BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029336
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUN5|TET2_ARATH Tetraspanin-2 OS=Arabidopsis thaliana GN=TET2 PE=2 SV=1
Length = 270
Score = 229 bits (584), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 160/204 (78%), Gaps = 9/204 (4%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
M ++NN+TA+LN +ALLCSIPI ASGIWLASKPDNEC++L RWPVV+LGVL+L+VS GF
Sbjct: 1 MALANNLTAILNLLALLCSIPITASGIWLASKPDNECVNLLRWPVVVLGVLILVVSATGF 60
Query: 61 IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
IGAY YKETLLA YLC MAILI LLLVVL+FAFVVTRPDGSY VPGR YKEYRL+ FS+W
Sbjct: 61 IGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVTRPDGSYRVPGRGYKEYRLEGFSNW 120
Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFF-SAHISPLQG---TRTASCG-- 174
L+++VVDSKNW ++RACLADT+ C KL+Q+++TADQFF S+ I+PLQ +CG
Sbjct: 121 LKENVVDSKNWGRLRACLADTNVCPKLNQEFITADQFFSSSKITPLQSGCCKPPTACGYN 180
Query: 175 ---ATTRVNSATIAALAKLVCWET 195
T +N +AA A W
Sbjct: 181 FVNPTLWLNPTNMAADADCYLWSN 204
>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1
Length = 273
Score = 147 bits (372), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 104/165 (63%), Gaps = 2/165 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SNN+ +LNF+ L SIPI+A GIWL+ K EC PV+ LGV +++V++ G IG+
Sbjct: 5 SNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGS 64
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
LL YL VM +LI+L+ + VFAFVVT + G+ YKEY+L +S+WL+
Sbjct: 65 CCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQK 124
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVT--ADQFFSAHISPLQ 166
V + KNWNKIR+CL ++ CSKL ++V + F+ H++ LQ
Sbjct: 125 RVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQ 169
>sp|Q9FIQ5|TRN2_ARATH Protein TORNADO 2 OS=Arabidopsis thaliana GN=TRN2 PE=1 SV=1
Length = 269
Score = 143 bits (361), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 106/166 (63%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
M +SNN+ +NFI +L SIP+I +GIWLA N C+ L +WPV++LGVL+LLV L GF
Sbjct: 1 MPLSNNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGVLILLVGLAGF 60
Query: 61 IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
IG +W LL YL M ILIVLL ++ F ++VT + P RAY EY L FS W
Sbjct: 61 IGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFSGW 120
Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQ 166
LR V S W +IR CL+ T C +L+Q+Y A FF+AH+ P+Q
Sbjct: 121 LRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDFFNAHLDPIQ 166
>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1
Length = 285
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPVVLLGVLVLLVSLCG 59
M SN++ ++NF+ L SIPI+ GIWL+S+ ++ +C+ +WP++++G+ +++VSL G
Sbjct: 1 MRTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAG 60
Query: 60 FIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSS 119
F GA + + L+ YL VM ++I L+ ++FA+ VT V R Y +Y L+ +S
Sbjct: 61 FAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSGRTVLNRGYLDYYLEDYSG 120
Query: 120 WLRDHVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQ 166
WL+D V D W KI +CL D+ C K+ + + TAD FF +SP++
Sbjct: 121 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVE 171
>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1
Length = 263
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 95/165 (57%), Gaps = 2/165 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SNN+ +LNF L SIPI+++GIWL EC P+V+LG+ ++ VS+ G +GA
Sbjct: 5 SNNLLGILNFFTFLLSIPILSAGIWLGKNAATECERFLDKPMVVLGIFLMFVSIAGLVGA 64
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
LL YL M +LI+L +FAF VT + R YKEY + +S+WL+
Sbjct: 65 CCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVTNRGAGEVISDRGYKEYHVADYSNWLQK 124
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQY--VTADQFFSAHISPLQ 166
V ++KNW +IR+CL +D CS +Y + + F+ ++++ LQ
Sbjct: 125 RVNNAKNWERIRSCLMYSDVCSTYRTRYASINVEDFYKSNLNALQ 169
>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1
Length = 282
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 2/154 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SN + VLN + LL SIPII + ++ A + C + + P++++G ++L+VSL GFIGA
Sbjct: 5 SNTVIGVLNLLTLLASIPIIGTALYKA-RSSTTCENFLQTPLLVIGFIILIVSLAGFIGA 63
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
+ L YL VM LI L+ + +F VVT G VPGR YKEYRL + WLR+
Sbjct: 64 CFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRE 123
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQF 157
V D + WN IR+C+ + TC+K+ + + T D F
Sbjct: 124 RVRDPEYWNSIRSCILSSKTCTKI-ESWTTLDYF 156
>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1
Length = 272
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
SN++ +LNF L S+PI+++GIWL+ K +C P++ LGV ++++++ G +G+
Sbjct: 5 SNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGS 64
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
LL YL VM LI+++L +FAFVVT + G+AYKEYRL+ +S WL+
Sbjct: 65 CCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQR 124
Query: 124 HVVDSKNWNKIRACLADTDTCSKLSQQYVTADQ 156
V ++K+WN IR+CL ++ C L + VTA+
Sbjct: 125 RVNNAKHWNSIRSCLYESKFCYNL--ELVTANH 155
>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1
Length = 284
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGF 60
MG S + +N + +L ++ +I G+W+++ D C +PV+ LG + L+S+ GF
Sbjct: 3 MGTSTFVIRWVNLLTMLLAVAVIIFGVWMSTHNDG-CRRSLTFPVIALGGFIFLISIIGF 61
Query: 61 IGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSW 120
+GA LL YL V+ I+++ +LV V AF+VT + PG YKEY+L+ +SSW
Sbjct: 62 LGACKRSVALLWIYLAVLLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSW 121
Query: 121 LRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQG 167
+ ++ NW ++++CL ++ C KLS++Y T Q SA ++P++
Sbjct: 122 FLKQLNNTSNWIRLKSCLVKSEQCRKLSKKYKTIKQLKSAELTPIEA 168
>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1
Length = 327
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 100/171 (58%), Gaps = 5/171 (2%)
Query: 1 MGVSNNITAVLNFIALLCSIPIIASGIWLASKPDN-ECIHLFRWPVVLLGVLVLLVSLCG 59
M +N+ ++NF L SIPI+ GIWL+S+ ++ +C+ +WP++++G+ ++++SL G
Sbjct: 1 MRSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAG 60
Query: 60 FIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSS 119
GA + + L+ YL M +I L+ +FA+VVT +V R Y +Y L+ +S
Sbjct: 61 IAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRRYLDYYLNDYSG 120
Query: 120 WLRDHVVDSKNWNKIRACLADTDTCSKLSQQY----VTADQFFSAHISPLQ 166
WL+D V D+ W I +C+ D+ C K+ + TA F+ ++SP++
Sbjct: 121 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVE 171
>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1
Length = 271
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 89/167 (53%), Gaps = 4/167 (2%)
Query: 3 VSNNITAVLNFIALLCSIPIIASGIWL-ASKPDNECIHLFRWPVVLLGVLVLLVSLCGFI 61
VSN + + N + +L I I++ + +C R P++ G+++ LVSL G I
Sbjct: 4 VSNFMVGLANTLVMLVGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVI 63
Query: 62 GAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWL 121
G+ + + + YL ++ IV L++ +F F VT V GR YKEYR FS+WL
Sbjct: 64 GSCFKENLAMVSYLIILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWL 123
Query: 122 RDHVVDSKNWNKIRACLADTDTCSKLSQQYVT--ADQFFSAHISPLQ 166
+ V K W IR+CLA+ + C LS V+ AD F+ ++SP+Q
Sbjct: 124 -NGFVGGKRWVGIRSCLAEANVCDDLSDGRVSQIADAFYHKNLSPIQ 169
>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1
Length = 281
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 3 VSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIG 62
+SN + LN + L+ SI ++ S +W+ + C H + P+++LG+ +L++S+ G +G
Sbjct: 4 MSNTVIGFLNILTLISSIVLLGSALWMG-RSKTTCEHFLQKPLLILGLAILILSVAGLVG 62
Query: 63 AYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLR 122
A +L YL M +IV L+ + +F F+VT G V GR YKE++L+ + WL+
Sbjct: 63 ACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGVVVDGRVYKEFKLEAYHPWLK 122
Query: 123 DHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQ 166
VVD+ W I+ CL + TCSKL+ T + +SPLQ
Sbjct: 123 TRVVDTNYWVTIKTCLLGSVTCSKLALW--TPLDYLQKDLSPLQ 164
>sp|Q9SI56|TET13_ARATH Tetraspanin-13 OS=Arabidopsis thaliana GN=TET13 PE=3 SV=1
Length = 278
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 2 GVSNNITAVLNFIALLCS-IPIIASGIWLAS-----KPDNECIHLFRWPVVLLGVLVLLV 55
+ N++ N I L+ S I ++ + W + +EC P + + +L +
Sbjct: 14 SIVQNMSFPFNTIFLISSAIFLVTAAFWFVAVMTLHYRTDECNRFVTTPGIFISFSLLAM 73
Query: 56 SLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLD 115
SL GF AY+ + L + + + + +++ +F + + PG E+R +
Sbjct: 74 SLTGFYAAYFKSDCLFRIHFFIFFLWMFVVVSKAIFVIFLHKETNPRLFPGTKIYEFRYE 133
Query: 116 KFSSWLRDHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQG---TRTAS 172
+S W+ V+ W + R CL + C++L+ + + A +F+ +++P+Q S
Sbjct: 134 DYSGWVSRLVIKDDEWYRTRRCLVKDNVCNRLNHK-MPASEFYQMNLTPIQSGCCKPPLS 192
Query: 173 CG 174
CG
Sbjct: 193 CG 194
>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1
Length = 264
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 3 VSNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIG 62
+SN N I L + ++ +++ + ++C + P+++ L+ +S G I
Sbjct: 4 LSNAAVITTNAILALIGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLGLIA 63
Query: 63 AYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLR 122
A + ++ YL + + I+LLLV+ VF F+VT P + GR + + +W+
Sbjct: 64 ALYGSHIIITLYLFFLFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQNWIG 123
Query: 123 DHVVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQ 166
+H + KNW I CL+D+ C + + + D S H+S +Q
Sbjct: 124 NHFLRGKNWEGITKCLSDSRVCKRFGPRDIDFD---SKHLSNVQ 164
>sp|Q12999|TSN31_HUMAN Tetraspanin-31 OS=Homo sapiens GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L S+ +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVT 96
+ + LL FY+ ++L +V +F FV++
Sbjct: 68 VNHHQVLLFFYM-------IILGLVFIFQFVIS 93
>sp|Q5RAP8|TSN31_PONAB Tetraspanin-31 OS=Pongo abelii GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L S+ +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVT 96
+ + LL FY+ ++L +V +F FV++
Sbjct: 68 VNHHQVLLFFYM-------IILGLVFIFQFVIS 93
>sp|Q32KP1|TSN31_BOVIN Tetraspanin-31 OS=Bos taurus GN=TSPAN31 PE=2 SV=1
Length = 210
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVGLLLIGVAAWAKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVL 84
+ + LL FY+ ++ ++ +
Sbjct: 68 VNHHQVLLFFYMIILGLVFIF 88
>sp|Q5U1V9|TSN31_RAT Tetraspanin-31 OS=Rattus norvegicus GN=Tspan31 PE=2 SV=1
Length = 210
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVGLLLIGVAAWGKGLGVVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVL 84
+ + LL FY+ ++ ++ +
Sbjct: 68 VNHHQVLLFFYMIILGLVFIF 88
>sp|Q9CQ88|TSN31_MOUSE Tetraspanin-31 OS=Mus musculus GN=Tspan31 PE=1 SV=1
Length = 210
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SRNALCALNVVYMLVGFLLIGVAAWGKGLGVVSSIHII-GGVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIVL 84
+ + LL FY+ ++ ++ +
Sbjct: 68 ANHHQVLLFFYMIILGLVFIF 88
>sp|Q7ZUB3|TSN31_DANRE Tetraspanin-31 OS=Danio rerio GN=tspan31 PE=2 SV=2
Length = 212
Score = 34.7 bits (78), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +G + L+++ G IGA
Sbjct: 9 SKNALCSLNVVYMLVGLLLIVVAAWGKGFGIVSSIHIIG-GVIAVGFFLQLIAIVGLIGA 67
Query: 64 YWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTRPDGSYYVPGRAYKEYRLDKFSSWLRD 123
+ + +L FY+ V+L VV +F F V+ S + +E L+ SSW
Sbjct: 68 VHHHQVMLFFYM-------VILFVVFLFQFGVSC---SCLAMNQGQQEKLLE--SSW--- 112
Query: 124 HVVDSKNWNKIRACLADT-DTCSKLSQQYVTADQFFSAHI--SP-LQGTRTASCGATTRV 179
N R L D C + + AD H+ SP Q +CG
Sbjct: 113 ----KIMSNDTRISLEKKLDCCGLFNSTNLQADIMSDLHLCTSPCTQKKECVTCGLKMLQ 168
Query: 180 NSA 182
+S+
Sbjct: 169 HSS 171
>sp|Q29257|TSN31_PIG Tetraspanin-31 (Fragment) OS=Sus scrofa GN=TSPAN31 PE=3 SV=1
Length = 109
Score = 34.7 bits (78), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 4 SNNITAVLNFIALLCSIPIIASGIWLASKPDNECIHLFRWPVVLLGVLVLLVSLCGFIGA 63
S N LN + +L + +I W IH+ V+ +GV +LL+++ G +GA
Sbjct: 9 SKNALCALNVVYMLVGLLLIGVAAWAKGLGLVSSIHIIG-GVIAVGVFLLLIAVAGLVGA 67
Query: 64 YWYKETLLAFYLCVMAILIV 83
+ + LL FY+ ++ ++ +
Sbjct: 68 VNHHQVLLFFYMIILGLVFI 87
>sp|O31464|GLNT_BACSU Probable sodium/glutamine symporter GlnT OS=Bacillus subtilis
(strain 168) GN=glnT PE=3 SV=2
Length = 478
Score = 33.9 bits (76), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 39 HLFRWPVVLLGVLVLLVSLCGFIGAYWYKETLLAF 73
H+ W L +L+LL C IG Y+Y ET + F
Sbjct: 340 HVGSWASGFLAILILLFGFCALIGNYYYGETNIGF 374
>sp|A1L157|TSN11_HUMAN Tetraspanin-11 OS=Homo sapiens GN=TSPAN11 PE=2 SV=2
Length = 253
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 10 VLNFIALLCSIPIIASGIW-LASKPD------NECIHLFRWPVVLLGVLVLLVSLCGFIG 62
V NF + ++A GIW L K + + ++ GVLV++ GF
Sbjct: 22 VFNFFFWVGGAAVLAVGIWTLVEKSGYLSVLASSTFAASAYILIFAGVLVMVTGFLGFGA 81
Query: 63 AYWYKETLLAFYLCVMAILIVLLLVVLVFAFV 94
W ++ L+ Y C++ ++ ++ LV V A V
Sbjct: 82 ILWERKGCLSTYFCLLLVIFLVELVAGVLAHV 113
>sp|Q6FP10|MED16_CANGA Mediator of RNA polymerase II transcription subunit 16 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=SIN4 PE=3 SV=1
Length = 973
Score = 31.6 bits (70), Expect = 3.3, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 125 VVDSKNWNKIRACLADTDTCSKLSQQYVTADQFFSAHISPLQGTRTASCGATTR 178
V+D KN + A D+ T +KL+ +T D+F +S + R CGA T+
Sbjct: 885 VIDEKN---MPATFRDSKTFTKLTYDGITYDRFSKEELSDNKLKRCNRCGAVTK 935
>sp|Q49V08|GLMU_STAS1 Bifunctional protein GlmU OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=glmU
PE=3 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 102 YYVPGRAYKEYRLDKFSSWLRDHVVD--SKNWNKIRACLADTDTCSKLSQQYVTAD--QF 157
+ V G+ E+ D D +V + ++ L DT S +Q TA +
Sbjct: 25 HDVAGKTMIEHVADNVKQSGIDQLVTIVGHGADSVKETLGDTSLYSFQEEQLGTAHAVKM 84
Query: 158 FSAHISPLQGTRTASCGATTRVNSATIAALAK 189
S H+S QGT CG T + +AT+ +L +
Sbjct: 85 ASEHLSESQGTTLVVCGDTPLITTATLKSLVE 116
>sp|Q68VK5|TSN5_RAT Tetraspanin-5 OS=Rattus norvegicus GN=Tspan5 PE=2 SV=2
Length = 268
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
>sp|P62080|TSN5_MOUSE Tetraspanin-5 OS=Mus musculus GN=Tspan5 PE=2 SV=1
Length = 268
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
>sp|P62079|TSN5_HUMAN Tetraspanin-5 OS=Homo sapiens GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
>sp|Q17QJ5|TSN5_BOVIN Tetraspanin-5 OS=Bos taurus GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 30.8 bits (68), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 43 WPVVLLGVLVLLVSLCGFIGAYWYKETLLAFYLCVMAILIVLLLVVLVFAFVVTR--PDG 100
W +++G ++ ++ G IGA LL F+ + I+ L L V AFV D
Sbjct: 63 WLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQ 122
Query: 101 SYYVPGRAYKEYRLD 115
Y+ + YR D
Sbjct: 123 LYFFINNNIRAYRDD 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.138 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,697,032
Number of Sequences: 539616
Number of extensions: 2583600
Number of successful extensions: 9515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 9470
Number of HSP's gapped (non-prelim): 77
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)