFRLSCRTTV 101
>gi|123965583|ref|YP_001010664.1| ferredoxin [Prochlorococcus marinus str. MIT 9515]
gi|123199949|gb|ABM71557.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9515]
Length = 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ + LYG L NC G G C TC + + G K L T E+EKLK
Sbjct: 18 GENLRELVIKEKLQLYGLKGL-LGNCGGVGQCSTCFISLEGGTKNSLSPITAVEQEKLKN 76
Query: 149 KPKNWRLACQTTVGT 163
+P+NWRLACQT + +
Sbjct: 77 RPENWRLACQTLISS 91
>gi|33860874|ref|NP_892435.1| ferredoxin [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633816|emb|CAE18775.1| possible ferredoxin [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 120
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++++ + LYG L NC G G C TC V V G K L T E+EKL
Sbjct: 18 GENLRELVIREKLQLYG-LKGILGNCGGVGQCSTCFVSVEGGAKNSLSPLTSVEEEKLNN 76
Query: 149 KPKNWRLACQTTVGT 163
+P NWRLACQT + +
Sbjct: 77 RPDNWRLACQTLINS 91
>gi|87300979|ref|ZP_01083821.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
gi|87284850|gb|EAQ76802.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
Length = 157
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE--LLGSRTDKEKEKLK 147
G+ LR++ L ++LYG + L NC G G C TC V+V+ L RT E KL+
Sbjct: 18 GENLREVALREGLELYGLKGQ-LGNCGGCGQCITCFVDVVAEASPGALTPRTAVEDRKLR 76
Query: 148 RKPKNWRLACQTTV 161
R+P WRLACQ V
Sbjct: 77 RRPDGWRLACQALV 90
>gi|219113233|ref|XP_002186200.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583050|gb|ACI65670.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 259
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 49 ISENDSQANAAEEPPVVNFAFVHSV---LLPDGTPDIHFRTACGGQKLRDIMLNSNIDLY 105
+S N+ + AEE F SV LL +G D+ T G LR ++L++++++Y
Sbjct: 136 VSMNEIDSVDAEEDSAPAFEIGTSVTIKLLQEGKDDLDIETKVG-DNLRQVLLDNSVEVY 194
Query: 106 GPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTP 164
+ L NC GGG C C + ++ E R+D E +KLK+ P + RL C + P
Sbjct: 195 QGMKQKLGNCGGGGQCTFCAFDFVD-SEGWAERSDYESQKLKKNP-DARLTCLNNIQGP 251
>gi|427701407|ref|YP_007044629.1| ferredoxin [Cyanobium gracile PCC 6307]
gi|427344575|gb|AFY27288.1| ferredoxin [Cyanobium gracile PCC 6307]
Length = 120
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
Query: 90 GQKLRDIMLNSNIDLYGPYA--RPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK 147
G LR L++ ++ PY L+NC G G CGTC+VEV+EG L R+D E+ L
Sbjct: 18 GANLRKAALDAGVN---PYTGLNNLNNCGGLGQCGTCVVEVVEGARNLSPRSDVEEVYLA 74
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPE 177
+P ++RL+C+TTV G V I+ P+
Sbjct: 75 DRPASYRLSCRTTV-----NGDVTIRTRPD 99
>gi|298707649|emb|CBJ25966.1| possible ferredoxin (2Fe-2S) [Ectocarpus siliculosus]
Length = 333
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 58 AAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAG 117
AE PP A + + DG P++ TA G LRD + + I++Y R +NC G
Sbjct: 217 GAEAPP----AEITVTVKQDGKPELAL-TAPSGANLRDFLTENGINVYQSVTR-WTNCKG 270
Query: 118 GGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
CGTC+V + EG E R+ E L+ P N+RL+C T +
Sbjct: 271 KQLCGTCIVAIDEGLESTTIRSVDESSTLRDNPPNYRLSCVTNM 314
>gi|148241970|ref|YP_001227127.1| ferredoxin [Synechococcus sp. RCC307]
gi|147850280|emb|CAK27774.1| Ferredoxin [Synechococcus sp. RCC307]
Length = 122
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ ++ Y L+NC G G CGTC++EV+EG E L R+D E+ L +
Sbjct: 18 GANLRKAALDAGVNPYQGLNN-LNNCGGVGQCGTCVMEVVEGMENLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTV 161
P +RL+C+T+V
Sbjct: 77 PATYRLSCRTSV 88
>gi|159474836|ref|XP_001695531.1| 2Fe-2S ferredoxin [Chlamydomonas reinhardtii]
gi|158276014|gb|EDP01789.1| 2Fe-2S ferredoxin [Chlamydomonas reinhardtii]
Length = 117
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G KLRD+++ + ++LY + + S GG CGTC+V+V G ++L RT EK+KL K
Sbjct: 32 GDKLRDVLMANKVELYTTWGKVWSCGG-GGQCGTCIVDVKSGADILTERTGAEKKKLSGK 90
Query: 150 PKNWRLACQTTVGTPDSTGLVVIQQLP 176
P+++RLACQT VG +++G V I P
Sbjct: 91 PESFRLACQTLVGDGENSGAVTIATKP 117
>gi|299470431|emb|CBN80192.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 260
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR +L +++Y + ++NC GGG CGTC+V+V+E E R++ E KLK +
Sbjct: 178 GDNLRKTLLAGKVEVYDMVGK-MTNCNGGGQCGTCVVQVVE-AEGWDPRSEWEAGKLKGR 235
Query: 150 PKNWRLACQTTV 161
P++ RL+CQT +
Sbjct: 236 PESQRLSCQTVI 247
>gi|254431333|ref|ZP_05045036.1| iron-sulfur cluster-binding protein [Cyanobium sp. PCC 7001]
gi|197625786|gb|EDY38345.1| iron-sulfur cluster-binding protein [Cyanobium sp. PCC 7001]
Length = 119
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR L++ I+ Y + ++NC G G CGTC++EV+EG + L R+D E+ L +
Sbjct: 18 GANLRKAALDAGINPYKGF-NNVNNCGGLGQCGTCVMEVLEGMQNLSPRSDVEEVYLADR 76
Query: 150 PKNWRLACQTTV 161
P ++RL+C+T+V
Sbjct: 77 PASYRLSCRTSV 88
>gi|159902892|ref|YP_001550236.1| ferredoxin [Prochlorococcus marinus str. MIT 9211]
gi|159888068|gb|ABX08282.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9211]
Length = 120
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKR 148
G+ LR++ L + LYG L NC G G C TC V V G K+ L T+ E KL
Sbjct: 18 GENLREVALKEGLQLYG-LKGVLGNCGGCGQCITCFVSVEGGGKDSLSPLTEVENAKLSN 76
Query: 149 KPKNWRLACQTTV 161
+PKNWRL+CQ V
Sbjct: 77 RPKNWRLSCQCLV 89
>gi|308804377|ref|XP_003079501.1| ferredoxin-related (ISS) [Ostreococcus tauri]
gi|116057956|emb|CAL54159.1| ferredoxin-related (ISS) [Ostreococcus tauri]
Length = 291
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 68 AFVHSVLLP-DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMV 126
A V LP DG+ I R + LR L + LY + + NC G G C TC V
Sbjct: 4 ASVKVTFLPSDGSSAIE-REITANEVLRTCALEAKAPLYSGW-DSMMNCGGLGNCATCAV 61
Query: 127 EVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQTTV 161
+V G ELL TD EK K K + WRLACQ V
Sbjct: 62 DVKRGGELLSEETDAEKRKRKAGKLQDTWRLACQCVV 98
>gi|224010703|ref|XP_002294309.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970326|gb|EED88664.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 334
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLS-----NCAGGGTCGTCMVEVIEGKEL 134
PD + G+ LR ML I L + +C GTC TC+V V +G EL
Sbjct: 230 PDTYIE-LFAGENLRRAMLTRGIKLNDKLSERFDSGGTGDCGADGTCATCVVSVTKGGEL 288
Query: 135 LGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLP-EWK 179
L E + L +KP+ WR+AC+T VG G + IQ P +W+
Sbjct: 289 LSPMKMTESQILSKKPR-WRMACKTVVGYGMMEGDLTIQVNPRQWE 333
>gi|397576439|gb|EJK50260.1| hypothetical protein THAOC_30796, partial [Thalassiosira oceanica]
Length = 267
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 61 EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120
EP ++ V + D T + A G +R ++++ I++Y R +NC G
Sbjct: 151 EPEIITITVVQNKGAKDET--TRYIQAMAGANVRQTLVDNGINVYQSVTR-WTNCKGKQL 207
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180
CGTC+V V EG ++ E L+ P+++RL+C T + G V ++ P K
Sbjct: 208 CGTCIVNVKEGGADTNRKSIDESSTLRENPESYRLSCVTF-----AYGDVTVETFPPIKA 262
Query: 181 HEW 183
+W
Sbjct: 263 AQW 265
>gi|412987640|emb|CCO20475.1| unknown protein [Bathycoccus prasinos]
Length = 154
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 76 PDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTC-MVEVIEGKEL 134
PDG T+ LR++ L +N+++Y + + L NC G G CGTC M+ +GK++
Sbjct: 49 PDGK---EISTSSSSGILRNLALENNVEIYEGFNKLL-NCGGNGQCGTCGMIITTDGKDV 104
Query: 135 LGSRTDKEKEKL--KRKPKNWRLACQTTV 161
L + T+ E++KL + K +RL+CQT +
Sbjct: 105 LSAPTEVERKKLGEAKLNKGYRLSCQTEI 133
>gi|223993101|ref|XP_002286234.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977549|gb|EED95875.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 275
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLS-------NCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
G LR +L+ I L P A+ NC GG C TC V V G ELL E
Sbjct: 180 GDNLRMALLSRGIKLNDPLAQRYDGKPTGSGNCGSGGLCRTCAVSVTRGGELLSPPKANE 239
Query: 143 KEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLP-EW 178
K+ L+ P+ WRLAC++ VG G VV+Q P +W
Sbjct: 240 KKMLEETPR-WRLACKSWVGYGMKEGDVVVQVNPRQW 275
>gi|224003811|ref|XP_002291577.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973353|gb|EED91684.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 318
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 72 SVLLPDGTPDIHFRT--ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+V+ G+ D RT A G LR ++ ++ I++Y + R +NC G CGTC+V +
Sbjct: 209 TVIQNKGSNDEELRTIEAKAGCNLRQVLTDNGINVYQSFTR-WTNCKGKQLCGTCIVNIA 267
Query: 130 EGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEW 183
G ++ E L+ P+++RL+C T + G + ++ P + +W
Sbjct: 268 NGSGDTNRKSLDEASTLRENPESYRLSCVTF-----AYGDITVETFPPIEASQW 316
>gi|428779764|ref|YP_007171550.1| ferredoxin [Dactylococcopsis salina PCC 8305]
gi|428694043|gb|AFZ50193.1| ferredoxin [Dactylococcopsis salina PCC 8305]
Length = 109
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 13/101 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LRD++L + +DLY A NC G GTCGTC VE IEG+ + + + +EK +L
Sbjct: 16 GENLRDVLLKNKVDLYNE-AASFINCYGLGTCGTCTVE-IEGE--VSAPSWQEKARLSLP 71
Query: 150 PKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYK 186
P + RLACQ V G V +++ + GHE K K
Sbjct: 72 PHHPNTTRRLACQVQV-----LGDVTVKKYEGFWGHEEKVK 107
>gi|414878388|tpg|DAA55519.1| TPA: hypothetical protein ZEAMMB73_916473, partial [Zea mays]
Length = 559
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 125 MVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPD 165
+VE+I+GKELL RT E LK+KP +WRLACQT VG +
Sbjct: 519 IVEIIDGKELLNERTSTENRYLKKKPDSWRLACQTIVGNKE 559
>gi|126659889|ref|ZP_01731014.1| Ferredoxin [Cyanothece sp. CCY0110]
gi|126618852|gb|EAZ89596.1| Ferredoxin [Cyanothece sp. CCY0110]
Length = 111
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G+ LR ++L +NIDLY A+ + NC G GTCGTC +E IEG + DK + L
Sbjct: 16 GENLRRVLLKNNIDLYNGQAKII-NCRGIGTCGTCALE-IEGLVSEANWKDKARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
KN RLACQT V
Sbjct: 74 SLEKNRRLACQTKV 87
>gi|172035687|ref|YP_001802188.1| hypothetical protein cce_0771 [Cyanothece sp. ATCC 51142]
gi|171697141|gb|ACB50122.1| hypothetical protein cce_0771 [Cyanothece sp. ATCC 51142]
Length = 123
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G+ LR ++L +NIDLY A+ + NC G GTCGTC +E IEG + D+ + L
Sbjct: 28 GENLRRVLLRNNIDLYNGQAKII-NCRGIGTCGTCALE-IEGLVSEANWKDQARRSLPPH 85
Query: 148 RKPKNWRLACQTTV 161
KN RLACQT V
Sbjct: 86 SLDKNRRLACQTKV 99
>gi|219119177|ref|XP_002180355.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408612|gb|EEC48546.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 356
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYAR-----PLSNCAGGGTCGTCMVEVIEGKEL 134
PD+ G+ LR ML + L +R + +C GTC TC V++++G L
Sbjct: 250 PDVKLEL-FAGENLRRSMLVKGVKLNDALSRRFDSGGIGDCGAEGTCATCAVKIVQGGNL 308
Query: 135 LGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLP-EW 178
R +E + L ++ NWR++C+T VG G + ++ P +W
Sbjct: 309 CNPRAQQEAQILVKR-ANWRMSCKTIVGYGMKEGSMTVRVSPRQW 352
>gi|354554927|ref|ZP_08974230.1| ferredoxin [Cyanothece sp. ATCC 51472]
gi|353553081|gb|EHC22474.1| ferredoxin [Cyanothece sp. ATCC 51472]
Length = 111
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G+ LR ++L +NIDLY A+ + NC G GTCGTC +E IEG + D+ + L
Sbjct: 16 GENLRRVLLRNNIDLYNGQAKII-NCRGIGTCGTCALE-IEGLVSEANWKDQARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
KN RLACQT V
Sbjct: 74 SLDKNRRLACQTKV 87
>gi|224143053|ref|XP_002324835.1| predicted protein [Populus trichocarpa]
gi|222866269|gb|EEF03400.1| predicted protein [Populus trichocarpa]
Length = 55
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 128 VIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+++ K++L R D E LK+ P++WR ACQT +++G VV+Q++P+WK
Sbjct: 3 ILDVKDILNERADTELRYLKKGPESWRPACQTIFENKENSGKVVVQRIPQWK 54
>gi|428306522|ref|YP_007143347.1| ferredoxin [Crinalium epipsammum PCC 9333]
gi|428248057|gb|AFZ13837.1| ferredoxin [Crinalium epipsammum PCC 9333]
Length = 112
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-KR 148
G LR ++L + ID+Y A+ + NC G GTCGTC V+V EG+ S T+K + KL
Sbjct: 16 GSNLRQVLLTNGIDVYNGKAKVI-NCTGIGTCGTCAVQV-EGEVSEASWTEKTRLKLPPH 73
Query: 149 KPK-NWRLACQTTV 161
PK N RL+CQT V
Sbjct: 74 SPKQNRRLSCQTQV 87
>gi|219128739|ref|XP_002184563.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404013|gb|EEC43962.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 357
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLS-----NCAGGGTCGTCMVEVIEGKELLGSRTDKEKE 144
G+ LR ML + L P A+ NC GG C TC V V G LL + EK+
Sbjct: 264 GENLRQGMLIRGVKLNDPLAKRFDSKNGGNCGAGGLCRTCSVSVTSGINLLNPQRLAEKQ 323
Query: 145 KLKRKPKNWRLACQTTVGTPDSTGLVVIQQLP-EW 178
L P+ WRLAC+ VG G + ++ P +W
Sbjct: 324 MLADNPR-WRLACKAIVGFGMQEGEMTVRVNPRQW 357
>gi|224009734|ref|XP_002293825.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970497|gb|EED88834.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 289
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 72 SVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG 131
+V PD DI G + ++ N +I+LY + L NC G G CG C VE+++
Sbjct: 188 TVQQPD-KADIVLEAKVGDNLRKTLLANKDIELYRGLKKKLGNCGGSGQCGFCAVELVDE 246
Query: 132 KE--LLGSRTDKEKEKLK--RKPKNWRLACQTTVGTP 164
E + G R++ E K+K + K RLAC + P
Sbjct: 247 TEGKVWGERSEYEDNKIKGGEERKGQRLACLNNIVGP 283
>gi|311748253|ref|ZP_07722038.1| ferredoxin, 2Fe-2S [Algoriphagus sp. PR1]
gi|126576747|gb|EAZ80995.1| ferredoxin, 2Fe-2S [Algoriphagus sp. PR1]
Length = 106
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTVG 162
L+ C G C TC VEV+EGK+ LG TD E ++L+ P+ + RLACQ +G
Sbjct: 38 LATCGGMALCATCHVEVLEGKDELGEATDMELDQLENLPEYYPTSRLACQIRIG 91
>gi|75909424|ref|YP_323720.1| ferredoxin [Anabaena variabilis ATCC 29413]
gi|75703149|gb|ABA22825.1| Ferredoxin [Anabaena variabilis ATCC 29413]
Length = 112
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G+ LR ++L S IDLY A+ + NC G G+CGTC V+V EG+ + + D+ + L
Sbjct: 16 GENLRKVLLKSGIDLYNSGAKVI-NCRGIGSCGTCAVQV-EGEVSVANWRDQARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
K+ RLACQT V
Sbjct: 74 SPTKDLRLACQTQV 87
>gi|17231013|ref|NP_487561.1| hypothetical protein all3521 [Nostoc sp. PCC 7120]
gi|17132654|dbj|BAB75220.1| all3521 [Nostoc sp. PCC 7120]
Length = 112
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G+ LR ++L S IDLY A+ + NC G G+CGTC V+V EG+ + + D+ + L
Sbjct: 16 GENLRKVLLKSGIDLYNSGAKVI-NCRGIGSCGTCAVQV-EGEVSVANWRDQARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
K+ RLACQT V
Sbjct: 74 SPTKDLRLACQTQV 87
>gi|219123585|ref|XP_002182103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406704|gb|EEC46643.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
TA G +R++ +++ I++Y R +NC G CGTC+V V +G ++ E
Sbjct: 211 TAPVGVNVRELCVDNGINVYQSVTR-WTNCKGKQLCGTCIVNVSDGAIQTNRKSMDEDST 269
Query: 146 LKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEW 183
L+ P ++RL+C T + G V I+ P + +W
Sbjct: 270 LRENPDSYRLSCVTF-----AYGDVTIETFPPVQASQW 302
>gi|428213977|ref|YP_007087121.1| ferredoxin [Oscillatoria acuminata PCC 6304]
gi|428002358|gb|AFY83201.1| ferredoxin [Oscillatoria acuminata PCC 6304]
Length = 112
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L++ IDLY A+ L NC G G+CGTC VE IEG+ + D+ + L
Sbjct: 16 GANLRQVLLDNGIDLYNGKAK-LINCRGLGSCGTCAVE-IEGEISAPNWRDRTRRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
KN RLACQT V
Sbjct: 74 SPAKNLRLACQTQV 87
>gi|428775199|ref|YP_007166986.1| ferredoxin [Halothece sp. PCC 7418]
gi|428689478|gb|AFZ42772.1| ferredoxin [Halothece sp. PCC 7418]
Length = 120
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L +NI++Y AR + NC G GTCGTC VEV EG+ + R +EK +L
Sbjct: 16 GANLRKVLLENNIEVYNGNARVI-NCHGLGTCGTCTVEV-EGE--VSPRGQREKLRLSLP 71
Query: 150 PK----NWRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYKKIPTSELP 194
P RL+CQ V G V + + + G E K P S P
Sbjct: 72 PHKEETTRRLSCQVQV-----LGDVKVTKFTGFWGQEETVKWSPDSSTP 115
>gi|443313400|ref|ZP_21043011.1| ferredoxin [Synechocystis sp. PCC 7509]
gi|442776343|gb|ELR86625.1| ferredoxin [Synechocystis sp. PCC 7509]
Length = 112
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++LN++I+LY A + NC G GTCGTC V ++EG+ + DK + L
Sbjct: 16 GDNLRQVLLNNDINLYNGNA-SIINCHGLGTCGTCAV-MVEGEVSEVTWQDKTRRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
KN RLACQT V
Sbjct: 74 SPTKNLRLACQTKV 87
>gi|254425323|ref|ZP_05039041.1| hypothetical protein S7335_5486 [Synechococcus sp. PCC 7335]
gi|196192812|gb|EDX87776.1| hypothetical protein S7335_5486 [Synechococcus sp. PCC 7335]
Length = 114
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L++ IDLY P A + NC G GTCGTC V IEG + D + L
Sbjct: 16 GANLRQVLLDNGIDLYSPRANYI-NCMGIGTCGTCAV-AIEGDVSKANWRDIARRSLPPH 73
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
K+ RLACQT V G + + + + GH+
Sbjct: 74 DAQKSLRLACQTQV-----LGDIKVTKFEGFWGHQ 103
>gi|427724141|ref|YP_007071418.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427355861|gb|AFY38584.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 108
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR ++L N LY A + NC G G+CGTC VE IEG+ L R KEK +L
Sbjct: 16 GENLRKVLLKHNAALYNGKAN-IINCMGIGSCGTCAVE-IEGE--LPERNWKEKARLSFP 71
Query: 150 PKN----WRLACQTTV 161
P N RLACQ TV
Sbjct: 72 PHNPEKQRRLACQITV 87
>gi|427731506|ref|YP_007077743.1| ferredoxin [Nostoc sp. PCC 7524]
gi|427367425|gb|AFY50146.1| ferredoxin [Nostoc sp. PCC 7524]
Length = 112
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR I+L S+IDLY A+ + NC G G+CGTC V+V EG+ + D+ + L
Sbjct: 16 GTNLRKILLKSSIDLYNDGAKVI-NCRGIGSCGTCAVKV-EGEVSAANWRDQARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
K+ RLACQT V
Sbjct: 74 SPTKDLRLACQTQV 87
>gi|427739914|ref|YP_007059458.1| ferredoxin [Rivularia sp. PCC 7116]
gi|427374955|gb|AFY58911.1| ferredoxin [Rivularia sp. PCC 7116]
Length = 108
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L++NIDLY A+ + NC G GTCGTC V I+G+ + + KEK +L
Sbjct: 16 GSNLRKVLLDNNIDLYNGNAKTI-NCRGLGTCGTCAV-AIQGE--VSEPSWKEKTRLGLP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 72 PHSSESDRRLACQTKV 87
>gi|158336247|ref|YP_001517421.1| 2Fe-2S type ferredoxin [Acaryochloris marina MBIC11017]
gi|158306488|gb|ABW28105.1| ferredoxin, 2Fe-2S type, putative [Acaryochloris marina MBIC11017]
Length = 110
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L + +DLY AR L NC G GTCGTC V ++ G +R D+ + L
Sbjct: 16 GANLRQVLLENQVDLYNGQAR-LINCHGIGTCGTCAVAIM-GDVSEVNRRDRMRRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
++ RLACQT V
Sbjct: 74 DSQRDLRLACQTKV 87
>gi|404450875|ref|ZP_11015852.1| ferredoxin [Indibacter alkaliphilus LW1]
gi|403763537|gb|EJZ24492.1| ferredoxin [Indibacter alkaliphilus LW1]
Length = 106
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTVGTPDSTG 168
L+ C G C TC VEVIEG++ LG TD E ++L+ P+ + RLACQ + +P G
Sbjct: 38 LATCGGMALCATCHVEVIEGEDELGEATDPELDQLENLPEYFPTSRLACQVRI-SPLLEG 96
Query: 169 LVV 171
V+
Sbjct: 97 AVI 99
>gi|428201511|ref|YP_007080100.1| ferredoxin [Pleurocapsa sp. PCC 7327]
gi|427978943|gb|AFY76543.1| ferredoxin [Pleurocapsa sp. PCC 7327]
Length = 116
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR +++ + IDLY A+ + NC G G+CGTC VE IEG+ + DK + L
Sbjct: 16 GANLRRVLIENGIDLYNGNAK-IINCMGIGSCGTCAVE-IEGEVSEPNWKDKTRRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
KN RLACQT V
Sbjct: 74 SPTKNRRLACQTKV 87
>gi|440748303|ref|ZP_20927557.1| Ferredoxin, 2Fe-2S [Mariniradius saccharolyticus AK6]
gi|436483507|gb|ELP39561.1| Ferredoxin, 2Fe-2S [Mariniradius saccharolyticus AK6]
Length = 107
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTVG 162
L+ C G C TC VE++EGK+ LG TD E ++L+ P+ + RL+CQ +G
Sbjct: 38 LATCGGMALCATCHVEILEGKDGLGDATDTELDQLENLPEYFPTSRLSCQIRIG 91
>gi|343085889|ref|YP_004775184.1| ferredoxin [Cyclobacterium marinum DSM 745]
gi|342354423|gb|AEL26953.1| ferredoxin [Cyclobacterium marinum DSM 745]
Length = 106
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTV 161
L+ C G C TC VEV+EGK+ LG TD E ++L+ P+ + RLACQ +
Sbjct: 38 LATCGGMALCATCHVEVLEGKDGLGDATDVELDQLEALPEYYPTSRLACQVRI 90
>gi|390945341|ref|YP_006409102.1| ferredoxin [Belliella baltica DSM 15883]
gi|390418769|gb|AFL86347.1| ferredoxin [Belliella baltica DSM 15883]
Length = 106
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTVGTPDSTG 168
L+ C G C TC VEV+EG++ LG TD E ++L+ P+ + RLACQ + +P G
Sbjct: 38 LATCGGMALCATCHVEVMEGEDELGEATDVELDQLENLPEYFPTSRLACQVRI-SPLLEG 96
Query: 169 LVV 171
V+
Sbjct: 97 AVI 99
>gi|409406866|ref|ZP_11255328.1| ferredoxin [2Fe-2S]-type protein [Herbaspirillum sp. GW103]
gi|386435415|gb|EIJ48240.1| ferredoxin [2Fe-2S]-type protein [Herbaspirillum sp. GW103]
Length = 112
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H VL P+G+ A G+ L D +L+S+ID+ C C TC V + E
Sbjct: 9 HPVLCPEGS----VIDAPAGKTLCDALLDSDIDIE-------HACEKSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDST 167
G E LG TDKE++ L RL+CQ +G D T
Sbjct: 58 GFETLGEPTDKEEDLLDMAWGLEATSRLSCQVVLGEEDLT 97
>gi|395211671|ref|ZP_10399445.1| ferredoxin [Pontibacter sp. BAB1700]
gi|394457616|gb|EJF11742.1| ferredoxin [Pontibacter sp. BAB1700]
Length = 109
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGT 123
VVN F S DG+PD A G+ + D+ LN++I L NC G C T
Sbjct: 3 VVNITFKFS----DGSPD-QVHPAVEGESVLDVALNNDIKLQ-------HNCGGVCGCST 50
Query: 124 CMVEVIEGKELLGSRTDKEKEKLKR--KPK-NWRLACQTTV 161
C V + G + L TDKE++ + R P+ N RL CQ V
Sbjct: 51 CHVYIESGMDDLPEITDKEEDYIDRAVDPRINSRLGCQCVV 91
>gi|170076880|ref|YP_001733518.1| ferredoxin-like protein [Synechococcus sp. PCC 7002]
gi|169884549|gb|ACA98262.1| ferredoxin-like protein [Synechococcus sp. PCC 7002]
Length = 109
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L + I LY A+ + NC G GTCGTC VE+ + +++ KEK +L
Sbjct: 16 GDNLRKVLLANKISLYNGNAKTI-NCHGLGTCGTCAVEIT---GPVSAQSWKEKTRLSLP 71
Query: 150 PKN----WRLACQTTV 161
P N RLACQ +V
Sbjct: 72 PHNPDKERRLACQVSV 87
>gi|398834085|ref|ZP_10592033.1| ferredoxin, 2Fe-2S type, ISC system [Herbaspirillum sp. YR522]
gi|398220606|gb|EJN07050.1| ferredoxin, 2Fe-2S type, ISC system [Herbaspirillum sp. YR522]
Length = 112
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H VL P G+ A GQ L D +L S+ID+ C C TC V + E
Sbjct: 9 HPVLCPQGS----VIDAPSGQTLCDALLGSDIDIE-------HACEKSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDST 167
G E LG TDKE++ L RL+CQ +G D T
Sbjct: 58 GFETLGEPTDKEEDLLDMAWGLEATSRLSCQVVLGEDDLT 97
>gi|218440346|ref|YP_002378675.1| hydrogenase subunit [Cyanothece sp. PCC 7424]
gi|218173074|gb|ACK71807.1| putative hydrogenase component [Cyanothece sp. PCC 7424]
Length = 112
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L I+LY A+ L NC G G+CGTC VE IEG+ + T KEK +L
Sbjct: 16 GANLRQVLLKHGIELYNGNAK-LINCLGLGSCGTCAVE-IEGE--VTDLTWKEKARLSFP 71
Query: 150 P----KNWRLACQTTV 161
P K RLACQ V
Sbjct: 72 PHSPTKKRRLACQIGV 87
>gi|434406478|ref|YP_007149363.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
gi|428260733|gb|AFZ26683.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
Length = 113
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKP 150
LR I+L++ IDLY A+ + NC G G+CGTC V+V EG+ + DK + L
Sbjct: 19 LRKILLHNGIDLYNGNAKVI-NCRGIGSCGTCAVKV-EGEVSAANWRDKTRRSLPPHSPT 76
Query: 151 KNWRLACQTTVGTPD 165
+ RLACQT V D
Sbjct: 77 SDLRLACQTEVLDDD 91
>gi|448561908|ref|ZP_21635041.1| ferredoxin-like protein [Haloferax prahovense DSM 18310]
gi|445720004|gb|ELZ71681.1| ferredoxin-like protein [Haloferax prahovense DSM 18310]
Length = 125
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR AC G LRD++ + + ++ NC GGG+CGTC V V + +
Sbjct: 2 PTVHFRGREIACDRGDVLRDVLRAAGEPPHNGHSSWF-NCRGGGSCGTCAVRV---RGPV 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
RT KE+ +L+ P + RLACQT V
Sbjct: 58 TYRTKKERRRLRFPPHDSDSGLRLACQTVV 87
>gi|359458745|ref|ZP_09247308.1| 2Fe-2S type ferredoxin [Acaryochloris sp. CCMEE 5410]
Length = 110
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L + +++Y AR L NC G GTCGTC V I G+ +R D+ + L
Sbjct: 16 GANLRQVLLENQVEIYNGQAR-LINCHGIGTCGTCAV-AITGEVSEVNRRDRIRRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
++ RLACQT V
Sbjct: 74 DSQRDLRLACQTKV 87
>gi|448602800|ref|ZP_21656735.1| ferredoxin-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445747152|gb|ELZ98609.1| ferredoxin-like protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 128
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ NC GGG+CGTC VEV + +
Sbjct: 2 PTVHFRGREIECDRGDVLRDVLRAAGESPHNGHS-SWFNCRGGGSCGTCAVEV---RGPV 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
RT KE+ +L+ P + RLACQT V
Sbjct: 58 TYRTKKERRRLRFPPHDPDSGLRLACQTVV 87
>gi|448621248|ref|ZP_21668223.1| ferredoxin-like protein [Haloferax denitrificans ATCC 35960]
gi|445755741|gb|EMA07123.1| ferredoxin-like protein [Haloferax denitrificans ATCC 35960]
Length = 128
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ NC GGG+CGTC VEV + +
Sbjct: 2 PTVHFRGREIECDRGDVLRDVLRAAGESPHNGHSSWF-NCRGGGSCGTCAVEV---RGPV 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
RT KE+ +L+ P + RLACQT V
Sbjct: 58 TYRTKKERRRLRFPPHDPDSGLRLACQTVV 87
>gi|428318398|ref|YP_007116280.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
gi|428242078|gb|AFZ07864.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
Length = 112
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+++L + IDLY A+ + NC G GTCGTC V +EG+ + +EK +L
Sbjct: 16 GANLREVLLKNGIDLYNGNAKVI-NCHGLGTCGTCAV-TVEGE--VSEPQWREKARLSVP 71
Query: 150 P----KNWRLACQTTV 161
P N RL+CQT V
Sbjct: 72 PHSPASNRRLSCQTKV 87
>gi|406661026|ref|ZP_11069151.1| Putidaredoxin [Cecembia lonarensis LW9]
gi|405555109|gb|EKB50156.1| Putidaredoxin [Cecembia lonarensis LW9]
Length = 106
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTVGTPDSTG 168
L+ C G C TC VE++EG+ LG TD E ++L+ P+ + RLACQ + +P G
Sbjct: 38 LATCGGMALCATCHVEILEGENELGEATDAELDQLENLPEYFPTSRLACQIRI-SPLLEG 96
Query: 169 LVV 171
V+
Sbjct: 97 AVI 99
>gi|428773166|ref|YP_007164954.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
gi|428687445|gb|AFZ47305.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
Length = 111
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 9/95 (9%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G+ LR I+L ++++LY A+ + NC G G+CGTC V+ IEG+ + DK +
Sbjct: 16 GENLRKILLKNDLNLYNGKAKYI-NCMGIGSCGTCAVQ-IEGEVNAPNWKDKARRSFPPH 73
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
+ ++ RLACQT V G + + + + GH+
Sbjct: 74 SRDRDLRLACQTEV-----LGDITVTKYDGFWGHK 103
>gi|253997045|ref|YP_003049109.1| ferredoxin, 2Fe-2S type, ISC system [Methylotenera mobilis JLW8]
gi|253983724|gb|ACT48582.1| ferredoxin, 2Fe-2S type, ISC system [Methylotenera mobilis JLW8]
Length = 113
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 19/111 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H L PDG I +T G+ + D++LN++ID+ C C TC V V E
Sbjct: 9 HVELCPDGAA-IEAQT---GESICDVLLNNDIDIDHA-------CDKACACTTCHVIVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L T++E + L + N RL+CQT VGT D LVV ++P++
Sbjct: 58 GFKSLNESTEQEDDLLDKAWGLEPNSRLSCQTLVGTED---LVV--EIPKY 103
>gi|119494564|ref|ZP_01624702.1| hypothetical protein L8106_18037 [Lyngbya sp. PCC 8106]
gi|119452096|gb|EAW33306.1| hypothetical protein L8106_18037 [Lyngbya sp. PCC 8106]
Length = 111
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR ++L + IDLY A + NC G GTCGTC VE IEG+ + +EK +L
Sbjct: 16 GENLRQVLLKNGIDLYNGQASVI-NCRGLGTCGTCAVE-IEGE--VSELQWREKTRLSLP 71
Query: 150 PK----NWRLACQTTV 161
P + RLACQ V
Sbjct: 72 PHSPQTSRRLACQVKV 87
>gi|319779392|ref|YP_004130305.1| (2Fe-2S) ferredoxin [Taylorella equigenitalis MCE9]
gi|397661630|ref|YP_006502330.1| ferredoxin [Taylorella equigenitalis ATCC 35865]
gi|317109416|gb|ADU92162.1| Ferredoxin, 2Fe-2S [Taylorella equigenitalis MCE9]
gi|394349809|gb|AFN35723.1| ferredoxin [Taylorella equigenitalis ATCC 35865]
gi|399115024|emb|CCG17820.1| ferredoxin [Taylorella equigenitalis 14/56]
Length = 111
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H LLP+G + A G L +LN+ +D+ C C TC V V+E
Sbjct: 9 HETLLPEG---LVIENAQKGVSLCKNLLNNGVDIEHA-------CEMVCACTTCHVYVVE 58
Query: 131 GKELLGSRTDKEKEKLKR----KPKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G E L TD E++ L + KP N RL+CQ VG D ++ Q+P++
Sbjct: 59 GFESLNESTDDEEDMLDKAWGLKP-NSRLSCQVVVGDED-----LVVQIPKY 104
>gi|443324468|ref|ZP_21053219.1| ferredoxin [Xenococcus sp. PCC 7305]
gi|442795931|gb|ELS05267.1| ferredoxin [Xenococcus sp. PCC 7305]
Length = 109
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G+ LR ++L + ++LY A+ + NC G GTCGTC VE++ G+ + DK + L
Sbjct: 16 GENLRRVLLENKLNLYNGNAKYI-NCMGIGTCGTCAVEIV-GEVSAPNWKDKARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
+N RLACQT V
Sbjct: 74 NPNRNRRLACQTKV 87
>gi|67923529|ref|ZP_00517003.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|416397961|ref|ZP_11686751.1| Ferredoxin [Crocosphaera watsonii WH 0003]
gi|67854615|gb|EAM49900.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|357262622|gb|EHJ11735.1| Ferredoxin [Crocosphaera watsonii WH 0003]
Length = 119
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR +++N IDL+ ++ + NC G G+CGTC +E IEG L+ K+K +
Sbjct: 16 GENLRRVLINHKIDLHNGNSKII-NCRGIGSCGTCSLE-IEG--LVSEANWKDKARRSFP 71
Query: 150 P----KNWRLACQTTV 161
P KN RLACQT V
Sbjct: 72 PHSPEKNRRLACQTKV 87
>gi|62185042|ref|YP_219827.1| ferredoxin [Chlamydophila abortus S26/3]
gi|424825096|ref|ZP_18250083.1| ferredoxin, root r-b2 [Chlamydophila abortus LLG]
gi|62148109|emb|CAH63866.1| ferredoxin, root r-b2 [Chlamydophila abortus S26/3]
gi|333410195|gb|EGK69182.1| ferredoxin, root r-b2 [Chlamydophila abortus LLG]
Length = 91
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKL-KRKPKNWRLACQTTV 161
G CGTC++EV+EGKE L S T++EK+ L + + N RLACQ +
Sbjct: 39 GVCGTCVIEVVEGKENLSSFTEEEKDFLGESEDSNERLACQCKI 82
>gi|428224955|ref|YP_007109052.1| ferredoxin [Geitlerinema sp. PCC 7407]
gi|427984856|gb|AFY66000.1| ferredoxin [Geitlerinema sp. PCC 7407]
Length = 112
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L + + LY A+ + NC G GTCGTC V IEG+ + D+ + L
Sbjct: 16 GANLRQVLLQNGVALYNGQAKVI-NCHGIGTCGTCAV-AIEGEVSEANWRDQARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
+N RLACQT V
Sbjct: 74 SPAQNRRLACQTQV 87
>gi|397647627|gb|EJK77785.1| hypothetical protein THAOC_00360, partial [Thalassiosira oceanica]
Length = 183
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI--EGKELLGSRTDKEK---- 143
G LR ML + + + +R L NC G GTCGTC VE+ EG L RT +E+
Sbjct: 85 GATLRTSMLKNGMSPHNGRSR-LINCRGLGTCGTCAVEIYGKEGSILPKERTAQERIRLN 143
Query: 144 ---EKLKRKPKNWRLACQTTV 161
L ++ N RLACQ V
Sbjct: 144 FPPHNLAKQSDNLRLACQVQV 164
>gi|428209100|ref|YP_007093453.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
gi|428011021|gb|AFY89584.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
Length = 121
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L +I+LY A+ + NC G G+CGTC V ++EG+ + DK + L
Sbjct: 25 GANLRQVLLKHDIELYNGGAKVI-NCHGIGSCGTCAV-LVEGEVSEPNWQDKTRRSLPPH 82
Query: 148 RKPKNWRLACQTTV 161
+N RLACQT V
Sbjct: 83 SPTRNLRLACQTKV 96
>gi|398348014|ref|ZP_10532717.1| adenylate/guanylate cyclase [Leptospira broomii str. 5399]
Length = 543
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C G C TC V V+EG + L R DKE +RK P+N RLACQ+ V
Sbjct: 37 CGGNARCSTCRVLVLEGVDNLSPRNDKESALAERKGFPENVRLACQSRV 85
>gi|149280699|ref|ZP_01886810.1| ferrodoxin [Pedobacter sp. BAL39]
gi|149228564|gb|EDM33972.1| ferrodoxin [Pedobacter sp. BAL39]
Length = 109
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDSTG 168
L+ C G C TC V+V+EG+E L +D E L P N RLACQ + P G
Sbjct: 42 LATCGGMALCATCCVDVLEGEEKLNEMSDDEYAMLDTLPDLLPNSRLACQLQL-NPAMDG 100
Query: 169 LVV 171
LVV
Sbjct: 101 LVV 103
>gi|390444188|ref|ZP_10231970.1| ferredoxin [Nitritalea halalkaliphila LW7]
gi|389665197|gb|EIM76672.1| ferredoxin [Nitritalea halalkaliphila LW7]
Length = 107
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 112 LSNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNW---RLACQTTVGTPDST 167
L+ C G C TC VE++E G + LG TD E ++L+ P+ + RLACQ + +PD
Sbjct: 38 LATCGGMALCATCHVEILEGGADDLGEATDVELDQLENLPEYFPTSRLACQVRI-SPDLE 96
Query: 168 GLVV 171
G V+
Sbjct: 97 GAVI 100
>gi|76803089|ref|YP_331184.1| ferredoxin I 4 [Natronomonas pharaonis DSM 2160]
gi|76558954|emb|CAI50550.1| ferredoxin (2Fe-2S) [Natronomonas pharaonis DSM 2160]
Length = 109
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRDI+LN+ + + + L NC G GTCGTC VE+ +G R E+ +L
Sbjct: 16 GAILRDILLNAGLSPHNGRS-DLLNCRGLGTCGTCAVEIDGAVSNIGRR---ERSRLAVP 71
Query: 150 PKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGHEWK 184
P + RLACQT V G V + + P + G +
Sbjct: 72 PHDPESGLRLACQTRV-----LGDVTVTKYPGFWGQHTR 105
>gi|389848960|ref|YP_006351196.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|448619385|ref|ZP_21667322.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|388246266|gb|AFK21209.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|445745991|gb|ELZ97457.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
Length = 110
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 80 PDIHFR----TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P I F+ A G LR +L++ + + A+ +NC G CGTC VE++EG +
Sbjct: 2 PTIEFKGETIEADVGDNLRQTLLDAGLSPHNGKAQ-YTNCRGNALCGTCAVEIVEGD--V 58
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
+ T KE+ +LK P + RL+CQ T+
Sbjct: 59 SNPTGKERRRLKLPPHSLDSGLRLSCQLTI 88
>gi|427419738|ref|ZP_18909921.1| ferredoxin [Leptolyngbya sp. PCC 7375]
gi|425762451|gb|EKV03304.1| ferredoxin [Leptolyngbya sp. PCC 7375]
Length = 111
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L+++I LY A L NC G G+CGTC V +IEG+ + D+ + L
Sbjct: 19 GANLRRVLLDNDIALYNGNAN-LINCRGIGSCGTCAV-MIEGEVSAANWKDRGRRSLPPH 76
Query: 148 RKPKNWRLACQTTV 161
+ RLACQTTV
Sbjct: 77 TPERPLRLACQTTV 90
>gi|448479063|ref|ZP_21603987.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum arcis JCM 13916]
gi|448512238|ref|ZP_21616352.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 9100]
gi|448520860|ref|ZP_21618193.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 10118]
gi|445694558|gb|ELZ46683.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 9100]
gi|445702996|gb|ELZ54935.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 10118]
gi|445822697|gb|EMA72460.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum arcis JCM 13916]
Length = 135
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR ++L++ + Y P R L NC G G C TC V V EG D ++L +
Sbjct: 38 GRNLRRVLLDAGLSPYAPATRRL-NCGGRGLCATCGVRVREGPP-----ADHWHDRLADR 91
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ +V P + LV
Sbjct: 92 FGYPRLSCQISVDRPMTVALV 112
>gi|448448505|ref|ZP_21591236.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum litoreum JCM 13561]
gi|445814521|gb|EMA64482.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum litoreum JCM 13561]
Length = 135
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR ++L++ + Y P R L NC G G C TC V V EG D ++L +
Sbjct: 38 GRNLRRVLLDAGLSPYAPATRRL-NCGGRGLCATCGVRVREGPP-----ADHWHDRLADR 91
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ +V P + LV
Sbjct: 92 FGYPRLSCQISVDRPMTVALV 112
>gi|186684189|ref|YP_001867385.1| ferredoxin [Nostoc punctiforme PCC 73102]
gi|186466641|gb|ACC82442.1| ferredoxin [Nostoc punctiforme PCC 73102]
Length = 126
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-KR 148
G LR I+L + I LY A+ + NC G G+CGTC V+V EG+ + D+ + L
Sbjct: 30 GSNLRTILLQNGIHLYNDGAKVI-NCRGIGSCGTCAVKV-EGEVSAANWRDRARRSLPPH 87
Query: 149 KPK-NWRLACQTTV 161
PK + RLACQT V
Sbjct: 88 SPKTDLRLACQTQV 101
>gi|397605147|gb|EJK58903.1| hypothetical protein THAOC_20937 [Thalassiosira oceanica]
Length = 248
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI--EGKELLGSRTDKEK---- 143
G LR ML + + + +R L NC G GTCGTC VE+ EG L RT +E+
Sbjct: 121 GATLRTSMLKNGMSPHNGRSR-LINCRGLGTCGTCAVEIYGREGSILPMERTAQERIRLN 179
Query: 144 ---EKLKRKPKNWRLACQTTV 161
L ++ N RLACQ V
Sbjct: 180 FPPHNLAKQSDNLRLACQVQV 200
>gi|448424091|ref|ZP_21582217.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum terrestre JCM 10247]
gi|445682756|gb|ELZ35169.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum terrestre JCM 10247]
Length = 135
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR ++L++ + Y P R L NC G G C TC V V EG D ++L +
Sbjct: 38 GRNLRRVLLDAGLSPYAPATRRL-NCGGRGLCATCGVRVREGPP-----ADHWHDRLADR 91
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ +V P + LV
Sbjct: 92 FGYPRLSCQISVDRPMTVALV 112
>gi|431799955|ref|YP_007226859.1| ferredoxin [Echinicola vietnamensis DSM 17526]
gi|430790720|gb|AGA80849.1| ferredoxin [Echinicola vietnamensis DSM 17526]
Length = 106
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTV 161
L+ C G C TC VEV+ GK+ LG TD E ++L+ P+ + RLACQ +
Sbjct: 38 LATCGGMALCATCHVEVLGGKDGLGEATDVELDQLEALPEMYDTSRLACQIRI 90
>gi|29840189|ref|NP_829295.1| ferredoxin [Chlamydophila caviae GPIC]
gi|29834537|gb|AAP05173.1| ferredoxin [Chlamydophila caviae GPIC]
Length = 91
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC++EV+EGKE L TD+EK+ L + N RLACQ +
Sbjct: 39 GVCGTCVIEVLEGKENLSDFTDEEKDFLGEPEDSNERLACQCKI 82
>gi|300312438|ref|YP_003776530.1| ferredoxin [2Fe-2S]-type protein [Herbaspirillum seropedicae SmR1]
gi|300075223|gb|ADJ64622.1| ferredoxin [2Fe-2S]-type protein [Herbaspirillum seropedicae SmR1]
Length = 112
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H VL P+G+ A G+ L D +L+S+ID+ C C TC V + E
Sbjct: 9 HPVLCPEGS----VIDAPAGKTLCDALLDSDIDIE-------HACEKSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDST 167
G E L TDKE++ L RL+CQ +G D T
Sbjct: 58 GFETLDDPTDKEEDLLDMAWGLEATSRLSCQVVLGEDDLT 97
>gi|434389560|ref|YP_007100171.1| ferredoxin [Chamaesiphon minutus PCC 6605]
gi|428020550|gb|AFY96644.1| ferredoxin [Chamaesiphon minutus PCC 6605]
Length = 108
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L + +DLY A+ + NC G GTCGTC V +EG + D +
Sbjct: 16 GANLRQVLLANGVDLYNGNAK-IINCMGIGTCGTCAV-ALEGDVSAPNWKDTARRSFPPH 73
Query: 148 RKPKNWRLACQTTV 161
+N RLACQT V
Sbjct: 74 TPSRNLRLACQTQV 87
>gi|448571518|ref|ZP_21639777.1| ferredoxin-like protein [Haloferax lucentense DSM 14919]
gi|448596272|ref|ZP_21653612.1| ferredoxin-like protein [Haloferax alexandrinus JCM 10717]
gi|445721863|gb|ELZ73527.1| ferredoxin-like protein [Haloferax lucentense DSM 14919]
gi|445741960|gb|ELZ93458.1| ferredoxin-like protein [Haloferax alexandrinus JCM 10717]
Length = 140
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ NC GGG+CGTC V V + +
Sbjct: 2 PTVHFRGREIECDRGDVLRDVLRAAGESPHNGHSSWF-NCRGGGSCGTCAVRV---RGPV 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
RT KE+ +L+ P + RLACQT V
Sbjct: 58 TYRTKKERRRLRFPPHDSESGLRLACQTVV 87
>gi|290975964|ref|XP_002670711.1| predicted protein [Naegleria gruberi]
gi|284084273|gb|EFC37967.1| predicted protein [Naegleria gruberi]
Length = 122
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG-----SRTDKEKE 144
G LR ++ + I LY NC G GTCGTC V+V++ E RT E+
Sbjct: 20 GTNLRAALVENGIPLYNGKTETF-NCGGNGTCGTCAVQVLDIDEKTSVKDSMKRTSGEEM 78
Query: 145 KLKRKP-----KNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYKK 187
+LK P ++ RLACQ V T D V +Q+ GH++ K
Sbjct: 79 RLKLPPHFNKNQDIRLACQCQV-TQD----VSVQKFDGVCGHKFDKTK 121
>gi|440680602|ref|YP_007155397.1| ferredoxin [Anabaena cylindrica PCC 7122]
gi|428677721|gb|AFZ56487.1| ferredoxin [Anabaena cylindrica PCC 7122]
Length = 112
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKP 150
LR ++L + IDLY ++ L NC G G+CGTC V+V EG+ + D+ + L
Sbjct: 19 LRKVLLENGIDLYNGGSK-LINCRGIGSCGTCAVKV-EGEVSAANWRDQTRRSLPPHSPT 76
Query: 151 KNWRLACQTTV 161
N RLACQT V
Sbjct: 77 SNLRLACQTQV 87
>gi|409097128|ref|ZP_11217152.1| ferredoxin [Pedobacter agri PB92]
Length = 100
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 76 PDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
PDG+ H G L + + S D+ L+ C G C TC V+V+EG+E L
Sbjct: 4 PDGSVTPHEAPTDMGLSLMEFLKASEYDI-------LATCGGMALCATCCVDVLEGEEKL 56
Query: 136 GSRTDKEKEKLKRKPK---NWRLACQ 158
TD E L P N RLACQ
Sbjct: 57 NEMTDDEYAMLDTLPDLLPNSRLACQ 82
>gi|319649261|ref|ZP_08003420.1| hypothetical protein HMPREF1013_00024 [Bacillus sp. 2_A_57_CT2]
gi|317399066|gb|EFV79745.1| hypothetical protein HMPREF1013_00024 [Bacillus sp. 2_A_57_CT2]
Length = 116
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNI-DLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSR 138
P+IHF + K ++ +SNI + Y L N GGG CGTC+ + EG E L +
Sbjct: 2 PNIHFVNS---NKTLEVPEDSNILRMSLRYDGDLPNRCGGGICGTCVFKTEEGAEYLDNV 58
Query: 139 TDKEKEKLKRK--PKNWRLACQTTVGTPDST 167
+E+ KL + K +RL CQT V D T
Sbjct: 59 KIQERRKLGEEWLGKGYRLGCQTFVTDGDIT 89
>gi|262195893|ref|YP_003267102.1| ferredoxin [Haliangium ochraceum DSM 14365]
gi|262079240|gb|ACY15209.1| ferredoxin [Haliangium ochraceum DSM 14365]
Length = 104
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 74 LLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE 133
LPD T + FR G+++ D+ + +D+ + C G GTCG C V V+EG+E
Sbjct: 6 FLPDNTS-VPFRD---GERVFDVGRRAGLDIN-------TACVGKGTCGLCRVRVVEGEE 54
Query: 134 LLGSRTDKEKEKLKR--KPKNWRLACQTTVGTPDST 167
L TD+E+ L RL+C+ D T
Sbjct: 55 FLNPYTDEEQRHLGNVYHLTRVRLSCRAVAAGGDVT 90
>gi|448491969|ref|ZP_21608637.1| ferredoxin [Halorubrum californiensis DSM 19288]
gi|445692187|gb|ELZ44368.1| ferredoxin [Halorubrum californiensis DSM 19288]
Length = 149
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR ++L++ + Y P R L NC G G C TC V V EG + ++L +
Sbjct: 50 GRNLRRVLLDAGLSPYAPATRRL-NCGGRGICATCGVRVREGPP-----AEHWHDRLADR 103
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ V P + GLV
Sbjct: 104 FGYPRLSCQIPVDRPMTVGLV 124
>gi|300869574|ref|ZP_07114155.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332442|emb|CBN59355.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 112
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L ++I +Y A + NC G GTCGTC VEV EG+ + + +EK +L
Sbjct: 16 GANLRQVLLKNDIAVYNGKA-AIVNCHGLGTCGTCAVEV-EGE--VSEPSWREKTRLSLP 71
Query: 150 P----KNWRLACQTTV 161
P N RL+CQT V
Sbjct: 72 PHSPTSNRRLSCQTQV 87
>gi|448502973|ref|ZP_21612837.1| ferredoxin [Halorubrum coriense DSM 10284]
gi|445693375|gb|ELZ45527.1| ferredoxin [Halorubrum coriense DSM 10284]
Length = 127
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR +ML++ + Y R L NC G G C TC V V EG D ++L +
Sbjct: 39 GRNLRRVMLDAGLSPYAAATRRL-NCGGRGLCATCGVRVREGPA-----ADHWHDRLADR 92
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ +V P + LV
Sbjct: 93 FGYPRLSCQISVDRPMTVALV 113
>gi|334120022|ref|ZP_08494105.1| ferredoxin [Microcoleus vaginatus FGP-2]
gi|333457204|gb|EGK85829.1| ferredoxin [Microcoleus vaginatus FGP-2]
Length = 112
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+++L + ID+Y A+ + NC G GTCGTC V +EG+ + +EK +L
Sbjct: 16 GANLREVLLKNGIDVYNGNAKVI-NCHGLGTCGTCAV-TVEGE--VSESQWREKARLSVP 71
Query: 150 P----KNWRLACQTTV 161
P N RL+C T V
Sbjct: 72 PHSPASNRRLSCHTKV 87
>gi|255534001|ref|YP_003094373.1| ferredoxin [Pedobacter heparinus DSM 2366]
gi|255346985|gb|ACU06311.1| ferredoxin [Pedobacter heparinus DSM 2366]
Length = 109
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDSTG 168
L+ C G C TC V+V+EG++ L +D E L P N RLACQ + P G
Sbjct: 42 LATCGGMALCATCCVDVLEGEDKLNEMSDDEYAMLDTLPDVLPNSRLACQLQLN-PAMDG 100
Query: 169 LVV 171
LVV
Sbjct: 101 LVV 103
>gi|448586014|ref|ZP_21648186.1| ferredoxin-like protein [Haloferax gibbonsii ATCC 33959]
gi|445725632|gb|ELZ77255.1| ferredoxin-like protein [Haloferax gibbonsii ATCC 33959]
Length = 125
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ NC GGG+CGTC V V + +
Sbjct: 2 PTVHFRGREIECDRGDVLRDVLRAAGEPPHNGHSSWF-NCRGGGSCGTCAVRV---RGPV 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
RT KE+ +L+ P + RLACQT V
Sbjct: 58 TYRTKKERRRLRFPPHDSDSGLRLACQTVV 87
>gi|428217953|ref|YP_007102418.1| ferredoxin [Pseudanabaena sp. PCC 7367]
gi|427989735|gb|AFY69990.1| ferredoxin [Pseudanabaena sp. PCC 7367]
Length = 112
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L + +D+Y A+ + NC G GTCGTC V+V EG+ +K + L
Sbjct: 16 GANLRQVLLANGVDVYNGAAKTV-NCHGLGTCGTCAVQV-EGEASEAGWREKARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
+ ++ RL+CQT V
Sbjct: 74 KIDRDRRLSCQTKV 87
>gi|292655400|ref|YP_003535297.1| ferredoxin-like protein [Haloferax volcanii DS2]
gi|448292028|ref|ZP_21482702.1| ferredoxin-like protein [Haloferax volcanii DS2]
gi|291372964|gb|ADE05191.1| ferredoxin like protein [Haloferax volcanii DS2]
gi|445573547|gb|ELY28068.1| ferredoxin-like protein [Haloferax volcanii DS2]
Length = 125
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ NC GGG+CGTC V V +
Sbjct: 2 PTVHFRGREIECDRGDVLRDVLRAAGESPHNGHS-SWFNCRGGGSCGTCAVRV---RGPA 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
RT KE+ +L+ P + RLACQT V
Sbjct: 58 TYRTKKERRRLRFPPHDPDSGLRLACQTVV 87
>gi|448311884|ref|ZP_21501637.1| ferredoxin [Natronolimnobius innermongolicus JCM 12255]
gi|445603505|gb|ELY57467.1| ferredoxin [Natronolimnobius innermongolicus JCM 12255]
Length = 126
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 74 LLPDGTPDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
++ G P I FR C G+ LRD++L ++ + A L NC G GTCGTC V I
Sbjct: 1 MVATGMPTIDFRGREIECDRGRILRDVLLEADESPHNGRANYL-NCRGHGTCGTCAV-AI 58
Query: 130 EGKELLGSRTDKEKEKLKRKPKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKY 185
EG + T E+ +L P + RL+CQT V G VV+++ + G
Sbjct: 59 EGA--VSEPTAAERRRLSIPPHDPDSGLRLSCQTRV-----DGDVVVRKYDGFWGQHGPA 111
Query: 186 KKIPTSELP 194
+ E P
Sbjct: 112 EDDEAGESP 120
>gi|189500314|ref|YP_001959784.1| ferredoxin [Chlorobium phaeobacteroides BS1]
gi|189495755|gb|ACE04303.1| ferredoxin [Chlorobium phaeobacteroides BS1]
Length = 355
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
CAG G C TC V V+EG E L +D E+ L K + RLACQTTV
Sbjct: 33 CAGLGICQTCYVTVLEGGERLSPLSDVERAFLSEKQIAQGARLACQTTV 81
>gi|448541219|ref|ZP_21624050.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-646]
gi|448549604|ref|ZP_21628209.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-645]
gi|448555284|ref|ZP_21631324.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-644]
gi|445708381|gb|ELZ60221.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-646]
gi|445712652|gb|ELZ64433.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-645]
gi|445718029|gb|ELZ69732.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-644]
Length = 137
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ NC GGG+CGTC V V + +
Sbjct: 2 PTVHFRGREIECNRGDVLRDVLRAAGESPHNGHSSWF-NCRGGGSCGTCAVRV---RGPV 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
RT KE+ + + P + RLACQT V
Sbjct: 58 TYRTKKERRRFRFPPHDPDSGLRLACQTVV 87
>gi|332980823|ref|YP_004462264.1| ferredoxin [Mahella australiensis 50-1 BON]
gi|332698501|gb|AEE95442.1| ferredoxin [Mahella australiensis 50-1 BON]
Length = 98
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
PD A G+ L +I +++ I++ C G G C TC V +G+E L
Sbjct: 8 PDNVTVDAPAGKTLLEIAMDNGIEVR-------HECGGHGMCTTCRCIVQKGRENLSEVN 60
Query: 140 DKEKEKLKRKP-KNWRLACQTTV 161
+KEKEKL K N+RL+CQT V
Sbjct: 61 EKEKEKLGAKVLMNYRLSCQTVV 83
>gi|418703129|ref|ZP_13264019.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410767193|gb|EKR37870.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Hebdomadis str. R499]
Length = 530
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQTTV
Sbjct: 71 FPKSVRLACQTTV 83
>gi|417763551|ref|ZP_12411528.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000624]
gi|417774029|ref|ZP_12421904.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000621]
gi|418675171|ref|ZP_13236463.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000623]
gi|409940370|gb|EKN86010.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000624]
gi|410576500|gb|EKQ39507.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000621]
gi|410577743|gb|EKQ45612.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000623]
Length = 530
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQTTV
Sbjct: 71 FPKSVRLACQTTV 83
>gi|24213884|ref|NP_711365.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. 56601]
gi|45658348|ref|YP_002434.1| adenylate/guanylate cyclase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386073429|ref|YP_005987746.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. IPAV]
gi|417764899|ref|ZP_12412866.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|418667532|ref|ZP_13228943.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|418689760|ref|ZP_13250879.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. FPW2026]
gi|418714343|ref|ZP_13274903.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 08452]
gi|418727743|ref|ZP_13286331.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12621]
gi|421084886|ref|ZP_15545742.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. HAI1594]
gi|421103179|ref|ZP_15563779.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|421122552|ref|ZP_15582835.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. Brem 329]
gi|24194732|gb|AAN48383.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. 56601]
gi|45601591|gb|AAS71071.1| adenylate/guanylate cyclase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353457218|gb|AER01763.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. IPAV]
gi|400353343|gb|EJP05519.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400360949|gb|EJP16918.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. FPW2026]
gi|409959101|gb|EKO22878.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12621]
gi|410344452|gb|EKO95618.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. Brem 329]
gi|410366925|gb|EKP22313.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432836|gb|EKP77191.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. HAI1594]
gi|410756703|gb|EKR18322.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410789286|gb|EKR82988.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 08452]
gi|455790224|gb|EMF42110.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456823161|gb|EMF71631.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Canicola str. LT1962]
gi|456989309|gb|EMG24121.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 530
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQTTV
Sbjct: 71 FPKSVRLACQTTV 83
>gi|417785851|ref|ZP_12433553.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. C10069]
gi|418709690|ref|ZP_13270476.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|409951192|gb|EKO05709.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. C10069]
gi|410769925|gb|EKR45152.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
Length = 530
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQTTV
Sbjct: 71 FPKSVRLACQTTV 83
>gi|417769967|ref|ZP_12417881.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418680324|ref|ZP_13241574.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418700303|ref|ZP_13261245.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418732639|ref|ZP_13290366.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12758]
gi|421114941|ref|ZP_15575355.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|421127525|ref|ZP_15587749.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421134137|ref|ZP_15594279.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|400328038|gb|EJO80277.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409948220|gb|EKN98210.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410013662|gb|EKO71739.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410021875|gb|EKO88658.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410435615|gb|EKP84747.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410760204|gb|EKR26400.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410773419|gb|EKR53447.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12758]
gi|455670009|gb|EMF35063.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 530
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQTTV
Sbjct: 71 FPKSVRLACQTTV 83
>gi|456968653|gb|EMG09823.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 530
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQTTV
Sbjct: 71 FPKSVRLACQTTV 83
>gi|21673484|ref|NP_661549.1| chlorosome envelope protein X [Chlorobium tepidum TLS]
gi|21646590|gb|AAM71891.1| chlorosome envelope protein X [Chlorobium tepidum TLS]
Length = 221
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTP 164
C G C TC V V+EG ELL +D EK L K + R+ACQT + P
Sbjct: 33 CGGNAICQTCYVRVLEGAELLSPMSDAEKAMLSDKLIKEGTRMACQTLIEKP 84
>gi|448615613|ref|ZP_21664376.1| ferredoxin-like protein [Haloferax mediterranei ATCC 33500]
gi|445751744|gb|EMA03175.1| ferredoxin-like protein [Haloferax mediterranei ATCC 33500]
Length = 110
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ L NC G G+CGTC V V + +
Sbjct: 2 PTVHFRGREIECDRGAVLRDVLRGAGEPPHNGHSSWL-NCHGRGSCGTCAVRV---QGPV 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
RT KE +L+ P + RLACQT V G + +++ P + GH
Sbjct: 58 TYRTKKETRRLRLPPHDPDSGLRLACQTLV-----LGDIWVEKYPGFWGHH 103
>gi|282879618|ref|ZP_06288349.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella timonensis
CRIS 5C-B1]
gi|281306566|gb|EFA98595.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella timonensis
CRIS 5C-B1]
Length = 423
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++VIEG G D E+ RK NWRL CQ V
Sbjct: 68 SACGGKGSCGQCKLQVIEGG---GEILDSERPHFSRKEIKNNWRLGCQCKV 115
>gi|399019494|ref|ZP_10721642.1| ferredoxin, 2Fe-2S type, ISC system [Herbaspirillum sp. CF444]
gi|398098104|gb|EJL88397.1| ferredoxin, 2Fe-2S type, ISC system [Herbaspirillum sp. CF444]
Length = 112
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 73 VLLPDGT--PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
V+LP T PD A G+ L D ML+S++D+ C C TC V + E
Sbjct: 5 VILPHPTFCPDGAVIDAPVGKTLCDAMLDSDVDIE-------HACEKSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L TDKE++ L N RL+CQ +G D ++ ++P++
Sbjct: 58 GFDTLDDPTDKEEDLLDMAWGLEANSRLSCQVVLGDDD-----LVVEIPKY 103
>gi|448435984|ref|ZP_21587000.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
gi|445683144|gb|ELZ35547.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
Length = 130
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR ++L++ + Y P R L NC G G C TC V V EG D ++L +
Sbjct: 39 GRNLRRVLLDAGLSPYAPATRRL-NCGGRGLCATCGVRVREGPP-----ADHWHDRLADR 92
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ V P + LV
Sbjct: 93 FGYPRLSCQIAVDRPMTVALV 113
>gi|443669526|ref|ZP_21134738.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa DIANCHI905]
gi|159026274|emb|CAO88850.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330200|gb|ELS44936.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa DIANCHI905]
Length = 110
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR I+L +I LY ++ L NC G G+CGTC V ++ + R EK +L
Sbjct: 16 GENLRRILLKHDISLYNGGSK-LINCRGIGSCGTCAVAIVGEVSAINWR---EKARLSLP 71
Query: 150 PKN----WRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPDNSRRLACQVKV 87
>gi|329942778|ref|ZP_08291557.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydophila
psittaci Cal10]
gi|332287371|ref|YP_004422272.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|384450523|ref|YP_005663123.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|384451525|ref|YP_005664123.1| ferredoxin [Chlamydophila psittaci 01DC11]
gi|384452498|ref|YP_005665095.1| ferredoxin [Chlamydophila psittaci 08DC60]
gi|384453474|ref|YP_005666070.1| ferredoxin [Chlamydophila psittaci C19/98]
gi|384454453|ref|YP_005667048.1| ferredoxin [Chlamydophila psittaci 02DC15]
gi|392376610|ref|YP_004064388.1| ferredoxin, root r-b2 [Chlamydophila psittaci RD1]
gi|406592283|ref|YP_006739463.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci CP3]
gi|406593373|ref|YP_006740552.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci NJ1]
gi|406594250|ref|YP_006741588.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci MN]
gi|407453957|ref|YP_006733065.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci 84/55]
gi|407455267|ref|YP_006734158.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci GR9]
gi|407456650|ref|YP_006735223.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci VS225]
gi|407458001|ref|YP_006736306.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci WS/RT/E30]
gi|407459242|ref|YP_006737345.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci M56]
gi|407460618|ref|YP_006738393.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci WC]
gi|449071081|ref|YP_007438161.1| ferredoxin, root r-b2 [Chlamydophila psittaci Mat116]
gi|313847953|emb|CBY16949.1| ferredoxin, root r-b2 [Chlamydophila psittaci RD1]
gi|325507051|gb|ADZ18689.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|328815038|gb|EGF85027.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydophila
psittaci Cal10]
gi|328914617|gb|AEB55450.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|334692255|gb|AEG85474.1| ferredoxin [Chlamydophila psittaci C19/98]
gi|334693235|gb|AEG86453.1| ferredoxin [Chlamydophila psittaci 01DC11]
gi|334694210|gb|AEG87427.1| ferredoxin [Chlamydophila psittaci 02DC15]
gi|334695187|gb|AEG88403.1| ferredoxin [Chlamydophila psittaci 08DC60]
gi|405780716|gb|AFS19466.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci 84/55]
gi|405781810|gb|AFS20559.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci GR9]
gi|405782682|gb|AFS21430.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci MN]
gi|405783911|gb|AFS22658.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci VS225]
gi|405785250|gb|AFS23996.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci WS/RT/E30]
gi|405785679|gb|AFS24424.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci M56]
gi|405787615|gb|AFS26359.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci WC]
gi|405788155|gb|AFS26898.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci CP3]
gi|405789245|gb|AFS27987.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci NJ1]
gi|449039589|gb|AGE75013.1| ferredoxin, root r-b2 [Chlamydophila psittaci Mat116]
Length = 91
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC++EV+EGKE L + T++EK+ L + N RLACQ +
Sbjct: 39 GVCGTCVIEVVEGKENLSNFTEEEKDFLGDCEDSNERLACQCKI 82
>gi|410858394|ref|YP_006974334.1| ferredoxin, root r-b2 [Chlamydia psittaci 01DC12]
gi|410811289|emb|CCO01935.1| ferredoxin, root r-b2 [Chlamydia psittaci 01DC12]
Length = 91
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC++EV+EGKE L + T++EK+ L + N RLACQ +
Sbjct: 39 GVCGTCVIEVVEGKENLSNFTEEEKDFLGDCEDSNERLACQCKI 82
>gi|435846323|ref|YP_007308573.1| ferredoxin [Natronococcus occultus SP4]
gi|433672591|gb|AGB36783.1| ferredoxin [Natronococcus occultus SP4]
Length = 110
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++L + + + A L NC G GTCGTC VE I+G + T +EK +L
Sbjct: 16 GAILRDVLLEAGLSPHNGRA-ALLNCRGHGTCGTCAVE-IDGP--VSEPTTREKRRLSVP 71
Query: 150 PKN----WRLACQTTV 161
P + RL+CQT V
Sbjct: 72 PHDPDGGLRLSCQTEV 87
>gi|89898388|ref|YP_515498.1| ferredoxin [2Fe-2S] IV [Chlamydophila felis Fe/C-56]
gi|89331760|dbj|BAE81353.1| ferredoxin [2Fe-2S] IV [Chlamydophila felis Fe/C-56]
Length = 91
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC++EV+EG+E L S T++EK+ L + N RLACQ +
Sbjct: 39 GVCGTCVIEVLEGQENLSSFTEEEKDFLGDPEDSNERLACQCKI 82
>gi|307154164|ref|YP_003889548.1| ferredoxin [Cyanothece sp. PCC 7822]
gi|306984392|gb|ADN16273.1| ferredoxin [Cyanothece sp. PCC 7822]
Length = 112
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 14/79 (17%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTD---KEKEKL 146
G LR ++L + LY A+ + NC G G+CGTC VE+ G+ TD KEK +L
Sbjct: 16 GANLRQVLLKHGVALYNGKAKVI-NCLGLGSCGTCAVEI------EGAVTDPNWKEKARL 68
Query: 147 KRKP----KNWRLACQTTV 161
P K RLACQ V
Sbjct: 69 SLPPHSPTKKRRLACQIRV 87
>gi|282877425|ref|ZP_06286248.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella buccalis ATCC
35310]
gi|281300477|gb|EFA92823.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella buccalis ATCC
35310]
Length = 423
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++VIEG G D E+ RK NWRL CQ V
Sbjct: 68 SACGGKGSCGQCRLQVIEGG---GEILDSERPHFTRKEIKNNWRLGCQCKV 115
>gi|336399694|ref|ZP_08580494.1| NADH:ubiquinone oxidoreductase, subunit F [Prevotella
multisaccharivorax DSM 17128]
gi|336069430|gb|EGN58064.1| NADH:ubiquinone oxidoreductase, subunit F [Prevotella
multisaccharivorax DSM 17128]
Length = 422
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++V+EG G D EK RK +WRL CQT V
Sbjct: 67 SACGGKGSCGQCRLQVLEGG---GEILDTEKGHFSRKEIKDHWRLGCQTKV 114
>gi|189347075|ref|YP_001943604.1| ferredoxin [Chlorobium limicola DSM 245]
gi|189341222|gb|ACD90625.1| ferredoxin [Chlorobium limicola DSM 245]
Length = 360
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
C G G C C V V+EG ELL S +D EK L ++ RLACQ T+
Sbjct: 33 CGGHGICQACYVTVLEGNELLSSLSDIEKAFLSPRQIQSGGRLACQATI 81
>gi|166362744|ref|YP_001655017.1| ferredoxin [Microcystis aeruginosa NIES-843]
gi|166085117|dbj|BAF99824.1| ferredoxin [Microcystis aeruginosa NIES-843]
Length = 111
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR I+L +I LY A L NC G G+CGTC V ++ + +EK +L
Sbjct: 16 GENLRRILLKHDISLYNG-ASKLINCRGIGSCGTCAVAIVGEVSAINW---QEKARLSLP 71
Query: 150 P----KNWRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPDNNRRLACQVKV 87
>gi|218245331|ref|YP_002370702.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|257058367|ref|YP_003136255.1| ferredoxin [Cyanothece sp. PCC 8802]
gi|218165809|gb|ACK64546.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|256588533|gb|ACU99419.1| ferredoxin [Cyanothece sp. PCC 8802]
Length = 108
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L I LY A+ NC G G+CGTC VE++ G +D + R+
Sbjct: 16 GANLRRVLLQHGIPLYNHKAK-FINCRGIGSCGTCAVEIV------GEVSDPNWKDTARR 68
Query: 150 P-------KNWRLACQTTV 161
KN RLACQT V
Sbjct: 69 SLPPHSPLKNRRLACQTQV 87
>gi|348590016|ref|YP_004874478.1| ferredoxin, 2Fe-2S [Taylorella asinigenitalis MCE3]
gi|347973920|gb|AEP36455.1| Ferredoxin, 2Fe-2S [Taylorella asinigenitalis MCE3]
gi|399116853|emb|CCG19664.1| ferredoxin [Taylorella asinigenitalis 14/45]
Length = 111
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H LLP+G + A G L +LN+ +D+ C C TC V V+E
Sbjct: 9 HETLLPEG---LVIENAQKGVSLCKNLLNNGVDIEHA-------CEMVCACTTCHVYVVE 58
Query: 131 GKELLGSRTDKEKEKLKR----KPKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L TD E++ L + KP N RL+CQ VG D ++ ++P++
Sbjct: 59 GFDNLNESTDDEEDMLDKAWGLKP-NSRLSCQVVVGDED-----LVVEIPKY 104
>gi|428309797|ref|YP_007120774.1| ferredoxin [Microcoleus sp. PCC 7113]
gi|428251409|gb|AFZ17368.1| ferredoxin [Microcoleus sp. PCC 7113]
Length = 112
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L ++LY A+ + NC G G+CGTC V +EG + DK + L
Sbjct: 16 GSNLRQVLLEHGVELYNGKAK-IINCMGFGSCGTCAV-TVEGDVSEPNWKDKARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
N RLACQT V
Sbjct: 74 SPTANRRLACQTKV 87
>gi|237747462|ref|ZP_04577942.1| ferredoxin protein [Oxalobacter formigenes HOxBLS]
gi|229378813|gb|EEO28904.1| ferredoxin protein [Oxalobacter formigenes HOxBLS]
Length = 112
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H+VL PDG A GQ + D +L+++I + C G C TC V V +
Sbjct: 9 HTVLCPDGAS----FEAPSGQSICDALLDNHIGIE-------HACGKCGACSTCHVIVRK 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDST 167
G + L ++KE++ L R + RL+CQ +G+ D T
Sbjct: 58 GFDSLPEMSEKEEDMLDRAWGLEADSRLSCQARIGSDDLT 97
>gi|448434332|ref|ZP_21586142.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
gi|445685248|gb|ELZ37603.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
Length = 104
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y L NC G G+CG+C V+V EG+ + + KE+ +L
Sbjct: 16 GANLRDVLKEAGLSVYNGKMEQL-NCRGAGSCGSCAVQV-EGE--VSEPSKKERARLWLP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQTTV
Sbjct: 72 PHHPNHDVRLACQTTV 87
>gi|119512495|ref|ZP_01631575.1| hypothetical protein N9414_16761 [Nodularia spumigena CCY9414]
gi|119462845|gb|EAW43802.1| hypothetical protein N9414_16761 [Nodularia spumigena CCY9414]
Length = 112
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G KL ++ ++ IDLY A+ L NC G G+CGTC V+V EG+ + DK + L
Sbjct: 16 GAKLGRVLQHNGIDLYNGGAK-LINCRGIGSCGTCAVKV-EGEVSAANWRDKARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
RLACQT V
Sbjct: 74 SPTAELRLACQTQV 87
>gi|448532951|ref|ZP_21621371.1| ferredoxin [Halorubrum hochstenium ATCC 700873]
gi|445706185|gb|ELZ58070.1| ferredoxin [Halorubrum hochstenium ATCC 700873]
Length = 104
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y L NC G G+CG+C V+V EG+ + + KE+ +L
Sbjct: 16 GANLRDVLKKAGLSVYNGKMEQL-NCRGAGSCGSCAVQV-EGE--VSEPSKKERARLWLP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQTTV
Sbjct: 72 PHHPNHDVRLACQTTV 87
>gi|408793187|ref|ZP_11204797.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408464597|gb|EKJ88322.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 449
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 108 YARPLSN-CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
Y PL + C G C TC V + EG L SR ++E+ RK P RLACQT V
Sbjct: 30 YEYPLYHLCGGNAKCTTCRVFITEGLSHLSSRNEREQTLADRKGWPSEIRLACQTEV 86
>gi|330444434|ref|YP_004377420.1| ferredoxin IV [Chlamydophila pecorum E58]
gi|328807544|gb|AEB41717.1| ferredoxin IV [Chlamydophila pecorum E58]
Length = 91
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKL-KRKPKNWRLACQTTV 161
G CGTC+VEV+EGKE L T+ E++ L + +N RLACQ +
Sbjct: 39 GVCGTCVVEVLEGKENLSEFTEAERDFLGDSEDENERLACQCHI 82
>gi|189346299|ref|YP_001942828.1| ferredoxin [Chlorobium limicola DSM 245]
gi|189340446|gb|ACD89849.1| ferredoxin [Chlorobium limicola DSM 245]
Length = 221
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV-V 171
C G G C TC V+VIEG ELL ++ EK L + + R+AC T + P + ++
Sbjct: 33 CGGNGICQTCYVKVIEGSELLSPISETEKAMLSDRLIEEGTRMACLTNIEKPGTVKILSA 92
Query: 172 IQQLPEW 178
I+++ E
Sbjct: 93 IEEVKEM 99
>gi|421130577|ref|ZP_15590771.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. 2008720114]
gi|410358276|gb|EKP05457.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. 2008720114]
Length = 530
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L + KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPQEPKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQT V
Sbjct: 71 FPKSVRLACQTKV 83
>gi|304382725|ref|ZP_07365216.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
marshii DSM 16973]
gi|304336120|gb|EFM02365.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
marshii DSM 16973]
Length = 422
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C V VIEG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKGSCGQCKVRVIEGG---GEILDSERSHFTRKEVKDHWRLGCQCKV 114
>gi|448318738|ref|ZP_21508251.1| ferredoxin [Natronococcus jeotgali DSM 18795]
gi|445598059|gb|ELY52126.1| ferredoxin [Natronococcus jeotgali DSM 18795]
Length = 110
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++L + + + A L NC G GTCGTC VE I+G T +E+ +L
Sbjct: 16 GSILRDVLLEAGLSPHNGRA-ALLNCRGHGTCGTCAVE-IDGP--ASEPTSRERRRLSAP 71
Query: 150 PKN----WRLACQTTV 161
P + RL+CQT V
Sbjct: 72 PHDPDAGLRLSCQTEV 87
>gi|163845952|ref|YP_001633996.1| ferredoxin [Chloroflexus aurantiacus J-10-fl]
gi|222523677|ref|YP_002568147.1| ferredoxin [Chloroflexus sp. Y-400-fl]
gi|163667241|gb|ABY33607.1| ferredoxin [Chloroflexus aurantiacus J-10-fl]
gi|222447556|gb|ACM51822.1| ferredoxin [Chloroflexus sp. Y-400-fl]
Length = 203
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
C G G C TC V V+ G E L D+EK L R + WRL CQ +V
Sbjct: 34 CDGTGFCQTCKVRVLAGAEFLSPPNDREKNWLPDARLQEGWRLGCQASV 82
>gi|374629303|ref|ZP_09701688.1| ferredoxin [Methanoplanus limicola DSM 2279]
gi|373907416|gb|EHQ35520.1| ferredoxin [Methanoplanus limicola DSM 2279]
Length = 612
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP-- 150
L ++ LN N+ L G C G GTCG C V++I L T E+EKL
Sbjct: 26 LLELALNGNVSLRG-------ECGGAGTCGKCRVQIIRHYGSLNELTRTEEEKLSDDEIK 78
Query: 151 KNWRLACQTTV 161
+RLACQ +
Sbjct: 79 DGYRLACQAKI 89
>gi|434385330|ref|YP_007095941.1| ferredoxin [Chamaesiphon minutus PCC 6605]
gi|428016320|gb|AFY92414.1| ferredoxin [Chamaesiphon minutus PCC 6605]
Length = 118
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+ +L +IDLY A+ + NC G G CGTC+V+V EG + + + L
Sbjct: 16 GTNLREALLAQDIDLYNAGAK-IFNCHGHGICGTCLVQV-EGSVSVPTAAETRPTLLHPH 73
Query: 150 PKN--WRLACQTTV 161
+ RLACQT V
Sbjct: 74 VNDNKRRLACQTKV 87
>gi|300727041|ref|ZP_07060460.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bryantii B14]
gi|299775585|gb|EFI72176.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bryantii B14]
Length = 422
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTVGTPDSTGLV 170
S C G G+CG C +V+EG G D EK RK +WRL CQT V S +
Sbjct: 67 SACGGKGSCGQCRCQVLEGG---GEILDTEKGHFTRKEIKDHWRLGCQTKVKNDLSIKVS 123
Query: 171 -VIQQLPEWK 179
I + EW+
Sbjct: 124 DAILNVKEWE 133
>gi|422005047|ref|ZP_16352250.1| adenylate/guanylate cyclase [Leptospira santarosai serovar Shermani
str. LT 821]
gi|417256260|gb|EKT85692.1| adenylate/guanylate cyclase [Leptospira santarosai serovar Shermani
str. LT 821]
Length = 536
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
++NF + LPDG+P + L +I L + I P +N C G C
Sbjct: 3 LINFENEKEISLPDGSPP---------RSLLEISLANGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQT V
Sbjct: 46 TCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQTKV 86
>gi|415905208|ref|ZP_11552477.1| Ferredoxin, 2Fe-2S type [Herbaspirillum frisingense GSF30]
gi|407763396|gb|EKF72070.1| Ferredoxin, 2Fe-2S type [Herbaspirillum frisingense GSF30]
Length = 112
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H VL P+G+ A G+ L D +L+S+ID+ C C TC V + E
Sbjct: 9 HPVLCPEGS----VIDAPAGKTLCDALLDSDIDIE-------HACEKSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDST 167
G L TDKE++ L RL+CQ +G D T
Sbjct: 58 GFNSLDDPTDKEEDLLDMAWGLEATSRLSCQVVLGEEDLT 97
>gi|421111685|ref|ZP_15572158.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. JET]
gi|410802881|gb|EKS09026.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. JET]
Length = 536
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
++NF + LPDG+P + L +I L + I P +N C G C
Sbjct: 3 LINFENEKEISLPDGSPP---------RSLLEISLANGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQT V
Sbjct: 46 TCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQTKV 86
>gi|237747550|ref|ZP_04578030.1| ferredoxin protein [Oxalobacter formigenes OXCC13]
gi|229378912|gb|EEO29003.1| ferredoxin protein [Oxalobacter formigenes OXCC13]
Length = 111
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 14/100 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H+VL PDG DI A G + D +L+++I++ C G C TC V V +
Sbjct: 9 HAVLCPDGA-DI---DAPEGTSICDALLDNHIEIE-------HACGKCGACSTCHVIVKK 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDST 167
G + L ++KE++ L R RL+CQ VG D T
Sbjct: 58 GYDSLSEMSEKEEDMLDRAWGLTAESRLSCQAKVGDEDLT 97
>gi|410449695|ref|ZP_11303748.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
sp. Fiocruz LV3954]
gi|410016452|gb|EKO78531.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
sp. Fiocruz LV3954]
gi|456873785|gb|EMF89131.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. ST188]
Length = 536
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
++NF + LPDG+P + L +I L + I P +N C G C
Sbjct: 3 LINFENEKEISLPDGSPP---------RSLLEISLANGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQT V
Sbjct: 46 TCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQTKV 86
>gi|359685274|ref|ZP_09255275.1| adenylate/guanylate cyclase [Leptospira santarosai str. 2000030832]
Length = 536
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
++NF + LPDG+P + L +I L + I P +N C G C
Sbjct: 3 LINFENEKEISLPDGSPP---------RSLLEISLANGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQT V
Sbjct: 46 TCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQTKV 86
>gi|359405290|ref|ZP_09198069.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella stercorea DSM
18206]
gi|357559077|gb|EHJ40541.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella stercorea DSM
18206]
Length = 423
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 16/75 (21%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGT------P 164
S C G +CG C V+V+EG G D EK RK NWRL CQ V + P
Sbjct: 68 SACGGKASCGQCKVQVLEGG---GEILDSEKPHFTRKQIKDNWRLGCQCKVKSDMKIKVP 124
Query: 165 DSTGLVVIQQLPEWK 179
DS + + EW+
Sbjct: 125 DS-----VMGVKEWE 134
>gi|255034221|ref|YP_003084842.1| ferredoxin [Dyadobacter fermentans DSM 18053]
gi|254946977|gb|ACT91677.1| ferredoxin [Dyadobacter fermentans DSM 18053]
Length = 107
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDSTGL 169
+ C G C TC +EV+EGKE L D+E + L P N RL+CQ +P GL
Sbjct: 39 ATCGGMALCATCHIEVLEGKENLPESNDQELDTLDTLPNADANSRLSCQLR-PSPAMDGL 97
Query: 170 V 170
V
Sbjct: 98 V 98
>gi|149922427|ref|ZP_01910860.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
gi|149816707|gb|EDM76198.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
Length = 798
Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
+A G L D+ LN+ I P+ C G C TC V V++G++ L R E+
Sbjct: 382 SAPEGDTLLDVSLNAGI----PH---FHACGGNARCSTCRVVVLQGRDNLSPRPPLEQRI 434
Query: 146 LKRK--PKNWRLACQTTVGTP 164
+R+ P + RLACQ V P
Sbjct: 435 AERRQWPASTRLACQARVLGP 455
>gi|425470246|ref|ZP_18849116.1| Ferredoxin [Microcystis aeruginosa PCC 9701]
gi|389884166|emb|CCI35497.1| Ferredoxin [Microcystis aeruginosa PCC 9701]
Length = 112
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR I+L +I LY ++ L NC G G+CGTC V ++ + +EK +L
Sbjct: 16 GENLRRILLKHDISLYNGGSK-LINCRGIGSCGTCAVAIVGEVSAINW---QEKARLSLP 71
Query: 150 P----KNWRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPDNNRRLACQVKV 87
>gi|334119774|ref|ZP_08493858.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333457415|gb|EGK86038.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 351
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKE---KLKRKPKNWRLACQTTVGTPDSTGLVV 171
C G C TC V V+EG E RT E+E KL+ +P+ RLACQT V + G V+
Sbjct: 36 CGGSARCSTCRVLVVEGLEFCSPRTSPEEELAKKLRLEPE-IRLACQTQV----AGGKVI 90
Query: 172 IQQL 175
+++L
Sbjct: 91 LRRL 94
>gi|194333970|ref|YP_002015830.1| ferredoxin [Prosthecochloris aestuarii DSM 271]
gi|194311788|gb|ACF46183.1| ferredoxin [Prosthecochloris aestuarii DSM 271]
Length = 356
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C G G C TC V V+EG++ L +D E+ L K RLACQTT+
Sbjct: 33 CGGHGVCQTCYVTVLEGEDCLSDLSDIERAFLSEKQIAGGGRLACQTTI 81
>gi|193212320|ref|YP_001998273.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
gi|193085797|gb|ACF11073.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
Length = 222
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
C G C TC V+++EG ELL +D EK L + R+ACQ T+ P L+
Sbjct: 33 CGGNAICQTCYVKILEGAELLSPMSDAEKAMLSDTLVKEGTRMACQATIEKPGKITLL 90
>gi|94499519|ref|ZP_01306056.1| Na(+)-translocating NADH-quinone reductase subunit F [Bermanella
marisrubri]
gi|94428273|gb|EAT13246.1| Na(+)-translocating NADH-quinone reductase subunit F [Oceanobacter
sp. RED65]
Length = 411
Score = 43.5 bits (101), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ +T GG KL + + N+ + L S C GGGTC C ++ EG G
Sbjct: 43 NGDPEKTIKTQAGG-KLLNTLANNGVFLS-------SACGGGGTCAQCSCQIFEGG---G 91
Query: 137 SRTDKEKEKLKRKP--KNWRLACQTTV 161
S E+ ++ + WRL+CQ V
Sbjct: 92 SMLPTEESHFTKRDAREGWRLSCQVPV 118
>gi|313126725|ref|YP_004036995.1| hypothetical protein Hbor_19840 [Halogeometricum borinquense DSM
11551]
gi|448288810|ref|ZP_21480008.1| hypothetical protein C499_18504 [Halogeometricum borinquense DSM
11551]
gi|312293090|gb|ADQ67550.1| uncharacterized metal-binding protein [Halogeometricum borinquense
DSM 11551]
gi|445569195|gb|ELY23770.1| hypothetical protein C499_18504 [Halogeometricum borinquense DSM
11551]
Length = 120
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 17/109 (15%)
Query: 80 PDIHFRTA---CG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P + FR + C G LRD++L + + A L NC G GTCGTC V +EG +
Sbjct: 2 PTVQFRDSEIQCERGAVLRDVLLAAGESPHNGSADML-NCRGRGTCGTCAV-AVEGA--V 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTVGTPDSTGLVVIQQLPEWKG 180
RT +E+ +L P + RL+CQT V G V +++ P + G
Sbjct: 58 TDRTKREETRLSFPPHHPDSGLRLSCQTRV-----LGDVTVEKHPGFWG 101
>gi|390940151|ref|YP_006403888.1| ferredoxin [Sulfurospirillum barnesii SES-3]
gi|390193258|gb|AFL68313.1| ferredoxin [Sulfurospirillum barnesii SES-3]
Length = 98
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRK-----PKNWRLACQTTVGTPDST 167
G CGTC+VE+++G E L +KE + LK KN RLACQ + P+
Sbjct: 40 GQCGTCVVEIVQGMEFLSPINEKEVKVLKEICVGTCSKNSRLACQMKIDKPNGV 93
>gi|448612925|ref|ZP_21662805.1| ferredoxin-like protein [Haloferax mucosum ATCC BAA-1512]
gi|445739822|gb|ELZ91328.1| ferredoxin-like protein [Haloferax mucosum ATCC BAA-1512]
Length = 156
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 17/110 (15%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ ++ + + NC G G+CGTC V I G +
Sbjct: 2 PTVHFRGREIECDRGDVLRDVLRAADESPHNGRSSWF-NCLGRGSCGTCAV-CIRGP--V 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGH 181
RT KE ++L+ P + RLACQT V G + +++ P + GH
Sbjct: 58 TYRTKKETQRLRFPPHDAESGLRLACQTLV-----LGDIWVEKYPGFWGH 102
>gi|329904116|ref|ZP_08273682.1| Ferredoxin, 2Fe-2S [Oxalobacteraceae bacterium IMCC9480]
gi|327548138|gb|EGF32854.1| Ferredoxin, 2Fe-2S [Oxalobacteraceae bacterium IMCC9480]
Length = 112
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H VL P+G A G+ L D++L+S+ID+ C C TC + + E
Sbjct: 9 HPVLCPEGA----VIDAPKGKSLCDVLLDSDIDIE-------HACEKSCACTTCHIVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPD 165
G LG +KE++ L N RL+CQ VG D
Sbjct: 58 GFRSLGEPGEKEEDLLDMAWGLEANSRLSCQALVGDVD 95
>gi|78186757|ref|YP_374800.1| chlorosome envelope protein I [Chlorobium luteolum DSM 273]
gi|78166659|gb|ABB23757.1| chlorosome envelope protein I [Chlorobium luteolum DSM 273]
Length = 218
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQTTVGTPDSTGLVVI 172
CAG G C TC V V EG E L +D EK L + N R+ACQ + + G V I
Sbjct: 33 CAGNGVCQTCYVTVEEGAECLSPLSDVEKAFLSERQINAGGRMACQAVL---EKEGTVTI 89
Query: 173 QQLPE 177
PE
Sbjct: 90 LSRPE 94
>gi|226315120|ref|YP_002775016.1| hypothetical protein BBR47_55350 [Brevibacillus brevis NBRC 100599]
gi|226098070|dbj|BAH46512.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
Length = 136
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 109 ARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK-PKNWRLACQTT 160
A+P++ G CG C V+++ G LL + T +EK KL K +RLACQ+T
Sbjct: 77 AQPIAYKCQQGHCGKCSVQIVAGASLLDTPTGQEKAKLGEKLATGYRLACQST 129
>gi|92113698|ref|YP_573626.1| Na(+)-translocating NADH-quinone reductase subunit F
[Chromohalobacter salexigens DSM 3043]
gi|91796788|gb|ABE58927.1| NADH:ubiquinone oxidoreductase, subunit F [Chromohalobacter
salexigens DSM 3043]
Length = 410
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G PD T GG+ L+ + N G + S C GGG+C C V++G G
Sbjct: 43 NGDPDNTLTTQAGGKLLQTLAAN------GIFLS--SACGGGGSCAQCRCRVVDGG---G 91
Query: 137 SR--TDKEKEKLKRKPKNWRLACQTTV 161
S T++ L+ K + WRL+CQ V
Sbjct: 92 SILPTEESHFTLREKKEGWRLSCQVPV 118
>gi|159898027|ref|YP_001544274.1| guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
gi|159891066|gb|ABX04146.1| adenylate/guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
Length = 561
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQT 159
+C G G C TC +E+IEG + L T+ E LKR + RLACQT
Sbjct: 286 SCGGRGRCSTCRIEIIEGVKALNPPTETELRLLKRFGASGDIRLACQT 333
>gi|261419133|ref|YP_003252815.1| ferredoxin [Geobacillus sp. Y412MC61]
gi|319765950|ref|YP_004131451.1| ferredoxin [Geobacillus sp. Y412MC52]
gi|261375590|gb|ACX78333.1| ferredoxin [Geobacillus sp. Y412MC61]
gi|317110816|gb|ADU93308.1| ferredoxin [Geobacillus sp. Y412MC52]
Length = 117
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
GTCG CMV V+ G LL +T +E+EK + K RLACQ +
Sbjct: 76 GTCGRCMVTVLAGAHLLAPKTRREREKTDQPAK--RLACQAQI 116
>gi|56419449|ref|YP_146767.1| hypothetical protein GK0914 [Geobacillus kaustophilus HTA426]
gi|375007869|ref|YP_004981502.1| Ferredoxin [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56379291|dbj|BAD75199.1| hypothetical protein GK0914 [Geobacillus kaustophilus HTA426]
gi|359286718|gb|AEV18402.1| Ferredoxin [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 117
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
GTCG CMV V+ G LL +T +E+EK + K RLACQ +
Sbjct: 76 GTCGRCMVTVLAGAHLLAPKTRREREKTDQPAK--RLACQAQI 116
>gi|387813797|ref|YP_005429280.1| Na(+)-translocating NADH-quinone reductase subunit F
(Na(+)-translocating NADH-quinone reductase subunit
beta) (Na(+)-translocating NQR subunit F) (Na(+)-NQR
subunit F) (NQR complex subunit F) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338810|emb|CCG94857.1| Na(+)-translocating NADH-quinone reductase subunit F
(Na(+)-translocating NADH-quinone reductase subunit
beta) (Na(+)-translocating NQR subunit F) (Na(+)-NQR
subunit F) (NQR complex subunit F) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 408
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ +TA GG KL + NS I L S C GGGTC C +V++G G+
Sbjct: 44 PEHTLKTAAGG-KLLGTLANSGIYLS-------SACGGGGTCAQCKCKVLDGG---GAML 92
Query: 140 DKEKEKL--KRKPKNWRLACQTTV 161
EK + + + WRL+CQ V
Sbjct: 93 PTEKTHFTNREEKEGWRLSCQVPV 116
>gi|332709534|ref|ZP_08429495.1| ferredoxin [Moorea producens 3L]
gi|332351793|gb|EGJ31372.1| ferredoxin [Moorea producens 3L]
Length = 110
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L + LY A+ + NC G G+CGTC VE ++G+ + DK + L
Sbjct: 16 GSNLRKVLLEHGVALYNGNAKVI-NCRGLGSCGTCAVE-LDGEVSEPNWKDKARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
N RLACQT V
Sbjct: 74 SPTANRRLACQTKV 87
>gi|134022758|gb|ABO45325.1| NqrF [Marinobacter hydrocarbonoclasticus]
Length = 408
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ +TA GG KL + NS I L S C GGGTC C +V++G G+
Sbjct: 44 PEHTLKTAAGG-KLLGTLANSGIYLS-------SACGGGGTCAQCKCKVLDGG---GAML 92
Query: 140 DKEKEKL--KRKPKNWRLACQTTV 161
EK + + + WRL+CQ V
Sbjct: 93 PTEKTHFTNREEKEGWRLSCQVPV 116
>gi|37521090|ref|NP_924467.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421]
gi|35212086|dbj|BAC89462.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421]
Length = 115
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 90 GQKLRDIMLNSNIDLY-GPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR 148
G LR +L N+ LY GP + L NC G GTCGTC V + G R EK +L
Sbjct: 16 GANLRQFLLEQNVPLYNGPSS--LINCHGLGTCGTCAVGIAGPVSEPGGR---EKFRLGL 70
Query: 149 KPKNW-----RLACQTTV 161
P RLACQ TV
Sbjct: 71 PPHKGVEGGRRLACQVTV 88
>gi|120554843|ref|YP_959194.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
aquaeolei VT8]
gi|120324692|gb|ABM19007.1| NADH:ubiquinone oxidoreductase, subunit F [Marinobacter aquaeolei
VT8]
Length = 408
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ +TA GG KL + NS I L S C GGGTC C +V++G G+
Sbjct: 44 PEHTLKTAAGG-KLLGTLANSGIYLS-------SACGGGGTCAQCKCKVLDGG---GAML 92
Query: 140 DKEKEKL--KRKPKNWRLACQTTV 161
EK + + + WRL+CQ V
Sbjct: 93 PTEKTHFTNREEKEGWRLSCQVPV 116
>gi|448319823|ref|ZP_21509311.1| ferredoxin I 4 [Natronococcus amylolyticus DSM 10524]
gi|445606229|gb|ELY60133.1| ferredoxin I 4 [Natronococcus amylolyticus DSM 10524]
Length = 110
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD+++ + + + + L NC G GTCGTC VE I+G T++EK +L
Sbjct: 16 GAILRDVLVEAGLSPHNGRS-ALLNCRGHGTCGTCAVE-IDGS--TSEPTNREKRRLSVP 71
Query: 150 PKN----WRLACQTTV 161
P + RL+CQT V
Sbjct: 72 PHDSDSGLRLSCQTEV 87
>gi|399046770|ref|ZP_10739002.1| ferredoxin [Brevibacillus sp. CF112]
gi|398055158|gb|EJL47245.1| ferredoxin [Brevibacillus sp. CF112]
Length = 141
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 110 RPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK-PKNWRLACQTT 160
+PLS G CG C V V+ G LL + T +E EKL +K +RLACQ+T
Sbjct: 83 QPLSYKCRQGYCGKCRVLVVSGTSLLDAPTKQESEKLDQKLASGYRLACQST 134
>gi|433544059|ref|ZP_20500453.1| hypothetical protein D478_10165 [Brevibacillus agri BAB-2500]
gi|432184665|gb|ELK42172.1| hypothetical protein D478_10165 [Brevibacillus agri BAB-2500]
Length = 141
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 110 RPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK-PKNWRLACQTT 160
+PLS G CG C V V+ G LL + T +E EKL +K +RLACQ+T
Sbjct: 83 QPLSYKCRQGYCGKCRVLVVSGTSLLDAPTKQESEKLDQKLASGYRLACQST 134
>gi|255533100|ref|YP_003093472.1| ferredoxin [Pedobacter heparinus DSM 2366]
gi|255346084|gb|ACU05410.1| ferredoxin [Pedobacter heparinus DSM 2366]
Length = 110
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 12/96 (12%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR 148
GG+ + D+ L+ I+L NC G C TC V V G + + +DKE++ + R
Sbjct: 24 GGESVLDVCLDHGIELQ-------HNCGGVCGCSTCHVYVTRGMDDIQEISDKEEDFIDR 76
Query: 149 --KPK-NWRLACQTTVGTPDSTGLVVIQQLPEWKGH 181
+PK + RL CQ V + D V I E+ GH
Sbjct: 77 AVRPKISSRLGCQCVVISGDIE--VTIPDQSEFLGH 110
>gi|330995712|ref|ZP_08319610.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella
xylaniphila YIT 11841]
gi|329574771|gb|EGG56332.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella
xylaniphila YIT 11841]
Length = 422
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G G+CG C +V+EG G D EK + RK +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGG---GEILDSEKGQFTRKQIKDHWRLGCQCKV 115
>gi|270340101|ref|ZP_06007039.2| NADH:ubiquinone oxidoreductase subunit F [Prevotella bergensis DSM
17361]
gi|270332653|gb|EFA43439.1| NADH:ubiquinone oxidoreductase subunit F [Prevotella bergensis DSM
17361]
Length = 421
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G G+C C +V+EG G D EK RK ++WRL CQT V
Sbjct: 66 SACGGKGSCAQCKCQVLEGG---GEILDSEKSHFTRKQIKEHWRLGCQTKV 113
>gi|422304726|ref|ZP_16392066.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790035|emb|CCI13998.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 110
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR I+L +I LY ++ L NC G G+CGTC V ++ + +EK +L
Sbjct: 16 GANLRRILLKHDISLYNGGSK-LINCRGIGSCGTCAVAIVGEVSAINW---QEKARLSLP 71
Query: 150 P----KNWRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPNNNRRLACQVKV 87
>gi|332876778|ref|ZP_08444536.1| NADH:ubiquinone oxidoreductase, F subunit [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|357047378|ref|ZP_09108985.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella clara YIT
11840]
gi|332685337|gb|EGJ58176.1| NADH:ubiquinone oxidoreductase, F subunit [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|355529979|gb|EHG99404.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella clara YIT
11840]
Length = 422
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G G+CG C +V+EG G D EK + RK +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGG---GEILDSEKGQFTRKQIKDHWRLGCQCKV 115
>gi|110668446|ref|YP_658257.1| ferredoxin [Haloquadratum walsbyi DSM 16790]
gi|109626193|emb|CAJ52649.1| ferredoxin (2Fe-2S) [Haloquadratum walsbyi DSM 16790]
Length = 156
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 29/122 (23%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV----------------I 129
T G LRD + N + YG + L NC G G C TC V V I
Sbjct: 24 TVSIGTNLRDALRNHDFSPYGRLSETL-NCGGNGLCATCGVRVRVYNNQQNDIADTQIHI 82
Query: 130 EGKELL----GSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPE---WKGHE 182
+ +++ G D ++L + RL+CQ TV P +V+Q LP+ W G +
Sbjct: 83 DDNDIMYPDSGPTPDHWHDRLAARFGYPRLSCQITVSEP-----LVVQLLPKKLLWGGRK 137
Query: 183 WK 184
K
Sbjct: 138 TK 139
>gi|113460432|ref|YP_718494.1| ferredoxin [Haemophilus somnus 129PT]
gi|170717851|ref|YP_001783512.1| 2Fe-2S type ferredoxin [Haemophilus somnus 2336]
gi|112822475|gb|ABI24564.1| ferredoxin [Haemophilus somnus 129PT]
gi|168825980|gb|ACA31351.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus somnus 2336]
Length = 113
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 73 VLLP--DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
V LP D P+ A G+ L D+ N+ ++++ C G C TC V + E
Sbjct: 5 VFLPHQDFCPEGMVVDAAPGENLLDVAHNAGVEIHHA-------CDGSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPD 165
G + L T++E++ L + + RL+CQ VG D
Sbjct: 58 GFDSLNETTEQEEDMLDKAWGLEMDSRLSCQCVVGEED 95
>gi|428319817|ref|YP_007117699.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428243497|gb|AFZ09283.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 351
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKE---KLKRKPKNWRLACQTTVGTPDSTGLVV 171
C G C TC V ++EG E RT E+E KL+ +P+ RLACQT V + G V+
Sbjct: 36 CGGSARCSTCRVLIVEGLEFCSPRTSPEEELAKKLRLEPE-IRLACQTQV----AGGKVI 90
Query: 172 IQQL 175
+++L
Sbjct: 91 LRRL 94
>gi|307566471|ref|ZP_07628903.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella amnii CRIS
21A-A]
gi|307344815|gb|EFN90220.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella amnii CRIS
21A-A]
Length = 421
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C +VIEG G D E+ RK +NWRL CQ V
Sbjct: 66 SACGGKASCGQCKCQVIEGG---GEILDSERPHFSRKEIKENWRLGCQAKV 113
>gi|398338583|ref|ZP_10523286.1| adenylate/guanylate cyclase [Leptospira kirschneri serovar Bim str.
1051]
gi|418675965|ref|ZP_13237251.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|418686182|ref|ZP_13247351.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418739182|ref|ZP_13295570.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|400323730|gb|EJO71578.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|410739136|gb|EKQ83865.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410753434|gb|EKR10399.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 530
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEPKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQT V
Sbjct: 71 FPKSVRLACQTKV 83
>gi|427401516|ref|ZP_18892588.1| 2Fe-2S ferredoxin [Massilia timonae CCUG 45783]
gi|425719625|gb|EKU82557.1| 2Fe-2S ferredoxin [Massilia timonae CCUG 45783]
Length = 113
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H V PDG A G+ + D++L+++I++ R CA C TC V V E
Sbjct: 9 HPVFCPDGA----VLEAPAGKSVCDVLLDNDIEIEHACDRV---CA----CTTCHVIVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPD 165
G E L + +KE++ L + N RL+CQ V D
Sbjct: 58 GFESLNEQEEKEEDMLDKAWGLEPNSRLSCQAIVAEED 95
>gi|373501032|ref|ZP_09591400.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella micans F0438]
gi|371950884|gb|EHO68736.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella micans F0438]
Length = 422
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C +++IEG G D E+ RK +WRL+CQ V
Sbjct: 67 SACGGKGSCGQCRLQIIEGG---GEILDSERPHFTRKEIKNHWRLSCQCKV 114
>gi|418696626|ref|ZP_13257632.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. H1]
gi|421107093|ref|ZP_15567652.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. H2]
gi|409955548|gb|EKO14483.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. H1]
gi|410007865|gb|EKO61545.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. H2]
Length = 530
Score = 42.7 bits (99), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEPKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQT V
Sbjct: 71 FPKSVRLACQTKV 83
>gi|374581506|ref|ZP_09654600.1| putative metal-binding protein [Desulfosporosinus youngiae DSM
17734]
gi|374417588|gb|EHQ90023.1| putative metal-binding protein [Desulfosporosinus youngiae DSM
17734]
Length = 636
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G GTCG C VE+I G ++ + E+L K RLAC+T+V
Sbjct: 36 SGCGGKGTCGACKVEIISGDPIVNGTGNLTPEQLS---KGIRLACKTSV 81
>gi|451980870|ref|ZP_21929255.1| Iron-sulfur cluster-binding protein [Nitrospina gracilis 3/211]
gi|451761992|emb|CCQ90498.1| Iron-sulfur cluster-binding protein [Nitrospina gracilis 3/211]
Length = 99
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR- 148
G LR+ + + I +Y + L NC G G C +C VE+ G + R + E+ LK+
Sbjct: 18 GTNLREAAIANKIGIYQHIFKIL-NCRGRGLCSSCRVEITSGN--VAPRNEVEENNLKKA 74
Query: 149 --KPKNWRLACQTTV 161
K N RLACQ V
Sbjct: 75 LTKNPNLRLACQIKV 89
>gi|288799900|ref|ZP_06405359.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. oral taxon 299 str. F0039]
gi|288333148|gb|EFC71627.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. oral taxon 299 str. F0039]
Length = 423
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C ++V+EG G D E+ RK NWRL CQ V
Sbjct: 68 SACGGKASCGQCKLQVVEGG---GEILDSERSHFTRKEIKDNWRLGCQCKV 115
>gi|116050997|ref|YP_790178.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa UCBPP-PA14]
gi|296388511|ref|ZP_06877986.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAb1]
gi|313108284|ref|ZP_07794316.1| Na+-translocating NADH:quinone oxidoreductase, subunit 6
[Pseudomonas aeruginosa 39016]
gi|355641271|ref|ZP_09052156.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas sp. 2_1_26]
gi|386067026|ref|YP_005982330.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa NCGM2.S1]
gi|421166858|ref|ZP_15625079.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 700888]
gi|421173808|ref|ZP_15631545.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CI27]
gi|122260126|sp|Q02PF8.1|NQRF_PSEAB RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|115586218|gb|ABJ12233.1| Na+-translocating NADH:quinone oxidoreductase, subunit 6
[Pseudomonas aeruginosa UCBPP-PA14]
gi|310880818|gb|EFQ39412.1| Na+-translocating NADH:quinone oxidoreductase, subunit 6
[Pseudomonas aeruginosa 39016]
gi|348035585|dbj|BAK90945.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa NCGM2.S1]
gi|354830869|gb|EHF14901.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas sp. 2_1_26]
gi|404535332|gb|EKA45033.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CI27]
gi|404536556|gb|EKA46193.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 700888]
Length = 407
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + +N+ L S C GGGTC C V+EG G E
Sbjct: 45 HSLTVPAGGKLLQTLATNNVFLS-------SACGGGGTCAQCKCVVVEGG---GEMLPTE 94
Query: 143 KEKLKRK--PKNWRLACQTTV 161
+ R+ + WRL+CQT V
Sbjct: 95 ESHFTRRQAKEGWRLSCQTPV 115
>gi|416874125|ref|ZP_11917935.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 152504]
gi|334843764|gb|EGM22348.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 152504]
Length = 407
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + +N+ L S C GGGTC C V+EG G E
Sbjct: 45 HSLTVPAGGKLLQTLATNNVFLS-------SACGGGGTCAQCKCVVVEGG---GEMLPTE 94
Query: 143 KEKLKRK--PKNWRLACQTTV 161
+ R+ + WRL+CQT V
Sbjct: 95 ESHFTRRQAKEGWRLSCQTPV 115
>gi|119505781|ref|ZP_01627849.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2080]
gi|119458415|gb|EAW39522.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2080]
Length = 407
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 12/74 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G KL + ++N+ L S C GGGTC C +V +G GS E+ R+
Sbjct: 51 GGKLLQTLADANLFL-------ASACGGGGTCAQCKCQVSDGG---GSMLPTEESHFTRR 100
Query: 150 PKN--WRLACQTTV 161
N WRL+CQT V
Sbjct: 101 QANDGWRLSCQTPV 114
>gi|410460414|ref|ZP_11314093.1| ferredoxin [Bacillus azotoformans LMG 9581]
gi|409927217|gb|EKN64361.1| ferredoxin [Bacillus azotoformans LMG 9581]
Length = 116
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNI-DLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSR 138
P I++ T+ K ++ NSNI + Y L N GGG CG+C+ +V +G E L +
Sbjct: 2 PKINYVTS---GKTFEVPENSNILRMSLRYDGDLPNRCGGGLCGSCVCKVEKGAEFLDNV 58
Query: 139 TDKEKEKLKRK--PKNWRLACQTTVGTPD 165
+E+ KL + + +RL CQT V D
Sbjct: 59 KKQERRKLGDELLSQGYRLGCQTFVNGGD 87
>gi|358450753|ref|ZP_09161204.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
manganoxydans MnI7-9]
gi|357225049|gb|EHJ03563.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
manganoxydans MnI7-9]
Length = 408
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ +T GG KL + NS I L S C GGGTC C +V+EG G+
Sbjct: 44 PEHTLKTEAGG-KLLGTLANSGIFLS-------SACGGGGTCAQCKCKVLEGG---GAML 92
Query: 140 DKEKEKL--KRKPKNWRLACQTTV 161
EK + + + WRL+CQ V
Sbjct: 93 PTEKTHFTNREEKEGWRLSCQVPV 116
>gi|425460122|ref|ZP_18839604.1| Ferredoxin [Microcystis aeruginosa PCC 9808]
gi|389827233|emb|CCI21661.1| Ferredoxin [Microcystis aeruginosa PCC 9808]
Length = 110
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR I+L +I Y A L NC G G+CGTC V ++ + +EK +L
Sbjct: 16 GENLRRILLKHDISSYNG-ASKLINCRGIGSCGTCAVAIVGEVSAINW---QEKARLSLP 71
Query: 150 P----KNWRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPDNNRRLACQVKV 87
>gi|385331989|ref|YP_005885940.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
adhaerens HP15]
gi|311695139|gb|ADP98012.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
adhaerens HP15]
Length = 408
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ +T GG KL + NS I L S C GGGTC C +V+EG G+
Sbjct: 44 PEHTLKTEAGG-KLLGTLANSGIFLS-------SACGGGGTCAQCKCKVLEGG---GAML 92
Query: 140 DKEKEKL--KRKPKNWRLACQTTV 161
EK + + + WRL+CQ V
Sbjct: 93 PTEKTHFTNREEKEGWRLSCQVPV 116
>gi|288932107|ref|YP_003436167.1| ferredoxin [Ferroglobus placidus DSM 10642]
gi|288894355|gb|ADC65892.1| ferredoxin [Ferroglobus placidus DSM 10642]
Length = 630
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-KRKP-KNWRLACQT 159
C G TCG C V + +G+E L T+ E+ L KRK KN+RLAC T
Sbjct: 38 CGGKLTCGKCQVVIEQGEENLSQMTEDERRLLDKRKAGKNYRLACVT 84
>gi|110598534|ref|ZP_01386803.1| Ferredoxin [Chlorobium ferrooxidans DSM 13031]
gi|110339838|gb|EAT58344.1| Ferredoxin [Chlorobium ferrooxidans DSM 13031]
Length = 197
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV-V 171
C G G C TC V V +G ELL +D EK L + R+AC TTV P + +V
Sbjct: 33 CGGNGICQTCYVTVKKGSELLSPISDSEKALLSDTLIKEGTRMACLTTVEKPGTIEIVST 92
Query: 172 IQQLPE 177
++Q+ E
Sbjct: 93 VEQVKE 98
>gi|425466004|ref|ZP_18845307.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389831623|emb|CCI25429.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 110
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L +I LY ++ L NC G G+CGTC V ++ + +EK +L
Sbjct: 16 GANLRRVLLKHDISLYNGGSK-LINCRGIGSCGTCAVAIVGEVSAINW---QEKARLSLP 71
Query: 150 P----KNWRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPDNNRRLACQVKV 87
>gi|345882637|ref|ZP_08834097.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. C561]
gi|345044568|gb|EGW48603.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. C561]
Length = 422
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKGSCGQCKLQVVEGG---GEILDSERPHFSRKEIKDHWRLGCQCKV 114
>gi|383811089|ref|ZP_09966565.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. oral
taxon 306 str. F0472]
gi|383356277|gb|EID33785.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. oral
taxon 306 str. F0472]
Length = 422
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKGSCGQCKLQVVEGG---GEILDSERPHFSRKEVKDHWRLGCQCKV 114
>gi|288802921|ref|ZP_06408358.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella melaninogenica D18]
gi|288334738|gb|EFC73176.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella melaninogenica D18]
Length = 422
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKGSCGQCKLQVVEGG---GEILDSERPHFSRKDVKDHWRLGCQCKV 114
>gi|302346255|ref|YP_003814553.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
melaninogenica ATCC 25845]
gi|302151124|gb|ADK97385.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
melaninogenica ATCC 25845]
Length = 422
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKGSCGQCKLQVVEGG---GEILDSERPHFSRKDVKDHWRLGCQCKV 114
>gi|421091074|ref|ZP_15551857.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. 200802841]
gi|410000178|gb|EKO50849.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
kirschneri str. 200802841]
Length = 530
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNHGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEPKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQT V
Sbjct: 71 FPKSVRLACQTKV 83
>gi|381205734|ref|ZP_09912805.1| 2Fe-2S ferredoxin [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 135
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP---KNWRLACQTTVGTPDSTGLV 170
+C G C TC + V G E T+ E++ L P +N RLACQ PD T V
Sbjct: 63 SCGGVCACSTCHIWVRSGMESCNEATEDEEDMLDMAPGLQQNSRLACQC---VPDGTSDV 119
Query: 171 VIQQLPEWK 179
V+ ++P+W
Sbjct: 120 VV-EIPDWN 127
>gi|114565975|ref|YP_753129.1| hypothetical protein Swol_0420 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336910|gb|ABI67758.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 610
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 77 DGTPDIHFRTACGG--QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKEL 134
DG +H + G Q L D++ ++ I+L S+CAG GTCG C V +I G+ L
Sbjct: 6 DGLSGVHVVCSSNGEIQLLMDLLDDTGIELE-------SSCAGNGTCGKCRVLIISGECL 58
Query: 135 LGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ E K + RLAC V
Sbjct: 59 PPGTAEMELLSPKDFKRGIRLACHCLV 85
>gi|428166951|gb|EKX35918.1| hypothetical protein GUITHDRAFT_160176 [Guillardia theta CCMP2712]
Length = 158
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN 152
LRD ML +DLY L NC GGG CGTC V+++ G L RT E++ LK P +
Sbjct: 80 LRDAMLAGKVDLYYTMKGKLFNCGGGGNCGTCKVDLVSGN--LSPRTAAEEKLLKGCPPS 137
Query: 153 WRLACQTTV 161
+RLACQ+ V
Sbjct: 138 FRLACQSCV 146
>gi|296444626|ref|ZP_06886590.1| ferredoxin [Methylosinus trichosporium OB3b]
gi|296257894|gb|EFH04957.1| ferredoxin [Methylosinus trichosporium OB3b]
Length = 101
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR---KPKNWRLACQTTVGTPDST 167
+S C+G CGTC V V EGK+ + T E E+L RLACQT GT + T
Sbjct: 33 MSKCSGEAKCGTCHVFVQEGKKSMSKATRAENERLDSIVGVGSKSRLACQTNFGTENVT 91
>gi|326800365|ref|YP_004318184.1| ferredoxin [Sphingobacterium sp. 21]
gi|326551129|gb|ADZ79514.1| ferredoxin [Sphingobacterium sp. 21]
Length = 106
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP---KNWRLACQ 158
L+ C G C TC VEV+ G E L +D E L P +N RLACQ
Sbjct: 38 LATCGGMALCATCHVEVLSGMERLHEASDDELNMLDTLPDADENSRLACQ 87
>gi|344213223|ref|YP_004797543.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula hispanica ATCC 33960]
gi|343784578|gb|AEM58555.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula hispanica ATCC 33960]
Length = 111
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 81 DIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTD 140
+ H TA G LRD++L++++ +G YA+ + NC G G C TC V + E + D
Sbjct: 13 ETHELTAERGAVLRDVLLDADLSPHGRYAKRV-NCGGRGICATCGVRLAEPPD-----PD 66
Query: 141 KEKEKLKRKPKNWRLACQTTV 161
+ L + RL+CQ V
Sbjct: 67 HWHDDLADRFSYPRLSCQLRV 87
>gi|294673944|ref|YP_003574560.1| NADH:ubiquinone oxidoreductase F subunit [Prevotella ruminicola 23]
gi|294474128|gb|ADE83517.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella ruminicola
23]
Length = 422
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G +CG C V+V+EG G D EK RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKVQVLEGG---GEILDSEKPHFTRKQIKDHWRLGCQCKV 114
>gi|390441740|ref|ZP_10229776.1| Ferredoxin [Microcystis sp. T1-4]
gi|389834947|emb|CCI33902.1| Ferredoxin [Microcystis sp. T1-4]
Length = 110
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR ++L +I LY ++ L NC G G+CGTC V ++ + +EK +L
Sbjct: 16 GANLRRVLLKHDISLYNGGSQ-LINCRGIGSCGTCAVAIVGEVSAINW---QEKARLSLP 71
Query: 150 PKN----WRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPDNHRRLACQVRV 87
>gi|340346235|ref|ZP_08669361.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
dentalis DSM 3688]
gi|433651443|ref|YP_007277822.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella dentalis DSM 3688]
gi|339612183|gb|EGQ16997.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
dentalis DSM 3688]
gi|433301976|gb|AGB27792.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella dentalis DSM 3688]
Length = 423
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G +CG C V+V+EG G D EK RK +WRL CQ V
Sbjct: 68 SACGGKASCGQCKVQVLEGG---GEILDSEKPHFSRKQIKDHWRLGCQCKV 115
>gi|416862520|ref|ZP_11915022.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 138244]
gi|334835951|gb|EGM14792.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 138244]
gi|453043727|gb|EME91455.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PA21_ST175]
Length = 407
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + +N+ L S C GGGTC C V+EG G E
Sbjct: 45 HSLTVPAGGKLLQTLAANNVFLS-------SACGGGGTCAQCKCVVVEGG---GEMLPTE 94
Query: 143 KEKLKRK--PKNWRLACQTTV 161
+ R+ + WRL+CQT V
Sbjct: 95 ESHFTRRQAKEGWRLSCQTPV 115
>gi|421153564|ref|ZP_15613105.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 14886]
gi|404523406|gb|EKA33829.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 14886]
Length = 407
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + +N+ L S C GGGTC C V+EG G E
Sbjct: 45 HSLTVPAGGKLLQTLAANNVFLS-------SACGGGGTCAQCKCVVVEGG---GEMLPTE 94
Query: 143 KEKLKRK--PKNWRLACQTTV 161
+ R+ + WRL+CQT V
Sbjct: 95 ESHFTRRQAKEGWRLSCQTPV 115
>gi|282859445|ref|ZP_06268550.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bivia
JCVIHMP010]
gi|424900872|ref|ZP_18324414.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella bivia DSM 20514]
gi|282587673|gb|EFB92873.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bivia
JCVIHMP010]
gi|388593072|gb|EIM33311.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella bivia DSM 20514]
Length = 420
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C +V+EG G D E+ RK +NWRL CQ V
Sbjct: 66 SACGGKASCGQCKCQVVEGG---GEILDSERPHFSRKEIKENWRLGCQAKV 113
>gi|218890807|ref|YP_002439671.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa LESB58]
gi|421179845|ref|ZP_15637419.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa E2]
gi|218771030|emb|CAW26795.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa LESB58]
gi|404546423|gb|EKA55477.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa E2]
Length = 407
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + +N+ L S C GGGTC C V+EG G E
Sbjct: 45 HSLTVPAGGKLLQTLAANNVFLS-------SACGGGGTCAQCKCVVVEGG---GEMLPTE 94
Query: 143 KEKLKRK--PKNWRLACQTTV 161
+ R+ + WRL+CQT V
Sbjct: 95 ESHFTRRQAKEGWRLSCQTPV 115
>gi|297621230|ref|YP_003709367.1| ferredoxin [2Fe-2S] 4 [Waddlia chondrophila WSU 86-1044]
gi|297376531|gb|ADI38361.1| putative ferredoxin [2Fe-2S] 4 [Waddlia chondrophila WSU 86-1044]
gi|337293458|emb|CCB91447.1| Ferredoxin-4 [Waddlia chondrophila 2032/99]
Length = 88
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
G CGTC++E+ EG E L T +E + L P++ RLACQ +
Sbjct: 37 GVCGTCVIEIKEGGENLSDPTQEEIDFLGDDPQDERLACQCKI 79
>gi|428296951|ref|YP_007135257.1| ferredoxin [Calothrix sp. PCC 6303]
gi|428233495|gb|AFY99284.1| ferredoxin [Calothrix sp. PCC 6303]
Length = 112
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKP 150
LR +L + I+LY A+ + NC G GTCGTC V IEG+ + DK + L
Sbjct: 19 LRSCLLRNGIELYNGGAKVI-NCRGIGTCGTCAV-YIEGEVNQPNWKDKARRSLPPHSPT 76
Query: 151 KNWRLACQTTV 161
+ RLACQT V
Sbjct: 77 RELRLACQTQV 87
>gi|88770646|gb|ABD51926.1| chloroplast ferredoxin-like [Guillardia theta]
Length = 165
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN 152
LRD ML +DLY L NC GGG CGTC V+++ G L RT E++ LK P +
Sbjct: 87 LRDAMLAGKVDLYYTMKGKLFNCGGGGNCGTCKVDLVSGN--LSPRTAAEEKLLKGCPPS 144
Query: 153 WRLACQTTV 161
+RLACQ+ V
Sbjct: 145 FRLACQSCV 153
>gi|15598190|ref|NP_251684.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAO1]
gi|107102544|ref|ZP_01366462.1| hypothetical protein PaerPA_01003608 [Pseudomonas aeruginosa PACS2]
gi|254235968|ref|ZP_04929291.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa C3719]
gi|254241699|ref|ZP_04935021.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa 2192]
gi|386058032|ref|YP_005974554.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa M18]
gi|392983278|ref|YP_006481865.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa DK2]
gi|418586438|ref|ZP_13150480.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P1]
gi|418590993|ref|ZP_13154897.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P2]
gi|419756465|ref|ZP_14282815.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PADK2_CF510]
gi|420139180|ref|ZP_14647037.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CIG1]
gi|421159695|ref|ZP_15618808.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 25324]
gi|421517524|ref|ZP_15964198.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAO579]
gi|424942363|ref|ZP_18358126.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa NCMG1179]
gi|451985367|ref|ZP_21933589.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 18A]
gi|15214157|sp|Q9HZL1.1|NQRF_PSEAE RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|9949094|gb|AAG06382.1|AE004724_11 Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa PAO1]
gi|126167899|gb|EAZ53410.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa C3719]
gi|126195077|gb|EAZ59140.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa 2192]
gi|346058809|dbj|GAA18692.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa NCMG1179]
gi|347304338|gb|AEO74452.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa M18]
gi|375043181|gb|EHS35812.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P1]
gi|375050234|gb|EHS42717.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P2]
gi|384397196|gb|EIE43609.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PADK2_CF510]
gi|392318783|gb|AFM64163.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa DK2]
gi|403248050|gb|EJY61649.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CIG1]
gi|404347006|gb|EJZ73355.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAO579]
gi|404546452|gb|EKA55505.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 25324]
gi|451756984|emb|CCQ86112.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 18A]
Length = 407
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + +N+ L S C GGGTC C V+EG G E
Sbjct: 45 HSLTVPAGGKLLQTLAANNVFLS-------SACGGGGTCAQCKCVVVEGG---GEMLPTE 94
Query: 143 KEKLKRK--PKNWRLACQTTV 161
+ R+ + WRL+CQT V
Sbjct: 95 ESHFTRRQAKEGWRLSCQTPV 115
>gi|448407065|ref|ZP_21573492.1| (2Fe-2S)-binding protein [Halosimplex carlsbadense 2-9-1]
gi|445676278|gb|ELZ28801.1| (2Fe-2S)-binding protein [Halosimplex carlsbadense 2-9-1]
Length = 129
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 79 TPDIHFR--TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
TPD R TA G LRD++L + + +G YAR + NC G G C TC V + E +
Sbjct: 17 TPDGERRELTANEGAVLRDVLLEAGLSPHGRYARRV-NCGGRGLCATCGVRLAEPPD--- 72
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
D + L + RL+CQ V
Sbjct: 73 --PDHWHDDLADRFGYPRLSCQLRV 95
>gi|429726767|ref|ZP_19261553.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. oral
taxon 473 str. F0040]
gi|429145715|gb|EKX88800.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. oral
taxon 473 str. F0040]
Length = 424
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C ++ EG G D EK RK NWRL CQ V
Sbjct: 68 SACGGKGSCGQCRCQIPEGG---GEILDSEKPHFSRKEIKDNWRLGCQAKV 115
>gi|398814956|ref|ZP_10573632.1| ferredoxin [Brevibacillus sp. BC25]
gi|398035601|gb|EJL28836.1| ferredoxin [Brevibacillus sp. BC25]
Length = 136
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 110 RPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK-PKNWRLACQTT 160
+P++ G CG C V+++ G LL + T +EK KL K +RLACQ+T
Sbjct: 78 QPIAYKCQQGHCGKCSVQIVAGASLLDTPTGQEKAKLGEKLATGYRLACQST 129
>gi|385803906|ref|YP_005840306.1| ferredoxin 2Fe-2S [Haloquadratum walsbyi C23]
gi|339729398|emb|CCC40649.1| ferredoxin (2Fe-2S) [Haloquadratum walsbyi C23]
Length = 156
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 47/122 (38%), Gaps = 29/122 (23%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV---------IEGKELLG 136
T G LRD + N + YG + L NC G G C TC V V I ++
Sbjct: 24 TVSIGTNLRDALRNHDFSPYGRLSETL-NCGGNGLCATCGVRVRVYNNQQNDIADTQIHT 82
Query: 137 SRTDKEKEKLKRKPKNW-----------RLACQTTVGTPDSTGLVVIQQLPE---WKGHE 182
D P +W RL+CQ TV P +V+Q LP+ W G +
Sbjct: 83 DDNDIMYPDSGPTPNHWHDRLAARFGYPRLSCQITVSEP-----LVVQLLPKKLLWGGRK 137
Query: 183 WK 184
K
Sbjct: 138 TK 139
>gi|402847598|ref|ZP_10895878.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas sp. oral
taxon 279 str. F0450]
gi|402265990|gb|EJU15442.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas sp. oral
taxon 279 str. F0450]
Length = 404
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C V+E G E+L + T K ++ ++WRLACQT V
Sbjct: 59 SACGGSGSCGQCRCRVVEGGGEILPTETGFFSRKEQK--EHWRLACQTKV 106
>gi|300772651|ref|ZP_07082521.1| ferredoxin [Sphingobacterium spiritivorum ATCC 33861]
gi|300760954|gb|EFK57780.1| ferredoxin [Sphingobacterium spiritivorum ATCC 33861]
Length = 109
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP---KNWRLACQTTVG 162
L+ C G C TC V+++EG E L D+E + L P + RLACQ +G
Sbjct: 41 LATCGGMALCATCHVQILEGAENLSEPQDQELDMLDTLPDADEESRLACQIRLG 94
>gi|325102871|ref|YP_004272525.1| ferredoxin [Pedobacter saltans DSM 12145]
gi|324971719|gb|ADY50703.1| ferredoxin [Pedobacter saltans DSM 12145]
Length = 109
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 108 YARPLSNCAGGGTCGTCMVEVIEGK---ELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
Y +C G G CGTC++E++E K L E+ + KN RLACQ +
Sbjct: 40 YPDDFGDCLGMGKCGTCLIEILEFKTQPTFLDRNEGTTIERQHMQNKNIRLACQILI 96
>gi|254786011|ref|YP_003073440.1| Na(+)-translocating NADH-quinone reductase subunit F
[Teredinibacter turnerae T7901]
gi|237683890|gb|ACR11154.1| NADH:ubiquinone oxidoreductase, F subunit [Teredinibacter turnerae
T7901]
Length = 407
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T GG+ L+ + N NI L S C GGGTC C +V EG GS E+
Sbjct: 48 TPAGGKLLQTLAAN-NIFL-------ASACGGGGTCAQCKCKVFEGG---GSMLPTEESH 96
Query: 146 LKRKPK--NWRLACQTTV 161
R+ + WRL+CQ V
Sbjct: 97 FTRRDERDGWRLSCQVAV 114
>gi|281422413|ref|ZP_06253412.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella copri DSM 18205]
gi|281403534|gb|EFB34214.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella copri DSM 18205]
Length = 424
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G +CG C V+V+EG G D EK RK +WRL CQ V
Sbjct: 69 SACGGKASCGQCKVQVLEGG---GEILDSEKPHFTRKQIKDHWRLGCQCKV 116
>gi|333993623|ref|YP_004526236.1| ferredoxin [Treponema azotonutricium ZAS-9]
gi|333734266|gb|AEF80215.1| ferredoxin [Treponema azotonutricium ZAS-9]
Length = 662
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 24/102 (23%)
Query: 77 DGTP-DIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
D P +IHF+ A G L + +N+ + P C+G G+CG C+V ++ G
Sbjct: 22 DSAPGEIHFQ-APKGIPLLEAAKQANVAIDAP-------CSGNGSCGKCLVRILSG---- 69
Query: 136 GSRTDKEKEKL---KRKPKNWRLACQT------TVGTPDSTG 168
R + EK + + + WRLACQT TV P S G
Sbjct: 70 --RAESEKSRHISPESYEEGWRLACQTKVLGDLTVLVPGSAG 109
>gi|410942735|ref|ZP_11374509.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
noguchii str. 2006001870]
gi|410782218|gb|EKR71235.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
noguchii str. 2006001870]
Length = 530
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK- 149
Q L +I LN+ I P+ C G C TC V V+E L KEKE ++K
Sbjct: 18 QNLLEISLNNGI----PHTHA---CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKG 70
Query: 150 -PKNWRLACQTTV 161
PK+ RLACQ V
Sbjct: 71 FPKSVRLACQAKV 83
>gi|383620008|ref|ZP_09946414.1| ferredoxin [Halobiforma lacisalsi AJ5]
gi|448696382|ref|ZP_21697856.1| ferredoxin [Halobiforma lacisalsi AJ5]
gi|445783588|gb|EMA34416.1| ferredoxin [Halobiforma lacisalsi AJ5]
Length = 124
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++L + + + A L NC G TCGTC V V EG + T E+ +L
Sbjct: 16 GAILRDVLLEAGLSPHNGMADTL-NCGGHATCGTCAVRV-EGD--VSEPTAAERRRLSVP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 72 PLRGREGLRLACQTEV 87
>gi|448664385|ref|ZP_21684188.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula amylolytica JCM 13557]
gi|445775030|gb|EMA26044.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula amylolytica JCM 13557]
Length = 111
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 81 DIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTD 140
+ H TA G LRD++L++++ +G YA+ + NC G G C TC V + E + D
Sbjct: 13 ETHELTAERGAVLRDVLLDADLSPHGRYAKRV-NCGGRGICATCGVRLAEPPD-----PD 66
Query: 141 KEKEKLKRKPKNWRLACQTTV 161
+ L + RL+CQ V
Sbjct: 67 HWHDDLADRFGYPRLSCQLRV 87
>gi|16272320|ref|NP_438533.1| ferredoxin [Haemophilus influenzae Rd KW20]
gi|68248975|ref|YP_248087.1| (2Fe-2S) ferredoxin [Haemophilus influenzae 86-028NP]
gi|145632619|ref|ZP_01788353.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 3655]
gi|145634632|ref|ZP_01790341.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittAA]
gi|145636360|ref|ZP_01792029.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittHH]
gi|145638719|ref|ZP_01794328.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittII]
gi|145640322|ref|ZP_01795906.1| ferredoxin, 2Fe-2S [Haemophilus influenzae R3021]
gi|148825345|ref|YP_001290098.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittEE]
gi|148827511|ref|YP_001292264.1| hypothetical protein CGSHiGG_04670 [Haemophilus influenzae PittGG]
gi|229844540|ref|ZP_04464680.1| hypothetical protein CGSHi6P18H1_09500 [Haemophilus influenzae
6P18H1]
gi|229846459|ref|ZP_04466567.1| hypothetical protein CGSHi7P49H1_07300 [Haemophilus influenzae
7P49H1]
gi|260580565|ref|ZP_05848393.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae RdAW]
gi|260582536|ref|ZP_05850326.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae NT127]
gi|319775761|ref|YP_004138249.1| ferredoxin, 2Fe-2S [Haemophilus influenzae F3047]
gi|319896701|ref|YP_004134894.1| ferredoxin, 2fe-2S [Haemophilus influenzae F3031]
gi|378696555|ref|YP_005178513.1| [2Fe-2S] ferredoxin [Haemophilus influenzae 10810]
gi|386265233|ref|YP_005828725.1| [2FE-2S] ferredoxin, electron carrer protein [Haemophilus
influenzae R2846]
gi|1169674|sp|P44428.2|FER_HAEIN RecName: Full=2Fe-2S ferredoxin
gi|1573341|gb|AAC22030.1| ferredoxin (fdx-1) [Haemophilus influenzae Rd KW20]
gi|68057174|gb|AAX87427.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 86-028NP]
gi|144986814|gb|EDJ93366.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 3655]
gi|145268177|gb|EDK08172.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittAA]
gi|145270525|gb|EDK10459.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittHH]
gi|145272314|gb|EDK12222.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittII]
gi|145274908|gb|EDK14770.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 22.4-21]
gi|148715505|gb|ABQ97715.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittEE]
gi|148718753|gb|ABQ99880.1| hypothetical protein CGSHiGG_04670 [Haemophilus influenzae PittGG]
gi|229810552|gb|EEP46270.1| hypothetical protein CGSHi7P49H1_07300 [Haemophilus influenzae
7P49H1]
gi|229812789|gb|EEP48478.1| hypothetical protein CGSHi6P18H1_09500 [Haemophilus influenzae
6P18H1]
gi|260092907|gb|EEW76842.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae RdAW]
gi|260094347|gb|EEW78245.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae NT127]
gi|301169074|emb|CBW28671.1| [2Fe-2S] ferredoxin [Haemophilus influenzae 10810]
gi|309750209|gb|ADO80193.1| [2FE-2S] ferredoxin, electron carrer protein [Haemophilus
influenzae R2866]
gi|309972469|gb|ADO95670.1| [2FE-2S] ferredoxin, electron carrer protein [Haemophilus
influenzae R2846]
gi|317432203|emb|CBY80555.1| ferredoxin, 2Fe-2S [Haemophilus influenzae F3031]
gi|317450352|emb|CBY86568.1| ferredoxin, 2Fe-2S [Haemophilus influenzae F3047]
Length = 113
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLP--DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP D P+ A G L ++ N+ ++++ C G C TC V V E
Sbjct: 5 IFLPNEDFCPEGMVVDAATGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVIVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGNED-----LVVEIPKYN 104
>gi|440751776|ref|ZP_20930979.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
gi|440176269|gb|ELP55542.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
Length = 110
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR I+L +I LY ++ + NC G G+CGTC V ++ + +EK +
Sbjct: 16 GENLRRILLKHDISLYNGGSKFI-NCRGIGSCGTCAVAIVGEVSAINW---QEKARFSLP 71
Query: 150 P----KNWRLACQTTV 161
P N RLACQ V
Sbjct: 72 PHNPNNNRRLACQVKV 87
>gi|333030251|ref|ZP_08458312.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides coprosuis
DSM 18011]
gi|332740848|gb|EGJ71330.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides coprosuis
DSM 18011]
Length = 416
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQTTV 161
S C G G+CG C +V+EG G EK RK +N WRL CQ V
Sbjct: 69 SACGGKGSCGQCTCQVLEGG---GEILPTEKVHFSRKEQNAKWRLGCQVKV 116
>gi|79326134|ref|NP_001031772.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
gi|332660686|gb|AEE86086.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
Length = 176
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 9/141 (6%)
Query: 15 SLPYNFNCTTNSHKSLKFYKRVS-FSRSRI-----RATATISENDSQANAAEEPPVVNFA 68
SL +N T S+ ++ +++VS R+R+ ++++ + Q +A P +
Sbjct: 3 SLGFNLGFTF-SNAQIQQHRKVSGGGRARVISCNSSSSSSSQASSPQGISAVTPLEIELE 61
Query: 69 FVHSVLLPDGTPDIHFRTACGGQK-LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVE 127
F DG+ + A G K LR IM ++ I+LY Y + + NC GGG+CGTC+VE
Sbjct: 62 FFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAYGKVM-NCGGGGSCGTCIVE 120
Query: 128 VIEGKELLGSRTDKEKEKLKR 148
+++G++LL RTD E LK+
Sbjct: 121 ILDGRDLLNERTDTENRYLKK 141
>gi|448466696|ref|ZP_21599201.1| ferredoxin [Halorubrum kocurii JCM 14978]
gi|445813556|gb|EMA63533.1| ferredoxin [Halorubrum kocurii JCM 14978]
Length = 104
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y + L NC G G+CG+C V+V +G+ + KEK +L
Sbjct: 16 GDVLRDVLAEAGLSVYNGKMKQL-NCRGAGSCGSCAVQV-DGE--VSEPGKKEKTRLWFP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 72 PHHPSHDVRLACQTKV 87
>gi|325857417|ref|ZP_08172472.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella denticola
CRIS 18C-A]
gi|327314253|ref|YP_004329690.1| NADH:ubiquinone oxidoreductase subunit F [Prevotella denticola
F0289]
gi|325483127|gb|EGC86107.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella denticola
CRIS 18C-A]
gi|326946336|gb|AEA22221.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella denticola
F0289]
Length = 422
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKVQVVEGG---GEILDSERPHFSRKEIKDHWRLGCQCKV 114
>gi|325270531|ref|ZP_08137131.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
multiformis DSM 16608]
gi|324987107|gb|EGC19090.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
multiformis DSM 16608]
Length = 422
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKVQVVEGG---GEILDSERPHFSRKEIKDHWRLGCQCKV 114
>gi|448457344|ref|ZP_21595764.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
gi|445810660|gb|EMA60677.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
Length = 104
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y + L NC G G+CG+C V+V +G+ + KEK +L
Sbjct: 16 GDVLRDVLAEAGLSVYNGKMKQL-NCRGSGSCGSCAVQV-DGE--VSEPGKKEKARLWFP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 72 PHHPSHDVRLACQTKV 87
>gi|340353581|ref|ZP_08676393.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
pallens ATCC 700821]
gi|339609399|gb|EGQ14273.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
pallens ATCC 700821]
Length = 422
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C +V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKGSCGQCKCQVLEGG---GEILDSERPHFSRKEIKDHWRLGCQAKV 114
>gi|359728036|ref|ZP_09266732.1| adenylate/guanylate cyclase [Leptospira weilii str. 2006001855]
Length = 536
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
+VNF + LPD + Q L +I L S I P +N C G C
Sbjct: 3 LVNFENEKEISLPDNSAP---------QSLLEISLTSGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQ V
Sbjct: 46 TCRVLVLENSSNLSPPEQKEKDLSQKKGFPKSVRLACQAKV 86
>gi|371775771|ref|ZP_09482093.1| Na(+)-translocating NADH-quinone reductase subunit F [Anaerophaga
sp. HS1]
Length = 419
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C GGGTC C +V EG GS E RK ++WRLACQ V
Sbjct: 74 SACGGGGTCAMCRCQVHEGA---GSILPTETGHFTRKEQMQDWRLACQVKV 121
>gi|357042875|ref|ZP_09104576.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella histicola F0411]
gi|355368940|gb|EHG16351.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella histicola F0411]
Length = 422
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKVQVVEGG---GEILDSERPHFSRKEIKDHWRLGCQCKV 114
>gi|227538019|ref|ZP_03968068.1| ferredoxin, 2Fe-2S (andrenodoxin family) [Sphingobacterium
spiritivorum ATCC 33300]
gi|227242095|gb|EEI92110.1| ferredoxin, 2Fe-2S (andrenodoxin family) [Sphingobacterium
spiritivorum ATCC 33300]
Length = 109
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP---KNWRLACQTTVG 162
L+ C G C TC V+++EG E L D+E + L P RLACQ +G
Sbjct: 41 LATCGGMALCATCHVQILEGAENLSEPQDQELDMLDTLPDADDESRLACQIRLG 94
>gi|260590948|ref|ZP_05856406.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella veroralis F0319]
gi|260536813|gb|EEX19430.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella veroralis F0319]
Length = 422
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKVQVVEGG---GEILDSERPHFSRKEIKDHWRLGCQCKV 114
>gi|387131695|ref|YP_006297668.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella intermedia
17]
gi|386374543|gb|AFJ07695.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella intermedia
17]
Length = 422
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C +V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKGSCGQCKCQVLEGG---GEILDSERPHFSRKEVKDHWRLGCQAKV 114
>gi|340350761|ref|ZP_08673735.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
nigrescens ATCC 33563]
gi|445112360|ref|ZP_21377008.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella nigrescens F0103]
gi|339607138|gb|EGQ12088.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
nigrescens ATCC 33563]
gi|444841584|gb|ELX68598.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella nigrescens F0103]
Length = 422
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 11/66 (16%)
Query: 98 LNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRL 155
LN N D++ P S C G G+CG C +V+EG G D E+ RK +WRL
Sbjct: 58 LNEN-DVHLP-----SACGGKGSCGQCKCQVLEGG---GEILDSERPHFTRKEIKNHWRL 108
Query: 156 ACQTTV 161
CQ V
Sbjct: 109 GCQAKV 114
>gi|448427446|ref|ZP_21583761.1| ferredoxin [Halorubrum terrestre JCM 10247]
gi|448451316|ref|ZP_21592799.1| ferredoxin [Halorubrum litoreum JCM 13561]
gi|448482869|ref|ZP_21605640.1| ferredoxin [Halorubrum arcis JCM 13916]
gi|448513889|ref|ZP_21616820.1| ferredoxin [Halorubrum distributum JCM 9100]
gi|448526601|ref|ZP_21619870.1| ferredoxin [Halorubrum distributum JCM 10118]
gi|445678133|gb|ELZ30627.1| ferredoxin [Halorubrum terrestre JCM 10247]
gi|445693042|gb|ELZ45205.1| ferredoxin [Halorubrum distributum JCM 9100]
gi|445698828|gb|ELZ50866.1| ferredoxin [Halorubrum distributum JCM 10118]
gi|445810750|gb|EMA60766.1| ferredoxin [Halorubrum litoreum JCM 13561]
gi|445821155|gb|EMA70951.1| ferredoxin [Halorubrum arcis JCM 13916]
Length = 104
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y L NC G G+CG+C V+V EG+ + KE+ +L
Sbjct: 16 GANLRDVLKEAGLSVYNGKMEQL-NCRGAGSCGSCAVQV-EGE--VSEPGKKERARLWLP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 72 PHHPSHDVRLACQTKV 87
>gi|418753185|ref|ZP_13309438.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. MOR084]
gi|409966431|gb|EKO34275.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. MOR084]
Length = 536
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
++NF + LPD +P + L +I L + I P +N C G C
Sbjct: 3 LINFENEKEISLPDDSPP---------RSLLEISLANGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQT V
Sbjct: 46 TCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQTKV 86
>gi|332299361|ref|YP_004441282.1| NADH:ubiquinone oxidoreductase subunit F [Porphyromonas
asaccharolytica DSM 20707]
gi|332176424|gb|AEE12114.1| NADH:ubiquinone oxidoreductase, subunit F [Porphyromonas
asaccharolytica DSM 20707]
Length = 415
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C V+E G E+L T+K K + +WRL CQT V
Sbjct: 70 SACGGSGSCGQCRCRVVEGGGEILA--TEKGFFSRKEQMAHWRLGCQTKV 117
>gi|257065297|ref|YP_003144969.1| metal-binding protein [Slackia heliotrinireducens DSM 20476]
gi|256792950|gb|ACV23620.1| uncharacterized metal-binding protein [Slackia heliotrinireducens
DSM 20476]
Length = 606
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
GQ L D +L++N+ + P C G GTCG C V+V+ + + T++ K
Sbjct: 18 GQSLLDALLDANVAVDNP-------CNGKGTCGKCRVKVVSENPVAPTETERRLLSAKEI 70
Query: 150 PKNWRLAC 157
RLAC
Sbjct: 71 EAGVRLAC 78
>gi|313886029|ref|ZP_07819767.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924559|gb|EFR35330.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas
asaccharolytica PR426713P-I]
Length = 412
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C V+E G E+L T+K K + +WRL CQT V
Sbjct: 67 SACGGSGSCGQCRCRVVEGGGEILA--TEKGFFSRKEQMAHWRLGCQTKV 114
>gi|418743840|ref|ZP_13300199.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. CBC379]
gi|410795235|gb|EKR93132.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. CBC379]
Length = 536
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
++NF + LPD +P + L +I L + I P +N C G C
Sbjct: 3 LINFENEKEISLPDDSPP---------RSLLEISLANGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQT V
Sbjct: 46 TCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQTKV 86
>gi|345880839|ref|ZP_08832377.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oulorum F0390]
gi|343921813|gb|EGV32525.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oulorum F0390]
Length = 422
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKVQVLEGG---GEILDSERPHFSRKEIKDHWRLGCQCKV 114
>gi|359687961|ref|ZP_09257962.1| adenylate/guanylate cyclase [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750300|ref|ZP_13306586.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
licerasiae str. MMD4847]
gi|418758764|ref|ZP_13314946.1| 2Fe-2S iron-sulfur cluster-binding domain / adenylate/guanylate
cyclase catalytic domain / peroxidase multi-domain
protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384114666|gb|EIE00929.1| 2Fe-2S iron-sulfur cluster-binding domain / adenylate/guanylate
cyclase catalytic domain / peroxidase multi-domain
protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404272903|gb|EJZ40223.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
licerasiae str. MMD4847]
Length = 576
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLVVI 172
C G C TC V + +G E L R +KE ++K P N RLACQT + G VV+
Sbjct: 72 CGGNARCSTCRVLIQDGDEHLLPRNEKETTLAQKKGFPDNVRLACQTK-----TEGDVVL 126
Query: 173 QQL 175
++L
Sbjct: 127 RRL 129
>gi|88800092|ref|ZP_01115662.1| Na(+)-translocating NADH-quinone reductase subunit F [Reinekea
blandensis MED297]
gi|88777218|gb|EAR08423.1| Na(+)-translocating NADH-quinone reductase subunit F [Reinekea
blandensis MED297]
Length = 408
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + N+ + L S C GGGTC C +V++G GS E+
Sbjct: 49 TTAAGGKLLQTLANNGVFLS-------SACGGGGTCAQCKCKVLDGG---GSALPTEEPH 98
Query: 146 LKRKP--KNWRLACQTTV 161
R + WRLACQ V
Sbjct: 99 FTRGELREGWRLACQVAV 116
>gi|251772771|gb|EES53333.1| ferredoxin [Leptospirillum ferrodiazotrophum]
Length = 100
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEK--EKLKRKPKNWRLACQTTVGT 163
CAG C TC+V+V+EG + L R E K ++RLACQT G+
Sbjct: 36 CAGESACATCLVKVVEGLDSLPPRNSVEDFLSKAMLLETDYRLACQTPAGS 86
>gi|313682429|ref|YP_004060167.1| ferredoxin [Sulfuricurvum kujiense DSM 16994]
gi|313155289|gb|ADR33967.1| ferredoxin [Sulfuricurvum kujiense DSM 16994]
Length = 96
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLK----RKPKNWRLACQTTVGTPDSTGLVVIQ 173
G CGTC+V + G E + TDKEK LK PK RLACQ V P+ GLV I+
Sbjct: 40 GECGTCVVMIESGMEYMSPVTDKEKAVLKTLNESNPK-ARLACQMKVIAPN--GLVRIK 95
>gi|86607680|ref|YP_476442.1| (Fe-S)-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556222|gb|ABD01179.1| iron-sulfur cluster-binding protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 343
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 110 RPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQTTVGTPDST 167
R + C G C TC + ++EG + S T EK +R P + RLACQT + T
Sbjct: 30 RHVHACGGNAACSTCRILILEGSQNCRSMTPAEKRLAQRLDLPVHIRLACQTRI-----T 84
Query: 168 GLVVIQQL 175
G V +Q+L
Sbjct: 85 GDVTLQRL 92
>gi|170079270|ref|YP_001735908.1| ferredoxin [Synechococcus sp. PCC 7002]
gi|169886939|gb|ACB00653.1| probable ferredoxin [Synechococcus sp. PCC 7002]
Length = 169
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKPKNWRLACQTTV 161
C G G CGTC+V V+ G L T +E+ LK+ +RL+CQ V
Sbjct: 59 CGGKGYCGTCVVHVVSGATQLSPVTAQEQTILNNLKKSSDTYRLSCQAYV 108
>gi|399574933|ref|ZP_10768691.1| hypothetical protein HSB1_07300 [Halogranum salarium B-1]
gi|399239201|gb|EJN60127.1| hypothetical protein HSB1_07300 [Halogranum salarium B-1]
Length = 116
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV--IEGKEL-LGSRTDKEKEKL 146
G LRD++L + + A L NC G+CGTC VE+ + G EL + S T +E+ +L
Sbjct: 16 GSVLRDVLLAAGETPHNGRADVL-NCREHGSCGTCAVELGTLAGDELAVSSPTKRERARL 74
Query: 147 KRKPKN-------WRLACQTTV 161
P + RLACQT V
Sbjct: 75 SFPPHSAESLDAGLRLACQTQV 96
>gi|448683828|ref|ZP_21692448.1| (2Fe-2S)-binding protein [Haloarcula japonica DSM 6131]
gi|445783401|gb|EMA34230.1| (2Fe-2S)-binding protein [Haloarcula japonica DSM 6131]
Length = 111
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
TA G LRD++L++ + +G YA + NC G G C TC V + E E D +
Sbjct: 18 TAQAGAILRDVLLDAGLSPHGRYATRV-NCGGRGICATCGVRLAEPPE-----PDHWHDD 71
Query: 146 LKRKPKNWRLACQTTV 161
L + RL+CQ V
Sbjct: 72 LADRFGYPRLSCQIQV 87
>gi|88705090|ref|ZP_01102802.1| Na(+)-translocating NADH-quinone reductase subunit F
[Congregibacter litoralis KT71]
gi|88700785|gb|EAQ97892.1| Na(+)-translocating NADH-quinone reductase subunit F
[Congregibacter litoralis KT71]
Length = 405
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + ++N+ L S C GGGTC C V EG GS E+
Sbjct: 45 TVPAGGKLLQTLSDANVFL-------ASACGGGGTCAQCKCIVNEGG---GSMLPTEESH 94
Query: 146 LKRK--PKNWRLACQTTV 161
R+ WRL+CQT V
Sbjct: 95 FTRRDAADGWRLSCQTAV 112
>gi|86606592|ref|YP_475355.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86555134|gb|ABD00092.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 161
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKPKNWRLACQTTV 161
L C G G C TC V V EG E L + T +E+ E + + N RLACQ V
Sbjct: 34 LKECGGRGLCATCHVYVKEGMESLSAMTPREQRTLEVITTRKTNSRLACQARV 86
>gi|338212882|ref|YP_004656937.1| ferredoxin [Runella slithyformis DSM 19594]
gi|336306703|gb|AEI49805.1| ferredoxin [Runella slithyformis DSM 19594]
Length = 120
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW---RLACQTTV 161
L+ C G C TC VEV+EG + L S +D E + L P RLACQ V
Sbjct: 52 LATCGGMALCATCHVEVLEGGDSLPSVSDAELDILDTLPAATSCSRLACQLRV 104
>gi|55379207|ref|YP_137057.1| (2Fe-2S)-binding protein [Haloarcula marismortui ATCC 43049]
gi|448638301|ref|ZP_21676274.1| (2Fe-2S)-binding protein [Haloarcula sinaiiensis ATCC 33800]
gi|448655202|ref|ZP_21682054.1| (2Fe-2S)-binding protein [Haloarcula californiae ATCC 33799]
gi|55231932|gb|AAV47351.1| 2Fe-2S iron-sulfur cluster binding domain [Haloarcula marismortui
ATCC 43049]
gi|445763550|gb|EMA14737.1| (2Fe-2S)-binding protein [Haloarcula sinaiiensis ATCC 33800]
gi|445765651|gb|EMA16789.1| (2Fe-2S)-binding protein [Haloarcula californiae ATCC 33799]
Length = 111
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 81 DIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTD 140
+ H TA G LRD++L++++ +G YA + NC G G C TC V + E + D
Sbjct: 13 ETHELTAEPGAVLRDVLLDADLSPHGRYATRV-NCGGRGICATCGVRLAEPPD-----PD 66
Query: 141 KEKEKLKRKPKNWRLACQTTV 161
+ L + RL+CQ V
Sbjct: 67 HWHDDLADRFGYPRLSCQLQV 87
>gi|392955993|ref|ZP_10321523.1| ferredoxin [Bacillus macauensis ZFHKF-1]
gi|391878235|gb|EIT86825.1| ferredoxin [Bacillus macauensis ZFHKF-1]
Length = 106
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G KL + + + +D+ L C G C TC VEV+ G LG+ + E+ ++ K
Sbjct: 17 GTKLVNALEDHGVDI-------LHRCGGKARCTTCRVEVLAGD--LGAMNEMEQALIQSK 67
Query: 150 --PKNWRLACQTTV 161
P N RL+CQ TV
Sbjct: 68 GLPDNVRLSCQVTV 81
>gi|429737806|ref|ZP_19271653.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
saccharolytica F0055]
gi|429161939|gb|EKY04304.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
saccharolytica F0055]
Length = 422
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C ++V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKLQVVEGG---GEILDSERSHFTRKEIKDHWRLGCQCKV 114
>gi|434392926|ref|YP_007127873.1| ferredoxin [Gloeocapsa sp. PCC 7428]
gi|428264767|gb|AFZ30713.1| ferredoxin [Gloeocapsa sp. PCC 7428]
Length = 109
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--K 147
G LR ++L + ++ + A + NC G GTCGTC V +EG+ + DK + L
Sbjct: 16 GVNLRQVLLQNEVNPHNGNA-TIINCRGIGTCGTCAV-FVEGEVSEVNWRDKARRSLPPH 73
Query: 148 RKPKNWRLACQTTV 161
+N RLACQT V
Sbjct: 74 DPTRNLRLACQTQV 87
>gi|222478486|ref|YP_002564723.1| ferredoxin [Halorubrum lacusprofundi ATCC 49239]
gi|222451388|gb|ACM55653.1| ferredoxin [Halorubrum lacusprofundi ATCC 49239]
Length = 104
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y A NC G G+CGTC V+V + KEK +L
Sbjct: 16 GAILRDVLKEAGLSVYNGRAEQF-NCRGTGSCGTCAVQV---DGAVSEPGKKEKARLWLP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 72 PHHPSHDVRLACQTRV 87
>gi|389879632|ref|YP_006381862.1| ferredoxin [Tistrella mobilis KA081020-065]
gi|388531022|gb|AFK56217.1| ferredoxin [Tistrella mobilis KA081020-065]
Length = 590
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQ 158
C G G C TC V V++G++ L E E L+ R P + RLACQ
Sbjct: 298 CGGQGRCSTCRVRVLDGRDQLPPPRAVEAEMLRRIRAPGDVRLACQ 343
>gi|346224059|ref|ZP_08845201.1| Na(+)-translocating NADH-quinone reductase subunit F [Anaerophaga
thermohalophila DSM 12881]
Length = 419
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C GGGTC C +V EG GS E RK ++WRLACQ V
Sbjct: 74 SACGGGGTCAMCRCQVHEGA---GSILPTETGYFTRKEQMQDWRLACQVKV 121
>gi|329123602|ref|ZP_08252162.1| ferredoxin [Haemophilus aegyptius ATCC 11116]
gi|327469801|gb|EGF15266.1| ferredoxin [Haemophilus aegyptius ATCC 11116]
Length = 113
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V V EG + L TD+E++ L +
Sbjct: 24 GDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVIVREGFDSLNETTDQEEDMLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+ RL+CQ VG D ++ ++P++
Sbjct: 77 WGLEMDSRLSCQCVVGNED-----LVVEIPKYN 104
>gi|424863189|ref|ZP_18287102.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86A]
gi|400757810|gb|EJP72021.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86A]
Length = 408
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK- 147
G KL + ++NI L S C GGGTC C +V EG GS E+
Sbjct: 52 AGSKLLTTLADNNIFL-------ASACGGGGTCSQCKCQVFEGG---GSILAAEESHFNA 101
Query: 148 -RKPKNWRLACQTTV 161
+K WRL+CQ V
Sbjct: 102 TQKKDGWRLSCQVPV 116
>gi|389846715|ref|YP_006348954.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|388244021|gb|AFK18967.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
Length = 89
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN----WRLACQTTVGTPDSTGL 169
NC G G+CGTC V V + + RT KE +L+ P + RLACQT V G
Sbjct: 18 NCHGRGSCGTCAVRV---QGPVTYRTKKETRRLRLPPHDPDSGLRLACQTLV-----LGD 69
Query: 170 VVIQQLPEWKGHE 182
+ +++ P + GH
Sbjct: 70 IWVEKYPGFWGHH 82
>gi|167838540|ref|ZP_02465399.1| ferredoxin [Burkholderia thailandensis MSMB43]
gi|424906120|ref|ZP_18329623.1| ferredoxin [Burkholderia thailandensis MSMB43]
gi|390929013|gb|EIP86417.1| ferredoxin [Burkholderia thailandensis MSMB43]
Length = 99
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 101 NIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKPKNWRLAC 157
+L+G + P AG CG C++EV+EG++ LG R+ E + L +RLAC
Sbjct: 25 EFELHGQESIPFGCRAG--ACGACVIEVLEGRDQLGKRSTGESAFLDTLGYAGDAFRLAC 82
Query: 158 QTTV 161
Q V
Sbjct: 83 QCRV 86
>gi|152987897|ref|YP_001347537.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PA7]
gi|452880172|ref|ZP_21957187.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa VRFPA01]
gi|189030476|sp|A6V3A2.1|NQRF_PSEA7 RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|150963055|gb|ABR85080.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, f subunit
[Pseudomonas aeruginosa PA7]
gi|452183350|gb|EME10368.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa VRFPA01]
Length = 407
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + +N+ L S C GGGTC C V++G G E
Sbjct: 45 HSLTVPAGGKLLQTLAANNVFLS-------SACGGGGTCAQCKCVVVDGG---GEMLPTE 94
Query: 143 KEKLKRK--PKNWRLACQTTV 161
+ R+ + WRL+CQT V
Sbjct: 95 ESHFTRRQAKEGWRLSCQTPV 115
>gi|302336562|ref|YP_003801768.1| ferredoxin [Spirochaeta smaragdinae DSM 11293]
gi|301633747|gb|ADK79174.1| ferredoxin [Spirochaeta smaragdinae DSM 11293]
Length = 105
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 111 PLSN-CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK----PKNWRLACQTTVGTPD 165
P+S+ C G CGTC V++++G+ ++E+ +L K P++ RLACQT +
Sbjct: 31 PISHLCGGKAQCGTCRVKILDGESFCSPMGERERLRLSGKEGTLPESVRLACQTYI---- 86
Query: 166 STGLVVIQQLPEWKGHEWK 184
G VV++ L + + K
Sbjct: 87 -RGRVVVRILASGRSLDKK 104
>gi|398333343|ref|ZP_10518048.1| adenylate/guanylate cyclase [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 536
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
+VNF + LPD + Q L +I L + I P +N C G C
Sbjct: 3 LVNFENEKEISLPDNSAP---------QSLLEISLANGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQT V
Sbjct: 46 TCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQTKV 86
>gi|451947019|ref|YP_007467614.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Desulfocapsa sulfexigens DSM 10523]
gi|451906367|gb|AGF77961.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Desulfocapsa sulfexigens DSM 10523]
Length = 145
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQT------TVGTP 164
+ C G CG C + ++EG++ L ++E ++L + + WRL+CQT TV P
Sbjct: 74 TTCGGHANCGCCRIRILEGEKGLTQPNEREVKRLGKDLISQGWRLSCQTHSLRDITVHMP 133
Query: 165 DSTGL 169
S L
Sbjct: 134 TSNEL 138
>gi|373467495|ref|ZP_09558791.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sp. oral taxon 851
str. F0397]
gi|371758529|gb|EHO47296.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sp. oral taxon 851
str. F0397]
Length = 131
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V + E
Sbjct: 23 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVIIRE 75
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 76 GFDSLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGDED-----LVVEIPKY 121
>gi|395763208|ref|ZP_10443877.1| (2Fe-2S) ferredoxin [Janthinobacterium lividum PAMC 25724]
Length = 113
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 16/99 (16%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H+ L PDG A G+ + DI+L ++ID+ C C TC V V E
Sbjct: 9 HAKLCPDGA----VIEAPAGKSICDILLENDIDIE-------HACEKSCACTTCHVLVRE 57
Query: 131 GKELLGSRTDKEKEKLKR----KPKNWRLACQTTVGTPD 165
G L T+ E++ L + +P++ RL+CQ+ V D
Sbjct: 58 GIASLNEATELEEDMLDKAWGLEPQS-RLSCQSIVAETD 95
>gi|374587368|ref|ZP_09660460.1| adenylate/guanylate cyclase [Leptonema illini DSM 21528]
gi|373876229|gb|EHQ08223.1| adenylate/guanylate cyclase [Leptonema illini DSM 21528]
Length = 538
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNW----RLACQTTV 161
C G C TC V V++G + L +TD+EK KL RK KN+ RLACQ +
Sbjct: 38 CGGNARCSTCRVMVLDGMDNLEPQTDEEK-KLARK-KNFEEGIRLACQARI 86
>gi|99080454|ref|YP_612608.1| guanylate cyclase [Ruegeria sp. TM1040]
gi|99036734|gb|ABF63346.1| adenylate/guanylate cyclase [Ruegeria sp. TM1040]
Length = 586
Score = 40.4 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 109 ARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQTT 160
A P S C G G C TC V ++ G + L T E L+ P+N RLACQ T
Sbjct: 307 AHP-SLCGGKGRCTTCRVAILAGGDDLPPPTAAEARSLRAINAPENMRLACQIT 359
>gi|441496862|ref|ZP_20979088.1| ferredoxin, 2Fe-2S type [Fulvivirga imtechensis AK7]
gi|441439335|gb|ELR72653.1| ferredoxin, 2Fe-2S type [Fulvivirga imtechensis AK7]
Length = 132
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 104 LYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQ--- 158
L+ + + C G G C TC + VIEG E LG T EK ++ +N RL CQ
Sbjct: 51 LHENFIDWMHACGGKGRCTTCKMIVIEGMENLGHLTVHEKRFMEMDALKENERLTCQCIL 110
Query: 159 ----TTVGTPDSTGLVVIQ 173
T+ P+++ L IQ
Sbjct: 111 EKGVVTIKVPETSKLPHIQ 129
>gi|374995790|ref|YP_004971289.1| metal-binding protein [Desulfosporosinus orientis DSM 765]
gi|357214156|gb|AET68774.1| putative metal-binding protein [Desulfosporosinus orientis DSM 765]
Length = 644
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G GTCG C V V+ G ++ + E+L K +RLAC+T V
Sbjct: 44 SGCGGKGTCGACKVVVLSGDPIIDGTGNLTSEQLS---KGYRLACKTLV 89
>gi|352100743|ref|ZP_08958299.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
HAL1]
gi|350600964|gb|EHA17020.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
HAL1]
Length = 410
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ +T GG+ L + N G + S C GGG+C C V EG +
Sbjct: 43 NGDPEHTLKTQAGGKLLNTLAAN------GIFLS--SACGGGGSCAQCKCRVEEGGGSI- 93
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
T++ ++ K + WRL+CQ V
Sbjct: 94 LPTEESHFTMREKKEGWRLSCQVPV 118
>gi|288927168|ref|ZP_06421049.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella buccae D17]
gi|288336055|gb|EFC74455.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella buccae D17]
Length = 422
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKSSCGQCRVQVMEGG---GEILDPERPHFTRKEIKNHWRLGCQCKV 114
>gi|317503076|ref|ZP_07961153.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
salivae DSM 15606]
gi|315665809|gb|EFV05399.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
salivae DSM 15606]
Length = 422
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G +CG C ++V+EG G D EK RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKLQVLEGG---GEILDSEKPHFTRKQIKDHWRLGCQCKV 114
>gi|429742342|ref|ZP_19275985.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas catoniae
F0037]
gi|429157388|gb|EKX99988.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas catoniae
F0037]
Length = 413
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C V+E G E+L + T K ++ ++WRL+CQT V
Sbjct: 68 SACGGSGSCGQCRCRVVEGGGEILPTETGFFSRKEQK--EHWRLSCQTKV 115
>gi|389576641|ref|ZP_10166669.1| putative metal-binding protein [Eubacterium cellulosolvens 6]
gi|389312126|gb|EIM57059.1| putative metal-binding protein [Eubacterium cellulosolvens 6]
Length = 813
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
DG D+ T G + + M ++L P C G G CG C V+V++G EL
Sbjct: 230 DGMRDMRRMTIPAGVGVLEYMQTQGVNLSAP-------CGGRGVCGKCGVQVVKG-ELPV 281
Query: 137 SRTDK---EKEKLKRKPKNWRLACQ 158
R D KE+L+ +RLACQ
Sbjct: 282 QRADSICYAKEQLQ---NGFRLACQ 303
>gi|402305922|ref|ZP_10824977.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. MSX73]
gi|400380182|gb|EJP33007.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. MSX73]
Length = 422
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKSSCGQCRVQVMEGG---GEILDPERPHFTRKEIKNHWRLGCQCKV 114
>gi|315608987|ref|ZP_07883959.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
buccae ATCC 33574]
gi|315249367|gb|EFU29384.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
buccae ATCC 33574]
Length = 422
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C V+V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKSSCGQCRVQVMEGG---GEILDPERPHFTRKEIKNHWRLGCQCKV 114
>gi|304406958|ref|ZP_07388612.1| ferredoxin [Paenibacillus curdlanolyticus YK9]
gi|304343945|gb|EFM09785.1| ferredoxin [Paenibacillus curdlanolyticus YK9]
Length = 98
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L D+ L +++D +R GTC C + EG +LLG TD E ++L+ +
Sbjct: 18 GFTLLDLALKADVDWQFSCSR--------GTCARCRCLIEEGGDLLGEITDSEWDRLEPE 69
Query: 150 P--KNWRLACQTTVGTPD 165
+ +RL CQ TV + D
Sbjct: 70 EFDQGYRLGCQATVKSMD 87
>gi|281425670|ref|ZP_06256583.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oris F0302]
gi|299140783|ref|ZP_07033921.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oris C735]
gi|281400257|gb|EFB31088.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oris F0302]
gi|298577749|gb|EFI49617.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oris C735]
Length = 422
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G +CG C ++V+EG G D EK RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKLQVLEGG---GEILDSEKPHFTRKQIKDHWRLGCQCKV 114
>gi|260911934|ref|ZP_05918499.1| NADH:ubiquinone oxidoreductase subunit F [Prevotella sp. oral taxon
472 str. F0295]
gi|260633957|gb|EEX52082.1| NADH:ubiquinone oxidoreductase subunit F [Prevotella sp. oral taxon
472 str. F0295]
Length = 422
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C ++V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKLQVLEGG---GEILDSERSHFSRKEVKDHWRLGCQCKV 114
>gi|325579023|ref|ZP_08148979.1| ferredoxin [Haemophilus parainfluenzae ATCC 33392]
gi|345429689|ref|YP_004822807.1| [2Fe-2S] ferredoxin [Haemophilus parainfluenzae T3T1]
gi|301155750|emb|CBW15218.1| [2Fe-2S] ferredoxin [Haemophilus parainfluenzae T3T1]
gi|325159258|gb|EGC71392.1| ferredoxin [Haemophilus parainfluenzae ATCC 33392]
Length = 113
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V + E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNEASDQEEDMLDKAWGLEMDSRLSCQCVVGDED-----LVVEIPKYN 104
>gi|288928115|ref|ZP_06421962.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. oral taxon 317 str. F0108]
gi|288330949|gb|EFC69533.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. oral taxon 317 str. F0108]
Length = 422
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C ++V+EG G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKLQVLEGG---GEILDSERSHFSRKEVKDHWRLGCQCKV 114
>gi|448494445|ref|ZP_21609432.1| ferredoxin [Halorubrum californiensis DSM 19288]
gi|445689280|gb|ELZ41520.1| ferredoxin [Halorubrum californiensis DSM 19288]
Length = 104
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y L NC G G+CG+C V+V +G+ + + KEK +L
Sbjct: 16 GANLRDVLKEAGLSVYNGKMEQL-NCRGSGSCGSCAVQV-DGE--VSEPSKKEKARLWLP 71
Query: 150 P----KNWRLACQTTV 161
P + RL+CQT V
Sbjct: 72 PHHPSHDVRLSCQTKV 87
>gi|411118137|ref|ZP_11390518.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410711861|gb|EKQ69367.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 348
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKE---KLKRKPKNWRLACQTTVGTPDSTGL 169
C G C TC V ++EG+E RT E+E ++ +P+ RLACQT + L
Sbjct: 35 CGGNARCSTCRVVILEGQEYCAPRTPAEQELATQMGFEPR-VRLACQTAIAQQGKIAL 91
>gi|374619819|ref|ZP_09692353.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[gamma proteobacterium HIMB55]
gi|374303046|gb|EHQ57230.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[gamma proteobacterium HIMB55]
Length = 407
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQTTV 161
S C GGGTC C V EG GS E R+ N WRL+CQT V
Sbjct: 67 SACGGGGTCAQCKCVVAEGG---GSLLPTEATHFTRREANDGWRLSCQTPV 114
>gi|119357530|ref|YP_912174.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
gi|119354879|gb|ABL65750.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
Length = 355
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTVGTPDSTGLVVI 172
CAG G C C V V EG + L +D EK L ++ K RLACQ + + G+V +
Sbjct: 33 CAGQGICQACYVTVQEGADSLSPLSDVEKAFLSDRQIAKGGRLACQAVI---ERDGVVKV 89
Query: 173 QQLPE 177
PE
Sbjct: 90 LSRPE 94
>gi|448746709|ref|ZP_21728374.1| NADH-quinone reductase, Na(+)-translocating, F subunit [Halomonas
titanicae BH1]
gi|445565637|gb|ELY21746.1| NADH-quinone reductase, Na(+)-translocating, F subunit [Halomonas
titanicae BH1]
Length = 410
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ +T GG+ L + N G + S C GGG+C C V EG +
Sbjct: 43 NGDPEHTLKTQAGGKLLNTLAAN------GIFLS--SACGGGGSCAQCKCRVEEGGGSI- 93
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
T++ ++ K + WRL+CQ V
Sbjct: 94 LPTEESHFTMREKKEGWRLSCQVPV 118
>gi|297539156|ref|YP_003674925.1| ferredoxin, 2Fe-2S type, ISC system [Methylotenera versatilis 301]
gi|297258503|gb|ADI30348.1| ferredoxin, 2Fe-2S type, ISC system [Methylotenera versatilis 301]
Length = 113
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H L PDG I +T G + +++L ++ID+ C C TC V V E
Sbjct: 9 HVELCPDGAA-IEAKT---GDSICEVLLKNHIDID-------HACDQACACTTCHVIVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L D+E + L + N RL+CQ VGT D ++ ++P++
Sbjct: 58 GFKSLNPSDDQEDDLLDKAWGLEPNSRLSCQALVGTED-----LVVEIPKY 103
>gi|258647125|ref|ZP_05734594.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella tannerae ATCC 51259]
gi|260853083|gb|EEX72952.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella tannerae ATCC 51259]
Length = 424
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G+CG C V+V+EG G D EK RK + +RL CQ V
Sbjct: 68 SACGGKGSCGQCKVQVVEGG---GEILDVEKGHFTRKEIKEGFRLGCQCKV 115
>gi|424865875|ref|ZP_18289731.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86B]
gi|400758448|gb|EJP72655.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86B]
Length = 408
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
S C GGGTC C +++EG GS E+ + K + WRL+CQ V
Sbjct: 69 SACGGGGTCSQCKCQILEGG---GSILPTEESHFNSREKKEGWRLSCQVAV 116
>gi|34557734|ref|NP_907549.1| hypothetical protein WS1382 [Wolinella succinogenes DSM 1740]
gi|34483451|emb|CAE10449.1| hypothetical protein WS1382 [Wolinella succinogenes]
Length = 99
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTV 161
G CGTC++ V+EG E L +KEK+ L P N RL+CQ +
Sbjct: 43 GECGTCVITVVEGMEYLSPLNEKEKKVLSTMPDHTINSRLSCQMKI 88
>gi|373460461|ref|ZP_09552213.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella maculosa OT 289]
gi|371955681|gb|EHO73482.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella maculosa OT 289]
Length = 422
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G +CG C ++V+EG G D EK RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKLQVLEGG---GEILDSEKPHFTRKQIKDHWRLGCQCKV 114
>gi|419801258|ref|ZP_14326495.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK262]
gi|419844435|ref|ZP_14367724.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK2019]
gi|385193989|gb|EIF41335.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK262]
gi|386417346|gb|EIJ31831.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK2019]
Length = 113
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V + E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNEASDQEEDMLDKAWGLEMDSRLSCQCVVGDED-----LVVEIPKYN 104
>gi|379010426|ref|YP_005268238.1| corrinoid activation/regeneration protein [Acetobacterium woodii
DSM 1030]
gi|375301215|gb|AFA47349.1| corrinoid activation/regeneration protein [Acetobacterium woodii
DSM 1030]
Length = 606
Score = 40.0 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPL--SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK 147
G+KL ++ NS + A L +C G GTCG C V +I GK + +K+ ++
Sbjct: 9 GEKLIEVTSNSTLLEAASKAGMLIDGSCNGAGTCGKCKVRMIAGKPDELTAAEKKILTVE 68
Query: 148 RKPKNWRLACQTTV 161
+RLAC+T V
Sbjct: 69 EVEAGFRLACKTMV 82
>gi|423231423|ref|ZP_17217826.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T00C15]
gi|423246010|ref|ZP_17227083.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T12C06]
gi|392628309|gb|EIY22342.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T00C15]
gi|392637357|gb|EIY31230.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T12C06]
Length = 422
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C +V+EG G EK RK + +WRL CQ V
Sbjct: 66 SACGGKGSCGQCKCQVVEGG---GEILPSEKGHFSRKQQQDHWRLGCQVKV 113
>gi|456865546|gb|EMF83880.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
weilii serovar Topaz str. LT2116]
Length = 536
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 22/102 (21%)
Query: 64 VVNFAFVHSVLLPD-GTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTC 121
+VNF + LPD TP Q L +I L ++I P +N C G C
Sbjct: 3 LVNFENEKEISLPDNSTP----------QSLLEISLTNSI--------PHTNACGGNARC 44
Query: 122 GTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQ V
Sbjct: 45 STCRVLVLENPSNLSPPEQKEKDLSQKKGFPKSVRLACQAKV 86
>gi|374996396|ref|YP_004971895.1| metal-binding protein [Desulfosporosinus orientis DSM 765]
gi|357214762|gb|AET69380.1| putative metal-binding protein [Desulfosporosinus orientis DSM 765]
Length = 610
Score = 40.0 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVV 171
+S C G GTCG C V++ G + +K+ K+ W LACQ + D+T V
Sbjct: 33 ISTCGGKGTCGKCRVQITTGTPSQMTEIEKKFLKVSEWEAGWTLACQHIL-REDTT--VR 89
Query: 172 IQQLPE 177
+Q+L +
Sbjct: 90 VQELTD 95
>gi|150005746|ref|YP_001300490.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
vulgatus ATCC 8482]
gi|294777225|ref|ZP_06742681.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides vulgatus
PC510]
gi|319640917|ref|ZP_07995626.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
3_1_40A]
gi|149934170|gb|ABR40868.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides
vulgatus ATCC 8482]
gi|294448939|gb|EFG17483.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides vulgatus
PC510]
gi|317387436|gb|EFV68306.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
3_1_40A]
Length = 424
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C +V+EG G EK RK + +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGG---GEILPSEKGHFSRKQQQDHWRLGCQVKV 115
>gi|345519435|ref|ZP_08798858.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 4_3_47FAA]
gi|423314610|ref|ZP_17292543.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides vulgatus CL09T03C04]
gi|345457171|gb|EET15177.2| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 4_3_47FAA]
gi|392681939|gb|EIY75294.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides vulgatus CL09T03C04]
Length = 422
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C +V+EG G EK RK + +WRL CQ V
Sbjct: 66 SACGGKGSCGQCKCQVVEGG---GEILPSEKGHFSRKQQQDHWRLGCQVKV 113
>gi|326795833|ref|YP_004313653.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinomonas
mediterranea MMB-1]
gi|326546597|gb|ADZ91817.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinomonas
mediterranea MMB-1]
Length = 408
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
TA G KL + NS I L S C GGGTC C +V+ G GS E+
Sbjct: 48 TAPAGGKLLQTLANSGIFLS-------SACGGGGTCAQCKCKVMNGG---GSMLSTEQSH 97
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + +RL+CQ V
Sbjct: 98 FTRREEKEGFRLSCQVAV 115
>gi|307354687|ref|YP_003895738.1| ferredoxin [Methanoplanus petrolearius DSM 11571]
gi|307157920|gb|ADN37300.1| ferredoxin [Methanoplanus petrolearius DSM 11571]
Length = 612
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQTTV 161
+C G G CG C V++++ + T+KE++ LK +RLACQT +
Sbjct: 40 DCGGAGVCGKCRVQIVKLYGEVSDPTEKERDHLKDGEIAAGYRLACQTKI 89
>gi|229496272|ref|ZP_04389992.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, f subunit
[Porphyromonas endodontalis ATCC 35406]
gi|229316850|gb|EEN82763.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, f subunit
[Porphyromonas endodontalis ATCC 35406]
Length = 425
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C V+EG G EK RK + +WRL CQT V
Sbjct: 70 SACGGSGSCGQCRCRVVEGG---GEILPTEKGFFSRKEQKAHWRLGCQTKV 117
>gi|338998613|ref|ZP_08637285.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
TD01]
gi|338764530|gb|EGP19490.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
TD01]
Length = 410
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ +T GG+ L + N G + S C GGG+C C V EG +
Sbjct: 43 NGDPEHTLQTQAGGKLLNTLAAN------GIFLS--SACGGGGSCAQCKCRVEEGGGSI- 93
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
T++ ++ K + WRL+CQ V
Sbjct: 94 LPTEESHFTMREKKEGWRLSCQVPV 118
>gi|265753647|ref|ZP_06089002.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_33FAA]
gi|263235361|gb|EEZ20885.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_33FAA]
Length = 424
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C +V+EG G EK RK + +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGG---GEILPSEKGHFSRKQQQDHWRLGCQVKV 115
>gi|212693253|ref|ZP_03301381.1| hypothetical protein BACDOR_02764 [Bacteroides dorei DSM 17855]
gi|237709996|ref|ZP_04540477.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
9_1_42FAA]
gi|345515394|ref|ZP_08794896.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei 5_1_36/D4]
gi|423238456|ref|ZP_17219572.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL03T12C01]
gi|212664204|gb|EEB24776.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides dorei DSM
17855]
gi|229436026|gb|EEO46103.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei 5_1_36/D4]
gi|229456089|gb|EEO61810.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
9_1_42FAA]
gi|392648139|gb|EIY41829.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL03T12C01]
Length = 424
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C +V+EG G EK RK + +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGG---GEILPSEKGHFSRKQQQDHWRLGCQVKV 115
>gi|323345197|ref|ZP_08085420.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
oralis ATCC 33269]
gi|323093311|gb|EFZ35889.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
oralis ATCC 33269]
Length = 422
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C G +CG C V+V++G G D E+ RK +WRL CQ V
Sbjct: 67 SACGGKASCGQCKVQVLQGG---GEILDSERPHFSRKQIKDHWRLGCQCKV 114
>gi|206901120|ref|YP_002250448.1| 2Fe-2S iron-sulfur cluster binding domain protein [Dictyoglomus
thermophilum H-6-12]
gi|206740223|gb|ACI19281.1| 2Fe-2S iron-sulfur cluster binding domain protein [Dictyoglomus
thermophilum H-6-12]
Length = 576
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ L DI+ ++NI++ +S C G G CG C V++ GK + + T +EK+ L +
Sbjct: 18 GENLLDILRDNNINI-------VSLCNGVGWCGKCKVKIWSGK--VSALTGEEKKLLSDE 68
Query: 150 P--KNWRLACQTTVGTPDSTGLVVIQQLPEW---KGHEWKY 185
N RLACQ + D + ++++ + KG E+K+
Sbjct: 69 EIKNNIRLACQLCI--KDDLEIEILEKHDFFNFSKGLEYKF 107
>gi|149376576|ref|ZP_01894336.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
algicola DG893]
gi|149359094|gb|EDM47558.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
algicola DG893]
Length = 408
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 12/81 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T G KL + S I L S C GGGTC C +V+EG G+ E
Sbjct: 46 HTLTTEAGGKLLGTLAGSGIFLS-------SACGGGGTCAQCKCKVLEGG---GAMLPTE 95
Query: 143 KEKL--KRKPKNWRLACQTTV 161
K + + + WRL+CQ V
Sbjct: 96 KTHFTNREEKEGWRLSCQVPV 116
>gi|254514459|ref|ZP_05126520.1| NADH:ubiquinone oxidoreductase, F subunit [gamma proteobacterium
NOR5-3]
gi|219676702|gb|EED33067.1| NADH:ubiquinone oxidoreductase, F subunit [gamma proteobacterium
NOR5-3]
Length = 407
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + +N+ L S C GGGTC C V EG GS E+
Sbjct: 47 TVPAGGKLLQTLSEANVFL-------ASACGGGGTCAQCKCIVNEGG---GSMLPTEESH 96
Query: 146 LKRK--PKNWRLACQTTV 161
R+ WRL+CQT V
Sbjct: 97 FTRRDAADGWRLSCQTAV 114
>gi|357061295|ref|ZP_09122053.1| NADH:ubiquinone oxidoreductase [Alloprevotella rava F0323]
gi|355374636|gb|EHG21929.1| NADH:ubiquinone oxidoreductase [Alloprevotella rava F0323]
Length = 424
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 11/63 (17%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQT------TVGTP 164
S C G G+CG C +V+ G G D EK RK +N+RL+CQ +V P
Sbjct: 68 SACGGKGSCGQCKCQVVNGG---GEILDVEKGHFSRKEIKENYRLSCQVKVKGDMSVKVP 124
Query: 165 DST 167
DS
Sbjct: 125 DSV 127
>gi|395222708|ref|ZP_10403174.1| ferredoxin [Pontibacter sp. BAB1700]
gi|394452897|gb|EJF08015.1| ferredoxin [Pontibacter sp. BAB1700]
Length = 74
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGL 169
+ C G C TC + V EG E G TD E+ +R N RL CQ T+ + D+ G
Sbjct: 1 MHACGAKGRCTTCRIIVQEGLEHFGPLTDSEQRYRERGRLQANERLTCQCTLVSGDAQGR 60
Query: 170 VVIQ-QLPEWK 179
V Q LP K
Sbjct: 61 VPRQTMLPHMK 71
>gi|372273351|ref|ZP_09509399.1| Na(+)-translocating NADH-quinone reductase subunit F
[Marinobacterium stanieri S30]
Length = 410
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSR--TDKEK 143
T G KL + + I L S C GGGTC C +V EG GS T++
Sbjct: 50 TVPAGGKLLQTLADKGIFL-------ASACGGGGTCAQCKCQVTEGG---GSMLPTEESH 99
Query: 144 EKLKRKPKNWRLACQTTV 161
L+ + WRL+CQ V
Sbjct: 100 FTLREGKEGWRLSCQVAV 117
>gi|251792928|ref|YP_003007654.1| 2Fe-2S type ferredoxin [Aggregatibacter aphrophilus NJ8700]
gi|422336473|ref|ZP_16417446.1| 2Fe-2S ferredoxin [Aggregatibacter aphrophilus F0387]
gi|247534321|gb|ACS97567.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter aphrophilus
NJ8700]
gi|353346659|gb|EHB90944.1| 2Fe-2S ferredoxin [Aggregatibacter aphrophilus F0387]
Length = 113
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V V E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIH-------HACDGSCACTTCHVVVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GGDSLNEPSDQEEDMLDKAWGLEMDSRLSCQCIVGDED-----LVVEIPKYN 104
>gi|21673483|ref|NP_661548.1| chlorosome envelope protein J [Chlorobium tepidum TLS]
gi|13878451|sp|O68983.1|CSMJ_CHLTE RecName: Full=Chlorosome protein J
gi|3089164|gb|AAC14870.1| chlorosome envelope protein J [Chlorobaculum tepidum]
gi|21646589|gb|AAM71890.1| chlorosome envelope protein J [Chlorobium tepidum TLS]
Length = 225
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C G G C +C V V+EG E L + EK + K + RLAC+TT+
Sbjct: 33 CGGNGICQSCFVYVLEGAECLSEPGEDEKAFISDKLFAEGGRLACRTTI 81
>gi|227823018|ref|YP_002826990.1| adenylate cyclase [Sinorhizobium fredii NGR234]
gi|227342019|gb|ACP26237.1| adenylate cyclase [Sinorhizobium fredii NGR234]
Length = 558
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ-------TTVG 162
+S C G G C TC V VIEG + + E+ L R P N RLACQ T V
Sbjct: 281 VSICGGRGRCSTCRVRVIEGLDGQPAPETAERATLTRIGAPDNVRLACQFRPTQNVTVVP 340
Query: 163 TPDSTGLVVIQQLPEWKG 180
D+ L + QL G
Sbjct: 341 ILDTDSLGIKTQLARQNG 358
>gi|393774739|ref|ZP_10363093.1| 2Fe-2S ferredoxin [Novosphingobium sp. Rr 2-17]
gi|392719805|gb|EIZ77316.1| 2Fe-2S ferredoxin [Novosphingobium sp. Rr 2-17]
Length = 99
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G L ++L S+ R NC G TCGTC + V+EG++ + +E EKL
Sbjct: 15 ATAGASLLSLILASD-------ERIQHNCDGKATCGTCHIFVLEGRKGVSKIAREENEKL 67
Query: 147 KRKP---KNWRLACQT-TVGTPDST 167
RLACQ +GT D T
Sbjct: 68 DAVVGVGSKSRLACQAFFLGTEDVT 92
>gi|359299810|ref|ZP_09185649.1| 2Fe-2S ferredoxin [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305615|ref|ZP_10824674.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sputorum HK 2154]
gi|400376728|gb|EJP29615.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sputorum HK 2154]
Length = 113
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 24 GDNLLELAHNAGVEIHHA-------CDGSCACTTCHVVIREGYDSLNETTDQEEDMLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ RL+CQ VG D ++ ++P++
Sbjct: 77 WGLEMDSRLSCQCVVGDED-----LVVEIPKY 103
>gi|307250166|ref|ZP_07532125.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306857797|gb|EFM89894.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
Length = 121
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 32 GDNLLELAHNAGVEIHNA-------CDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKA 84
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ RL+CQ VG D LVV ++P++
Sbjct: 85 WGLEMDSRLSCQCVVGEED---LVV--EIPKY 111
>gi|219848207|ref|YP_002462640.1| ferredoxin [Chloroflexus aggregans DSM 9485]
gi|219542466|gb|ACL24204.1| ferredoxin [Chloroflexus aggregans DSM 9485]
Length = 205
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
C G G C TC V+V+ G E L T+ EK + +R + WRL CQ V
Sbjct: 34 CNGTGFCQTCKVKVLAGSESLNPPTELEKNWIPEQRLQEGWRLGCQAAV 82
>gi|15618279|ref|NP_224564.1| ferredoxin IV [Chlamydophila pneumoniae CWL029]
gi|15835897|ref|NP_300421.1| ferredoxin IV [Chlamydophila pneumoniae J138]
gi|16752675|ref|NP_444942.1| ferredoxin [Chlamydophila pneumoniae AR39]
gi|33241707|ref|NP_876648.1| ferredoxin IV [Chlamydophila pneumoniae TW-183]
gi|384449377|ref|YP_005661979.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydophila pneumoniae LPCoLN]
gi|4376640|gb|AAD18508.1| Ferredoxin IV [Chlamydophila pneumoniae CWL029]
gi|7189318|gb|AAF38239.1| ferredoxin [Chlamydophila pneumoniae AR39]
gi|8978736|dbj|BAA98572.1| ferredoxin IV [Chlamydophila pneumoniae J138]
gi|33236216|gb|AAP98305.1| ferredoxin IV [Chlamydophila pneumoniae TW-183]
gi|269303239|gb|ACZ33339.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydophila
pneumoniae LPCoLN]
Length = 91
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC++EV+EG+E L T+ E + L + N RLACQ +
Sbjct: 39 GVCGTCVIEVLEGRENLSEFTEPEYDFLGEPEDSNERLACQCRI 82
>gi|417781361|ref|ZP_12429113.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
weilii str. 2006001853]
gi|410778612|gb|EKR63238.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
weilii str. 2006001853]
Length = 536
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSN-CAGGGTCG 122
+VNF + LPD + Q L +I L + I P +N C G C
Sbjct: 3 LVNFENEKEISLPDNSAP---------QSLLEISLTNGI--------PHTNACGGNARCS 45
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
TC V V+E L KEK+ ++K PK+ RLACQ V
Sbjct: 46 TCRVLVLENSSNLSPPEQKEKDLSQKKGFPKSVRLACQAKV 86
>gi|145628728|ref|ZP_01784528.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 22.1-21]
gi|145631825|ref|ZP_01787584.1| ferredoxin, 2Fe-2S [Haemophilus influenzae R3021]
gi|144979198|gb|EDJ88884.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 22.1-21]
gi|144982544|gb|EDJ90098.1| ferredoxin, 2Fe-2S [Haemophilus influenzae R3021]
Length = 97
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V V EG + L +D+E++ L +
Sbjct: 8 GDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVIVREGFDSLNETSDQEEDMLDKA 60
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+ RL+CQ VG D LVV ++P++
Sbjct: 61 WGLEMDSRLSCQCVVGNED---LVV--EIPKYN 88
>gi|448392752|ref|ZP_21567382.1| ferredoxin [Haloterrigena salina JCM 13891]
gi|445664071|gb|ELZ16791.1| ferredoxin [Haloterrigena salina JCM 13891]
Length = 123
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P I FR C G+ LRD++L ++ + A L NC G GTCGTC V IEG
Sbjct: 2 PTIEFRGREIECERGRILRDVLLEADESPHNGGANWL-NCRGHGTCGTCAV-AIEGD--A 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
T E+ +L P + RL+CQT V
Sbjct: 58 SEPTAAERRRLAIPPHDPDAGLRLSCQTRV 87
>gi|343519060|ref|ZP_08756045.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus pittmaniae HK 85]
gi|343392826|gb|EGV05386.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus pittmaniae HK 85]
Length = 120
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G L ++ N+ ++++ C G C TC V + EG + L +D+E++ L
Sbjct: 28 AAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNEASDQEEDML 80
Query: 147 KRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ + RL+CQ VG D LVV ++P++
Sbjct: 81 DKAWGLEMDSRLSCQCIVGEED---LVV--EIPKY 110
>gi|452207992|ref|YP_007488114.1| ferredoxin (2Fe-2S) [Natronomonas moolapensis 8.8.11]
gi|452084092|emb|CCQ37425.1| ferredoxin (2Fe-2S) [Natronomonas moolapensis 8.8.11]
Length = 112
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE 133
G LRD++ + + +YG +R ++NC G G CGTC V V EG E
Sbjct: 23 GAILRDVLRSHGVAVYGSVSR-VANCGGRGLCGTCGVRV-EGAE 64
>gi|342904033|ref|ZP_08725835.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
gi|342904665|ref|ZP_08726464.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
gi|417840462|ref|ZP_12486595.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19107]
gi|417840786|ref|ZP_12486894.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19501]
gi|417843011|ref|ZP_12489088.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21127]
gi|341948177|gb|EGT74810.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19107]
gi|341950245|gb|EGT76834.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21127]
gi|341950597|gb|EGT77184.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19501]
gi|341953086|gb|EGT79600.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
gi|341954042|gb|EGT80536.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
Length = 113
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V + E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVIIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGDED-----LVVEIPKYN 104
>gi|152995742|ref|YP_001340577.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinomonas
sp. MWYL1]
gi|189030473|sp|A6VW13.1|NQRF_MARMS RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|150836666|gb|ABR70642.1| NADH:ubiquinone oxidoreductase, subunit F [Marinomonas sp. MWYL1]
Length = 408
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
TA G KL + NS I L S C GGGTC C +V G GS E+
Sbjct: 48 TAPAGGKLLQTLANSGIFLS-------SACGGGGTCAQCKCKVTSGG---GSMLSTEQSH 97
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + +RL+CQ +V
Sbjct: 98 FTRRDEKEGYRLSCQVSV 115
>gi|307544810|ref|YP_003897289.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
elongata DSM 2581]
gi|307216834|emb|CBV42104.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
elongata DSM 2581]
Length = 410
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ T GG+ L + N G + S C GGG+C C V EG +
Sbjct: 43 NGDPEHTLTTQAGGKLLNTLAAN------GIFLS--SACGGGGSCAQCRCRVEEGGGSI- 93
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
T++ L+ K + WRL+CQ V
Sbjct: 94 LPTEESHFTLREKKEGWRLSCQVPV 118
>gi|375014013|ref|YP_004991001.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Owenweeksia hongkongensis DSM 17368]
gi|359349937|gb|AEV34356.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Owenweeksia hongkongensis DSM 17368]
Length = 437
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C GGGTC C +V++G G E RK NWRL CQ V
Sbjct: 71 SACGGGGTCAMCKCQVLDGG---GEILPTEAPYFTRKEIADNWRLGCQVKV 118
>gi|46446718|ref|YP_008083.1| ferredoxin [2Fe-2S] 4 [Candidatus Protochlamydia amoebophila UWE25]
gi|46400359|emb|CAF23808.1| putative ferredoxin [2Fe-2S] 4 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 88
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
G CGTC++EV EGKE L T +E++ L + RLACQ +
Sbjct: 37 GVCGTCVIEVKEGKENLSPPTKEEEDFLGEGTCHERLACQCRI 79
>gi|379729235|ref|YP_005321431.1| ferredoxin [Saprospira grandis str. Lewin]
gi|378574846|gb|AFC23847.1| ferredoxin [Saprospira grandis str. Lewin]
Length = 112
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPK-NWRLACQTTVGTPDSTGLV 170
NC C TC V + EG++ L +D+E++ + R P+ RLACQ + D+ V
Sbjct: 40 NCGRVCACSTCHVYIEEGEDSLPEISDREEDFIDRALDPRIESRLACQCIIQEDDAVIEV 99
Query: 171 VIQQLPEWKGHE 182
++ GHE
Sbjct: 100 LVPDQTRIIGHE 111
>gi|126664944|ref|ZP_01735927.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. ELB17]
gi|126630314|gb|EBA00929.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. ELB17]
Length = 408
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ +T GG KL + + S I L S C GGGTC C +V EG + + T
Sbjct: 44 PEHTVKTEAGG-KLLNTLSGSGIFLS-------SACGGGGTCAQCKCKVFEGGGAMLA-T 94
Query: 140 DKEKEKLKRKPKNWRLACQTTV 161
+K + + + WRL+CQ V
Sbjct: 95 EKTHFTNREEKEGWRLSCQVPV 116
>gi|451979650|ref|ZP_21928065.1| putative Ferredoxin [Nitrospina gracilis 3/211]
gi|451763178|emb|CCQ89262.1| putative Ferredoxin [Nitrospina gracilis 3/211]
Length = 101
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 84 FRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEK 143
F+ GG LR + +I LY +NC G G+CGTC+VE IE E +
Sbjct: 17 FKVGYGGN-LRKAAQHHDISLYRG-LHEYTNCHGMGSCGTCLVE-IEPMEHVNDHG--LI 71
Query: 144 EKLKRKPKNWRLACQTTV 161
EKL + N +LAC+T V
Sbjct: 72 EKLHKINGNRKLACRTKV 89
>gi|168704222|ref|ZP_02736499.1| ferredoxin [Gemmata obscuriglobus UQM 2246]
Length = 140
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTV-GTPDSTGL 169
+C G C TC V V +G + TD E+++L + P + RLACQ GT D L
Sbjct: 67 SCGGVCACSTCHVHVQKGGSSCSNATDDEEDELDQAPALSPDSRLACQCVPNGTQD---L 123
Query: 170 VVIQQLPEWKGHEWK 184
+V+ +P+W +E K
Sbjct: 124 IVL--IPKWNRNEVK 136
>gi|193222371|emb|CAL62368.1| 2Fe-2S ferredoxin [Herminiimonas arsenicoxydans]
Length = 112
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 42/101 (41%), Gaps = 20/101 (19%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H L PDG A G+ + D++L ++ID+ C C TC V V E
Sbjct: 9 HHALCPDGA----VIDAPAGKSICDVLLENDIDIEHA-------CEKSCACTTCHVIVRE 57
Query: 131 GKELLGSRTDKEKEKLKRKPKNW------RLACQTTVGTPD 165
G L +KE++ L K W RL+CQ V D
Sbjct: 58 GFSSLNEAEEKEEDLLD---KAWGLEAASRLSCQAIVADED 95
>gi|189462709|ref|ZP_03011494.1| hypothetical protein BACCOP_03406 [Bacteroides coprocola DSM 17136]
gi|189430578|gb|EDU99562.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides coprocola
DSM 17136]
Length = 422
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K ++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGGGEILPSEVSHFSRKQQK--DHWRLGCQVKV 115
>gi|194337174|ref|YP_002018968.1| ferredoxin [Pelodictyon phaeoclathratiforme BU-1]
gi|194309651|gb|ACF44351.1| ferredoxin [Pelodictyon phaeoclathratiforme BU-1]
Length = 205
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
C G G C TC V V+EG ELL +++EK L + R+ C V P + ++
Sbjct: 33 CGGNGICQTCYVRVLEGSELLSPLSEEEKALLSDALLSEGTRMGCMAKVEKPGTIRII 90
>gi|407276424|ref|ZP_11104894.1| 2Fe-2S ferredoxin [Rhodococcus sp. P14]
Length = 106
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 74 LLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV-IEGK 132
L+PDGT H GQ + D + +N L G A C G +C TC V V E
Sbjct: 7 LVPDGT--THIVDVPAGQSIMDGSVRNN--LPGIVAE----CGGSCSCATCHVHVDSEFA 58
Query: 133 ELLGSRTDKEKEKLKRK---PKNWRLACQTTVG---------TPDSTG 168
+L G TD+E++ L+ + RL+CQ V PDS G
Sbjct: 59 DLFGEATDEERDLLEYADDVDERSRLSCQLIVNAACEGVRVIVPDSNG 106
>gi|152978545|ref|YP_001344174.1| ferredoxin, 2Fe-2S type, ISC system [Actinobacillus succinogenes
130Z]
gi|150840268|gb|ABR74239.1| ferredoxin, 2Fe-2S type, ISC system [Actinobacillus succinogenes
130Z]
Length = 113
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
V LP+ P+ A G L ++ N+ ++++ C G C TC V + E
Sbjct: 5 VFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + RL+CQ +G D LVV ++P++
Sbjct: 58 GYDSLNETSDQEEDMLDKAWGLEMESRLSCQCVIGDED---LVV--EIPKYN 104
>gi|83645468|ref|YP_433903.1| Na(+)-translocating NADH-quinone reductase subunit F [Hahella
chejuensis KCTC 2396]
gi|83633511|gb|ABC29478.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Hahella chejuensis KCTC 2396]
Length = 408
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P +T GG+ L+ L G S C GGG+C C +V +G G
Sbjct: 41 NGDPKHTIKTPAGGKLLQT--------LAGEGVFLSSACGGGGSCAQCKCKVFDGG---G 89
Query: 137 SRTDKEKEKLKRKP--KNWRLACQTTV 161
S E+ R+ + WRL+CQ V
Sbjct: 90 SMLPTERAHFTRREEKEGWRLSCQVAV 116
>gi|163793955|ref|ZP_02187929.1| putative adenylate cyclase transmembrane protein [alpha
proteobacterium BAL199]
gi|159181066|gb|EDP65583.1| putative adenylate cyclase transmembrane protein [alpha
proteobacterium BAL199]
Length = 433
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQTTVGTPDSTGLV 170
S C G G C TC + + E L ++ E + L+R P N RLACQT V GL
Sbjct: 160 SVCGGRGRCSTCRIRIGARLEALPEPSEAEAKVLRRIAAPPNVRLACQTVV----IDGLE 215
Query: 171 VIQQLP 176
V+ LP
Sbjct: 216 VMPLLP 221
>gi|322369289|ref|ZP_08043854.1| ferredoxin [Haladaptatus paucihalophilus DX253]
gi|320551021|gb|EFW92670.1| ferredoxin [Haladaptatus paucihalophilus DX253]
Length = 106
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+++L ++ + A L NC G CGTC VEV EG + + E+ +L +
Sbjct: 16 GSVLRNVLLAADETPHNGSAHYL-NCRGNAVCGTCAVEV-EGD--VSEQKSSERNRLSKP 71
Query: 150 PKN----WRLACQTTV 161
P + RLACQT V
Sbjct: 72 PHDPESGLRLACQTRV 87
>gi|313675395|ref|YP_004053391.1| ferredoxin [Marivirga tractuosa DSM 4126]
gi|312942093|gb|ADR21283.1| ferredoxin [Marivirga tractuosa DSM 4126]
Length = 108
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDSTG 168
L+ C G C TC V+V E + L D+E ++L P N RLACQ + PD G
Sbjct: 40 LATCGGMALCATCHVKVEERFDDLDEPGDQEMDQLDILPNAEHNSRLACQLRL-HPDMDG 98
Query: 169 LVV 171
++V
Sbjct: 99 IMV 101
>gi|198274583|ref|ZP_03207115.1| hypothetical protein BACPLE_00735 [Bacteroides plebeius DSM 17135]
gi|198272030|gb|EDY96299.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides plebeius DSM
17135]
Length = 422
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K ++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGGGEILPSEVSHFSRKQQK--DHWRLGCQVKV 115
>gi|417844944|ref|ZP_12490980.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21639]
gi|341956145|gb|EGT82584.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21639]
Length = 113
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V + E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVIIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGDED-----LVIEIPKYN 104
>gi|307256977|ref|ZP_07538753.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|307263589|ref|ZP_07545203.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|306864461|gb|EFM96368.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306871052|gb|EFN02782.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 121
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 32 GDNLLELAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKA 84
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ RL+CQ VG D LVV ++P++
Sbjct: 85 WGLEMDSRLSCQCVVGEED---LVV--EIPKY 111
>gi|219851931|ref|YP_002466363.1| ferredoxin [Methanosphaerula palustris E1-9c]
gi|219546190|gb|ACL16640.1| ferredoxin [Methanosphaerula palustris E1-9c]
Length = 538
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 10/90 (11%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
V +V L D D HF GQ LR+I+ +++I R + C G G CG C + +
Sbjct: 3 VLTVRLEDRVVDTHF---VAGQSLREILDSTDI-------RVRAGCNGSGACGLCRIRIE 52
Query: 130 EGKELLGSRTDKEKEKLKRKPKNWRLACQT 159
G + ++ + + RLACQ
Sbjct: 53 SGNVHKPTEIERSILDSSLRAQGVRLACQV 82
>gi|322514673|ref|ZP_08067701.1| ferredoxin [Actinobacillus ureae ATCC 25976]
gi|322119371|gb|EFX91480.1| ferredoxin [Actinobacillus ureae ATCC 25976]
Length = 113
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 24 GDNLLELAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ RL+CQ VG D ++ ++P++
Sbjct: 77 WGLEMDSRLSCQCVVGEED-----LVVEIPKY 103
>gi|224023677|ref|ZP_03642043.1| hypothetical protein BACCOPRO_00391 [Bacteroides coprophilus DSM
18228]
gi|224016899|gb|EEF74911.1| hypothetical protein BACCOPRO_00391 [Bacteroides coprophilus DSM
18228]
Length = 422
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K ++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEVSHFSRKQQK--DHWRLGCQVKV 115
>gi|119356705|ref|YP_911349.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
gi|119354054|gb|ABL64925.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
Length = 236
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
C G G C TC V+V+EG ELL ++ EK L + R+AC T+ P + ++
Sbjct: 47 CGGNGICQTCYVKVLEGGELLSPLSEPEKAMLSDTLIREGTRMACLATIEKPGTIKIL 104
>gi|410446623|ref|ZP_11300726.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86E]
gi|409980295|gb|EKO37046.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86E]
Length = 410
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
S C GGGTC C ++ EG GS E+ K K WRL+CQ V
Sbjct: 69 SACGGGGTCSQCKCQIAEGG---GSILPTEESHFNSKEKKDGWRLSCQVAV 116
>gi|410479993|ref|YP_006767630.1| ferredoxin [Leptospirillum ferriphilum ML-04]
gi|424866614|ref|ZP_18290446.1| Ferredoxin [Leptospirillum sp. Group II 'C75']
gi|124516574|gb|EAY58082.1| Ferredoxin [Leptospirillum rubarum]
gi|387222703|gb|EIJ77122.1| Ferredoxin [Leptospirillum sp. Group II 'C75']
gi|406775245|gb|AFS54670.1| ferredoxin [Leptospirillum ferriphilum ML-04]
Length = 109
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEK--EKLKRKPKNWRLACQTTVGTPDST 167
C G CGTC V V EG + L R KE K + RL CQT +G+ D T
Sbjct: 36 CGGNAACGTCTVVVKEGADSLKPRNAKESFLAKAMMLGDDQRLGCQTEMGSGDLT 90
>gi|399155914|ref|ZP_10755981.1| 2Fe-2S ferredoxin [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 135
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP---KNWRLACQTTVGTPDSTGLV 170
+C G C TC V V +G E TD E++ L P RLACQ P+ T +
Sbjct: 63 SCGGVCACSTCHVIVRQGLESCNEATDDEEDMLDLAPGLEPQSRLACQC---VPNGTQAL 119
Query: 171 VIQQLPEW 178
+I ++PEW
Sbjct: 120 II-EIPEW 126
>gi|289937571|ref|YP_003482173.1| ferredoxin [Natrialba magadii ATCC 43099]
gi|448283778|ref|ZP_21475044.1| ferredoxin [Natrialba magadii ATCC 43099]
gi|289533262|gb|ADD07611.1| ferredoxin [Natrialba magadii ATCC 43099]
gi|445572550|gb|ELY27087.1| ferredoxin [Natrialba magadii ATCC 43099]
Length = 117
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++L ++ + A L NC G GTCGTC V + G+ +G +E+ +L
Sbjct: 16 GAVLRDVLLRADESPHNGRADAL-NCRGLGTCGTCAV-AVSGE--VGEPGPRERLRLSTP 71
Query: 150 PKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYKK 187
P + RLACQ V LVV + W H + +K
Sbjct: 72 PHDADSGLRLACQVRV----EDDLVVEKYPGFWGQHTDRTEK 109
>gi|148651912|ref|YP_001279005.1| Na(+)-translocating NADH-quinone reductase subunit F [Psychrobacter
sp. PRwf-1]
gi|148570996|gb|ABQ93055.1| NADH:ubiquinone oxidoreductase, subunit F [Psychrobacter sp.
PRwf-1]
Length = 412
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G PD T GG KL + + I L S C GGGTC C +VIEG G
Sbjct: 43 NGNPDNDVVTPAGG-KLLQTLASEGIFLS-------SACGGGGTCAQCRCKVIEGG---G 91
Query: 137 SRTDKEKEKLKRKP--KNWRLACQTTV 161
S E+ + N RLACQ V
Sbjct: 92 SILPTEEGHFTQGEIRDNMRLACQVAV 118
>gi|53729020|ref|ZP_00134288.2| COG0633: Ferredoxin [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307245835|ref|ZP_07527920.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307247911|ref|ZP_07529945.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307252549|ref|ZP_07534444.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307254808|ref|ZP_07536634.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259250|ref|ZP_07540979.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306853195|gb|EFM85415.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306855561|gb|EFM87730.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306859954|gb|EFM91972.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306862179|gb|EFM94147.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866617|gb|EFM98476.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 121
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 32 GDNLLELAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKA 84
Query: 150 ---PKNWRLACQTTVGTPD 165
+ RL+CQ VG D
Sbjct: 85 WGLEMDSRLSCQCVVGEED 103
>gi|190150251|ref|YP_001968776.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189915382|gb|ACE61634.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 113
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 24 GDNLLELAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ RL+CQ VG D ++ ++P++
Sbjct: 77 WGLEMDSRLSCQCVVGEED-----LVVEIPKY 103
>gi|33243012|gb|AAQ01176.1| ferredoxin [Tritrichomonas foetus]
Length = 108
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 111 PLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
P C G CG C+V+V+ G + + D+EKE L P RLAC ++
Sbjct: 48 PEGTCNGNVACGKCLVKVVSGN--VAAAEDEEKELLDGAPAGARLACAISL 96
>gi|126208400|ref|YP_001053625.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165976343|ref|YP_001651936.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|303251405|ref|ZP_07337582.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|303252967|ref|ZP_07339122.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|407691994|ref|YP_006816783.1| ferredoxin [Actinobacillus suis H91-0380]
gi|126097192|gb|ABN74020.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165876444|gb|ABY69492.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|302648158|gb|EFL78359.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302649759|gb|EFL79938.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|407388051|gb|AFU18544.1| ferredoxin [Actinobacillus suis H91-0380]
Length = 113
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 24 GDNLLELAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ RL+CQ VG D ++ ++P++
Sbjct: 77 WGLEMDSRLSCQCVVGEED-----LVVEIPKY 103
>gi|307261409|ref|ZP_07543083.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306868899|gb|EFN00702.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 121
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L TD+E++ L +
Sbjct: 32 GDNLLELAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNETTDQEEDMLDKA 84
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
+ RL+CQ VG D LVV ++P++
Sbjct: 85 WGLEMDSRLSCQCVVGEED---LVV--EIPKY 111
>gi|149275896|ref|ZP_01882041.1| ferredoxin, 2Fe-2S [Pedobacter sp. BAL39]
gi|149233324|gb|EDM38698.1| ferredoxin, 2Fe-2S [Pedobacter sp. BAL39]
Length = 110
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR- 148
G+ + ++ L++ I+L NC G C TC V V +G + L +DKE++ + R
Sbjct: 25 GESVLEVCLDNGIELQ-------HNCGGVCGCSTCHVYVNKGMDDLQEISDKEEDFIDRA 77
Query: 149 -KPK-NWRLACQTTVGTPDSTGLVVIQQLPEWKGH 181
+PK RL CQ V + D V I E+ GH
Sbjct: 78 VRPKITSRLGCQCVVISGDIE--VTIPDQSEFLGH 110
>gi|383785609|ref|YP_005470179.1| ferredoxin, 2Fe-2S [Leptospirillum ferrooxidans C2-3]
gi|383084522|dbj|BAM08049.1| ferredoxin, 2Fe-2S [Leptospirillum ferrooxidans C2-3]
Length = 109
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEK--EKLKRKPKNWRLACQTTVGTPDST 167
C G CGTC + + EG E L R KE K + RLACQT +G+ D T
Sbjct: 36 CGGNAACGTCNLIIKEGAETLKPRNAKEGFLAKAMMLADDNRLACQTEMGSGDLT 90
>gi|448454947|ref|ZP_21594349.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
gi|445814327|gb|EMA64292.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
Length = 116
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR +L + + Y R L NC G G C TC V + EG + ++L +
Sbjct: 27 GRNLRRALLEAGLSPYAAATRRL-NCGGRGLCATCGVRIREGPA-----PEHWHDRLADR 80
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ TV P + LV
Sbjct: 81 FGYPRLSCQVTVDGPMTVELV 101
>gi|448411041|ref|ZP_21575583.1| hypothetical protein C475_14673 [Halosimplex carlsbadense 2-9-1]
gi|445670930|gb|ELZ23526.1| hypothetical protein C475_14673 [Halosimplex carlsbadense 2-9-1]
Length = 113
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+++L++ + + A+ + NC G GTCGTC V V + T +E+ +L
Sbjct: 16 GDILREVLLDAGVVPHNGNAKRV-NCRGHGTCGTCAVAV---DGPTSAPTARERWRLDFP 71
Query: 150 PKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGH 181
P + RLACQT V G + + + P + G
Sbjct: 72 PHDAGTGLRLACQTRV-----EGDLTVAKFPGFWGQ 102
>gi|404486531|ref|ZP_11021721.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Barnesiella intestinihominis YIT 11860]
gi|404336349|gb|EJZ62810.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Barnesiella intestinihominis YIT 11860]
Length = 422
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C GGG+C C +V+EG G E+ RK + +WRL CQ V
Sbjct: 67 SACGGGGSCAQCRCQVLEGG---GEILPTEQVHFSRKQQLNHWRLGCQVKV 114
>gi|399544109|ref|YP_006557417.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. BSs20148]
gi|399159441|gb|AFP30004.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. BSs20148]
Length = 408
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ +T GG KL + + S I L S C GGGTC C +V EG + + T
Sbjct: 44 PEHTVQTEAGG-KLLNTLSGSGIFLS-------SACGGGGTCAQCKCKVFEGGGAMLA-T 94
Query: 140 DKEKEKLKRKPKNWRLACQTTV 161
+K + + + WRL+CQ V
Sbjct: 95 EKTHFTNREEKEGWRLSCQVPV 116
>gi|78044449|ref|YP_360062.1| iron-sulfur cluster binding protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|383280344|pdb|3ZYY|X Chain X, Reductive Activator For Corrinoid,Iron-Sulfur Protein
gi|383280345|pdb|3ZYY|Y Chain Y, Reductive Activator For Corrinoid,Iron-Sulfur Protein
gi|77996564|gb|ABB15463.1| iron-sulfur cluster binding protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 631
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQT 159
C G GTCG C+V V++G++ + S ++E++ + + LACQT
Sbjct: 38 CGGAGTCGKCLVRVVDGQKRVESYGKLKQEEI---AQGYVLACQT 79
>gi|409198108|ref|ZP_11226771.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinilabilia
salmonicolor JCM 21150]
Length = 419
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C GGGTC C +V +G GS E RK + +WRLACQ V
Sbjct: 74 SACGGGGTCAMCRCQVHDGA---GSILPTETGYFTRKEQAADWRLACQVKV 121
>gi|284118230|ref|ZP_06386763.1| ferredoxin [Candidatus Poribacteria sp. WGA-A3]
gi|283829466|gb|EFC33836.1| ferredoxin [Candidatus Poribacteria sp. WGA-A3]
Length = 115
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN---WRLACQTTVGTPDSTGLV 170
+C G +C TC VEVI G + L +E++ L R+ RL+CQ V G V
Sbjct: 36 DCGGSASCSTCRVEVIAGGDHLSEIDFEEQDLLDREALTEPYHRLSCQAMV-----LGDV 90
Query: 171 VIQQLPEWK 179
V+ Q+PE K
Sbjct: 91 VV-QVPEEK 98
>gi|448716288|ref|ZP_21702531.1| ferredoxin [Halobiforma nitratireducens JCM 10879]
gi|445787114|gb|EMA37864.1| ferredoxin [Halobiforma nitratireducens JCM 10879]
Length = 116
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR+++L ++ + A L NC G G+CGTC V + G+ +G+ +E+ +L
Sbjct: 16 GAVLRNVLLRADESPHNGRADTL-NCRGLGSCGTCAV-AVSGE--VGAAGPRERLRLSIP 71
Query: 150 PKN----WRLACQTTVGTPDSTGLVVIQQLPE-WKGHEWKYKKIPTSELP 194
P + RLACQ V +V+++ PE W H + + +E P
Sbjct: 72 PHDTESGLRLACQLRVEDD-----LVVEKYPEFWGQHTERAGEQADTEEP 116
>gi|217969247|ref|YP_002354481.1| Na(+)-translocating NADH-quinone reductase subunit F [Thauera sp.
MZ1T]
gi|217506574|gb|ACK53585.1| NADH:ubiquinone oxidoreductase, subunit F [Thauera sp. MZ1T]
Length = 407
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C GGGTC C V+EG GS E+ ++ + WRL+CQT V
Sbjct: 67 SACGGGGTCAQCKCVVMEGG---GSMLPTEESHFTKRDAKEGWRLSCQTPV 114
>gi|194333599|ref|YP_002015459.1| ferredoxin [Prosthecochloris aestuarii DSM 271]
gi|194311417|gb|ACF45812.1| ferredoxin [Prosthecochloris aestuarii DSM 271]
Length = 277
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
C G G C TC V V +G +LL +D+EK L + R+AC TT+ P + L+
Sbjct: 91 CGGNGLCQTCYVRVNKGMDLLSPLSDREKALLSDTLIKEGTRVACLTTLDKPGTLELL 148
>gi|443695410|gb|ELT96328.1| hypothetical protein CAPTEDRAFT_187825 [Capitella teleta]
Length = 398
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE-GKELLGSR 138
P+ TA GG+ L + S ++ P S C GGGTC C +V+ G E+L
Sbjct: 34 PEKGVTTAAGGKLLNTL---SGAGVFLP-----SACGGGGTCAQCKCKVLSGGGEML--P 83
Query: 139 TDKEKEKLKRKPKNWRLACQTTV 161
T++ + + + WRL+CQ V
Sbjct: 84 TERSHFTKREEKEGWRLSCQVAV 106
>gi|359395286|ref|ZP_09188338.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
boliviensis LC1]
gi|357969551|gb|EHJ91998.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
boliviensis LC1]
Length = 410
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ T GG+ L + N G + S C GGG+C C V EG +
Sbjct: 43 NGDPEHTLSTQAGGKLLNTLAAN------GIFLS--SACGGGGSCAQCKCRVEEGGGSI- 93
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
T++ ++ K + WRL+CQ V
Sbjct: 94 LPTEESHFTMREKKEGWRLSCQVPV 118
>gi|193212443|ref|YP_001998396.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
gi|193085920|gb|ACF11196.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
Length = 233
Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
C G G C C V V EG + LG TD EK L ++ R+ACQ T+
Sbjct: 33 CGGHGLCQACYVTVQEGADCLGPLTDVEKAFLSPRQIAAGGRMACQATL 81
>gi|448680338|ref|ZP_21690655.1| (2Fe-2S)-binding protein [Haloarcula argentinensis DSM 12282]
gi|445768782|gb|EMA19859.1| (2Fe-2S)-binding protein [Haloarcula argentinensis DSM 12282]
Length = 111
Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 79 TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSR 138
T + H TA G LRD++L+ + +G YA + NC G G C TC V E +
Sbjct: 11 TGETHELTAERGAVLRDVLLDVGLSPHGRYAERV-NCGGRGICATCGVRFAEPPD----- 64
Query: 139 TDKEKEKLKRKPKNWRLACQTTV 161
D + L + RL+CQ V
Sbjct: 65 PDHWHDDLADRFGYPRLSCQLRV 87
>gi|325297931|ref|YP_004257848.1| NADH:ubiquinone oxidoreductase subunit F [Bacteroides salanitronis
DSM 18170]
gi|324317484|gb|ADY35375.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides salanitronis
DSM 18170]
Length = 420
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K ++ +WRL CQ V
Sbjct: 66 SACGGKGSCGQCKCQVLEGGGEILPSEVGHFSRKQQK--DHWRLGCQVKV 113
>gi|399911446|ref|ZP_10779760.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
KM-1]
Length = 410
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ T GG+ L + N G + S C GGG+C C V EG +
Sbjct: 43 NGDPEHTITTQAGGKLLNTLAAN------GIFLS--SACGGGGSCAQCKCRVEEGGGAI- 93
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
T++ ++ K WRL+CQ V
Sbjct: 94 LPTEESHFTMREKKDGWRLSCQVPV 118
>gi|448590803|ref|ZP_21650568.1| ferredoxin-like protein [Haloferax elongans ATCC BAA-1513]
gi|445734299|gb|ELZ85858.1| ferredoxin-like protein [Haloferax elongans ATCC BAA-1513]
Length = 119
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + Y A +NC G G CGTC V V EG +
Sbjct: 2 PTVHFRGREIECNRGAVLRDVLREAGESPYNGSAS-WANCRGVGCCGTCAVSV-EGP--V 57
Query: 136 GSRTDKEKEKLKRKPKNW----RLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
RT E +L P + RL+CQT V G + +++ P + G E
Sbjct: 58 THRTKMEGWRLNFPPHDGKLGVRLSCQTLV-----LGDLWVEKYPGFWGQE 103
>gi|323138489|ref|ZP_08073558.1| ferredoxin [Methylocystis sp. ATCC 49242]
gi|322396285|gb|EFX98817.1| ferredoxin [Methylocystis sp. ATCC 49242]
Length = 101
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR- 148
G +L D +L + + +S C G CG C V V EGK+ L T E EKL
Sbjct: 18 GSRLLDAILAAGEAI-------VSKCGGEAKCGQCHVFVQEGKKSLSKTTRSENEKLDSI 70
Query: 149 --KPKNWRLACQTTVGTPDST 167
RLACQ +G + T
Sbjct: 71 VGVSSKSRLACQALIGAENVT 91
>gi|284165247|ref|YP_003403526.1| ferredoxin [Haloterrigena turkmenica DSM 5511]
gi|284014902|gb|ADB60853.1| ferredoxin [Haloterrigena turkmenica DSM 5511]
Length = 123
Score = 39.3 bits (90), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P I FR C G+ LRD++L + + A L NC G GTCGTC V IEG
Sbjct: 2 PTIEFRGREIECERGRILRDVLLEAGESPHNGRANWL-NCRGHGTCGTCAV-AIEGD--A 57
Query: 136 GSRTDKEKEKLKRKPKN----WRLACQTTV 161
T E+ +L P + RL+CQT V
Sbjct: 58 SEPTAAERRRLSLPPHDPDGGLRLSCQTRV 87
>gi|206603447|gb|EDZ39927.1| Ferredoxin [Leptospirillum sp. Group II '5-way CG']
Length = 109
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEK--EKLKRKPKNWRLACQTTVGTPDST 167
C G CGTC + V EG + L R KE K + RL CQT +G+ D T
Sbjct: 36 CGGNAACGTCTIVVKEGADSLKPRNAKESFLAKAMMLGDDQRLGCQTEMGSGDLT 90
>gi|407473618|ref|YP_006788018.1| iron-sulfur cluster-binding protein [Clostridium acidurici 9a]
gi|407050126|gb|AFS78171.1| iron-sulfur cluster-binding protein [Clostridium acidurici 9a]
Length = 573
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
C G GTCG C +E GK L + DKEKE +K + + RLAC TTV
Sbjct: 36 CNGMGTCGKCKIEA-TGK--LSAVMDKEKEHIK-EGSSERLACLTTV 78
>gi|86142970|ref|ZP_01061392.1| adenylate/guanylate cyclase [Leeuwenhoekiella blandensis MED217]
gi|85830415|gb|EAQ48874.1| adenylate/guanylate cyclase [Leeuwenhoekiella blandensis MED217]
Length = 313
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK---RKPKNWRLACQTTV 161
C G C TC + +++G+E L S + + KL+ PKN RLACQT V
Sbjct: 39 CGGKARCSTCRILIVKGEENL-SEINAAEAKLRTYFELPKNVRLACQTYV 87
>gi|379720900|ref|YP_005313031.1| ferredoxin [Paenibacillus mucilaginosus 3016]
gi|378569572|gb|AFC29882.1| ferredoxin [Paenibacillus mucilaginosus 3016]
Length = 85
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTVGTPDSTGLVVIQQLP 176
GTC C +V+EG E L + TD+E + L + + +RL CQ TV S G V I P
Sbjct: 27 GTCSRCRCQVVEGAEHLSAPTDEELDNLGDEEIEEGFRLGCQATV---RSAGAVTIVHKP 83
>gi|448575525|ref|ZP_21641805.1| ferredoxin-like protein [Haloferax larsenii JCM 13917]
gi|445730466|gb|ELZ82054.1| ferredoxin-like protein [Haloferax larsenii JCM 13917]
Length = 116
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + Y A +NC G G CGTC V V EG +
Sbjct: 2 PTVHFRGREIECDRGAVLRDVLREAGESPYNGNAS-WANCRGVGCCGTCAVSV-EGP--V 57
Query: 136 GSRTDKEKEKLKRKPKNW----RLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
RT E +L P + RL+CQT V G + +++ P + G E
Sbjct: 58 THRTKMEGWRLNFPPHDGQLGVRLSCQTLV-----LGDLWVEKYPGFWGEE 103
>gi|337747040|ref|YP_004641202.1| ferredoxin [Paenibacillus mucilaginosus KNP414]
gi|336298229|gb|AEI41332.1| ferredoxin [Paenibacillus mucilaginosus KNP414]
Length = 97
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTVGTPDSTGLVVIQQLP 176
GTC C +V+EG E L + TD+E + L + + +RL CQ TV S G V I P
Sbjct: 39 GTCSRCRCQVVEGAEHLSAPTDEELDNLGDEEMEEGFRLGCQATV---RSAGAVTIVHKP 95
>gi|423693452|ref|ZP_17667972.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens SS101]
gi|387997717|gb|EIK59046.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens SS101]
Length = 113
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 63 PVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCG 122
P V F H+ PDG A G+ L D+ +++I++ S C G C
Sbjct: 2 PQVTF-LPHAEHCPDGM----VVEAETGKSLLDVAHDNHIEIE-------SACGGVNACT 49
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDST 167
TC + +G + L D E++ L R RL+CQ VGT D T
Sbjct: 50 TCHCIIRKGFDSLNEADDLEEDYLDRAWGLEATSRLSCQAKVGTEDLT 97
>gi|367471013|ref|ZP_09470675.1| Ferredoxin 2Fe-2S [Patulibacter sp. I11]
gi|365813923|gb|EHN09159.1| Ferredoxin 2Fe-2S [Patulibacter sp. I11]
Length = 106
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 114 NCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDSTGL 169
+C G +CGTC V V + G+RTD E + ++ P+ N RLACQ +P GL
Sbjct: 39 DCGGEASCGTCHVIVDDAWITTTGTRTDLESQMVEMSPECGPNSRLACQLRA-SPALDGL 97
Query: 170 VVIQQLPEWK 179
V LPE++
Sbjct: 98 TV--HLPEFQ 105
>gi|282890632|ref|ZP_06299155.1| hypothetical protein pah_c022o244 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175239|ref|YP_004652049.1| ferredoxin-4 [Parachlamydia acanthamoebae UV-7]
gi|281499629|gb|EFB41925.1| hypothetical protein pah_c022o244 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479597|emb|CCB86195.1| ferredoxin-4 [Parachlamydia acanthamoebae UV-7]
Length = 90
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
G CGTC++ V EGKE L T +EK+ L + RLACQ +
Sbjct: 39 GVCGTCVIVVKEGKENLTDPTQEEKDFLGEGTVDERLACQCKI 81
>gi|86608297|ref|YP_477059.1| (Fe-S)-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556839|gb|ABD01796.1| iron-sulfur cluster-binding protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 161
Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 92 KLRDIMLNSNI--DLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR- 148
++ +I NSN+ L L C G G C TC V V EG E L + +E+ L+
Sbjct: 12 QVSEIATNSNLLSVLLQEELNVLKECGGRGLCATCHVYVKEGMESLSPMSKREQRTLEVI 71
Query: 149 ---KPKNWRLACQTTV 161
KP N RLACQ V
Sbjct: 72 TTCKP-NSRLACQARV 86
>gi|453379709|dbj|GAC85562.1| putative 2Fe-2S ferredoxin [Gordonia paraffinivorans NBRC 108238]
Length = 106
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 19/97 (19%)
Query: 90 GQKLRDIMLN---SNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEK 145
GQ L + ++ S ID +C G CGTC V V + GSRT E++
Sbjct: 21 GQNLMQVAIDNGVSGID---------GDCGGDAACGTCHVTVDQQWIAATGSRTPAEEQM 71
Query: 146 LKRKP---KNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
L+ P + RL+CQ +G + GL+V LPE++
Sbjct: 72 LEMNPDCQETSRLSCQIALGA-EHDGLIV--NLPEFQ 105
>gi|317128913|ref|YP_004095195.1| ferredoxin [Bacillus cellulosilyticus DSM 2522]
gi|315473861|gb|ADU30464.1| ferredoxin [Bacillus cellulosilyticus DSM 2522]
Length = 106
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDST 167
L C G C TC VEV++G G T+ EKE +RK +RL+CQ V T D T
Sbjct: 32 LHRCGGKAKCTTCRVEVLQGN--FGPLTNIEKEAFERKGIEDTYRLSCQVYV-TEDVT 86
>gi|427724305|ref|YP_007071582.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427356025|gb|AFY38748.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 170
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
TA + L +I+L +++ L C G C TC + V G+E L D+E+
Sbjct: 14 TANENENLLEILLKEKMNV-------LQACGAQGRCATCHIHVKSGEEALSPMNDQERLT 66
Query: 146 LK---RKPKNWRLACQTTV 161
L N RLACQT +
Sbjct: 67 LSFIATAQANSRLACQTKI 85
>gi|78189139|ref|YP_379477.1| chlorosome envelope protein I [Chlorobium chlorochromatii CaD3]
gi|78171338|gb|ABB28434.1| chlorosome envelope protein I [Chlorobium chlorochromatii CaD3]
Length = 145
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTVGTPDSTGLVVI 172
C G G C TC V V+EG E L ++ E+ L +++ RLACQT + + G + I
Sbjct: 33 CGGRGVCQTCYVTVLEGSEALSPLSEVEQAFLSPRQQQAGGRLACQTRI---ERDGTIRI 89
Query: 173 QQLPE 177
PE
Sbjct: 90 LSRPE 94
>gi|192359425|ref|YP_001982247.1| Na(+)-translocating NADH-quinone reductase subunit F [Cellvibrio
japonicus Ueda107]
gi|190685590|gb|ACE83268.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Cellvibrio japonicus Ueda107]
Length = 407
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + +N+ L S C GGG+C C V EG GS E+
Sbjct: 47 TVPAGGKLLQTLAANNVFL-------ASACGGGGSCAQCKCVVNEGG---GSILPTEEPH 96
Query: 146 LKRKPKN--WRLACQTTV 161
R+ +N WRL+CQ V
Sbjct: 97 FNRREQNQGWRLSCQVPV 114
>gi|428221771|ref|YP_007105941.1| ferredoxin [Synechococcus sp. PCC 7502]
gi|427995111|gb|AFY73806.1| ferredoxin [Synechococcus sp. PCC 7502]
Length = 332
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 92 KLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL---KR 148
+L I+LN+ + + L C G G C TC V V +G E L T++E L K
Sbjct: 187 RLLSILLNNKVSI-------LKACGGQGRCATCHVFVDKGMEYLTPPTEQELMTLSMMKI 239
Query: 149 KPKNWRLACQTTV 161
+ N RLACQ V
Sbjct: 240 EQPNARLACQCKV 252
>gi|448633060|ref|ZP_21674058.1| (2Fe-2S)-binding protein [Haloarcula vallismortis ATCC 29715]
gi|445752417|gb|EMA03841.1| (2Fe-2S)-binding protein [Haloarcula vallismortis ATCC 29715]
Length = 111
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 81 DIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTD 140
+ H TA G LRD++L++ +G YA + NC G G C TC V + E D
Sbjct: 13 ETHELTAEPGAVLRDVLLDAGFSPHGRYAERV-NCGGRGICATCGVRLAEPPA-----PD 66
Query: 141 KEKEKLKRKPKNWRLACQTTV 161
+ L + RL+CQ V
Sbjct: 67 HWHDDLADRFGYPRLSCQLRV 87
>gi|419839242|ref|ZP_14362655.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus haemolyticus
HK386]
gi|386909550|gb|EIJ74219.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus haemolyticus
HK386]
Length = 113
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V + E
Sbjct: 5 IFLPNEEFCPEGMVVDAATGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVIIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNETSDQEEDMLDKAWGLEMDSRLSCQCVVGDED-----LVVEIPKYN 104
>gi|428217117|ref|YP_007101582.1| ferredoxin [Pseudanabaena sp. PCC 7367]
gi|427988899|gb|AFY69154.1| ferredoxin [Pseudanabaena sp. PCC 7367]
Length = 160
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELL---GSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTG 168
L C G G C TC V ++EG E L G R + E + N RLACQ V + G
Sbjct: 34 LKECGGRGMCATCHVYIMEGMESLSPMGRREQRSLEVITTCKPNSRLACQAKV---MAEG 90
Query: 169 LVV 171
+VV
Sbjct: 91 IVV 93
>gi|379731166|ref|YP_005323362.1| Na(+)-translocating NADH-quinone reductase subunit F [Saprospira
grandis str. Lewin]
gi|378576777|gb|AFC25778.1| Na(+)-translocating NADH-quinone reductase subunit F [Saprospira
grandis str. Lewin]
Length = 442
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C GGGTC C +V G G E + RK NWRLACQ V
Sbjct: 69 SACGGGGTCAMCRCQVDNGG---GDILPTELNHISRKDAQDNWRLACQVKV 116
>gi|424841237|ref|ZP_18265862.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Saprospira grandis DSM 2844]
gi|395319435|gb|EJF52356.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Saprospira grandis DSM 2844]
Length = 442
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C GGGTC C +V G G E + RK NWRLACQ V
Sbjct: 69 SACGGGGTCAMCRCQVDNGG---GDILPTELNHISRKDAQDNWRLACQVKV 116
>gi|421888796|ref|ZP_16319875.1| Fe-S clusters assembly (2FE-2S) ferredoxin [Ralstonia solanacearum
K60-1]
gi|378965847|emb|CCF96623.1| Fe-S clusters assembly (2FE-2S) ferredoxin [Ralstonia solanacearum
K60-1]
Length = 112
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 73 VLLP--DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
V+LP + PD A G + D +L ++I++ C C TC V V E
Sbjct: 5 VVLPHVEYCPDGAVIEAKPGTSICDALLGAHIEIE-------HACEKSCACTTCHVIVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + LG T+KE++ L + N RL+CQ V D +I ++P++
Sbjct: 58 GFDSLGEATEKEEDLLDKAWGLEPNSRLSCQAKVADED-----LIVEIPKY 103
>gi|387895489|ref|YP_006325786.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens A506]
gi|388467273|ref|ZP_10141483.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas synxantha BG33R]
gi|387159984|gb|AFJ55183.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens A506]
gi|388010853|gb|EIK72040.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas synxantha BG33R]
Length = 113
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 63 PVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCG 122
P V F H+ PDG A G+ L D+ +++I++ S C G C
Sbjct: 2 PQVTF-LPHAEHCPDGM----VVEAETGKSLLDVAHDNHIEIE-------SACGGVNACT 49
Query: 123 TCMVEVIEGKELLGSRTDKEKEKLKR----KPKNWRLACQTTVGTPDST 167
TC + +G + L D E++ L R +P + RL+CQ VGT D T
Sbjct: 50 TCHCIIRKGFDSLNEADDLEEDYLDRAWGLEPTS-RLSCQAKVGTEDLT 97
>gi|416076203|ref|ZP_11585331.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444344826|ref|ZP_21153011.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348005346|gb|EGY45833.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443543327|gb|ELT53582.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 113
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 19/109 (17%)
Query: 74 LLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE 133
P+GT A G L ++ N+ ++++ C G C TC V V EG +
Sbjct: 12 FCPEGT----VVDAAAGDNLLEVAHNAGVEIH-------HACDGSCACTTCHVVVREGGD 60
Query: 134 LLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
L D+E++ L + + RL+CQ +G D LVV ++P++
Sbjct: 61 SLNEPCDQEEDMLDKAWGLEIDSRLSCQCIIGDED---LVV--EIPKYN 104
>gi|303235751|ref|ZP_07322358.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella disiens
FB035-09AN]
gi|302484198|gb|EFL47186.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella disiens
FB035-09AN]
Length = 422
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G +CG C +V EG G D E+ RK +NWRL CQ V
Sbjct: 67 SACGGKASCGQCKCKVEEGG---GEILDSERPHFSRKEIKENWRLGCQAKV 114
>gi|123485060|ref|XP_001324407.1| Ferredoxin 1 [Trichomonas vaginalis G3]
gi|121907289|gb|EAY12184.1| Ferredoxin 1 [Trichomonas vaginalis G3]
gi|187610382|gb|ACD13455.1| putative ferredoxin precursor [Trichomonas vaginalis]
Length = 101
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
C G CG C+ + + GK + + D EKE L+ +P N RLAC T+
Sbjct: 46 CQGNKACGKCICKHVSGK--VAAAEDDEKEFLEDQPANARLACAITL 90
>gi|449071527|ref|YP_007438607.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
psittaci Mat116]
gi|449040035|gb|AGE75459.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
psittaci Mat116]
Length = 426
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|448442265|ref|ZP_21589489.1| ferredoxin [Halorubrum saccharovorum DSM 1137]
gi|445687883|gb|ELZ40157.1| ferredoxin [Halorubrum saccharovorum DSM 1137]
Length = 104
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++ + + +Y + L NC G G+CG+C V+V +G+ + KE +L
Sbjct: 16 GAVLRDVLEEAGLSVYNGKMKQL-NCRGAGSCGSCAVQV-DGE--VSEPGKKETARLWLP 71
Query: 150 P----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 72 PHHPSHDVRLACQTRV 87
>gi|389874957|ref|YP_006374313.1| adenylate cyclase protein [Tistrella mobilis KA081020-065]
gi|388532137|gb|AFK57331.1| adenylate cyclase protein [Tistrella mobilis KA081020-065]
Length = 573
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQTTVGTPDSTGL 169
++ C G G C TC VE++ G E L +E L R P RLAC+ TG
Sbjct: 293 VAVCGGRGRCSTCRVEIVRGLENLPPADAEESALLSRIRAPAGVRLACRL-----HPTGP 347
Query: 170 VVIQQLPEWKGH 181
V + L + +GH
Sbjct: 348 VTVHPLLKAQGH 359
>gi|330502566|ref|YP_004379435.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina NK-01]
gi|328916852|gb|AEB57683.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina NK-01]
Length = 407
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKL 146
G KL + N NI L S C GGGTC C ++E G E+L + +E
Sbjct: 50 AGGKLLQTLANHNIFLS-------SACGGGGTCAQCKC-IVESGGGEMLST---EESHFT 98
Query: 147 KRKPKN-WRLACQTTV 161
KR+ + WRL+CQT V
Sbjct: 99 KREAREGWRLSCQTPV 114
>gi|443477089|ref|ZP_21066960.1| ferredoxin [Pseudanabaena biceps PCC 7429]
gi|443017860|gb|ELS32216.1| ferredoxin [Pseudanabaena biceps PCC 7429]
Length = 146
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK---RKPKNWRLACQTTV 161
+ C G G CGTC + V +G L + E+ LK R +RL CQT+V
Sbjct: 34 ATCQGQGICGTCALRVFDGASSLSPMENLEQATLKNVRRDIALYRLTCQTSV 85
>gi|90417528|ref|ZP_01225450.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium HTCC2207]
gi|90330681|gb|EAS45965.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2207]
Length = 407
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + SN L+ P S C GGG+C C + +G GS E+
Sbjct: 47 TVAAGDKLLQTL--SNAGLFLP-----SACGGGGSCAQCKCVIADGG---GSMLPTEESH 96
Query: 146 LKRK--PKNWRLACQTTV 161
R+ + WRL+CQ V
Sbjct: 97 FNRREAAEGWRLSCQVPV 114
>gi|427724303|ref|YP_007071580.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427356023|gb|AFY38746.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 178
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKE---KLKRKPKNWRLACQTTV 161
C G G CGTC V + G + L T +E L + P+++RL+CQ V
Sbjct: 68 CGGKGYCGTCSVRINSGSQQLSPVTTQEISTLNNLNQSPEDYRLSCQVKV 117
>gi|423316806|ref|ZP_17294711.1| hypothetical protein HMPREF9699_01282 [Bergeyella zoohelcum ATCC
43767]
gi|405582558|gb|EKB56553.1| hypothetical protein HMPREF9699_01282 [Bergeyella zoohelcum ATCC
43767]
Length = 110
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVV 171
C G C +C V V+EG E L S D+E L N RL CQ + T + GL V
Sbjct: 46 CGGMAMCASCQVYVLEGAEKLHSMEDEEDAMLAEAYHVKDNSRLGCQIHI-TEELEGLAV 104
>gi|359784787|ref|ZP_09287953.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
GFAJ-1]
gi|359297932|gb|EHK62154.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
GFAJ-1]
Length = 410
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 77 DGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG 136
+G P+ T GG+ L + N G + S C GGG+C C V EG +
Sbjct: 43 NGDPEHTLTTQAGGKLLNTLAAN------GIFLS--SACGGGGSCAQCKCRVEEGGGSI- 93
Query: 137 SRTDKEKEKLKRKPKNWRLACQTTV 161
T++ ++ K WRL+CQ V
Sbjct: 94 LPTEESHFTMREKKDGWRLSCQVPV 118
>gi|23200313|pdb|1L5P|A Chain A, Crystal Structure Of Trichomonas Vaginalis Ferredoxin
gi|23200314|pdb|1L5P|B Chain B, Crystal Structure Of Trichomonas Vaginalis Ferredoxin
gi|23200315|pdb|1L5P|C Chain C, Crystal Structure Of Trichomonas Vaginalis Ferredoxin
Length = 93
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
C G CG C+ + + GK + + D EKE L+ +P N RLAC T+
Sbjct: 38 CQGNKACGKCICKHVSGK--VAAAEDDEKEFLEDQPANARLACAITL 82
>gi|393787946|ref|ZP_10376077.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides nordii CL02T12C05]
gi|392656159|gb|EIY49798.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides nordii CL02T12C05]
Length = 423
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L + T K++ +WRL CQ V
Sbjct: 67 SACGGKGSCGQCRCQVLEGGGEILPTETGFFSR--KQQADHWRLGCQVKV 114
>gi|357404800|ref|YP_004916724.1| 2Fe-2S ferredoxin-like [Methylomicrobium alcaliphilum 20Z]
gi|351717465|emb|CCE23130.1| putative 2Fe-2S ferredoxin-like [Methylomicrobium alcaliphilum 20Z]
Length = 545
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 110 RPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQ 158
R + C G GTCG C+++VI G+ T E++KL + + +RLACQ
Sbjct: 45 RVRAACGGLGTCGACLIQVISGR--FNPPTPAERQKLLPDQLVQGYRLACQ 93
>gi|240949686|ref|ZP_04754021.1| 2Fe-2S ferredoxin [Actinobacillus minor NM305]
gi|257464491|ref|ZP_05628862.1| 2Fe-2S ferredoxin [Actinobacillus minor 202]
gi|240295944|gb|EER46620.1| 2Fe-2S ferredoxin [Actinobacillus minor NM305]
gi|257450151|gb|EEV24194.1| 2Fe-2S ferredoxin [Actinobacillus minor 202]
Length = 113
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ L ++ N+ ++++ C G C TC V + EG + L +D+E++ L +
Sbjct: 24 GENLLEVAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNESSDQEEDMLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
RL+CQ +G D ++ ++P++
Sbjct: 77 WGLEMESRLSCQCVIGDED-----LVVEIPKY 103
>gi|14164626|gb|AAK55144.1| ferredoxin [Tritrichomonas foetus]
Length = 94
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 111 PLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
P C G CG C+V+V+ G + + D+EKE L P RLAC ++
Sbjct: 36 PEGTCNGNVACGKCLVKVVSGN--VAAAEDEEKELLDGAPAGARLACAISL 84
>gi|393783876|ref|ZP_10372045.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides salyersiae CL02T12C01]
gi|392667535|gb|EIY61042.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides salyersiae CL02T12C01]
Length = 423
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L + T K++ +WRL CQ V
Sbjct: 67 SACGGKGSCGQCRCQVLEGGGEILPTETGFFSR--KQQADHWRLGCQVKV 114
>gi|386723506|ref|YP_006189832.1| ferredoxin [Paenibacillus mucilaginosus K02]
gi|384090631|gb|AFH62067.1| ferredoxin [Paenibacillus mucilaginosus K02]
Length = 97
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTVGTPDSTGLVVIQQLP 176
GTC C +V+EG E L + TD+E + L + + +RL CQ TV S G V I P
Sbjct: 39 GTCSRCRCQVVEGAEHLSAPTDEELDNLGDEEIEEGFRLGCQATV---RSAGAVTIVHKP 95
>gi|315633889|ref|ZP_07889178.1| ferredoxin [Aggregatibacter segnis ATCC 33393]
gi|315477139|gb|EFU67882.1| ferredoxin [Aggregatibacter segnis ATCC 33393]
Length = 113
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V V E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIH-------HACDGSCACTTCHVVVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L +D+E++ L + RL+CQ +G D ++ ++P++
Sbjct: 58 GGDSLNEPSDQEEDMLDKAWGLEMESRLSCQCIIGDED-----LVVEIPKYN 104
>gi|46446005|ref|YP_007370.1| ferredoxin [2Fe-2S] IV [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399646|emb|CAF23095.1| putative ferredoxin [2Fe-2S] IV [Candidatus Protochlamydia
amoebophila UWE25]
Length = 91
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
G C C ++V++G E L +T +E L KR N+RLACQ +
Sbjct: 40 GLCAVCAIKVVKGMENLSKKTQEETATLTTKRLDANYRLACQCAI 84
>gi|407461072|ref|YP_006738847.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci WC]
gi|405787458|gb|AFS26202.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci WC]
Length = 431
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|424825498|ref|ZP_18250485.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
abortus LLG]
gi|333410597|gb|EGK69584.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
abortus LLG]
Length = 431
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDTLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L+ WRL+CQT V
Sbjct: 91 KDADPPLETDRATFSKQQLEH---GWRLSCQTKV 121
>gi|332529192|ref|ZP_08405156.1| adenylate cyclase protein [Hylemonella gracilis ATCC 19624]
gi|332041415|gb|EGI77777.1| adenylate cyclase protein [Hylemonella gracilis ATCC 19624]
Length = 675
Score = 38.5 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 107 PYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ 158
P+A S C G G C TC V V G E+L + E++ L+R P RLACQ
Sbjct: 394 PHA---SVCGGRGRCSTCRVHVDAGWEMLPPPLEGEQKVLQRIHAPTRVRLACQ 444
>gi|226362728|ref|YP_002780506.1| 2Fe-2S ferredoxin [Rhodococcus opacus B4]
gi|226241213|dbj|BAH51561.1| 2Fe-2S ferredoxin [Rhodococcus opacus B4]
Length = 107
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 18/110 (16%)
Query: 67 FAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMV 126
F+H+ DGT D+ T G ++ ML G A ++ C G C TC V
Sbjct: 4 VTFLHN----DGTEDV-VDTDPGTSLMQAAML-------GGVAGIVAECGGSMMCATCHV 51
Query: 127 EVIEG-KELLGSRTDKEKEKLKRKPK----NWRLACQTTVGTPDSTGLVV 171
V E E +G R++ E++ L+ + N RL+CQ +V + D GL+V
Sbjct: 52 YVSEDWMEKVGGRSEMEEDMLESTAEPCRPNSRLSCQISV-SEDLDGLIV 100
>gi|162455586|ref|YP_001617953.1| ferredoxin [Sorangium cellulosum So ce56]
gi|161166168|emb|CAN97473.1| putative ferredoxin [Sorangium cellulosum So ce56]
Length = 103
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 121 CGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQTTV 161
C TC VEV+EG++LL E++ L+R P RLACQ +
Sbjct: 44 CATCRVEVVEGEQLLEPPARGERDLLERLGAPPRLRLACQAVL 86
>gi|384451955|ref|YP_005664553.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 01DC11]
gi|334693665|gb|AEG86883.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 01DC11]
Length = 419
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|119356704|ref|YP_911348.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
gi|119354053|gb|ABL64924.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
Length = 222
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQTTV 161
C G G C +C V V EG E L ++EK + K N RLAC+TT+
Sbjct: 33 CGGNGICQSCFVYVKEGSEYLSDPGEEEKTFISAKLLNEGGRLACRTTI 81
>gi|409393035|ref|ZP_11244545.1| putative 2Fe-2S ferredoxin [Gordonia rubripertincta NBRC 101908]
gi|403197216|dbj|GAB87779.1| putative 2Fe-2S ferredoxin [Gordonia rubripertincta NBRC 101908]
Length = 106
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 114 NCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKRKP---KNWRLACQTTVGTPDSTGL 169
+C G CGTC V + + GSR E + L+ P +N RL+CQ + T + GL
Sbjct: 39 DCGGDAACGTCHVMIDQQWAASTGSRNATEAQMLEMNPDCQENSRLSCQIAL-TAEHDGL 97
Query: 170 VVIQQLPEWK 179
VV LPE++
Sbjct: 98 VV--NLPEFQ 105
>gi|407457136|ref|YP_006735709.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci VS225]
gi|405784397|gb|AFS23144.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci VS225]
Length = 431
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|386829192|ref|ZP_10116299.1| ferredoxin [Beggiatoa alba B18LD]
gi|386430076|gb|EIJ43904.1| ferredoxin [Beggiatoa alba B18LD]
Length = 93
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
G CGTC++ VI+G E L + + E + LK KN+RLACQ +
Sbjct: 40 GDCGTCLMHVIKGMENLSAPSMLEDKVLKENMAGKNFRLACQAQI 84
>gi|329943221|ref|ZP_08291995.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydophila psittaci Cal10]
gi|332287801|ref|YP_004422702.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 6BC]
gi|384450965|ref|YP_005663565.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydophila psittaci 6BC]
gi|384452929|ref|YP_005665526.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 08DC60]
gi|384453908|ref|YP_005666504.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci C19/98]
gi|384454887|ref|YP_005667482.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 02DC15]
gi|392377030|ref|YP_004064808.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
psittaci RD1]
gi|407454451|ref|YP_006733559.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci 84/55]
gi|313848373|emb|CBY17377.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
psittaci RD1]
gi|325507027|gb|ADZ18665.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 6BC]
gi|328814768|gb|EGF84758.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydophila psittaci Cal10]
gi|328915059|gb|AEB55892.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydophila psittaci 6BC]
gi|334692689|gb|AEG85908.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci C19/98]
gi|334694644|gb|AEG87861.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 02DC15]
gi|334695618|gb|AEG88834.1| Na(+)-translocating NADH:ubiquinone oxidoreductase subunit F
[Chlamydophila psittaci 08DC60]
gi|405781210|gb|AFS19960.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci 84/55]
Length = 431
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|62185454|ref|YP_220239.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
abortus S26/3]
gi|62148521|emb|CAH64292.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
abortus S26/3]
Length = 431
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDTLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L+ WRL+CQT V
Sbjct: 91 KDADPPLETDRATFSKQQLEH---GWRLSCQTKV 121
>gi|406593830|ref|YP_006741009.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci NJ1]
gi|405789702|gb|AFS28444.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci NJ1]
Length = 431
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|319902432|ref|YP_004162160.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides helcogenes P
36-108]
gi|319417463|gb|ADV44574.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides helcogenes P
36-108]
Length = 422
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K ++ +WRL CQ V
Sbjct: 66 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSRKQQK--DHWRLGCQVKV 113
>gi|407459699|ref|YP_006737802.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci M56]
gi|405786580|gb|AFS25325.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci M56]
Length = 431
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|433590222|ref|YP_007279718.1| ferredoxin [Natrinema pellirubrum DSM 15624]
gi|448332372|ref|ZP_21521616.1| ferredoxin I 5 [Natrinema pellirubrum DSM 15624]
gi|433305002|gb|AGB30814.1| ferredoxin [Natrinema pellirubrum DSM 15624]
gi|445627476|gb|ELY80800.1| ferredoxin I 5 [Natrinema pellirubrum DSM 15624]
Length = 114
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE 133
G LRD +L +YG +R ++NC G G C TC VEV E
Sbjct: 23 GTILRDALLEHGFPVYGTVSR-VANCGGRGLCSTCTVEVDPAPE 65
>gi|416892751|ref|ZP_11924075.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter aphrophilus
ATCC 33389]
gi|347814449|gb|EGY31098.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter aphrophilus
ATCC 33389]
Length = 113
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V V E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIH-------HACDGSCACTTCHVVVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L D+E++ L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GGDSLNEPCDQEEDMLDKAWGLEIDSRLSCQCIVGDED-----LVVEIPKYN 104
>gi|166154280|ref|YP_001654398.1| ferredoxin [Chlamydia trachomatis 434/Bu]
gi|166155155|ref|YP_001653410.1| ferredoxin [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335531|ref|ZP_07223775.1| ferredoxin [Chlamydia trachomatis L2tet1]
gi|339625710|ref|YP_004717189.1| ferredoxin-4 [Chlamydia trachomatis L2c]
gi|165930268|emb|CAP03754.1| ferredoxin [Chlamydia trachomatis 434/Bu]
gi|165931143|emb|CAP06708.1| ferredoxin [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|339460678|gb|AEJ77181.1| ferredoxin-4 [Chlamydia trachomatis L2c]
gi|407651594|gb|AFU24094.1| ferredoxin [Chlamydia trachomatis]
gi|407651597|gb|AFU24096.1| ferredoxin [Chlamydia trachomatis]
gi|408777321|gb|AFU90691.1| ferredoxin [Chlamydia trachomatis]
gi|440525866|emb|CCP51350.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/8200/07]
gi|440535690|emb|CCP61203.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/795]
gi|440536580|emb|CCP62094.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/440/LN]
gi|440537472|emb|CCP62986.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/1322/p2]
gi|440538362|emb|CCP63876.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/115]
gi|440539251|emb|CCP64765.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/224]
gi|440540141|emb|CCP65655.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2/25667R]
gi|440541031|emb|CCP66545.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L3/404/LN]
gi|440541919|emb|CCP67433.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/UCH-2]
gi|440542809|emb|CCP68323.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Canada2]
gi|440543701|emb|CCP69215.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/LST]
gi|440544591|emb|CCP70105.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams1]
gi|440545481|emb|CCP70995.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/CV204]
gi|440913743|emb|CCP90160.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams2]
gi|440914633|emb|CCP91050.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams3]
gi|440915523|emb|CCP91940.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Canada1]
gi|440916418|emb|CCP92835.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams4]
gi|440917308|emb|CCP93725.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams5]
Length = 91
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC++EV+EG + L ++ E + L + N RLACQ +
Sbjct: 39 GVCGTCVIEVLEGADNLSDFSEAEYDFLGDPEDSNERLACQCCI 82
>gi|406592774|ref|YP_006739954.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci CP3]
gi|406594782|ref|YP_006742046.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci MN]
gi|410858813|ref|YP_006974753.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
psittaci 01DC12]
gi|405783214|gb|AFS21962.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci MN]
gi|405788646|gb|AFS27389.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci CP3]
gi|410811708|emb|CCO02363.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
psittaci 01DC12]
Length = 431
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|329897473|ref|ZP_08272116.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium IMCC3088]
gi|328921170|gb|EGG28573.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium IMCC3088]
Length = 406
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G KL + +SN+ L S C GGGTC C V G G+ E+ R+
Sbjct: 50 GGKLLQTLADSNLFL-------ASACGGGGTCAQCKCIVKSGG---GAMLPTEEGHFNRR 99
Query: 150 --PKNWRLACQTTV 161
+ WRL+CQT V
Sbjct: 100 EAAEGWRLSCQTAV 113
>gi|225175253|ref|ZP_03729249.1| ferredoxin [Dethiobacter alkaliphilus AHT 1]
gi|225169429|gb|EEG78227.1| ferredoxin [Dethiobacter alkaliphilus AHT 1]
Length = 634
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
SNC G GTCG C+V+V +G L S + K K LACQT V
Sbjct: 36 SNCGGDGTCGRCLVKVKDGNVRLKSTGAVSQ---KAKQAGMVLACQTMV 81
>gi|86136499|ref|ZP_01055078.1| adenylate/guanylate cyclase [Roseobacter sp. MED193]
gi|85827373|gb|EAQ47569.1| adenylate/guanylate cyclase [Roseobacter sp. MED193]
Length = 563
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQT 159
S C G G C TC +EV +G E L + E LK + +N RLACQ
Sbjct: 277 SLCGGKGRCTTCRIEVTKGLENLAPPSSAEARTLKAIKARENVRLACQV 325
>gi|448386119|ref|ZP_21564327.1| ferredoxin I 5 [Haloterrigena thermotolerans DSM 11522]
gi|445656017|gb|ELZ08859.1| ferredoxin I 5 [Haloterrigena thermotolerans DSM 11522]
Length = 114
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV 128
G LRD +L +YG +R ++NC G G C TC VEV
Sbjct: 23 GTILRDALLEHGFPVYGTVSR-VANCGGRGLCSTCTVEV 60
>gi|317478883|ref|ZP_07938033.1| ubiquinone oxidoreductase [Bacteroides sp. 4_1_36]
gi|423306354|ref|ZP_17284353.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides uniformis CL03T00C23]
gi|423309096|ref|ZP_17287086.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides uniformis CL03T12C37]
gi|316904965|gb|EFV26769.1| ubiquinone oxidoreductase [Bacteroides sp. 4_1_36]
gi|392679089|gb|EIY72482.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides uniformis CL03T00C23]
gi|392685835|gb|EIY79146.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides uniformis CL03T12C37]
Length = 422
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S T K+ +WRL CQ V
Sbjct: 66 SACGGKGSCGQCKCQVMEGGGEILPSETPHFSR--KQIQDHWRLGCQVKV 113
>gi|170079268|ref|YP_001735906.1| ferredoxin [Synechococcus sp. PCC 7002]
gi|169886937|gb|ACB00651.1| probable ferredoxin [Synechococcus sp. PCC 7002]
Length = 184
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK- 147
G + L D++L ++ + + C G C TC + V G E L D+E+ L
Sbjct: 31 GQETLLDVLLREDMSV-------MQACGAQGRCATCHIYVKSGGEALSPMNDQERLTLSF 83
Query: 148 --RKPKNWRLACQTTV 161
N RLACQT +
Sbjct: 84 IATAQANSRLACQTKI 99
>gi|29840642|ref|NP_829748.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
caviae GPIC]
gi|33301357|sp|Q821Q3.1|NQRF_CHLCV RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|29834992|gb|AAP05626.1| NADH:ubiquinone oxidoreductase, subunit F [Chlamydophila caviae
GPIC]
Length = 431
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 85 RTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE--LLGSRTDKE 142
+T G+ L +L+S I + P C G TC C V++++ + L R
Sbjct: 53 KTVDSGRTLLSSLLDSGIPIPSP-------CGGKATCKQCKVKIVKNADQPLETDRATFS 105
Query: 143 KEKLKRKPKNWRLACQTTV 161
K++L++ WRL+CQT V
Sbjct: 106 KQQLEQ---GWRLSCQTKV 121
>gi|329965417|ref|ZP_08302341.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides fluxus YIT
12057]
gi|328522209|gb|EGF49323.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides fluxus YIT
12057]
Length = 438
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S T K+ +WRL CQ V
Sbjct: 82 SACGGKGSCGQCKCQVMEGGGEILPSETPHFSR--KQIQDHWRLGCQVKV 129
>gi|387771056|ref|ZP_10127228.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella bettyae CCUG 2042]
gi|386902975|gb|EIJ67796.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella bettyae CCUG 2042]
Length = 113
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H + P+G A G L ++ L + I++ C G C TC + E
Sbjct: 9 HETICPEGM----VVDAAAGDNLLEVALEAGIEIEHA-------CDGSCACTTCHCIIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L TD+E + L + + RL+CQ +G D LVV ++P++
Sbjct: 58 GGDSLNESTDQEDDMLDKAWGLEVDSRLSCQCKIGNED---LVV--EIPKY 103
>gi|363582938|ref|ZP_09315748.1| Na(+)-translocating NADH-quinone reductase subunit F
[Flavobacteriaceae bacterium HQM9]
Length = 435
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C GGGTC C +V+EG G E+ RK + WRL CQ V
Sbjct: 73 SACGGGGTCIQCKCQVLEGG---GDLLPTEEPHFTRKEAAEGWRLGCQVKV 120
>gi|160889878|ref|ZP_02070881.1| hypothetical protein BACUNI_02309 [Bacteroides uniformis ATCC 8492]
gi|270294129|ref|ZP_06200331.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D20]
gi|156860870|gb|EDO54301.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides uniformis
ATCC 8492]
gi|270275596|gb|EFA21456.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D20]
Length = 438
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S T K+ +WRL CQ V
Sbjct: 82 SACGGKGSCGQCKCQVMEGGGEILPSETPHFSR--KQIQDHWRLGCQVKV 129
>gi|89890494|ref|ZP_01202004.1| phenylacetic acid degradation oxidoreductase / ferredoxin-NADPH
reductase [Flavobacteria bacterium BBFL7]
gi|89517409|gb|EAS20066.1| phenylacetic acid degradation oxidoreductase / ferredoxin-NADPH
reductase [Flavobacteria bacterium BBFL7]
Length = 358
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 24/124 (19%)
Query: 51 ENDSQANAAEEPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYAR 110
E+ ++A AA E V V + DG+ + HF + D + + DL PYA
Sbjct: 252 EDKARAAAALEQKVDGV----DVTIIDGSKEFHFVLGDDFDNVLDGAIGAGADL--PYA- 304
Query: 111 PLSNCAGGGTCGTCMVEVIEGKELLG---SRTDKEKEKLKRKPKNWRLACQTTVGTPDST 167
GG C TC +V+EG + + TD+E E K + L+C V P S
Sbjct: 305 -----CKGGVCSTCKCKVVEGSVAMKVNYALTDEEVE------KGFVLSC---VSVPTSK 350
Query: 168 GLVV 171
LVV
Sbjct: 351 KLVV 354
>gi|114705899|ref|ZP_01438802.1| ferredoxin [Fulvimarina pelagi HTCC2506]
gi|114538745|gb|EAU41866.1| ferredoxin [Fulvimarina pelagi HTCC2506]
Length = 106
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 81 DIHFRTACG--GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-KELLGS 137
D H RT G G L ++ + + ID G A +C G +C TCMV V E + L
Sbjct: 10 DGHARTLHGEAGLSLMEVAVRNGID--GIEA----SCGGACSCATCMVYVDESWRARLVP 63
Query: 138 RTDKEKEKLK---RKPKNWRLACQTTVGTPDSTGLVV 171
R++ E++ L+ + RLACQ +G P+ GLVV
Sbjct: 64 RSEFEEDMLELAFEADETSRLACQIRLG-PEHDGLVV 99
>gi|333908465|ref|YP_004482051.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinomonas
posidonica IVIA-Po-181]
gi|333478471|gb|AEF55132.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinomonas
posidonica IVIA-Po-181]
Length = 408
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
TA G KL + NS I L S C GGGTC C +V G GS E+
Sbjct: 48 TAPAGGKLLQTLANSGIFLS-------SACGGGGTCAQCKCKVTSGG---GSMLSTEQSH 97
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + RL+CQ +V
Sbjct: 98 FTRREEKEGLRLSCQVSV 115
>gi|424776766|ref|ZP_18203742.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 1
[Alcaligenes sp. HPC1271]
gi|422888059|gb|EKU30451.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 1
[Alcaligenes sp. HPC1271]
Length = 102
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-KRK 149
Q+ ++++ + I + P+ C G G C C V+EG E L + KEK++L +R
Sbjct: 18 QENTNLVVRAGIKQF-PFPHLTYGC-GMGKCAKCACRVLEGGEHLPAANWKEKKQLGERL 75
Query: 150 PKNWRLACQTTV 161
+ WRLACQ +
Sbjct: 76 DQGWRLACQLWI 87
>gi|53713305|ref|YP_099297.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
fragilis YCH46]
gi|265763380|ref|ZP_06091948.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_16]
gi|336409624|ref|ZP_08590106.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_56FAA]
gi|375358429|ref|YP_005111201.1| putative Na+-translocating NADH-quinone reductase subunit F
[Bacteroides fragilis 638R]
gi|383118290|ref|ZP_09939032.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_2_5]
gi|423249933|ref|ZP_17230949.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T00C08]
gi|423255433|ref|ZP_17236362.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T12C07]
gi|423257680|ref|ZP_17238603.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T00C01]
gi|423265353|ref|ZP_17244356.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T12C05]
gi|52216170|dbj|BAD48763.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides
fragilis YCH46]
gi|251945562|gb|EES85969.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_2_5]
gi|263255988|gb|EEZ27334.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_16]
gi|301163110|emb|CBW22659.1| putative Na+-translocating NADH-quinone reductase subunit F
[Bacteroides fragilis 638R]
gi|335946005|gb|EGN07811.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_56FAA]
gi|387778048|gb|EIK40144.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T00C01]
gi|392651078|gb|EIY44743.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T12C07]
gi|392653995|gb|EIY47644.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T00C08]
gi|392703011|gb|EIY96155.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T12C05]
Length = 423
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L + T K + +WRL CQ V
Sbjct: 67 SACGGKGSCGQCRCQVLEGGGEILPTETGFFSR--KEQADHWRLGCQVKV 114
>gi|333921938|ref|YP_004495519.1| ferredoxin [Amycolicicoccus subflavus DQS3-9A1]
gi|333484159|gb|AEF42719.1| Ferredoxin [Amycolicicoccus subflavus DQS3-9A1]
Length = 106
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI-EGKELLGSRTDKEKEKLKR 148
GQ L I +N+ + ++C G CGTC V V + E +G E+E L
Sbjct: 21 GQSLMRIAVNNAVPGID------ADCGGEAACGTCHVIVDPQWSEQVGRSGASEEEMLAM 74
Query: 149 KPKNW---RLACQTTVGTPDSTGLVVIQQLPEWK 179
P+ RL+CQ T + D GLVV Q+PE++
Sbjct: 75 NPERLPTSRLSCQMT-ASADWDGLVV--QVPEFQ 105
>gi|451981953|ref|ZP_21930289.1| putative Ferredoxin, root r-b2 ( ferredoxin) [Nitrospina gracilis
3/211]
gi|451760794|emb|CCQ91565.1| putative Ferredoxin, root r-b2 ( ferredoxin) [Nitrospina gracilis
3/211]
Length = 98
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 100 SNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLAC 157
S ID+ LS GTCG C + V+EG+E L T++EK+ L + RL C
Sbjct: 20 SLIDICEEVEVSLSFGCTEGTCGVCELTVVEGRENLSKITEEEKDYLYEEDLEGGMRLGC 79
Query: 158 QTTVGTPDSTGLVVIQQLPEWKGHEWK 184
Q V D T WKG+ K
Sbjct: 80 QVKVRKGDVT--------LTWKGNRAK 98
>gi|423268002|ref|ZP_17246974.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T00C42]
gi|423274544|ref|ZP_17253491.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T12C13]
gi|423285856|ref|ZP_17264737.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 615]
gi|392704970|gb|EIY98102.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T00C42]
gi|392705570|gb|EIY98700.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T12C13]
gi|404578540|gb|EKA83261.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 615]
Length = 423
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L + T K + +WRL CQ V
Sbjct: 67 SACGGKGSCGQCRCQVLEGGGEILPTETGFFSR--KEQADHWRLGCQVKV 114
>gi|94967510|ref|YP_589558.1| ferredoxin [Candidatus Koribacter versatilis Ellin345]
gi|94549560|gb|ABF39484.1| ferredoxin [Candidatus Koribacter versatilis Ellin345]
Length = 137
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP 150
+ + D+ LN I L C G C TC V V +G ELL D E ++L
Sbjct: 49 ESILDVALNFGIHLDHA-------CGGNCACTTCHVVVKKGAELLSELDDDEADRLDGAA 101
Query: 151 K---NWRLACQTTVGTPDSTGLVVIQQLPEW 178
RL CQ + P G +V+ ++P W
Sbjct: 102 DLQLASRLGCQVQIEKP---GEIVV-EIPAW 128
>gi|429732244|ref|ZP_19266861.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans Y4]
gi|429156690|gb|EKX99313.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans Y4]
Length = 118
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V V E
Sbjct: 10 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVVRE 62
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L D+E++ L + + RL+CQ +G D ++ ++P++
Sbjct: 63 GGDSLNEPCDQEEDMLDKAWGLEIDSRLSCQCIIGDED-----LVVEIPKYN 109
>gi|378826933|ref|YP_005189665.1| putative adenylate/guanylate cyclase [Sinorhizobium fredii HH103]
gi|365179985|emb|CCE96840.1| putative adenylate/guanylate cyclase [Sinorhizobium fredii HH103]
Length = 558
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ-------TTVG 162
+S C G G C TC V VIEG + + E L R P N RLACQ T V
Sbjct: 281 VSVCGGRGRCSTCRVRVIEGLDGQPAPEAAELTTLSRIGAPANVRLACQFRPTHNVTVVP 340
Query: 163 TPDSTGLVVIQQLPEWKG 180
D+ L + QL G
Sbjct: 341 ILDTDSLGIKTQLARQNG 358
>gi|313146675|ref|ZP_07808868.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423276992|ref|ZP_17255906.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 610]
gi|424663265|ref|ZP_18100302.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 616]
gi|313135442|gb|EFR52802.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404576955|gb|EKA81693.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 616]
gi|404587468|gb|EKA92007.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 610]
Length = 423
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L + T K + +WRL CQ V
Sbjct: 67 SACGGKGSCGQCRCQVLEGGGEILPTETGFFSR--KEQADHWRLGCQVKV 114
>gi|153806720|ref|ZP_01959388.1| hypothetical protein BACCAC_00991 [Bacteroides caccae ATCC 43185]
gi|423218153|ref|ZP_17204649.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides caccae CL03T12C61]
gi|149131397|gb|EDM22603.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides caccae ATCC
43185]
gi|392627656|gb|EIY21691.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides caccae CL03T12C61]
Length = 424
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 115
>gi|448528909|ref|ZP_21620289.1| ferredoxin [Halorubrum hochstenium ATCC 700873]
gi|445710357|gb|ELZ62176.1| ferredoxin [Halorubrum hochstenium ATCC 700873]
Length = 130
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR +L++ + Y R L NC G G C TC V V EG D ++L +
Sbjct: 39 GRNLRRTLLDAGLSPYARATRRL-NCGGRGLCATCGVRVREGPP-----ADHWHDRLADR 92
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+C+ V P + LV
Sbjct: 93 FGYPRLSCRIAVDRPMTVALV 113
>gi|15834949|ref|NP_296708.1| ferredoxin [Chlamydia muridarum Nigg]
gi|270285121|ref|ZP_06194515.1| ferredoxin [Chlamydia muridarum Nigg]
gi|270289142|ref|ZP_06195444.1| ferredoxin [Chlamydia muridarum Weiss]
gi|301336516|ref|ZP_07224718.1| ferredoxin [Chlamydia muridarum MopnTet14]
gi|7190371|gb|AAF39193.1| ferredoxin [Chlamydia muridarum Nigg]
Length = 91
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC+VE++EG + L ++ E++ L N RLACQ +
Sbjct: 39 GVCGTCVVEILEGTDNLSEFSEAEQDFLGDPDSSNERLACQCCI 82
>gi|60681554|ref|YP_211698.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
fragilis NCTC 9343]
gi|60492988|emb|CAH07767.1| putative Na+-translocating NADH-quinone reductase subunit F
[Bacteroides fragilis NCTC 9343]
Length = 423
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L + T K + +WRL CQ V
Sbjct: 67 SACGGKGSCGQCRCQVLEGGGEILPTETGFFSR--KEQADHWRLGCQVKV 114
>gi|374619737|ref|ZP_09692271.1| ferredoxin [gamma proteobacterium HIMB55]
gi|374302964|gb|EHQ57148.1| ferredoxin [gamma proteobacterium HIMB55]
Length = 105
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDSTGL 169
++C GG CGTC + E L +E+ L +P N RL+CQ V DS G
Sbjct: 38 ADCGGGAVCGTCHCFIEESAGPLPDVDPQEESMLGLRPDREGNSRLSCQVQVS--DSIGD 95
Query: 170 VVIQQLPEWK 179
+ I +LPE++
Sbjct: 96 MTI-KLPEFQ 104
>gi|21674204|ref|NP_662269.1| chlorosome envelope protein I [Chlorobium tepidum TLS]
gi|21647368|gb|AAM72611.1| chlorosome envelope protein I [Chlorobium tepidum TLS]
Length = 244
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTVG 162
C G G C C + V EG + L TD EK L ++ R+ACQ T+
Sbjct: 33 CGGHGLCQACYITVQEGADCLAPLTDVEKAFLSPRQIAAGGRMACQATIA 82
>gi|380695173|ref|ZP_09860032.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
faecis MAJ27]
gi|380695202|ref|ZP_09860061.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
faecis MAJ27]
Length = 424
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 115
>gi|378823471|ref|ZP_09846101.1| ferredoxin, 2Fe-2S type, ISC system [Sutterella parvirubra YIT
11816]
gi|378597702|gb|EHY30960.1| ferredoxin, 2Fe-2S type, ISC system [Sutterella parvirubra YIT
11816]
Length = 111
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 40/103 (38%), Gaps = 20/103 (19%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H+ L P+GT F G R ++ N + C C TC V V E
Sbjct: 9 HAELCPEGTS---FEVPVGANLARALLENG--------IKIEHACEFSCACSTCHVYVRE 57
Query: 131 GKELLGSRTDKEKEKLKRKPKNW------RLACQTTVGTPDST 167
G E L D E + L W RL+CQTTVG D T
Sbjct: 58 GLETLNEPEDNELDHLDAA---WGAGLYSRLSCQTTVGEADIT 97
>gi|383112862|ref|ZP_09933647.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D2]
gi|313692747|gb|EFS29582.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D2]
Length = 424
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEAPHFSR--KQQQDHWRLGCQVKV 115
>gi|426402368|ref|YP_007021339.1| hypothetical protein Bdt_0364 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859036|gb|AFY00072.1| hypothetical protein Bdt_0364 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 96
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKE--KEKLKRKPKNWRLACQTTV 161
S+C G G C C + V+EG+E L + + E PK R++CQT V
Sbjct: 35 SSCDGDGVCAKCKIVVVEGQEHLSAENETECFLRDANNLPKEVRISCQTRV 85
>gi|298387705|ref|ZP_06997256.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_14]
gi|383122751|ref|ZP_09943441.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_6]
gi|251842146|gb|EES70226.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_6]
gi|298259561|gb|EFI02434.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_14]
Length = 424
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 115
>gi|29346565|ref|NP_810068.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
thetaiotaomicron VPI-5482]
gi|29338461|gb|AAO76262.1| Na+-translocating NADH-quinone reductase subunit [Bacteroides
thetaiotaomicron VPI-5482]
Length = 422
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 66 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 113
>gi|407455720|ref|YP_006734611.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci GR9]
gi|407458458|ref|YP_006736763.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci WS/RT/E30]
gi|405782263|gb|AFS21012.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci GR9]
gi|405785095|gb|AFS23841.1| ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia psittaci WS/RT/E30]
Length = 431
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
+H L D +T G+ L +L+S I + P C G TC C V+++
Sbjct: 38 IHPCKLKINDDDSLTKTVDSGRTLLSSLLDSGIPVPSP-------CGGKATCKQCKVKIV 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R K++L++ WRL+CQT V
Sbjct: 91 KNADQPLETDRATFSKQQLEQ---GWRLSCQTKV 121
>gi|374813444|ref|ZP_09717181.1| ferredoxin [Treponema primitia ZAS-1]
Length = 642
Score = 38.1 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 10/68 (14%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ L + + +D+ P C+G GTCG C V+V+EG L + E
Sbjct: 23 GETLLETARKAGVDIDAP-------CSGNGTCGKCRVKVLEGTVLGEAPRQISPEDYA-- 73
Query: 150 PKNWRLAC 157
WRLAC
Sbjct: 74 -AGWRLAC 80
>gi|344940465|ref|ZP_08779753.1| ferredoxin [Methylobacter tundripaludum SV96]
gi|344261657|gb|EGW21928.1| ferredoxin [Methylobacter tundripaludum SV96]
Length = 520
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 91 QKLRDIMLNSNIDLYGPYA-----RPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
+ L DI S +L+ A R S C G GTCG C V + +G ++ +++
Sbjct: 11 RHLADITFTSPCNLFNLLATYEHTRVRSACQGKGTCGLCQVRIDQGAASGLTQYEQKHLS 70
Query: 146 LKRKPKNWRLACQTTVGTPDSTGLV 170
+ + RLACQ T+ S L+
Sbjct: 71 AGQIAQGIRLACQMTLIDHASVSLI 95
>gi|294646743|ref|ZP_06724366.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD CC
2a]
gi|294807727|ref|ZP_06766520.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides
xylanisolvens SD CC 1b]
gi|292637903|gb|EFF56298.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD CC
2a]
gi|294445163|gb|EFG13837.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides
xylanisolvens SD CC 1b]
Length = 422
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 66 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 113
>gi|237721017|ref|ZP_04551498.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298484226|ref|ZP_07002391.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D22]
gi|299145401|ref|ZP_07038469.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_23]
gi|336405372|ref|ZP_08586051.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_30]
gi|423213332|ref|ZP_17199861.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides xylanisolvens CL03T12C04]
gi|229449852|gb|EEO55643.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|295084404|emb|CBK65927.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides xylanisolvens XB1A]
gi|298269639|gb|EFI11235.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D22]
gi|298515892|gb|EFI39773.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_23]
gi|335937953|gb|EGM99847.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_30]
gi|392693792|gb|EIY87022.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides xylanisolvens CL03T12C04]
Length = 424
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 115
>gi|15604778|ref|NP_219562.1| ferredoxin [Chlamydia trachomatis D/UW-3/CX]
gi|76788772|ref|YP_327858.1| ferredoxin [Chlamydia trachomatis A/HAR-13]
gi|237802493|ref|YP_002887687.1| ferredoxin [Chlamydia trachomatis B/Jali20/OT]
gi|237804408|ref|YP_002888562.1| ferredoxin [Chlamydia trachomatis B/TZ1A828/OT]
gi|255310861|ref|ZP_05353431.1| ferredoxin [Chlamydia trachomatis 6276]
gi|255317161|ref|ZP_05358407.1| ferredoxin [Chlamydia trachomatis 6276s]
gi|255348422|ref|ZP_05380429.1| ferredoxin [Chlamydia trachomatis 70]
gi|255502964|ref|ZP_05381354.1| ferredoxin [Chlamydia trachomatis 70s]
gi|255506633|ref|ZP_05382272.1| ferredoxin [Chlamydia trachomatis D(s)2923]
gi|376282068|ref|YP_005155894.1| ferredoxin [Chlamydia trachomatis A2497]
gi|385239571|ref|YP_005807413.1| ferredoxin [Chlamydia trachomatis G/9768]
gi|385240492|ref|YP_005808333.1| ferredoxin [Chlamydia trachomatis G/11222]
gi|385241420|ref|YP_005809260.1| ferredoxin [Chlamydia trachomatis E/11023]
gi|385242347|ref|YP_005810186.1| ferredoxin [Chlamydia trachomatis G/9301]
gi|385243266|ref|YP_005811112.1| Ferredoxin [Chlamydia trachomatis D-EC]
gi|385244146|ref|YP_005811990.1| Ferredoxin [Chlamydia trachomatis D-LC]
gi|385245030|ref|YP_005813853.1| ferredoxin [Chlamydia trachomatis E/150]
gi|385245957|ref|YP_005814779.1| ferredoxin [Chlamydia trachomatis G/11074]
gi|385269709|ref|YP_005812869.1| Ferredoxin [Chlamydia trachomatis A2497]
gi|386262416|ref|YP_005815695.1| ferredoxin [Chlamydia trachomatis Sweden2]
gi|389857757|ref|YP_006359999.1| ferredoxin [Chlamydia trachomatis F/SW4]
gi|389858630|ref|YP_006360871.1| ferredoxin [Chlamydia trachomatis E/SW3]
gi|389859508|ref|YP_006361748.1| ferredoxin [Chlamydia trachomatis F/SW5]
gi|3328452|gb|AAC67650.1| Ferredoxin [Chlamydia trachomatis D/UW-3/CX]
gi|76167302|gb|AAX50310.1| ferredoxin [Chlamydia trachomatis A/HAR-13]
gi|231272708|emb|CAX09612.1| ferredoxin [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273727|emb|CAX10506.1| ferredoxin [Chlamydia trachomatis B/Jali20/OT]
gi|289525104|emb|CBJ14575.1| ferredoxin [Chlamydia trachomatis Sweden2]
gi|296434646|gb|ADH16824.1| ferredoxin [Chlamydia trachomatis E/150]
gi|296435576|gb|ADH17750.1| ferredoxin [Chlamydia trachomatis G/9768]
gi|296436500|gb|ADH18670.1| ferredoxin [Chlamydia trachomatis G/11222]
gi|296437436|gb|ADH19597.1| ferredoxin [Chlamydia trachomatis G/11074]
gi|296438363|gb|ADH20516.1| ferredoxin [Chlamydia trachomatis E/11023]
gi|297139935|gb|ADH96693.1| ferredoxin [Chlamydia trachomatis G/9301]
gi|297748189|gb|ADI50735.1| Ferredoxin [Chlamydia trachomatis D-EC]
gi|297749069|gb|ADI51747.1| Ferredoxin [Chlamydia trachomatis D-LC]
gi|347974849|gb|AEP34870.1| Ferredoxin [Chlamydia trachomatis A2497]
gi|371908098|emb|CAX08718.1| ferredoxin [Chlamydia trachomatis A2497]
gi|380248828|emb|CCE14113.1| ferredoxin [Chlamydia trachomatis F/SW5]
gi|380249704|emb|CCE13224.1| ferredoxin [Chlamydia trachomatis F/SW4]
gi|380250579|emb|CCE12335.1| ferredoxin [Chlamydia trachomatis E/SW3]
gi|407651567|gb|AFU24076.1| ferredoxin [Chlamydia trachomatis]
gi|407651570|gb|AFU24078.1| ferredoxin [Chlamydia trachomatis]
gi|407651573|gb|AFU24080.1| ferredoxin [Chlamydia trachomatis]
gi|407651576|gb|AFU24082.1| ferredoxin [Chlamydia trachomatis]
gi|407651579|gb|AFU24084.1| ferredoxin [Chlamydia trachomatis]
gi|407651582|gb|AFU24086.1| ferredoxin [Chlamydia trachomatis]
gi|407651585|gb|AFU24088.1| ferredoxin [Chlamydia trachomatis]
gi|407651588|gb|AFU24090.1| ferredoxin [Chlamydia trachomatis]
gi|407651591|gb|AFU24092.1| ferredoxin [Chlamydia trachomatis]
gi|408777325|gb|AFU90694.1| ferredoxin [Chlamydia trachomatis]
gi|408777329|gb|AFU90697.1| ferredoxin [Chlamydia trachomatis]
gi|408777333|gb|AFU90700.1| ferredoxin [Chlamydia trachomatis]
gi|438689978|emb|CCP49235.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis A/7249]
gi|438691062|emb|CCP48336.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis A/5291]
gi|438692434|emb|CCP47436.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis A/363]
gi|440524974|emb|CCP50225.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis K/SotonK1]
gi|440526757|emb|CCP52241.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis D/SotonD1]
gi|440527650|emb|CCP53134.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis D/SotonD5]
gi|440528541|emb|CCP54025.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis D/SotonD6]
gi|440529433|emb|CCP54917.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis E/SotonE4]
gi|440530326|emb|CCP55810.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis E/SotonE8]
gi|440531223|emb|CCP56733.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis F/SotonF3]
gi|440532114|emb|CCP57624.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis G/SotonG1]
gi|440533006|emb|CCP58516.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis Ia/SotonIa1]
gi|440533900|emb|CCP59410.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis Ia/SotonIa3]
gi|440534795|emb|CCP60305.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis E/Bour]
Length = 91
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQTTV 161
G CGTC++EV+EG + L ++ E + L + N RLACQ +
Sbjct: 39 GVCGTCVIEVLEGADNLSDFSEAEYDFLGDPEDSNERLACQCCI 82
>gi|334121548|ref|ZP_08495614.1| ferredoxin [Microcoleus vaginatus FGP-2]
gi|333454934|gb|EGK83606.1| ferredoxin [Microcoleus vaginatus FGP-2]
Length = 160
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKPKNWRLACQTTVGTPDSTG 168
L C G G C TC V + EG E L +E+ E + N RLACQ + G
Sbjct: 34 LKECGGRGMCATCHVYIKEGMEGLSDMNRRERRTLEVITTAKANSRLACQAQI-----MG 88
Query: 169 LVVIQQLP 176
V+ QLP
Sbjct: 89 EGVVVQLP 96
>gi|160886019|ref|ZP_02067022.1| hypothetical protein BACOVA_04025 [Bacteroides ovatus ATCC 8483]
gi|423286989|ref|ZP_17265840.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL02T12C04]
gi|423297991|ref|ZP_17276051.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL03T12C18]
gi|156108832|gb|EDO10577.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus ATCC
8483]
gi|392664628|gb|EIY58166.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL03T12C18]
gi|392673821|gb|EIY67276.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL02T12C04]
Length = 424
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 115
>gi|374605717|ref|ZP_09678635.1| ferredoxin [Paenibacillus dendritiformis C454]
gi|374388712|gb|EHQ60116.1| ferredoxin [Paenibacillus dendritiformis C454]
Length = 100
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
GTC C +++ G + LG TD E +++ + +RLACQTTV
Sbjct: 41 GTCARCRCQIVSGYDNLGDVTDAEWNRMEEDEFHQGYRLACQTTV 85
>gi|262407908|ref|ZP_06084456.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_22]
gi|293373021|ref|ZP_06619390.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD
CMC 3f]
gi|336416350|ref|ZP_08596685.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus 3_8_47FAA]
gi|345511614|ref|ZP_08791154.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D1]
gi|229443951|gb|EEO49742.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D1]
gi|262354716|gb|EEZ03808.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_22]
gi|292632089|gb|EFF50698.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD
CMC 3f]
gi|335938767|gb|EGN00651.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus 3_8_47FAA]
Length = 424
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEVPHFSR--KQQQDHWRLGCQVKV 115
>gi|89094307|ref|ZP_01167248.1| Na(+)-translocating NADH-quinone reductase subunit F
[Neptuniibacter caesariensis]
gi|89081366|gb|EAR60597.1| Na(+)-translocating NADH-quinone reductase subunit F
[Oceanospirillum sp. MED92]
Length = 408
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSR--TDKEKEKLKRKPKNWRLACQTTV 161
S C GGGTC C EV G GS T++ ++ + WRL+CQ V
Sbjct: 69 SACGGGGTCAQCACEVHSGG---GSMLPTEESHFTMREAKEGWRLSCQVAV 116
>gi|442770320|gb|AGC71039.1| iron-sulfur cluster-binding protein [uncultured bacterium
A1Q1_fos_1231]
Length = 167
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTV 161
C G G C TC V V+EG + L T +EK L + N RLACQ V
Sbjct: 36 CGGKGLCATCHVYVMEGSDKLSPITPREKLALPMLAELQPNSRLACQAKV 85
>gi|440682589|ref|YP_007157384.1| ferredoxin [Anabaena cylindrica PCC 7122]
gi|428679708|gb|AFZ58474.1| ferredoxin [Anabaena cylindrica PCC 7122]
Length = 95
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 118 GGTCGTCMVEVIEGKELLGSRTDKEKEKLK-RKPKN--WRLACQTTV 161
G CGTC++EV+ G E L +KE+ L PKN R+ACQ V
Sbjct: 39 SGVCGTCLIEVVSGIENLSPIMEKEQILLDILAPKNPLIRVACQCVV 85
>gi|13878452|sp|O68988.1|CSMI_CHLTE RecName: Full=Chlorosome protein I
gi|3089171|gb|AAC14875.1| chlorosome envelope protein I [Chlorobaculum tepidum]
Length = 244
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTVG 162
C G G C C + V EG + L TD EK L ++ R+ACQ T+
Sbjct: 33 CGGHGLCQACYITVQEGADCLAPLTDVEKAFLSPRQIAAGGRIACQATIA 82
>gi|374384275|ref|ZP_09641801.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Odoribacter laneus YIT 12061]
gi|373228882|gb|EHP51185.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Odoribacter laneus YIT 12061]
Length = 422
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
S C G G+CG C +V+ G GS E K++ NWRLACQ V
Sbjct: 74 SACGGKGSCGMCKCQVLSGA---GSILPTETGFFSYKQQHDNWRLACQVKV 121
>gi|424811603|ref|ZP_18236854.1| ferredoxin [Candidatus Nanosalinarum sp. J07AB56]
gi|339757329|gb|EGQ40910.1| ferredoxin [Candidatus Nanosalinarum sp. J07AB56]
Length = 100
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ + D +L++ ID + C G C TC VEV +G + L D E+ LKR
Sbjct: 18 GETVLDALLDNGIDW-------MHACGGFCNCTTCAVEVEDGWDNLSDMEDSERNTLKRF 70
Query: 150 PKN------WRLACQTTV 161
+ +RL+CQ V
Sbjct: 71 QGDEALDGSFRLSCQAVV 88
>gi|423299691|ref|ZP_17277716.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides finegoldii CL09T03C10]
gi|408473500|gb|EKJ92022.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides finegoldii CL09T03C10]
Length = 424
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEIPHFSR--KQQQDHWRLGCQVKV 115
>gi|402493579|ref|ZP_10840330.1| Na(+)-translocating NADH-quinone reductase subunit F [Aquimarina
agarilytica ZC1]
Length = 435
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C GGGTC C +V+EG G E+ RK WRL CQ V
Sbjct: 73 SACGGGGTCVQCKCQVLEGG---GDLLPTEEPHFTRKEAAAGWRLGCQVKV 120
>gi|255691834|ref|ZP_05415509.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides finegoldii DSM 17565]
gi|260622557|gb|EEX45428.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides finegoldii
DSM 17565]
Length = 424
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K++ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLEGGGEILPSEIPHFSR--KQQQDHWRLGCQVKV 115
>gi|427542468|gb|AFY63003.1| ferredoxin [Dietzia sp. DQ12-45-1b]
Length = 111
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI-EGKELLGSRTDKEKEKLKR 148
GQ L I +N+ + ++C G CGTC V V + E +G E+E L
Sbjct: 26 GQSLMRIAVNNAVPGID------ADCGGEAACGTCHVIVDPQWSEQVGLSGASEEEMLAM 79
Query: 149 KPKNW---RLACQTTVGTPDSTGLVVIQQLPEWK 179
P+ RL+CQ T + D GLVV Q+PE++
Sbjct: 80 NPERLPTSRLSCQMT-ASADWDGLVV--QVPEFQ 110
>gi|53802537|ref|YP_112787.1| (2Fe-2S) ferredoxin [Methylococcus capsulatus str. Bath]
gi|53756298|gb|AAU90589.1| ferredoxin, 2Fe-2S [Methylococcus capsulatus str. Bath]
Length = 112
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 19/111 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H+ L P+G A GQ + D +L+ I + C C TC V V E
Sbjct: 9 HAELCPEGA----VIKASYGQSICDALLHGGIGIE-------HACEMACACSTCHVIVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G E L D E + L R + RLACQ V D ++ +LP +
Sbjct: 58 GYESLNPADDAEDDMLDRAWGLEPHSRLACQAVVSKAD-----LVIELPRY 103
>gi|145219955|ref|YP_001130664.1| ferredoxin [Chlorobium phaeovibrioides DSM 265]
gi|145206119|gb|ABP37162.1| ferredoxin [Chlorobium phaeovibrioides DSM 265]
Length = 179
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
C G C TC + EG ELL + E E L RLACQ T+ P + +V
Sbjct: 33 CGGNALCQTCYSRITEGAELLSPLNEIELEILSPNLIQAGTRLACQATIEKPGTIAMV 90
>gi|299066990|emb|CBJ38185.1| Fe-S clusters assembly [2FE-2S] ferredoxin [Ralstonia solanacearum
CMR15]
gi|344174182|emb|CCA85964.1| Fe-S clusters assembly (2FE-2S) ferredoxin [Ralstonia syzygii R24]
Length = 112
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G + D +L ++I++ C C TC V V EG + LG T+KE++ L +
Sbjct: 24 GTSICDALLGAHIEIE-------HACEKSCACTTCHVIVREGFDSLGDATEKEEDLLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDST 167
N RL+CQ V D T
Sbjct: 77 WGLEPNSRLSCQAKVADEDLT 97
>gi|261867566|ref|YP_003255488.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|365967354|ref|YP_004948916.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|387120476|ref|YP_006286359.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415763537|ref|ZP_11482144.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|415769231|ref|ZP_11484082.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416032087|ref|ZP_11572720.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416050646|ref|ZP_11577022.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|416067132|ref|ZP_11582181.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|418465210|ref|ZP_13036147.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|444334429|ref|ZP_21149979.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|444345163|ref|ZP_21153186.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261412898|gb|ACX82269.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|347993836|gb|EGY35165.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|348000466|gb|EGY41250.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|348002303|gb|EGY43005.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348654526|gb|EGY70136.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348657590|gb|EGY75178.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|359756142|gb|EHK90301.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|365746267|gb|AEW77172.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|385874968|gb|AFI86527.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|443543303|gb|ELT53560.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443550413|gb|ELT58724.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 113
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V V E
Sbjct: 5 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIH-------HACDGSCACTTCHVVVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L D+E++ L + + RL+CQ +G D ++ ++P++
Sbjct: 58 GGDSLNEPCDQEEDMLDKAWGLEIDSRLSCQCIIGDED-----LVVEIPKYN 104
>gi|225011509|ref|ZP_03701947.1| NADH:ubiquinone oxidoreductase, subunit F [Flavobacteria bacterium
MS024-2A]
gi|225004012|gb|EEG41984.1| NADH:ubiquinone oxidoreductase, subunit F [Flavobacteria bacterium
MS024-2A]
Length = 431
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C GGGTC C +V+EG G E RK + WRL CQ V
Sbjct: 68 SACGGGGTCIQCKCQVLEGG---GEILPTEAPHFSRKEVAEGWRLGCQVKV 115
>gi|433427727|ref|ZP_20407092.1| ferredoxin-like protein, partial [Haloferax sp. BAB2207]
gi|432196150|gb|ELK52630.1| ferredoxin-like protein, partial [Haloferax sp. BAB2207]
Length = 74
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 80 PDIHFR---TACG-GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
P +HFR C G LRD++ + + ++ NC GGG+CGTC V V + +
Sbjct: 2 PTVHFRGREIECDRGDVLRDVLRAAGESPHNGHS-SWFNCRGGGSCGTCAVRV---RGPV 57
Query: 136 GSRTDKEKEKLK 147
RT KE+ +L+
Sbjct: 58 TYRTKKERRRLR 69
>gi|302343708|ref|YP_003808237.1| ferredoxin [Desulfarculus baarsii DSM 2075]
gi|301640321|gb|ADK85643.1| ferredoxin [Desulfarculus baarsii DSM 2075]
Length = 647
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPD 165
++C G G CG C V+V+ G+ G + EK + + +RLAC TT+ T D
Sbjct: 33 ASCGGSGVCGKCRVKVLSGQFTGG---ESEKISAEDAAQGYRLAC-TTIPTSD 81
>gi|448539635|ref|ZP_21623101.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-646]
gi|448548855|ref|ZP_21627748.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-645]
gi|448555924|ref|ZP_21631782.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-644]
gi|445710377|gb|ELZ62192.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-646]
gi|445713948|gb|ELZ65720.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-645]
gi|445717209|gb|ELZ68929.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-644]
Length = 123
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLS--NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK 147
G LRD +L++ I PYAR NC G G C TC V V G+ D + L
Sbjct: 39 GTVLRDALLDAGI---SPYARLTKRVNCGGRGLCATCGVRVRSGEPT----PDHWHDDLA 91
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
+ RL+CQ V P + LV + W G E
Sbjct: 92 ARFGYPRLSCQLRVDGPMTVELV---EKVVWGGRE 123
>gi|444347740|ref|ZP_21155564.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443548247|gb|ELT57540.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 110
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 73 VLLPDG--TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
+ LP+ P+ A G L ++ N+ ++++ C G C TC V V E
Sbjct: 2 IFLPNEEFCPEGMVVDAAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVVRE 54
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
G + L D+E++ L + + RL+CQ +G D LVV ++P++
Sbjct: 55 GGDSLNEPCDQEEDMLDKAWGLEIDSRLSCQCIIGDED---LVV--EIPKYN 101
>gi|404256895|ref|ZP_10960226.1| putative 2Fe-2S ferredoxin [Gordonia namibiensis NBRC 108229]
gi|403404567|dbj|GAB98635.1| putative 2Fe-2S ferredoxin [Gordonia namibiensis NBRC 108229]
Length = 106
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 114 NCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKRKP---KNWRLACQTTVGTPDSTGL 169
+C G CGTC V + + GSR E + L+ P +N RL+CQ + + + GL
Sbjct: 39 DCGGDAACGTCHVMIDQQWAAATGSRNATEAQMLEMNPDCQENSRLSCQIAL-SAEHDGL 97
Query: 170 VVIQQLPEWK 179
VV LPE++
Sbjct: 98 VV--NLPEFQ 105
>gi|17545744|ref|NP_519146.1| (2Fe-2S) ferredoxin [Ralstonia solanacearum GMI1000]
gi|17428038|emb|CAD14727.1| probable ferredoxin [2fe-2s] protein [Ralstonia solanacearum
GMI1000]
Length = 112
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G + D +L ++I++ C C TC V V EG + LG T+KE++ L +
Sbjct: 24 GTSICDALLGAHIEIE-------HACEKSCACTTCHVIVREGFDSLGEATEKEEDLLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDST 167
N RL+CQ V D T
Sbjct: 77 WGLEPNSRLSCQAKVADEDLT 97
>gi|387790123|ref|YP_006255188.1| ferredoxin [Solitalea canadensis DSM 3403]
gi|379652956|gb|AFD06012.1| ferredoxin [Solitalea canadensis DSM 3403]
Length = 110
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR- 148
G+ + D+ L ++I+L NC G C TC + V+ G + + +DKE++ + R
Sbjct: 25 GESVLDVALENDIELQ-------HNCGGVCGCSTCHIYVLNGMDNIQDISDKEEDFIDRA 77
Query: 149 -KPK-NWRLACQTT-------VGTPDSTGLV 170
PK RL CQ + PD +G +
Sbjct: 78 VNPKITSRLGCQCVIIDGNIEIMVPDQSGFM 108
>gi|448476218|ref|ZP_21603382.1| ferredoxin [Halorubrum aidingense JCM 13560]
gi|445815767|gb|EMA65686.1| ferredoxin [Halorubrum aidingense JCM 13560]
Length = 104
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 14/79 (17%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV---IEGKELLGSRTDKEKEKL 146
G LRD++ + + +Y + NC G G+CGTC V+V + EL KEK +L
Sbjct: 16 GAVLRDVLNEAGLSVYNGRSAQF-NCRGMGSCGTCAVKVDGEVSEPEL------KEKARL 68
Query: 147 KRKP----KNWRLACQTTV 161
P + RLACQT V
Sbjct: 69 WFPPHHPSHDVRLACQTRV 87
>gi|386389960|ref|ZP_10074757.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus
paraphrohaemolyticus HK411]
gi|387773059|ref|ZP_10128657.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parahaemolyticus
HK385]
gi|385694002|gb|EIG24628.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus
paraphrohaemolyticus HK411]
gi|386905548|gb|EIJ70310.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parahaemolyticus
HK385]
Length = 113
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G L ++ N+ ++++ C G C TC V + EG + L +D+E++ L +
Sbjct: 24 GDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVIREGFDSLNESSDQEEDMLDKA 76
Query: 150 ---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
RL+CQ +G D ++ ++P++
Sbjct: 77 WGLEMESRLSCQCVIGDED-----LVVEIPKY 103
>gi|409098300|ref|ZP_11218324.1| ferredoxin [Pedobacter agri PB92]
Length = 110
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 17/91 (18%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR- 148
G+ + D+ L++ I+L NC G C TC V V +G + + +DKE++ + R
Sbjct: 25 GESVLDVCLDNGIELQ-------HNCGGVCGCSTCHVYVTKGMDNIEEISDKEEDFIDRA 77
Query: 149 -KPK-NWRLACQTT-------VGTPDSTGLV 170
+P+ RL CQ V PD +G +
Sbjct: 78 VRPRITSRLGCQCVVIDGDIEVTIPDQSGFM 108
>gi|403049441|ref|ZP_10903925.1| Na(+)-translocating NADH-quinone reductase subunit F, partial
[SAR86 cluster bacterium SAR86D]
Length = 402
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQTTV 161
S C GGGTC C V++G GS E+ + +N WRL+CQ V
Sbjct: 69 SACGGGGTCSQCKCVVLDGG---GSILPTEESHFNSRERNEGWRLSCQVPV 116
>gi|224367812|ref|YP_002601975.1| Na(+)-translocating NADH-quinone reductase subunit F
[Desulfobacterium autotrophicum HRM2]
gi|223690528|gb|ACN13811.1| NqrF [Desulfobacterium autotrophicum HRM2]
Length = 403
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C EVI+G GS E L RK K RLACQ V
Sbjct: 67 SACGGSGSCGMCKCEVIKGG---GSILPTELGHLSRKEKLAGKRLACQLKV 114
>gi|116621789|ref|YP_823945.1| ferredoxin [Candidatus Solibacter usitatus Ellin6076]
gi|116224951|gb|ABJ83660.1| ferredoxin [Candidatus Solibacter usitatus Ellin6076]
Length = 546
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 103 DLYGPYARPL-SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
DL P+ ++C G C C+VE+ EG E L +RT+ E+ L+ N+RL+CQ +
Sbjct: 22 DLAASIGIPVPTSCRKQGKCKECIVEISEGMESLTARTEAERH-LR---GNFRLSCQAAI 77
>gi|374582475|ref|ZP_09655569.1| putative metal-binding protein [Desulfosporosinus youngiae DSM
17734]
gi|374418557|gb|EHQ90992.1| putative metal-binding protein [Desulfosporosinus youngiae DSM
17734]
Length = 615
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C G G CG C V+VIEG L T E+ +L R+ RLAC T +
Sbjct: 38 CGGMGKCGKCRVKVIEG---LAKPTSAEQSRLTRQELEDGIRLACMTEI 83
>gi|146340350|ref|YP_001205398.1| hypothetical protein BRADO3377 [Bradyrhizobium sp. ORS 278]
gi|146193156|emb|CAL77168.1| conserved hypothetical protein; putative Ferredoxin-and
Adenylate/Guanylate cyclase-like domains [Bradyrhizobium
sp. ORS 278]
Length = 568
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQT 159
LS C G CG C V + EG L + E+ L + P+N RLACQ
Sbjct: 289 LSECGGRARCGRCRVRIEEGASTLAAPGAAERGLLAGLKAPENVRLACQI 338
>gi|300087914|ref|YP_003758436.1| ferredoxin [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527647|gb|ADJ26115.1| ferredoxin [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 632
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 22/93 (23%)
Query: 73 VLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGK 132
+L+PDG TA G L D++ + + + C G G CGTC V V+E
Sbjct: 10 MLMPDGL----ILTASQGDNLLDLLRKGGVGI-------AAACGGDGICGTCRV-VVEQG 57
Query: 133 ELLGSR----TDKEKEKLKRKPKNWRLACQTTV 161
E+ GS TD+E +RLAC + V
Sbjct: 58 EVAGSDRGMLTDEEYN------AGYRLACMSEV 84
>gi|292655868|ref|YP_003535765.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax volcanii DS2]
gi|433419685|ref|ZP_20405324.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. BAB2207]
gi|448289857|ref|ZP_21481019.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax volcanii DS2]
gi|448570487|ref|ZP_21639317.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax lucentense DSM 14919]
gi|448595447|ref|ZP_21653150.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax alexandrinus JCM 10717]
gi|291371179|gb|ADE03406.1| 2Fe-2S iron-sulfur cluster binding domain protein [Haloferax
volcanii DS2]
gi|432199384|gb|ELK55565.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. BAB2207]
gi|445581039|gb|ELY35403.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax volcanii DS2]
gi|445723134|gb|ELZ74781.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax lucentense DSM 14919]
gi|445742901|gb|ELZ94391.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax alexandrinus JCM 10717]
Length = 123
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLS--NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK 147
G LRD +L++ I PYAR NC G G C TC V V G+ D + L
Sbjct: 39 GTVLRDALLDAGI---SPYARLTKRVNCGGRGLCATCGVRVRSGEPT----PDHWHDDLA 91
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
+ RL+CQ V P + LV + W G E
Sbjct: 92 ARFGYPRLSCQLRVDGPLTVELV---EKVVWGGRE 123
>gi|226312041|ref|YP_002771935.1| ferredoxin [Brevibacillus brevis NBRC 100599]
gi|226094989|dbj|BAH43431.1| putative ferredoxin [Brevibacillus brevis NBRC 100599]
Length = 98
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQTTVGTPDSTGLVVIQQLP 176
G C C +V+EG E L T +EK +L++ + +RL CQT V S+G V + P
Sbjct: 41 GVCAQCRTQVLEGAEYLNEVTPEEKLRLRKAERTDGYRLGCQTKV---VSSGTVKVAHRP 97
>gi|346993707|ref|ZP_08861779.1| adenylate/guanylate cyclase [Ruegeria sp. TW15]
Length = 551
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQ 158
C G G C TC V V EG + L T+ E LK PK RLACQ
Sbjct: 279 CGGKGRCTTCRVVVEEGADQLHPPTEVEARSLKAVSAPKGTRLACQ 324
>gi|300704646|ref|YP_003746249.1| Fe-S clusters assembly [2fe-2S] ferredoxin [Ralstonia solanacearum
CFBP2957]
gi|299072310|emb|CBJ43643.1| Fe-S clusters assembly [2FE-2S] ferredoxin [Ralstonia solanacearum
CFBP2957]
Length = 95
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 104 LYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK---PKNWRLACQTT 160
L G + C C TC V V EG + LG T+KE++ L + N RL+CQ
Sbjct: 14 LLGAHIEIEHACEKSCACTTCHVIVREGFDSLGEATEKEEDLLDKAWGLEPNSRLSCQAK 73
Query: 161 VGTPDSTGLVVIQQLPEW 178
V D +I ++P++
Sbjct: 74 VADED-----LIVEIPKY 86
>gi|374996014|ref|YP_004971513.1| metal-binding protein [Desulfosporosinus orientis DSM 765]
gi|357214380|gb|AET68998.1| putative metal-binding protein [Desulfosporosinus orientis DSM 765]
Length = 625
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C GTCG C+ I ++ GS T E+EK+ + WRLACQTTV
Sbjct: 49 CGRRGTCGKCL---ILCRDYSGSPTIVEEEKITNILLEQGWRLACQTTV 94
>gi|78186511|ref|YP_374554.1| chlorosome envelope protein J [Chlorobium luteolum DSM 273]
gi|78166413|gb|ABB23511.1| chlorosome envelope protein J [Chlorobium luteolum DSM 273]
Length = 226
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C G G C +C V V EG E L ++ EK + K + RLACQT +
Sbjct: 33 CGGNGICQSCFVYVQEGMEHLSPLSNVEKACISEKLLAEGGRLACQTVI 81
>gi|416054577|ref|ZP_11579220.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416080499|ref|ZP_11586266.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|416103663|ref|ZP_11589525.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348003486|gb|EGY44086.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348007808|gb|EGY48097.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348011224|gb|EGY51197.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 97
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G L ++ N+ ++++ C G C TC V V EG + L D+E++ L
Sbjct: 5 AAAGDNLLEVAHNAGVEIHHA-------CDGSCACTTCHVVVREGGDSLNEPCDQEEDML 57
Query: 147 KRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWK 179
+ + RL+CQ +G D LVV ++P++
Sbjct: 58 DKAWGLEIDSRLSCQCIIGDED---LVV--EIPKYN 88
>gi|300692012|ref|YP_003753007.1| Fe-S clusters assembly [2FE-2S] ferredoxin [Ralstonia solanacearum
PSI07]
gi|299079072|emb|CBJ51734.1| Fe-S clusters assembly [2FE-2S] ferredoxin [Ralstonia solanacearum
PSI07]
gi|344170633|emb|CCA83056.1| Fe-S clusters assembly (2FE-2S) ferredoxin [blood disease bacterium
R229]
Length = 95
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 104 LYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK---PKNWRLACQTT 160
L G + C C TC V V EG + LG T+KE++ L + N RL+CQ
Sbjct: 14 LLGAHIEIEHACEKSCACTTCHVIVREGFDSLGDATEKEEDLLDKAWGLEPNSRLSCQAK 73
Query: 161 VGTPDST 167
V D T
Sbjct: 74 VADEDLT 80
>gi|124003611|ref|ZP_01688460.1| ferredoxin, 2Fe-2S type [Microscilla marina ATCC 23134]
gi|123991180|gb|EAY30632.1| ferredoxin, 2Fe-2S type [Microscilla marina ATCC 23134]
Length = 108
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 23/97 (23%)
Query: 99 NSNIDLYGP-----------YARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEK--EK 145
N +DLY P Y + C G G C TC + V G + L T E+ +
Sbjct: 11 NQEVDLYDPNKSVLQHLGEAYIDWMQACGGKGRCTTCAMVVHNGTQYLNVLTAAEEKFKN 70
Query: 146 LKRKPKNWRLACQTTVGTPDSTGLVVIQ-----QLPE 177
L R N RLACQ ++G +VI QLP
Sbjct: 71 LGRLNSNQRLACQCV-----ASGDIVISTPEKYQLPH 102
>gi|51893893|ref|YP_076584.1| ferredoxin-like protein [Symbiobacterium thermophilum IAM 14863]
gi|51857582|dbj|BAD41740.1| ferredoxin-like protein [Symbiobacterium thermophilum IAM 14863]
Length = 233
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRK-PKNWRLACQTTVGTP 164
G C TC + V++G E L D+E+E L K + +RL CQ T P
Sbjct: 182 GVCDTCQIRVLKGMENLSPVNDREREMLGDKINQGYRLCCQVTAHGP 228
>gi|291280396|ref|YP_003497231.1| hypothetical protein DEFDS_2025 [Deferribacter desulfuricans SSM1]
gi|290755098|dbj|BAI81475.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 511
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 20/101 (19%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPL-SNCAGGGTCGTCMVEVI--EGKELLGSRTDKEK 143
A G L ++++N+ I P+ S C G G CG C V+++ +GKE + T K++
Sbjct: 20 AKSGSNLFEVLINNGI--------PIESLCKGSGQCGKCKVKIVSADGKE-INKPTKKDR 70
Query: 144 EKLKR--KPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
L + +RLACQ V + VI EW E
Sbjct: 71 LILAKINLDNGYRLACQYIVKSD------VIVDTEEWIVEE 105
>gi|410996242|gb|AFV97707.1| ferredoxin [uncultured Sulfuricurvum sp. RIFRC-1]
Length = 96
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLK----RKPKNWRLACQTTVGTPDSTGLVVIQ 173
G CGTC+V + G E + +KEK LK PK RLACQ V P+ GLV I+
Sbjct: 40 GECGTCVVMIESGMEYMSEINEKEKAVLKTLNESNPK-ARLACQMKVIAPN--GLVRIK 95
>gi|348027090|ref|YP_004766895.1| ferredoxin [Megasphaera elsdenii DSM 20460]
gi|341823144|emb|CCC74068.1| ferredoxin [Megasphaera elsdenii DSM 20460]
Length = 708
Score = 37.7 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 79 TPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSR 138
+ ++H T GG ++ D + L P C G G CG C V V++G L +
Sbjct: 201 SQEVHI-TCPGGCRVHDYIQAQGTALALP-------CGGKGMCGKCRVRVVQGT-LPVTP 251
Query: 139 TDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQ 174
D+ ++ + WRLAC+ T D+ LVV Q
Sbjct: 252 EDRRIFSDEQLAQGWRLACKAV--TCDAVELVVPVQ 285
>gi|296131611|ref|YP_003638858.1| ferredoxin [Thermincola potens JR]
gi|296030189|gb|ADG80957.1| ferredoxin [Thermincola potens JR]
Length = 541
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G + + L +NI L GP C G GTCG C V K L + T+ E L K
Sbjct: 24 GISVLEAALQNNIPLEGP-------CNGKGTCGKCRVRY---KGTLSAPTETETRILGPK 73
Query: 150 P-KNWRLACQTTV 161
WRLACQ V
Sbjct: 74 VGAGWRLACQARV 86
>gi|94263595|ref|ZP_01287405.1| Ferredoxin [delta proteobacterium MLMS-1]
gi|93456015|gb|EAT06166.1| Ferredoxin [delta proteobacterium MLMS-1]
Length = 637
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQ 174
C G G CG C V + +G E++ S+ +KE + RLACQ++V + LVV +
Sbjct: 36 CGGDGVCGKCKVAIEQG-EVISSQGQLKKED---QEAGRRLACQSSV----KSDLVV--R 85
Query: 175 LPEWKGHEWKYKK 187
+PE G + K K
Sbjct: 86 IPEATGQDGKALK 98
>gi|83941907|ref|ZP_00954369.1| phenylacetic acid degradation oxidoreductase PaaK [Sulfitobacter
sp. EE-36]
gi|83847727|gb|EAP85602.1| phenylacetic acid degradation oxidoreductase PaaK [Sulfitobacter
sp. EE-36]
Length = 354
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T GQ + D L +N+D P+A G C TCM +V EG+ + S E
Sbjct: 275 HSFTMAKGQSVLDAALENNLD--APFA------CKAGVCSTCMCKVTEGEVEMLSNHALE 326
Query: 143 KEKLKRKPKNWRLACQT 159
+++R +RL+CQ+
Sbjct: 327 DYEVER---GYRLSCQS 340
>gi|402572978|ref|YP_006622321.1| metal-binding protein [Desulfosporosinus meridiei DSM 13257]
gi|402254175|gb|AFQ44450.1| putative metal-binding protein [Desulfosporosinus meridiei DSM
13257]
Length = 636
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G GTCG C V V+ G ++ + E+L K RLAC+T +
Sbjct: 36 SGCGGKGTCGACKVVVLSGDPIIEGTGNLTPEQLS---KGIRLACKTLI 81
>gi|347754687|ref|YP_004862251.1| ferredoxin [Candidatus Chloracidobacterium thermophilum B]
gi|347587205|gb|AEP11735.1| Ferredoxin [Candidatus Chloracidobacterium thermophilum B]
Length = 157
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR---KPKNWRLACQTTVGTPDSTGLVV 171
C G G C TC V VI+G+E L RT++E L RL+CQ + G V
Sbjct: 36 CGGMGLCATCHVFVIKGEESLTPRTEREIRTLATITGATARSRLSCQARI-----IGDGV 90
Query: 172 IQQLPE 177
+ +LPE
Sbjct: 91 VVELPE 96
>gi|320103758|ref|YP_004179349.1| ferredoxin [Isosphaera pallida ATCC 43644]
gi|319751040|gb|ADV62800.1| ferredoxin [Isosphaera pallida ATCC 43644]
Length = 157
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDSTG 168
L +C G G C TC V + EG + L RT++E L RLACQ V G
Sbjct: 33 LMSCGGKGLCSTCHVYIKEGMDRLTPRTERENRTLSYVTSVTPQSRLACQCRV-----LG 87
Query: 169 LVVIQQLPE 177
V+ +LPE
Sbjct: 88 EGVVVELPE 96
>gi|148554677|ref|YP_001262259.1| ferredoxin [Sphingomonas wittichii RW1]
gi|148499867|gb|ABQ68121.1| ferredoxin [Sphingomonas wittichii RW1]
Length = 106
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 20/95 (21%)
Query: 76 PDGTPDIHFRTAC---GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG- 131
PDG+ TAC G L + LN+ +D +++C G +C TC V V +G
Sbjct: 9 PDGS-----ETACDVAAGLSLMEAALNNGVD------EIIADCGGALSCATCHVYVDDGW 57
Query: 132 KELLGSRTDKEKEKLK----RKPKNWRLACQTTVG 162
+ G+ ++ E+E L+ R+P N RL+CQ +G
Sbjct: 58 MDRTGAPSEVEEEMLEFAVDRRP-NSRLSCQIKLG 91
>gi|323144177|ref|ZP_08078812.1| NADH:ubiquinone oxidoreductase, F subunit [Succinatimonas hippei
YIT 12066]
gi|322416018|gb|EFY06717.1| NADH:ubiquinone oxidoreductase, F subunit [Succinatimonas hippei
YIT 12066]
Length = 409
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C G G CG C V+V++G G E ++ + WRLACQ TV
Sbjct: 68 SACGGRGACGQCKVKVVKGG---GDVLPIEYSHFTKRQIREGWRLACQVTV 115
>gi|94266736|ref|ZP_01290406.1| Ferredoxin [delta proteobacterium MLMS-1]
gi|93452609|gb|EAT03181.1| Ferredoxin [delta proteobacterium MLMS-1]
Length = 637
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQ 174
C G G CG C V + +G E++ S+ +KE + RLACQ++V + LVV +
Sbjct: 36 CGGDGVCGKCKVAIEQG-EVISSQGQLKKED---QEAGRRLACQSSV----KSDLVV--R 85
Query: 175 LPEWKGHEWKYKK 187
+PE G + K K
Sbjct: 86 IPEATGQDGKALK 98
>gi|301059799|ref|ZP_07200693.1| adenylate and Guanylate cyclase catalytic domain protein [delta
proteobacterium NaphS2]
gi|300446125|gb|EFK09996.1| adenylate and Guanylate cyclase catalytic domain protein [delta
proteobacterium NaphS2]
Length = 291
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK----PKNWRLACQTTVGTPDST 167
++ C G C TC + V+EG L R+ EKE L + P++ RLACQT + +
Sbjct: 22 INACGGDARCTTCRIYVMEG--LRNCRSRNEKEMLVAEKMGFPEDIRLACQTRIKGDITI 79
Query: 168 GLVVIQQL 175
VI +L
Sbjct: 80 KRPVIDEL 87
>gi|254283500|ref|ZP_04958468.1| NADH:ubiquinone oxidoreductase, F subunit [gamma proteobacterium
NOR51-B]
gi|219679703|gb|EED36052.1| NADH:ubiquinone oxidoreductase, F subunit [gamma proteobacterium
NOR51-B]
Length = 407
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQTTV 161
S C GGGTC C V G G+ E+ R+ N WRL+CQT V
Sbjct: 67 SACGGGGTCAQCKCVVNAGG---GAMLPTEESHFTRRDANAGWRLSCQTPV 114
>gi|374853538|dbj|BAL56444.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[uncultured candidate division OP1 bacterium]
gi|374856673|dbj|BAL59526.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[uncultured candidate division OP1 bacterium]
Length = 211
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 20/79 (25%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEG-------KELLGSRTDKE 142
GQ L + + DL+ + C G GTC TC V+ +EG +LG +DK
Sbjct: 50 GQNLMQALKKAGYDLF-------AQCGGKGTCATCRVKALEGLPSDQITPAMLGPLSDKL 102
Query: 143 KEKLKRKPKNWRLACQTTV 161
++ + W L+CQ ++
Sbjct: 103 RK------EGWVLSCQISL 115
>gi|83855383|ref|ZP_00948913.1| phenylacetic acid degradation oxidoreductase PaaK [Sulfitobacter
sp. NAS-14.1]
gi|83843226|gb|EAP82393.1| phenylacetic acid degradation oxidoreductase PaaK [Sulfitobacter
sp. NAS-14.1]
Length = 346
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 83 HFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
H T GQ + D L +N+D P+A G C TCM +V EG+ + S E
Sbjct: 267 HSFTMAKGQSVLDAALENNLD--APFA------CKAGVCSTCMCKVTEGEVEMLSNHALE 318
Query: 143 KEKLKRKPKNWRLACQT 159
+++R +RL+CQ+
Sbjct: 319 DYEVER---GYRLSCQS 332
>gi|421504544|ref|ZP_15951485.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina DLHK]
gi|400344502|gb|EJO92871.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina DLHK]
Length = 407
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKL 146
G KL + ++NI L S C GGGTC C ++E G E+L + +E
Sbjct: 50 AGGKLLQTLADNNIFLS-------SACGGGGTCAQCKC-IVESGGGEMLST---EESHFT 98
Query: 147 KRKPKN-WRLACQTTV 161
KR+ + WRL+CQT V
Sbjct: 99 KREAREGWRLSCQTPV 114
>gi|398813292|ref|ZP_10571991.1| ferredoxin [Brevibacillus sp. BC25]
gi|398038953|gb|EJL32099.1| ferredoxin [Brevibacillus sp. BC25]
Length = 98
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQTTVGTPDSTGLVVIQQLP 176
G C C V+EG E L T +EK +L++ + + +RL CQT + S+G V + P
Sbjct: 41 GVCAQCRTHVVEGAEHLNEVTPEEKLRLRKAERAEGYRLGCQTKI---VSSGTVKVAHRP 97
>gi|297587811|ref|ZP_06946455.1| ferredoxin [Finegoldia magna ATCC 53516]
gi|297574500|gb|EFH93220.1| ferredoxin [Finegoldia magna ATCC 53516]
Length = 525
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
++C G TCG C +++IEG + TD EK LK++ RL+C T+ G V
Sbjct: 35 NSCNGKLTCGKCKIKIIEGN--VNEITDTEKRLLKKEEIENGIRLSCAVTM-----NGDV 87
Query: 171 VIQQLPEWKGHEWKYKKIPTSELPQ 195
+++ L E + + + E+P+
Sbjct: 88 IVETLSENSSIDV----LDSGEMPE 108
>gi|255086377|ref|XP_002509155.1| predicted protein [Micromonas sp. RCC299]
gi|226524433|gb|ACO70413.1| predicted protein [Micromonas sp. RCC299]
Length = 208
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI-EGKELLGSRTDKEKEKLKR 148
GQ+LR +L + A + NC G GTCGTC VE++ G TD E+ +L
Sbjct: 60 GQRLRTALLLGGESPHNGGANAI-NCRGLGTCGTCAVEIVPSGAVTPRDWTDAERIRLNF 118
Query: 149 KPKN------WRLACQTTVG 162
P RL+CQ +G
Sbjct: 119 PPHGPPGNSRLRLSCQVRLG 138
>gi|448712812|ref|ZP_21701841.1| ferredoxin [Halobiforma nitratireducens JCM 10879]
gi|445790238|gb|EMA40907.1| ferredoxin [Halobiforma nitratireducens JCM 10879]
Length = 129
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD +L + + + L NC G TCGTC V V +G + T EK +L
Sbjct: 16 GVLLRDALLEAGLTPHNGTTDRL-NCGGRATCGTCAVRV-DGD--VSDPTAAEKRRLGVP 71
Query: 150 P----KNWRLACQTTV 161
P K RLACQT V
Sbjct: 72 PLRGRKGLRLACQTAV 87
>gi|146306631|ref|YP_001187096.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina ymp]
gi|145574832|gb|ABP84364.1| NADH:ubiquinone oxidoreductase, subunit F [Pseudomonas mendocina
ymp]
Length = 407
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 14/76 (18%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKL 146
G KL + ++NI L S C GGGTC C ++E G E+L + +E
Sbjct: 50 AGGKLLQTLADNNIFLS-------SACGGGGTCAQCKC-IVESGGGEMLST---EESHFT 98
Query: 147 KRKPKN-WRLACQTTV 161
KR+ + WRL+CQT V
Sbjct: 99 KREAREGWRLSCQTPV 114
>gi|149924465|ref|ZP_01912827.1| putative 2Fe-2S cluster assembly ferredoxin [Plesiocystis pacifica
SIR-1]
gi|149814668|gb|EDM74245.1| putative 2Fe-2S cluster assembly ferredoxin [Plesiocystis pacifica
SIR-1]
Length = 113
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 76 PDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELL 135
PDG + +T GQ L +I ++ + S C G C +C ++EG++ L
Sbjct: 10 PDGERTVEAKT---GQNLLEIAEEHDVKMG-------SACGGVCACSSCHCYILEGEDSL 59
Query: 136 GSRTDKEKEKLKR----KPKNWRLACQTTVGTPD 165
+D E+++L KP + RL CQ +G D
Sbjct: 60 DEPSDAEEDRLDMAFDVKPSS-RLGCQVKLGDED 92
>gi|448624490|ref|ZP_21670438.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax denitrificans ATCC 35960]
gi|445749695|gb|EMA01137.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax denitrificans ATCC 35960]
Length = 125
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLS--NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK 147
G LRD +L++ + PYAR NC G G C TC V V G+ D + L
Sbjct: 41 GTVLRDALLDAGL---SPYARLTKRVNCGGRGLCATCGVRVRSGEPT----PDHWHDGLA 93
Query: 148 RKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHE 182
+ RL+CQ V P + LV + W G E
Sbjct: 94 ARFGYPRLSCQVRVDEPMTVELV---EKVVWGGRE 125
>gi|78189834|ref|YP_380172.1| chlorosome envelope protein X [Chlorobium chlorochromatii CaD3]
gi|78172033|gb|ABB29129.1| chlorosome envelope protein X [Chlorobium chlorochromatii CaD3]
Length = 162
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQT 159
C G G C TC + V+EG E L + +EK L +N R+ACQT
Sbjct: 33 CGGNGMCQTCYITVLEGMENLTPLSREEKALLSDTLISENTRMACQT 79
>gi|440224398|ref|YP_007337794.1| adenylate/guanylate cyclase [Rhizobium tropici CIAT 899]
gi|440043270|gb|AGB75248.1| adenylate/guanylate cyclase [Rhizobium tropici CIAT 899]
Length = 565
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ 158
S C G G C TC V++IEG E L E++ L R + RLACQ
Sbjct: 294 SVCGGKGQCSTCRVQIIEGAENLPPPEPLEQKTLNRIGATPDVRLACQ 341
>gi|419953540|ref|ZP_14469684.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri TS44]
gi|387969600|gb|EIK53881.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri TS44]
Length = 407
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + ++NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLASNNIFLS-------SACGGGGTCAQCKCIVQSGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|408369911|ref|ZP_11167691.1| 2Fe-2S ferredoxin [Galbibacter sp. ck-I2-15]
gi|407744965|gb|EKF56532.1| 2Fe-2S ferredoxin [Galbibacter sp. ck-I2-15]
Length = 108
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 104 LYGPYARPLSNCAGGGTCGTCMVEVIEGK--ELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
L+ Y + +C G CGTC ++++EG+ E + S + +N RLACQ +
Sbjct: 34 LFDKYLQQWGDCKGRAWCGTCHIQILEGQIPEEMDSDEKHTLSVIDSATENSRLACQIPL 93
Query: 162 GT 163
+
Sbjct: 94 NS 95
>gi|312197360|ref|YP_004017421.1| hypothetical protein FraEuI1c_3544 [Frankia sp. EuI1c]
gi|311228696|gb|ADP81551.1| hypothetical protein FraEuI1c_3544 [Frankia sp. EuI1c]
Length = 152
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 47 ATISENDSQANAAEEPPVVNF-AFVHSVLLPDGTPDIHFRTACGGQKLRDIMLN 99
A I + + A A P V F AF H++L +GTPD GGQ+LRD + N
Sbjct: 86 ANIDDLTTAAPAVIHPDFVRFDAFEHALLAENGTPDPALSQEAGGQELRDSLQN 139
>gi|15602188|ref|NP_245260.1| Fdx protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|378774040|ref|YP_005176283.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella multocida 36950]
gi|383309959|ref|YP_005362769.1| Ferredoxin [Pasteurella multocida subsp. multocida str. HN06]
gi|386834565|ref|YP_006239881.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella multocida subsp.
multocida str. 3480]
gi|417852900|ref|ZP_12498354.1| Fdx-1 [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|417855300|ref|ZP_12500454.1| Fdx-1 [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|421263049|ref|ZP_15714126.1| Fdx-1 [Pasteurella multocida subsp. multocida str. P52VAC]
gi|425063020|ref|ZP_18466145.1| Ferredoxin, 2Fe-2S [Pasteurella multocida subsp. gallicida X73]
gi|425065098|ref|ZP_18468218.1| Ferredoxin, 2Fe-2S [Pasteurella multocida subsp. gallicida P1059]
gi|12720560|gb|AAK02407.1| Fdx-1 [Pasteurella multocida subsp. multocida str. Pm70]
gi|338215930|gb|EGP02141.1| Fdx-1 [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338216401|gb|EGP02514.1| Fdx-1 [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|356596588|gb|AET15314.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella multocida 36950]
gi|380871231|gb|AFF23598.1| Ferredoxin [Pasteurella multocida subsp. multocida str. HN06]
gi|385201267|gb|AFI46122.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella multocida subsp.
multocida str. 3480]
gi|401690117|gb|EJS85430.1| Fdx-1 [Pasteurella multocida subsp. multocida str. P52VAC]
gi|404383136|gb|EJZ79591.1| Ferredoxin, 2Fe-2S [Pasteurella multocida subsp. gallicida X73]
gi|404384457|gb|EJZ80892.1| Ferredoxin, 2Fe-2S [Pasteurella multocida subsp. gallicida P1059]
Length = 111
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H L P+G + A G+ L D L++ ID+ C C TC V + E
Sbjct: 9 HEELCPEG---LALEVA-EGENLLDAALDAGIDIEHA-------CDKSCACTTCHVIIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L TD E + L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNESTDMEDDMLDKAWGLEVDSRLSCQCLVGKED-----LVVEIPKY 103
>gi|395221511|ref|ZP_10402969.1| ferredoxin [Pontibacter sp. BAB1700]
gi|394453248|gb|EJF08227.1| ferredoxin [Pontibacter sp. BAB1700]
Length = 107
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKE--KEKLKRKPKNWRLACQTTVGTPDSTGLVVI 172
C G C TC VEV++ EL D+ E L RL+CQ V PD GLVV
Sbjct: 44 CGGMAICATCHVEVLQSGELPEPGDDEAYMLETLPHATATSRLSCQLRV-NPDLDGLVV- 101
Query: 173 QQLPE 177
+ +PE
Sbjct: 102 RLMPE 106
>gi|448299547|ref|ZP_21489556.1| ferredoxin [Natronorubrum tibetense GA33]
gi|445587522|gb|ELY41780.1| ferredoxin [Natronorubrum tibetense GA33]
Length = 100
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP-- 150
LRD++L ++ + A L NC G GTCGTC V V E G R E+ +L P
Sbjct: 2 LRDVLLQADESPHNGRADTL-NCRGLGTCGTCAVSVSGEVEEPGPR---ERLRLATPPHV 57
Query: 151 --KNWRLACQTTV 161
RLACQ V
Sbjct: 58 SDSGLRLACQLRV 70
>gi|409398237|ref|ZP_11249058.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
sp. Chol1]
gi|409117370|gb|EKM93804.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
sp. Chol1]
Length = 407
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + ++NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLASNNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|260912954|ref|ZP_05919439.1| ferredoxin [Pasteurella dagmatis ATCC 43325]
gi|260632944|gb|EEX51110.1| ferredoxin [Pasteurella dagmatis ATCC 43325]
Length = 111
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 19/111 (17%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H L P+G G+ L D L++ ID+ C C TC V + E
Sbjct: 9 HEELCPEGLA----LDVAEGENLLDAALDAGIDIEHA-------CDKSCACTTCHVIIRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEW 178
G + L TD E + L + + RL+CQ VG D ++ ++P++
Sbjct: 58 GFDSLNESTDTEDDMLDKAWGLEVDSRLSCQCIVGKED-----LVVEIPKY 103
>gi|222106624|ref|YP_002547415.1| adenylate cyclase [Agrobacterium vitis S4]
gi|221737803|gb|ACM38699.1| adenylate cyclase [Agrobacterium vitis S4]
Length = 571
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQ 158
C G G C TC V+VI+G++LL E+ L R RLACQ
Sbjct: 295 CGGKGQCSTCRVQVIDGEQLLPPAETLEQGTLNRIKAGPGVRLACQ 340
>gi|393760657|ref|ZP_10349464.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 1
[Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393161155|gb|EJC61222.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 1
[Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 102
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 91 QKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-KRK 149
Q+ ++++ + I + P+ C G G C C V++G E L + KEK++L +R
Sbjct: 18 QENTNLVVRAGIKQF-PFPHLTYGC-GMGKCAKCACRVLDGAEHLPAANWKEKKQLGERL 75
Query: 150 PKNWRLACQTTV 161
+ WRLACQ +
Sbjct: 76 DQGWRLACQLWI 87
>gi|153813620|ref|ZP_01966288.1| hypothetical protein RUMOBE_04043 [Ruminococcus obeum ATCC 29174]
gi|149830276|gb|EDM85369.1| 2Fe-2S iron-sulfur cluster binding domain protein [Ruminococcus
obeum ATCC 29174]
Length = 642
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT----DKE 142
A G L ++ +N+ + P C+G G CG C V+ ++G EL +T D+E
Sbjct: 18 ANAGDNLLEVARGANVAIDAP-------CSGNGACGKCRVQ-LKGGELDSKKTLHISDEE 69
Query: 143 KEKLKRKPKNWRLACQTTV 161
E K WRLAC + +
Sbjct: 70 FE------KGWRLACMSKI 82
>gi|427713565|ref|YP_007062189.1| ferredoxin [Synechococcus sp. PCC 6312]
gi|427377694|gb|AFY61646.1| ferredoxin [Synechococcus sp. PCC 6312]
Length = 160
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR----KPKNWRLACQTTVGTPDST 167
L C G G C TC V + +G + L T +E+ L+ KP N RLACQ V P
Sbjct: 34 LKECGGRGMCATCHVFIKDGMDSLSPLTRREQRTLEVITTCKP-NSRLACQARVVGP--- 89
Query: 168 GLVVIQQLP 176
G+VV +LP
Sbjct: 90 GVVV--ELP 96
>gi|337293064|emb|CCB91060.1| Na(+)-translocating NADH-quinone reductase subunit F [Waddlia
chondrophila 2032/99]
Length = 416
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 85 RTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKE 144
++ GG L +++ I + P C G TC C V+++EG + TDK
Sbjct: 40 KSVPGGGTLLQSLMSQGITIPSP-------CGGKATCKQCRVQIVEGVD-PPLETDKSTF 91
Query: 145 KLKRKPKNWRLACQTTV 161
K + WRL+CQ+ +
Sbjct: 92 SRKELKEGWRLSCQSKL 108
>gi|366163216|ref|ZP_09462971.1| ferredoxin [Acetivibrio cellulolyticus CD2]
Length = 88
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
S C G G CG C+V+VI GK + T E++ L +K + +RLAC+TTV D T +
Sbjct: 30 SPCNGKGKCGKCIVKVISGK--VSEPTKCEEDLLGKKNLGQGYRLACETTV--IDDTEIE 85
Query: 171 VIQ 173
+I+
Sbjct: 86 LIK 88
>gi|392965629|ref|ZP_10331048.1| ferredoxin [Fibrisoma limi BUZ 3]
gi|387844693|emb|CCH53094.1| ferredoxin [Fibrisoma limi BUZ 3]
Length = 106
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK---NWRLACQTTV 161
L+ C G C TC V+V+EG + L D E + L P + RL+CQ V
Sbjct: 38 LATCGGMALCATCHVQVLEGLDKLPPAQDAELDMLDTLPDADFDSRLSCQLRV 90
>gi|329955221|ref|ZP_08296178.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides clarus YIT
12056]
gi|328526220|gb|EGF53239.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides clarus YIT
12056]
Length = 438
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K+ +WRL CQ V
Sbjct: 82 SACGGKGSCGQCKCQVVEGGGEILPSEIPHFSR--KQVQDHWRLGCQVKV 129
>gi|167762698|ref|ZP_02434825.1| hypothetical protein BACSTE_01056 [Bacteroides stercoris ATCC
43183]
gi|167699038|gb|EDS15617.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides stercoris
ATCC 43183]
Length = 438
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K+ +WRL CQ V
Sbjct: 82 SACGGKGSCGQCKCQVVEGGGEILPSEIPHFSR--KQVQDHWRLGCQVKV 129
>gi|303288275|ref|XP_003063426.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455258|gb|EEH52562.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 234
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI-EGKELLGSRTDKEKEKLKR 148
G LR +L + + + A + NC G GTCGTC VEV S T E +L+
Sbjct: 88 GATLRTALLRAGLSPHNDAAN-VINCRGLGTCGTCAVEVTPRDAASPSSWTTMEAARLRF 146
Query: 149 KP------KNWRLACQTTV 161
P + RLACQ V
Sbjct: 147 PPHASPGNRRLRLACQVRV 165
>gi|386829194|ref|ZP_10116301.1| ferredoxin [Beggiatoa alba B18LD]
gi|386430078|gb|EIJ43906.1| ferredoxin [Beggiatoa alba B18LD]
Length = 115
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 19/77 (24%)
Query: 108 YARPLSNCAGGGTCGTCMVEV--IEGKELLGS-RTDKEKEKLKRK--------------- 149
Y P+ G G CGTC+++V ++ K + S TDKEK LK+
Sbjct: 34 YKIPIEFNCGDGECGTCVIKVSSLDEKGRMSSFLTDKEKVVLKQVGKLTAEDIEKAEVSD 93
Query: 150 -PKNWRLACQTTVGTPD 165
P WRLACQ V D
Sbjct: 94 IPPQWRLACQFIVRDED 110
>gi|389578494|ref|ZP_10168521.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Desulfobacter postgatei 2ac9]
gi|389400129|gb|EIM62351.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Desulfobacter postgatei 2ac9]
Length = 403
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
S C G G+CG C +V+EG GS E L RK K RL+CQ V
Sbjct: 67 SACGGSGSCGMCRCKVLEGG---GSVLPTEMSHLSRKEKAAGVRLSCQLKV 114
>gi|218130842|ref|ZP_03459646.1| hypothetical protein BACEGG_02437 [Bacteroides eggerthii DSM 20697]
gi|217987186|gb|EEC53517.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides eggerthii
DSM 20697]
Length = 438
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K+ +WRL CQ V
Sbjct: 82 SACGGKGSCGQCKCQVVEGGGEILPSEIPHFSR--KQIQDHWRLGCQVKV 129
>gi|448308952|ref|ZP_21498823.1| ferredoxin [Natronorubrum bangense JCM 10635]
gi|445592338|gb|ELY46526.1| ferredoxin [Natronorubrum bangense JCM 10635]
Length = 114
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD++L ++ + A L NC G GTCGTC V V G R E+ +L
Sbjct: 16 GAVLRDVLLRADESPHNGRADAL-NCRGLGTCGTCAVAVSGEVSEPGPR---ERLRLATP 71
Query: 150 PKN----WRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYKKIPTSE 192
P + RLACQ V +VI++ P + G K E
Sbjct: 72 PHDADSGLRLACQLRVEDD-----LVIEKYPGFWGQHTGRKHEDAEE 113
>gi|443472674|ref|ZP_21062700.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
pseudoalcaligenes KF707]
gi|442903116|gb|ELS28529.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
pseudoalcaligenes KF707]
Length = 408
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEK 143
T G KL + NI L S C GGGTC C V+E G E+L + +E
Sbjct: 48 TVPAGGKLLQTLAAQNIFLS-------SACGGGGTCAQCKC-VVESGGGEMLPT---EES 96
Query: 144 EKLKRKPK-NWRLACQTTV 161
+R+ K WRL+CQT V
Sbjct: 97 HFTRRQAKEGWRLSCQTPV 115
>gi|297620460|ref|YP_003708597.1| Na(+)-translocating NADH-quinone reductase subunit F [Waddlia
chondrophila WSU 86-1044]
gi|297375761|gb|ADI37591.1| Na(+)-translocating NADH-quinone reductase subunit F [Waddlia
chondrophila WSU 86-1044]
Length = 430
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 85 RTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKE 144
++ GG L +++ I + P C G TC C V+++EG + TDK
Sbjct: 54 KSVPGGGTLLQSLMSQGITIPSP-------CGGKATCKQCRVQIVEGVD-PPLETDKSTF 105
Query: 145 KLKRKPKNWRLACQTTV 161
K + WRL+CQ+ +
Sbjct: 106 SRKELKEGWRLSCQSKL 122
>gi|408370609|ref|ZP_11168384.1| Na(+)-translocating NADH-quinone reductase subunit F [Galbibacter
sp. ck-I2-15]
gi|407743846|gb|EKF55418.1| Na(+)-translocating NADH-quinone reductase subunit F [Galbibacter
sp. ck-I2-15]
Length = 430
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 40/105 (38%), Gaps = 17/105 (16%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFR-----TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGG 118
V+ F S LLP G + G L + NS I L S C GG
Sbjct: 21 VLALLFAKSKLLPSGPVTVKINGEKDLEVSSGGTLLSTLGNSKIFL-------PSACGGG 73
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
GTC C V EG G E+ RK + WRL+CQ +
Sbjct: 74 GTCIQCKCIVTEGG---GQILPTEEPHFTRKEIAEGWRLSCQVKI 115
>gi|397687620|ref|YP_006524939.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 10701]
gi|395809176|gb|AFN78581.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 10701]
Length = 407
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + ++NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLASNNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|317476038|ref|ZP_07935290.1| ubiquinone oxidoreductase [Bacteroides eggerthii 1_2_48FAA]
gi|316907676|gb|EFV29378.1| ubiquinone oxidoreductase [Bacteroides eggerthii 1_2_48FAA]
Length = 424
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V+E G E+L S K+ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVVEGGGEILPSEIPHFSR--KQIQDHWRLGCQVKV 115
>gi|407698510|ref|YP_006823297.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
gi|407247657|gb|AFT76842.1| oxidoreductase FAD/NAD(P)-binding domain-containing protein
[Alteromonas macleodii str. 'Black Sea 11']
Length = 612
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELL-GSRTDKEKEKLKRKPKNWRLACQTTVG 162
S C G GTCG C V + +L R K++LK +RLACQ VG
Sbjct: 274 SQCGGSGTCGRCRVVIKPTDPVLTADRYQLSKDQLK---AGYRLACQRVVG 321
>gi|387130654|ref|YP_006293544.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylophaga
sp. JAM7]
gi|386271943|gb|AFJ02857.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylophaga
sp. JAM7]
Length = 405
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 84 FRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEK 143
RT GG KL + N+N+ + S C GGGTC C V ++EG GS E+
Sbjct: 44 IRTPAGG-KLLGALANANLFVS-------SACGGGGTCAQCRVRIMEGG---GSILPTEE 92
Query: 144 EKL-KRKPKNW-RLACQTTV 161
+ KR+ + RL+CQ +V
Sbjct: 93 SHITKREAADGDRLSCQVSV 112
>gi|373856091|ref|ZP_09598836.1| ferredoxin [Bacillus sp. 1NLA3E]
gi|372453928|gb|EHP27394.1| ferredoxin [Bacillus sp. 1NLA3E]
Length = 119
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 111 PLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR-KPKNWRLACQT 159
PL GTCG C V+++ G LL EK KL+ + +RLACQT
Sbjct: 67 PLDYKCQKGTCGRCKVKIVNGSALLQPANHLEKTKLQHLLQQEFRLACQT 116
>gi|357037466|ref|ZP_09099266.1| ferredoxin [Desulfotomaculum gibsoniae DSM 7213]
gi|355361631|gb|EHG09386.1| ferredoxin [Desulfotomaculum gibsoniae DSM 7213]
Length = 545
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-KRKPKNWRLACQTTV 161
C G GTCG C+V + +L EKE+L +WRLACQ V
Sbjct: 40 CNGRGTCGKCLV---QASGMLSQPQTDEKERLGSMLSDSWRLACQAKV 84
>gi|431926806|ref|YP_007239840.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas stutzeri RCH2]
gi|431825093|gb|AGA86210.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas stutzeri RCH2]
Length = 407
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + ++NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLASNNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|392394806|ref|YP_006431408.1| metal-binding protein [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525884|gb|AFM01615.1| putative metal-binding protein [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 616
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
C G G CG C V+VIEG E + DK++ + + RLAC T +
Sbjct: 38 CGGRGKCGKCRVKVIEGLEDF-TAIDKDRLTSQELDEGIRLACITKI 83
>gi|418294241|ref|ZP_12906137.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379065620|gb|EHY78363.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 407
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + ++NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLASNNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|298530040|ref|ZP_07017442.1| ferredoxin [Desulfonatronospira thiodismutans ASO3-1]
gi|298509414|gb|EFI33318.1| ferredoxin [Desulfonatronospira thiodismutans ASO3-1]
Length = 572
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LRDI+L + + P C G GTCG+C V + E +++ T E
Sbjct: 18 GETLRDILLRRGVYVESP-------CNGNGTCGSCGVWIQEHQQV--PYTPNENITESDL 68
Query: 150 PKNWRLACQTT 160
K +RL+CQ
Sbjct: 69 EKGYRLSCQVV 79
>gi|452747553|ref|ZP_21947348.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri NF13]
gi|452008669|gb|EME00907.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri NF13]
Length = 407
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + ++NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLASNNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|374702980|ref|ZP_09709850.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
sp. S9]
Length = 407
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKP--KNWRLACQTTV 161
S C GGGTC C ++ G G E+ R+ + WRL+CQ V
Sbjct: 67 SACGGGGTCAQCKCVIVSGG---GEMLSTEESHFTRREAKEGWRLSCQAAV 114
>gi|409730974|ref|ZP_11272526.1| ferredoxin I 5 [Halococcus hamelinensis 100A6]
gi|448724242|ref|ZP_21706750.1| ferredoxin I 5 [Halococcus hamelinensis 100A6]
gi|445785912|gb|EMA36693.1| ferredoxin I 5 [Halococcus hamelinensis 100A6]
Length = 113
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE 133
G LRD +L +YG + +NC G G C TC VEV G E
Sbjct: 23 GDNLRDALLEHGFPVYGTIST-HANCGGRGLCATCTVEVDPGPE 65
>gi|20467242|gb|AAM22473.1|AF502245_1 unknown [Moorella thermoacetica]
Length = 637
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 22/101 (21%)
Query: 63 PVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPL-SNCAGGGTC 121
PV FA LPD +I R A G IM +N PL S C G GTC
Sbjct: 2 PVDQFAVT---FLPD---NITVRVAAG----TSIMEAAN-----QAGLPLKSTCGGAGTC 46
Query: 122 GTCMVEVIEGK-ELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
G C ++V EGK E+ G + + + + LAC+T V
Sbjct: 47 GRCAIKVQEGKVEVRGGHLPA-----RLREEGYSLACRTMV 82
>gi|226943582|ref|YP_002798655.1| Na(+)-translocating NADH-quinone reductase subunit F [Azotobacter
vinelandii DJ]
gi|226718509|gb|ACO77680.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating protein,
subunit F [Azotobacter vinelandii DJ]
Length = 407
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEK 143
T G KL + +NI L S C GGGTC C V+E G E+L + +E
Sbjct: 47 TVPAGGKLLQTLAANNIFLS-------SACGGGGTCAQCKC-VVESGGGEMLPT---EES 95
Query: 144 EKLKRKPKN-WRLACQTTV 161
+R+ K WRL+CQT V
Sbjct: 96 HFTRRQAKEGWRLSCQTPV 114
>gi|416930595|ref|ZP_11933462.1| ferredoxin [Burkholderia sp. TJI49]
gi|325525811|gb|EGD03537.1| ferredoxin [Burkholderia sp. TJI49]
Length = 103
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 112 LSNCAGGGTCGTCMVEVIEG-KELLGSRTDKEKEKLKRKPK---NWRLACQTTVGTPDST 167
++ C G +C TC V V E ++G D E++ L N RL+CQ + TP+
Sbjct: 37 VAECGGACSCATCEVHVDEAWMRIVGEACDIERDMLSANGDVLPNCRLSCQIEI-TPELD 95
Query: 168 GLVV 171
GLVV
Sbjct: 96 GLVV 99
>gi|83590048|ref|YP_430057.1| ferredoxin [Moorella thermoacetica ATCC 39073]
gi|83572962|gb|ABC19514.1| Ferredoxin [Moorella thermoacetica ATCC 39073]
Length = 635
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 19/90 (21%)
Query: 74 LLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPL-SNCAGGGTCGTCMVEVIEGK 132
LPD +I R A G IM +N PL S C G GTCG C ++V EGK
Sbjct: 8 FLPD---NITVRVAAG----TSIMEAAN-----QAGLPLKSTCGGAGTCGRCAIKVQEGK 55
Query: 133 -ELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
E+ G + + + + LACQT V
Sbjct: 56 VEVRGGHLPA-----RLREEGYSLACQTMV 80
>gi|410099661|ref|ZP_11294630.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Parabacteroides goldsteinii CL02T12C30]
gi|409218028|gb|EKN11001.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Parabacteroides goldsteinii CL02T12C30]
Length = 429
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 11/97 (11%)
Query: 69 FVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNI--DLYGPYARPLSNCAGGGTCGTCMV 126
F + L+P G + R G+K D+ + + L S C G G+CG C
Sbjct: 31 FAKAKLIPSG----NVRMVVNGEKEYDVPIGGTVLNTLQSEGIFLSSACGGSGSCGQCRC 86
Query: 127 EVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
+V EG G+ E RK +WRL CQT +
Sbjct: 87 QVPEGG---GNILPTEVGFFSRKQIKDHWRLGCQTKI 120
>gi|300711292|ref|YP_003737106.1| ferredoxin [Halalkalicoccus jeotgali B3]
gi|448296605|ref|ZP_21486660.1| ferredoxin [Halalkalicoccus jeotgali B3]
gi|299124975|gb|ADJ15314.1| ferredoxin [Halalkalicoccus jeotgali B3]
gi|445581110|gb|ELY35473.1| ferredoxin [Halalkalicoccus jeotgali B3]
Length = 106
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G +LR+ +L + + + A +NC G CGTC V V + ++ E+++L +
Sbjct: 16 GTELREALLEAGLSPHNG-ASNYANCGGWAVCGTCAVAV---DGAVSEMSEAERKRLSKW 71
Query: 150 PKN----WRLACQTTV 161
P + RLACQT +
Sbjct: 72 PHDLDSGLRLACQTHI 87
>gi|42525157|ref|NP_970537.1| hypothetical protein Bd3833 [Bdellovibrio bacteriovorus HD100]
gi|39577368|emb|CAE81191.1| fdx [Bdellovibrio bacteriovorus HD100]
Length = 109
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 111 PLSN-CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQ 158
PL++ C G TCGTC V V++G E L R + E+E + + RLACQ
Sbjct: 43 PLNHTCGGNATCGTCRVLVVKGLEKLPPRNELEQEMAEDRGFQPFERLACQ 93
>gi|89897937|ref|YP_515047.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
felis Fe/C-56]
gi|123735929|sp|Q255Y6.1|NQRF_CHLFF RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|89331309|dbj|BAE80902.1| Na (+)-translocating NADH-quinone reductase subunit F
[Chlamydophila felis Fe/C-56]
Length = 431
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G TC C V++++G + TD+ ++ + WRL+CQT V
Sbjct: 74 SPCGGKATCKQCKVKIVKGAD-QPLETDRATFSKRQLEQGWRLSCQTKV 121
>gi|392426085|ref|YP_006467079.1| putative metal-binding protein [Desulfosporosinus acidiphilus SJ4]
gi|391356048|gb|AFM41747.1| putative metal-binding protein [Desulfosporosinus acidiphilus SJ4]
Length = 616
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 11/63 (17%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQT------TVGTPDS 166
C G GTCG C V++ +G +G+ KE+E + K RLAC T TV PD
Sbjct: 38 CGGRGTCGKCRVKISKG---VGTPVAKEQELIPSKELDAGVRLACMTAVYNDLTVELPDQ 94
Query: 167 TGL 169
T L
Sbjct: 95 TKL 97
>gi|338732292|ref|YP_004670765.1| putative Na(+)-translocating NADH-quinone reductase subunit F
[Simkania negevensis Z]
gi|336481675|emb|CCB88274.1| putative Na(+)-translocating NADH-quinone reductase subunit F
[Simkania negevensis Z]
Length = 425
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 10/74 (13%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLK 147
GG+ L + I L P C G TC C V+V+E G ++L TD+ K
Sbjct: 52 GGRTLLVTLAEQGIALPSP-------CGGKATCKQCKVQVLEGGGDIL--ETDRSSFSPK 102
Query: 148 RKPKNWRLACQTTV 161
+ + WRL+CQ V
Sbjct: 103 QLKEGWRLSCQCKV 116
>gi|335420649|ref|ZP_08551686.1| Na(+)-translocating NADH-quinone reductase subunit F [Salinisphaera
shabanensis E1L3A]
gi|334894385|gb|EGM32581.1| Na(+)-translocating NADH-quinone reductase subunit F [Salinisphaera
shabanensis E1L3A]
Length = 409
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C GGGTC C V+V+EG + + K + + + RL+CQ TV
Sbjct: 69 SACGGGGTCAQCRVKVLEGGGAILPTEESHINKREAREGD-RLSCQVTV 116
>gi|428165376|gb|EKX34372.1| hypothetical protein GUITHDRAFT_55409, partial [Guillardia theta
CCMP2712]
Length = 153
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR +L +++ + A+ + NC G GTCGTC V I+G+ T E+ +L
Sbjct: 41 GELLRSSLLRASLSPHNSLAQTI-NCRGLGTCGTCAVS-IQGRVSPAEWTAMERARLNFP 98
Query: 150 PKN------WRLACQTTV 161
P + RLACQ V
Sbjct: 99 PYSNDNNSLLRLACQVRV 116
>gi|254466689|ref|ZP_05080100.1| adenylate/guanylate cyclase [Rhodobacterales bacterium Y4I]
gi|206687597|gb|EDZ48079.1| adenylate/guanylate cyclase [Rhodobacterales bacterium Y4I]
Length = 559
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ 158
S C G G C TC V V EG + L E L R P N RLACQ
Sbjct: 287 SLCGGKGRCTTCRVVVEEGGDTLPPPAPPEARSLARVKAPANMRLACQ 334
>gi|428215699|ref|YP_007088843.1| ferredoxin [Oscillatoria acuminata PCC 6304]
gi|428004080|gb|AFY84923.1| ferredoxin [Oscillatoria acuminata PCC 6304]
Length = 160
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 95 DIMLNSNI--DLYGPYARPLSNCAGGGTCGTCMVEVIEGKEL---LGSRTDKEKEKLKRK 149
++ N+NI L L C G G C TC V + +G E +G R + E +
Sbjct: 15 EVQTNANILSALLAEDLHVLKECGGRGLCATCHVFIKQGMESVSPMGRREQRTLEVITTA 74
Query: 150 PKNWRLACQTTV 161
N RLACQ+ +
Sbjct: 75 KLNSRLACQSRI 86
>gi|120038|sp|P21149.1|FER_TRIVA RecName: Full=Ferredoxin; Flags: Precursor
gi|162510|gb|AAA30324.1| ferredoxin precursor [Trichomonas vaginalis]
Length = 100
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
C G CG C+ + + GK + D EKE L+ +P N RLAC T+
Sbjct: 46 CQGNKACGKCICKHVSGKV---AAEDDEKEFLEDQPANARLACAITL 89
>gi|449131937|ref|ZP_21768111.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula europaea 6C]
gi|448888746|gb|EMB19048.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula europaea 6C]
Length = 419
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTVGT 163
S C GGGTC C V+V E G +LL + + K + RL+CQ V T
Sbjct: 78 SACGGGGTCAQCKVKVAEGGGDLLATEAGHINK--KEAAEGERLSCQVAVKT 127
>gi|86605243|ref|YP_474006.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86553785|gb|ABC98743.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 161
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKPKNWRLACQTTV 161
C G G C TC V V EG E L T +E E + N RLACQ V
Sbjct: 36 ECNGRGLCATCHVHVKEGMEALTPITPREAKTLETITSARSNSRLACQARV 86
>gi|386021368|ref|YP_005939392.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 4166]
gi|327481340|gb|AEA84650.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 4166]
Length = 407
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + +NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLAANNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRK--PKNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAAEGWRLSCQTPV 114
>gi|67922112|ref|ZP_00515627.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|67856012|gb|EAM51256.1| Ferredoxin [Crocosphaera watsonii WH 8501]
Length = 160
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 95 DIMLNSNIDLYGPYARPLS---NCAGGGTCGTCMVEVIEGKELLG---SRTDKEKEKLKR 148
DI+ N N+ L G A+ L+ C G G C TC V + +G E L R + E +
Sbjct: 15 DILTNDNL-LSGLLAKDLNVWKECGGRGMCSTCHVFITDGMESLSPVNRREIRTMEVITT 73
Query: 149 KPKNWRLACQTTV 161
K RLACQ V
Sbjct: 74 AGKCSRLACQARV 86
>gi|357405582|ref|YP_004917506.1| Na(+)-translocating NADH-quinone reductase subunit F
[Methylomicrobium alcaliphilum 20Z]
gi|351718247|emb|CCE23914.1| Na(+)-translocating NADH-quinone reductase subunit F
[Methylomicrobium alcaliphilum 20Z]
Length = 406
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 95 DIMLNSNIDLYGPYARPL------------SNCAGGGTCGTCMVEVIEGKELLGSRTDKE 142
+I++N ++ P L S C GGG+C C V++ EG G E
Sbjct: 36 EILINDEKTIHAPVGSKLLTALADNKLFVPSACGGGGSCAQCRVKIFEGG---GEILPTE 92
Query: 143 KEKLKRKPKN--WRLACQTTV 161
+ + ++ N RL+CQ TV
Sbjct: 93 RSHITKREANEGERLSCQVTV 113
>gi|407786533|ref|ZP_11133678.1| ferredoxin [Celeribacter baekdonensis B30]
gi|407201254|gb|EKE71255.1| ferredoxin [Celeribacter baekdonensis B30]
Length = 106
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 117 GGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
GGG CGTC +V+EG E KE++ L + +R+ACQT V
Sbjct: 40 GGGFCGTCRCKVVEGLEHTDDVKAKERKHLTDEDVANGFRMACQTFV 86
>gi|169823930|ref|YP_001691541.1| hypothetical protein FMG_0233 [Finegoldia magna ATCC 29328]
gi|167830735|dbj|BAG07651.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 525
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTVGTPDSTGLV 170
++C G TCG C ++++EG + TD EK LK++ RL+C T+ G V
Sbjct: 35 NSCNGKLTCGKCKIKIVEGN--VNEITDTEKRLLKKEEIENGIRLSCAVTM-----CGDV 87
Query: 171 VIQQLPEWKGHEWKYKKIPTSELPQ 195
+++ L E + + + E+P+
Sbjct: 88 IVETLSENSSIDV----LDSGEMPE 108
>gi|398336318|ref|ZP_10521023.1| adenylate/guanylate cyclase [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 536
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 18/100 (18%)
Query: 64 VVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGT 123
+VNF + LP+ + Q L +I L+++I P+ C G C T
Sbjct: 3 LVNFENEKEISLPENSAP---------QSLLEISLSNSI----PHTHA---CGGNARCST 46
Query: 124 CMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C V V+E L KEK+ ++K P+ RLACQ V
Sbjct: 47 CRVLVLENPSNLSEPEQKEKDLSQKKGFPEAVRLACQAKV 86
>gi|119478451|ref|ZP_01618436.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2143]
gi|119448537|gb|EAW29784.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2143]
Length = 406
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 89 GGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-- 146
G KL + N+ L S C GGGTC C + EG GS E+
Sbjct: 50 AGDKLLQTLAAQNVFL-------ASACGGGGTCAQCKCIISEGG---GSMLPTEEPHFTP 99
Query: 147 KRKPKNWRLACQTTV 161
+ WRL+CQT+V
Sbjct: 100 RDARDGWRLSCQTSV 114
>gi|448470126|ref|ZP_21600398.1| ferredoxin [Halorubrum kocurii JCM 14978]
gi|445808442|gb|EMA58511.1| ferredoxin [Halorubrum kocurii JCM 14978]
Length = 116
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G+ LR+ +L + + Y R L NC G G C TC V I G+ + + ++L +
Sbjct: 27 GRNLREALLEAGLSPYAAATRRL-NCGGRGLCATCGVR-IRGE----APPEHWHDRLAER 80
Query: 150 PKNWRLACQTTVGTPDSTGLV 170
RL+CQ TV P + LV
Sbjct: 81 FGYPRLSCQVTVDGPMTVELV 101
>gi|325280270|ref|YP_004252812.1| NADH:ubiquinone oxidoreductase, subunit F [Odoribacter splanchnicus
DSM 20712]
gi|324312079|gb|ADY32632.1| NADH:ubiquinone oxidoreductase, subunit F [Odoribacter splanchnicus
DSM 20712]
Length = 422
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
S C G G+CG C +V G GS E K++ +NWRLACQ V
Sbjct: 74 SACGGKGSCGMCKCQVDSGA---GSILPTETGFFSYKQQHENWRLACQVKV 121
>gi|126658992|ref|ZP_01730134.1| putative ferredoxin [Cyanothece sp. CCY0110]
gi|126619790|gb|EAZ90517.1| putative ferredoxin [Cyanothece sp. CCY0110]
Length = 160
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 95 DIMLNSNIDLYGPYARPLS---NCAGGGTCGTCMVEVIEGKELLG---SRTDKEKEKLKR 148
DI N N+ L G A+ L+ C G G C TC V + EG E L R + E +
Sbjct: 15 DIQTNDNL-LSGLLAKDLNVWKECGGRGMCSTCHVFITEGMEGLSPVNRREIRTMEVITT 73
Query: 149 KPKNWRLACQTTV 161
K RLACQ V
Sbjct: 74 ANKCSRLACQARV 86
>gi|282892090|ref|ZP_06300565.1| hypothetical protein pah_c207o014 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174445|ref|YP_004651255.1| Na(+)-translocating NADH-quinone reductase subunit F [Parachlamydia
acanthamoebae UV-7]
gi|281497985|gb|EFB40329.1| hypothetical protein pah_c207o014 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478803|emb|CCB85401.1| putative Na(+)-translocating NADH-quinone reductase subunit F
[Parachlamydia acanthamoebae UV-7]
Length = 446
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 12/79 (15%)
Query: 85 RTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE--LLGSRTDKE 142
+ GG L + ++ I + P C G TC C V ++EG + L R
Sbjct: 66 KQVLGGSTLLQALSSNGIPVPSP-------CGGKATCKQCRVRIVEGADEPLETDRGTFN 118
Query: 143 KEKLKRKPKNWRLACQTTV 161
K++LK + WRL+CQ V
Sbjct: 119 KKELK---EGWRLSCQAKV 134
>gi|428221352|ref|YP_007105522.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
gi|427994692|gb|AFY73387.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
Length = 348
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK---PKNWRLACQTTVG 162
C G C TC + + EG E R E E L +K P++ RLACQT V
Sbjct: 40 CGGRARCSTCRILITEGLEYCAPRNPLE-ETLAQKLGFPQDIRLACQTKVA 89
>gi|30250317|ref|NP_842387.1| Na(+)-translocating NADH-quinone reductase subunit F [Nitrosomonas
europaea ATCC 19718]
gi|30181112|emb|CAD86304.1| nqrF; Na(+)-translocating NADH-ubiquinone reductase subunit F
[Nitrosomonas europaea ATCC 19718]
Length = 406
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G GTCG C V+V E G ++L + T + R +RL+CQ +V
Sbjct: 66 SPCGGSGTCGQCRVKVFEGGGDILPTETSHINKHDAR--AGYRLSCQVSV 113
>gi|301335317|ref|ZP_07223561.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2tet1]
gi|301336303|ref|ZP_07224505.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
muridarum MopnTet14]
Length = 431
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
VH L D +T G+ L +L+S I + P C G +C C V +
Sbjct: 38 VHPCKLRINNDDSLTKTVDSGKTLLSSLLDSGIAIPSP-------CGGKASCKQCKVRIT 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R+ K++L++ WRL+CQT V
Sbjct: 91 KNADEPLETDRSTFSKQQLEQ---GWRLSCQTKV 121
>gi|392384065|ref|YP_005033261.1| ferredoxin [Azospirillum brasilense Sp245]
gi|356880780|emb|CCD01744.1| ferredoxin [Azospirillum brasilense Sp245]
Length = 566
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ 158
C G G C TC + V EG + L E+ L+R P+ RLACQ
Sbjct: 290 CGGRGRCSTCRIRVTEGVDALPPPNATERAVLERMKAPRAVRLACQ 335
>gi|448604598|ref|ZP_21657765.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sulfurifontis ATCC BAA-897]
gi|445744007|gb|ELZ95487.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sulfurifontis ATCC BAA-897]
Length = 125
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 9/83 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLS--NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK 147
G LRD +L++ + PYAR NC G G C TC V V G+ D + L
Sbjct: 41 GTVLRDALLDAGL---SPYARLTKRVNCGGRGLCATCGVRVRSGEPT----PDHWHDDLA 93
Query: 148 RKPKNWRLACQTTVGTPDSTGLV 170
+ RL+CQ V P + LV
Sbjct: 94 ARFGYPRLSCQLRVDGPMTVELV 116
>gi|76802531|ref|YP_327539.1| ferredoxin I 5 [Natronomonas pharaonis DSM 2160]
gi|76558396|emb|CAI49987.2| ferredoxin (2Fe-2S) [Natronomonas pharaonis DSM 2160]
Length = 113
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEV 128
G LRD++L +YG + + NC G G C TC VEV
Sbjct: 23 GSVLRDVLLERGFSVYGTVSSRV-NCGGRGLCATCTVEV 60
>gi|443321387|ref|ZP_21050441.1| ferredoxin [Gloeocapsa sp. PCC 73106]
gi|442788896|gb|ELR98575.1| ferredoxin [Gloeocapsa sp. PCC 73106]
Length = 160
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 94 RDIMLNSNIDLYGPYAR----PLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
++ ++N+N DL + L C G C TC V + EG+E L +EK L+
Sbjct: 12 QETVVNTNEDLLSILLKNDLKVLQECGARGMCSTCHVYIKEGEESLSPLNRREKRSLEVI 71
Query: 150 P---KNWRLACQTTV 161
N RLACQ V
Sbjct: 72 TTCRTNSRLACQARV 86
>gi|344199779|ref|YP_004784105.1| ferredoxin [Acidithiobacillus ferrivorans SS3]
gi|343775223|gb|AEM47779.1| ferredoxin [Acidithiobacillus ferrivorans SS3]
Length = 114
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 17/72 (23%)
Query: 111 PLSNCAGGGTCGTCMVEVI-EGKELLGSRTDKEKEKLK-------------RKP---KNW 153
PL G G C C V+V+ +GK+ S T EKE L +KP W
Sbjct: 37 PLPVSCGKGACRVCTVKVVPQGKQQQLSLTAFEKETLHALGKLPAVLAGEGKKPWIGPYW 96
Query: 154 RLACQTTVGTPD 165
RLACQ VGT D
Sbjct: 97 RLACQCIVGTGD 108
>gi|53803519|ref|YP_114800.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylococcus
capsulatus str. Bath]
gi|81681351|sp|Q605A0.1|NQRF_METCA RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|53757280|gb|AAU91571.1| Na(+)-translocating NADH-quinone reductase, F subunit
[Methylococcus capsulatus str. Bath]
Length = 407
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C GGGTC C V+V+E G E+L T+ + + RL+CQ TV
Sbjct: 66 SACGGGGTCAQCRVQVLEGGGEIL--PTELSHITKREAAQGDRLSCQVTV 113
>gi|300865020|ref|ZP_07109847.1| Ferredoxin [Oscillatoria sp. PCC 6506]
gi|300336957|emb|CBN54997.1| Ferredoxin [Oscillatoria sp. PCC 6506]
Length = 160
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 96 IMLNSNI--DLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKP 150
++ NSNI L L C G G C TC V + EG + L + +E+ E +
Sbjct: 16 VLTNSNILSALLSKELNVLKECGGRGMCATCHVYIKEGMDALSGMSRREQRTLEVITTAK 75
Query: 151 KNWRLACQTTV 161
RLACQ +
Sbjct: 76 TTSRLACQAQI 86
>gi|209526318|ref|ZP_03274847.1| ferredoxin [Arthrospira maxima CS-328]
gi|376001484|ref|ZP_09779352.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|423062693|ref|ZP_17051483.1| ferredoxin [Arthrospira platensis C1]
gi|209493247|gb|EDZ93573.1| ferredoxin [Arthrospira maxima CS-328]
gi|375330093|emb|CCE15105.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|406715649|gb|EKD10802.1| ferredoxin [Arthrospira platensis C1]
Length = 161
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 95 DIMLNSNI--DLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLG---SRTDKEKEKLKRK 149
++ NSNI L L C G G C TC V + +G E L R + E +
Sbjct: 15 EVKTNSNILSALLSKELHVLKECGGRGMCATCHVYIKDGMESLSPVNRREQRTLEVITTA 74
Query: 150 PKNWRLACQTTV 161
K RLACQ V
Sbjct: 75 QKTSRLACQAHV 86
>gi|166154082|ref|YP_001654200.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis 434/Bu]
gi|166154957|ref|YP_001653212.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|301335287|ref|ZP_07223531.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2tet1]
gi|339625489|ref|YP_004716968.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating subunit F
[Chlamydia trachomatis L2c]
gi|165930070|emb|CAP03553.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis 434/Bu]
gi|165930945|emb|CAP06507.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|339461115|gb|AEJ77618.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydia trachomatis L2c]
gi|440526555|emb|CCP52039.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/8200/07]
gi|440536379|emb|CCP61892.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/795]
gi|440537273|emb|CCP62787.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L1/440/LN]
gi|440538162|emb|CCP63676.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L1/1322/p2]
gi|440539052|emb|CCP64566.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L1/115]
gi|440539941|emb|CCP65455.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L1/224]
gi|440540832|emb|CCP66346.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2/25667R]
gi|440541720|emb|CCP67234.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L3/404/LN]
gi|440542608|emb|CCP68122.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/UCH-2]
gi|440543499|emb|CCP69013.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/Canada2]
gi|440544390|emb|CCP69904.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/LST]
gi|440545280|emb|CCP70794.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/Ams1]
gi|440546170|emb|CCP71684.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/CV204]
gi|440914432|emb|CCP90849.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/Ams2]
gi|440915322|emb|CCP91739.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/Ams3]
gi|440916214|emb|CCP92631.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/Canada1]
gi|440917107|emb|CCP93524.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/Ams4]
gi|440917998|emb|CCP94415.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis L2b/Ams5]
Length = 431
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
VH L D +T G+ L +L+S I + P C G C C V +
Sbjct: 38 VHPCKLKINNDDSLTKTVDSGKTLLSSLLDSGIAIPSP-------CGGKAACKQCKVRIT 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R+ K++L++ WRL+CQT V
Sbjct: 91 KNADEPLETDRSTFSKQQLEQ---GWRLSCQTKV 121
>gi|76789481|ref|YP_328567.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A/HAR-13]
gi|237803170|ref|YP_002888364.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis B/Jali20/OT]
gi|237805091|ref|YP_002889245.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis B/TZ1A828/OT]
gi|255311572|ref|ZP_05354142.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis 6276]
gi|255317873|ref|ZP_05359119.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis 6276s]
gi|376282750|ref|YP_005156576.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A2497]
gi|385240282|ref|YP_005808124.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/9768]
gi|385241208|ref|YP_005809049.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/11222]
gi|385243059|ref|YP_005810898.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/9301]
gi|385246667|ref|YP_005815489.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/11074]
gi|385270471|ref|YP_005813631.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A2497]
gi|123606623|sp|Q3KKV3.1|NQRF_CHLTA RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|76168011|gb|AAX51019.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A/HAR-13]
gi|231273391|emb|CAX10306.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231274404|emb|CAX11199.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis B/Jali20/OT]
gi|296436287|gb|ADH18461.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/9768]
gi|296437216|gb|ADH19386.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/11222]
gi|296438146|gb|ADH20307.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/11074]
gi|297140647|gb|ADH97405.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/9301]
gi|347975611|gb|AEP35632.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A2497]
gi|371908780|emb|CAX09412.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A2497]
gi|438690678|emb|CCP49935.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A/7249]
gi|438691763|emb|CCP49037.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A/5291]
gi|438693136|emb|CCP48138.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis A/363]
gi|440533703|emb|CCP59213.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534597|emb|CCP60107.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis Ia/SotonIa3]
Length = 431
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
VH L D +T G+ L +L+S I + P C G C C V +
Sbjct: 38 VHPCKLKINNDDSLTKTVDSGKTLLSSLLDSGIAIPSP-------CGGKAACKQCKVRIT 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R+ K++L++ WRL+CQT V
Sbjct: 91 KNADEPLETDRSTFSKQQLEQ---GWRLSCQTKV 121
>gi|222082773|ref|YP_002542138.1| adenylate cyclase [Agrobacterium radiobacter K84]
gi|221727452|gb|ACM30541.1| adenylate cyclase protein [Agrobacterium radiobacter K84]
Length = 574
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ 158
S C G G C TC V++IEG + L E++ L R + RLACQ
Sbjct: 303 SVCGGKGQCSTCRVQIIEGADNLPPPEGLEQKTLNRIGATPDVRLACQ 350
>gi|333371612|ref|ZP_08463557.1| ferredoxin [Desmospora sp. 8437]
gi|332975830|gb|EGK12708.1| ferredoxin [Desmospora sp. 8437]
Length = 107
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL--KRKPKNWRLACQTTV 161
NC G CG C V V+EG E L D+E +L ++ K +RL+CQT +
Sbjct: 45 NCTSG-RCGRCRVRVLEGAENLSELGDREVLRLGEEQVEKGFRLSCQTYI 93
>gi|392421851|ref|YP_006458455.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri CCUG 29243]
gi|390984039|gb|AFM34032.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri CCUG 29243]
Length = 407
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + +NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLAANNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|421616791|ref|ZP_16057793.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
gi|421617279|ref|ZP_16058273.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
gi|409780777|gb|EKN60394.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
gi|409781272|gb|EKN60874.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
Length = 407
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + +NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLAANNIFLS-------SACGGGGTCAQCKCIVERGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|255349136|ref|ZP_05381143.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis 70]
gi|255503673|ref|ZP_05382063.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis 70s]
gi|255507352|ref|ZP_05382991.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D(s)2923]
gi|385242134|ref|YP_005809974.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/11023]
gi|385245744|ref|YP_005814567.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/150]
gi|386263096|ref|YP_005816375.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis Sweden2]
gi|389858435|ref|YP_006360677.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis F/SW4]
gi|389859311|ref|YP_006361552.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/SW3]
gi|389860187|ref|YP_006362427.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis F/SW5]
gi|289525784|emb|CBJ15265.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis Sweden2]
gi|296435360|gb|ADH17538.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/150]
gi|296439077|gb|ADH21230.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/11023]
gi|380249507|emb|CCE14803.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis F/SW5]
gi|380250382|emb|CCE13914.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis F/SW4]
gi|380251260|emb|CCE13025.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/SW3]
gi|440527452|emb|CCP52936.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D/SotonD1]
gi|440530125|emb|CCP55609.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/SotonE4]
gi|440531025|emb|CCP56509.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/SotonE8]
gi|440531916|emb|CCP57426.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis F/SotonF3]
gi|440535492|emb|CCP61002.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis E/Bour]
Length = 431
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
VH L D +T G+ L +L+S I + P C G C C V +
Sbjct: 38 VHPCKLKINNDDSLTKTVDSGKTLLSSLLDSGIAIPSP-------CGGKAACKQCKVRIT 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R+ K++L++ WRL+CQT V
Sbjct: 91 KNADEPLETDRSTFSKQQLEQ---GWRLSCQTKV 121
>gi|193212319|ref|YP_001998272.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
gi|193085796|gb|ACF11072.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
Length = 224
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C G C +C V V+EG + L + EK + K + RLAC+TT+
Sbjct: 33 CGGNAICQSCFVYVLEGADCLSQPGEDEKAFISDKLFAEGGRLACRTTI 81
>gi|146282989|ref|YP_001173142.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri A1501]
gi|339494708|ref|YP_004715001.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|145571194|gb|ABP80300.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas stutzeri A1501]
gi|338802080|gb|AEJ05912.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 407
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 33/78 (42%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEK 145
T G KL + +NI L S C GGGTC C V G G E+
Sbjct: 47 TVPAGGKLLQTLAANNIFLS-------SACGGGGTCAQCKCIVESGG---GEMLPTEESH 96
Query: 146 LKRKP--KNWRLACQTTV 161
R+ + WRL+CQT V
Sbjct: 97 FTRREAGEGWRLSCQTPV 114
>gi|15605473|ref|NP_220259.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D/UW-3/CX]
gi|385243948|ref|YP_005811794.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D-EC]
gi|385244828|ref|YP_005812672.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D-LC]
gi|15214144|sp|O84745.1|NQRF_CHLTR RecName: Full=Probable Na(+)-translocating NADH-quinone reductase
subunit F; Short=Na(+)-NQR subunit F;
Short=Na(+)-translocating NQR subunit F; AltName:
Full=NQR complex subunit F; AltName: Full=NQR-1 subunit
F
gi|3329199|gb|AAC68335.1| Phenolhydrolase/NADH ubiquinone oxidoreductase [Chlamydia
trachomatis D/UW-3/CX]
gi|297748871|gb|ADI51417.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D-EC]
gi|297749751|gb|ADI52429.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D-LC]
gi|440525668|emb|CCP50919.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis K/SotonK1]
gi|440528344|emb|CCP53828.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D/SotonD5]
gi|440529235|emb|CCP54719.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis D/SotonD6]
gi|440532809|emb|CCP58319.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydia
trachomatis G/SotonG1]
Length = 431
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 70 VHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVI 129
VH L D +T G+ L +L+S I + P C G C C V +
Sbjct: 38 VHPCKLKINNDDSLTKTVDSGKTLLSSLLDSGIAIPSP-------CGGKAACKQCKVRIT 90
Query: 130 EGKE--LLGSRTDKEKEKLKRKPKNWRLACQTTV 161
+ + L R+ K++L++ WRL+CQT V
Sbjct: 91 KNADEPLETDRSTFSKQQLEQ---GWRLSCQTKV 121
>gi|434391415|ref|YP_007126362.1| ferredoxin [Gloeocapsa sp. PCC 7428]
gi|428263256|gb|AFZ29202.1| ferredoxin [Gloeocapsa sp. PCC 7428]
Length = 160
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 99 NSNIDLYGPYARPLS---NCAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKPKN 152
N N+ LYG L+ C+G G C TC V + G E L +EK E + N
Sbjct: 19 NDNL-LYGVLTNELNILPECSGRGMCSTCHVYIKSGMESLSPLNRREKRTLEAIATAQPN 77
Query: 153 WRLACQTTV 161
RLACQ V
Sbjct: 78 SRLACQARV 86
>gi|398377876|ref|ZP_10536046.1| family 3 adenylate cyclase [Rhizobium sp. AP16]
gi|397726038|gb|EJK86480.1| family 3 adenylate cyclase [Rhizobium sp. AP16]
Length = 574
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQ 158
S C G G C TC V++IEG + L E++ L R + RLACQ
Sbjct: 303 SVCGGKGQCSTCRVQIIEGADNLPPPEGLEQKTLNRIGATPDVRLACQ 350
>gi|448734440|ref|ZP_21716666.1| ferredoxin I 5 [Halococcus salifodinae DSM 8989]
gi|445800488|gb|EMA50843.1| ferredoxin I 5 [Halococcus salifodinae DSM 8989]
Length = 112
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 28/92 (30%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD +L +YG ++ +NC G G C TC VE+ E
Sbjct: 22 GDTLRDALLEHGFPVYGTLSQ-YANCGGRGLCATCTVEIDPAPE---------------- 64
Query: 150 PKNW-----------RLACQTTVGTPDSTGLV 170
P +W RL+C V P + GL+
Sbjct: 65 PTHWHDAAAVRFGYPRLSCCIEVEEPLTVGLL 96
>gi|406899717|gb|EKD42913.1| hypothetical protein ACD_72C00534G0002 [uncultured bacterium]
Length = 92
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL 146
A G+ LR+ +N+ L P+ G CGTC+V + G E L +T++EKE L
Sbjct: 15 ATDGELLRETCQKNNLTL--PFG------CENGLCGTCLVAIKAGAENLTEKTNQEKETL 66
Query: 147 K--RKPKNWRLACQTTV 161
+ RLACQ +
Sbjct: 67 DVLLAYDDQRLACQCKI 83
>gi|392397955|ref|YP_006434556.1| ferredoxin [Flexibacter litoralis DSM 6794]
gi|390529033|gb|AFM04763.1| ferredoxin [Flexibacter litoralis DSM 6794]
Length = 113
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 112 LSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKE--KLKRKPKNWRLACQTTV 161
L +C G G C TC + + EG E L + EK L+R +N RLACQ ++
Sbjct: 34 LHSCGGKGKCTTCKMIIKEGSENLTPKGSVEKNFFALERLKENERLACQCSL 85
>gi|260892252|ref|YP_003238349.1| ferredoxin [Ammonifex degensii KC4]
gi|260864393|gb|ACX51499.1| ferredoxin [Ammonifex degensii KC4]
Length = 622
Score = 36.2 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQ 158
C G G CG C V+V EGK + + L+ + + W LACQ
Sbjct: 36 CGGEGVCGRCRVQVQEGKV---TSPPNPRLSLQERQEGWVLACQ 76
>gi|260430726|ref|ZP_05784698.1| NADH:ubiquinone oxidoreductase, F subunit [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418167|gb|EEX11425.1| NADH:ubiquinone oxidoreductase, F subunit [Silicibacter
lacuscaerulensis ITI-1157]
Length = 406
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C GGGTC C V V+EG GS E+ + ++ + RL+CQ V
Sbjct: 66 SACGGGGTCAQCRVRVLEGG---GSILPTEESHITKREAARGDRLSCQVAV 113
>gi|32471618|ref|NP_864611.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SH 1]
gi|440714707|ref|ZP_20895283.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SWK14]
gi|32443459|emb|CAD72292.1| Na+-translocating NADH:quinone oxidoreductase, subunit nqrF
[Rhodopirellula baltica SH 1]
gi|436440400|gb|ELP33727.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SWK14]
Length = 419
Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTVGT 163
S C GGGTC C V+V E G +LL + + K + RL+CQ V T
Sbjct: 78 SACGGGGTCAQCKVKVSEGGGDLLATEAGHINK--KEAAEGERLSCQVAVKT 127
>gi|348618461|ref|ZP_08884986.1| (2Fe-2S) ferredoxin [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816261|emb|CCD29733.1| (2Fe-2S) ferredoxin [Candidatus Glomeribacter gigasporarum BEG34]
Length = 114
Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 71 HSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE 130
H L P GT A GQ + +L + I++ C C TC V V E
Sbjct: 9 HEDLCPQGT----TVRAKPGQSICSALLENGIEIE-------HACEQSCACTTCHVVVRE 57
Query: 131 GKELLGSRTDKEKEKLKRK---PKNWRLACQTTVGTPDSTGLVVIQQLPEWKGHEWKYK 186
G + L + E++ L R RL+CQ V PD L V+ ++P++ ++ K K
Sbjct: 58 GFDALSEADEIEEDLLDRAWGLEATSRLSCQAIV--PDDERLKVVIEIPKYSINQVKEK 114
>gi|291280285|ref|YP_003497120.1| Na(+)-translocating NADH-quinone reductase subunit F [Deferribacter
desulfuricans SSM1]
gi|290754987|dbj|BAI81364.1| Na(+)-translocating NADH-quinone reductase subunit F [Deferribacter
desulfuricans SSM1]
Length = 407
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 13/55 (23%)
Query: 113 SNCAGGGTCGTCMVEVIEG------KELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G GTCG C V+V+EG EL S K +EK + RL+CQ TV
Sbjct: 67 SACGGQGTCGLCKVKVLEGGGDILPTEL--SHISKREEK-----EGVRLSCQVTV 114
>gi|254480666|ref|ZP_05093913.1| NADH:ubiquinone oxidoreductase, F subunit [marine gamma
proteobacterium HTCC2148]
gi|214039249|gb|EEB79909.1| NADH:ubiquinone oxidoreductase, F subunit [marine gamma
proteobacterium HTCC2148]
Length = 407
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
S C GGGTC C + +G GS E+ ++ + WRL+CQT V
Sbjct: 67 SACGGGGTCAQCKCIINDGG---GSMLPTEEGHFTKRDAAEGWRLSCQTAV 114
>gi|426405673|ref|YP_007024644.1| hypothetical protein Bdt_3704 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425862341|gb|AFY03377.1| hypothetical protein Bdt_3704 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 84
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKN--WRLACQ 158
C G TCGTC V V++G E L R + E+E + + RLACQ
Sbjct: 23 CGGNATCGTCRVFVVKGLEKLPERNELEQEMAEDRGFQPFERLACQ 68
>gi|417305369|ref|ZP_12092339.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica WH47]
gi|421613225|ref|ZP_16054313.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SH28]
gi|327538323|gb|EGF24997.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica WH47]
gi|408495992|gb|EKK00563.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SH28]
Length = 413
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTVGT 163
S C GGGTC C V+V E G +LL + + K + RL+CQ V T
Sbjct: 72 SACGGGGTCAQCKVKVSEGGGDLLATEAGHINK--KEAAEGERLSCQVAVKT 121
>gi|411116426|ref|ZP_11388913.1| ferredoxin [Oscillatoriales cyanobacterium JSC-12]
gi|410712529|gb|EKQ70030.1| ferredoxin [Oscillatoriales cyanobacterium JSC-12]
Length = 161
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 12/73 (16%)
Query: 93 LRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR---- 148
L +++N ++D+ L C G G C TC V V +G L +E+ L+
Sbjct: 22 LLSVLINKDLDV-------LKECGGRGMCATCHVYVRDGMAALSPINRREQRTLEVITTC 74
Query: 149 KPKNWRLACQTTV 161
KP N RLACQ V
Sbjct: 75 KP-NSRLACQARV 86
>gi|163761519|ref|ZP_02168591.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
gi|162281233|gb|EDQ31532.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
Length = 616
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQ 158
S C G G C TC V++IE + E L+ R P+N RLACQ
Sbjct: 317 SVCGGRGRCSTCRVQIIETAVPTTPPLEAESRVLERIRAPENVRLACQ 364
>gi|291614708|ref|YP_003524865.1| ferredoxin, 2Fe-2S type, ISC system [Sideroxydans lithotrophicus
ES-1]
gi|291584820|gb|ADE12478.1| ferredoxin, 2Fe-2S type, ISC system [Sideroxydans lithotrophicus
ES-1]
Length = 114
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G + D +L +I++ C C TC V V EG + L T++E++ L +
Sbjct: 24 GISICDALLEHDIEIEHA-------CEKSCACTTCHVIVREGFDSLEEATEQEEDLLDKA 76
Query: 150 ---PKNWRLACQTTVGTPD 165
N RL+CQT VG D
Sbjct: 77 WGLESNSRLSCQTIVGKQD 95
>gi|333901086|ref|YP_004474959.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
fulva 12-X]
gi|333116351|gb|AEF22865.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
fulva 12-X]
Length = 407
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 86 TACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIE--GKELLGSRTDKEK 143
T G KL + ++I L S C GGGTC C ++E G E+L +
Sbjct: 47 TVPAGGKLLQTLAENDIFLS-------SACGGGGTCAQCKC-IVESGGGEMLSTEESHFN 98
Query: 144 EKLKRKPKNWRLACQTTV 161
++ R + WRL+CQT V
Sbjct: 99 KREAR--EGWRLSCQTPV 114
>gi|307104830|gb|EFN53082.1| hypothetical protein CHLNCDRAFT_15141 [Chlorella variabilis]
Length = 106
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LR +L + + + A L NC G GTCGTC VEV G+ T +E+ +L
Sbjct: 10 GSTLRTALLEAGVTPHNGRA-TLINCRGLGTCGTCAVEV-RGQVEPPQWTTQEQLRLNFP 67
Query: 150 P------KNWRLACQT 159
P + RLACQ
Sbjct: 68 PHAPPGNQQLRLACQV 83
>gi|78186512|ref|YP_374555.1| chlorosome envelope protein X [Chlorobium luteolum DSM 273]
gi|78166414|gb|ABB23512.1| chlorosome envelope protein X [Chlorobium luteolum DSM 273]
Length = 198
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQTTVGTPDS 166
C G C TC V+V+EG ELL + EK L + R+AC T+ P +
Sbjct: 33 CGGNAICQTCYVKVLEGAELLSPPGEPEKAMLSELLLAEGNRMACLATIEKPGT 86
>gi|300312167|ref|YP_003776259.1| ferredoxin [2Fe-2S]-type protein [Herbaspirillum seropedicae SmR1]
gi|300074952|gb|ADJ64351.1| ferredoxin [2Fe-2S]-type protein [Herbaspirillum seropedicae SmR1]
Length = 101
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR---KPKNWRLACQTTVGTPDST 167
C G CG C + V+EG++ + T E KL RLACQ VG D T
Sbjct: 36 CQGKAECGACHIFVLEGRKSVSRTTPSENAKLDSIVGVGSKSRLACQVIVGEEDVT 91
>gi|295110169|emb|CBL24122.1| Uncharacterized metal-binding protein [Ruminococcus obeum A2-162]
Length = 642
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 18/79 (22%)
Query: 87 ACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT----DKE 142
A G L ++ +N+ + P C+G G CG C V++ G EL +T D+E
Sbjct: 18 ANAGDNLLEVARGANVAIDAP-------CSGNGACGKCRVQLKSG-ELDSKKTLHISDEE 69
Query: 143 KEKLKRKPKNWRLACQTTV 161
E K WRLAC + +
Sbjct: 70 FE------KGWRLACMSKI 82
>gi|121997078|ref|YP_001001865.1| ferredoxin [Halorhodospira halophila SL1]
gi|121588483|gb|ABM61063.1| ferredoxin [Halorhodospira halophila SL1]
Length = 94
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQTTV 161
G CGTC+ +V+EG+E L ++ E++ L+ K R+ACQ +
Sbjct: 41 GDCGTCLCQVVEGQENLSPPSELEQKLLREHFAGKQQRIACQAQI 85
>gi|332981665|ref|YP_004463106.1| ferredoxin [Mahella australiensis 50-1 BON]
gi|332699343|gb|AEE96284.1| ferredoxin [Mahella australiensis 50-1 BON]
Length = 605
Score = 35.8 bits (81), Expect = 8.3, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQTTVGTPDSTGLV 170
S C G CG C VEV++G + LG T E + L + + LAC V +V
Sbjct: 36 SACGGRQFCGKCKVEVLKGDKTLGYYTAGEMDSLSYLERQMGYHLACAIAVSEDMEIAIV 95
Query: 171 VIQQ 174
+++
Sbjct: 96 NMEE 99
>gi|300855252|ref|YP_003780236.1| hypothetical protein CLJU_c20720 [Clostridium ljungdahlii DSM
13528]
gi|300435367|gb|ADK15134.1| conserved hypothetical protein with a metal binding domain
[Clostridium ljungdahlii DSM 13528]
Length = 617
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 80 PDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRT 139
P+ + C G L++ + +D P C G GTCG C +++++ K L T
Sbjct: 10 PENRIISVCEGTTLKEAITAEGLDFDFP-------CGGMGTCGKCRIKILD-KNL--KAT 59
Query: 140 DKEKEKLKRKP--KNWRLACQTTV 161
+KE + L+ K + LAC+T V
Sbjct: 60 EKELKFLEEKELKEGIHLACETKV 83
>gi|158338970|ref|YP_001520147.1| Fe-S cluster-binding ferredoxin [Acaryochloris marina MBIC11017]
gi|158309211|gb|ABW30828.1| Fe-S cluster-binding protein, possible ferredoxin [Acaryochloris
marina MBIC11017]
Length = 157
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLK---RKPKNWRLACQTTV 161
C G G C TC + + G+E L ++ +E + L+ KN RLACQ V
Sbjct: 37 CGGRGRCATCHIFIQSGEESLSPKSKREVQTLELISNSQKNSRLACQARV 86
>gi|339010833|ref|ZP_08643402.1| putative ferredoxin [Brevibacillus laterosporus LMG 15441]
gi|421873072|ref|ZP_16304688.1| 2Fe-2S iron-sulfur cluster binding domain protein [Brevibacillus
laterosporus GI-9]
gi|338772167|gb|EGP31701.1| putative ferredoxin [Brevibacillus laterosporus LMG 15441]
gi|372458018|emb|CCF14237.1| 2Fe-2S iron-sulfur cluster binding domain protein [Brevibacillus
laterosporus GI-9]
Length = 99
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 119 GTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPK--NWRLACQTTV 161
G C C +V+EG E L T +EK +LK+ + ++RL CQ V
Sbjct: 42 GICAQCRTKVLEGAEFLNEVTKEEKLRLKKAERQDHYRLGCQIQV 86
>gi|46447167|ref|YP_008532.1| Na(+)-translocating NADH-quinone reductase subunit F [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400808|emb|CAF24257.1| probable Na(+)-translocating NADH-quinone reductase, chain F
[Candidatus Protochlamydia amoebophila UWE25]
Length = 465
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
C G TC C V+++EG + +TD + K+ WRL+CQ+ +
Sbjct: 108 CGGKATCKQCRVQILEGAS-VPLQTDMDTFSKKQLNDGWRLSCQSKL 153
>gi|365880952|ref|ZP_09420290.1| conserved membrane hypothetical protein [Bradyrhizobium sp. ORS
375]
gi|365290914|emb|CCD92821.1| conserved membrane hypothetical protein [Bradyrhizobium sp. ORS
375]
Length = 570
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 67 FAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARP-LSNCAGGGTCGTCM 125
F H LL P + T GG KL+ + + +++ A P LS C G CG C
Sbjct: 246 IVFRHIALL--AAPKVAV-TFTGGAKLQAAVGPTLLEIMRVNALPDLSECGGRARCGRCR 302
Query: 126 VEVIEGKELLGSRTDKEKEKLK--RKPKNWRLACQ 158
V +++G L E+ L + ++ RLACQ
Sbjct: 303 VRIVDGAATLPPPGQAERIVLASLKAAEDVRLACQ 337
>gi|189466193|ref|ZP_03014978.1| hypothetical protein BACINT_02563 [Bacteroides intestinalis DSM
17393]
gi|189434457|gb|EDV03442.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides intestinalis
DSM 17393]
Length = 424
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 113 SNCAGGGTCGTCMVEVIE-GKELLGSRTDKEKEKLKRKPKNWRLACQTTV 161
S C G G+CG C +V++ G E+L S K+ +WRL CQ V
Sbjct: 68 SACGGKGSCGQCKCQVLDGGGEILPSEVPHFSR--KQVQDHWRLGCQVKV 115
>gi|15836416|ref|NP_300940.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
pneumoniae J138]
gi|8979257|dbj|BAA99091.1| phenolhydrolase/NADH ubiquinone oxidoreductase 6 [Chlamydophila
pneumoniae J138]
Length = 431
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 85 RTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE--LLGSRTDKE 142
+T GQ L +L+S I + P C G TC C V V++ + L R+
Sbjct: 53 KTVESGQTLLVSLLSSGIPIPSP-------CGGKATCKQCKVRVVKNADEPLETDRSTFS 105
Query: 143 KEKLKRKPKNWRLACQTTV 161
K +L+ + WRL+CQ V
Sbjct: 106 KRQLE---EGWRLSCQCKV 121
>gi|90021447|ref|YP_527274.1| Na(+)-translocating NADH-quinone reductase subunit F
[Saccharophagus degradans 2-40]
gi|89951047|gb|ABD81062.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Saccharophagus degradans 2-40]
Length = 407
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 12/74 (16%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G KL + ++N+ L S C GGGTC C V EG GS E+ ++
Sbjct: 51 GGKLLQTLASNNLFL-------ASACGGGGTCAQCKCVVEEGG---GSILPTEESHFTKR 100
Query: 150 P--KNWRLACQTTV 161
+ WRL+CQ V
Sbjct: 101 EAGEGWRLSCQVPV 114
>gi|407783731|ref|ZP_11130926.1| adenylate/guanylate cyclase [Oceanibaculum indicum P24]
gi|407200166|gb|EKE70177.1| adenylate/guanylate cyclase [Oceanibaculum indicum P24]
Length = 573
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 113 SNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR--KPKNWRLACQT 159
S C G G C TC V + G+E L +E L+R P RLACQ
Sbjct: 297 SVCGGRGRCSTCRVRIDAGEECLPPPAPEEARVLRRIAAPPKVRLACQA 345
>gi|399521390|ref|ZP_10762130.1| NqrF [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110628|emb|CCH38690.1| NqrF [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 407
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 113 SNCAGGGTCGTCMVEVIE--GKELLGSRTDKEKEKLKRKPK-NWRLACQTTV 161
S C GGGTC C ++E G E+L + +E KR+ + WRL+CQT V
Sbjct: 67 SACGGGGTCAQCKC-IVESGGGEMLST---EESHFTKREAREGWRLSCQTPV 114
>gi|86608062|ref|YP_476824.1| (Fe-S)-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556604|gb|ABD01561.1| iron-sulfur cluster-binding protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 176
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEK---EKLKRKPKNWRLACQTTVGTPDSTGLV 170
C G G C TC V V EG E L T +E E + N RLACQ V S G+V
Sbjct: 51 ECNGRGLCATCHVYVKEGMESLTPITPREAKTLETITSARSNSRLACQARVV---SDGVV 107
Query: 171 VIQQLP 176
V +LP
Sbjct: 108 V--ELP 111
>gi|385204394|ref|ZP_10031264.1| ferredoxin [Burkholderia sp. Ch1-1]
gi|385184285|gb|EIF33559.1| ferredoxin [Burkholderia sp. Ch1-1]
Length = 92
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 117 GGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
GGG CGTC +V +G+E + KEK L + +R+ACQT V
Sbjct: 38 GGGLCGTCKCKVEQGRENTDAVKAKEKRHLSAEELEAGYRMACQTFV 84
>gi|384449950|ref|YP_005662552.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydophila pneumoniae LPCoLN]
gi|269302669|gb|ACZ32769.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Chlamydophila pneumoniae LPCoLN]
Length = 431
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 85 RTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE--LLGSRTDKE 142
+T GQ L +L+S I + P C G TC C V V++ + L R+
Sbjct: 53 KTVESGQTLLVSLLSSGIPIPSP-------CGGKATCKQCKVRVVKNADEPLETDRSTFS 105
Query: 143 KEKLKRKPKNWRLACQTTV 161
K +L+ + WRL+CQ V
Sbjct: 106 KRQLE---EGWRLSCQCKV 121
>gi|399912462|ref|ZP_10780776.1| ferredoxin [Halomonas sp. KM-1]
Length = 113
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 95 DIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKL-KRKPKNW 153
++++ + I + PY LS G G C CM +V++G E L KEK+ L +R + +
Sbjct: 22 NLVVRAGIRQF-PYPH-LSYGCGMGKCAKCMCKVLKGGEALPEPNWKEKKMLGERLEQGY 79
Query: 154 RLACQTTV 161
RLACQ V
Sbjct: 80 RLACQLWV 87
>gi|384173270|ref|YP_005554647.1| oxidoreductase [Arcobacter sp. L]
gi|345472880|dbj|BAK74330.1| oxidoreductase [Arcobacter sp. L]
Length = 352
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
GQ L D L + Y PYA G CGTC VEV+EG+ LG + + +R+
Sbjct: 19 GQTLLDAALRQGV--YLPYA------CNHGLCGTCKVEVLEGEVDLGDASYFALMESERE 70
Query: 150 PKNWRLACQTTV 161
+ LAC TV
Sbjct: 71 -DGYCLACTATV 81
>gi|189346298|ref|YP_001942827.1| ferredoxin [Chlorobium limicola DSM 245]
gi|189340445|gb|ACD89848.1| ferredoxin [Chlorobium limicola DSM 245]
Length = 226
Score = 35.8 bits (81), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 115 CAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK--PKNWRLACQTTV 161
C G G C +C V V EG L +++EK + K + RLACQT +
Sbjct: 33 CGGNGICQSCFVYVKEGAGSLSRPSEEEKAFISEKLFQEGGRLACQTVI 81
>gi|15618792|ref|NP_225078.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
pneumoniae CWL029]
gi|16752153|ref|NP_445520.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
pneumoniae AR39]
gi|33242243|ref|NP_877184.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
pneumoniae TW-183]
gi|15214181|sp|Q9Z723.1|NQRF_CHLPN RecName: Full=Probable Na(+)-translocating NADH-quinone reductase
subunit F; Short=Na(+)-NQR subunit F;
Short=Na(+)-translocating NQR subunit F; AltName:
Full=NQR complex subunit F; AltName: Full=NQR-1 subunit
F
gi|4377202|gb|AAD19021.1| Phenolhydrolase/NADH ubiquinone oxidoreductase 6 [Chlamydophila
pneumoniae CWL029]
gi|7189896|gb|AAF38762.1| NADH:ubiquinone oxidoreductase, beta subunit, putative
[Chlamydophila pneumoniae AR39]
gi|33236754|gb|AAP98841.1| Na+-translocating NADH-ubiquinone oxidoreductase beta chain
[Chlamydophila pneumoniae TW-183]
Length = 431
Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 12/79 (15%)
Query: 85 RTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKE--LLGSRTDKE 142
+T GQ L +L+S I + P C G TC C V V++ + L R+
Sbjct: 53 KTVESGQTLLVSLLSSGIPIPSP-------CGGKATCKQCKVRVVKNADEPLETDRSTFS 105
Query: 143 KEKLKRKPKNWRLACQTTV 161
K +L+ + WRL+CQ V
Sbjct: 106 KRQLE---EGWRLSCQCKV 121
>gi|448729309|ref|ZP_21711626.1| ferredoxin I 5 [Halococcus saccharolyticus DSM 5350]
gi|445795256|gb|EMA45785.1| ferredoxin I 5 [Halococcus saccharolyticus DSM 5350]
Length = 122
Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 28/92 (30%)
Query: 90 GQKLRDIMLNSNIDLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRK 149
G LRD L + +YG ++ +NC G G C TC VEV E
Sbjct: 32 GDTLRDASLEHELPVYGTLSQ-YANCGGRGLCSTCTVEVDPAPE---------------- 74
Query: 150 PKNW-----------RLACQTTVGTPDSTGLV 170
P +W RL+C V P + GL+
Sbjct: 75 PTHWHDAAAVRFGYPRLSCCIEVEEPLTVGLL 106
>gi|342217946|ref|ZP_08710581.1| 2Fe-2S iron-sulfur cluster binding domain protein [Megasphaera sp.
UPII 135-E]
gi|341592585|gb|EGS35470.1| 2Fe-2S iron-sulfur cluster binding domain protein [Megasphaera sp.
UPII 135-E]
Length = 731
Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 114 NCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKRKPKNWRLACQTTVGT 163
+C G G CG C + V++G ++ + DK+ WR+ACQ+ T
Sbjct: 239 DCGGMGKCGKCKIRVLQG-DIPITTADKQVFTETELQAGWRMACQSVTKT 287
>gi|443477782|ref|ZP_21067603.1| ferredoxin [Pseudanabaena biceps PCC 7429]
gi|443017042|gb|ELS31577.1| ferredoxin [Pseudanabaena biceps PCC 7429]
Length = 164
Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 92 KLRDIMLNSNI--DLYGPYARPLSNCAGGGTCGTCMVEVIEGKELLGSRTDKEKEKLKR- 148
++ DI N + L G L C G G C TC V + +G L +EK L+
Sbjct: 12 QIADIATNGALLSGLMGEELSILKECGGRGMCATCHVYIQDGMSSLSPMGKREKRTLEVI 71
Query: 149 ---KPKNWRLACQTTV 161
KP N RLACQ V
Sbjct: 72 TTCKP-NSRLACQAKV 86
>gi|172037023|ref|YP_001803524.1| ferredoxin [Cyanothece sp. ATCC 51142]
gi|354555792|ref|ZP_08975091.1| ferredoxin [Cyanothece sp. ATCC 51472]
gi|171698477|gb|ACB51458.1| probable ferredoxin [Cyanothece sp. ATCC 51142]
gi|353552116|gb|EHC21513.1| ferredoxin [Cyanothece sp. ATCC 51472]
Length = 160
Score = 35.8 bits (81), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 95 DIMLNSNIDLYGPYARPLS---NCAGGGTCGTCMVEVIEGKELLG---SRTDKEKEKLKR 148
DI N N+ L G A+ L+ C G G C TC V + EG + L R + E +
Sbjct: 15 DIQTNDNL-LSGLLAKDLNVWKECGGRGMCSTCHVFITEGMDSLSPVNRREIRTMEVITT 73
Query: 149 KPKNWRLACQTTV 161
K RLACQ V
Sbjct: 74 ANKCSRLACQARV 86
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,253,997,026
Number of Sequences: 23463169
Number of extensions: 131983336
Number of successful extensions: 283539
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 883
Number of HSP's that attempted gapping in prelim test: 282850
Number of HSP's gapped (non-prelim): 1133
length of query: 195
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 60
effective length of database: 9,191,667,552
effective search space: 551500053120
effective search space used: 551500053120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)