BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029343
(194 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224125100|ref|XP_002319500.1| predicted protein [Populus trichocarpa]
gi|222857876|gb|EEE95423.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 87/119 (73%), Gaps = 4/119 (3%)
Query: 44 MALTQHVLKPTINPPLYSFHRSLLTSKAPLSVQTHINS-LFST---PRGHYLQNRAPTFT 99
MALT + P S H+ LT+ P S +TH NS FST R H LQN PTFT
Sbjct: 1 MALTHNFNHIFPTPSSSSKHKHSLTTTLPFSPKTHTNSHFFSTNIPSRIHNLQNPLPTFT 60
Query: 100 RRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
RRLF+PSVSGIWDALTGGNNN REAV+AIRRGMLLFRQGDV+GS+ EFDKAIELD RQK
Sbjct: 61 RRLFLPSVSGIWDALTGGNNNPREAVMAIRRGMLLFRQGDVLGSLVEFDKAIELDTRQK 119
>gi|255542812|ref|XP_002512469.1| conserved hypothetical protein [Ricinus communis]
gi|223548430|gb|EEF49921.1| conserved hypothetical protein [Ricinus communis]
Length = 221
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 68/79 (86%), Gaps = 2/79 (2%)
Query: 82 LFST--PRGHYLQNRAPTFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGD 139
+FST R H LQ+ P +RRLF+P+VSGIWDALTG NNN+REAV+AIRRGMLLFRQGD
Sbjct: 1 MFSTIPSRIHNLQHPLPILSRRLFLPAVSGIWDALTGANNNAREAVLAIRRGMLLFRQGD 60
Query: 140 VVGSVAEFDKAIELDPRQK 158
V+GS+ EFDKA+ELDPRQK
Sbjct: 61 VLGSLVEFDKAMELDPRQK 79
>gi|356533558|ref|XP_003535330.1| PREDICTED: uncharacterized protein LOC100809261 [Glycine max]
Length = 255
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 79/122 (64%), Gaps = 27/122 (22%)
Query: 45 ALTQHVLKP---TINPPLYSFHRS----LLTSKAPLSVQTHINSLFSTPRGHYLQNRAPT 97
A H LKP ++P L+ HRS L+ KAP S +
Sbjct: 3 AFISHNLKPGGIMVSPSLH--HRSSFPLQLSLKAPFSASHPL-----------------V 43
Query: 98 FTRRLFIPSVSGIWDALTGGNNN-SREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPR 156
TRRLF+PSVSGIWDALTGGNNN +REAV+AIRRGMLLFRQGDV GS+AEFDKAI+LDPR
Sbjct: 44 LTRRLFLPSVSGIWDALTGGNNNNAREAVLAIRRGMLLFRQGDVSGSLAEFDKAIQLDPR 103
Query: 157 QK 158
QK
Sbjct: 104 QK 105
>gi|449454057|ref|XP_004144772.1| PREDICTED: uncharacterized protein LOC101209381 [Cucumis sativus]
Length = 267
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/62 (83%), Positives = 58/62 (93%), Gaps = 1/62 (1%)
Query: 97 TFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPR 156
+ +RRLF+PSVSGIWDALTGGNN R+AV AIRRGMLLFRQGDV+GS+AEFDKAIELDPR
Sbjct: 55 SLSRRLFVPSVSGIWDALTGGNN-PRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPR 113
Query: 157 QK 158
QK
Sbjct: 114 QK 115
>gi|124359146|gb|ABD28339.2| TPR repeat [Medicago truncatula]
Length = 263
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 57/64 (89%), Gaps = 2/64 (3%)
Query: 97 TFTRRLFIPSVSGIWDALTGG--NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELD 154
+RRLF+PSVSGIWDA+TGG NNN+ EA++AIRRGM LFRQG+V+GSV EFDKAI+LD
Sbjct: 50 NLSRRLFLPSVSGIWDAITGGSGNNNTNEALLAIRRGMSLFRQGEVLGSVVEFDKAIQLD 109
Query: 155 PRQK 158
PRQK
Sbjct: 110 PRQK 113
>gi|357441797|ref|XP_003591176.1| hypothetical protein MTR_1g083600 [Medicago truncatula]
gi|355480224|gb|AES61427.1| hypothetical protein MTR_1g083600 [Medicago truncatula]
gi|388510044|gb|AFK43088.1| unknown [Medicago truncatula]
Length = 265
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 57/64 (89%), Gaps = 2/64 (3%)
Query: 97 TFTRRLFIPSVSGIWDALTGG--NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELD 154
+RRLF+PSVSGIWDA+TGG NNN+ EA++AIRRGM LFRQG+V+GSV EFDKAI+LD
Sbjct: 50 NLSRRLFLPSVSGIWDAITGGSGNNNTNEALLAIRRGMSLFRQGEVLGSVVEFDKAIQLD 109
Query: 155 PRQK 158
PRQK
Sbjct: 110 PRQK 113
>gi|217073934|gb|ACJ85327.1| unknown [Medicago truncatula]
Length = 265
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 56/64 (87%), Gaps = 2/64 (3%)
Query: 97 TFTRRLFIPSVSGIWDALTGG--NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELD 154
+RRLF+PSVSGIWDA+TGG NNN+ EA++A RRGM LFRQG+V+GSV EFDKAI+LD
Sbjct: 50 NLSRRLFLPSVSGIWDAITGGSGNNNTNEALLATRRGMSLFRQGEVLGSVVEFDKAIQLD 109
Query: 155 PRQK 158
PRQK
Sbjct: 110 PRQK 113
>gi|297829092|ref|XP_002882428.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297328268|gb|EFH58687.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 257
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/116 (51%), Positives = 75/116 (64%), Gaps = 14/116 (12%)
Query: 44 MALTQHVLKPTINPPLYSFHRSLLTSKAPLSVQTHINSLFSTPRGHYLQNRAPTFTRRLF 103
M+LTQ ++ P I P R++ +S +N FS H L +RRLF
Sbjct: 1 MSLTQ-IVNPIIYP-----SRTIPRRFTAISPFQTLNPQFSRHPPHAL-------SRRLF 47
Query: 104 IPSVSGIWDALTGG-NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
+PSVS IWDA+TGG ++N REA+ A+RRGM LFRQGDV GSVAEFD+AI LDPRQK
Sbjct: 48 LPSVSSIWDAITGGGDSNPREAIAAVRRGMQLFRQGDVAGSVAEFDRAIVLDPRQK 103
>gi|225450751|ref|XP_002279298.1| PREDICTED: uncharacterized protein LOC100240883 [Vitis vinifera]
gi|296089711|emb|CBI39530.3| unnamed protein product [Vitis vinifera]
Length = 270
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 56/62 (90%), Gaps = 1/62 (1%)
Query: 97 TFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPR 156
+ +RRLF+PSVSGIW+ALTGG++ RE+ +AIRRGMLLFRQGDV GS+ EFDKAIELDPR
Sbjct: 58 SLSRRLFLPSVSGIWNALTGGDSY-RESAMAIRRGMLLFRQGDVSGSLVEFDKAIELDPR 116
Query: 157 QK 158
QK
Sbjct: 117 QK 118
>gi|30679555|ref|NP_683531.2| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|27311659|gb|AAO00795.1| Unknown protein [Arabidopsis thaliana]
gi|30023732|gb|AAP13399.1| At3g05625 [Arabidopsis thaliana]
gi|332640747|gb|AEE74268.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Query: 97 TFTRRLFIPSVSGIWDALTGG-NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDP 155
+RRLF+PSVS IWDA+TGG ++N REA+ A+RRGM LFRQGDV GSVAEFD+AI LDP
Sbjct: 41 ALSRRLFLPSVSSIWDAITGGGDSNPREAIAAVRRGMQLFRQGDVAGSVAEFDRAIILDP 100
Query: 156 RQK 158
RQK
Sbjct: 101 RQK 103
>gi|388511867|gb|AFK43995.1| unknown [Lotus japonicus]
Length = 257
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 62/77 (80%), Gaps = 9/77 (11%)
Query: 91 LQNRAPTF-------TRRLFIPSVSGIWDALTGGNNNS--REAVVAIRRGMLLFRQGDVV 141
L ++AP F TRRLF+PSVS IWDA+TGGNNN+ REA++AIRRGM LFRQGDV
Sbjct: 29 LPSKAPIFCSNPSILTRRLFLPSVSAIWDAVTGGNNNNNGREALLAIRRGMSLFRQGDVS 88
Query: 142 GSVAEFDKAIELDPRQK 158
GSV EFDKAI+LDPRQK
Sbjct: 89 GSVVEFDKAIQLDPRQK 105
>gi|147768214|emb|CAN73615.1| hypothetical protein VITISV_004109 [Vitis vinifera]
Length = 237
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 48/54 (88%), Gaps = 1/54 (1%)
Query: 105 PSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
P +SGIW+ALTGG++ REA +AIRRGMLLFRQGDV GS+ EFDKAIELDPRQK
Sbjct: 35 PLISGIWNALTGGDS-YREAAMAIRRGMLLFRQGDVSGSLVEFDKAIELDPRQK 87
>gi|413948041|gb|AFW80690.1| hypothetical protein ZEAMMB73_300704, partial [Zea mays]
Length = 163
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 96 PTFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDP 155
P RRL +P +GIWD ++GG + A +A+RRGM LFRQGDV GS+AEFDKAIE+DP
Sbjct: 47 PAVPRRLLLPVAAGIWDLISGGAGAAAAASLAVRRGMQLFRQGDVAGSLAEFDKAIEMDP 106
Query: 156 RQK 158
RQK
Sbjct: 107 RQK 109
>gi|195611418|gb|ACG27539.1| TPR repeat [Zea mays]
gi|413948040|gb|AFW80689.1| TPR repeat-containing domain protein [Zea mays]
Length = 261
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%)
Query: 96 PTFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDP 155
P RRL +P +GIWD ++GG + A +A+RRGM LFRQGDV GS+AEFDKAIE+DP
Sbjct: 47 PAVPRRLLLPVAAGIWDLISGGAGAAAAASLAVRRGMQLFRQGDVAGSLAEFDKAIEMDP 106
Query: 156 RQK 158
RQK
Sbjct: 107 RQK 109
>gi|242057293|ref|XP_002457792.1| hypothetical protein SORBIDRAFT_03g013720 [Sorghum bicolor]
gi|241929767|gb|EES02912.1| hypothetical protein SORBIDRAFT_03g013720 [Sorghum bicolor]
Length = 280
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 96 PTFTRRLF--IPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIEL 153
P RRL +P +GIWD ++GG A +A+RRGM LFRQGDV GS+AEFDKAIE+
Sbjct: 67 PAVPRRLLLPVPVAAGIWDLISGGAGG---ASLAVRRGMQLFRQGDVAGSLAEFDKAIEM 123
Query: 154 DPRQK 158
DPRQK
Sbjct: 124 DPRQK 128
>gi|116791178|gb|ABK25884.1| unknown [Picea sitchensis]
Length = 275
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%), Gaps = 5/67 (7%)
Query: 96 PTFTRRLFIPSVSGIWDA----LTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAI 151
P R L++ + S +WDA LTGG N++REA +A+RRGM LF QGDV SV EFDKAI
Sbjct: 53 PISRRNLWVAATS-LWDAITSSLTGGQNSAREAALAVRRGMQLFVQGDVEQSVVEFDKAI 111
Query: 152 ELDPRQK 158
ELDPRQK
Sbjct: 112 ELDPRQK 118
>gi|357132081|ref|XP_003567661.1| PREDICTED: uncharacterized protein LOC100828287 [Brachypodium
distachyon]
Length = 265
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 50/63 (79%)
Query: 96 PTFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDP 155
P RRL +P+ +GIWD L+GG + + A +A+RRGM LF+QGDV GSVAEFD+AIELDP
Sbjct: 47 PAVPRRLLLPAAAGIWDFLSGGASGAAAASLAVRRGMQLFKQGDVAGSVAEFDRAIELDP 106
Query: 156 RQK 158
RQK
Sbjct: 107 RQK 109
>gi|218188159|gb|EEC70586.1| hypothetical protein OsI_01794 [Oryza sativa Indica Group]
Length = 262
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 96 PTFTRRLFIPSVSGIWDALTGGNNNSREAV-VAIRRGMLLFRQGDVVGSVAEFDKAIELD 154
P RRL P +GIWD L+GG A +A+R GM LFRQGDV GSVAEFD+AIELD
Sbjct: 42 PAVPRRLLFPVAAGIWDFLSGGGAGGAAAASLAVRGGMQLFRQGDVAGSVAEFDRAIELD 101
Query: 155 PRQK 158
RQK
Sbjct: 102 QRQK 105
>gi|115436404|ref|NP_001042960.1| Os01g0343500 [Oryza sativa Japonica Group]
gi|113532491|dbj|BAF04874.1| Os01g0343500 [Oryza sativa Japonica Group]
gi|215701354|dbj|BAG92778.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 115
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 96 PTFTRRLFIPSVSGIWDALTGGNNNSREAV-VAIRRGMLLFRQGDVVGSVAEFDKAIELD 154
P RRL P +GIWD L+GG A +A+R GM LFRQGDV GSVAEFD+AIELD
Sbjct: 47 PAVPRRLLFPVAAGIWDFLSGGGAGGAAAASLAVRGGMQLFRQGDVAGSVAEFDRAIELD 106
Query: 155 PRQK 158
RQK
Sbjct: 107 QRQK 110
>gi|222618378|gb|EEE54510.1| hypothetical protein OsJ_01653 [Oryza sativa Japonica Group]
Length = 190
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 96 PTFTRRLFIPSVSGIWDALTGGNNNSREAV-VAIRRGMLLFRQGDVVGSVAEFDKAIELD 154
P RRL P +GIWD L+GG A +A+R GM LFRQGDV GSVAEFD+AIELD
Sbjct: 42 PAVPRRLLFPVAAGIWDFLSGGGAGGAAAASLAVRGGMQLFRQGDVAGSVAEFDRAIELD 101
Query: 155 PRQK 158
RQK
Sbjct: 102 QRQK 105
>gi|168062428|ref|XP_001783182.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665324|gb|EDQ52013.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 203
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 113 ALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
A +GG + A++A RRGM LF QGDV GSV EFDKA+ELDPRQ+
Sbjct: 2 ATSGGGREA--AILATRRGMNLFAQGDVKGSVVEFDKALELDPRQR 45
>gi|428314582|ref|YP_007151029.1| hypothetical protein Mic7113_6698 [Microcoleus sp. PCC 7113]
gi|428256306|gb|AFZ22261.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 118
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 93 NRAPTFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIE 152
NRA + + P V I D+ + N A I RG+ + QG+ ++A++DKAIE
Sbjct: 20 NRAAAYNEQKNYPKV--IADSSRAISLNPTYANAYINRGVAYYYQGNYQQAIADYDKAIE 77
Query: 153 LDP 155
LDP
Sbjct: 78 LDP 80
>gi|299116882|emb|CBN74992.1| binding [Ectocarpus siliculosus]
Length = 208
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 128 IRRGMLLFRQGDVVGSVAEFDKAIELDPR 156
+ RGM FR+G+V GSV++FD+AI L PR
Sbjct: 20 VGRGMERFRRGEVAGSVSDFDRAISLQPR 48
>gi|428300949|ref|YP_007139255.1| heat shock protein DnaJ domain-containing protein [Calothrix sp.
PCC 6303]
gi|428237493|gb|AFZ03283.1| heat shock protein DnaJ domain protein [Calothrix sp. PCC 6303]
Length = 314
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Query: 76 QTHINSLFSTPRGHYLQNRAPTFTRRLFIPSVSGIWDALTGGNNNSREAVVAIRRGMLLF 135
+TH S+ S YL+ T+ + + + DA+ NNSR + G++
Sbjct: 188 ETHEESVVS----QYLRRAQELMTKNQLVQARIELQDAIKLSPNNSRCHTLI---GVVYL 240
Query: 136 RQGDVVGSVAEFDKAIELDPRQKISGKGAYRFTISIGTK 174
+Q V + FD+A++LDP + + +G + +G K
Sbjct: 241 KQNQVTMAKVHFDRALQLDPNDQTASEGKRKIEHVLGNK 279
>gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
9303]
gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
9303]
Length = 581
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 124 AVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPR 156
A+ + RG+ + GD+ G++A+ +KAIELDPR
Sbjct: 497 ALAYVNRGLAKIKSGDIQGAIADSNKAIELDPR 529
>gi|124024557|ref|YP_001018864.1| hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
9303]
gi|123964843|gb|ABM79599.1| Hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
9303]
Length = 306
Score = 39.3 bits (90), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKISGKGAYRFTISIGTKF 175
+++ A V +RG F +GD G++AEF+KAIE++P+ GAY T GTK
Sbjct: 42 DAQSAAVFNKRGYAKFNKGDYQGALAEFNKAIEINPQD----AGAY--TSRSGTKL 91
>gi|409989911|ref|ZP_11273378.1| hypothetical protein APPUASWS_03493 [Arthrospira platensis str.
Paraca]
gi|409939226|gb|EKN80423.1| hypothetical protein APPUASWS_03493 [Arthrospira platensis str.
Paraca]
Length = 206
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 118 NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
++ R+ IRRGM+ F+ G + S+ +FD+A LDPR K
Sbjct: 19 SDRPRDPDAYIRRGMVYFKLGQIAESIKDFDQAEALDPRIK 59
>gi|291570836|dbj|BAI93108.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 206
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 118 NNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
++ R+ IRRGM+ F+ G + S+ +FD+A LDPR K
Sbjct: 19 SDRPRDPDAYIRRGMVYFKLGQIAESIKDFDQAEALDPRIK 59
>gi|434388032|ref|YP_007098643.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
gi|428019022|gb|AFY95116.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
Length = 192
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 124 AVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKIS--GKGAYRFTISIGTKFFTFYSR 181
A + RG+L R GD G++A++D+AI+LD R IS +G R+ + Y R
Sbjct: 75 AKAYVNRGLLRDRLGDRQGALADYDRAIQLDERSTISYYNRGNVRYRLEDLHGALVDYDR 134
>gi|375256532|ref|YP_005015699.1| tetratricopeptide repeat protein [Tannerella forsythia ATCC 43037]
gi|363408864|gb|AEW22550.1| tetratricopeptide repeat protein [Tannerella forsythia ATCC 43037]
Length = 695
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 95 APTFTRRLFIPSVSGIW-DALTGGNN----NSREAVVAIRRGMLLFRQGDVVGSVAEFDK 149
AP + R + +G + DAL N N+RE+ I RG++ ++ D+ G++A++D+
Sbjct: 193 APCYGNRAIVLYQTGRFKDALADLNEAIRLNTRESGYYINRGLVRYQMNDLRGAMADYDQ 252
Query: 150 AIELDPRQKIS 160
I++D R I+
Sbjct: 253 VIDMDNRNLIA 263
>gi|359457135|ref|ZP_09245698.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 566
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 23/28 (82%)
Query: 130 RGMLLFRQGDVVGSVAEFDKAIELDPRQ 157
RG L FRQG+V ++A++D+AI+L P++
Sbjct: 436 RGRLQFRQGEVAKAIADYDQAIQLKPKE 463
>gi|148257917|ref|YP_001242502.1| hypothetical protein BBta_6700 [Bradyrhizobium sp. BTAi1]
gi|146410090|gb|ABQ38596.1| hypothetical protein BBta_6700 [Bradyrhizobium sp. BTAi1]
Length = 355
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 117 GNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPR 156
GN S +A RGM F++GD+ ++++ D AI+LDPR
Sbjct: 218 GNAPSNDARAFHDRGMASFQKGDLSAALSDLDTAIQLDPR 257
>gi|434399895|ref|YP_007133899.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428270992|gb|AFZ36933.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 515
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Query: 130 RGMLLFRQGDVVGSVAEFDKAIELDPRQKIS--GKGAYR 166
RG L ++ GD+VG++A+F++A+ ++P+ ++S G+G R
Sbjct: 247 RGQLRYQLGDIVGALADFEQALTINPQDEVSCIGRGNVR 285
>gi|209524914|ref|ZP_03273459.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|376002836|ref|ZP_09780657.1| Expressed protein,Tetratricopeptide TPR repeat protein [Arthrospira
sp. PCC 8005]
gi|423067432|ref|ZP_17056222.1| TPR repeat-containing protein [Arthrospira platensis C1]
gi|209494563|gb|EDZ94873.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|375328742|emb|CCE16410.1| Expressed protein,Tetratricopeptide TPR repeat protein [Arthrospira
sp. PCC 8005]
gi|406711006|gb|EKD06208.1| TPR repeat-containing protein [Arthrospira platensis C1]
Length = 206
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 128 IRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
IRRGM+ F+ G + S+ +FD+A LDPR K
Sbjct: 29 IRRGMVYFKLGQIAESIKDFDQAEALDPRIK 59
>gi|119357984|ref|YP_912628.1| hypothetical protein Cpha266_2203 [Chlorobium phaeobacteroides DSM
266]
gi|119355333|gb|ABL66204.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 331
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQ 157
N +EA+ + RG+ GD+ G++A++ KAIE+DP+
Sbjct: 113 NPKEALAYVNRGLSKDSIGDLPGAIADYTKAIEIDPKN 150
>gi|115380289|ref|ZP_01467302.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
gi|115362700|gb|EAU61922.1| tetratricopeptide repeat domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 160
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
N+++A + RG + R GD+V + +F +A++LDP K
Sbjct: 91 NAKDAAALVNRGEVRLRLGDIVEAAQDFARAVDLDPENK 129
>gi|310820322|ref|YP_003952680.1| hypothetical protein STAUR_3061 [Stigmatella aurantiaca DW4/3-1]
gi|309393394|gb|ADO70853.1| Tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 146
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQK 158
N+++A + RG + R GD+V + +F +A++LDP K
Sbjct: 77 NAKDAAALVNRGEVRLRLGDIVEAAQDFARAVDLDPENK 115
>gi|434385177|ref|YP_007095788.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
gi|428016167|gb|AFY92261.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
Length = 496
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 120 NSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPR--QKISGKGAYRFTISIGTKFFT 177
N R A+ + RG++ GD G++++F++AIE+DP+ Q + +GA ++ +
Sbjct: 81 NPRYALAHVNRGVVRSALGDRQGALSDFNRAIEIDPKYPQAYNNRGAIKYELGNKRGAIE 140
Query: 178 FYSR 181
Y+R
Sbjct: 141 DYTR 144
>gi|435852070|ref|YP_007313656.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433662700|gb|AGB50126.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 1078
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 109 GIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKISGKGAYRFT 168
G +D + +S++A+ +G+ L R G +VA +D+ +ELDP T
Sbjct: 836 GSYDKIIAEQPDSKDAIY--HKGLALDRMGRYDDAVACYDQLLELDPSD----------T 883
Query: 169 ISIGTKFFTFYSR 181
+ +GTK F+FY R
Sbjct: 884 LVMGTKAFSFYLR 896
>gi|303271973|ref|XP_003055348.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463322|gb|EEH60600.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 186
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 129 RRGMLLFRQGDVVGSVAEFDKAIELDPRQ 157
RRGM F + DV GSVA+FD+ I LD R+
Sbjct: 9 RRGMAKFARDDVEGSVADFDQVIALDGRR 37
>gi|189346021|ref|YP_001942550.1| hypothetical protein Clim_0478 [Chlorobium limicola DSM 245]
gi|189340168|gb|ACD89571.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
245]
Length = 343
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 107 VSGIWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDP 155
S ++ A+ GN S EA RG+ GDV G+VA++ +A++LDP
Sbjct: 45 ASALYTAVLSGNPRSAEAYN--NRGLCKAASGDVTGAVADYSEALKLDP 91
>gi|374575166|ref|ZP_09648262.1| hypothetical protein Bra471DRAFT_03786 [Bradyrhizobium sp. WSM471]
gi|374423487|gb|EHR03020.1| hypothetical protein Bra471DRAFT_03786 [Bradyrhizobium sp. WSM471]
Length = 545
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 114 LTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKISGKGAYRF 167
+ G +NNS +A ++ GM L G+ +VA F + IE +P + + AYR
Sbjct: 1 MAGESNNSNDATSLLKEGMRLLESGEFGAAVAAFSRVIEAEPGRAV----AYRL 50
>gi|395773940|ref|ZP_10454455.1| hypothetical protein Saci8_29409 [Streptomyces acidiscabies 84-104]
Length = 488
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 110 IWDALTGGNNNSREAVVAIRRGMLLFRQGDVVGSVAEFDKAIELDPRQKISGKGAYRFTI 169
++DA N+ + +A + + G L + +GD ++ F +A+ LDP Q+ + G R
Sbjct: 236 LYDASAKANSPAEQAALLEQAGQLSWERGDFPDALRHFQEAVRLDPDQRAAQAGEGRALA 295
Query: 170 SIG 172
++G
Sbjct: 296 ALG 298
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,945,538,724
Number of Sequences: 23463169
Number of extensions: 117036234
Number of successful extensions: 357714
Number of sequences better than 100.0: 54
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 357607
Number of HSP's gapped (non-prelim): 100
length of query: 194
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 59
effective length of database: 9,191,667,552
effective search space: 542308385568
effective search space used: 542308385568
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 72 (32.3 bits)