BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029346
(194 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|168022302|ref|XP_001763679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685172|gb|EDQ71569.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 413
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 110/190 (57%), Gaps = 8/190 (4%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
ES+ +L + A + + + N F + L +G + + L++++ LK
Sbjct: 232 ESDALFILLVEKDAAFMRLAEDRFYNRFPCVILTAKGQPDVATR----LFLKKMKTDLKL 287
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
VLG D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL KY IP+ CR
Sbjct: 288 PVLGLVDSDPYGLKILSVYMSGSKNMSYDSSNLTTPDIKWLGVRPSDLNKYKIPEQCRLP 347
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
+S DI K LE+ F++ + +W KEL+ M K EKAEI+AL + ++YL+ YL
Sbjct: 348 MSDQDIKTGKDMLEED----FIKKDKNWVKELELMVKTKEKAEIQALSSFGFQYLSEVYL 403
Query: 185 PSKFRAEDWL 194
P K + EDW+
Sbjct: 404 PLKLQQEDWI 413
>gi|326521994|dbj|BAK04125.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 256 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 311
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 312 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 371
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR +S DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 372 CRLPMSDHDIKVGKEMLEED----FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLT 427
Query: 181 NKYLPSKFRAEDWL 194
YLP K + EDW+
Sbjct: 428 EVYLPLKLQQEDWI 441
>gi|27476077|gb|AAO17008.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108707550|gb|ABF95345.1| DNA topoisomerase VIA, putative, expressed [Oryza sativa Japonica
Group]
Length = 830
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 645 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 700
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 701 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 760
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 761 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLT 816
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 817 EVYLPLKLQQQDWI 830
>gi|125543392|gb|EAY89531.1| hypothetical protein OsI_11065 [Oryza sativa Indica Group]
Length = 830
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 645 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 700
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 701 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 760
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 761 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLT 816
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 817 EVYLPLKLQQQDWI 830
>gi|195647934|gb|ACG43435.1| RHL2 [Zea mays]
Length = 436
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 251 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 306
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 307 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 366
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 367 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLT 422
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 423 EVYLPLKLQEQDWI 436
>gi|226497286|ref|NP_001141583.1| uncharacterized protein LOC100273699 [Zea mays]
gi|194705154|gb|ACF86661.1| unknown [Zea mays]
gi|414866232|tpg|DAA44789.1| TPA: RHL2 [Zea mays]
Length = 436
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 251 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 306
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 307 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 366
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 367 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLT 422
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 423 EVYLPLKLQEQDWI 436
>gi|297600747|ref|NP_001049765.2| Os03g0284800 [Oryza sativa Japonica Group]
gi|150371045|dbj|BAF65346.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|255674417|dbj|BAF11679.2| Os03g0284800 [Oryza sativa Japonica Group]
Length = 442
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 257 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 312
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 313 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 372
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 373 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLT 428
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 429 EVYLPLKLQQQDWI 442
>gi|242041321|ref|XP_002468055.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
gi|241921909|gb|EER95053.1| hypothetical protein SORBIDRAFT_01g038780 [Sorghum bicolor]
Length = 436
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 251 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 306
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 307 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 366
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 367 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELEMMLRTKQKAEIQALSSFGFQYLT 422
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 423 EVYLPLKLQEQDWI 436
>gi|194697080|gb|ACF82624.1| unknown [Zea mays]
gi|414866233|tpg|DAA44790.1| TPA: hypothetical protein ZEAMMB73_994877 [Zea mays]
Length = 200
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 15 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 70
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 71 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 130
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 131 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLT 186
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 187 EVYLPLKLQEQDWI 200
>gi|125585844|gb|EAZ26508.1| hypothetical protein OsJ_10402 [Oryza sativa Japonica Group]
Length = 526
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 341 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 396
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 397 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 456
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 457 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLT 512
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 513 EVYLPLKLQQQDWI 526
>gi|357120049|ref|XP_003561743.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Brachypodium
distachyon]
Length = 464
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 279 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 334
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY +P+
Sbjct: 335 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQ 394
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ D+ K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 395 CRLPMTDHDMKVGKEMLEED----FVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLT 450
Query: 181 NKYLPSKFRAEDWL 194
YLP K + EDW+
Sbjct: 451 EVYLPLKLQQEDWI 464
>gi|225439757|ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
Length = 420
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 8/192 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A I + + N F I + +G + + LR+++ +L
Sbjct: 237 DMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLRKMKTEL 292
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY+IP+ CR
Sbjct: 293 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCR 352
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
+++ DI K LE+ FV+ N W +EL M K +KAEI+AL + ++YL+
Sbjct: 353 LPMTEQDIKTGKDLLEED----FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEV 408
Query: 183 YLPSKFRAEDWL 194
YLP K + +DWL
Sbjct: 409 YLPLKLQQQDWL 420
>gi|449018621|dbj|BAM82023.1| DNA topoisomerase VI subunit A [Cyanidioschyzon merolae strain 10D]
Length = 433
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ LR ++ +L +LG D +PYG+ IL+VYM GSK M+ + LA P+IKWLG+ P+DL
Sbjct: 296 LFLRRLKRELHLPILGLVDSDPYGLKILSVYMSGSKGMSYDSANLATPDIKWLGIRPTDL 355
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++Y IP+ CR ++++D+ K LE+ F++ N +W +EL M K EKAEI+AL
Sbjct: 356 DRYGIPEQCRLAMTENDLKTGKDMLEED----FIKKNPAWHRELSLMVKRKEKAEIQALS 411
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++YL YLP K R DW+
Sbjct: 412 NFGFQYLTEVYLPEKIRHGDWI 433
>gi|302807688|ref|XP_002985538.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
gi|300146744|gb|EFJ13412.1| hypothetical protein SELMODRAFT_122380 [Selaginella moellendorffii]
Length = 415
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
+ + ES+ +L + A + + + N F + + +G + + LR+++
Sbjct: 230 IQDMESDALFILLVEKDAAFMRLAEDRFYNRFPCVIVTAKGQPDVATR----LFLRKMKM 285
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+L+ VLG D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY IP+
Sbjct: 286 ELRLPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDKYRIPQQ 345
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR +S+ D+ + LE+ F++ + W +EL+ M K EKAEI+AL + ++YL+
Sbjct: 346 CRLPMSELDVKTGRDLLEED----FIKKDPRWYQELELMVKNKEKAEIQALSSFGFQYLS 401
Query: 181 NKYLPSKFRAEDWL 194
YLP K + DW+
Sbjct: 402 EVYLPMKLQERDWI 415
>gi|297741485|emb|CBI32617.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 8/192 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A I + + N F I + +G + + LR+++ +L
Sbjct: 280 DMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLRKMKTEL 335
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY+IP+ CR
Sbjct: 336 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCR 395
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
+++ DI K LE+ FV+ N W +EL M K +KAEI+AL + ++YL+
Sbjct: 396 LPMTEQDIKTGKDLLEED----FVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEV 451
Query: 183 YLPSKFRAEDWL 194
YLP K + +DWL
Sbjct: 452 YLPLKLQQQDWL 463
>gi|302810679|ref|XP_002987030.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
gi|300145195|gb|EFJ11873.1| hypothetical protein SELMODRAFT_125304 [Selaginella moellendorffii]
Length = 415
Score = 132 bits (332), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 113/194 (58%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
+ + ES+ +L + A + + + N F + + +G + + LR+++
Sbjct: 230 IQDMESDALFILLVEKDAAFMRLAEDRFYNRFPCVIVTAKGQPDVATR----LFLRKMKM 285
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+L+ VLG D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL+KY IP+
Sbjct: 286 ELRLPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDKYRIPQQ 345
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR +S+ D+ + LE+ F++ + W +EL+ M K EKAEI+AL + ++YL+
Sbjct: 346 CRLPMSELDVKTGRDLLEED----FIKKDPRWYQELELMVKNKEKAEIQALSSFGFQYLS 401
Query: 181 NKYLPSKFRAEDWL 194
YLP K + DW+
Sbjct: 402 EVYLPMKLQERDWI 415
>gi|224069320|ref|XP_002326329.1| predicted protein [Populus trichocarpa]
gi|222833522|gb|EEE71999.1| predicted protein [Populus trichocarpa]
Length = 423
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ LR+++ +LK VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL
Sbjct: 286 LFLRKMKTELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 345
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+KY IP+ CR +++ DI K LE+ FV+ N W +EL M K +KAEI+AL
Sbjct: 346 DKYKIPEQCRLPMTEQDIKTGKDLLEED----FVKKNPGWVEELSLMVKTKQKAEIQALS 401
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++YL+ YLP K + +DWL
Sbjct: 402 SFGFQYLSEVYLPLKLQQQDWL 423
>gi|53127616|emb|CAD79468.1| Topoisomerase VI subunit A [Oryza sativa Indica Group]
Length = 442
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
++ ES+ +L + A + + + N F I L +G + + LR ++
Sbjct: 257 VSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPDVATR----LFLRRLKV 312
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+LK VL D +PYG+ IL+VYM GSKNM+ + L P+IKW G+ PSDL+KY +P+
Sbjct: 313 ELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWPGVRPSDLDKYRVPEQ 372
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ DI K LE+ FV+ N W KEL+ M + +KAEI+AL + ++YL
Sbjct: 373 CRLPMTDHDIKVGKELLEED----FVKQNEGWVKELETMLRTRQKAEIQALSSFGFQYLT 428
Query: 181 NKYLPSKFRAEDWL 194
YLP K + +DW+
Sbjct: 429 EVYLPLKLQQQDWI 442
>gi|449448703|ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
gi|449521501|ref|XP_004167768.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
Length = 420
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 110/192 (57%), Gaps = 8/192 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A I + + N F I + +G + + LR+++ +L
Sbjct: 237 DMQSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLRKMKMEL 292
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 293 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 352
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
+++ DI K LE+ FV+ N W +EL M K +KAEI+AL + ++YL+
Sbjct: 353 LPMTEQDIKTGKDLLEED----FVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEV 408
Query: 183 YLPSKFRAEDWL 194
YLP K + +DWL
Sbjct: 409 YLPLKLQQKDWL 420
>gi|356548204|ref|XP_003542493.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 417
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 8/192 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A + + + N F I + +G + + + LR+++ +L
Sbjct: 234 DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTR----LFLRKMKTEL 289
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 290 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCR 349
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
+++ DI K LE+ FV+ N W +EL M K +KAEI+AL + ++YL+
Sbjct: 350 LPMTEQDIKTGKDLLEED----FVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLSEV 405
Query: 183 YLPSKFRAEDWL 194
YLP K + +DWL
Sbjct: 406 YLPLKLQQKDWL 417
>gi|15241959|ref|NP_195902.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|297806215|ref|XP_002870991.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|75335684|sp|Q9LZ03.1|TOP6A_ARATH RecName: Full=DNA topoisomerase 6 subunit A; Short=AtTOP6A;
AltName: Full=Meiotic recombination protein SPO11-3;
Short=AtSPO11-3; AltName: Full=Protein BRASSINOSTEROID
INSENSITIVE 5; AltName: Full=Protein ROOT HAIRLESS 2
gi|15488539|gb|AAL01152.1|AF323679_1 putative topoisomerase VI subunit A [Arabidopsis thaliana]
gi|7413557|emb|CAB86036.1| meiosis specific-like protein [Arabidopsis thaliana]
gi|12331186|emb|CAC24689.1| topoisomerase 6 subunit A [Arabidopsis thaliana]
gi|114213517|gb|ABI54341.1| At5g02820 [Arabidopsis thaliana]
gi|297316828|gb|EFH47250.1| hypothetical protein ARALYDRAFT_487058 [Arabidopsis lyrata subsp.
lyrata]
gi|332003139|gb|AED90522.1| DNA topoisomerase 6 subunit A [Arabidopsis thaliana]
Length = 427
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ LR+++ +LK VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL
Sbjct: 290 LFLRKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDL 349
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+KY IP+ CR +++ DI K LE+ FV+ N W +EL M K +KAEI+AL
Sbjct: 350 DKYKIPEQCRLPMTEQDIKTGKDMLEED----FVKKNPGWVEELNLMVKTKQKAEIQALS 405
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++YL+ YLP K + +DWL
Sbjct: 406 SFGFQYLSEVYLPLKLQQQDWL 427
>gi|255568446|ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223535494|gb|EEF37163.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 421
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 8/192 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A + + + N F I + +G + + LR+++ +L
Sbjct: 238 DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLRKMKMEL 293
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 294 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 353
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
+++ DI K LE+ FV+ N W +EL M K +KAEI+AL + ++YL+
Sbjct: 354 LPMTEQDIKTGKDLLEED----FVKKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEV 409
Query: 183 YLPSKFRAEDWL 194
YLP K + +DWL
Sbjct: 410 YLPLKLQQQDWL 421
>gi|356537457|ref|XP_003537243.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Glycine max]
Length = 419
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 111/192 (57%), Gaps = 8/192 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A + + + N F I + +G + + + LR+++ +L
Sbjct: 236 DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVSTR----LFLRKMKIEL 291
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 292 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCR 351
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
+++ DI K LE+ FV+ N W +EL M K +KAEI+AL + ++YL+
Sbjct: 352 LPMTEQDIKTGKDLLEED----FVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLSEV 407
Query: 183 YLPSKFRAEDWL 194
YLP K + +DWL
Sbjct: 408 YLPLKLQQKDWL 419
>gi|219111201|ref|XP_002177352.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217411887|gb|EEC51815.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 430
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 93/142 (65%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L I +LK VLG D +PYG+ IL+VYM GSKNM+ + L P+IKWLGL PSDL
Sbjct: 293 MFLARITSELKIPVLGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDL 352
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+KY++P+ CR ++++DI K +++ F++ N W KEL+ M K +KAEI+AL
Sbjct: 353 DKYDLPEQCRLDMTENDIKTGKEMMKED----FIQKNPEWMKELEIMVKTKKKAEIQALS 408
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++Y+ +YLP K + DW+
Sbjct: 409 SFGFQYVTEQYLPRKLKEGDWI 430
>gi|298711265|emb|CBJ26510.1| DNA topoisomerase VI subunit A [Ectocarpus siliculosus]
Length = 639
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 70/190 (36%), Positives = 109/190 (57%), Gaps = 23/190 (12%)
Query: 24 ITNTVSNFFIVIRLIREGAANRTCENK-------IVI------------LLREIRCKLKK 64
ITN S+ ++ + +E A R E++ IVI L+ ++ +L
Sbjct: 454 ITNIRSDADFILLVEKEAAYMRMAEDRFYQKYPCIVITAKGQPDVATRLFLKRLKRELNI 513
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+G D +PYG+ IL+VYM GSKNM+ + L P+IKWLG+ PSDL++YNIP+ CR
Sbjct: 514 PVMGLVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGVRPSDLDRYNIPEQCRLD 573
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
+++ DI K L++ F++ N W +EL+ M K +KAEI++L + ++YL YL
Sbjct: 574 MTEHDIKTGKELLQED----FIKKNEPWCRELELMIKSKKKAEIQSLSAFGFQYLTQNYL 629
Query: 185 PSKFRAEDWL 194
P K + DW+
Sbjct: 630 PQKLQNGDWV 639
>gi|384248976|gb|EIE22459.1| topoisomerase [Coccomyxa subellipsoidea C-169]
Length = 418
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 112/194 (57%), Gaps = 8/194 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
+T+ +S+ +L + A + + + N + I L +G + + LR++R
Sbjct: 233 VTDIQSDALFILLVEKDAAFMRLAEDRFYNTYPCIILTAKGQPDVASR----LFLRKLRD 288
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
L+ VL D +PYG+ IL+VYM GS NM+ + L P+IKWLG+ PSDL+++NIP+
Sbjct: 289 TLRIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDLDRFNIPQQ 348
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
CR ++ +DI K LE+ F+++NA W KEL+ M KAEI+AL + ++YL+
Sbjct: 349 CRLPMTDEDIRTGKRLLEED----FIQANAEWVKELEIMIASKVKAEIQALSSFGFQYLS 404
Query: 181 NKYLPSKFRAEDWL 194
YLP K + DW+
Sbjct: 405 QVYLPLKLQEGDWI 418
>gi|397618186|gb|EJK64792.1| hypothetical protein THAOC_14439 [Thalassiosira oceanica]
Length = 138
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 90/142 (63%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L I +L+ VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLGL PSDL
Sbjct: 1 MFLSRITSELQIPVLALVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDL 60
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+Y++P CR ++++DI K L++ AF+ N W KELQ M K EKAEI+AL
Sbjct: 61 NRYDLPDQCRLKMTENDIKTGKELLQE----AFIAKNPLWMKELQIMVKTKEKAEIQALS 116
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++Y+ +YLP K R DW+
Sbjct: 117 SFGFQYITEEYLPRKLREGDWI 138
>gi|224011048|ref|XP_002294481.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
gi|220969976|gb|EED88315.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L I +L+ VL D +PYG+ IL+VYM GSKNM+ + L P+IKWLGL PSDL
Sbjct: 215 MFLSRITSELQIPVLALVDSDPYGLKILSVYMSGSKNMSYDSASLTTPDIKWLGLRPSDL 274
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+Y++P CR ++++DI K L++ AF+ N W KELQ M K +KAEI+AL
Sbjct: 275 NRYDLPDQCRLNMTENDIKTGKELLQE----AFIMKNPKWMKELQIMVKTKQKAEIQALS 330
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++Y+ YLP K + DW+
Sbjct: 331 SFGFQYITEVYLPRKLKEGDWI 352
>gi|428170368|gb|EKX39294.1| Spo11-3/Rhl2/Bin5/Top6A3 vegetative topoisomerase VIA [Guillardia
theta CCMP2712]
Length = 385
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ LR ++ LK +LG FD + +G+ IL+VYM GS+ M+ + LA P+IKWLG+ PSDL
Sbjct: 248 MFLRRVKDALKIPILGLFDSDAHGLKILSVYMQGSEAMSHDSANLATPDIKWLGVRPSDL 307
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+KYN+P+ CR L+ D+S ++ EK +++ ++W KEL+ + EKAEI+A
Sbjct: 308 DKYNVPRECRLELTTHDVSFAESLKEK----PYIQKRSAWVKELETLLSRKEKAEIQAFT 363
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
++YL +YLP K R DW+
Sbjct: 364 SKGFQYLTQEYLPRKLREGDWV 385
>gi|302831884|ref|XP_002947507.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
gi|300267371|gb|EFJ51555.1| hypothetical protein VOLCADRAFT_103453 [Volvox carteri f.
nagariensis]
Length = 412
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L+ ++ LK VL D +PYG+ IL+VYM GS NM+ + L P+IKWLG+ PSDL
Sbjct: 275 LFLKRLKSTLKIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDL 334
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+++NIP+ CR ++++DI + LE+ F+R+N W KEL+ M KAEI+AL
Sbjct: 335 DRFNIPQQCRLPMTEEDIKTGRRLLEED----FIRANPEWVKELELMLATKVKAEIQALS 390
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++YL YLP K + DW+
Sbjct: 391 SFGFQYLTQVYLPLKLQEGDWV 412
>gi|307106398|gb|EFN54644.1| hypothetical protein CHLNCDRAFT_31596 [Chlorella variabilis]
Length = 416
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ LR+++ L+ VL D +PYG+ IL+VYM GS NM+ + L P+IKWLG+ PSDL
Sbjct: 279 LFLRKLKQVLRIPVLALVDSDPYGLKILSVYMKGSMNMSYDSSNLTTPDIKWLGVRPSDL 338
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++++IP+ CR ++ +DI K LE+ FV++N W KEL+ M KAEI+AL
Sbjct: 339 DRFSIPQQCRLPMTDEDIKTGKKLLEED----FVKANPEWVKELEIMVTTKVKAEIQALS 394
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++YL+ +YLP K + DW+
Sbjct: 395 SFGFQYLSQQYLPLKLQEGDWI 416
>gi|323455743|gb|EGB11611.1| hypothetical protein AURANDRAFT_52497 [Aureococcus anophagefferens]
Length = 407
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 23/190 (12%)
Query: 24 ITNTVSNFFIVIRLIREGAANRTCENKIV-------------------ILLREIRCKLKK 64
I+N S+ ++ + ++ A NR E++ + L ++ +LK
Sbjct: 222 ISNIRSDAEFILLVEKDAAYNRLAEDRFYNQFPCILITGKGQPDVATRMFLSRLKAELKI 281
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
VL D +PYG+ IL+VYM GSK M+ L P+IKWLGL PSDL+ YN+P CR
Sbjct: 282 PVLAFVDSDPYGLKILSVYMSGSKAMSYDANSLTTPDIKWLGLRPSDLDAYNLPDQCRLP 341
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
++ DI K L++ FV N W KEL++M +KAEI+AL + ++++ YL
Sbjct: 342 MTPKDIEMGKQLLKED----FVLKNKQWVKELERMLHTKQKAEIQALSAFGFQFVTQVYL 397
Query: 185 PSKFRAEDWL 194
P K R DW+
Sbjct: 398 PRKLRQGDWI 407
>gi|412989091|emb|CCO15682.1| predicted protein [Bathycoccus prasinos]
Length = 424
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 89/142 (62%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L +++ +LK VL D +PYG+ I++VYM GSKNMA + L P+IKWLG+ PSDL
Sbjct: 287 LFLSKVKRELKLPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDIKWLGVRPSDL 346
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+K+ IP+ CR ++ DI L++ F++ N W KE++ M K KAEI+AL
Sbjct: 347 DKFKIPEQCRLEMTAKDIETGNHMLKED----FIQQNPDWVKEVEIMLKTKTKAEIQALS 402
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
Y ++YL+ YLP K + DW+
Sbjct: 403 SYGFQYLSEVYLPLKLQEGDWI 424
>gi|167526605|ref|XP_001747636.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774082|gb|EDQ87716.1| predicted protein [Monosiga brevicollis MX1]
Length = 407
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 85/141 (60%), Gaps = 4/141 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+R ++ L +LG FD +PYG+ IL+VYM SKNM+ + L P+IKWLGL P+DL+
Sbjct: 271 FVRAVKDALNVPILGLFDSDPYGLKILSVYMSSSKNMSYDSASLTCPDIKWLGLRPTDLD 330
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+Y IP+ CR ++ +DI + L+ F+ N +W KEL+ M KAEI+AL
Sbjct: 331 RYKIPEQCRLPMTAEDIETGRRLLQAD----FITKNEAWVKELRLMLDTKVKAEIQALSN 386
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
+ ++YL YLP K DW+
Sbjct: 387 FGFQYLTEVYLPQKLERGDWI 407
>gi|308803671|ref|XP_003079148.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
gi|116057603|emb|CAL53806.1| topoisomerase 6 subunit A (ISS) [Ostreococcus tauri]
Length = 422
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L +++ LK VL D +PYG+ I++VYM GSKNMA + L P+IKWLG+ PSDL
Sbjct: 285 LFLSKVKRDLKIPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDIKWLGVRPSDL 344
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+K+ IP+ CR +S DI + L + FV+ N W KE+ M + KAEI+AL
Sbjct: 345 DKFKIPEQCRLDMSAKDIETGQHMLNED----FVKQNPEWVKEINIMLETKTKAEIQALS 400
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
Y ++YL YLP K DW+
Sbjct: 401 AYGFQYLTKVYLPLKLAEGDWI 422
>gi|255070111|ref|XP_002507137.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
gi|226522412|gb|ACO68395.1| type II DNA topoisomerase VI subunit A 2 [Micromonas sp. RCC299]
Length = 391
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 87/142 (61%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L +++ L+ VL D +PYG+ I++VYM GSKNMA + L P+IKWLG+ PSDL
Sbjct: 254 LFLSKLKRDLRIPVLALVDADPYGLKIISVYMQGSKNMAFDSANLTTPDIKWLGVRPSDL 313
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+K+ IP+ CR +S+ DI L + F++ N W +E++ M KAEI+AL
Sbjct: 314 DKFKIPEQCRLEMSQKDIETGHHMLNED----FIQQNPKWVREVKMMLASKTKAEIQALS 369
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
Y ++YL+ YLP K + DW+
Sbjct: 370 SYGFQYLSEVYLPLKLQEGDWI 391
>gi|145346380|ref|XP_001417667.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577895|gb|ABO95960.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 339
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L +++ LK VL D +PYG+ I++VYM GSKNMA + L P+IKWLG+ PSDL
Sbjct: 202 LFLSKVKRDLKIPVLALVDADPYGLKIISVYMQGSKNMAFDSGNLTTPDIKWLGVRPSDL 261
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+K+ IP+ CR ++ DI L + F++SN W KE+ M + KAEI++L
Sbjct: 262 DKFKIPEQCRLEMTAKDIETGHHMLNED----FIKSNPEWVKEINIMLETKTKAEIQSLS 317
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
Y ++YL+ YLP K DW+
Sbjct: 318 SYGFQYLSEVYLPLKLLEGDWI 339
>gi|428170369|gb|EKX39295.1| topoisomerase 6 subunit A [Guillardia theta CCMP2712]
Length = 436
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 20/158 (12%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ LR ++ LK +LG FD + +G+ IL+VYM GS+ M+ + LA P+IKWLG+ PSDL
Sbjct: 283 MFLRRVKDALKIPILGLFDSDAHGLKILSVYMQGSEAMSHDSANLATPDIKWLGVRPSDL 342
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEI---- 168
+KYN+P+ CR L+ D+S ++ EK +++ ++W KEL+ + EKAEI
Sbjct: 343 DKYNVPRECRLELTTHDVSFAESLKEK----PYIQKRSAWVKELETLLSRKEKAEIRMIF 398
Query: 169 ------------EALDMYEYKYLANKYLPSKFRAEDWL 194
EA ++YL +YLP K R DW+
Sbjct: 399 LLCFGGIYLVCAEAFTSKGFQYLTQEYLPRKLREGDWV 436
>gi|159487423|ref|XP_001701722.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158280941|gb|EDP06697.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 414
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 92/143 (64%), Gaps = 5/143 (3%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMF-GSKNMAGRNLRLAVPNIKWLGLFPSD 111
+ L++++ LK VL D +PYG+ IL+V++ GS NM+ + L P+IKWLG+ PSD
Sbjct: 276 LFLKKLKSSLKIPVLALVDSDPYGLKILSVFVLSGSMNMSYDSSNLTTPDIKWLGVRPSD 335
Query: 112 LEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
L++++IP+ CR ++++DI K LE+ +++SN W +EL+ M KAEI+AL
Sbjct: 336 LDRFDIPQQCRLPMTEEDIKTGKRLLEED----WIKSNPEWVRELELMLASKVKAEIQAL 391
Query: 172 DMYEYKYLANKYLPSKFRAEDWL 194
+ ++YL+ YLP K + DW+
Sbjct: 392 SSFGFQYLSQVYLPLKLQEGDWI 414
>gi|345292731|gb|AEN82857.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292733|gb|AEN82858.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292735|gb|AEN82859.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292737|gb|AEN82860.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292739|gb|AEN82861.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292741|gb|AEN82862.1| AT5G02820-like protein, partial [Capsella rubella]
gi|345292743|gb|AEN82863.1| AT5G02820-like protein, partial [Capsella rubella]
Length = 202
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A + + + N F I + +G + + LR+++ +L
Sbjct: 43 DMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLRKMKMEL 98
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 99 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 158
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEA 170
+++ DI K LE+ FV+ N W +EL M K +KAEI+A
Sbjct: 159 LPMTEQDIKTGKDMLEED----FVKKNPGWVEELNLMVKTKQKAEIQA 202
>gi|449470533|ref|XP_004152971.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 6/139 (4%)
Query: 56 REIRCKLKKSVLGSF---DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
R +R + S L +F DC+PYG ILT Y FGS MA L +P ++WLG F SD
Sbjct: 63 RFLRLLVDVSALPAFCLVDCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDF 122
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
EKYN+P+ C L+ D S+ + L++ L R W EL+ M + G K EIEAL
Sbjct: 123 EKYNLPEQCLIPLTFKDKSRTEALLQRCYL---RREVQHWRLELESMLERGVKFEIEALS 179
Query: 173 MYEYKYLANKYLPSKFRAE 191
++ +L+++YLPSK +E
Sbjct: 180 VHNISFLSDEYLPSKIESE 198
>gi|388556219|dbj|BAM16279.1| Spo11 [Anguilla japonica]
Length = 385
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+++R++ L + D +P+GI I+ +Y +GS +M+ L VP++ WLGL PSD+
Sbjct: 248 LMVRKLWDTLHVPIFALVDADPHGIEIMCIYKYGSVSMSFEAQNLTVPSVMWLGLLPSDI 307
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
E+ +PK SK D SKL + L + +V +WEKE++KM K+ +KAEI++L
Sbjct: 308 ERLRLPKDVLIPFSKKDESKLTSLLRR----PYVVCQPAWEKEMEKMLKQRQKAEIQSLT 363
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L + YLP+K R W+
Sbjct: 364 SLAPDFLTSVYLPNKLRYGGWI 385
>gi|89511867|dbj|BAE86870.1| Spo11 [Anguilla japonica]
Length = 385
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+++R++ L + D +P+GI I+ +Y +GS +M+ L VP++ WLGL PSD+
Sbjct: 248 LMVRKLWDTLHVPIFALVDADPHGIEIMCIYKYGSVSMSFEAQNLTVPSVMWLGLLPSDI 307
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
E+ +PK SK D SKL + L + +V +WEKE++KM K+ +KAEI++L
Sbjct: 308 ERLRLPKDVLIPFSKKDESKLTSLLRR----PYVVCQPAWEKEMEKMLKQRQKAEIQSLT 363
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L + YLP+K R W+
Sbjct: 364 SLAPDFLTSVYLPNKLRYGGWI 385
>gi|449470576|ref|XP_004152992.1| PREDICTED: meiotic recombination protein SPO11-1-like, partial
[Cucumis sativus]
Length = 187
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYG ILT Y FGS MA L +P ++WLG F SD EKYN+P+ C L+ D
Sbjct: 64 DCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKDK 123
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
S+ + L++ L R W EL+ M + G K EIEAL ++ +L+++YLPSK +
Sbjct: 124 SRTEALLQRCYL---RREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKIES 180
Query: 191 E 191
E
Sbjct: 181 E 181
>gi|449464882|ref|XP_004150158.1| PREDICTED: meiotic recombination protein SPO11-1-like [Cucumis
sativus]
Length = 204
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYG ILT Y FGS MA L +P ++WLG F SD EKYN+P+ C L+ D
Sbjct: 81 DCDPYGFDILTTYRFGSMQMAYDAKYLKIPQLRWLGAFASDFEKYNLPEQCLIPLTFKDK 140
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
S+ + L++ L R W EL+ M + G K EIEAL ++ +L+++YLPSK +
Sbjct: 141 SRTEALLQRCYL---RREVQHWRLELESMLERGVKFEIEALSVHNISFLSDEYLPSKIES 197
Query: 191 E 191
E
Sbjct: 198 E 198
>gi|148674664|gb|EDL06611.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_a [Mus musculus]
Length = 353
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 234 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 293
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 294 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 349
Query: 191 EDWL 194
W+
Sbjct: 350 GGWI 353
>gi|395829244|ref|XP_003787770.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Otolemur
garnettii]
Length = 396
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++++ + V D +PYGI I+ +Y +GS +M+ L VP I+WLGL PSDL
Sbjct: 259 LLVKKLWDTFRTPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDL 318
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ NIPK L+K D KL + L++ +V W KE++ M+ KAEI+AL
Sbjct: 319 KRLNIPKDSLIPLTKRDQMKLDSILQR----PYVTCQPFWRKEMEIMADSKMKAEIQALT 374
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K R W+
Sbjct: 375 FLSSDYLSRVYLPNKLRFGGWI 396
>gi|148674668|gb|EDL06615.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_e [Mus musculus]
Length = 327
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 208 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 267
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 268 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 323
Query: 191 EDWL 194
W+
Sbjct: 324 GGWI 327
>gi|395829242|ref|XP_003787769.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Otolemur
garnettii]
Length = 358
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++++ + V D +PYGI I+ +Y +GS +M+ L VP I+WLGL PSDL
Sbjct: 221 LLVKKLWDTFRTPVFTLVDADPYGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDL 280
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ NIPK L+K D KL + L++ +V W KE++ M+ KAEI+AL
Sbjct: 281 KRLNIPKDSLIPLTKRDQMKLDSILQR----PYVTCQPFWRKEMEIMADSKMKAEIQALT 336
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K R W+
Sbjct: 337 FLSSDYLSRVYLPNKLRFGGWI 358
>gi|6755624|ref|NP_036176.1| meiotic recombination protein SPO11 isoform a [Mus musculus]
gi|30179896|sp|Q9WTK8.2|SPO11_MOUSE RecName: Full=Meiotic recombination protein SPO11
gi|5815133|gb|AAD52563.1|AF169386_1 SPO11 [Mus musculus]
gi|9367101|gb|AAF87096.1|AF173848_1 SPO11 protein [Mus musculus]
gi|162318682|gb|AAI56814.1| Sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) [synthetic construct]
Length = 396
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 277 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 337 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|148674666|gb|EDL06613.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_c [Mus musculus]
Length = 306
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 187 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 246
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 247 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 302
Query: 191 EDWL 194
W+
Sbjct: 303 GGWI 306
>gi|145312272|ref|NP_001077428.1| meiotic recombination protein SPO11 isoform c [Mus musculus]
gi|5733397|gb|AAD49561.1|AF126400_1 SPO11 protein [Mus musculus]
gi|9367040|gb|AAF87094.1|AF167439_1 SPO11b [Mus musculus]
Length = 371
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 252 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 311
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 312 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 367
Query: 191 EDWL 194
W+
Sbjct: 368 GGWI 371
>gi|148674665|gb|EDL06612.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae), isoform CRA_b [Mus musculus]
Length = 310
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 191 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 250
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 251 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 306
Query: 191 EDWL 194
W+
Sbjct: 307 GGWI 310
>gi|5453474|gb|AAD43589.1|AF163054_1 meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
gi|5453483|gb|AAD43592.1| meiotic DNA transesterase/topoisomerase homolog variant B [Mus
musculus]
Length = 354
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 235 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 294
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 295 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 350
Query: 191 EDWL 194
W+
Sbjct: 351 GGWI 354
>gi|354478583|ref|XP_003501494.1| PREDICTED: meiotic recombination protein SPO11 [Cricetulus griseus]
Length = 361
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI IL VY +GS +M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 242 DADPHGIEILCVYKYGSMSMSFEAHSLTVPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 301
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KEL+ M+ KAEI+AL YL+ YLP+K R
Sbjct: 302 RKLDSILKR----PYITYQPLWRKELEMMADSKMKAEIQALTFLSADYLSRVYLPNKLRF 357
Query: 191 EDWL 194
W+
Sbjct: 358 GGWI 361
>gi|145312248|ref|NP_001077429.1| meiotic recombination protein SPO11 isoform b [Mus musculus]
gi|5453472|gb|AAD43588.1|AF163053_1 meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
gi|5532652|gb|AAD44811.1|AF149309_1 Spo11 homolog [Mus musculus]
gi|9367033|gb|AAF87090.1|AF165313_1 SPO11 [Mus musculus]
gi|5453482|gb|AAD43591.1| meiotic DNA transesterase/topoisomerase homolog variant A [Mus
musculus]
Length = 358
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L +P I+WLGL PSD+++ NIPK L+K D
Sbjct: 239 DADPYGIEIMCIYKYGSMSMSFEAHNLTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KEL+ M+ KAEI+AL + YL+ YLP+K R
Sbjct: 299 MKLDSILKR----PYITYQPLWKKELEMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|295830619|gb|ADG38978.1| AT5G02820-like protein [Capsella grandiflora]
Length = 199
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 8/163 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ ++L + A + + + N F I + +G + + LR+++ +L
Sbjct: 45 DMQSDAMVILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLRKMKMEL 100
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 101 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 160
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+++ DI K LE+ FV+ N W +EL M K +K
Sbjct: 161 LPMTEQDIKTGKDMLEED----FVKKNPGWVEELNLMVKTKQK 199
>gi|10172604|dbj|BAB01408.1| DNA topoisomerase VI, subunit A [Arabidopsis thaliana]
Length = 357
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + KL V DC+PYG IL Y FGS MA L P++KWLG FPSD E
Sbjct: 219 FLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSE 278
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++PK C L+++D + + L + L R W EL+ M K G K EIEAL +
Sbjct: 279 VYSVPKQCLLPLTEEDKKRTEAMLLRCYL---KREMPQWRLELETMLKRGVKFEIEALSV 335
Query: 174 YEYKYLANKYLPSKFRAE 191
+ +L+ Y+PSK R E
Sbjct: 336 HSLSFLSEVYIPSKIRRE 353
>gi|357494925|ref|XP_003617751.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
gi|355519086|gb|AET00710.1| Meiotic recombination protein SPO11-1 [Medicago truncatula]
Length = 439
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYG ILT Y FGS MA L VP I WLG FPSD ++Y +PK C L+ +D
Sbjct: 319 DCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIHWLGAFPSDSDRYFVPKQCLLPLTVEDK 378
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+K L + L R W EL+ M ++G K EIEAL ++ +L Y+PSK
Sbjct: 379 RKIKAMLLRCYL---QREVPEWRLELRMMLQKGVKFEIEALSVHTLSFLTESYIPSKIHG 435
Query: 191 E 191
+
Sbjct: 436 K 436
>gi|15231162|ref|NP_187923.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
gi|75335900|sp|Q9M4A2.1|SPO11_ARATH RecName: Full=Meiotic recombination protein SPO11-1;
Short=AtSPO11-1
gi|7270975|emb|CAB81544.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|114050705|gb|ABI49502.1| At3g13170 [Arabidopsis thaliana]
gi|332641783|gb|AEE75304.1| meiotic recombination protein SPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + KL V DC+PYG IL Y FGS MA L P++KWLG FPSD E
Sbjct: 224 FLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSE 283
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++PK C L+++D + + L + L R W EL+ M K G K EIEAL +
Sbjct: 284 VYSVPKQCLLPLTEEDKKRTEAMLLRCYL---KREMPQWRLELETMLKRGVKFEIEALSV 340
Query: 174 YEYKYLANKYLPSKFRAE 191
+ +L+ Y+PSK R E
Sbjct: 341 HSLSFLSEVYIPSKIRRE 358
>gi|302808592|ref|XP_002985990.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
gi|300146138|gb|EFJ12809.1| hypothetical protein SELMODRAFT_123469 [Selaginella moellendorffii]
Length = 278
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + + K V G D +PYG+ IL Y FGS MA LA P+I+WLG+F SD +
Sbjct: 140 FLRLLAAETKLPVYGLVDADPYGLDILATYRFGSPTMAYDAEALATPSIRWLGVFLSDCQ 199
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDL--VAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+N+P C L+ DD K + L + L +AF SW ++L+ M ++G K E+EAL
Sbjct: 200 THNVPDRCLLSLTNDDRRKAEAMLNRDYLKHLAF-----SWNQQLRLMLEKGVKLELEAL 254
Query: 172 DMYEYKYLANKYLPSKFRAEDWL 194
++ LA+ Y+P K +A +L
Sbjct: 255 SASKFSALADDYIPHKIKAAAYL 277
>gi|13383478|gb|AAK21002.1| AtSPO11-1 [Arabidopsis thaliana]
Length = 362
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + KL V DC+PYG IL Y FGS MA L P++KWLG FPSD E
Sbjct: 224 FLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSE 283
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++PK C L+++D + + L + L R W EL+ M K G K EIEAL +
Sbjct: 284 VYSVPKQCLLPLTEEDKKRTEAMLLRCYL---KREMPQWRLELETMLKRGVKFEIEALSV 340
Query: 174 YEYKYLANKYLPSKFRAE 191
+ +L+ Y+PSK R E
Sbjct: 341 HSLSFLSEIYIPSKIRRE 358
>gi|297834134|ref|XP_002884949.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330789|gb|EFH61208.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 362
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + KL V DC+PYG IL Y FGS MA L P++KWLG FPSD E
Sbjct: 224 FLRLLMEKLHLPVHCLVDCDPYGFEILATYRFGSMQMAYDIESLRAPDMKWLGAFPSDSE 283
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++PK C L+++D + + L + L R W EL+ M K G K EIEAL +
Sbjct: 284 IYSVPKQCLLPLTEEDKKRTEALLLRCYL---KREMPRWRLELETMLKRGVKFEIEALSV 340
Query: 174 YEYKYLANKYLPSKFRAE 191
+ +L+ Y+PSK R E
Sbjct: 341 HSLSFLSEVYIPSKIRRE 358
>gi|327278047|ref|XP_003223774.1| PREDICTED: meiotic recombination protein SPO11-like [Anolis
carolinensis]
Length = 391
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+LL+++ + D +P+GI I+ +Y +GS +M+ L VP ++WLG+ PSD
Sbjct: 254 LLLKKLWDTCHVPIFALMDADPHGIEIMCIYKYGSMSMSFEAPNLTVPAVRWLGILPSDF 313
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
E+ NIPK LSK D SKL + + F+ ++W+ EL M KAEI+AL+
Sbjct: 314 ERLNIPKTALIPLSKKDQSKLASL----QMRPFIAYQSTWKNELDIMETCQMKAEIQALN 369
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ YL+ YLP+K + W+
Sbjct: 370 SFSSDYLSRVYLPNKLQFGGWI 391
>gi|295830615|gb|ADG38976.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830617|gb|ADG38977.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830621|gb|ADG38979.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830623|gb|ADG38980.1| AT5G02820-like protein [Capsella grandiflora]
gi|295830625|gb|ADG38981.1| AT5G02820-like protein [Neslia paniculata]
Length = 199
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A + + + N F I + +G + + LR+++ +L
Sbjct: 45 DMQSDAMFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLRKMKMEL 100
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 101 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCR 160
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+++ DI K LE+ FV+ N W +EL M K +K
Sbjct: 161 LPMTEQDIKTGKDMLEED----FVKKNPGWVEELNLMVKTKQK 199
>gi|224061220|ref|XP_002300376.1| predicted protein [Populus trichocarpa]
gi|222847634|gb|EEE85181.1| predicted protein [Populus trichocarpa]
Length = 365
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYG ILT Y FGS MA L VP ++WLG FPSD EKY++P+ C L+ +D
Sbjct: 238 DCDPYGFDILTTYRFGSMQMAYDAKILRVPEVQWLGAFPSDFEKYDLPQQCLLPLTAEDK 297
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
+ +T L + L V W EL+ M ++G K EIEA ++ +L+ +Y+PSK
Sbjct: 298 RRTETMLLRCYLQKEV---PEWRLELELMLQKGVKFEIEAFSVHTLSFLSEQYIPSK 351
>gi|356499439|ref|XP_003518548.1| PREDICTED: meiotic recombination protein SPO11-1-like [Glycine max]
Length = 367
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYG ILT Y FGS MA L VP I+WLG FPSD E+Y +P C L+ +D
Sbjct: 247 DCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAFPSDSERYFVPNQCLLPLTAEDK 306
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K++ L + L R W ELQ + + G K EIEAL ++ +L+ Y+PSK
Sbjct: 307 RKVEAMLLRCYL---EREVPQWRLELQLILQRGVKFEIEALSVHALSFLSESYIPSKIEG 363
Query: 191 E 191
+
Sbjct: 364 K 364
>gi|156392691|ref|XP_001636181.1| predicted protein [Nematostella vectensis]
gi|156223282|gb|EDO44118.1| predicted protein [Nematostella vectensis]
Length = 405
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 84/141 (59%), Gaps = 4/141 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
++ + C L V+ D +P+GI IL+VY +GSK ++ L VP I+WLG++PS+++
Sbjct: 269 MVHRLWCTLHVPVMALVDADPHGIEILSVYKYGSKALSFNVHDLTVPTIRWLGVWPSEVD 328
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+ +IP+ R L++ D SK L++ F+ S+ +W +E++ M +G KAE++AL
Sbjct: 329 RLSIPEHVRIPLTERDRSKCHALLKR----PFMDSHPAWRQEIEHMLTKGYKAEMQALST 384
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
+L++ Y+ K R W+
Sbjct: 385 IATSFLSDTYIALKIRNGRWI 405
>gi|395509925|ref|XP_003759237.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Sarcophilus harrisii]
Length = 393
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+E+ NIP+ L+K D
Sbjct: 274 DADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRGTLIPLTKRDQ 333
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ S W+KE++ M++ KAEI+AL YL+ YLP+K +
Sbjct: 334 MKLDSILKR----PYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQF 389
Query: 191 EDWL 194
W+
Sbjct: 390 GGWI 393
>gi|157818345|ref|NP_001102434.1| meiotic recombination protein SPO11 [Rattus norvegicus]
gi|149030040|gb|EDL85132.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 331
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L++ D
Sbjct: 212 DADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQ 271
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + ++ + W+KE++ ++ KAEI+AL YL+ YLP+K R
Sbjct: 272 MKLDSILRR----PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLRF 327
Query: 191 EDWL 194
W+
Sbjct: 328 GGWI 331
>gi|149030041|gb|EDL85133.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 321
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L++ D
Sbjct: 202 DADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQ 261
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + ++ + W+KE++ ++ KAEI+AL YL+ YLP+K R
Sbjct: 262 MKLDSILRR----PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLRF 317
Query: 191 EDWL 194
W+
Sbjct: 318 GGWI 321
>gi|149030043|gb|EDL85135.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_d [Rattus
norvegicus]
Length = 306
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L++ D
Sbjct: 187 DADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQ 246
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + ++ + W+KE++ ++ KAEI+AL YL+ YLP+K R
Sbjct: 247 MKLDSILRR----PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLRF 302
Query: 191 EDWL 194
W+
Sbjct: 303 GGWI 306
>gi|302808746|ref|XP_002986067.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
gi|300146215|gb|EFJ12886.1| hypothetical protein SELMODRAFT_123390 [Selaginella moellendorffii]
Length = 278
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 7/143 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + + V G D +PYG+ IL Y FGS MA LA P+I+WLG+F SD +
Sbjct: 140 FLRLLAAETNLPVYGLVDADPYGLDILATYRFGSPTMAYDAEALATPSIRWLGVFLSDCQ 199
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDL--VAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+N+P C L+ DD K + L + L +AF SW ++L+ M ++G K E+EAL
Sbjct: 200 THNVPDRCLLSLTNDDRRKAEAMLNRDYLKHLAF-----SWNQQLRLMLEKGVKLELEAL 254
Query: 172 DMYEYKYLANKYLPSKFRAEDWL 194
++ LA+ Y+P K +A +L
Sbjct: 255 SASKFSALADDYIPHKIKAAAYL 277
>gi|395509923|ref|XP_003759236.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Sarcophilus harrisii]
Length = 355
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+E+ NIP+ L+K D
Sbjct: 236 DADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIERLNIPRGTLIPLTKRDQ 295
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ S W+KE++ M++ KAEI+AL YL+ YLP+K +
Sbjct: 296 MKLDSILKR----PYITSQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQF 351
Query: 191 EDWL 194
W+
Sbjct: 352 GGWI 355
>gi|149030042|gb|EDL85134.1| sporulation protein, meiosis-specific, SPO11 homolog (S.
cerevisiae) (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 316
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L++ D
Sbjct: 197 DADPYGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNIPKDSLIPLTRRDQ 256
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + ++ + W+KE++ ++ KAEI+AL YL+ YLP+K R
Sbjct: 257 MKLDSILRR----PYITYHPFWKKEMEMLADSKTKAEIQALSFLSSDYLSRVYLPNKLRF 312
Query: 191 EDWL 194
W+
Sbjct: 313 GGWI 316
>gi|410899931|ref|XP_003963450.1| PREDICTED: meiotic recombination protein SPO11-like [Takifugu
rubripes]
Length = 364
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+++R++ L + D +P+GI I+++Y +GS M+ L VP++ WLGL PSDL
Sbjct: 227 LMVRKLWDTLHIPIFALVDADPHGIEIMSIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDL 286
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ +P+ L+K D KL + L++ ++ S W++E++ M + KAEI++L
Sbjct: 287 QRLRVPQDVLLPLTKRDECKLASLLKR----PYLSSQPQWKREMELMQQTQVKAEIQSLS 342
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L N YLP+K R + W+
Sbjct: 343 AIAPDFLTNIYLPNKLRYKGWI 364
>gi|403282455|ref|XP_003932664.1| PREDICTED: meiotic recombination protein SPO11 [Saimiri boliviensis
boliviensis]
Length = 358
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +MA L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 239 DADPHGIEIMFIYKYGSMSMAFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKSDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|348502949|ref|XP_003439029.1| PREDICTED: meiotic recombination protein SPO11-like [Oreochromis
niloticus]
Length = 390
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
++++ + +L + D +P+GI I+ +Y +GS M+ L VP++ WLGL PSDL
Sbjct: 253 LMVKRLWDELHIPIFALVDADPHGIEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDL 312
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ +PK L+K D SKL + LE+ ++ S WEKE++ M + KAEI++L
Sbjct: 313 QRLRVPKDALIPLTKRDESKLCSLLER----PYLTSQPEWEKEMKLMQQNKVKAEIQSLT 368
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L YLP+K R W+
Sbjct: 369 AIAPDFLTQIYLPNKLRYGGWI 390
>gi|225461890|ref|XP_002264649.1| PREDICTED: meiotic recombination protein SPO11-1-like [Vitis
vinifera]
Length = 361
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
KL V DC+PYG ILT Y FGS MA L VP I+WLG FPSD EKY +P+
Sbjct: 231 KLHLHVYCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRVPEIEWLGAFPSDSEKYGLPEP 290
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
C L+ +D K + L + L + W EL+ M + G K EIEAL ++ +L+
Sbjct: 291 CLLPLTAEDKRKTEAILHRCYLQQEL---LHWRLELELMLQRGVKFEIEALSVHSLSFLS 347
Query: 181 NKYLPSKFRAED 192
Y+PSK + +
Sbjct: 348 ENYIPSKIQVAE 359
>gi|302800231|ref|XP_002981873.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
gi|300150315|gb|EFJ16966.1| hypothetical protein SELMODRAFT_115310 [Selaginella moellendorffii]
Length = 284
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 55 LREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEK 114
LR + + V G D +PYG+ IL Y FGS MA LA P+I+WLG+F SD +
Sbjct: 147 LRLLAAETNLPVYGLVDADPYGLDILATYRFGSLTMAYDAEALATPSIRWLGVFLSDCQT 206
Query: 115 YNIPKLCRQILSKDDISKLKTFLEKGDL--VAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+N+P C L+ DD K + L + L +AF SW ++L+ M ++G K E+EAL
Sbjct: 207 HNVPDRCLLPLTNDDRRKAEAMLNRDYLEHLAF-----SWNQQLRLMLEKGVKLELEALS 261
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
++ LA+ Y+P K +A +L
Sbjct: 262 ASKFSALADDYIPHKIKAAAYL 283
>gi|348555758|ref|XP_003463690.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Cavia porcellus]
Length = 396
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L+R + VL D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+
Sbjct: 259 LLVRRLWELFHVPVLTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDI 318
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ NIPK L+K D KL + L++ +V W KE++ M+ KAEI+AL+
Sbjct: 319 KRLNIPKDSLIPLTKWDQMKLDSILKR----PYVTGQPFWRKEMELMADSKMKAEIQALN 374
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K + W+
Sbjct: 375 SLSSDYLSRVYLPNKLKFGGWI 396
>gi|348555760|ref|XP_003463691.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Cavia porcellus]
Length = 358
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L+R + VL D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+
Sbjct: 221 LLVRRLWELFHVPVLTLVDADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDI 280
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ NIPK L+K D KL + L++ +V W KE++ M+ KAEI+AL+
Sbjct: 281 KRLNIPKDSLIPLTKWDQMKLDSILKR----PYVTGQPFWRKEMELMADSKMKAEIQALN 336
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K + W+
Sbjct: 337 SLSSDYLSRVYLPNKLKFGGWI 358
>gi|296200791|ref|XP_002747753.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Callithrix jacchus]
Length = 396
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|296200789|ref|XP_002747752.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Callithrix jacchus]
Length = 358
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 239 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|296089901|emb|CBI39720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
KL V DC+PYG ILT Y FGS MA L VP I+WLG FPSD EKY +P+
Sbjct: 285 KLHLHVYCLVDCDPYGFDILTTYRFGSMQMAYDAKFLRVPEIEWLGAFPSDSEKYGLPEP 344
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
C L+ +D K + L + L + W EL+ M + G K EIEAL ++ +L+
Sbjct: 345 CLLPLTAEDKRKTEAILHRCYLQQEL---LHWRLELELMLQRGVKFEIEALSVHSLSFLS 401
Query: 181 NKYLPSKFRAED 192
Y+PSK + +
Sbjct: 402 ENYIPSKIQVAE 413
>gi|6912680|ref|NP_036576.1| meiotic recombination protein SPO11 isoform a [Homo sapiens]
gi|7674367|sp|Q9Y5K1.1|SPO11_HUMAN RecName: Full=Meiotic recombination protein SPO11; AltName:
Full=Cancer/testis antigen 35; Short=CT35
gi|5532654|gb|AAD44812.1|AF149310_1 Spo11 homolog [Homo sapiens]
gi|5815131|gb|AAD52562.1|AF169385_1 SPO11 [Homo sapiens]
gi|61354156|gb|AAX44047.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Homo sapiens]
gi|119595933|gb|EAW75527.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 396
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|332207876|ref|XP_003253022.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein SPO11
[Nomascus leucogenys]
Length = 420
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 301 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 360
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 361 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 416
Query: 191 EDWL 194
W+
Sbjct: 417 GGWI 420
>gi|426392234|ref|XP_004062461.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Gorilla
gorilla gorilla]
Length = 358
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 239 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|114682755|ref|XP_001170101.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
troglodytes]
gi|397469112|ref|XP_003806208.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
paniscus]
Length = 358
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 239 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|38201680|ref|NP_937998.1| meiotic recombination protein SPO11 isoform b [Homo sapiens]
gi|21706947|gb|AAH33591.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Homo sapiens]
gi|119595932|gb|EAW75526.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 358
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 239 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|114682753|ref|XP_514741.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Pan
troglodytes]
gi|397469110|ref|XP_003806207.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Pan
paniscus]
Length = 396
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|426392232|ref|XP_004062460.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Gorilla
gorilla gorilla]
Length = 396
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|390348826|ref|XP_780029.3| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Strongylocentrotus purpuratus]
Length = 402
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+++R++ L V D +P+G+ IL VY FGS++++ + L VP+I+WLG+ PSD+
Sbjct: 265 MMVRKLWDTLHIPVFALVDADPHGLAILFVYKFGSRSLSYESHSLTVPSIRWLGVLPSDV 324
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+ IP+ LS D+ K + + F + W ELQ+M G KAEI++L
Sbjct: 325 KGLRIPEKALVPLSPSDLKKASHLMRR----PFYKELPQWMSELQEMLHSGYKAEIQSLT 380
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L + YLP+K R WL
Sbjct: 381 AISETFLTDVYLPTKLRCGGWL 402
>gi|149734130|ref|XP_001490003.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Equus
caballus]
Length = 357
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 238 DADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDALIPLTKRDQ 297
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W +E++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 298 MKLDSILKR----PYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRVYLPNKLKF 353
Query: 191 EDWL 194
W+
Sbjct: 354 GGWI 357
>gi|149734128|ref|XP_001489976.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Equus
caballus]
Length = 395
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 276 DADPHGIEIMCIYKYGSMSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKDALIPLTKRDQ 335
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W +E++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 336 MKLDSILKR----PYVTCQPFWRREMEIMANSKMKAEIQALTFLSSDYLSRVYLPNKLKF 391
Query: 191 EDWL 194
W+
Sbjct: 392 GGWI 395
>gi|344296531|ref|XP_003419960.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Loxodonta
africana]
Length = 396
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKNTLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILKR----PYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|157427754|ref|NP_001098783.1| meiotic recombination protein SPO11 [Sus scrofa]
gi|147223336|emb|CAN13250.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 357
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 238 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQ 297
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 298 MKLDSILKR----PYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 353
Query: 191 EDWL 194
W+
Sbjct: 354 GGWI 357
>gi|147223337|emb|CAN13251.1| SPO11 meiotic protein covalently bound to DSB-like (S. cerevisiae)
[Sus scrofa]
Length = 395
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 276 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQ 335
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 336 MKLDSILKR----PYVACQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 391
Query: 191 EDWL 194
W+
Sbjct: 392 GGWI 395
>gi|344296529|ref|XP_003419959.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Loxodonta
africana]
Length = 358
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 239 DADPHGIEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKNTLIPLTKRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILKR----PYITCQPFWRKEMEVMADSKMKAEIQALTFISSDYLSKVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|73992352|ref|XP_853487.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Canis
lupus familiaris]
Length = 396
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
V D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIP+ L
Sbjct: 272 VFALVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPL 331
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+K D KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP
Sbjct: 332 TKRDQMKLDSVLKR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLP 387
Query: 186 SKFRAEDWL 194
+K + W+
Sbjct: 388 NKLKFGGWI 396
>gi|402882175|ref|XP_003904626.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Papio
anubis]
Length = 396
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+ D
Sbjct: 277 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILRR----PYVTRQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|320168151|gb|EFW45050.1| topoisomerase [Capsaspora owczarzaki ATCC 30864]
Length = 406
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 17/142 (11%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ L ++ +L +LG D +PYG+ IL+VY+ GSKNM+ + L +IKWLG
Sbjct: 282 LFLNMVKTRLNIPILGLVDSDPYGLKILSVYLSGSKNMSYDSASLTTSDIKWLG------ 335
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
CR +++ DI + L++ F+++N +W EL+ M K EKAEI+AL
Sbjct: 336 -------ECRLDMTESDIKYGQDLLKED----FIKNNPAWMAELELMLKTKEKAEIQALS 384
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ ++YL YLP K + DW+
Sbjct: 385 NFGFQYLTQTYLPLKLQQGDWI 406
>gi|402882177|ref|XP_003904627.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Papio
anubis]
Length = 358
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+ D
Sbjct: 239 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILRR----PYVTRQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|351697823|gb|EHB00742.1| Meiotic recombination protein SPO11 [Heterocephalus glaber]
Length = 396
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP ++WLGL PSD+ + NIPK L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSMSMSFEAHNLTVPAVRWLGLLPSDINRLNIPKDSLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILKR----PYVTCQPFWRKEMEMMADSRMKAEIQALTSLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|345790222|ref|XP_867449.2| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Canis
lupus familiaris]
Length = 358
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
V D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIP+ L
Sbjct: 234 VFALVDADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPL 293
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+K D KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP
Sbjct: 294 TKRDQMKLDSVLKR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLP 349
Query: 186 SKFRAEDWL 194
+K + W+
Sbjct: 350 NKLKFGGWI 358
>gi|109091516|ref|XP_001088572.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Macaca
mulatta]
Length = 396
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+ D
Sbjct: 277 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|300796909|ref|NP_001180019.1| meiotic recombination protein SPO11 [Bos taurus]
gi|296480908|tpg|DAA23023.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
2 [Bos taurus]
Length = 395
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 276 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQ 335
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 336 MKLDSILKR----PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 391
Query: 191 EDWL 194
W+
Sbjct: 392 GGWI 395
>gi|355563008|gb|EHH19570.1| hypothetical protein EGK_02264 [Macaca mulatta]
gi|355784368|gb|EHH65219.1| hypothetical protein EGM_01949 [Macaca fascicularis]
Length = 407
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+ D
Sbjct: 288 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQ 347
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 348 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 403
Query: 191 EDWL 194
W+
Sbjct: 404 GGWI 407
>gi|109091518|ref|XP_001088459.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Macaca
mulatta]
Length = 358
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+ D
Sbjct: 239 DADPHGIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTNRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L + +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|426241227|ref|XP_004014493.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Ovis
aries]
Length = 395
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 276 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQ 335
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 336 MKLDSILKR----PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 391
Query: 191 EDWL 194
W+
Sbjct: 392 GGWI 395
>gi|301759481|ref|XP_002915573.1| PREDICTED: meiotic recombination protein SPO11-like isoform 2
[Ailuropoda melanoleuca]
gi|281348445|gb|EFB24029.1| hypothetical protein PANDA_003591 [Ailuropoda melanoleuca]
Length = 396
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIP+ L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSVLKR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|426241229|ref|XP_004014494.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Ovis
aries]
Length = 357
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 238 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQ 297
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 298 MKLDSILKR----PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 353
Query: 191 EDWL 194
W+
Sbjct: 354 GGWI 357
>gi|334312518|ref|XP_003339751.1| PREDICTED: meiotic recombination protein SPO11 isoform 2
[Monodelphis domestica]
Length = 355
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+++ N+P+ L+K D
Sbjct: 236 DADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRGTLIPLTKQDQ 295
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KE++ M++ KAEI+AL YL+ YLP+K +
Sbjct: 296 MKLDSILKR----PYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQF 351
Query: 191 EDWL 194
W+
Sbjct: 352 GGWI 355
>gi|440912496|gb|ELR62058.1| Meiotic recombination protein SPO11 [Bos grunniens mutus]
Length = 408
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 289 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQ 348
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 349 MKLDSILKR----PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 404
Query: 191 EDWL 194
W+
Sbjct: 405 GGWI 408
>gi|449486470|ref|XP_002195778.2| PREDICTED: meiotic recombination protein SPO11 [Taeniopygia
guttata]
Length = 407
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L+R++ + V D +P+G+ I+ VY +GS +M+ L VP++KWLGL PSDL
Sbjct: 270 LLVRKLWDSFQIPVFTLMDADPHGVEIMCVYKYGSASMSFEAHHLTVPSVKWLGLLPSDL 329
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
E+ NI K +K D +KL + ++ ++ W+KEL+ M+ KAEI+ L
Sbjct: 330 ERLNIRKDALIPFTKQDENKLASIQKR----PYIACQPLWKKELEIMAASKLKAEIQVLT 385
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K + WL
Sbjct: 386 SVSSDYLSRVYLPNKLQFGGWL 407
>gi|301759479|ref|XP_002915572.1| PREDICTED: meiotic recombination protein SPO11-like isoform 1
[Ailuropoda melanoleuca]
Length = 358
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIP+ L+K D
Sbjct: 239 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSVLKR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|296480907|tpg|DAA23022.1| TPA: SPO11 meiotic protein covalently bound to DSB homolog isoform
1 [Bos taurus]
Length = 357
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIPK L+K D
Sbjct: 238 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPKGTLIPLTKRDQ 297
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 298 MKLDSILKR----PYITCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 353
Query: 191 EDWL 194
W+
Sbjct: 354 GGWI 357
>gi|410953484|ref|XP_003983400.1| PREDICTED: meiotic recombination protein SPO11 isoform 1 [Felis
catus]
Length = 396
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIP+ L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 337 MKLDSVLKR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|410953486|ref|XP_003983401.1| PREDICTED: meiotic recombination protein SPO11 isoform 2 [Felis
catus]
Length = 358
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS M+ L VP I+WLGL PSD+++ NIP+ L+K D
Sbjct: 239 DADPHGIEIMCIYKYGSMAMSFEAHNLTVPAIRWLGLLPSDIKRLNIPRDTLIPLTKRDQ 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ +V W KE++ M+ KAEI+AL YL+ YLP+K +
Sbjct: 299 MKLDSVLKR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKF 354
Query: 191 EDWL 194
W+
Sbjct: 355 GGWI 358
>gi|126303194|ref|XP_001377945.1| PREDICTED: meiotic recombination protein SPO11 isoform 1
[Monodelphis domestica]
Length = 393
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+++ N+P+ L+K D
Sbjct: 274 DADPHGIEIMCIYKYGSMSMSFEAHNLTVPTIRWLGLLPSDIKRLNVPRGTLIPLTKQDQ 333
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W+KE++ M++ KAEI+AL YL+ YLP+K +
Sbjct: 334 MKLDSILKR----PYITCQPFWKKEMEIMAELKMKAEIQALTFISSDYLSRVYLPNKLQF 389
Query: 191 EDWL 194
W+
Sbjct: 390 GGWI 393
>gi|198425262|ref|XP_002129892.1| PREDICTED: similar to Spo11 [Ciona intestinalis]
Length = 385
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
IL+R+I +L+ V G D +P+GI I+ VY FGS + + LA+P +KW+G+FPSD+
Sbjct: 248 ILIRKIWNELEIPVFGLMDADPHGIEIMCVYRFGSLSQSHDVHSLALPFMKWIGVFPSDI 307
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+ +P LS D SK + + ++ +A +EL M + KAEI+AL
Sbjct: 308 TRLRLPDDVTLPLSDKDKSKCRDIFAR----PYIEYHARLAEELHNMLRCDRKAEIQALM 363
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ YLA ++PSK + +W+
Sbjct: 364 RFSPNYLAQVFIPSKIKNANWI 385
>gi|255563518|ref|XP_002522761.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223537999|gb|EEF39612.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 373
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 15/132 (11%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYG ILT Y FGS MA L VP I+WLG FPSDLEKY +P+ C L+ +D
Sbjct: 241 DCDPYGFDILTTYRFGSMLMAYDAKFLRVPEIRWLGAFPSDLEKYGLPQHCLLPLTDEDR 300
Query: 131 SKLKTFLEKGDLVAFVRSNASWEK------------ELQKMSKEGEKAEIEALDMYEYKY 178
+ +T L + L R W EL+ M + G K EIEAL ++ +
Sbjct: 301 RRTETMLLRCYL---QREAPEWSYIMKWYYLFHERLELESMLQRGVKFEIEALSVHSLSF 357
Query: 179 LANKYLPSKFRA 190
L+ Y+PSK +
Sbjct: 358 LSELYIPSKIQG 369
>gi|291415677|ref|XP_002724077.1| PREDICTED: meiotic recombination protein SPO11 [Oryctolagus
cuniculus]
Length = 395
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M L VP ++WLGL PSD+ + ++PK L+K D+
Sbjct: 276 DADPHGIEIMCIYKYGSMSMCFEAHHLTVPAVRWLGLLPSDVSRLHVPKDSLIPLTKRDL 335
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
KL + L++ ++ W E++ M+ KA I+AL + YL+ YLP+K ++
Sbjct: 336 MKLDSILKR----PYIACQPLWRAEMEAMASSKVKAGIQALTVLSADYLSRVYLPNKLKS 391
Query: 191 EDWL 194
W+
Sbjct: 392 GGWI 395
>gi|45387775|ref|NP_991245.1| meiotic recombination protein SPO11 [Danio rerio]
gi|41107578|gb|AAH65463.1| SPO11 meiotic protein covalently bound to DSB homolog (S.
cerevisiae) [Danio rerio]
gi|182892100|gb|AAI65825.1| Spo11 protein [Danio rerio]
Length = 383
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+++R++ L V D +P+GI I+ +Y +GS +MA L VP++ WLGL PSD+
Sbjct: 246 LMVRKLWDALHVPVFALVDADPHGIEIMCIYKYGSVSMAFEAHSLTVPSVLWLGLLPSDI 305
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++Y +P+ +K D K+ + + +++ +WE+E++ M KAEI+ L
Sbjct: 306 QRYRVPEEALIPFAKADERKISSLRSR----SYITCQPTWEREVETMQNLKRKAEIQCLA 361
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L YLP+K R W+
Sbjct: 362 SIAPHFLTRVYLPNKLRYGGWI 383
>gi|449274257|gb|EMC83540.1| Meiotic recombination protein SPO11, partial [Columba livia]
Length = 353
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L+R++ + V D +P+G+ I+ +Y +GS +M+ L VP+IKWLGL PSDL
Sbjct: 216 LLVRKLWDAFQIPVFTLMDADPHGVEIMCIYKYGSVSMSFEAHHLTVPSIKWLGLLPSDL 275
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
E+ NI K +K D +KL + ++ ++ W++EL M+ KAEI+ L
Sbjct: 276 ERLNIHKDALIPFTKQDQNKLASIQKR----PYLACQPLWKRELDIMAASKLKAEIQVLT 331
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K + W+
Sbjct: 332 SLSSDYLSRVYLPNKLKFGGWI 353
>gi|432865769|ref|XP_004070604.1| PREDICTED: meiotic recombination protein SPO11 [Oryzias latipes]
Length = 399
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
++++++ L+ + D +P+G I+ +Y +GS M+ L VP++ WLGL PSDL
Sbjct: 262 LMVKKLWDTLQIPIFALVDADPHGFEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDL 321
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ +PK L++ D +KL + L++ + S W+KE++ M + KAEI++L
Sbjct: 322 QRLMVPKRSLLPLTRRDENKLNSLLKR----PYFASQPQWQKEMELMQQSKVKAEIQSLA 377
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L + YLP+K R WL
Sbjct: 378 DIAPDFLTSIYLPNKLRFGGWL 399
>gi|47229338|emb|CAG04090.1| unnamed protein product [Tetraodon nigroviridis]
Length = 350
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+++R++ L + D +P+GI I+ +Y +GS M+ L VP++ WLGL PSDL
Sbjct: 213 LMVRKLWDTLHIPIFALVDADPHGIEIMCIYKYGSVAMSFEAHSLTVPSVMWLGLLPSDL 272
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ +P+ L++ D KL + L++ ++ W +E++ + + KAEI++L
Sbjct: 273 QRLRVPQDVLLPLTRRDECKLASLLKR----PYLTRQPEWRREMELIQQTKVKAEIQSLS 328
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L N YLP+K R + W+
Sbjct: 329 AIAPDFLTNIYLPNKLRYKGWV 350
>gi|241679558|ref|XP_002412658.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
gi|215506460|gb|EEC15954.1| topoisomerase 6 subunit A, putative [Ixodes scapularis]
Length = 264
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LLR + ++ V D +PYGI IL VY +GS MA +AVP I+WLG+ PSD+
Sbjct: 130 LLRRLHVEVDIPVYALVDADPYGIEILCVYAYGSLAMANETDSMAVPRIRWLGVHPSDVV 189
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+ + K C LS D SKL+ L + +V S +W++++ + KAEI+ L
Sbjct: 190 TFEL-KDCPP-LSYGDKSKLRNLLAR----PYVDSKPAWKEQMVLLDGLQRKAEIQGLCS 243
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
+ +L++ Y+PSK + W+
Sbjct: 244 VDPTFLSDVYIPSKIKFSGWI 264
>gi|363741696|ref|XP_001232076.2| PREDICTED: meiotic recombination protein SPO11 [Gallus gallus]
Length = 382
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L+R++ L+ + D +P+G+ I+ +Y +GS +M+ +L VP IKWLGL PSD+
Sbjct: 245 LLVRKLWDTLQIPIFTLMDADPHGVEIMCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDI 304
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ NI K +K D +KL + ++ ++ W+KEL+ M+ KAEI+ L
Sbjct: 305 KRLNIRKDVLIPFTKQDQNKLASLQKR----PYIACQPVWKKELEIMAASKMKAEIQVLT 360
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K + W+
Sbjct: 361 SLSSDYLSRVYLPNKLQFCGWI 382
>gi|345328313|ref|XP_003431261.1| PREDICTED: LOW QUALITY PROTEIN: meiotic recombination protein
SPO11-like [Ornithorhynchus anatinus]
Length = 396
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 4/124 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ +Y +GS +M+ L VP I+WLGL PSD+E+ NIPK L+K D
Sbjct: 277 DADPHGIEIMCIYKYGSLSMSFEAHNLTVPAIRWLGLLPSDIERLNIPKDTLIPLTKHDQ 336
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+KL + ++ ++ W+KE++ M+ KAEI+ L YL+ YL +K +
Sbjct: 337 TKLDSLQKR----PYIDHQPFWKKEMEIMAASRMKAEIQVLTSLAPDYLSRVYLLNKLKF 392
Query: 191 EDWL 194
W+
Sbjct: 393 GGWI 396
>gi|357115345|ref|XP_003559449.1| PREDICTED: meiotic recombination protein SPO11-1-like [Brachypodium
distachyon]
Length = 383
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG IL Y FGS +A L VP I+WLG+F SD E+Y +P C LS +D
Sbjct: 263 DSDPYGFDILATYKFGSMQLAYDANLLRVPGIRWLGVFTSDFEEYCLPDYCLLDLSSEDR 322
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
KL+ L + L R W EL+ M ++G K EIEAL +L+ +Y+P K +
Sbjct: 323 KKLEGILTRCYL---HREAPEWRAELEAMLEKGVKFEIEALSASSISFLSQEYIPQKIK 378
>gi|413933051|gb|AFW67602.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 426
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG IL Y FGS +A L VP+I+WLG+F SD E+Y +P C LS +D
Sbjct: 306 DSDPYGFDILATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDR 365
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
K + L + L R W EL+ M ++G K EIEAL +L+++Y+P K +
Sbjct: 366 RKAEGILARCYL---HREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIK 421
>gi|195644000|gb|ACG41468.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG IL Y FGS +A L VP+I+WLG+F SD E+Y +P C LS +D
Sbjct: 263 DSDPYGFDILATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDR 322
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
K + L + L R W EL+ M ++G K EIEAL +L+++Y+P K +
Sbjct: 323 RKAEGILARCYL---HREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIK 378
>gi|413933054|gb|AFW67605.1| meiotic recombination protein SPO11 [Zea mays]
Length = 383
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG IL Y FGS +A L VP+I+WLG+F SD E+Y +P C LS +D
Sbjct: 263 DSDPYGFDILATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDR 322
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
K + L + L R W EL+ M ++G K EIEAL +L+++Y+P K +
Sbjct: 323 RKAEGILARCYL---HREAPEWRSELEAMLQKGVKFEIEALSANSISFLSHEYIPQKIK 378
>gi|449690981|ref|XP_002162299.2| PREDICTED: meiotic recombination protein SPO11-like [Hydra
magnipapillata]
Length = 348
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+LL +I + V D +P+GI I+ VY FGSK+M+ L P++KWLG+ P D+
Sbjct: 211 MLLNKICKHVSIPVFALVDADPHGIEIMFVYKFGSKSMSYEAEHLTCPSMKWLGILPKDI 270
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
IP LS++D KL + + +V N +++++ + + G KAEIE LD
Sbjct: 271 IGMRIPNRVLIPLSQNDNKKLLDLMNR----PYVLQNKDYKEQINFLHESGLKAEIECLD 326
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ Y+ + YLP K R W+
Sbjct: 327 SISHTYITDIYLPLKLRNGVWI 348
>gi|242038091|ref|XP_002466440.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
gi|241920294|gb|EER93438.1| hypothetical protein SORBIDRAFT_01g007840 [Sorghum bicolor]
Length = 383
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG IL Y FGS +A L VP+I+WLG+F SD E+Y +P C LS +D
Sbjct: 263 DSDPYGFDILATYKFGSLQLAHDANLLRVPDIRWLGVFTSDFEEYCLPDCCLLHLSPEDR 322
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
K + L + L R W EL+ M ++G K EIEAL +L+++Y+P K +
Sbjct: 323 RKAERILARCYL---HREVPEWRSELEAMLQKGVKFEIEALSANSISFLSDEYIPQKIK 378
>gi|297722559|ref|NP_001173643.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|31712057|gb|AAP68363.1| putative topoisomerase 6 [Oryza sativa Japonica Group]
gi|40539002|gb|AAR87259.1| putative DNA topoisomerase (with alternative splicing) [Oryza
sativa Japonica Group]
gi|53127614|emb|CAD71263.1| putative topoisomerase VI subunit A [Oryza sativa Indica Group]
gi|108711121|gb|ABF98916.1| Phytochrome C, putative, expressed [Oryza sativa Japonica Group]
gi|150371041|dbj|BAF65344.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|218193764|gb|EEC76191.1| hypothetical protein OsI_13532 [Oryza sativa Indica Group]
gi|222625809|gb|EEE59941.1| hypothetical protein OsJ_12593 [Oryza sativa Japonica Group]
gi|255674904|dbj|BAH92371.1| Os03g0752200 [Oryza sativa Japonica Group]
gi|269859219|gb|ACZ52153.1| topoisomerase 6 subunit A-like protein [Oryza sativa Japonica
Group]
Length = 381
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + +L V D +PYG IL Y FGS +A L VP+I+WLG+F SD E
Sbjct: 244 FLRYLVEQLHLPVYCLVDADPYGFDILATYKFGSLQLAYDANFLRVPDIRWLGVFTSDFE 303
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y +P C LS +D K + L + L R W EL+ M ++G K EIEAL
Sbjct: 304 DYRLPDCCLLHLSSEDRRKAEGILSRCYL---HREAPQWRLELEAMLQKGVKFEIEALSA 360
Query: 174 YEYKYLANKYLPSKFR 189
+L+ +Y+P K +
Sbjct: 361 CSISFLSEEYIPKKIK 376
>gi|395752486|ref|XP_002830510.2| PREDICTED: meiotic recombination protein SPO11 [Pongo abelii]
Length = 384
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 76 GIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKT 135
I I+ +Y +GS +M+ L VP I+WLGL PSDL++ N+PK L+K D KL +
Sbjct: 270 SIEIMCIYKYGSMSMSFEAHHLTVPAIRWLGLLPSDLKRLNVPKDSLIPLTKRDQMKLDS 329
Query: 136 FLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
L + +V W KE++ M+ KAEI+AL YL+ YLP+K + W+
Sbjct: 330 ILRR----PYVTCQPFWRKEMEIMADSKMKAEIQALTFLSSDYLSRVYLPNKLKFGGWI 384
>gi|326932162|ref|XP_003212189.1| PREDICTED: meiotic recombination protein SPO11-like [Meleagris
gallopavo]
Length = 382
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L+R++ + + D +P+G+ I+ +Y +GS +M+ +L VP IKWLGL PSD+
Sbjct: 245 LLVRKLWDTFQIPIFTLVDADPHGVEIMCIYKYGSVSMSFEAHQLTVPCIKWLGLLPSDI 304
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ NI + +K D +KL + ++ ++ +W++EL+ M+ KAEI+ L
Sbjct: 305 KRLNIREDILIPFTKQDQNKLTSLQKR----PYIACQPAWKEELEIMAASKMKAEIQVLT 360
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
YL+ YLP+K + W+
Sbjct: 361 SLSSDYLSRVYLPNKLQFCGWI 382
>gi|168003862|ref|XP_001754631.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694252|gb|EDQ80601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 292
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 5/142 (3%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + +L V G D +PYG+ IL++Y FGS MA LAVP+I WLG+F SDL
Sbjct: 155 FLRRLVDQLHLPVYGLMDGDPYGLDILSIYRFGSLTMAYDAKVLAVPSILWLGIFLSDLG 214
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNA-SWEKELQKMSKEGEKAEIEALD 172
+ + + C +SK D K L K ++++ A +W +L + K E+EA+
Sbjct: 215 HFGLTENCLLPMSKRDEKKADAILNK----SYIQQLAPAWWSKLAEFRTRRVKLEVEAIS 270
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ LA+ Y+PSK R + ++
Sbjct: 271 TVSFTSLADHYIPSKIRGQCYI 292
>gi|357494931|ref|XP_003617754.1| Meiotic recombination protein SPO11 [Medicago truncatula]
gi|355519089|gb|AET00713.1| Meiotic recombination protein SPO11 [Medicago truncatula]
Length = 452
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 69/161 (42%), Gaps = 43/161 (26%)
Query: 71 DCNPYGIHILTVYMFGS----------------------------------------KNM 90
DC+PYG ILT Y FGS + M
Sbjct: 292 DCDPYGFDILTTYRFGSMVSICKFISSEVLQHAYLLLQGSQHEVYMIVEWIKSLSNDRQM 351
Query: 91 AGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNA 150
A L VP I WLG FPSD E+Y +PK C L+ +D K++ L + L R
Sbjct: 352 AYDTKHLRVPEIHWLGAFPSDSERYFVPKQCLLPLTAEDKRKIEAMLLRCYL---QREVP 408
Query: 151 SWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAE 191
W EL+ M ++G K EIEAL ++ +L Y+PSK +
Sbjct: 409 QWRLELKMMLQKGVKFEIEALSVHTLSFLTESYIPSKIHGK 449
>gi|302037397|ref|YP_003797719.1| DNA topoisomerase VI subunit A [Candidatus Nitrospira defluvii]
gi|300605461|emb|CBK41794.1| DNA topoisomerase VI, subunit A [Candidatus Nitrospira defluvii]
Length = 368
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L R + + K V D +P+G +I +V GS N+A + R+A+P K++GL +D E
Sbjct: 232 LARRLHEEHKLPVYVLVDNDPWGYYIYSVVKQGSINLAFESQRMAIPKAKFIGLSSADPE 291
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+Y +P+ L++ DI++ K L + F + +W++E+++M G K E++AL
Sbjct: 292 RYELPRNVGIKLNEKDITRAKELL---NYQWFQK--PAWQQEIKRMLTSGLKYELDALAN 346
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
+++YL KYLP K + +DWL
Sbjct: 347 KDFQYLTKKYLPRKLKEKDWL 367
>gi|328719464|ref|XP_003246771.1| PREDICTED: meiotic recombination protein SPO11 [Acyrthosiphon
pisum]
Length = 325
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ ++++ CKL +L D NP+GI I+ VY FGS +M +N L VP+IKWLG++P+D+
Sbjct: 226 LFVKQLSCKLNIPILVLVDANPFGIEIMCVYRFGSNSMVHQNEMLCVPSIKWLGVYPTDI 285
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMS 160
E N+P + L +D +LK+ L++ +++ SN K LQ++S
Sbjct: 286 ESLNLPSIALTNLDQD---RLKSLLKR----SYINSN---HKLLQQVS 323
>gi|197210319|gb|ACH48180.1| Spo11 [Acyrthosiphon pisum]
Length = 317
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ ++++ CKL +L D NP+GI I+ VY FGS +M +N L VP+IKWLG++P+D+
Sbjct: 218 LFVKQLSCKLNIPILVLVDANPFGIEIMCVYRFGSNSMVHQNEMLCVPSIKWLGVYPTDI 277
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMS 160
E N+P + L +D +LK+ L++ +++ SN K LQ++S
Sbjct: 278 ESLNLPSIALTNLDQD---RLKSLLKR----SYINSN---HKLLQQVS 315
>gi|169807684|emb|CAQ16341.1| Topoisomerase 6 subunit A [Platanus x acerifolia]
Length = 138
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +S+ +L + A + + + N F I + +G + + L++++ +L
Sbjct: 19 DMQSDALFILLVEKDAAYMRLAEDRFYNRFPCIIVTAKGQPDVATR----LFLKKMKTEL 74
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
K VL D +PYG+ IL+VY GSKNM+ + L P+IKWLG+ PSDL+KY IP+ CR
Sbjct: 75 KLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCR 134
>gi|242018089|ref|XP_002429514.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
gi|212514456|gb|EEB16776.1| Meiotic recombination protein SPO11, putative [Pediculus humanus
corporis]
Length = 380
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
KL+ +L D +PYG I+ VY FGS +M+ LA P+I+WLG+ P+D++ L
Sbjct: 254 KLQIPILALCDADPYGFEIMCVYRFGSVSMSNLADSLACPSIRWLGIHPNDIKPL---LL 310
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
Q LS +DI K+K + + ++V+ N + +LQ KE KAEIE + +L
Sbjct: 311 NSQTLSANDIKKIKNAMNR----SYVQKNFNLINQLQTFLKENRKAEIEEISNISPNFLI 366
Query: 181 NKYLPSKFRAEDW 193
+ YL +K + +++
Sbjct: 367 DVYLKNKIQCKEY 379
>gi|408405571|ref|YP_006863554.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366167|gb|AFU59897.1| type 2 DNA topoisomerase 6, subunit A [Candidatus Nitrososphaera
gargensis Ga9.2]
Length = 368
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
++++ + + KK V+ D +P+G+ I Y GS++++ + RL P+ K LG+ SD+
Sbjct: 232 MMVKALNEEWKKPVVVFADADPWGLGIALRYKIGSESLSYDSDRLVTPDAKVLGMMFSDI 291
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+YNIP++ R S DD+++ +K + W+KEL K+ EK E++A
Sbjct: 292 YEYNIPEVARLAASDDDLNRANDMKKKPWF-----QDKQWQKELDLFLKKKEKCELDAFF 346
Query: 173 MYEYKYLANKYLPSKFR 189
+ +KYLA YLP K R
Sbjct: 347 KHGFKYLAEVYLPRKLR 363
>gi|320170822|gb|EFW47721.1| meiotic recombination protein SPO11 [Capsaspora owczarzaki ATCC
30864]
Length = 673
Score = 79.0 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+P+G IL Y +GS+ +A + L VP+++WLGL PSD++K+NI + ++ D
Sbjct: 550 DCDPHGFDILCNYKYGSRALAFDSENLTVPSLRWLGLLPSDIDKFNIQEANWLAFNQYDT 609
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM-YEYKYLANKYLPSKFR 189
KL + L L + W +EL+ M G K E++AL++ + +L ++LP K +
Sbjct: 610 GKLTSLLNAPFLT--LPDLHLWREELELMQARGIKCELQALNVDGDLTFLTGRFLPHKLQ 667
Query: 190 AEDWL 194
+ +L
Sbjct: 668 SGHFL 672
>gi|405945979|gb|EKC17530.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 236
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+TVY +GS++++ L VP ++WLG+ PSD+++ + + L D
Sbjct: 118 DADPYGIEIMTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKEDSLIDLKLSDR 177
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+K+ L + ++ + KEL + G+KAEIE+LD +L N YLP+K +
Sbjct: 178 NKISDILAR----PYISKSQLLYKELNVLLDLGKKAEIESLDSISTSFLTNVYLPTKLK 232
>gi|405969559|gb|EKC34523.1| Meiotic recombination protein SPO11 [Crassostrea gigas]
Length = 614
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I+TVY +GS++++ L VP ++WLG+ PSD+++ + L D
Sbjct: 496 DADPYGIEIMTVYKYGSRSLSFEAPMLTVPGLEWLGVLPSDIQRLRLKDDSFIDLKLSDR 555
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+K+ L + ++ + KEL + G+KAEIE+LD +L N YLP+K +
Sbjct: 556 NKITDILAR----PYISKSQLLYKELNVLLDLGKKAEIESLDSISTSFLTNVYLPTKLK 610
>gi|440791105|gb|ELR12359.1| topoisomerase Spo11, putative [Acanthamoeba castellanii str. Neff]
Length = 312
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
VL D +P+G+ IL Y FGS M LA P + WLG+ DL+K+ +P C L
Sbjct: 188 VLALCDYDPWGLQILCTYAFGSLRMTYDAESLATPELLWLGVHDEDLKKWELPAACFANL 247
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+ D K +T L + +++ +W +L+ M G+K E++AL +L + +LP
Sbjct: 248 TDVDKRKGETMLS----MPALQAKPTWRNQLKSMLAGGKKIEMQALSSISISFLCDTFLP 303
Query: 186 SKFRAEDWL 194
K WL
Sbjct: 304 DKMAKAQWL 312
>gi|443684396|gb|ELT88325.1| hypothetical protein CAPTEDRAFT_89794 [Capitella teleta]
Length = 364
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI-LSKDD 129
D +P+G+ I++ Y +GSK + L VP+++WLG+ PS++++ IP + L++ D
Sbjct: 245 DADPHGLEIMSTYKYGSKAQSFEANHLTVPSLRWLGILPSEVQRL-IPSTNGLMQLTERD 303
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I K L + ++ + W+ E++ + K KAEI+ L +L+N YLP+K R
Sbjct: 304 IKKANELLTR----PYLSAQPLWKTEIEYLIKTKMKAEIQCLSQIAIDFLSNIYLPNKIR 359
Query: 190 AEDWL 194
WL
Sbjct: 360 NSSWL 364
>gi|39794780|gb|AAH64120.1| Spo11 protein [Mus musculus]
Length = 101
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 97 LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKEL 156
L +P I+WLGL PSD+++ NIPK L+K D KL + L++ ++ W+KEL
Sbjct: 8 LTIPTIRWLGLLPSDIQRLNIPKDSLIPLTKHDQMKLDSILKR----PYITYQPLWKKEL 63
Query: 157 QKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
+ M+ KAEI+AL + YL+ YLP+K R W+
Sbjct: 64 EMMADSKMKAEIQALTLLSSDYLSRVYLPNKLRFGGWI 101
>gi|321478172|gb|EFX89130.1| meiotic recombination protein Spo11 [Daphnia pulex]
Length = 295
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 55 LREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEK 114
LR + +L+ L D +P+GI IL VY FGS+N+ L+ P ++++GL PSD+E
Sbjct: 161 LRRLWDELQLPPLALVDADPHGISILAVYRFGSQNLEDIE-HLSTPQLRYIGLQPSDIEA 219
Query: 115 YNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMY 174
IP + L++ D S + T + F+ N +++ + + K EI+ L
Sbjct: 220 LQIPDEAKLPLTQRDRSLVDTLASR----PFITQNQLLRDQVKLLRRLDCKVEIQGLTKI 275
Query: 175 EYKYLANKYLPSKFRAEDWL 194
++L+ YLP+K ++ W+
Sbjct: 276 HPQFLSRTYLPAKIQSMSWM 295
>gi|383864596|ref|XP_003707764.1| PREDICTED: meiotic recombination protein SPO11-like [Megachile
rotundata]
Length = 388
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++ + KL V D +P+G+ I+ VY FGS ++ N L PN++WLG+ PS+L
Sbjct: 258 MLVKLLAEKLGLPVYVVVDADPFGVDIMCVYRFGSSTLSKENESLVCPNVRWLGIHPSEL 317
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+ + + L++ D+SKL + + + KEL+ M K KAEIE +
Sbjct: 318 QPLGVNTI---PLTEFDLSKLTAIESRPYMT------PRFFKELEIMRK--GKAEIENVS 366
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+ K+L + YLP K + +D++
Sbjct: 367 SFSRKFLTSMYLPCKIKGQDYI 388
>gi|153005629|ref|YP_001379954.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. Fw109-5]
gi|152029202|gb|ABS26970.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. Fw109-5]
Length = 367
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L++ + +LK V D +P+G +I +V GS N+A ++R+AVP+ +++GL D
Sbjct: 231 LVQRLHTELKLPVYVLVDNDPWGFYIYSVMKQGSINLAYESMRMAVPDARFIGLSSFDKA 290
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y +P ++ D ++ K L F R W++E+++M G+K E+EAL
Sbjct: 291 TYKLPDNVAIKMNDQDNARAKQMLA---YPWFQR--PKWQREIEEMVHSGQKYELEALSR 345
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
++ +YLP K R DWL
Sbjct: 346 RGISFITEEYLPRKLRDRDWL 366
>gi|86159261|ref|YP_466046.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775772|gb|ABC82609.1| DNA topoisomerase, type IIB [Anaeromyxobacter dehalogenans 2CP-C]
Length = 367
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G +I +V GS N+A ++R+AVP +++GL D K+ +P ++ D
Sbjct: 248 DNDPWGFYIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDD 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
++ K L + W++E+Q+M + GEK E+EAL ++ +YLP K R
Sbjct: 308 ARAKQMLAYPWF-----KDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPKKLRD 362
Query: 191 EDWL 194
DWL
Sbjct: 363 RDWL 366
>gi|197123330|ref|YP_002135281.1| DNA topoisomerase VI subunit A [Anaeromyxobacter sp. K]
gi|196173179|gb|ACG74152.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter sp. K]
Length = 367
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G +I +V GS N+A ++R+AVP +++GL D K+ +P ++ D
Sbjct: 248 DNDPWGFYIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDD 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
++ K L + W++E+Q+M + GEK E+EAL ++ +YLP K R
Sbjct: 308 ARAKQMLAYPWF-----KDPKWQREIQEMVRSGEKYELEALSRRGISFITEEYLPRKLRD 362
Query: 191 EDWL 194
DWL
Sbjct: 363 RDWL 366
>gi|220918120|ref|YP_002493424.1| DNA topoisomerase VI subunit A [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955974|gb|ACL66358.1| DNA topoisomerase (ATP-hydrolyzing) [Anaeromyxobacter dehalogenans
2CP-1]
Length = 367
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G +I +V GS N+A ++R+AVP +++GL D K+ +P ++ D
Sbjct: 248 DNDPWGFYIYSVLKQGSINLAYESMRMAVPKARFIGLSSFDKAKFKLPGNVSIRMNDQDD 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
++ K L + W++E+Q+M + GEK E+EAL ++ +YLP K R
Sbjct: 308 ARAKQMLAYPWF-----KDPKWQREIQEMVRSGEKYELEALSRRGISFVTEEYLPRKLRD 362
Query: 191 EDWL 194
DWL
Sbjct: 363 RDWL 366
>gi|156552691|ref|XP_001599577.1| PREDICTED: meiotic recombination protein SPO11 [Nasonia
vitripennis]
Length = 381
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 11/133 (8%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
K++ V D NPYG I+ VY FG+ N +G +L ++WLG+ DL YNIP++
Sbjct: 259 KVRLPVYALVDANPYGFEIMCVYRFGTLNNSGFRKQLLCSEMRWLGVHQEDLRLYNIPRV 318
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
L+K D K+ +++ ++V S+ S K L +M K+G KAEIE++ + ++LA
Sbjct: 319 ---RLTKGDYKKIGELMDR----SYVDSDFS--KHLMEM-KQG-KAEIESVQQPKKRFLA 367
Query: 181 NKYLPSKFRAEDW 193
+ Y+P K R +++
Sbjct: 368 DFYIPEKIRLKNY 380
>gi|84490128|ref|YP_448360.1| DNA topoisomerase VI subunit A [Methanosphaera stadtmanae DSM 3091]
gi|84373447|gb|ABC57717.1| type II DNA topoisomerase VI, subunit A [Methanosphaera stadtmanae
DSM 3091]
Length = 357
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N LA P+ K+LG+ SD+E Y++P L D+
Sbjct: 239 DGDPWGFHIAMVIISGSAKLAHVNHDLATPDAKFLGVTASDIENYDLPT---DKLKDIDV 295
Query: 131 SKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
++LK +L A R A W+ E++KM K G KAE ++ Y +Y+ + Y P+K
Sbjct: 296 ARLK------ELAADPRYKADFWQTEIKKMIKLGRKAEQQSFSKYGLEYIVDNYFPNKIS 349
Query: 190 A 190
A
Sbjct: 350 A 350
>gi|326435144|gb|EGD80714.1| hypothetical protein PTSG_01304 [Salpingoeca sp. ATCC 50818]
Length = 435
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D + +G+ IL Y +GS+++A +N LAVP+I+WLG+FPSDL ++N+ + +S +
Sbjct: 312 DADAHGLEILCTYAYGSQSLAFQNHELAVPHIRWLGVFPSDLTEFNVALHPQSRMSDREY 371
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEY-KYLANKYLPSKFR 189
L+ E+ L +R +EL + + KAEIE L+ E ++L YLP K
Sbjct: 372 RLLEALSEREHLPQQMR------EELLLLQRMEHKAEIEILNSPERPRFLVEHYLPWKLH 425
Query: 190 A 190
Sbjct: 426 T 426
>gi|15679026|ref|NP_276143.1| DNA topoisomerase VI subunit A [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3122955|sp|O27089.1|TOP6A_METTH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2622109|gb|AAB85504.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 353
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 16/124 (12%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N +LA P+ K+LG+ SD+ Y++P L D+
Sbjct: 238 DGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPT---DPLKDVDV 294
Query: 131 SKLKTFLE----KGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPS 186
+LK L+ +GD W+ E++KM G+KAE ++ Y +Y+ + YLP
Sbjct: 295 VRLKELLQDPRYRGDF---------WKTEIKKMLTIGKKAEQQSFSKYGLEYVVDTYLPE 345
Query: 187 KFRA 190
K A
Sbjct: 346 KLEA 349
>gi|123407440|ref|XP_001303010.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
gi|121884352|gb|EAX90080.1| Type IIB DNA topoisomerase family protein [Trichomonas vaginalis
G3]
Length = 384
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+R + L ++G FD + YGI I+ ++ +GS + A +A P++ WLG+ PSDL
Sbjct: 253 FVRLLDDSLSIPIVGLFDGDAYGIFIMHLFKYGSMSAAQDGHAMACPHMMWLGIRPSDL- 311
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEK--GDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
LS +++ + EK +++ F + W+KE++ + + KAEIEAL
Sbjct: 312 ---------NFLSSNEMLTITDKEEKILRNILTFDHLSEEWKKEIKLILETKRKAEIEAL 362
Query: 172 DMYEYKYLANKYLPSKFRAEDWL 194
YL + YLP KF DW+
Sbjct: 363 -CNSTNYLIDLYLPQKFANHDWI 384
>gi|84784010|gb|ABC61970.1| SPO11-like protein [Trichomonas vaginalis]
Length = 384
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+R + L ++G FD + YGI I+ ++ +GS + A +A P++ WLG+ PSDL
Sbjct: 253 FVRLLDDSLSIPIVGLFDGDAYGIFIMHLFKYGSMSAAQDGHAMACPHMMWLGIRPSDL- 311
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEK--GDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
LS +++ + EK +++ F + W+KE++ + + KAEIEAL
Sbjct: 312 ---------NFLSSNEMLTITDKEEKILRNILTFDHLSEEWKKEIKLILETKRKAEIEAL 362
Query: 172 DMYEYKYLANKYLPSKFRAEDWL 194
YL + YLP KF DW+
Sbjct: 363 -CNSTNYLIDLYLPQKFANHDWI 384
>gi|261402948|ref|YP_003247172.1| DNA topoisomerase VI subunit A [Methanocaldococcus vulcanius M7]
gi|261369941|gb|ACX72690.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus vulcanius
M7]
Length = 369
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +L++P+ + +G+ P D+ Y++P L + D
Sbjct: 249 DGDPYGYLNIYRTLKVGSGKAIHLADKLSIPSARLIGVTPQDIVDYDLPT---HPLKEQD 305
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I ++K L+ D FVRS W+K L++M G +AE ++L Y KY+ N YLP K +
Sbjct: 306 IKRIKDGLKNDD---FVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPEKIK 362
Query: 190 AED-WL 194
E WL
Sbjct: 363 DESTWL 368
>gi|327310402|ref|YP_004337299.1| DNA topoisomerase [Thermoproteus uzoniensis 768-20]
gi|326946881|gb|AEA11987.1| DNA topoisomerase (ATP-hydrolyzing) [Thermoproteus uzoniensis
768-20]
Length = 357
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI+I +VY GS ++ + RLA P K+LG+ P D+E+Y IP + DI
Sbjct: 239 DGDPYGIYIYSVYKSGSIKLSYESERLATPKAKFLGVAPLDIERYKIPDQFVIRATDRDI 298
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L+ N W+KEL+ K +K EIEAL + KYL + Y+ K R
Sbjct: 299 KRAQELLKYPWF-----QNDVWKKELEYFLKTKKKVEIEALSAHGLKYLHD-YIKDKIRG 352
>gi|315425013|dbj|BAJ46687.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|315426694|dbj|BAJ48319.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
gi|343485466|dbj|BAJ51120.1| DNA topoisomerase VI subunit A [Candidatus Caldiarchaeum
subterraneum]
Length = 365
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
V + AI + V + + I + G A R +R + +L V
Sbjct: 195 VFVVEKGAIYQRFLEENVPSKYKAIVVHTAGQAPRATRK----FIRRLNTELGLPVYIFT 250
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G+HI +V +FGS ++ L VP+ W GL+ SD+ KY +P + + +DI
Sbjct: 251 DADPWGMHIASVIVFGSA-LSAHVRELNVPDAVWAGLWASDITKYKLPAMK---FNDEDI 306
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
++ + V+ W++E+ K +KAE+EAL Y +Y+ + YLP K
Sbjct: 307 RRVAELEKDPRYVS-----DPWKREISNFKKLQKKAELEALSRYGLEYIVSDYLPEKL 359
>gi|87306802|ref|ZP_01088948.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
gi|87290175|gb|EAQ82063.1| DNA topoisomerase VI subunit A [Blastopirellula marina DSM 3645]
Length = 389
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL + +LK + FD +P+G +I +V GS N+A + R+AVP K+LGL D E
Sbjct: 252 LLHRLHNELKLPIYCVFDNDPWGYYIYSVIKQGSINLAYESKRMAVPEAKFLGLRAIDYE 311
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+ N+ + L+ D + K + + +W+KE+QK+ G K E+EAL
Sbjct: 312 RCNLNPSVQIALNDTDRKRAKQIAK----YPWFEQKKTWQKEIQKLLDNGFKLEVEALIS 367
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
Y+ + Y+P + WL
Sbjct: 368 QGLSYVTDVYVPERLEDRTWL 388
>gi|119719577|ref|YP_920072.1| DNA topoisomerase VI subunit A [Thermofilum pendens Hrk 5]
gi|119524697|gb|ABL78069.1| Spo11/DNA topoisomerase [Thermofilum pendens Hrk 5]
Length = 379
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D + YG +I +VY GS +++ + RLA P ++LG+ PSD+E+Y + + + D+
Sbjct: 260 DGDSYGFYIYSVYRSGSISLSYESERLATPEARFLGVSPSDIERYELQGFTIKATER-DL 318
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ K + + + + W +EL+ ++ EK EIEA + KYL+++Y+P K +
Sbjct: 319 KRAKELMN----YPWFKESKRWMEELELFLEKKEKVEIEAFAKHGLKYLSSEYIPKKIKN 374
Query: 191 EDWL 194
+ W+
Sbjct: 375 KQWI 378
>gi|304315143|ref|YP_003850290.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
gi|302588602|gb|ADL58977.1| type II DNA topoisomerase VI, subunit A [Methanothermobacter
marburgensis str. Marburg]
Length = 353
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N +LA P+ K+LG+ SD+ Y++P L D+
Sbjct: 238 DGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPT---DPLKDIDV 294
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+LK L + W+ E++KM K G+KAE ++ Y +Y+ + YLP K A
Sbjct: 295 VRLKELLNDPRY-----RDEFWKTEIKKMLKIGKKAEQQSFSKYGLEYVVDTYLPEKLEA 349
>gi|352681956|ref|YP_004892480.1| type II DNA topoisomerase VI subunit A [Thermoproteus tenax Kra 1]
gi|350274755|emb|CCC81401.1| type II DNA topoisomerase VI, subunit A [Thermoproteus tenax Kra 1]
Length = 366
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI+I +VY GS ++ + RLA P K+LG+ P D+E+Y IP ++ DI
Sbjct: 248 DGDPYGIYIYSVYKSGSIKLSYESERLATPRAKFLGVAPLDIERYKIPDQFVIRATERDI 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ + L+ N W+KEL K +K EIEAL + KYL + Y+ K R
Sbjct: 308 KRAQELLKYPWF-----QNEIWKKELDYFLKTKKKVEIEALSAHGLKYLHD-YIKDKIR 360
>gi|167042185|gb|ABZ06918.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_ANIW93H17]
gi|167044315|gb|ABZ08994.1| putative Type IIB DNA topoisomerase [uncultured marine
crenarchaeote HF4000_APKG6B14]
Length = 365
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 89/186 (47%), Gaps = 17/186 (9%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E++ +V+ + + + V F I + G A R+ LL+ + +L
Sbjct: 189 ETSAEVVIAVEKGGLFTRFVEEQVDKKFKAIIVDTGGQAPRSTRT----LLKRLHDELSL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQ 123
V+ D + YG HI V GS N A +LR L VP+ KW+G++ +D+EKY +P +
Sbjct: 245 PVVILTDGDVYGEHIAMVIKSGSANAA--HLRGLTVPDAKWVGVWATDIEKYKLPTIP-- 300
Query: 124 ILSKDDISKLKTFLEKGDLVAFVR-SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
+++ DI + DL+ R W+KEL+ K KAE+EA Y + +K
Sbjct: 301 -MTESDIKRCH------DLLKDPRYQEGIWKKELEVFLKIKRKAELEAFSKYGLTNITDK 353
Query: 183 YLPSKF 188
YLP K
Sbjct: 354 YLPHKL 359
>gi|148508003|gb|ABQ75802.1| DNA topoisomerase VI subunit A [uncultured haloarchaeon]
Length = 366
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 12/190 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E++ VL + + +R ++ N + I + +G R +++ +L
Sbjct: 189 ETDAQFVLAVETGGMRDRLVENGFDEEYNAIIVHLKGQPARATRR----IIKRFNTELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V D +P+ I +GS A + LA P+ +++G+ P D+ KYN+P I
Sbjct: 245 PVAVFTDGDPWSYRIYASVSYGSIKSAHLSEYLATPDAQYVGITPEDITKYNLPS---DI 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
LS DI+ L++ LE S WEK+++ K G+KAE +AL Y+ + YL
Sbjct: 302 LSDSDINALESELEDPRF-----STEYWEKQIKLQLKIGQKAEQQALASRGLDYVTDSYL 356
Query: 185 PSKFRAEDWL 194
P K +L
Sbjct: 357 PEKLAQHGFL 366
>gi|15668545|ref|NP_247343.1| DNA topoisomerase VI subunit A [Methanocaldococcus jannaschii DSM
2661]
gi|2495937|sp|Q57815.1|TOP6A_METJA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|1591076|gb|AAB98358.1| DNA topoisomerase VI, subunit A (top6A) [Methanocaldococcus
jannaschii DSM 2661]
Length = 369
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +L++P + +G+ P D+ Y++P L + D
Sbjct: 249 DGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPT---HPLKEQD 305
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I ++K L+ D FVRS W+K L++M G +AE ++L Y KY+ N YLP K +
Sbjct: 306 IKRIKDGLKNDD---FVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPEKIK 362
Query: 190 AED-WL 194
E WL
Sbjct: 363 DESTWL 368
>gi|289192630|ref|YP_003458571.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
gi|288939080|gb|ADC69835.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus sp.
FS406-22]
Length = 369
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +L++P + +G+ P D+ Y++P L + D
Sbjct: 249 DGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPT---HPLKEQD 305
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I ++K L+ D FVRS W+K L++M G +AE ++L Y KY+ N YLP K +
Sbjct: 306 IKRIKDGLKNDD---FVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPEKIK 362
Query: 190 AED-WL 194
E WL
Sbjct: 363 DESTWL 368
>gi|6573667|pdb|1D3Y|A Chain A, Structure Of The Dna Topoisomerase Vi A Subunit
gi|6573668|pdb|1D3Y|B Chain B, Structure Of The Dna Topoisomerase Vi A Subunit
Length = 301
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +L++P + +G+ P D+ Y++P L + D
Sbjct: 181 DGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIIDYDLPT---HPLKEQD 237
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I ++K L+ D FVRS W+K L++M G +AE ++L Y KY+ N YLP K +
Sbjct: 238 IKRIKDGLKNDD---FVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVNTYLPEKIK 294
Query: 190 AED-WL 194
E WL
Sbjct: 295 DESTWL 300
>gi|322786130|gb|EFZ12738.1| hypothetical protein SINV_13918 [Solenopsis invicta]
Length = 219
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 17/144 (11%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++ + KL V D +P+GI I+ +Y FGS + N LA PN +WLG+ PS+L
Sbjct: 90 MLVKMLSEKLNLPVYIVVDADPFGIEIMLIYRFGSSTLRKVNESLACPNARWLGIHPSEL 149
Query: 113 ---EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
IP L++ D+ KL++ +G + N + K+L + K KAEIE
Sbjct: 150 IAIGAKTIP------LTEADLVKLRSIEARGYV------NEAISKQLSILRK--GKAEIE 195
Query: 170 ALDMYEYKYLANKYLPSKFRAEDW 193
A+ + +L YL K +D+
Sbjct: 196 AVSSFSKNFLTETYLSYKIDGQDY 219
>gi|41615325|ref|NP_963823.1| DNA topoisomerase VI subunit A [Nanoarchaeum equitans Kin4-M]
gi|40069049|gb|AAR39384.1| NEQ542 [Nanoarchaeum equitans Kin4-M]
Length = 359
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L+R++R ++ V D +P+G +I +V GS N+A + +LA P+ K++GL D+
Sbjct: 224 LIRKLRYEVGLPVYVFTDGDPWGFYIYSVIKRGSMNLAMFSEQLATPDAKFIGLTIDDVI 283
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
KY++ + Q L D+ ++K +E N W+++ KM K KAE +AL
Sbjct: 284 KYDLKDVAIQ-LKPIDVKRVKELMEYPWF-----KNKEWQRQFNKMLKLNIKAEQDALAK 337
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
+ +++ANKYLP K ++L
Sbjct: 338 HSLEFVANKYLPEKIEKGEFL 358
>gi|333986519|ref|YP_004519126.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
gi|333824663|gb|AEG17325.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. SWAN-1]
Length = 352
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N LA PN K+LG+ SD+ Y++P L D+
Sbjct: 238 DGDPWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTASDIVNYDLPT---DKLKDIDV 294
Query: 131 SKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+LK +L R + W+ E++KM K G+KAE ++ Y +Y+ KYLP K
Sbjct: 295 LRLK------ELYKDPRYHEDFWKLEIKKMLKIGKKAEQQSFSKYGLEYVVEKYLPEKLD 348
Query: 190 A 190
A
Sbjct: 349 A 349
>gi|440797878|gb|ELR18952.1| DNA topoisomerase 6 subunit A, putative [Acanthamoeba castellanii
str. Neff]
Length = 464
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL+ + +L+ V+G FD NP G+ + Y +GS +G L +IKWLGL DLE
Sbjct: 329 LLKRLHEELRLPVVGLFDWNPGGMGVYITYRYGSVK-SGLESHLHTVDIKWLGLCWDDLE 387
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ ++P C Q ++ D ++++ G L + N E+EL+KM + G K EI+AL
Sbjct: 388 RMHLPSSCFQDQTERDRRRIRSIQASGCL----KDNPRCERELEKMLEAGVKVEIQAL 441
>gi|194704998|gb|ACF86583.1| unknown [Zea mays]
Length = 212
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 97 LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKEL 156
L VP+I+WLG+F SD E+Y +P C LS +D K + L + L R W EL
Sbjct: 118 LRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYL---HREAPEWRSEL 174
Query: 157 QKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ M ++G K EIEAL +L+++Y+P K +
Sbjct: 175 EAMLQKGVKFEIEALSANSISFLSHEYIPQKIK 207
>gi|256811385|ref|YP_003128754.1| DNA topoisomerase VI subunit A [Methanocaldococcus fervens AG86]
gi|256794585|gb|ACV25254.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus fervens
AG86]
Length = 369
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +L++P + +G+ P D+ Y++P L + D
Sbjct: 249 DGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGVTPQDIVDYDLPT---HPLKEQD 305
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I ++K L+ D FVRS W+K L++M G +AE ++L Y KY+ + YLP K +
Sbjct: 306 IKRIKDGLKNDD---FVRSFPEWQKALKQMLDMGVRAEQQSLAKYGLKYVVDTYLPEKIK 362
Query: 190 AED-WL 194
E WL
Sbjct: 363 DESTWL 368
>gi|408381803|ref|ZP_11179351.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
gi|407815734|gb|EKF86304.1| DNA topoisomerase VI subunit A [Methanobacterium formicicum DSM
3637]
Length = 351
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N +LA P+ K+LG+ SD+ Y++P L D+
Sbjct: 238 DGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPT---DPLKDIDV 294
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+LK + + +W+ E++KM K G+KAE ++ Y +Y+ + YLP K +
Sbjct: 295 LRLKELSKDPRY-----KDEAWQMEIKKMLKIGKKAEQQSFSKYGLEYVVDTYLPEKLES 349
>gi|357493057|ref|XP_003616817.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
gi|355518152|gb|AES99775.1| DNA topoisomerase 6 subunit A [Medicago truncatula]
Length = 275
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
MT E+ F +L + S A + + + F I + G + C K+V R++
Sbjct: 135 MTKREALF--ILLVESVATLVSLHSAGFEQRFPCIIVAGSGVPD-VCSRKLV---RKLSL 188
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
LK VL D + YG ILT+Y GS+ MA + L PNI WLG+ P D + Y+IP
Sbjct: 189 DLKLPVLALVDGDLYGFRILTIYNKGSQKMAYDSENLTTPNIYWLGVRPCDADHYDIPSG 248
Query: 121 CRQILSKDDISKLKTFLEK 139
C + LS ++ +K+ + K
Sbjct: 249 CIKQLSPTELKSVKSLMAK 267
>gi|413933050|gb|AFW67601.1| hypothetical protein ZEAMMB73_214766 [Zea mays]
Length = 380
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 97 LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKEL 156
L VP+I+WLG+F SD E+Y +P C LS +D K + L + L R W EL
Sbjct: 286 LRVPDIRWLGVFTSDFEEYCLPDCCLLRLSPEDRRKAEGILARCYL---HREAPEWRSEL 342
Query: 157 QKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ M ++G K EIEAL +L+++Y+P K +
Sbjct: 343 EAMLQKGVKFEIEALSANSISFLSHEYIPQKIK 375
>gi|391331670|ref|XP_003740266.1| PREDICTED: meiotic recombination protein SPO11-like [Metaseiulus
occidentalis]
Length = 288
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D + YGI I +Y FGS A VP I+W+GL PS++E +N+ R + S
Sbjct: 168 DADAYGIEIAGIYSFGSLVQAYAE-NYGVPQIRWIGLLPSEIESFNMRPESRIVSSTMHQ 226
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+L+ L + +++ W +E+ K+ KAEI+ALD + + +L YL K R
Sbjct: 227 KRLQNLLVR----PWMKLRRQWYQEVLKLLSLRCKAEIQALDQFGHSFLLRTYLSDKLRG 282
Query: 191 ED 192
++
Sbjct: 283 KE 284
>gi|150399499|ref|YP_001323266.1| DNA topoisomerase VI subunit A [Methanococcus vannielii SB]
gi|150012202|gb|ABR54654.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus vannielii SB]
Length = 365
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LA+P+ + +G+ P D+ Y++P L D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAIPDARLIGVTPQDILDYDLPT---HPLKDHD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I +LK L+ D FVRS W+K L +M+ +AE ++L Y KY+ +YLP+K
Sbjct: 302 IKRLKDGLKNDD---FVRSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPTKVE 358
Query: 190 AED-WL 194
+ WL
Sbjct: 359 DQSTWL 364
>gi|348676336|gb|EGZ16154.1| hypothetical protein PHYSODRAFT_506531 [Phytophthora sojae]
Length = 376
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 62 LKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLC 121
LK VLG DCNP+G+ I+ Y GS M +L AV +IKW+G+ PS + +P+
Sbjct: 248 LKIPVLGLCDCNPFGLSIMLTYKLGSARMPLESLEYAV-DIKWVGVRPSQIAALGLPQSS 306
Query: 122 RQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEG--EKAEIEALDMYEYKYL 179
+ L++ DI+ + L+ +FV++N + E+Q ++ K E+EAL + +L
Sbjct: 307 FKALTRKDIAVANSLLQ----ASFVQANEHYRDEVQMWLEDSLPWKIELEALHFLGFTFL 362
Query: 180 AN 181
+
Sbjct: 363 TS 364
>gi|150401437|ref|YP_001325203.1| DNA topoisomerase VI subunit A [Methanococcus aeolicus Nankai-3]
gi|150014140|gb|ABR56591.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus aeolicus
Nankai-3]
Length = 363
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +L++P+ + +G+ P D+ Y++P L D
Sbjct: 243 DGDPYGYLNIYRTLKVGSGKSVHLADKLSIPSARLIGVTPQDINDYDLPT---HPLKDHD 299
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I +LK L+ D FV+S+ W+K + M + E+AE ++L Y KY+ +YLP+K
Sbjct: 300 IKRLKDGLKNDD---FVKSHPEWQKAINHMIESKERAEQQSLAKYGLKYVVEEYLPAKIE 356
Query: 190 AED-WL 194
+ WL
Sbjct: 357 DKSTWL 362
>gi|392569898|gb|EIW63071.1| DNA topoisomerase IV alpha subunit [Trametes versicolor FP-101664
SS1]
Length = 389
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D + YGI IL+VY FGS +M +LA I+WLGL+ S+L IPK ++K D
Sbjct: 244 DGDAYGIDILSVYKFGSTSMQHEKDQLAAARIQWLGLWSSELAALGIPKDALIPITKHDE 303
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
K ++ L++ + + W KELQ+M KAEIE L
Sbjct: 304 KKARSLLKREGI------PSDWRKELQRMLFTRRKAEIEVL 338
>gi|307211946|gb|EFN87858.1| Meiotic recombination protein SPO11 [Harpegnathos saltator]
Length = 409
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 11/142 (7%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+LL+ + K+ V D +P+G+ I+ +Y FGS + N L PN +WLG+FP++L
Sbjct: 279 MLLKLLSDKMDLPVYIVADADPFGVDIVLIYRFGSMALCRENENLTCPNARWLGIFPTEL 338
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+ LS+ D++KL++ + A+V N + K+L + K KAEIEA+
Sbjct: 339 IALGAKTVP---LSEADLAKLRSIEAR----AYV--NEAISKQLSVLRK--GKAEIEAVS 387
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
+L YLP K D++
Sbjct: 388 TLSTNFLTATYLPYKIDGLDYI 409
>gi|325960094|ref|YP_004291560.1| type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
gi|325331526|gb|ADZ10588.1| Type 2 DNA topoisomerase 6 subunit A [Methanobacterium sp. AL-21]
Length = 358
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N LA PN K+LG+ SD+ Y++P L D+
Sbjct: 246 DGDPWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTASDIVNYDLPT---DPLKDIDV 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+LK + + W+ E++KM K G+KAE ++ Y +Y+ + Y+P K A
Sbjct: 303 LRLKELYKDPRY-----RDEFWKVEIKKMLKIGKKAEQQSFSKYGLEYVVDTYIPEKLDA 357
>gi|296110083|ref|YP_003617032.1| DNA topoisomerase (ATP-hydrolyzing) [methanocaldococcus infernus
ME]
gi|295434897|gb|ADG14068.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocaldococcus infernus
ME]
Length = 369
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 65 SVLGSFDCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQ 123
VL D +PYG ++I GS +L++P + +G+ P D+ Y++P
Sbjct: 243 PVLVFTDGDPYGYLNIYRTLKVGSGKAIHLADKLSIPAARLIGITPQDIIDYDLPT---H 299
Query: 124 ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
L + DI ++K L+ D FV+S W+K L++M + G +AE ++L Y KY+ N Y
Sbjct: 300 PLKEQDIKRIKDGLKNDD---FVKSFPEWQKALKQMLEMGVRAEQQSLAKYGLKYVVNTY 356
Query: 184 LPSKFRAED-WL 194
LP K + + WL
Sbjct: 357 LPEKLKDDSTWL 368
>gi|386876676|ref|ZP_10118766.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
gi|386805513|gb|EIJ65042.1| type IIB DNA topoisomerase [Candidatus Nitrosopumilus salaria BD31]
Length = 368
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
IV+ + + + + F I + G A R+ LL+ + ++K V+
Sbjct: 197 IVIAIEKGGLFTRFVEEQIDKKFKSIIINTGGQAPRSTRT----LLKRLHDEMKLPVIVL 252
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD 128
D + YG HI V GS N A +LR L VP+ KW+G++ +D+EKY +P + +++
Sbjct: 253 TDGDVYGEHIAMVIKSGSANAA--HLRELTVPDAKWVGVWATDIEKYKLPTIP---MTES 307
Query: 129 DISKLKTFLEKGDLVAFVR-SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
DI + DL R + W+KEL + KAE+EA Y + +KYLP K
Sbjct: 308 DIKRCY------DLQKDPRYQDGIWKKELDVFLRLKRKAELEAFSKYGLTNITDKYLPQK 361
Query: 188 F 188
Sbjct: 362 L 362
>gi|150402606|ref|YP_001329900.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C7]
gi|150033636|gb|ABR65749.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C7]
Length = 365
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LAVP + +G+ P D+ Y +P L D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPT---HPLKDHD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ +LK L+ D FVRS W+K L +M+ +AE ++L Y KY+ +YLP+K
Sbjct: 302 VKRLKDGLKNDD---FVRSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKIE 358
Query: 190 AED-WL 194
+ WL
Sbjct: 359 DQKTWL 364
>gi|148643016|ref|YP_001273529.1| DNA topoisomerase VI subunit A [Methanobrevibacter smithii ATCC
35061]
gi|222445253|ref|ZP_03607768.1| hypothetical protein METSMIALI_00881 [Methanobrevibacter smithii
DSM 2375]
gi|261350188|ref|ZP_05975605.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
gi|148552033|gb|ABQ87161.1| type II DNA topoisomerase VI, subunit A [Methanobrevibacter smithii
ATCC 35061]
gi|222434818|gb|EEE41983.1| type IIB DNA topoisomerase [Methanobrevibacter smithii DSM 2375]
gi|288860974|gb|EFC93272.1| type II DNA topoisomerase VI subunit A [Methanobrevibacter smithii
DSM 2374]
Length = 366
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 10/121 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N LA P+ K++G+ SD+ Y++P L D+
Sbjct: 253 DGDPWGFHIAQVIISGSAKLAHVNHDLATPDAKFMGVTASDIINYDLPT---DNLKDVDV 309
Query: 131 SKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+LK +L R + W+ E++KM K G+KAE ++ Y +Y+ + Y P K
Sbjct: 310 MRLK------ELAKDPRYKSDFWQTEIKKMLKIGKKAEQQSFSKYGLEYVVDTYFPEKLE 363
Query: 190 A 190
A
Sbjct: 364 A 364
>gi|332024438|gb|EGI64636.1| Meiotic recombination protein SPO11 [Acromyrmex echinatior]
Length = 423
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI-LSKDD 129
D +P+GI I+ +Y FGS + N LA PN +WLG+ PS+L IP + I L++ D
Sbjct: 311 DADPFGIDIMLIYRFGSSTLCKENESLACPNARWLGIHPSEL----IPIGAKTIPLTEAD 366
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ KL++ + ++V N + K+L + K KAE+EA+ + + YL K
Sbjct: 367 LIKLRSIEAR----SYV--NEAISKQLSILRK--GKAEMEAVSSFSKNFFTETYLSYKID 418
Query: 190 AEDWL 194
+D++
Sbjct: 419 GQDYI 423
>gi|333910721|ref|YP_004484454.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
gi|333751310|gb|AEF96389.1| Type 2 DNA topoisomerase 6 subunit A [Methanotorris igneus Kol 5]
Length = 365
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 66 VLGSFDCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
VL D +PYG ++I GS +LAVP+ + +G+ P D+ Y++P
Sbjct: 240 VLVFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPSARLIGVTPQDIIDYDLPT---HP 296
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L + DI ++K L+ D FV+S W+K L++M +AE ++L Y KY+ + YL
Sbjct: 297 LKEQDIKRIKDGLKNDD---FVKSFPEWQKALKQMLDMKVRAEQQSLAKYGLKYVVDTYL 353
Query: 185 PSKFRAED-WL 194
P K + E WL
Sbjct: 354 PEKIKDEKTWL 364
>gi|288561120|ref|YP_003424606.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
gi|288543830|gb|ADC47714.1| DNA topoisomerase VI subunit A [Methanobrevibacter ruminantium M1]
Length = 362
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N LA P+ K++G+ SD++ Y++P L D+
Sbjct: 250 DGDPWGFHIAQVIISGSAKLAHVNHDLATPDAKFIGVTASDIQNYDLPT---DPLKDIDV 306
Query: 131 SKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+LK +L R W+ E++KM K G+KAE ++ Y +Y+ + Y P K
Sbjct: 307 LRLK------ELSKDPRYQTDFWQTEIKKMLKLGKKAEQQSFSKYGLEYVVDTYFPEKL 359
>gi|126644799|ref|XP_001388116.1| topoisomerase VIA [Cryptosporidium parvum Iowa II]
gi|126117344|gb|EAZ51444.1| putative topoisomerase VIA [Cryptosporidium parvum Iowa II]
Length = 235
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L+ +I CK + L D +P+GI+I Y+ GS N + A P+I +LG+ D E
Sbjct: 103 LVSDIICKSGITALYLGDFDPHGINIYLTYVRGSSNFESQ--LAACPSIYYLGIHFEDTE 160
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
IP R ILS+ D S LK+ +E D V +N ++ +L M + K E+EA
Sbjct: 161 L--IPSDTRVILSEKDRSTLKSLIE--DPAIKVSTNIKYKCKL--MYEHNYKCELEAFQS 214
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
YL N YLPSK W+
Sbjct: 215 ISSDYLVNTYLPSKILRRTWI 235
>gi|374636729|ref|ZP_09708283.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
gi|373558021|gb|EHP84388.1| DNA topoisomerase (ATP-hydrolyzing) [Methanotorris formicicus
Mc-S-70]
Length = 365
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LA+P+ + +G+ P D+ Y++P L + D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAIPSARLIGVTPQDIVDYDLPT---HPLKEQD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I ++K L+ D FV+S W+K L++M +AE ++L Y KY+ + YLP K +
Sbjct: 302 IKRIKDGLKNDD---FVKSFPEWQKALKQMLDMKVRAEQQSLAKYGLKYVVDTYLPEKIK 358
Query: 190 AED-WL 194
E WL
Sbjct: 359 DEKTWL 364
>gi|134045187|ref|YP_001096673.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C5]
gi|132662812|gb|ABO34458.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanococcus
maripaludis C5]
Length = 365
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LAVP + +G+ P D+ Y +P L D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAVPESRLIGVTPQDIVDYELPT---HPLKDHD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ +LK L+ D FVRS W+K L +M+ +AE ++L Y KY+ +YLP+K
Sbjct: 302 VKRLKDGLKNDD---FVRSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKIE 358
Query: 190 -AEDWL 194
++ WL
Sbjct: 359 DSKTWL 364
>gi|395332754|gb|EJF65132.1| topoisomerase acting in meiosis [Dichomitus squalens LYAD-421 SS1]
Length = 342
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D + YGI IL+VY GS M N LA ++WLGL+ S+L I K +
Sbjct: 185 ILALVDGDAYGIDILSVYKHGSTRMRHENSHLAADRVQWLGLWASELASLGIDKDALLPI 244
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+K D K ++ L++ +L A W KELQ M KAEIE L
Sbjct: 245 TKHDEKKARSLLKRENL------PARWRKELQYMLFSRRKAEIEVL 284
>gi|161528915|ref|YP_001582741.1| DNA topoisomerase VI subunit A [Nitrosopumilus maritimus SCM1]
gi|160340216|gb|ABX13303.1| DNA topoisomerase (ATP-hydrolyzing) [Nitrosopumilus maritimus SCM1]
Length = 370
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
IV+ + + + V F I + G A R+ LL+ + ++ V+
Sbjct: 199 IVIAIEKGGLFTRFVEEQVDKKFKSIIINTGGQAPRSTRT----LLKRLHDEMGLPVIIL 254
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD 128
D + YG HI V GS N A +LR L VP+ KW+G++ +D+EKY +P + +++
Sbjct: 255 TDGDVYGEHIAMVIKSGSANAA--HLRELTVPDAKWVGVWATDIEKYKLPTIP---MTES 309
Query: 129 DISKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
DI + DL R + W+KEL+ + KAE+EA Y + +KYLP K
Sbjct: 310 DIKRCY------DLQKDPRYESGIWKKELEVFLRLKRKAELEAFAKYGLTNITDKYLPQK 363
Query: 188 F 188
Sbjct: 364 L 364
>gi|407463038|ref|YP_006774355.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046660|gb|AFS81413.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus koreensis
AR1]
Length = 370
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 17/181 (9%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
IV+ + + + + F I + G A R+ LL+ + +L V+
Sbjct: 199 IVIAIEKGGLFTRFVEEQIDKKFKSIIINTGGQAPRSTRT----LLKRLHDELGLPVIIL 254
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD 128
D + YG HI V GS N A +LR L VP+ KW+G++ +D+EKY +P + +++
Sbjct: 255 TDGDVYGEHIAMVIKSGSANAA--HLRELTVPDAKWVGVWATDIEKYKLPTIP---MTES 309
Query: 129 DISKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
DI + DL R + W+KEL+ + KAE+EA Y + +KYLP K
Sbjct: 310 DIKRCY------DLQKDPRYESGIWKKELEVFLRLKRKAELEAFAKYGLTNITDKYLPQK 363
Query: 188 F 188
Sbjct: 364 L 364
>gi|118575978|ref|YP_875721.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
gi|118194499|gb|ABK77417.1| DNA topoisomerase VI, subunit A [Cenarchaeum symbiosum A]
Length = 306
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 17/181 (9%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
IV+ + + + V F I + G A R+ LL+ + +L V+
Sbjct: 135 IVIAIEKGGLFTRFVEEQVDKKFKSIIVDTGGQAPRSTRT----LLKRLNSELGLPVVIL 190
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD 128
D + YG HI V GS A +LR L VP+ KW+G++ +D+EKY +P + +++
Sbjct: 191 TDGDVYGEHIAMVIKSGSAGAA--HLRELTVPDAKWVGVWATDIEKYKLPTIP---MTES 245
Query: 129 DISKLKTFLEKGDLVAFVR-SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
DI + DL R W KEL+ + KAE+EA Y + +KYLP K
Sbjct: 246 DIKRCH------DLKRDPRYQEGIWRKELEAFLRIKRKAELEAFSKYGLTNITDKYLPQK 299
Query: 188 F 188
Sbjct: 300 L 300
>gi|336121527|ref|YP_004576302.1| type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
gi|334856048|gb|AEH06524.1| Type 2 DNA topoisomerase 6 subunit A [Methanothermococcus
okinawensis IH1]
Length = 365
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 7/118 (5%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LAVP + +G+ P D+ Y++P L D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAVPAARLIGVTPQDIVDYDLPT---HPLKDHD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
+ +LK L+ D FV+S W+K L +M + E+AE ++L Y KY+ +YLP+K
Sbjct: 302 LKRLKDGLKNDD---FVKSFPEWQKALNQMIEMKERAEQQSLAKYGLKYVVEEYLPAK 356
>gi|6716731|gb|AAF26720.1|AF214638_1 Spo11 [Coprinopsis cinerea]
Length = 369
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYGI IL+VY +GS++M N LA IKWLGL S++ ++++ L+ D
Sbjct: 238 DCDPYGIDILSVYRYGSQSMRHENDTLATRRIKWLGLRISEVMEWDLDPSLLLPLTDYDE 297
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+K+++ L++ L W EL+ G KAEIE L
Sbjct: 298 NKIRSMLKRPHL------PRRWRDELEATQARGRKAEIEVL 332
>gi|340345432|ref|ZP_08668564.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520573|gb|EGP94296.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 368
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
IV+ + + + V F I + G A R+ LL+ + +L V+
Sbjct: 197 IVIAIEKGGLFTRFVEEQVDKKFKSIIINTGGQAPRSTRT----LLKRLHDELGLPVIIL 252
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD 128
D + YG HI V GS N A +LR L VP+ KW+G++ +D+EK+ +P + +++
Sbjct: 253 TDGDVYGEHIAMVIKSGSANAA--HLRELTVPDAKWVGVWATDIEKFKLPTIP---MTES 307
Query: 129 DISKLKTFLEKGDLVAFVR-SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
DI + DL R W+KEL K KAE+EA Y + +KYLP K
Sbjct: 308 DIKRCY------DLQTDPRYQEGIWKKELDVFLKIKRKAELEAFSKYGLTNITDKYLPQK 361
Query: 188 F 188
Sbjct: 362 L 362
>gi|407465398|ref|YP_006776280.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
gi|407048586|gb|AFS83338.1| DNA topoisomerase VI subunit A [Candidatus Nitrosopumilus sp. AR2]
Length = 373
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
IV+ + + + + F I + G A R+ LL+ + ++ V+
Sbjct: 202 IVIAIEKGGLFTRFVEEQIDKKFKSIIINTGGQAPRSTRT----LLKRLHDEMGLPVIVL 257
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD 128
D + YG HI V GS N A +LR L VP+ KW+G++ +D+EKY +P + +++
Sbjct: 258 TDGDVYGEHIAMVIKSGSANAA--HLRELTVPDAKWVGVWATDIEKYKLPTIP---MTES 312
Query: 129 DISKLKTFLEKGDLVAFVR-SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
DI + DL R + W+KEL + KAE+EA Y + +KYLP K
Sbjct: 313 DIKRCY------DLQKDPRYQDGIWKKELDVFLRLKRKAELEAFSKYGLTNITDKYLPQK 366
Query: 188 F 188
Sbjct: 367 L 367
>gi|323456369|gb|EGB12236.1| hypothetical protein AURANDRAFT_61362 [Aureococcus anophagefferens]
Length = 1086
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L+ ++R L V G D N +G+ +L Y GS + +R V ++KW+GL S ++
Sbjct: 60 LVHKLRGSLDVPVYGLVDWNSWGVGVLLCYKVGSARLGLEAVRYTV-DVKWIGLRSSQVD 118
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ +P CRQ L+ D + + L +V + +W++EL++ G K E+EAL
Sbjct: 119 RLELPASCRQPLTDRDRRRAEGLLAH----PWVATKPAWQRELRRQLDLGSKCELEAL 172
>gi|195028295|ref|XP_001987012.1| GH20206 [Drosophila grimshawi]
gi|193903012|gb|EDW01879.1| GH20206 [Drosophila grimshawi]
Length = 334
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 22/172 (12%)
Query: 26 NTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMF 85
N S F + L+ G C + ++ + C L +L D +P+GI I+ VY +
Sbjct: 182 NAFSTFGLRFILV-TGKGYPDCTTRRIVYRLSVECNLPAYIL--VDADPFGIEIMLVYQY 238
Query: 86 GSKNMAGRNLRLAVPNIKWLGLFPSDLE---KYNIPKLCRQILSKDDISKLKTFLEKGDL 142
GS+ M+ + LA P ++W+GL P++++ K +P LS D KL L + ++
Sbjct: 239 GSQAMSLFSSGLATPMLRWIGLHPTEIDSISKRAVP------LSNYDNKKLIDMLSRSNI 292
Query: 143 VAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
VR +EL ++ + KAEIE++ +L+ Y+P+K +L
Sbjct: 293 SVGVR------QELCRLQQTQLKAEIESV----IDFLSPYYIPTKINRNLYL 334
>gi|299752227|ref|XP_001830783.2| Spo11 [Coprinopsis cinerea okayama7#130]
gi|298409736|gb|EAU91152.2| Spo11 [Coprinopsis cinerea okayama7#130]
Length = 353
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+PYGI IL+VY +GS++M N LA IKWLGL S++ ++++ L+ D
Sbjct: 222 DCDPYGIDILSVYRYGSQSMRHENDTLATRRIKWLGLRISEVMEWDLDPSLLLPLTDYDE 281
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+K+++ L++ L W EL+ G KAEIE L
Sbjct: 282 NKIRSMLKRPHL------PRRWRDELEATQARGRKAEIEVL 316
>gi|198457624|ref|XP_002138430.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
gi|198136050|gb|EDY68988.1| GA24396 [Drosophila pseudoobscura pseudoobscura]
Length = 333
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 41 GAANRTCENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVP 100
G C + ++ C L +L D +P+GI I+ VY GS++M+ + LA P
Sbjct: 195 GKGYPDCSTRRILHRLSTECHLPAYIL--VDADPFGIEIMLVYRLGSQSMSFTSGDLATP 252
Query: 101 NIKWLGLFPSDLEKYNIPKLCRQ--ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQK 158
++W+GL PS+ IP L LS D K+ L + + VR +EL+
Sbjct: 253 TLRWIGLHPSE-----IPALSSGAVALSSGDNKKIDDILARDYIGPGVR------QELRS 301
Query: 159 MSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ + +KAEIE++ +L+ Y+P+K
Sbjct: 302 LQQIQQKAEIESV----IDFLSTDYIPNKI 327
>gi|195150845|ref|XP_002016361.1| GL10528 [Drosophila persimilis]
gi|194110208|gb|EDW32251.1| GL10528 [Drosophila persimilis]
Length = 333
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 19/150 (12%)
Query: 41 GAANRTCENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVP 100
G C + ++ C L +L D +P+GI I+ VY GS++M+ + LA P
Sbjct: 195 GKGYPDCSTRRILHRLSTECHLPAYIL--VDADPFGIEIMLVYRLGSQSMSFTSGDLATP 252
Query: 101 NIKWLGLFPSDLEKYNIPKLCRQ--ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQK 158
++W+GL PS+ IP L LS D K+ L + + VR +EL+
Sbjct: 253 TLRWIGLHPSE-----IPALSSGAVALSSGDNKKIDDILARDYIGPGVR------QELRS 301
Query: 159 MSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ + +KAEIE++ +L+ Y+P+K
Sbjct: 302 LQQIQQKAEIESV----IDFLSTDYIPNKI 327
>gi|157137100|ref|XP_001663887.1| meiotic recombination protein spo11 [Aedes aegypti]
gi|108869811|gb|EAT34036.1| AAEL013701-PA [Aedes aegypti]
Length = 707
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 36 RLIREGAANRTCENKIVI------------LLREIRCKLKKSVLGSFDCNPYGIHILTVY 83
RL+ +G R + IV+ LL++I K + + D +P+GI I VY
Sbjct: 548 RLLDDGILTRLSKKIIVVTSKGYPDVATRLLLKKIWDKHRIPMYALVDADPFGIEIYCVY 607
Query: 84 MFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLV 143
FGS ++ ++ LAVP+I+WLGL PS L L+ D S+++ L +
Sbjct: 608 KFGSLALSHQSSHLAVPSIQWLGLRPSHTVLL---DLKLLPLTPRDESRIRELLRRP--- 661
Query: 144 AFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ E+EL+ + + KAEIE+L YL ++YLP++
Sbjct: 662 YIGQPGCELERELKMLRENNGKAEIESLADISVDYLISEYLPNQL 706
>gi|159905619|ref|YP_001549281.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis C6]
gi|159887112|gb|ABX02049.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus maripaludis C6]
Length = 365
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LAVP + +G+ P D+ Y +P L D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDIIDYELPT---HPLKDHD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ +LK L+ D FV+S W+K L +M+ +AE ++L Y KY+ +YLP+K
Sbjct: 302 VKRLKDGLKNDD---FVKSFPEWQKALNQMADGKVRAEQQSLAKYGLKYVVEEYLPAKVE 358
Query: 190 AED-WL 194
+ WL
Sbjct: 359 DQSTWL 364
>gi|115489640|ref|NP_001067307.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|108862984|gb|ABA99412.2| Type IIB DNA topoisomerase family protein, expressed [Oryza sativa
Japonica Group]
gi|113649814|dbj|BAF30326.1| Os12g0622500 [Oryza sativa Japonica Group]
gi|125537460|gb|EAY83948.1| hypothetical protein OsI_39169 [Oryza sativa Indica Group]
gi|125580120|gb|EAZ21266.1| hypothetical protein OsJ_36918 [Oryza sativa Japonica Group]
gi|150371047|dbj|BAF65347.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
gi|215715276|dbj|BAG95027.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 487
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR ++ + V G D +P GI IL Y GS N A N ++VP+I W+GL SD+
Sbjct: 336 FLRFLKQRTGLPVFGLCDPDPEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMI 395
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
K N+ + LS++D + LK L + DL W++ +++M +KA EA+
Sbjct: 396 KLNLSETNYSRLSREDKTMLKN-LWQDDLSDV------WKRRIEEMISFDKKASFEAIHS 448
Query: 174 YEYKYLANKYLP 185
+ Y A LP
Sbjct: 449 LGFDYFATNLLP 460
>gi|376372946|gb|ACZ58078.2| topoisomerase 6 subunit A [Oryza sativa Japonica Group]
Length = 487
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR ++ + V G D +P GI IL Y GS N A N ++VP+I W+GL SD+
Sbjct: 336 FLRFLKQRTGLPVFGLCDPDPEGISILATYARGSCNSAYDNFNISVPSICWVGLSSSDMI 395
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
K N+ + LS++D + LK L + DL W++ +++M +KA EA+
Sbjct: 396 KLNLSETNYSRLSREDKTMLKN-LWQDDLSDV------WKRRIEEMISFDKKASFEAIHS 448
Query: 174 YEYKYLANKYLP 185
+ Y A LP
Sbjct: 449 LGFDYFATNLLP 460
>gi|297620010|ref|YP_003708115.1| DNA topoisomerase [Methanococcus voltae A3]
gi|297378987|gb|ADI37142.1| DNA topoisomerase (ATP-hydrolyzing) [Methanococcus voltae A3]
Length = 365
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LAVP + +G+ P D+ Y +P L D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPT---HPLKDHD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I +LK L+ D FV+S + W++ L M+ +AE ++L Y KY+ +YLP+K
Sbjct: 302 IKRLKDGLKNDD---FVKSFSDWQQALTMMANSKVRAEQQSLAKYGLKYVVEEYLPAKIE 358
Query: 190 AED-WL 194
+ WL
Sbjct: 359 DQKTWL 364
>gi|428167303|gb|EKX36265.1| meiosis-specific transesterase [Guillardia theta CCMP2712]
Length = 410
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 45 RTCENKIVILL---------REIRCKLKKS-----VLGSFDCNPYGIHILTVYMFGSKNM 90
R C+ + ++L R + +L KS + G D +P G+ I+ Y FGS +
Sbjct: 236 RLCDGRAILLTGCGYPDVQTRILLSRLSKSHPNLPIYGIADWDPDGVEIILTYAFGSHSR 295
Query: 91 AGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNA 150
L P ++WLGL +D++ + +PK R LS D +++ E+ ++ N
Sbjct: 296 EHEREFLRCPTMRWLGLHSNDMKVFGVPKALRLELSSRDRARISRMCER----KVIKENP 351
Query: 151 SWEKELQKMSKEGEKAEIEALDMYEY------KYLANKYLPSKFRAEDWL 194
W EL++M + K EIE L+ L+N Y+ K D+L
Sbjct: 352 RWRNELEEMLIQDSKYEIECLNAISQGGSNSLSNLSNHYIHDKICRFDYL 401
>gi|195122807|ref|XP_002005902.1| GI20732 [Drosophila mojavensis]
gi|193910970|gb|EDW09837.1| GI20732 [Drosophila mojavensis]
Length = 325
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 26 NTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMF 85
N +S F + L+ G C + ++ + C L +L D +P+GI I+ VY
Sbjct: 173 NALSTFGLRFILL-TGKGYPDCTTRRIVYRLTVECNLPAYIL--VDADPFGIEIMLVYQL 229
Query: 86 GSKNMAGRNLRLAVPNIKWLGLFPSDLEKY---NIPKLCRQILSKDDISKLKTFLEKGDL 142
GS+ M LA P ++W+GL PS+++ ++P L++ D K+ L + +L
Sbjct: 230 GSQAMNFSAKSLATPTLRWIGLHPSEIDSISNRSVP------LTQHDNKKIVDILSRSNL 283
Query: 143 VAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
VR +EL ++ + KAEIE++ +L+ Y+P+K
Sbjct: 284 SLGVR------QELCRLQQVQLKAEIESV----IDFLSPYYIPTKI 319
>gi|329766434|ref|ZP_08257978.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|393795494|ref|ZP_10378858.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
BG20]
gi|329137033|gb|EGG41325.1| DNA topoisomerase VI subunit A [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 368
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
IV+ + + + V F I + G A R+ LL+ + ++ V+
Sbjct: 197 IVIAIEKGGLFTRFVEEQVDKKFKSIIINTGGQAPRSTRT----LLKRLHDEMGLPVIVL 252
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR-LAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD 128
D + YG HI V GS N A +LR L VP+ KW+G++ +D+EK+ +P + +++
Sbjct: 253 TDGDVYGEHIAMVIKSGSANAA--HLRELTVPDAKWVGVWATDIEKFKLPTIP---MTES 307
Query: 129 DISKLKTFLEKGDLVAFVR-SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
DI + DL R W+KEL K KAE+EA Y + +KYLP K
Sbjct: 308 DIKRCY------DLQNDPRYQEGIWKKELDVFLKIKRKAELEAFSKYGLTNITDKYLPQK 361
Query: 188 F 188
Sbjct: 362 L 362
>gi|195382444|ref|XP_002049940.1| GJ20469 [Drosophila virilis]
gi|194144737|gb|EDW61133.1| GJ20469 [Drosophila virilis]
Length = 349
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 22 CIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSFDCNPYGIHILT 81
C NT+ FI++ G C + ++ + C L +L D +P+GI I+
Sbjct: 196 CNACNTIGLRFILL----TGKGYPDCTTRRIVHRLSVECNLPAYIL--VDADPFGIEIML 249
Query: 82 VYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGD 141
Y GS+ M+ + LA P ++WLGL PS+++ + + L+K D K+ L +
Sbjct: 250 TYRHGSQAMSFSSKSLATPMLRWLGLHPSEIDSISKRAVA---LTKYDNKKILDILSRSY 306
Query: 142 LVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
+ VR +ELQ + + KAEIE++ +L+ Y+P+K
Sbjct: 307 ISLGVR------QELQTLQRIQFKAEIESV----IDFLSPYYIPTK 342
>gi|110760973|ref|XP_001122679.1| PREDICTED: meiotic recombination protein SPO11 [Apis mellifera]
Length = 400
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++ + KL+ V D +P+GI I+ VY FGS ++ LA N++WLG+ PS+L
Sbjct: 270 MLVKLLSEKLELPVYIIVDADPFGIDIMCVYRFGSAALSRERESLACSNVRWLGVHPSEL 329
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+ L++ D+SKL T LE + A++ EL M K G KAEIE +
Sbjct: 330 LALGVNT---APLTEFDLSKL-TALE-----GRPYTTAAFLGELGVMRKLG-KAEIENVS 379
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
K+L + YLP K + D++
Sbjct: 380 -SSRKFLVSTYLPCKIKGNDYV 400
>gi|45359000|ref|NP_988557.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis S2]
gi|45047875|emb|CAF30993.1| DNA topoisomerase VI A [Methanococcus maripaludis S2]
Length = 419
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
++ + + K +L D +PYG ++I GS +LAVP + +G+ P D+
Sbjct: 282 FIKRLNEEYKLPILVFTDGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDI 341
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
Y +P L DI +LK L+ D FV+S W+ L +M+ +AE ++L
Sbjct: 342 VDYELPT---HPLKDHDIKRLKDGLKNDD---FVKSFPQWQNALVQMADSKVRAEQQSLA 395
Query: 173 MYEYKYLANKYLPSKFR-AEDWL 194
Y KY+ +YLP+K + WL
Sbjct: 396 KYGLKYVVEEYLPAKVEDSSTWL 418
>gi|20093950|ref|NP_613797.1| DNA topoisomerase VI subunit A [Methanopyrus kandleri AV19]
gi|19886903|gb|AAM01727.1| DNA topoisomerase VI, subunit A [Methanopyrus kandleri AV19]
Length = 346
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG HI V GS A N LA P+ K++G+ +D+ +Y++P + L K D
Sbjct: 233 DGDPYGWHIYMVIRSGSAKAAHLNEELACPDAKFIGVTATDIVEYDLPT---EPLKKTDY 289
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+++ + D + + W+KEL + K G+KAE +A Y Y+ +YLP+K
Sbjct: 290 KRIEEL--RRDPRYY---DPFWKKELDLLEKLGKKAEQQAFAKYSLDYVVKEYLPAKL 342
>gi|340624748|ref|YP_004743201.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
gi|339905016|gb|AEK20458.1| DNA topoisomerase VI subunit A [Methanococcus maripaludis X1]
Length = 365
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 71 DCNPYG-IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +PYG ++I GS +LAVP + +G+ P D+ Y +P L D
Sbjct: 245 DGDPYGYLNIYRTLKVGSGKAVHLADKLAVPEARLIGVTPQDIVDYELPT---HPLKDHD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
I +LK L+ D FV+S W+ L +M+ +AE ++L Y KY+ +YLP+K
Sbjct: 302 IKRLKDGLKNDD---FVKSFPQWQNALVQMADSKVRAEQQSLAKYGLKYVVEEYLPAKVE 358
Query: 190 -AEDWL 194
+ WL
Sbjct: 359 DSSTWL 364
>gi|424814408|ref|ZP_18239586.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
gi|339758024|gb|EGQ43281.1| DNA topoisomerase VI, subunit A [Candidatus Nanosalina sp. J07AB43]
Length = 376
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSK--D 128
D +P+G +I +V GS ++A ++ RLA P+ K +G+ D++ Y++ + + K D
Sbjct: 249 DGDPWGYYIYSVLKSGSMSLAFQSDRLATPDAKLIGMTMEDIDAYDLHHVTEDLKGKPED 308
Query: 129 DISKLKTFLEKGDLVAFV-RSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
K F D++ + W+ + QKM +G + E +AL +++AN+YLP K
Sbjct: 309 SGGPTKDFKRIRDVMDYEWMQKDEWQNQFQKMLDKGVRVEQQALASQSLQFVANEYLPKK 368
Query: 188 FRAEDWL 194
+ +L
Sbjct: 369 IEQDQFL 375
>gi|353235119|emb|CCA67136.1| related to Spo11-Coprinopsis cinerea [Piriformospora indica DSM
11827]
Length = 397
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 54 LLREIRCKLKKSV--LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD 111
LL ++ L ++V D +P+GI IL+VY FGS +M +N L + W+G+ ++
Sbjct: 254 LLHKLSSGLPETVPIFALVDADPHGIEILSVYAFGSISMRHQNDGLTAERVVWIGVMLTE 313
Query: 112 LEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
LE+ + L++ D KL++ L + D V W+ EL+ M + G+KAEIEA+
Sbjct: 314 LERRGVAAGDMLGLNQRDRKKLESLLRREDRVM----PQLWKNELRFMLERGQKAEIEAV 369
>gi|328860088|gb|EGG09195.1| hypothetical protein MELLADRAFT_104525 [Melampsora larici-populina
98AG31]
Length = 434
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
DC+P+GI IL+VY FGS M+ + L+V I+W+GL S+ ++ ++ L+K D+
Sbjct: 306 DCDPHGIDILSVYKFGSHKMSFQT-GLSVEKIEWIGLKCSEWKELDLDSHSLLPLTKSDL 364
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYL-ANKYLPSKFR 189
SK + + + L SW EL M + G KAEI+AL ++ K N + F+
Sbjct: 365 SKAEQLISRKGL------PQSWLNELSSMLEMGFKAEIQALLSFKQKVEDPNHRIHQPFQ 418
Query: 190 AEDWL 194
+D L
Sbjct: 419 KDDGL 423
>gi|298713147|emb|CBJ26903.1| Sporulation-specific protein 11 homologue [Ectocarpus siliculosus]
Length = 330
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 62 LKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLC 121
L VLG DCNP+G+ + Y GS + + VP +KW+GL PS L+ ++P
Sbjct: 165 LDLPVLGLVDCNPFGLSVFLQYKEGSSRQGRGSAKFGVPEMKWVGLRPSQLDDLDLPDEV 224
Query: 122 RQILSKDDISKLKT 135
Q LS+ D+S+ ++
Sbjct: 225 HQTLSQQDLSRAQS 238
>gi|430814299|emb|CCJ28443.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 367
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYN---- 116
K +L D +PYGI IL Y +GS A + +A+P+IKW+G+ +D +K
Sbjct: 245 KRSTPILCLVDHDPYGIGILATYKYGSYATAHNSHLMAIPSIKWVGVHSNDFDKTQENGY 304
Query: 117 IPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
IP +SK D+ K L+K +++ + SW EL +M G KAEI+
Sbjct: 305 IP------MSKHDVKKAFELLQK----EWIQDHISWRNELCRMLFTGMKAEIQ 347
>gi|341880355|gb|EGT36290.1| hypothetical protein CAEBREN_32646 [Caenorhabditis brenneri]
Length = 426
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
K K + G FD +P+GI I Y +G+ + VP+I+W+GLFP+D ++ I +
Sbjct: 232 KKKFPIYGLFDADPHGIEIYLTYKYGAIKESAEGRGAFVPSIQWIGLFPTDYNRFIIDRT 291
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM----YEY 176
L + DI K++ + + + + +EL M + K E+EA++M Y
Sbjct: 292 QCLKLKRTDIVKVENLVPR----SIQLGESIVTRELDWMVQHSFKMELEAINMCGPEYMS 347
Query: 177 KYL-ANKYLPSKFRAEDWL 194
+YL A + PS +AE L
Sbjct: 348 RYLIAPRVTPSNLQAEKHL 366
>gi|301122147|ref|XP_002908800.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099562|gb|EEY57614.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 349
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
VLG DCNP+G+ I+ Y GS M +LR AV +IKW+G+ PS + +P + L
Sbjct: 225 VLGLCDCNPFGLSIMLTYKLGSARMPLDSLRYAV-DIKWVGVRPSQVSHLGLPTSSFKAL 283
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGE--KAEIEALDMYEYKYLAN 181
++ D++ + + +F+++NA ++ E+Q + K E+EAL + +L +
Sbjct: 284 TRKDLAVADSLMR----ASFIQANAFFKDEVQMWLGDALPWKIELEALYSSGFTFLTS 337
>gi|359417697|ref|ZP_09209781.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358031946|gb|EHK00766.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 376
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSK--D 128
D +P+G +I +V GS ++A ++ RLA P+ K +G+ D+E+Y + + + K D
Sbjct: 249 DGDPWGYYIYSVLKSGSMSLAFQSDRLATPDAKLIGMTMEDIEEYGLEHVTEDLKGKPED 308
Query: 129 DISKLKTFLEKGDLVAFV-RSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
K + D++ + W+K+L+ M +G + E +AL +++AN+YLP K
Sbjct: 309 SGGPTKDYKRIHDVMDYEWMQKKEWQKQLELMLDKGVRVEQQALAANSLEFVANEYLPEK 368
Query: 188 FRAEDWL 194
E +L
Sbjct: 369 IENETFL 375
>gi|170092549|ref|XP_001877496.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
gi|164647355|gb|EDR11599.1| topoisomerase acting in meiosis [Laccaria bicolor S238N-H82]
Length = 315
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
++ D +PYG+ IL+VY +GS +M + +LA IKWLG++ S+LE I
Sbjct: 210 IMALVDGDPYGLDILSVYKYGSLSMQHESGKLATKRIKWLGIWASELETLGI-------- 261
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNAS----WEKELQKMSKEGEKAEIEAL 171
+D++ + EK L +R + W+KEL M KAEIE L
Sbjct: 262 DRDNLLPISKHDEKKALSMLLRPTSQLPEKWKKELVHMLHSRRKAEIEIL 311
>gi|341880361|gb|EGT36296.1| hypothetical protein CAEBREN_28993 [Caenorhabditis brenneri]
Length = 429
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
K K + G FD +P+GI I Y +G+ + VP+I+W+GLFP+D ++ I +
Sbjct: 232 KKKFPIYGLFDADPHGIEIYLTYKYGAIKESAEGRGAFVPSIQWIGLFPTDYNRFIIDQT 291
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM----YEY 176
L + DI K++ + + + + +EL M + K E+EA++M Y
Sbjct: 292 QCLKLKRTDIVKVENLVPR----SIQLGESIVTRELDWMVQHSFKMELEAINMCGPEYMS 347
Query: 177 KYL-ANKYLPSKFRAEDWL 194
+YL A + PS +AE L
Sbjct: 348 RYLIAPRVTPSNLQAEKHL 366
>gi|189237865|ref|XP_001815524.1| PREDICTED: similar to meiotic recombination protein spo11
[Tribolium castaneum]
Length = 380
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 27/201 (13%)
Query: 13 CLISSAIRICIITNTVSNFFIVI-------RLIREGAANRTCENKIVI------------ 53
LI + I ++ +NF +V+ +L+ E N+ I+I
Sbjct: 188 TLIPYDLDEIIEIHSTANFILVVEKESIFHKLLEEDLPNKLARPFIMITGKGVPDINTRL 247
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L+++ LK V D + YGI I+ Y FG+ + +LAVPN +WLG+FPS++
Sbjct: 248 FLKKLSTMLKLPVFVLVDPDLYGIRIMLNYRFGTITNCHLSEQLAVPNARWLGVFPSEIA 307
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
K+ I Q +++ ++ + L+ ++ ++ EL + G+K IE L +
Sbjct: 308 KFGI---QFQNITQREVKAINETLK----YPYMEAHPKIADELNYLLHSGKKGSIEGL-V 359
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
+L+ YLP K +D++
Sbjct: 360 KNNTFLSEAYLPVKLFNQDFI 380
>gi|282163829|ref|YP_003356214.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
gi|282156143|dbj|BAI61231.1| type II DNA topoisomerase VI subunit A [Methanocella paludicola
SANAE]
Length = 366
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G +I +VY GS N+A + + A P K++GL D+ +++IP+ L+ +D
Sbjct: 247 DMDPWGYYIYSVYKSGSINLAFFSEKAACPRAKYIGLSVKDVREFDIPRSSWVKLNDEDF 306
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+++ E F + W+KEL + K G K E +AL ++ AN YLP+K
Sbjct: 307 KRME---EIASYDWFKKD--KWQKELADLKKFGYKIEQDALVSKSIEFTANNYLPAKIEN 361
Query: 191 EDWL 194
+D+
Sbjct: 362 KDYF 365
>gi|269986172|gb|EEZ92484.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 367
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS-KD- 128
D + +G++I + FGS +A + +L++P K++GL D++KY +L R ++ KD
Sbjct: 248 DGDIWGVYIYSAIKFGSIALAHVSDKLSLPEAKFMGLTMEDIDKY---ELRRHLIKFKDV 304
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
DI+++K + ++N W +EL KM K G K E++A ++ YLP K
Sbjct: 305 DIARIKQIKN----YEWFKNNKKWMEELSKMEKLGAKVELDAFTAKGLSFMTETYLPEKL 360
Query: 189 RAEDWL 194
+ +D+L
Sbjct: 361 KDKDFL 366
>gi|170033806|ref|XP_001844767.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
gi|167874844|gb|EDS38227.1| meiotic recombination protein spo11 [Culex quinquefasciatus]
Length = 411
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+LL++I + + D +P+GI I VY FGS ++ ++ LAVP I+W+G+ PS +
Sbjct: 266 LLLQKIWTTYRIPMFALVDADPFGIEIYCVYKFGSLALSHQSQYLAVPAIRWIGVRPSHI 325
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
L L+ D +++ L++ ++ +EL+ MS+ KAEIE+L
Sbjct: 326 PLL---GLKPLPLNGRDRARIDELLKRP---YIGKAGCELARELRLMSELDVKAEIESLV 379
Query: 173 MYEYKYLANKYLPSKFR 189
YL N YLP++ +
Sbjct: 380 DISTDYLINDYLPAQLK 396
>gi|288930742|ref|YP_003434802.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
gi|288892990|gb|ADC64527.1| DNA topoisomerase (ATP-hydrolyzing) [Ferroglobus placidus DSM
10642]
Length = 360
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
V+ + + +R ++ N F I + +G R+ LL+ + +L V+
Sbjct: 188 VIAVETGGMRDRLVENGFDEKFRAIIVHLKGQPARSTRR----LLKRLNAELNLPVVVFT 243
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P+ K++G+ PSD+ KY++P L+ DI
Sbjct: 244 DGDPWSYRIYASVAYGSIKAAHLSEYLATPSAKFVGIRPSDIVKYDLPS---DKLTDKDI 300
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
LK L W+ E+ + G+K+E +AL Y Y+ + YLP +
Sbjct: 301 QALKAILTDPRF-----DTEFWKNEINLQLELGKKSEQQALAKYGLDYVTDVYLPERL 353
>gi|397583607|gb|EJK52708.1| hypothetical protein THAOC_27988 [Thalassiosira oceanica]
Length = 679
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Query: 33 IVIRLIREGAANRTCENKIV-------------------ILLREIRCKLKKSVLGSFDCN 73
+++ + +EG NR E +I L+ + +L+ V+G DCN
Sbjct: 494 LIVVIEKEGVYNRLSEERIFDRFPCILVTGKGFPDLATRALVHALHHELELPVVGICDCN 553
Query: 74 PYGIHILTVYMFGSKNMA--GRNLRLAVPNIKWLGLFPSDLE--KYNIPKLCRQILSKDD 129
P+G+ +L +Y + + M GR +R +VP I+W+GL PSD++ K +P Q L+ D
Sbjct: 554 PFGVSVLALYCYAGERMGIDGR-MRYSVP-IEWIGLRPSDVDGLKSELPGTVFQRLTDLD 611
Query: 130 ISKLKTFL--EKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
++ + L E F+ +E+Q M + G K E+EAL
Sbjct: 612 RKRITSLLGTENNSNNPFLTEEDG--EEIQLMKERGYKLELEAL 653
>gi|147921703|ref|YP_684477.1| DNA topoisomerase VI subunit A [Methanocella arvoryzae MRE50]
gi|110619873|emb|CAJ35151.1| type II DNA topoisomerase VI, subunit A [Methanocella arvoryzae
MRE50]
Length = 366
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G +I +VY +GS N+A + + A P K+LGL D+ +++P+ L+ +D
Sbjct: 247 DMDPWGYYIYSVYKYGSINLAFFSEKAACPRAKYLGLSVKDVMNFDMPRSSWIKLNDEDH 306
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
++ E + + + W+KEL + K G K E +AL ++ AN YLP+K
Sbjct: 307 KRIAEISE----YPWFKKD-YWQKELTDLKKFGYKIEQDALVSKSIEFTANNYLPTKIEN 361
Query: 191 EDWL 194
+D+
Sbjct: 362 KDFF 365
>gi|383320074|ref|YP_005380915.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
gi|379321444|gb|AFD00397.1| DNA topoisomerase VI, subunit A [Methanocella conradii HZ254]
Length = 365
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G +I +VY GS N+A + + A P K+LGL D+ ++IP+ L+++D
Sbjct: 246 DMDPWGYYIYSVYKSGSINLAFFSEKAACPRAKYLGLSVKDVMDFDIPRSSWVKLNEEDF 305
Query: 131 SKLKTFLEKGDLVAFVR-SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+++ ++ A+ W++EL + K G K E +AL ++ AN YLP+K
Sbjct: 306 KRME------EIAAYPWFKKERWQRELADLKKFGYKIEQDALVSKSIEFTANNYLPTKIS 359
Query: 190 AEDWL 194
D+
Sbjct: 360 NNDYF 364
>gi|45552753|ref|NP_995901.1| meiotic W68 [Drosophila melanogaster]
gi|3599483|gb|AAC61735.1| MEI-W68 [Drosophila melanogaster]
gi|7302468|gb|AAF57553.1| meiotic W68 [Drosophila melanogaster]
gi|289666809|gb|ADD16459.1| RT05903p [Drosophila melanogaster]
Length = 331
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + DL VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEALDMYEYKYLANKYLPSK 187
EIE++ +L + Y+P+K
Sbjct: 308 EIESV----IDFLTDDYIPNK 324
>gi|158287917|ref|XP_309793.4| AGAP010898-PA [Anopheles gambiae str. PEST]
gi|157019418|gb|EAA05541.4| AGAP010898-PA [Anopheles gambiae str. PEST]
Length = 279
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+LL++I + G D +P+GI I VY FGS M + LAVP ++W+GLFPSD+
Sbjct: 147 LLLKKISDWTHVPIYGLMDADPHGIEIFCVYKFGSLAMVHQQRSLAVPTMRWIGLFPSDI 206
Query: 113 E 113
E
Sbjct: 207 E 207
>gi|283778748|ref|YP_003369503.1| DNA topoisomerase [Pirellula staleyi DSM 6068]
gi|283437201|gb|ADB15643.1| DNA topoisomerase (ATP-hydrolyzing) [Pirellula staleyi DSM 6068]
Length = 384
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L + +LK V D +P+G +I +V GS N+A + R+A+P ++LGL D +
Sbjct: 247 MLYRLHNELKLPVYCLLDNDPWGYYIYSVIKQGSINLAYESERMAIPGARYLGLRSLDYD 306
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+ + + L+ DI + K F++ A W+KE++ M K G K E+E+L
Sbjct: 307 RCGLSSSVKIKLNDQDIKRAKQI---ASYPWFIKKKA-WQKEIEMMLKNGFKLEVESLIS 362
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
+ Y+ +Y+P + ++L
Sbjct: 363 KDISYVTEEYVPELLESGEFL 383
>gi|270006719|gb|EFA03167.1| hypothetical protein TcasGA2_TC013087 [Tribolium castaneum]
Length = 936
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 14 LISSAIRICIITNTVSNFFIVI-------RLIREGAANRTCENKIVI------------L 54
LI + I ++ +NF +V+ +L+ E N+ I+I
Sbjct: 745 LIPYDLDEIIEIHSTANFILVVEKESIFHKLLEEDLPNKLARPFIMITGKGVPDINTRLF 804
Query: 55 LREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEK 114
L+++ LK V D + YGI I+ Y FG+ + +LAVPN +WLG+FPS++ K
Sbjct: 805 LKKLSTMLKLPVFVLVDPDLYGIRIMLNYRFGTITNCHLSEQLAVPNARWLGVFPSEIAK 864
Query: 115 YNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMY 174
+ I Q +++ ++ + L+ ++ ++ EL + G+K IE L +
Sbjct: 865 FGIQ---FQNITQREVKAINETLK----YPYMEAHPKIADELNYLLHSGKKGSIEGL-VK 916
Query: 175 EYKYLANKYLPSKFRAEDWL 194
+L+ YLP K +D++
Sbjct: 917 NNTFLSEAYLPVKLFNQDFI 936
>gi|146304518|ref|YP_001191834.1| DNA topoisomerase VI subunit A [Metallosphaera sedula DSM 5348]
gi|145702768|gb|ABP95910.1| DNA topoisomerase (ATP-hydrolyzing) [Metallosphaera sedula DSM
5348]
Length = 386
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG+ D+
Sbjct: 241 FLRRLNEELKLPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDI- 299
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRS----------NASWEKELQKMSKEG 163
+ PK + LS+ + S +F+ K R+ SWE+E+ ++
Sbjct: 300 -FGTPK-KKAYLSERERS---SFIIKAKETDIKRALEIKNYSWFKTKSWEEEINMFLQKK 354
Query: 164 EKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
K EIEA+ K+LA +Y+P K + +D++
Sbjct: 355 AKLEIEAMASKGLKFLAFQYIPEKIQTQDFI 385
>gi|429217560|ref|YP_007175550.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
gi|429134089|gb|AFZ71101.1| DNA topoisomerase VI, subunit A [Caldisphaera lagunensis DSM 15908]
Length = 385
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+R + +LK V D +PYG +I +V+ GS ++ + RLA P K+LG+ SD+
Sbjct: 240 FVRRLHDELKLPVYILTDSDPYGWYIYSVFKVGSIQLSYESERLATPKAKFLGVSMSDIF 299
Query: 114 KYNIPK--LCRQ------ILSKD-DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGE 164
Y K L + I +KD DI + K + ++ S W++E+ +
Sbjct: 300 GYGTKKAYLSEEERRNFIIKAKDVDIKRAKELMR----YSWFHSKL-WKREIDMFMDKKA 354
Query: 165 KAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
K EIEA+ K+LA +Y+P K + DW+
Sbjct: 355 KLEIEAMASKGLKFLAFQYIPEKIQTNDWI 384
>gi|302348021|ref|YP_003815659.1| type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
gi|302328433|gb|ADL18628.1| Type II DNA topoisomerase VI subunit A [Acidilobus saccharovorans
345-15]
Length = 387
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 14/133 (10%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYN--IPKLCRQ----- 123
D +PYG +I +V+ GS ++ + RLA P K+LG+ SD+ Y P L +
Sbjct: 259 DSDPYGWYIYSVFKVGSIQLSYESERLATPKAKFLGVSMSDIFGYGRKKPYLTEEERRNY 318
Query: 124 -ILSKD-DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLAN 181
I +KD DI + K + ++ R+ W++E+ + K EIEA+ K+LA
Sbjct: 319 IIKAKDLDIRRAKELMN----YSWFRT-PLWKREIDMFLDKKAKLEIEAMASKGLKFLAF 373
Query: 182 KYLPSKFRAEDWL 194
+YLP K + DW+
Sbjct: 374 QYLPEKIQTHDWI 386
>gi|325093817|gb|EGC47127.1| meiotic recombination protein spo11 [Ajellomyces capsulatus H88]
Length = 376
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LFPSDLEKYNIPKLCRQIL 125
D +P G+ I++ Y +GS+ A N LAV N++WLG L PS LE L L
Sbjct: 254 DGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASELVPSSLEIQGDDALIP--L 311
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+ D K + L + + A +W +ELQ M KAEIE L YE + +L
Sbjct: 312 TSRDRKKAQDMLGRSPVFAEDGPEPAWRRELQHMLMTNVKAEIEML--YEREGGIETWLD 369
Query: 186 SKFR 189
K +
Sbjct: 370 HKLQ 373
>gi|409044860|gb|EKM54341.1| hypothetical protein PHACADRAFT_96783, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 390
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
DC+P+GI IL+VY +GS +M + L I W G+ D+ + K ++K D
Sbjct: 238 VDCDPWGIDILSVYKYGSASMVHEHKSLVASRIVWGGVRGEDISLLGLNKDAMLPITKHD 297
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
K L + DL W+ ELQ M KAEIE L
Sbjct: 298 QKKAMAILRRTDL------PGEWKTELQHMLHSRRKAEIEVL 333
>gi|195487129|ref|XP_002091779.1| GE12053 [Drosophila yakuba]
gi|194177880|gb|EDW91491.1| GE12053 [Drosophila yakuba]
Length = 331
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G+ I+ VY GS++M+ + L P ++W+GL PS++ + L D
Sbjct: 221 DADPFGVEIMLVYRHGSQSMSFSSQGLTTPALRWIGLHPSEIPALGTVAVA---LVAGDN 277
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
K+ L + DL VR +EL+ + KAEIE++ +L + Y+P+K
Sbjct: 278 KKINDLLARNDLEPGVR------QELRMLQDVQLKAEIESV----VDFLTDDYIPNK 324
>gi|168053052|ref|XP_001778952.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669624|gb|EDQ56207.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 285
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ I+ Y FGS M R V ++KWLGL D Y +P L+ D+
Sbjct: 169 DWNPAGLAIICTYRFGSIRMGLEAPRY-VCDVKWLGLRNRDALTY-VPATAFTSLTDRDM 226
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
++ ++ L ++++ +++E+ +M G+KAEIEAL + Y++LA K++ K
Sbjct: 227 TQARSLLAS----KMLQNHKQYKQEILEMLTFGQKAEIEALYAHGYEFLA-KFITKKIVR 281
Query: 191 EDWL 194
+D++
Sbjct: 282 QDFI 285
>gi|195335887|ref|XP_002034594.1| GM21963 [Drosophila sechellia]
gi|195359309|ref|XP_002045345.1| GM13291 [Drosophila sechellia]
gi|194126564|gb|EDW48607.1| GM21963 [Drosophila sechellia]
gi|194129425|gb|EDW51468.1| GM13291 [Drosophila sechellia]
Length = 331
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 20/143 (13%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GS++M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSQSMSFSSQELTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILS--KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGE 164
L PS+ IP L +++ D K+ L + +L VR +EL+ +
Sbjct: 257 LHPSE-----IPALGTGVVALVAGDNKKINDLLARHNLEPGVR------QELRMLQDVQL 305
Query: 165 KAEIEALDMYEYKYLANKYLPSK 187
KAEIE++ +L + Y+P+K
Sbjct: 306 KAEIESV----IDFLTDDYIPNK 324
>gi|240277734|gb|EER41242.1| meiosis-specific topoisomerase Spo11 [Ajellomyces capsulatus H143]
Length = 380
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LFPSDLEKYNIPKLCRQIL 125
D +P G+ I++ Y +GS+ A N LAV N++WLG L PS LE L L
Sbjct: 258 DGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASELVPSSLEIQGDDALIP--L 315
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+ D K + L + + A +W +ELQ M KAEIE L YE + +L
Sbjct: 316 TSRDRKKAQDMLGRSPVFAEDGPEPAWRRELQHMLMTNVKAEIEML--YEREGGIETWLD 373
Query: 186 SKFR 189
K +
Sbjct: 374 HKLQ 377
>gi|327300939|ref|XP_003235162.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
gi|326462514|gb|EGD87967.1| hypothetical protein TERG_04214 [Trichophyton rubrum CBS 118892]
Length = 387
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----EKYNIPKLCRQILS 126
D +P G+ I++ Y +GS RN L VP+I+W+GL S++ N+P L +S
Sbjct: 266 DSDPDGMAIMSTYKYGSMAQVHRNADLNVPSIQWVGLQASEMMSAASHTNMPSLVP--MS 323
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D K + L++ A +W KELQ M KAE+E L
Sbjct: 324 QHDRKKAEAMLKRNPSFAEDGPEPAWRKELQSMLVMNLKAELEIL 368
>gi|312136519|ref|YP_004003856.1| DNA topoisomerase [Methanothermus fervidus DSM 2088]
gi|311224238|gb|ADP77094.1| DNA topoisomerase (ATP-hydrolyzing) [Methanothermus fervidus DSM
2088]
Length = 353
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L+ + +LK V D +P+G HI V + GS +A N LA PN K+LG+ +D+
Sbjct: 222 FLKRLNEELKLPVYICNDGDPWGFHIAMVIISGSAKLAHVNHELATPNAKFLGVTATDII 281
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++P L + DI +LK L + W +E++KM K +KAE ++
Sbjct: 282 NYDLPT---DPLEEVDIIRLKELLRDPRY-----KDEFWRREIKKMLKIKKKAEQQSFSK 333
Query: 174 YEYKYLANKYLPSKF 188
Y +Y+ + YLP K
Sbjct: 334 YGLEYVVDTYLPEKL 348
>gi|194881359|ref|XP_001974815.1| GG21975 [Drosophila erecta]
gi|190658002|gb|EDV55215.1| GG21975 [Drosophila erecta]
Length = 331
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G+ I+ VY GS++M+ + L P ++W+GL PS++ + L D
Sbjct: 221 DADPFGVEIMLVYRHGSQSMSFSSQGLTTPALRWIGLHPSEIPALGTGAVA---LVAGDN 277
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
K+ L + DL VR +EL+ + KAEIE++ +L + Y+P+K
Sbjct: 278 KKINDLLARHDLEPGVR------QELRMLQDVQLKAEIESV----IDFLTDDYIPNK 324
>gi|15921561|ref|NP_377230.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
gi|22654151|sp|Q971T1.1|TOP6A_SULTO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|15622347|dbj|BAB66339.1| DNA topoisomerase VI subunit A [Sulfolobus tokodaii str. 7]
Length = 387
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL- 112
+R + +LK V D +PYG +I +V+ GS +++ + RLA PN K+LG+ +D+
Sbjct: 242 FVRRLNEELKLPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPNAKFLGVSMTDIF 301
Query: 113 -EKYNIPKLCRQ------ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ P L Q I +KD + +K E + F +W+ E++ + K
Sbjct: 302 GDSNKKPYLSEQERRNYIIKAKD--ADIKRATEIKNYQWF--KTKAWQHEIEIFLNKKSK 357
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ K+LA +Y+P K +++D++
Sbjct: 358 LEIEAMASKGLKFLAFQYIPEKIKSKDYI 386
>gi|374633765|ref|ZP_09706130.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
gi|373523553|gb|EHP68473.1| DNA topoisomerase VI, subunit A [Metallosphaera yellowstonensis
MK1]
Length = 386
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 16/151 (10%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG+ D+
Sbjct: 241 FLRRLNEELKLPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDI- 299
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRS----------NASWEKELQKMSKEG 163
+ P+ + LS+ + S +F+ K R+ SWE+E+ +
Sbjct: 300 -FGTPR-KKPYLSERERS---SFIIKAKETDIKRALEIKNYEWFKTKSWEEEINAFLQRK 354
Query: 164 EKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
K EIEA+ K+LA +Y+P K + +D++
Sbjct: 355 AKLEIEAMASKGLKFLAFQYIPEKIQTKDYI 385
>gi|448591217|ref|ZP_21650896.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
gi|445733773|gb|ELZ85338.1| DNA topoisomerase VI subunit A [Haloferax elongans ATCC BAA-1513]
Length = 366
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + V+C+ + +R +I N + + + + +G R + + +R +L
Sbjct: 189 DHDIDFVMCVETGGMRDRLIENGFDDDYNALIVHLKGQPARATRR----ITKRLRNELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ +++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDARFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
LS DI+ L++ LE ++ W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LSDSDINALESELEDPRFMSDY-----WTEQIELQLDIGKKAEQQALAARGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|119872373|ref|YP_930380.1| DNA topoisomerase VI subunit A [Pyrobaculum islandicum DSM 4184]
gi|119673781|gb|ABL88037.1| Spo11/DNA topoisomerase VI, subunit A, N-terminal domain protein
[Pyrobaculum islandicum DSM 4184]
Length = 367
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 6/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA PN K+LGL +D++ Y I + DI
Sbjct: 249 DGDPYGWYIYSVYKSGSIKLSYESERLATPNAKFLGLTATDIDAYKISDNYVIAANDRDI 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L W KE+ K+ +K EIEAL + K+L + YL K R
Sbjct: 309 KRAQELLRYPWF-----QKPEWTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRN 362
Query: 191 EDWL 194
+ ++
Sbjct: 363 QKFI 366
>gi|225557184|gb|EEH05471.1| meiotic recombination protein spo11 [Ajellomyces capsulatus G186AR]
Length = 377
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LFPSDLEKYNIPKLCRQIL 125
D +P G+ I++ Y +GS+ A N LAV N++WLG L PS LE L L
Sbjct: 255 DGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASELVPSSLEIQGDDALIP--L 312
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+ D K + L + + A +W +ELQ M KAEIE L YE + +L
Sbjct: 313 TSRDRKKAQDMLGRSPVFAEDGPEPTWRRELQHMLMTNVKAEIEML--YEREGGIETWLD 370
Query: 186 SKFRA 190
K +
Sbjct: 371 HKLQT 375
>gi|171185844|ref|YP_001794763.1| DNA topoisomerase VI subunit A [Pyrobaculum neutrophilum V24Sta]
gi|170935056|gb|ACB40317.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum neutrophilum
V24Sta]
Length = 367
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA P+ K+LGL +D++ Y I + DI
Sbjct: 249 DGDPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDAYKISDNYVIAANDRDI 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L F +S W KE+ K+ +K EIEAL + K+L + YL K R
Sbjct: 309 KRAQELLR---YPWFQKSE--WTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRG 362
>gi|195431580|ref|XP_002063814.1| GK15872 [Drosophila willistoni]
gi|194159899|gb|EDW74800.1| GK15872 [Drosophila willistoni]
Length = 346
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
+VL + ++ +++ + N F + ++ G C + ++ + L +L
Sbjct: 176 LVLIVEKESVFESLLSRNIFNSFGIRLILVTGKGYPDCSTRRLVHRLTMEFNLPAYIL-- 233
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +P+GI I+ VY GS+++ + LA P+++W+GL PS++ I LS++D
Sbjct: 234 VDADPFGIEIMLVYRHGSQSLDFTSNLLATPSLRWVGLHPSEICSLAIGGTAP--LSQED 291
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
K+ L + ++ VR +EL K+ + KAEIE++ +L Y+P+K
Sbjct: 292 NKKINDMLNRKNMDLGVR------QELYKLQQMQLKAEIESV----LDFLCGDYIPNK 339
>gi|350404734|ref|XP_003487202.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
impatiens]
Length = 401
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++ + KL+ V D +P+G+ I+ VY FGS ++ LA ++WLG+ PS+L
Sbjct: 271 MLVKLLSEKLELPVYIIVDADPFGVDIMCVYRFGSAALSRERKCLACSKVRWLGIHPSEL 330
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+ + L++ D S+L + + R KEL+ M + G KAEIE +
Sbjct: 331 LALGVNTVP---LTEFDFSRLMALEGRPYMTDAFR------KELEIM-RTG-KAEIENVY 379
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
++LA YLP K + D++
Sbjct: 380 SSSGRFLAATYLPCKIKGNDYI 401
>gi|340721663|ref|XP_003399236.1| PREDICTED: meiotic recombination protein SPO11-like [Bombus
terrestris]
Length = 398
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++ + KL+ V D +P+G+ I+ VY FGS ++ LA ++WLG+ PS+L
Sbjct: 268 MLVKLLSEKLELPVYIIVDADPFGVDIMCVYRFGSAALSRERKCLACSKVRWLGIHPSEL 327
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+ + L++ D S+L + + R KEL+ M + G KAEIE +
Sbjct: 328 LALGVNTVP---LTEFDFSRLMALEGRPYMTDAFR------KELEIM-RTG-KAEIENVY 376
Query: 173 MYEYKYLANKYLPSKFRAEDWL 194
++LA YLP K + D++
Sbjct: 377 SSSGRFLAATYLPCKIKGNDYI 398
>gi|118431159|ref|NP_147432.2| DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
gi|150421694|sp|Q9YE67.2|TOP6A_AERPE RecName: Full=Type II DNA topoisomerase VI subunit A
gi|116062483|dbj|BAA79679.2| type II DNA topoisomerase VI subunit A [Aeropyrum pernix K1]
Length = 389
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+R + +LK V D +PYG +I +VY GS ++ + RLA P K+LG+ +D+
Sbjct: 243 FVRRLHEELKLPVYIITDSDPYGWYIYSVYKVGSITLSYESERLATPKAKFLGVQMTDIF 302
Query: 114 KY--NIPKLCRQILSK-------DDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGE 164
Y P L K DI + K L +++ N W E++ K
Sbjct: 303 GYRGKKPYLSEAERKKFMIKATDKDIKRAKELLN----YSWIGKNRRWNVEIRLFLKHLV 358
Query: 165 KAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
K EIEA+ K+ A +Y+P K DW+
Sbjct: 359 KLEIEAIASKGLKFFAYQYIPEKIETGDWI 388
>gi|195584887|ref|XP_002082235.1| GD11457 [Drosophila simulans]
gi|194194244|gb|EDX07820.1| GD11457 [Drosophila simulans]
Length = 331
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L+ +L D +P+G+ I+ VY GS++M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLEAYIL--VDADPFGVEIMLVYRHGSQSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + +L VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHNLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEALDMYEYKYLANKYLPSK 187
EIE++ +L + Y+P+K
Sbjct: 308 EIESV----IDFLTDDYIPNK 324
>gi|380015951|ref|XP_003691957.1| PREDICTED: meiotic recombination protein SPO11-like [Apis florea]
Length = 404
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+L++ + KL+ V D +P+G+ I+ VY FGS ++ LA N++WLG+ PS+L
Sbjct: 264 MLVKLLSEKLELPVYIIVDADPFGVDIMCVYRFGSAALSRERETLACSNVRWLGIHPSEL 323
Query: 113 EKYNIPKLCRQILSKDDISKLKTFLEKGDLV-AFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ L++ D+SKL + L AF+R E+ M + G KAEIE +
Sbjct: 324 LALGVNT---APLTEFDLSKLTALEGRPYLTGAFLR-------EVGVMRRLG-KAEIENV 372
Query: 172 DMYEYKYLANKYLPSKFRA 190
K+L + YLP K +
Sbjct: 373 S-SSRKFLVSTYLPCKIKG 390
>gi|242080619|ref|XP_002445078.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
gi|241941428|gb|EES14573.1| hypothetical protein SORBIDRAFT_07g003800 [Sorghum bicolor]
Length = 384
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ I+ Y +GS +M + R A N+KWLG+ DL+ IP+ Q+L D+
Sbjct: 271 DWNPAGLAIMCTYKYGSISMGLESYRYAC-NVKWLGMRGDDLQL--IPESAFQVLKPRDL 327
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+L S EL M ++G++A+IEAL + + YL KY+ K
Sbjct: 328 QTCTNYLRPQ------FHQESHRAELTLMVEKGKRADIEALYSHGFDYL-GKYIARKIVQ 380
Query: 191 EDWL 194
D++
Sbjct: 381 GDYI 384
>gi|401398583|ref|XP_003880351.1| unnamed protein product [Neospora caninum Liverpool]
gi|325114761|emb|CBZ50317.1| unnamed protein product [Neospora caninum Liverpool]
Length = 340
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS 126
+G FD P+GI I Y +GSK G +R AV + W+GL DL++ +P R L
Sbjct: 223 VGDFD--PHGISIFLSYQYGSKAFEGPLVRCAV--LHWIGLCSEDLKQ--LPLDVRLCLL 276
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPS 186
D + LK+ L +R+ +++ M + K EIEA+ + YLA Y+PS
Sbjct: 277 NRDRALLKSLLVHPK----IRNCERLKEQCLFMMEHDTKFEIEAITSLGFDYLARYYIPS 332
Query: 187 KFRAEDWL 194
K W+
Sbjct: 333 KILKRTWI 340
>gi|221483092|gb|EEE21416.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
GT1]
Length = 342
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LLR ++ L V FD P+GI I Y GS+ G +R AV + W+GL DLE
Sbjct: 212 LLRRLQMSLNIKVGRYFD--PHGISIFLSYQHGSRAFEGPLVRCAV--LHWIGLCFEDLE 267
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+ +P R L D + LK+ L +R + + M + K EIEA+
Sbjct: 268 Q--LPVDVRLPLLSRDRALLKSLLVHPK----IRDCERLQAQCSFMMEHDTKFEIEAITC 321
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
++YLA Y+PSK W+
Sbjct: 322 LGFEYLARYYIPSKILKRTWI 342
>gi|159042113|ref|YP_001541365.1| DNA topoisomerase VI subunit A [Caldivirga maquilingensis IC-167]
gi|157920948|gb|ABW02375.1| DNA topoisomerase (ATP-hydrolyzing) [Caldivirga maquilingensis
IC-167]
Length = 369
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPK------LCRQI 124
D +PYG +I +VY GS ++ N RLA P+ K++G+ SD+ KY I R I
Sbjct: 251 DGDPYGWYIYSVYRSGSIKLSYENERLATPDAKFIGVTASDISKYKISDNYVIKATDRDI 310
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
++ K F + W++EL + +K EIEAL + K+L ++YL
Sbjct: 311 KRAQELKKYPWF-----------QSHEWKRELDLFLRTRKKVEIEALSTHGLKFL-HEYL 358
Query: 185 PSKFRAEDWL 194
K W+
Sbjct: 359 LDKIHNNKWI 368
>gi|237840215|ref|XP_002369405.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
gi|211967069|gb|EEB02265.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
ME49]
Length = 342
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LLR ++ L V FD P+GI I Y GS+ G +R AV + W+GL DLE
Sbjct: 212 LLRRLQMSLNIEVGRYFD--PHGISIFLSYQHGSRAFEGPLVRCAV--LHWIGLCFEDLE 267
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+ +P R L D + LK+ L +R + + M + K EIEA+
Sbjct: 268 Q--LPVDVRLPLLSRDRALLKSLLVHRK----IRDCERLQAQCSFMMEHDTKFEIEAITC 321
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
++YLA Y+PSK W+
Sbjct: 322 LGFEYLARYYIPSKILKRTWI 342
>gi|124027834|ref|YP_001013154.1| DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM 5456]
gi|166229996|sp|A2BLE8.1|TOP6A_HYPBU RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|123978528|gb|ABM80809.1| Type II DNA topoisomerase VI subunit A [Hyperthermus butylicus DSM
5456]
Length = 387
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNI--PKLCRQ----I 124
D +PYG +I +V+ GS ++ + RLA PN +++G+ +D+ Y P L Q
Sbjct: 259 DADPYGWYIYSVFKIGSITLSYESERLATPNARFIGVSMTDIFGYKSKKPYLTEQERRNF 318
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
+ K + +K E + F W+ E+ ++ K EIEA+ ++LA+KYL
Sbjct: 319 IIKAKEADIKRAYELKNYKWF--QTKKWQIEIDIFLEKKAKLEIEAMTSKGLRFLADKYL 376
Query: 185 PSKFRAEDWL 194
P K DW+
Sbjct: 377 PEKIETGDWI 386
>gi|336384581|gb|EGO25729.1| hypothetical protein SERLADRAFT_437454 [Serpula lacrymans var.
lacrymans S7.9]
Length = 498
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D + YGI IL+VY +GS ++ N +LA ++WLG++ S+L +Y+ L I
Sbjct: 353 ILALVDGDAYGIDILSVYKYGSWSLRHENGKLAAERVEWLGIWTSELAEYDHTNLLLGI- 411
Query: 126 SKDDISKLKTFLEKGDLVAFVRS----NASWEKELQKMSKEGEKAEIEALDMY 174
D + + EK ++ R A W KEL +M KAEIE L +
Sbjct: 412 DIDSMIPITKHDEKKAILMLQRPPETMPAPWRKELMRMLHTRRKAEIEILSAH 464
>gi|424819557|ref|ZP_18244639.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
gi|290559010|gb|EFD92390.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Parvarchaeum
acidophilus ARMAN-5]
gi|326422588|gb|EGD71982.1| DNA topoisomerase VI subunit A [Candidatus Parvarchaeum acidophilus
ARMAN-5_'5-way FS']
Length = 367
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS-KD- 128
D + +GI+I + FGS +A + +L++P K++GL D++KY L R ++ KD
Sbjct: 248 DGDIWGIYIYSAIKFGSIALAHVSDKLSLPEAKFMGLTMEDIDKYG---LRRHLIKFKDV 304
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
DI+++K + ++N W +EL M K G K E++A ++ YLP K
Sbjct: 305 DIARIKQIKN----YDWFKNNKKWMEELNTMEKLGAKVELDAFTAKGLSFMTETYLPEKL 360
Query: 189 RAEDWL 194
+ +++L
Sbjct: 361 KDKNFL 366
>gi|383139990|gb|AFG51276.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
Length = 75
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 116 NIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYE 175
+IP+ CR ++ DI K LE+ FV+ + W EL M K +KAEI+AL +
Sbjct: 1 HIPEQCRLPMTDQDIKTGKDLLEED----FVKKSPGWVDELNLMVKTKQKAEIQALSSFG 56
Query: 176 YKYLANKYLPSKFRAEDWL 194
++YL+ YLP K + DW+
Sbjct: 57 FQYLSEVYLPLKLQQRDWI 75
>gi|332797101|ref|YP_004458601.1| DNA topoisomerase VI subunit A [Acidianus hospitalis W1]
gi|332694836|gb|AEE94303.1| DNA topoisomerase VI, subunit A [Acidianus hospitalis W1]
Length = 386
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+R + +LK V D +PYG +I +V+ GS N++ + RLA PN ++LG+ D+
Sbjct: 241 FVRRLNEELKLPVYIMTDADPYGWYIYSVFRIGSINLSYESERLATPNARFLGVSMGDI- 299
Query: 114 KYNIPKLCRQILSKDD---ISKLKTF-----LEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ PK + ++ I K K + LE + F +W++E+ ++ K
Sbjct: 300 -FGTPKKKAYLTERERNAFIIKAKDYDIKRALEIKNYEWF--KTKAWQEEINMFLQKKAK 356
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ K+LA +Y+P K + D++
Sbjct: 357 LEIEAMASKGLKFLAFQYIPEKIQTNDFI 385
>gi|224006946|ref|XP_002292433.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
gi|220972075|gb|EED90408.1| spo11-like protein [Thalassiosira pseudonana CCMP1335]
Length = 272
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMA--GRNLRLAVPNIKWLGLFPSD 111
L+ + +L V+G D NP+GI +L +Y + M GR ++ VP + W+GL PS
Sbjct: 145 LVNTLHKELDIPVVGICDSNPFGISVLALYYCAGERMGVDGR-MKYTVP-MMWIGLRPST 202
Query: 112 LEKY--NIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
+E ++PK Q L+ D ++ + L++ +L N +E+ KM + G+K E+E
Sbjct: 203 VESLEDDLPKDVFQSLTDLDYKRIDSLLDEDNLFL----NEERYEEIVKMKESGKKVELE 258
Query: 170 ALDMYEYKYLAN 181
AL Y++N
Sbjct: 259 ALYWLGSDYMSN 270
>gi|448576109|ref|ZP_21642152.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
gi|445729789|gb|ELZ81383.1| DNA topoisomerase VI subunit A [Haloferax larsenii JCM 13917]
Length = 366
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 87/184 (47%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + V+C+ + +R +I N + + + + +G R + + +R +L
Sbjct: 189 DHDIDFVMCVETGGMRDRLIENGFDDDYNALIVHLKGQPARATRR----ITKRLRNELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ +++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDARFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
LS DI+ L++ L+ ++ W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LSDSDINALESELDDPRFMSDY-----WTEQIELQLDIGKKAEQQALAARGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|357481549|ref|XP_003611060.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
gi|355512395|gb|AES94018.1| Meiotic recombination protein SPO11-2 [Medicago truncatula]
Length = 390
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D NP G+ IL + FGS M + R A N+KWLGL DL +P L
Sbjct: 264 ILALVDWNPAGLAILCTFKFGSVGMGLESYRYAC-NVKWLGLRGHDLPM--LPDQSFVPL 320
Query: 126 SKDDISKLKTFLEKGDLVAFVRS--NASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
D+ ++ + L N ++++E+ M + G +AEIEAL + Y YL KY
Sbjct: 321 KTKDLQIAQSLMSSRILPVSHSEPLNENYKEEVTLMVESGRRAEIEALYFHGYDYLG-KY 379
Query: 184 LPSKFRAEDWL 194
+ K D++
Sbjct: 380 IAKKIVQSDYI 390
>gi|448562314|ref|ZP_21635353.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|448585464|ref|ZP_21647857.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
gi|445719518|gb|ELZ71198.1| DNA topoisomerase VI subunit A [Haloferax prahovense DSM 18310]
gi|445726164|gb|ELZ77781.1| DNA topoisomerase VI subunit A [Haloferax gibbonsii ATCC 33959]
Length = 366
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + VLC+ + +R ++ N + + V+ + +G R + + + +L
Sbjct: 189 DHDIDFVLCVETGGMRDRLVENGFDDEYNVLIVHLKGQPARATRR----ITKRLHNELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P +++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEHLATPEARFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE ++ W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LADSDINALQSELEDPRFMS-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|356540428|ref|XP_003538691.1| PREDICTED: meiotic recombination protein SPO11-2-like [Glycine max]
Length = 382
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D NP G+ IL + FGS M R A N+KWLGL DL +P L
Sbjct: 264 ILALVDWNPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWLGLRGHDLPL--LPNQSFVPL 320
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
D+ ++ + G L ++++E+ M + G +AEIEAL Y YL KY+
Sbjct: 321 KPKDLQIAQSLMSSGIL------QDNYKEEVALMVQSGRRAEIEALYFNGYDYLG-KYIA 373
Query: 186 SKFRAEDWL 194
K D++
Sbjct: 374 KKIVQSDYV 382
>gi|448361959|ref|ZP_21550572.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
gi|445649639|gb|ELZ02576.1| DNA topoisomerase VI subunit A [Natrialba asiatica DSM 12278]
Length = 363
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + I + G R L + +L V+
Sbjct: 192 VLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARATRR----LTKRFHDELGLPVVVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P ++G+ P+D+ +Y++P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADYIGIQPADIVEYDLPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ LE WE++++ + G+K+E ++L + ++ + YLP + A
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLEIGKKSEQQSLASHGLDFVTDTYLPERLDA 359
>gi|17542064|ref|NP_502081.1| Protein SPO-11 [Caenorhabditis elegans]
gi|3025217|sp|Q22236.1|SPO11_CAEEL RecName: Full=Meiotic recombination protein spo-11
gi|3879464|emb|CAA92974.1| Protein SPO-11 [Caenorhabditis elegans]
Length = 425
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L+ + K K + G FD +P+GI I Y +G VP I+W+GLFP+D
Sbjct: 238 VLKMLSEKRKFPIYGLFDADPHGIEIYLTYKYGPTKEFAEGRGAFVPTIEWIGLFPTDFH 297
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEK----GDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
++ I + L + D K++ + + G++V +EL M + K E+E
Sbjct: 298 RFTIDQSQCLPLVRTDFVKIEKMIPRSIQLGEIVV--------TRELDWMIQNKFKMELE 349
Query: 170 ALDMYEYKYLA 180
+++M +Y+A
Sbjct: 350 SINMCGQEYMA 360
>gi|145592124|ref|YP_001154126.1| DNA topoisomerase VI subunit A [Pyrobaculum arsenaticum DSM 13514]
gi|379003158|ref|YP_005258830.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
gi|145283892|gb|ABP51474.1| Spo11/DNA topoisomerase VI, subunit A [Pyrobaculum arsenaticum DSM
13514]
gi|375158611|gb|AFA38223.1| DNA topoisomerase VI, subunit A [Pyrobaculum oguniense TE7]
Length = 367
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA P K+LGL +D++ Y I + D+
Sbjct: 249 DGDPYGWYIYSVYKSGSIKLSYESERLATPEAKFLGLTATDIDAYKISDNYVIAATDRDV 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ + L F +S W KE+ K+ +K EIEAL + K+L + YL K R
Sbjct: 309 KRAQELLR---YPWFQKS--EWTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIR 361
>gi|448348507|ref|ZP_21537356.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|448369502|ref|ZP_21556054.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
gi|445642874|gb|ELY95936.1| DNA topoisomerase VI subunit A [Natrialba taiwanensis DSM 12281]
gi|445650677|gb|ELZ03593.1| DNA topoisomerase VI subunit A [Natrialba aegyptia DSM 13077]
Length = 363
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 12/180 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + I + G R L + +L V+
Sbjct: 192 VLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARATRR----LTKRFHDELGLPVVVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P ++G+ P+D+ +Y++P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADYIGIQPADIVEYDLPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ LE WE++++ + G+K+E ++L + ++ + YLP + A
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLEIGKKSEQQSLASHGLDFVTDTYLPERLDA 359
>gi|361068647|gb|AEW08635.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139982|gb|AFG51272.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139984|gb|AFG51273.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139986|gb|AFG51274.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139988|gb|AFG51275.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139992|gb|AFG51277.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139994|gb|AFG51278.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139996|gb|AFG51279.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383139998|gb|AFG51280.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140000|gb|AFG51281.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140002|gb|AFG51282.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140004|gb|AFG51283.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140006|gb|AFG51284.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140008|gb|AFG51285.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140010|gb|AFG51286.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140012|gb|AFG51287.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
gi|383140014|gb|AFG51288.1| Pinus taeda anonymous locus CL1001Contig1_01 genomic sequence
Length = 75
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 116 NIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYE 175
+IP+ CR ++ DI K LE+ FV+ + W EL M K KAEI+AL +
Sbjct: 1 HIPEQCRLPMTDQDIKTGKDLLEED----FVKKSPGWVDELNLMVKTKHKAEIQALSSFG 56
Query: 176 YKYLANKYLPSKFRAEDWL 194
++YL+ YLP K + DW+
Sbjct: 57 FQYLSEVYLPLKLQQRDWI 75
>gi|295666744|ref|XP_002793922.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226277575|gb|EEH33141.1| meiotic recombination protein spo11 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 398
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD-- 128
D +P G+ I++ Y +GSK A N L V +I+W GL S++ +PK D
Sbjct: 275 DSDPDGMAIMSTYKYGSKAQAHENNNLTVSDIQWFGLQSSEV----VPKRDAHTQDDDVL 330
Query: 129 ------DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
D K + L + + A +W ELQ M KAEIE L YE + K
Sbjct: 331 IPLTLRDRKKAQDMLARNPVFAEDGPEPAWRAELQHMLMSNVKAEIEVL--YEREEGVEK 388
Query: 183 YLPSKFR 189
+L K R
Sbjct: 389 WLDLKLR 395
>gi|156937842|ref|YP_001435638.1| DNA topoisomerase VI subunit A [Ignicoccus hospitalis KIN4/I]
gi|156566826|gb|ABU82231.1| DNA topoisomerase (ATP-hydrolyzing) [Ignicoccus hospitalis KIN4/I]
Length = 380
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYN--IPKLCRQ--ILS 126
D +PYG +I +V GS N++ + RLA PN K+LG+ SD+ + N PK + I++
Sbjct: 255 DADPYGWYIFSVIRSGSINLSFESERLATPNAKFLGVSMSDVFEKNWLSPKERKNVIIVA 314
Query: 127 KD-DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
KD DI + ++ + +++ W EL+ KE +K EIEAL + K+LA YLP
Sbjct: 315 KDRDIKRAYEMMK----YEWFKNSPKWMHELKLFLKEKKKLEIEALAVKGLKFLAEVYLP 370
Query: 186 SKFRAEDWL 194
K + +DW+
Sbjct: 371 QKIQTKDWI 379
>gi|448609019|ref|ZP_21660298.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
gi|445747396|gb|ELZ98852.1| DNA topoisomerase VI subunit A [Haloferax mucosum ATCC BAA-1512]
Length = 366
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + VLC+ + +R ++ N + + V+ + +G R + + + +L
Sbjct: 189 DHDIDFVLCVETGGMRDRLVENGFDDEYNVLVVHLKGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPEAKFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W+++++ G+KAE +AL ++ +YL
Sbjct: 302 LADSDINALQSELEDPRFM-----TDYWKEQIELQLDIGKKAEQQALAARGLDFVTEEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|209880219|ref|XP_002141549.1| DNA topoisomerase [Cryptosporidium muris RN66]
gi|209557155|gb|EEA07200.1| DNA topoisomerase, putative [Cryptosporidium muris RN66]
Length = 331
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
KLK + L D +P GI+I Y+ GS N +L +A P+I ++G+ D +++P
Sbjct: 206 KLKITTLYLGDYDPPGINIYLTYVRGSDNY--ESLIVACPHIYFMGIHYED--TFDLPCT 261
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
+ L+K+D + L L V++ + + M K G K E+EA +L
Sbjct: 262 TQIPLTKNDKTVLSNLLSD----PIVKACNKLHGQCKMMFKSGYKCELEAFQAISSDFLV 317
Query: 181 NKYLPSKFRAEDWL 194
N YLP+K W+
Sbjct: 318 NSYLPNKLLKRSWI 331
>gi|154285542|ref|XP_001543566.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407207|gb|EDN02748.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 420
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LFPSDLEKYNIPKLCRQIL 125
D +P G+ I++ Y +GS+ A N LAV N++WLG L PS LE L L
Sbjct: 298 DGDPDGMAIMSTYKYGSRAQAHDNTNLAVHNVQWLGLQASELVPSSLEIQGDDALIP--L 355
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+ D K + L + + A +W ELQ M KAEIE L YE + +L
Sbjct: 356 TSRDRKKAQDMLGRSPVFAEDGPEPAWRWELQHMLMTNVKAEIEML--YEREGGIETWLD 413
Query: 186 SKFRA 190
K +
Sbjct: 414 HKLQT 418
>gi|53125146|emb|CAE53723.1| topoisomerase 6 subunit A [Oryza sativa Indica Group]
Length = 385
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLGL DL+ IP+ Q L D+
Sbjct: 272 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGLRGDDLQL--IPQSAYQELKPRDL 328
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ L L R+ EL M + G++AEIEAL + + +L KY+ K
Sbjct: 329 QIAKSLLSSKFLQDKHRA------ELTLMLETGKRAEIEALYSHGFDFL-GKYVARKIVQ 381
Query: 191 EDWL 194
D++
Sbjct: 382 GDYI 385
>gi|115474861|ref|NP_001061027.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|37805855|dbj|BAC99506.1| putative SPO11 protein [Oryza sativa Japonica Group]
gi|113622996|dbj|BAF22941.1| Os08g0156900 [Oryza sativa Japonica Group]
gi|150371043|dbj|BAF65345.1| topoisomerase Spo11 [Oryza sativa Japonica Group]
Length = 385
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLGL DL+ IP+ Q L D+
Sbjct: 272 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGLRGDDLQL--IPQSAYQELKPRDL 328
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ L L R+ EL M + G++AEIEAL + + +L KY+ K
Sbjct: 329 QIAKSLLSSKFLQDKHRA------ELTLMLETGKRAEIEALYSHGFDFL-GKYVARKIVQ 381
Query: 191 EDWL 194
D++
Sbjct: 382 GDYI 385
>gi|315048665|ref|XP_003173707.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
gi|311341674|gb|EFR00877.1| meiotic recombination protein spo11 [Arthroderma gypseum CBS
118893]
Length = 387
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----EKYNIPKLCRQILS 126
D +P G+ I++ Y +GS RN L VP+I+W+GL S++ N P L +S
Sbjct: 266 DRDPDGMAIMSTYKYGSMAQLHRNANLNVPSIRWVGLQASEMISTVHPRNTPSLVP--MS 323
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D K + L++ A +W KELQ M KAE+E L
Sbjct: 324 QRDRKKAEAMLKRNPSFAEDGPEPTWRKELQSMLVMNVKAELEIL 368
>gi|221504024|gb|EEE29701.1| meiotic recombination protein SPO11, putative [Toxoplasma gondii
VEG]
Length = 342
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LLR ++ L V FD P+GI I Y GS+ G +R AV + W+GL DLE
Sbjct: 212 LLRCLQMSLNIEVGRYFD--PHGISIFLSYQHGSRAFEGPLVRCAV--LHWIGLCFEDLE 267
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+ +P R L D + LK+ L +R + + M + K EIEA+
Sbjct: 268 Q--LPVDVRLPLLSRDRALLKSLLVHPK----IRDCERLQAQCSFMMEHDTKFEIEAITC 321
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
++YLA Y+PSK W+
Sbjct: 322 LGFEYLARYYIPSKILKRTWI 342
>gi|37805856|dbj|BAC99507.1| putative SPO11 protein [Oryza sativa Japonica Group]
Length = 363
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLGL DL+ IP+ Q L D+
Sbjct: 250 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGLRGDDLQL--IPQSAYQELKPRDL 306
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ L L R+ EL M + G++AEIEAL + + +L KY+ K
Sbjct: 307 QIAKSLLSSKFLQDKHRA------ELTLMLETGKRAEIEALYSHGFDFL-GKYVARKIVQ 359
Query: 191 EDWL 194
D++
Sbjct: 360 GDYI 363
>gi|218200496|gb|EEC82923.1| hypothetical protein OsI_27876 [Oryza sativa Indica Group]
Length = 503
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLGL DL+ IP+ Q L D+
Sbjct: 390 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGLRGDDLQL--IPQSAYQELKPRDL 446
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ L L R+ EL M + G++AEIEAL + + +L KY+ K
Sbjct: 447 QIAKSLLSSKFLQDKHRA------ELTLMLETGKRAEIEALYSHGFDFL-GKYVARKIVQ 499
Query: 191 EDWL 194
D++
Sbjct: 500 GDYI 503
>gi|268536302|ref|XP_002633286.1| C. briggsae CBR-SPO-11 protein [Caenorhabditis briggsae]
Length = 381
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+ G FD +P+GI I Y +G+ VP+I+W+GLFP+D + + I K + L
Sbjct: 205 IYGLFDADPHGIEIYLTYKYGATKETAEGRGAFVPSIQWIGLFPTDFKNFFIDKSQQLPL 264
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
+ D K++ + + + + S +EL M + K E+E+++M +Y+ +YL
Sbjct: 265 IRSDYVKIENLIPRSIQLGEI----SVTRELDYMIQNPLKFELESINMCGPEYMG-RYL 318
>gi|18313188|ref|NP_559855.1| DNA topoisomerase VI subunit A [Pyrobaculum aerophilum str. IM2]
gi|18160702|gb|AAL64037.1| DNA topoisomerase VI (type II ) subunit a [Pyrobaculum aerophilum
str. IM2]
Length = 367
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 6/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA P+ K+LGL +D++ Y I + DI
Sbjct: 249 DGDPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDTYKISDNYVIAANDRDI 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L W +E+ K+ +K EIEAL + K+L + YL K R+
Sbjct: 309 KRAQELLRYPWF-----QKPEWTREINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRS 362
Query: 191 EDWL 194
+ ++
Sbjct: 363 KKFI 366
>gi|410720325|ref|ZP_11359681.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
gi|410601107|gb|EKQ55627.1| DNA topoisomerase VI, subunit A [Methanobacterium sp. Maddingley
MBC34]
Length = 351
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G HI V + GS +A N +LA P+ K+LG+ SD+ Y++P L D+
Sbjct: 238 DGDPWGFHIAMVIISGSAKLAHVNHQLATPDAKFLGVTASDIINYDLPT---DPLKDIDV 294
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+LK + + +W+ E++KM K G+KAE ++ Y +Y+ + YLP K +
Sbjct: 295 LRLKELSKDPRY-----KDEAWQMEIKKMIKIGKKAEQQSFSKYGLEYVVDTYLPEKLES 349
>gi|449546513|gb|EMD37482.1| hypothetical protein CERSUDRAFT_49779 [Ceriporiopsis subvermispora
B]
Length = 349
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSK-D 128
D + YGI IL+VY GS +M +LA ++WLGL+ S+L I + ++K D
Sbjct: 195 VDGDAYGIDILSVYKRGSTSMLHERDKLAAGRVRWLGLWTSELAGLGIDRDALIPMTKHD 254
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ K T L + DL W KELQ M KAEIE L
Sbjct: 255 EKKKAMTMLRRPDL------PRKWRKELQYMLHNRRKAEIEIL 291
>gi|425773684|gb|EKV12019.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum Pd1]
gi|425775995|gb|EKV14234.1| Meiosis-specific topoisomerase Spo11, putative [Penicillium
digitatum PHI26]
Length = 386
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI----LS 126
D +P+G+ I++ Y +GS +N RL++P ++WLGL +D+ +P++ L+
Sbjct: 265 DGDPHGMAIMSTYKYGSAAHLHQNARLSIPRLQWLGLRVTDI--IAVPEVLGDTALLSLT 322
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D K+ L + A W ELQ+M KAEIE L
Sbjct: 323 MQDRKKIMAMLRNSPVWASDGPEPEWRAELQRMMILNLKAEIEIL 367
>gi|448540823|ref|ZP_21623744.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|448549126|ref|ZP_21627902.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|448555700|ref|ZP_21631629.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
gi|445708976|gb|ELZ60811.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-646]
gi|445713815|gb|ELZ65590.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-645]
gi|445717223|gb|ELZ68941.1| DNA topoisomerase VI subunit A [Haloferax sp. ATCC BAA-644]
Length = 366
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + V+C+ + +R ++ N + + + + G R + + + +L
Sbjct: 189 EHDIDFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LADSDINALQSELEDPRFMG-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|292655720|ref|YP_003535617.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|448289706|ref|ZP_21480869.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|291370288|gb|ADE02515.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
gi|445581223|gb|ELY35584.1| DNA topoisomerase VI subunit A [Haloferax volcanii DS2]
Length = 366
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + V+C+ + +R ++ N + + + + G R + + + +L
Sbjct: 189 EHDIDFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LADSDINALQSELEDPRFMG-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|323139266|ref|ZP_08074320.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
gi|322395487|gb|EFX98034.1| DNA topoisomerase (ATP-hydrolyzing) [Methylocystis sp. ATCC 49242]
Length = 377
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 5/119 (4%)
Query: 71 DCNPYGI-HILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
DC+PYG +I GS N A N L VP ++LG+ P D+ + + + L+ D
Sbjct: 255 DCDPYGFTNIYRTLKAGSGNAAHVNRFLCVPRARFLGVTPQDIIDFGL-QDATHPLTPVD 313
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ + K L F+ ++ W ++++ G +AE +AL + Y+ ++YLP K
Sbjct: 314 VKRAKDALSND---PFIIAHPQWTAAIRQLLDMGVRAEQQALAKWGLNYVIDEYLPRKL 369
>gi|448570959|ref|ZP_21639470.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
gi|445722877|gb|ELZ74528.1| DNA topoisomerase VI subunit A [Haloferax lucentense DSM 14919]
Length = 366
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + V+C+ + +R ++ N + + + + G R + + + +L
Sbjct: 189 EHDIEFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LADSDINALQSELEDPRFMG-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|433426699|ref|ZP_20406922.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
gi|432196864|gb|ELK53285.1| DNA topoisomerase VI subunit A, partial [Haloferax sp. BAB2207]
Length = 192
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + V+C+ + +R ++ N + + + + G R + + + +L
Sbjct: 21 EHDVEFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARATRR----ITKRLHDELDL 76
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ K++G+ P D+ Y++P
Sbjct: 77 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPT---DP 133
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W ++++ G+KAE +AL ++ ++YL
Sbjct: 134 LADSDINALESELEDPRFMG-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 188
Query: 185 PSKF 188
P++
Sbjct: 189 PTRL 192
>gi|222639941|gb|EEE68073.1| hypothetical protein OsJ_26101 [Oryza sativa Japonica Group]
Length = 420
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLGL DL+ IP+ Q L D+
Sbjct: 307 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGLRGDDLQL--IPQSAYQELKPRDL 363
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ L L R+ EL M + G++AEIEAL + + +L KY+ K
Sbjct: 364 QIAKSLLSSKFLQDKHRA------ELTLMLETGKRAEIEALYSHGFDFL-GKYVARKIVQ 416
Query: 191 EDWL 194
D++
Sbjct: 417 GDYI 420
>gi|448595855|ref|ZP_21653302.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
gi|445742309|gb|ELZ93804.1| DNA topoisomerase VI subunit A [Haloferax alexandrinus JCM 10717]
Length = 366
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + V+C+ + +R ++ N + + + + G R + + + +L
Sbjct: 189 EHDVEFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPDAKFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LADSDINALQSELEDPRFMG-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|389739919|gb|EIM81111.1| DNA topoisomerase IV alpha subunit [Stereum hirsutum FP-91666 SS1]
Length = 406
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D + YGI I++VY FGS+ + + RLA ++ +GL+ S+L + I +
Sbjct: 254 ILALVDGDAYGIDIVSVYKFGSQALKHESERLAAERVQCIGLWSSELGELGIDNSSLLQI 313
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
S D K + L + D + +R W+KELQ M KAEIE L
Sbjct: 314 SAADEKKARNLLLRADPLLPMR----WKKELQSMLFTRRKAEIEIL 355
>gi|126459556|ref|YP_001055834.1| DNA topoisomerase VI subunit A [Pyrobaculum calidifontis JCM 11548]
gi|126249277|gb|ABO08368.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Pyrobaculum
calidifontis JCM 11548]
Length = 367
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA P K+LGL +D++ Y I + D+
Sbjct: 249 DGDPYGWYIYSVYKSGSIKLSYESERLATPEAKFLGLTATDIDAYKISDNYVIAANDRDV 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L W KE+ K+ +K EIEAL + K+L + YL K R
Sbjct: 309 KRAQELLRYPWF-----QKPEWTKEINLFLKKKKKVEIEALSTHGLKFLHD-YLRDKIRG 362
>gi|307105917|gb|EFN54164.1| hypothetical protein CHLNCDRAFT_135583 [Chlorella variabilis]
Length = 423
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
++G D NP G +IL VY FGS M G + A+ + WLG S L++ + Q L
Sbjct: 303 LVGLVDWNPAGANILCVYRFGSARM-GESQHYALRTLGWLGARSSQLQQADAGAF--QEL 359
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNA-SWEKELQKMSKEGEKAEIEALDMYE 175
+ D S +L A +R A W EL +M G KAEIEAL+ E
Sbjct: 360 TARDRSM------AANLSAVLRGAAPEWAAELGRMLSSGSKAEIEALETGE 404
>gi|261202302|ref|XP_002628365.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239590462|gb|EEQ73043.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
SLH14081]
gi|239612183|gb|EEQ89170.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis
ER-3]
Length = 395
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD----LEKYNIPKLCRQILS 126
D +P GI I++ Y +GS+ A N L V ++WLGL S+ +E Y L+
Sbjct: 268 DSDPDGIAIMSTYKYGSRAQAHDNPNLTVNKMQWLGLQSSEVASRIEVYQQDDDVLIPLT 327
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPS 186
D K + L + + A +W ELQ M KAEIE L YE ++ ++L
Sbjct: 328 SRDRKKAQDMLSRSPVFAEDGPEPAWRGELQHMLMSNVKAEIEIL--YEREWGIERWLDR 385
Query: 187 KFR 189
K +
Sbjct: 386 KLQ 388
>gi|389847082|ref|YP_006349321.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|448614969|ref|ZP_21663997.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|388244388|gb|AFK19334.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
gi|445753056|gb|EMA04475.1| DNA topoisomerase VI subunit A [Haloferax mediterranei ATCC 33500]
Length = 366
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + VLC+ + +R +I N + V+ + +G R + + + +L
Sbjct: 189 DHDIDFVLCVETGGMRDRLIENGFDEQYNVLIVHLKGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W+++++ G+KAE +AL ++ +YL
Sbjct: 302 LADSDINALQSELEDPRFM-----TDYWKEQIELQLDIGKKAEQQALAARGLDFVTEEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|194755593|ref|XP_001960068.1| GF11715 [Drosophila ananassae]
gi|190621366|gb|EDV36890.1| GF11715 [Drosophila ananassae]
Length = 330
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+GI I+ VY GS+ M+ + P+++W+GL PS++ + L D
Sbjct: 220 DADPFGIEIMLVYRHGSQAMSFSSRGYTTPSLRWIGLHPSEIAALGGGAVA---LGTGDN 276
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ L + L A VR +E+Q KAEIE++ +L+ Y+P+K +
Sbjct: 277 KKINDLLARSGLEAGVRQELRMLREVQL------KAEIESV----ICFLSEDYIPNKIKR 326
Query: 191 EDWL 194
+ +L
Sbjct: 327 KLFL 330
>gi|330834337|ref|YP_004409065.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
gi|329566476|gb|AEB94581.1| DNA topoisomerase VI subunit A [Metallosphaera cuprina Ar-4]
Length = 386
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LR + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG+ D+
Sbjct: 241 FLRRLNEELKLPVYILTDADPYGWYIYSVFRIGSISLSYESERLATPDAKFLGVSMGDI- 299
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRS----------NASWEKELQKMSKEG 163
+ P+ + LS+ + S +F+ K R+ WE+E+ +
Sbjct: 300 -FGTPR-KKPYLSERERS---SFIIKAKETDIKRALEIKNYDWFKTKGWEEEINIFLQRK 354
Query: 164 EKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
K EIEA+ K+LA +Y+P K + +D++
Sbjct: 355 SKLEIEAMASKGLKFLAFQYIPEKIQTKDFI 385
>gi|327354903|gb|EGE83760.1| meiosis-specific topoisomerase Spo11 [Ajellomyces dermatitidis ATCC
18188]
Length = 403
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD----LEKYNIPKLCRQILS 126
D +P GI I++ Y +GS+ A N L V ++WLGL S+ +E Y L+
Sbjct: 276 DSDPDGIAIMSTYKYGSRAQAHDNPNLTVNKMQWLGLQSSEVASRIEVYQQDDDVLIPLT 335
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPS 186
D K + L + + A +W ELQ M KAEIE L YE ++ ++L
Sbjct: 336 SRDRKKAQDMLSRSPVFAEDGPEPAWRGELQHMLMSNVKAEIEIL--YEREWGIERWLDR 393
Query: 187 KFR 189
K +
Sbjct: 394 KLQ 396
>gi|209945760|gb|ACI97111.1| meiotic W68 [Drosophila melanogaster]
gi|209945762|gb|ACI97112.1| meiotic W68 [Drosophila melanogaster]
gi|209945764|gb|ACI97113.1| meiotic W68 [Drosophila melanogaster]
gi|209945766|gb|ACI97114.1| meiotic W68 [Drosophila melanogaster]
gi|209945770|gb|ACI97116.1| meiotic W68 [Drosophila melanogaster]
gi|209945772|gb|ACI97117.1| meiotic W68 [Drosophila melanogaster]
gi|209945774|gb|ACI97118.1| meiotic W68 [Drosophila melanogaster]
gi|209945776|gb|ACI97119.1| meiotic W68 [Drosophila melanogaster]
gi|209945778|gb|ACI97120.1| meiotic W68 [Drosophila melanogaster]
gi|209945780|gb|ACI97121.1| meiotic W68 [Drosophila melanogaster]
gi|209945782|gb|ACI97122.1| meiotic W68 [Drosophila melanogaster]
gi|209945784|gb|ACI97123.1| meiotic W68 [Drosophila melanogaster]
gi|209945786|gb|ACI97124.1| meiotic W68 [Drosophila melanogaster]
gi|209945788|gb|ACI97125.1| meiotic W68 [Drosophila melanogaster]
gi|209945794|gb|ACI97128.1| meiotic W68 [Drosophila melanogaster]
gi|209945796|gb|ACI97129.1| meiotic W68 [Drosophila melanogaster]
gi|209945802|gb|ACI97132.1| meiotic W68 [Drosophila melanogaster]
gi|209945804|gb|ACI97133.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + DL VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|209945768|gb|ACI97115.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + DL VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|336371828|gb|EGO00168.1| hypothetical protein SERLA73DRAFT_107163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 296
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D + YGI IL+VY +GS ++ N +LA ++WLG++ S+L I +
Sbjct: 158 ILALVDGDAYGIDILSVYKYGSWSLRHENGKLAAERVEWLGIWTSELADLGIDIDSMIPI 217
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMY 174
+K D K L++ A W KEL +M KAEIE L +
Sbjct: 218 TKHDEKKAILMLQRPPETM----PAPWRKELMRMLHTRRKAEIEILSAH 262
>gi|209945800|gb|ACI97131.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + DL VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|209945758|gb|ACI97110.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + DL VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|70607073|ref|YP_255943.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449067312|ref|YP_007434394.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449069582|ref|YP_007436663.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
gi|68567721|gb|AAY80650.1| DNA topoisomerase VI, subunit A [Sulfolobus acidocaldarius DSM 639]
gi|449035820|gb|AGE71246.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius N8]
gi|449038090|gb|AGE73515.1| DNA topoisomerase VI subunit A [Sulfolobus acidocaldarius Ron12/I]
Length = 386
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL- 112
+R + +LK V D +PYG +I +V+ GS +++ + RLA PN ++LG+ +D+
Sbjct: 241 FVRRLNEELKLPVYILTDADPYGWYIYSVFKIGSISLSYESERLATPNARFLGVSMTDIF 300
Query: 113 -EKYNIPKLCRQ------ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+K P L Q I +KD + +K +E + F W+ E+ + K
Sbjct: 301 GDKGKKPYLSDQERRNYIIKAKD--ADVKRAMEIKNYEWF--KTKGWQHEISVFLDKKSK 356
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ ++LA +Y+P K + D++
Sbjct: 357 LEIEAMASKGLRFLAFQYIPEKIKNSDFI 385
>gi|209945798|gb|ACI97130.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + DL VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|448603024|ref|ZP_21656845.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
gi|445746220|gb|ELZ97682.1| DNA topoisomerase VI subunit A [Haloferax sulfurifontis ATCC
BAA-897]
Length = 366
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + V+C+ + +R ++ N + + + + G R + + + +L
Sbjct: 189 EHDIDFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPEAKFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LADSDINALQSELEDPRFMG-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|257388767|ref|YP_003178540.1| DNA topoisomerase [Halomicrobium mukohataei DSM 12286]
gi|257171074|gb|ACV48833.1| DNA topoisomerase (ATP-hydrolyzing) [Halomicrobium mukohataei DSM
12286]
Length = 366
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + I + G R L + + +L V+
Sbjct: 195 VLCVETGGMRDRLVENGFDDEYDSIVVHLGGQPARATRR----LTKRLHDELDLPVVVFT 250
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS DI
Sbjct: 251 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIRPEDIVEYDLPT---DPLSDSDI 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E +AL ++ + YLP +
Sbjct: 308 NALESELEDPRF-----QTEFWEEQIELQLDIGKKSEQQALASRGLDFVTDTYLPERL 360
>gi|255949132|ref|XP_002565333.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592350|emb|CAP98697.1| Pc22g14090 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 368
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI----LS 126
D +P+G+ I++ Y +GS +N RL++P ++WLGL SD+ +P++ L+
Sbjct: 247 DGDPHGMAIMSTYKYGSAANLHQNARLSIPRLQWLGLRVSDI--IAVPEVLGDTALLSLT 304
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D K+ L + A W ELQ+M KAEIE L
Sbjct: 305 MRDRKKIMAMLRNSPVWASDGPEPEWRAELQRMLVLNLKAEIEIL 349
>gi|303276490|ref|XP_003057539.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
gi|226461891|gb|EEH59184.1| type II DNA topoisomerase VI subunit A 1 [Micromonas pusilla
CCMP1545]
Length = 409
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D NP G+ IL Y GS A R A+ ++KWLG+ +DLE+ + RQ L
Sbjct: 289 MLALVDWNPSGLLILRTYRAGSSGGALEASRYAL-DVKWLGVRRADLERVD--ARARQPL 345
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
++ D +K+K L + AS EL+ M + G KAEIE+L
Sbjct: 346 TELDKAKIKNMLA-------AETGASQASELRAMLESGMKAEIESL 384
>gi|195653947|gb|ACG46441.1| meiotic recombination protein SPO11 [Zea mays]
gi|223973125|gb|ACN30750.1| unknown [Zea mays]
Length = 382
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLG+ DL + IP+ Q L D+
Sbjct: 269 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGVRGGDL--HLIPEDAFQELKPRDL 325
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ + L S EL M + G++A+IEAL + + +L KY+ K
Sbjct: 326 QIAKSLMSSKFL------QESHRAELALMVERGKRADIEALYSHGFDFL-GKYIARKIVQ 378
Query: 191 EDWL 194
D++
Sbjct: 379 GDYI 382
>gi|374325958|ref|YP_005084158.1| DNA topoisomerase [Pyrobaculum sp. 1860]
gi|356641227|gb|AET31906.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrobaculum sp. 1860]
Length = 367
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA P+ K+LGL +D++ Y I + DI
Sbjct: 249 DGDPYGWYIYSVYKSGSIKLSYESERLATPDAKFLGLTATDIDAYKISDNYVIAANDRDI 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L W +E+ ++ +K EIEAL + K+L + YL K R
Sbjct: 309 KRAQELLRYPWF-----QKPEWTREVNLFLRKKKKVEIEALSTHGLKFLHD-YLRDKIRG 362
>gi|291333565|gb|ADD93260.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C82]
Length = 366
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +P+ I +G+ A + LA P +LG+ D+E Y++P DD
Sbjct: 250 LDGDPWSFRIFASIAYGAIKTAHISEYLATPTATYLGITSDDIEAYDLPS--------DD 301
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+S K +L ++A W++++ M + G+KAE ++L Y ++ + YLP K
Sbjct: 302 LSSRDVDALKAELSDPRFADAWWQEQINMMLELGKKAEQQSLAKYGLDFVTDTYLPEKL 360
>gi|448318072|ref|ZP_21507608.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
gi|445600500|gb|ELY54508.1| DNA topoisomerase VI subunit A, partial [Natronococcus jeotgali DSM
18795]
Length = 251
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + I + G R L + +L V+
Sbjct: 80 VLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARATRR----LTKRFHDELDLPVVVFT 135
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P K++G+ P+D+ +Y++P LS D+
Sbjct: 136 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPADIVEYDLPT---DPLSDSDV 192
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ + G+K+E ++L ++ + YLP +
Sbjct: 193 NALESELEDPRF-----QTDYWEEQIELQLEIGKKSEQQSLASRGLDFVTDTYLPERL 245
>gi|238908556|gb|ACF79646.2| unknown [Zea mays]
Length = 353
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLG+ DL + IP+ Q L D+
Sbjct: 240 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGVRGGDL--HLIPEDAFQELKPRDL 296
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K+ + L S EL M + G++A+IEAL + + +L KY+ K
Sbjct: 297 QIAKSLMSSKFL------QESHRAELALMVERGKRADIEALYSHGFDFL-GKYIARKIVQ 349
Query: 191 EDWL 194
D++
Sbjct: 350 GDYI 353
>gi|398393738|ref|XP_003850328.1| hypothetical protein MYCGRDRAFT_45713, partial [Zymoseptoria
tritici IPO323]
gi|339470206|gb|EGP85304.1| hypothetical protein MYCGRDRAFT_45713 [Zymoseptoria tritici IPO323]
Length = 272
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL-EKYNIPKLCRQI 124
V G D +P G+ IL+ Y GSK +A + +VP ++WLGL S L P+ ++
Sbjct: 149 VFGLADFDPDGVAILSTYKHGSKALAHESDGHSVPQLQWLGLKSSHLPHDERNPQGVLKL 208
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
S+D K + LE+ VR + W+ EL++M KAE++ LD
Sbjct: 209 TSRDR-RKARAMLEQ-QHTPDVRLDEEWQSELRQMLMLNVKAELQILD 254
>gi|257051217|ref|YP_003129050.1| DNA topoisomerase VI subunit A [Halorhabdus utahensis DSM 12940]
gi|256689980|gb|ACV10317.1| DNA topoisomerase (ATP-hydrolyzing) [Halorhabdus utahensis DSM
12940]
Length = 370
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + + G R L + + +L V
Sbjct: 199 VLCVETGGMRDRLVENGFDDEYNALVVHLGGQPARATRR----LTKRLHDELDLPVTVFT 254
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P L+ DI
Sbjct: 255 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFIGVQPEDIVEYDLPT---DPLADSDI 311
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ LE WE++++ +K+E +AL Y ++ + YLP + A
Sbjct: 312 NALESELEDPRF-----QTDYWEEQIELQLDIDKKSEQQALASYGLDFVTDTYLPERLEA 366
>gi|297836981|ref|XP_002886372.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
gi|297332213|gb|EFH62631.1| hypothetical protein ARALYDRAFT_474957 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D NP G+ IL + FGS M R A N+KW+GL DL IP L
Sbjct: 265 ILALVDWNPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWIGLRGDDLNL--IPDESLVPL 321
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
D K+ L L ++ EL M + G++AEIEAL + Y YL KY+
Sbjct: 322 KPKDSQIAKSLLSSKIL------QDNYRDELSLMVQTGKRAEIEALYCHGYNYLG-KYIA 374
Query: 186 SK 187
+K
Sbjct: 375 TK 376
>gi|302806102|ref|XP_002984801.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
gi|300147387|gb|EFJ14051.1| hypothetical protein SELMODRAFT_423971 [Selaginella moellendorffii]
Length = 354
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D NP G+ I+ Y FGS M G V ++KWLG+ DL + IP L
Sbjct: 234 ILALVDWNPCGLGIICTYKFGSVGM-GLEAPHYVCDVKWLGVSSEDLPR--IPPEYFVEL 290
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLAN 181
S D K L A ++++ + +EL++M + G++ EIEAL + YK L++
Sbjct: 291 SARDRQLAKGLLSS----AMLQNHPRYREELERMIQAGKRVEIEALYAHGYKSLSS 342
>gi|357139785|ref|XP_003571458.1| PREDICTED: meiotic recombination protein SPO11-2-like [Brachypodium
distachyon]
Length = 382
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL Y +GS +M + R A N+KWLG+ DLE IP+ Q L D+
Sbjct: 269 DWNPAGLAILCTYKYGSISMGLESYRYAC-NVKWLGIRGDDLEL--IPQSAFQELKPRDL 325
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
K + L R+ EL M + G++AEIEAL + + +L KY+ K
Sbjct: 326 QIAKGLMSSKFLQDKHRA------ELALMVEMGKRAEIEALYCHGFDFL-GKYIARKIVQ 378
Query: 191 EDWL 194
D++
Sbjct: 379 GDYI 382
>gi|327401250|ref|YP_004342089.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
gi|327316758|gb|AEA47374.1| Type 2 DNA topoisomerase 6 subunit A [Archaeoglobus veneficus SNP6]
Length = 380
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
V+ + + +R ++ N F I + +G R+ + L +L V+
Sbjct: 209 VIAIETGGMRDRLVENGFDEKFDAIIVHLKGQPARSTRRLLRRL----NTELGLPVVVFT 264
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P K++G+ PSD+ KY +P L+ DI
Sbjct: 265 DGDPWSYRIYASVAYGSIKSAHLSEYLATPAAKFVGIRPSDIVKYELPS---DKLTDQDI 321
Query: 131 SKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
L L+ R N W+KE+ + G+K+E +AL Y Y+ + YLP +
Sbjct: 322 KALNAILQD------PRFNTEFWKKEVTLQLELGKKSEQQALAKYGLDYVTDVYLPERL 374
>gi|226287116|gb|EEH42629.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 389
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKD-- 128
D +P G+ I++ Y +GS+ A N L V +I+W GL S++ + +L I D
Sbjct: 266 DSDPDGMAIMSTYKYGSRAQAHENNNLTVSDIQWFGLRSSEV----VSRLDAHIQDDDVL 321
Query: 129 ------DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
D K + L + + A +W ELQ M KAEIE L YE + +
Sbjct: 322 IPLTLRDRKKAQDMLARNPVFAEDGPEPTWRAELQHMLMSNVKAEIEVL--YEREEGVER 379
Query: 183 YLPSKFR 189
+L K R
Sbjct: 380 WLDLKLR 386
>gi|308491496|ref|XP_003107939.1| CRE-SPO-11 protein [Caenorhabditis remanei]
gi|308249886|gb|EFO93838.1| CRE-SPO-11 protein [Caenorhabditis remanei]
Length = 448
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L+ + K K + G FD +P+GI I Y +G+ V +I+W+GLFP+D +
Sbjct: 252 VLKMLSEKRKLPIYGLFDADPHGIEIYLTYKYGAAKETAEGRGAFVSSIQWIGLFPTDFK 311
Query: 114 KYNI-PKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ I P C +L + D K++ + + + +EL M + K E+E+++
Sbjct: 312 RFFIDPSQCLPLL-RSDFVKIENMIPR----SIQLGECLVTRELDWMIQNAFKLELESIN 366
Query: 173 MYEYKYLANKYLPSKFRA 190
M +Y+ + + R+
Sbjct: 367 MCGPEYMGKYLIAPRVRS 384
>gi|219120278|ref|XP_002180881.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217407597|gb|EEC47533.1| type II DNA topoisomerase VI subunit [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 432
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
V G DCNPYG+ +L Y ++ R VP I W+GL PS ++ +L RQ
Sbjct: 280 VRGLCDCNPYGVMVLHTYQHTARKGVDGGHRFGVP-ISWIGLRPSQVQ-----QLQRQPN 333
Query: 126 SKDDISKLK-------TFLEKGDLVAFVRS-NASWE---------KELQKMSKEGEKAEI 168
+K SKL T L+K L + S W +EL++M K G K E+
Sbjct: 334 TKHGQSKLPDQVFQSLTALDKRRLEHHLLSEQHGWTTFGPDERRVEELEEMLKNGYKMEL 393
Query: 169 EALDMYEYKYLANKYLPSKFRAED 192
EAL+ ++ K+L F +D
Sbjct: 394 EALNWLGMDFI-TKWLGDIFHYQD 416
>gi|308452846|ref|XP_003089203.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
gi|308241650|gb|EFO85602.1| hypothetical protein CRE_23242 [Caenorhabditis remanei]
Length = 458
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L+ + K K + G FD +P+GI I Y +G+ V +I+W+GLFP+D +
Sbjct: 262 VLKMLSEKRKFPIYGLFDADPHGIEIYLTYKYGAAKETAEGRGAFVSSIQWIGLFPTDFK 321
Query: 114 KYNI-PKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
++ I P C +L + D K++ + + + +EL M + K E+E+++
Sbjct: 322 RFFIDPSQCLPLL-RSDFVKIENMIPR----SIQLGECLVTRELDWMIQNAFKLELESIN 376
Query: 173 MYEYKYLANKYLPSKFRA 190
M +Y+ + + R+
Sbjct: 377 MCGPEYMGKYLIAPRVRS 394
>gi|448624639|ref|ZP_21670587.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
gi|445749844|gb|EMA01286.1| DNA topoisomerase VI subunit A [Haloferax denitrificans ATCC 35960]
Length = 366
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + V+C+ + +R ++ N + + + + G R + + + +L
Sbjct: 189 DHDIDFVMCVETGGMRDRLVENGFDDDYNALVVHLGGQPARATRR----ITKRLHDELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P K++G+ P D+ Y++P
Sbjct: 245 PVVVFTDGDPWSYRIFGSVAYGSIKSAHLSEYLATPEAKFVGIQPQDIVDYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE + W ++++ G+KAE +AL ++ ++YL
Sbjct: 302 LADSDINALQSELEDPRFMG-----DYWTEQIELQLDIGKKAEQQALASRGLDFVTDEYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|297742243|emb|CBI34392.3| unnamed protein product [Vitis vinifera]
Length = 381
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D NP G+ IL + FGS M R A N+KWLGL DL+ IP+ L
Sbjct: 263 ILALVDWNPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWLGLRGDDLQL--IPEESLIPL 319
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
D+ K+ L+ +++ ++ EL+ M + G +AEIEAL Y +L KY+
Sbjct: 320 KPRDLQIAKS-LKSSEIL-----EENYRNELEVMVQSGRRAEIEALYFRGYNFLG-KYIA 372
Query: 186 SKFRAEDWL 194
K +++
Sbjct: 373 KKIVQANYV 381
>gi|406866418|gb|EKD19458.1| meiosis-specific topoisomerase Spo11 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 430
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 60 CKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNI-- 117
C ++L D +P GI I+ Y GS+++A LAVP+++WLG+ D+ +
Sbjct: 305 CHPSIAILALVDFDPDGIGIMATYKHGSQSLAHEQ-DLAVPSVRWLGVRSGDIGAVGVGE 363
Query: 118 --PKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
P L R LS D LE+G V +A W +EL+ M KAEI+ L
Sbjct: 364 GEPGLLR--LSARDRRVAVRMLERGGQV-----DAEWMRELRVMLVLNVKAEIQIL 412
>gi|209945742|gb|ACI97102.1| meiotic W68 [Drosophila yakuba]
Length = 319
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+G+ I+ VY GS++M+ + L P ++W+GL PS++ + L D
Sbjct: 221 DADPFGVEIMLVYRHGSQSMSFSSQGLTTPALRWIGLHPSEIPALGTVAVA---LVAGDN 277
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
K+ L + DL VR +EL+ + KAEIE++
Sbjct: 278 KKINDLLARNDLEPGVR------QELRMLQDVQLKAEIESV 312
>gi|448491669|ref|ZP_21608509.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
gi|445692669|gb|ELZ44840.1| DNA topoisomerase VI subunit A [Halorubrum californiensis DSM
19288]
Length = 361
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + G R L + R +L V+
Sbjct: 190 VLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARATRR----LTKRFRDELDLPVVVFT 245
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS DI
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPS---DPLSDSDI 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L ++ + YLP +
Sbjct: 303 NALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|448423790|ref|ZP_21582123.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|448448963|ref|ZP_21591461.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
gi|448506626|ref|ZP_21614582.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|448524343|ref|ZP_21619325.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445683047|gb|ELZ35452.1| DNA topoisomerase VI subunit A [Halorubrum terrestre JCM 10247]
gi|445699576|gb|ELZ51600.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 9100]
gi|445700413|gb|ELZ52414.1| DNA topoisomerase VI subunit A [Halorubrum distributum JCM 10118]
gi|445814055|gb|EMA64027.1| DNA topoisomerase VI subunit A [Halorubrum litoreum JCM 13561]
Length = 361
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + G R L + R +L V+
Sbjct: 190 VLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARATRR----LTKRFRDELDLPVVVFT 245
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS DI
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPS---DPLSDSDI 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L ++ + YLP +
Sbjct: 303 NALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|212223912|ref|YP_002307148.1| DNA topoisomerase VI subunit A [Thermococcus onnurineus NA1]
gi|212008869|gb|ACJ16251.1| type II DNA topoisomerase VI, subunit A [Thermococcus onnurineus
NA1]
Length = 386
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 10/124 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I + GS N+A + +LA P K++G+ D+E+Y + + ++ I
Sbjct: 258 DGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIERYGLKNVTEKLKG---I 314
Query: 131 SKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
K GD + N W+++LQ K G + E +AL +++A KY
Sbjct: 315 PPNKKGGPTGDYKRIIEEMNYPWFQNKEWQRQLQLALKMGVRIEQQALANKSLEFVAKKY 374
Query: 184 LPSK 187
LP K
Sbjct: 375 LPEK 378
>gi|209945792|gb|ACI97127.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + DL VR +EL+ + K
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVR------QELRMLQDVQLKV 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|296808905|ref|XP_002844791.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
gi|238844274|gb|EEQ33936.1| meiotic recombination protein spo11 [Arthroderma otae CBS 113480]
Length = 387
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL------CRQI 124
D +P G+ I++ Y +GS +N L VP+I+W+GL+ S++ IP +
Sbjct: 266 DSDPDGMAIMSTYKYGSMAQVHQNAYLNVPSIQWIGLYASEM----IPTVDFLNGSSLIP 321
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+S+ D K + L + A SW KELQ + KAEIE L
Sbjct: 322 MSRRDRKKAEAMLNRNPCFAEDGPEPSWRKELQSLLVMNMKAEIEIL 368
>gi|448529391|ref|ZP_21620529.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
gi|445709153|gb|ELZ60986.1| DNA topoisomerase VI subunit A [Halorubrum hochstenium ATCC 700873]
Length = 361
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + G R L + R +L V+
Sbjct: 190 VLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARATRR----LTKRFRDELDLPVVVFT 245
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS DI
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPS---DPLSDSDI 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L ++ + YLP +
Sbjct: 303 NALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|30696943|ref|NP_176582.2| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
gi|75335899|sp|Q9M4A1.1|SPO12_ARATH RecName: Full=Meiotic recombination protein SPO11-2;
Short=AtSPO11-2
gi|7270977|emb|CAB81545.1| putative topoisomerase VIA [Arabidopsis thaliana]
gi|91806019|gb|ABE65738.1| DNA topoisomerase VIA [Arabidopsis thaliana]
gi|332196057|gb|AEE34178.1| meiotic recombination protein SPO11-2 [Arabidopsis thaliana]
Length = 383
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D NP G+ IL + FGS M R A N+KW+GL DL IP+ L D
Sbjct: 270 DWNPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWIGLRGDDLNL--IPEESLVPLKPKDS 326
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
K+ L L ++ +EL M + G++AEIEAL + Y YL KY+ +K
Sbjct: 327 QIAKSLLSSKIL------QENYIEELSLMVQTGKRAEIEALYCHGYNYLG-KYIATK 376
>gi|119183419|ref|XP_001242749.1| hypothetical protein CIMG_06645 [Coccidioides immitis RS]
Length = 354
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKD 128
DC+P G+ I++ Y +GS + + N L VP ++WLGL SD + R + ++
Sbjct: 236 DCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDTAIPGNADVDRPLIPMTLR 295
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D ++ + L + + R W ELQ+M KAEIE L
Sbjct: 296 DRTRAQAMLSHSVIFSDEREQ-EWRLELQRMLMVNAKAEIEVL 337
>gi|392865657|gb|EAS31463.2| meiotic recombination protein spo11 [Coccidioides immitis RS]
Length = 383
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKD 128
DC+P G+ I++ Y +GS + + N L VP ++WLGL SD + R + ++
Sbjct: 265 DCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDTAIPGNADVDRPLIPMTLR 324
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D ++ + L + + R W ELQ+M KAEIE L
Sbjct: 325 DRTRAQAMLSHSVIFSDEREQ-EWRLELQRMLMVNAKAEIEVL 366
>gi|320034211|gb|EFW16156.1| meiosis-specific topoisomerase Spo11 [Coccidioides posadasii str.
Silveira]
Length = 383
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKD 128
DC+P G+ I++ Y +GS + + N L VP ++WLGL SD + R + ++
Sbjct: 265 DCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDTAIPGNADVDRPLIPMTLR 324
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D ++ + L + + R W ELQ+M KAEIE L
Sbjct: 325 DRARAQAMLSHSVIFSDEREQ-EWRLELQRMLMVNAKAEIEVL 366
>gi|303319823|ref|XP_003069911.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109597|gb|EER27766.1| meiotic recombination protein SPO11, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 370
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKD 128
DC+P G+ I++ Y +GS + + N L VP ++WLGL SD + R + ++
Sbjct: 252 DCDPDGMAIMSTYKYGSISQSHENANLNVPGVEWLGLRASDTAIPGNADVDRPLIPMTLR 311
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D ++ + L + + R W ELQ+M KAEIE L
Sbjct: 312 DRARAQAMLSHSVIFSDEREQ-EWRLELQRMLMVNAKAEIEVL 353
>gi|341581302|ref|YP_004761794.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
gi|340808960|gb|AEK72117.1| DNA topoisomerase VI subunit A [Thermococcus sp. 4557]
Length = 386
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS---- 126
D +PYG +I + GS N+A + +LA P K++G+ D+E+Y + + ++
Sbjct: 258 DGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIERYGLKNVTEKLKGIPPN 317
Query: 127 --KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
+ K LE+ + F N W+++L+ K G + E +AL +++A KYL
Sbjct: 318 KKGGPTADYKRILEEMEYPWF--QNKEWQRQLKMAIKMGVRIEQQALANKSLEFVAKKYL 375
Query: 185 PSK 187
P K
Sbjct: 376 PEK 378
>gi|448502260|ref|ZP_21612533.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
gi|445694416|gb|ELZ46545.1| DNA topoisomerase VI subunit A [Halorubrum coriense DSM 10284]
Length = 361
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + G R L + R +L V+
Sbjct: 190 VLCVETGGMRDRLVENGFDEEHDALVVHLGGQPARATRR----LTKRFRDELDLPVVVFT 245
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS DI
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPS---DPLSDSDI 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L ++ + YLP +
Sbjct: 303 NALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|409728295|ref|ZP_11271162.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|448721868|ref|ZP_21704411.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
gi|445790940|gb|EMA41590.1| DNA topoisomerase VI subunit A [Halococcus hamelinensis 100A6]
Length = 366
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N F + + G R +++ + +L V+
Sbjct: 195 VLCVETGGMRDRLVENGFDEDFSTLVVHLGGQPARATRR----IIKRLHDELDLPVVVFT 250
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P LS DI
Sbjct: 251 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFIGIQPADIVEYDLPT---DPLSDSDI 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ L W ++++ G+KAE ++L ++ + YLP + A
Sbjct: 308 NALESELTDPRF-----QTDYWREQIELQLDIGKKAEQQSLAARGLDFVTDTYLPERLTA 362
>gi|14520811|ref|NP_126286.1| DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
gi|13124622|sp|Q9V134.1|TOP6A_PYRAB RecName: Full=Type II DNA topoisomerase VI subunit A
gi|5458027|emb|CAB49517.1| Top6A DNA topoisomerase VI, subunit A [Pyrococcus abyssi GE5]
gi|380741353|tpe|CCE69987.1| TPA: DNA topoisomerase VI subunit A [Pyrococcus abyssi GE5]
Length = 382
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I + GS N+A + +LA P+ K++G+ D+++YN+ + ++ I
Sbjct: 254 DGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLEHVTEKLKG---I 310
Query: 131 SKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
K GD + N W+++L+ K G + E +AL +++A +Y
Sbjct: 311 PPDKKGGPTGDYKRLIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEY 370
Query: 184 LPSKFR 189
LP K R
Sbjct: 371 LPEKIR 376
>gi|448391960|ref|ZP_21567055.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
gi|445665372|gb|ELZ18050.1| DNA topoisomerase VI subunit A [Haloterrigena salina JCM 13891]
Length = 363
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + I + G R L + +L V+
Sbjct: 192 VLCVETGGMRDRLVENGFDEEYDAIVVHLGGQPARATRR----LTKRFHDELGLPVVVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P K++G+ P+D+ +Y++P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPADIVEYDLPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +K+E ++L + ++ + YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLDIEKKSEQQSLASHGLDFVTDTYLPERL 357
>gi|209945746|gb|ACI97104.1| meiotic W68 [Drosophila simulans]
gi|209945752|gb|ACI97107.1| meiotic W68 [Drosophila simulans]
gi|209945754|gb|ACI97108.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L+ +L D +P+G+ I+ VY GS++M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLEAYIL--VDADPFGVEIMLVYRHGSQSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + +L VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHNLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|209945750|gb|ACI97106.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GS++M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSQSMSFSSQELTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + +L VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHNLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|390962072|ref|YP_006425906.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
gi|390520380|gb|AFL96112.1| DNA topoisomerase VI subunit A [Thermococcus sp. CL1]
Length = 386
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS---- 126
D +PYG +I + GS N+A + +LA P K++G+ D+E+Y + + ++
Sbjct: 258 DGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIERYGLKNVTEKLKGIPPN 317
Query: 127 --KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
K LE+ + F N W+++L+ K G + E +AL +++A KYL
Sbjct: 318 KKGGPTGDYKRILEEMEYPWF--QNKEWQRQLKMALKMGVRIEQQALANKSLEFVAKKYL 375
Query: 185 PSK 187
P K
Sbjct: 376 PEK 378
>gi|300711732|ref|YP_003737546.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|448296159|ref|ZP_21486220.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|299125415|gb|ADJ15754.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
gi|445582882|gb|ELY37222.1| DNA topoisomerase VI subunit A [Halalkalicoccus jeotgali B3]
Length = 363
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VL + + +R ++ N + VI + +G R + + + +L V
Sbjct: 192 VLAVETGGMRDRLVENGFDEEYNVIIVHLKGQPARATRR----ITKRLHDELDLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P LS D+
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQPTDIVEYDLPT---DPLSDSDV 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L+ LE W ++++ + G+KAE +AL ++ + YLP + A
Sbjct: 305 NALENELEDPRF-----QTDYWTEQIELQLEIGKKAEQQALASRGLDFVTDTYLPERLAA 359
Query: 191 EDWL 194
D L
Sbjct: 360 MDVL 363
>gi|302681745|ref|XP_003030554.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
gi|300104245|gb|EFI95651.1| hypothetical protein SCHCODRAFT_39718 [Schizophyllum commune H4-8]
Length = 277
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 60 CKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPK 119
C +L D + YG+ IL+VY +GS+++ +LA ++W+G+ S+L + +
Sbjct: 169 CLQDVPILALVDADAYGLDILSVYKYGSRSLRHEVGKLAAARMEWMGVKGSELNELGVHA 228
Query: 120 LCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+K D T L + DL W KEL +M KAEIE L
Sbjct: 229 DHLLPFTKQDEKMALTMLRRPDL------PQEWRKELSRMLFTRRKAEIEVL 274
>gi|302808341|ref|XP_002985865.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
gi|300146372|gb|EFJ13042.1| hypothetical protein SELMODRAFT_424927 [Selaginella moellendorffii]
Length = 354
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D NP G+ I+ Y FGS M G V ++KWLG+ DL + P+ ++
Sbjct: 234 ILALVDWNPCGLGIICTYKFGSVGM-GLEAPHYVCDVKWLGVSSEDLPRIT-PEYFVELS 291
Query: 126 SKDDISKLKTFLEKGDLV-AFVRSNASWEKELQKMSKEGEKAEIEALDMYEYK----YLA 180
++D L KG + A ++++ + +EL++M + G++ EIEAL + YK Y+A
Sbjct: 292 ARD------RQLAKGLISSAMLQNHPRYREELERMIQAGKRVEIEALYAHGYKSLSGYVA 345
Query: 181 NKYLPSKF 188
K + ++
Sbjct: 346 QKIVQMRY 353
>gi|448373989|ref|ZP_21557874.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
gi|445660666|gb|ELZ13461.1| DNA topoisomerase VI subunit A [Halovivax asiaticus JCM 14624]
Length = 366
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E++ VL + + +R ++ N + + I + G R L++ +R +L
Sbjct: 189 ENDADFVLAVETGGMRDRLVENGFDDEYNSIVVHLGGQPARATRR----LIKRMRNELDL 244
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P+ +++G+ P D+ +Y++P
Sbjct: 245 PVVVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPDAQYIGIRPEDIVEYDLPT---DP 301
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
LS D++ L++ LE WE++++ + +K+E ++L ++ + YL
Sbjct: 302 LSDSDVNALESELEDPRF-----QTEFWEEQIELQLEIEKKSEQQSLAARGLDFVTDTYL 356
Query: 185 PSKF 188
P++
Sbjct: 357 PTRL 360
>gi|76802378|ref|YP_327386.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
gi|121695453|sp|Q3IPW7.1|TOP6A_NATPD RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|76558243|emb|CAI49831.1| DNA topoisomerase VI subunit A [Natronomonas pharaonis DSM 2160]
Length = 368
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N VI + +G R + + + L V+
Sbjct: 197 VLCVETGGMRDRLVENGFDEEHNVIIVHLKGQPARATRR----ITKRLHDDLDLPVVVFC 252
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P LS DI
Sbjct: 253 DGDPWSYRIYASVAYGSIKSAHLSEYLATPEAEYIGIQPADIVEYDLPT---DPLSDSDI 309
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L+ + W ++++ G+KAE +AL ++ YLP +
Sbjct: 310 NALESELDDPRF-----QDDYWREQIELQLDIGKKAEQQALASRGLDFVTETYLPERL 362
>gi|449452446|ref|XP_004143970.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 384
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+ G D NP G+ IL + +GS M R A N+KWLG+ DL+ IP+ L
Sbjct: 266 MFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYAC-NVKWLGVRGDDLQL--IPQESLVPL 322
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
D+ K+ L L ++ +EL M + G+KAE+EAL + YL KY+
Sbjct: 323 KPRDLQIAKSLLSSKIL------QENYRQELTLMVERGQKAELEALYHNGFDYL-EKYIV 375
Query: 186 SK 187
K
Sbjct: 376 KK 377
>gi|15897848|ref|NP_342453.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus P2]
gi|284175657|ref|ZP_06389626.1| DNA topoisomerase VI subunit A [Sulfolobus solfataricus 98/2]
gi|384434402|ref|YP_005643760.1| DNA topoisomerase [Sulfolobus solfataricus 98/2]
gi|13814151|gb|AAK41243.1| DNA topoisomerase VI subunit A (top6A) [Sulfolobus solfataricus P2]
gi|261602556|gb|ACX92159.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus solfataricus 98/2]
Length = 389
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL- 112
+R + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG+ SD+
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMSDIF 303
Query: 113 --------------EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQK 158
+ Y I I ++I + F K +WE+E+
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKEADIKRAEEIKNYEWFKTK-----------AWEEEINT 352
Query: 159 MSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
K EIEA+ K+LA +Y+P K +D++
Sbjct: 353 FLHRKAKLEIEAMASKGLKFLAFQYIPEKITNKDYI 388
>gi|145353167|ref|XP_001420895.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581131|gb|ABO99188.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 287
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS 126
G D NP G IL+ Y G+ + A ++ V +KW+GL DL Y IP+ Q LS
Sbjct: 165 FGLVDWNPSGCWILSTYTVGNSSSA-MDVSEYVTPLKWIGLRSQDL--YLIPECAFQALS 221
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMY-EYKYLANKYLP 185
D + + L + +R AS EL+ M G+KAEIEAL + +L ++
Sbjct: 222 SRDEAMINNALNETAATHPLRPFAS---ELEVMQARGQKAEIEALYANDDISFLLTDFVS 278
Query: 186 SKFRA 190
SK A
Sbjct: 279 SKIAA 283
>gi|391874466|gb|EIT83348.1| catalytic subunit of the meiotic double strand break transesterase
[Aspergillus oryzae 3.042]
Length = 389
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 68 GSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--L 125
G D +P G+ I+++Y +GS +N RL +P + WLGL SD+ R + L
Sbjct: 261 GLVDNDPDGMAIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTSDVVSGAPSNDDRALNRL 320
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D +K+ T L + A W ELQ+M KAEIE L
Sbjct: 321 TVRDRTKIVTMLSNNPVWAAEGPELEWRAELQQMLMLNLKAEIEIL 366
>gi|448479369|ref|ZP_21604221.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
gi|445822647|gb|EMA72411.1| DNA topoisomerase VI subunit A [Halorubrum arcis JCM 13916]
Length = 361
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + G R L + R +L V+
Sbjct: 190 VLCVETGGMRDRLVENGFDEAHDALVVHLGGQPARATRR----LTKRFRDELDLPVVVFT 245
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS DI
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPS---DPLSDSDI 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L+ WE++++ G+K+E ++L ++ + YLP +
Sbjct: 303 NALESELDDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|209945744|gb|ACI97103.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GS++M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSQSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + +L VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHNLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|83771493|dbj|BAE61625.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 384
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 68 GSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--L 125
G D +P G+ I+++Y +GS +N RL +P + WLGL SD+ R + L
Sbjct: 256 GLVDNDPDGMAIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTSDVVSGAPSNDDRALNRL 315
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D +K+ T L + A W ELQ+M KAEIE L
Sbjct: 316 TVRDRTKIVTMLSNNPVWAAEGPELEWRAELQQMLMLNLKAEIEIL 361
>gi|335433682|ref|ZP_08558500.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
gi|334898485|gb|EGM36591.1| DNA topoisomerase VI subunit A [Halorhabdus tiamatea SARL4B]
Length = 370
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + + G R L + + +L V
Sbjct: 199 VLCVETGGMRDRLVENGFDDEYNALVVHLGGQPARATRR----LTKRLHDELDLPVTVFT 254
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P L+ D+
Sbjct: 255 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFIGVQPEDIVEYDLPT---DPLADSDV 311
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +K+E +AL Y ++ + YLP +
Sbjct: 312 NALESELEDPRF-----QTDYWEEQIELQLDIDKKSEQQALASYGLDFVTDTYLPERL 364
>gi|67902544|ref|XP_681528.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|40739807|gb|EAA58997.1| hypothetical protein AN8259.2 [Aspergillus nidulans FGSC A4]
gi|259481048|tpe|CBF74226.1| TPA: spo11 homologue spoA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 328
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD----LEKYNIPKLCRQILS 126
D +P GI I++ Y +GS N RL +P ++WLGL S+ LE L L+
Sbjct: 206 DGDPDGIAIMSTYKYGSMAHTRENERLNLPCLQWLGLRISEIIGGLESDADETLMS--LT 263
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D K+ T L++ + A A W ELQ+M KAEIE L
Sbjct: 264 RRDRRKIGTMLKRSPIWAVDGPEAEWRVELQRMLILNVKAEIEIL 308
>gi|448727753|ref|ZP_21710102.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
gi|445789739|gb|EMA40418.1| DNA topoisomerase VI subunit A [Halococcus morrhuae DSM 1307]
Length = 366
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+LC+ + +R ++ N + + I + +G R + + + +L V+
Sbjct: 195 ILCVETGGMRDRLVENGFDDDYGTIVVHLKGQPARATRR----ITKRLHNELDLPVVVFT 250
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P K++G+ P+D+ +Y++P L+ DI
Sbjct: 251 DGDPWSYRIYGSVAYGSIKSAHLSDYLATPEAKFVGIQPTDIVEYDLPT---DPLADSDI 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L W ++++ G+KAE +AL ++ + YLP +
Sbjct: 308 NALESELSDPRF-----QTDYWREQIELQLDIGKKAEQQALASRGLDFVTDTYLPERL 360
>gi|448414640|ref|ZP_21577653.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
gi|445681749|gb|ELZ34177.1| DNA topoisomerase VI subunit A [Halosarcina pallida JCM 14848]
Length = 364
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + G R L + + +L V+
Sbjct: 193 VLCVETGGMRDRLVENGFDTEHDALVVHLGGQPARATRR----LTKRLHDELGLPVVVFT 248
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P K++G+ P D+ Y++P LS D+
Sbjct: 249 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPQDIVDYDLPT---DPLSDSDV 305
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE + WE+++Q +KAE ++L ++ + YLP +
Sbjct: 306 NALESELEDPRFMT-----DYWEEQIQLQLDINKKAEQQSLAARGLDFVTDTYLPERL 358
>gi|291333323|gb|ADD93030.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S04-C246]
Length = 368
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+++ + + KK +L DC+P+ I +G+ A + LA +LG+ D+
Sbjct: 235 IMKRMSDEWKKPILVFADCDPWSFRIFASIAYGAIKTAHISEYLATNEAIYLGITADDIL 294
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++P L+K D+ L++ L + W++++ M + G+KAE ++L
Sbjct: 295 AYDLPS---DDLTKSDLGALESELSDPRF-----ATGWWKEQINLMQEIGKKAEQQSLAK 346
Query: 174 YEYKYLANKYLPSKFRA 190
Y ++ + YLP K A
Sbjct: 347 YGLDFVTDTYLPEKLAA 363
>gi|448410255|ref|ZP_21575120.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
gi|445671951|gb|ELZ24530.1| DNA topoisomerase VI subunit A [Halosimplex carlsbadense 2-9-1]
Length = 363
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + G R L + + +L V
Sbjct: 192 VLCVETGGMRDRLVENGFDDEHDALVVHLGGQPARATRR----LTKRLHDELDLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS D+
Sbjct: 248 DGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGVQPEDIVEYDLPT---DPLSDSDV 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ + +K+E ++L Y ++ + YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLEIDKKSEQQSLASYGLDFVTDTYLPERL 357
>gi|448438357|ref|ZP_21587849.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
gi|445679178|gb|ELZ31651.1| DNA topoisomerase VI subunit A [Halorubrum tebenquichense DSM
14210]
Length = 361
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + G R L + R +L V+
Sbjct: 190 VLCVETGGMRDRLVENGFDEEHDALVVHLGGQPARATRR----LTKRFRDELDLPVVVFT 245
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P L+ DI
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEARFIGIQPEDIVEYDLPS---DPLADSDI 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L ++ + YLP +
Sbjct: 303 NALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|317148419|ref|XP_001822758.2| meiotic recombination protein spo11 [Aspergillus oryzae RIB40]
Length = 395
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 68 GSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--L 125
G D +P G+ I+++Y +GS +N RL +P + WLGL SD+ R + L
Sbjct: 267 GLVDNDPDGMAIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTSDVVSGAPSNDDRALNRL 326
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D +K+ T L + A W ELQ+M KAEIE L
Sbjct: 327 TVRDRTKIVTMLSNNPVWAAEGPELEWRAELQQMLMLNLKAEIEIL 372
>gi|313126398|ref|YP_004036668.1| DNA topoisomerase vi subunit a [Halogeometricum borinquense DSM
11551]
gi|448286242|ref|ZP_21477476.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
gi|312292763|gb|ADQ67223.1| DNA topoisomerase VI, subunit A [Halogeometricum borinquense DSM
11551]
gi|445575075|gb|ELY29557.1| DNA topoisomerase VI subunit A [Halogeometricum borinquense DSM
11551]
Length = 364
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R +I N + + + +G R + + + +L V+
Sbjct: 193 VLCVETGGMRDRLIENGFDEEYGCLVVHLKGQPARATRR----ITKRLHDELDLPVMVFT 248
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ Y++P LS DI
Sbjct: 249 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFVGIQPQDIVDYDLPT---DPLSDSDI 305
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE + WE++++ +KAE +AL ++ + YLP +
Sbjct: 306 NALESELEDPRFMT-----DYWEEQIELQLDIEKKAEQQALASRGLDFVTDTYLPERL 358
>gi|209945790|gb|ACI97126.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQ 157
L PS++ + L D K+ L + DL VR +++Q
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVRQELRMLQDVQ 304
>gi|209945756|gb|ACI97109.1| meiotic W68 [Drosophila melanogaster]
Length = 319
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L +L D +P+G+ I+ VY GSK+M+ + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLAAYIL--VDADPFGVEIMLVYRHGSKSMSFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQ 157
L PS++ + L D K+ L + DL VR +++Q
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHDLEPGVRQELRMLQDVQ 304
>gi|433638425|ref|YP_007284185.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
gi|433290229|gb|AGB16052.1| DNA topoisomerase VI, subunit A [Halovivax ruber XH-70]
Length = 366
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VL + + +R ++ N + + I + G R L++ +R +L V+
Sbjct: 195 VLAVETGGMRDRLVENGFDDEYNSIVVHLGGQPARATRR----LIKRMRNELDLPVVVFA 250
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P+ +++G+ P D+ +Y++P LS D+
Sbjct: 251 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPDAQYIGIRPEDIVEYDLPT---DPLSDSDV 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ + +K+E ++L ++ + YLP++
Sbjct: 308 NALESELEDPRF-----QTEFWEEQIELQLEIEKKSEQQSLAARGLDFVTDTYLPTRL 360
>gi|14591345|ref|NP_143423.1| DNA topoisomerase VI subunit A [Pyrococcus horikoshii OT3]
gi|3257992|dbj|BAA30675.1| 301aa long hypothetical typeII DNA topoisomerase subunit A
[Pyrococcus horikoshii OT3]
Length = 301
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I + GS N+A + +LA P+ K++G+ D+++YN+ + ++ I
Sbjct: 173 DGDPYGWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLENVTEKLKG---I 229
Query: 131 SKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
K GD + + W+++L+ K G + E +AL +++A +Y
Sbjct: 230 PPDKKGGPTGDYKRLIEELNYPWFQDKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEY 289
Query: 184 LPSKFR 189
LP K R
Sbjct: 290 LPEKIR 295
>gi|209945748|gb|ACI97105.1| meiotic W68 [Drosophila simulans]
Length = 319
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C +IV L E +L+ +L D +P+G+ I+ VY GS++M + L P ++W+G
Sbjct: 200 CTRRIVHRLTE-ENQLEAYIL--VDADPFGVEIMLVYRHGSQSMCFSSQGLTTPALRWIG 256
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
L PS++ + L D K+ L + +L VR +EL+ + KA
Sbjct: 257 LHPSEIPALGTGAVA---LVAGDNKKINDLLARHNLEPGVR------QELRMLQDVQLKA 307
Query: 167 EIEAL 171
EIE++
Sbjct: 308 EIESV 312
>gi|6692104|gb|AAF24569.1|AC007764_11 F22C12.24 [Arabidopsis thaliana]
Length = 299
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 73 NPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISK 132
NP G+ IL + FGS M R A N+KW+GL DL IP+ L D
Sbjct: 188 NPAGLAILCTFKFGSIGMGLEAYRYAC-NVKWIGLRGDDLNL--IPEESLVPLKPKDSQI 244
Query: 133 LKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSK 187
K+ L L ++ +EL M + G++AEIEAL + Y YL KY+ +K
Sbjct: 245 AKSLLSSKIL------QENYIEELSLMVQTGKRAEIEALYCHGYNYLG-KYIATK 292
>gi|57640733|ref|YP_183211.1| DNA topoisomerase VI subunit A [Thermococcus kodakarensis KOD1]
gi|90110665|sp|Q5JH82.1|TOP6A_PYRKO RecName: Full=Type II DNA topoisomerase VI subunit A
gi|57159057|dbj|BAD84987.1| type II DNA topoisomerase VI, subunit A [Thermococcus kodakarensis
KOD1]
Length = 385
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS---- 126
D +PYG +I + GS N+A + +LA P K++G+ D++KY + + ++
Sbjct: 257 DGDPYGWYIYSTIKQGSINLAYLSDKLATPESKFVGMTMDDIKKYGLENVTEKLKGIPPN 316
Query: 127 --KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
K LE+ + F N W+++LQ K G + E +AL +++A +YL
Sbjct: 317 KKGGPTGDYKRILEEMNYPWF--QNKEWQRQLQLALKWGVRIEQQALANKSLEFVAKEYL 374
Query: 185 PSKFRAEDWL 194
P K D L
Sbjct: 375 PEKINNGDLL 384
>gi|3024738|sp|O05208.1|TOP6A_SULSH RecName: Full=Type II DNA topoisomerase VI subunit A
gi|167745000|pdb|2ZBK|A Chain A, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745002|pdb|2ZBK|C Chain C, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745004|pdb|2ZBK|E Chain E, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|167745006|pdb|2ZBK|G Chain G, Crystal Structure Of An Intact Type Ii Dna Topoisomerase:
Insights Into Dna Transfer Mechanisms
gi|1926404|emb|CAA71605.1| type II DNA topoisomerase subunit A [Sulfolobus shibatae B12]
Length = 389
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LF 108
+R + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG +F
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDAKFLGVSMGDIF 303
Query: 109 PSDLEKYNIPKLCRQ---ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ +K + + R+ I +KD + +K E + F +W++E+ + K
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKD--ADIKRAEEIKNYEWF--KTKAWQEEINTFLQRKAK 359
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ K+LA +Y+P K +D++
Sbjct: 360 LEIEAMASKGLKFLAFQYIPEKITNKDYI 388
>gi|196008211|ref|XP_002113971.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
gi|190582990|gb|EDV23061.1| hypothetical protein TRIADDRAFT_57943 [Trichoplax adhaerens]
Length = 161
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+++R + LK D +PYG+ I VY +GSK M+ L P IKWLG+ PS+
Sbjct: 81 LMIRFLWDALKLPTFVLTDADPYGLEIFCVYKYGSKEMSFEAENLCFPLIKWLGVLPSEF 140
Query: 113 EKYNIPKL 120
KY K+
Sbjct: 141 NKYTNDKI 148
>gi|448298523|ref|ZP_21488551.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
gi|445591193|gb|ELY45399.1| DNA topoisomerase VI subunit A [Natronorubrum tibetense GA33]
Length = 363
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 6 SNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKS 65
S+ +L + + +R ++ N + + + +G R +++ + +L+
Sbjct: 187 SDADFILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----IIKRLHDELELP 242
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
V D +P+ I +GS A + LA P +++G+ P+D+ +Y +P L
Sbjct: 243 VTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQYIGIQPADIVEYELPT---DPL 299
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
S DI+ L++ LE WE++++ + G+K+E ++L ++ + YLP
Sbjct: 300 SDSDINALESELEDPRF-----QTDYWEEQIELQLEIGKKSEQQSLAARGLDFVTDTYLP 354
Query: 186 SKFRA 190
+ A
Sbjct: 355 ERLDA 359
>gi|347523834|ref|YP_004781404.1| DNA topoisomerase [Pyrolobus fumarii 1A]
gi|343460716|gb|AEM39152.1| DNA topoisomerase (ATP-hydrolyzing) [Pyrolobus fumarii 1A]
Length = 388
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL--EKYNIPKLC----RQI 124
D +PYG +I +V+ GS ++ + RLA P ++LG+ +D+ ++ P L R
Sbjct: 260 DADPYGWYIYSVFKIGSITLSYESERLATPKARFLGVSMTDIFGDERKKPYLTETERRNF 319
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
+ K + +K E + F W KE+ ++ K EIEAL ++LA KY+
Sbjct: 320 IIKAKDADIKRAEELRNYKWF--QTPQWRKEIDIFLRKKAKLEIEALAGKGLRFLAFKYI 377
Query: 185 PSKFRAEDWL 194
P K D++
Sbjct: 378 PEKIETGDFI 387
>gi|7994697|sp|O59209.2|TOP6A_PYRHO RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 382
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I + GS N+A + +LA P+ K++G+ D+++YN+ + ++ I
Sbjct: 254 DGDPYGWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYNLENVTEKLKG---I 310
Query: 131 SKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
K GD + + W+++L+ K G + E +AL +++A +Y
Sbjct: 311 PPDKKGGPTGDYKRLIEELNYPWFQDKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEY 370
Query: 184 LPSKFR 189
LP K R
Sbjct: 371 LPEKIR 376
>gi|55377344|ref|YP_135194.1| DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC 43049]
gi|448640229|ref|ZP_21677283.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|448649278|ref|ZP_21679991.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
gi|68053279|sp|Q5V4R4.1|TOP6A_HALMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|55230069|gb|AAV45488.1| type II DNA topoisomerase VI subunit A [Haloarcula marismortui ATCC
43049]
gi|445762019|gb|EMA13253.1| DNA topoisomerase VI subunit A [Haloarcula sinaiiensis ATCC 33800]
gi|445773922|gb|EMA24951.1| DNA topoisomerase VI subunit A [Haloarcula californiae ATCC 33799]
Length = 368
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + + G R L++ + +L V
Sbjct: 197 VLCVETGGMRDRLVENGFDDEYDALVVHLGGQPARATRR----LIKRLHDELDLPVTVFT 252
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y +P LS D+
Sbjct: 253 DGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPT---DPLSDSDV 309
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +KAE +AL ++ YLP +
Sbjct: 310 NALESELEDPRF-----QTDFWEEQIELQLDINKKAEQQALASRGLDFVTETYLPERL 362
>gi|18977950|ref|NP_579307.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus DSM 3638]
gi|397652071|ref|YP_006492652.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
gi|22654150|sp|Q8U0K9.1|TOP6A_PYRFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|18893722|gb|AAL81702.1| type II DNA topoisomerase subunit a [Pyrococcus furiosus DSM 3638]
gi|393189662|gb|AFN04360.1| DNA topoisomerase VI subunit A [Pyrococcus furiosus COM1]
Length = 382
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E N VL + ++A+ +I + + +G A+R L+ + +
Sbjct: 192 EINVDYVLVVETAAMADRLIEEKYPKRERALIIATQGQASRGVRR----LIHRLHYEEGL 247
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
++ D +PYG +I + GS N+A + +LA P+ K++G+ D+++Y + + ++
Sbjct: 248 PIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLEHVTEKL 307
Query: 125 LSKDDISKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYK 177
I K GD + N W+++L+ K G + E +AL +
Sbjct: 308 KG---IPPDKKGGPTGDYKRLIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLE 364
Query: 178 YLANKYLPSKFR 189
++A +YLP K R
Sbjct: 365 FVAKEYLPEKIR 376
>gi|344211460|ref|YP_004795780.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|448667080|ref|ZP_21685681.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
gi|343782815|gb|AEM56792.1| DNA topoisomerase VI subunit A [Haloarcula hispanica ATCC 33960]
gi|445770602|gb|EMA21661.1| DNA topoisomerase VI subunit A [Haloarcula amylolytica JCM 13557]
Length = 368
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + + G R L++ + +L V
Sbjct: 197 VLCVETGGMRDRLVENGFDDEYDALVVHLGGQPARATRR----LIKRLHDELDLPVTVFT 252
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y +P LS D+
Sbjct: 253 DGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPT---DPLSDSDV 309
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +KAE +AL ++ YLP +
Sbjct: 310 NALESELEDPRF-----QTDFWEEQIELQLDINKKAEQQALASRGLDFVTETYLPERL 362
>gi|223478247|ref|YP_002582502.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
gi|214033473|gb|EEB74300.1| DNA topoisomerase VI subunit A [Thermococcus sp. AM4]
Length = 386
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS---- 126
D +PYG +I + GS N+A + +LA P K++G+ D+++Y + + ++
Sbjct: 258 DGDPYGWYIYSTIKQGSINLAYLSDKLATPEAKFVGMTMDDIKRYGLENVTEKLKGIPPN 317
Query: 127 --KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
K LE+ + F N W+++L+ K G + E +AL +++A +YL
Sbjct: 318 KKGGPTGDYKRILEEMEYPWF--QNREWQRQLKMALKWGVRIEQQALANKSLEFVAKEYL 375
Query: 185 PSKFRAEDWL 194
P K + D L
Sbjct: 376 PEKINSGDLL 385
>gi|448399836|ref|ZP_21571069.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
gi|445668289|gb|ELZ20919.1| DNA topoisomerase VI subunit A [Haloterrigena limicola JCM 13563]
Length = 363
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARATRR----ITKRLHDELDLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQPADIVEYDLPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E +AL + ++ YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLDLGKKSEQQALASHGLDFVTETYLPERL 357
>gi|227830214|ref|YP_002831994.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus L.S.2.15]
gi|227456662|gb|ACP35349.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
L.S.2.15]
Length = 389
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LF 108
+R + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG +F
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIF 303
Query: 109 PSDLEKYNIPKLCRQ---ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ +K + + R+ I +KD + +K E + F +W++E+ + K
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKD--ADIKRAEEIKNYEWF--KTKAWQEEINTFLQRKAK 359
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ K+LA +Y+P K +D++
Sbjct: 360 LEIEAMASKGLKFLAFQYIPEKITNKDYI 388
>gi|385773196|ref|YP_005645762.1| DNA topoisomerase [Sulfolobus islandicus HVE10/4]
gi|385775830|ref|YP_005648398.1| DNA topoisomerase [Sulfolobus islandicus REY15A]
gi|323474578|gb|ADX85184.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus REY15A]
gi|323477310|gb|ADX82548.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus HVE10/4]
Length = 389
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LF 108
+R + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG +F
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIF 303
Query: 109 PSDLEKYNIPKLCRQ---ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ +K + + R+ I +KD + +K E + F +W++E+ + K
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKD--ADIKRAEEIKNYEWF--KTKAWQEEINTFLQRKAK 359
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ K+LA +Y+P K +D++
Sbjct: 360 LEIEAMASKGLKFLAFQYIPEKITNKDYI 388
>gi|227827527|ref|YP_002829307.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.14.25]
gi|229579029|ref|YP_002837427.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.G.57.14]
gi|229584730|ref|YP_002843232.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.27]
gi|238619684|ref|YP_002914510.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus M.16.4]
gi|284997637|ref|YP_003419404.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
gi|227459323|gb|ACP38009.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.14.25]
gi|228009743|gb|ACP45505.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.G.57.14]
gi|228019780|gb|ACP55187.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.27]
gi|238380754|gb|ACR41842.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus M.16.4]
gi|284445532|gb|ADB87034.1| Spo11/DNA topoisomerase VI, subunit A [Sulfolobus islandicus
L.D.8.5]
Length = 389
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LF 108
+R + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG +F
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIF 303
Query: 109 PSDLEKYNIPKLCRQ---ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ +K + + R+ I +KD + +K E + F +W++E+ + K
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKD--ADIKRAEEIKNYEWF--KTKAWQEEINTFLQRKAK 359
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ K+LA +Y+P K +D++
Sbjct: 360 LEIEAMASKGLKFLAFQYIPEKITNKDYI 388
>gi|15790022|ref|NP_279846.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|169235745|ref|YP_001688945.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
gi|13124612|sp|Q9HR32.1|TOP6A_HALSA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|229558493|sp|B0R4D2.1|TOP6A_HALS3 RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|10580448|gb|AAG19326.1| DNA topoisomerase VI subunit A [Halobacterium sp. NRC-1]
gi|167726811|emb|CAP13597.1| DNA topoisomerase VI subunit A [Halobacterium salinarum R1]
Length = 366
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+T+++F VLC+ + +R ++ N + + I + G R L + + +L
Sbjct: 189 DTDADF--VLCVETGGMRDRLVENGFDDDYNAIVVHLGGQPARATRR----LTKRLHDEL 242
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
V D +P+ I +GS A + LA P +++G+ P D+ Y++P
Sbjct: 243 DLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPQAQFIGIRPQDIVDYDLPT--- 299
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
LS D++ L++ LE + W +++ +KAE +AL ++ +
Sbjct: 300 DPLSDSDVNALESELEDPRFQSDF-----WTEQIGLQLDIDKKAEQQALASRGLDFVTDT 354
Query: 183 YLPSKF 188
YLP +
Sbjct: 355 YLPERL 360
>gi|448357876|ref|ZP_21546571.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
gi|445648184|gb|ELZ01146.1| DNA topoisomerase VI subunit A [Natrialba chahannaoensis JCM 10990]
Length = 362
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
T+++F +L + + +R ++ N + + + +G R + + + +L
Sbjct: 185 GTDADF--ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHNEL 238
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
V D +P+ I +GS A + LA P K++G+ P+D+ +Y++P
Sbjct: 239 DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKYIGIQPADIVEYDLPT--- 295
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
LS DI+ L++ LE WE++++ + +K+E ++L + ++ +
Sbjct: 296 DPLSDSDINALESELEDPRF-----QTEYWEEQIELQLEIEKKSEQQSLASHGLDFVTDT 350
Query: 183 YLPSKFRA 190
YLP + A
Sbjct: 351 YLPERLDA 358
>gi|326468722|gb|EGD92731.1| hypothetical protein TESG_00300 [Trichophyton tonsurans CBS 112818]
Length = 303
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD-LEKYNIPKLCRQI-LSKD 128
D +P G+ I++ Y +GS RN L +P+I+W+GL S+ + N + + +S+
Sbjct: 182 DSDPDGMAIMSTYKYGSMAQVHRNADLNMPSIQWVGLQASEMMSATNHTDMSSLVPMSQR 241
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D K + L++ A +W KELQ + KAE+E L
Sbjct: 242 DRKKAEAMLKRNPSFAEDGPEPTWRKELQSLLVMNLKAELEIL 284
>gi|289580321|ref|YP_003478787.1| DNA topoisomerase [Natrialba magadii ATCC 43099]
gi|448283992|ref|ZP_21475257.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
gi|289529874|gb|ADD04225.1| DNA topoisomerase (ATP-hydrolyzing) [Natrialba magadii ATCC 43099]
gi|445572087|gb|ELY26629.1| DNA topoisomerase VI subunit A [Natrialba magadii ATCC 43099]
Length = 362
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
T+++F +L + + +R ++ N + + + +G R + + + +L
Sbjct: 185 GTDADF--ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHDEL 238
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
V D +P+ I +GS A + LA P K++G+ P+D+ +Y++P
Sbjct: 239 DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKYIGIQPADIVEYDLPT--- 295
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
LS DI+ L++ LE WE++++ + +K+E ++L + ++ +
Sbjct: 296 DPLSDSDINALESELEDPRF-----QTEYWEEQIELQLEIEKKSEQQSLASHGLDFVTDT 350
Query: 183 YLPSKFRA 190
YLP + A
Sbjct: 351 YLPERLDA 358
>gi|448627572|ref|ZP_21672038.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
gi|445758880|gb|EMA10176.1| DNA topoisomerase VI subunit A [Haloarcula vallismortis ATCC 29715]
Length = 368
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + + G R L++ + +L V
Sbjct: 197 VLCVETGGMRDRLVENGFDDEYDALVVHLGGQPARATRR----LIKRLHDELDLPVTVFT 252
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y +P L+ D+
Sbjct: 253 DGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPT---DPLADSDV 309
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +KAE +AL ++ + YLP +
Sbjct: 310 NALESELEDPRF-----QTDFWEEQIELQLDINKKAEQQALASRGLDFVTDTYLPERL 362
>gi|375084292|ref|ZP_09731298.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
gi|374741052|gb|EHR77484.1| DNA topoisomerase VI subunit A [Thermococcus litoralis DSM 5473]
Length = 381
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I + GS N+A + +LA P K++G+ D++KY + + ++ I
Sbjct: 253 DGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKG---I 309
Query: 131 SKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
K GD + N W+++L+ K G + E +AL +++A +Y
Sbjct: 310 PPNKKGGPTGDYKRIIEEMNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLEFVARRY 369
Query: 184 LPSKFRAEDWL 194
LP K E+ L
Sbjct: 370 LPEKIANEELL 380
>gi|399574436|ref|ZP_10768195.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
gi|399240268|gb|EJN61193.1| hypothetical protein HSB1_02340 [Halogranum salarium B-1]
Length = 364
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + VLC+ + +R ++ N + V+ + +G R + + + +L
Sbjct: 187 DHDIDFVLCVETGGMRDRLVENGFDEEYNVLVVHLKGQPARATRR----ITKRLHDELDL 242
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P +++G+ P D+ Y++P
Sbjct: 243 PVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAEYVGIRPQDIVDYDLPT---DP 299
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ +L + W+++++ G+KAE +AL ++ + YL
Sbjct: 300 LADSDINALES-----ELTDPRFQSEFWKEQIELQLDIGKKAEQQALASRGLDFVTDTYL 354
Query: 185 PSKF 188
P +
Sbjct: 355 PERL 358
>gi|345005806|ref|YP_004808659.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
gi|344321432|gb|AEN06286.1| Type 2 DNA topoisomerase 6 subunit A [halophilic archaeon DL31]
Length = 366
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
V+C+ + +R +I N + + + +G R +++ + +L VL
Sbjct: 195 VMCVETGGMRDRLIENGFDDEHNCLVVHLKGQPARATRR----IIKRLHDELDLPVLVFC 250
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P ++G+ P D+ Y++P L+ DI
Sbjct: 251 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPGADYVGIRPQDIVDYDLPT---DPLADSDI 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L WE++++ G+KAE +AL ++ + YLP +
Sbjct: 308 NALESELSDPRF-----QTEFWEEQIELQLDIGKKAEQQALASRGLDFVTDTYLPERL 360
>gi|389852867|ref|YP_006355101.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
gi|388250173|gb|AFK23026.1| DNA topoisomerase VI subunit A [Pyrococcus sp. ST04]
Length = 382
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E N VL + ++A+ +I + + +G A+R L+ + +
Sbjct: 192 EINVDYVLVVETAAMADRLIEEKYPKKERALIVATQGQASRGVRR----LIHRLHYEEGL 247
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
++ D +PYG +I + GS N+A + +LA P+ K++G+ D+++Y + + ++
Sbjct: 248 PIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLENVTEKL 307
Query: 125 LSKDDISKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYK 177
I K GD + N W+++L+ K G + E +AL +
Sbjct: 308 KG---IPPDKKGGPTGDYKRIIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLE 364
Query: 178 YLANKYLPSKFR 189
++A +YLP K R
Sbjct: 365 FVAKEYLPEKIR 376
>gi|337283840|ref|YP_004623314.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
gi|334899774|gb|AEH24042.1| DNA topoisomerase VI subunit A [Pyrococcus yayanosii CH1]
Length = 382
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 14/192 (7%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E N VL + ++A+ +I + + +G A+R L+ + +
Sbjct: 192 EINVDYVLVVETAAMADRLIEEKYPKRERALIIATQGQASRGVRR----LIHRLHYEEGL 247
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
++ D +PYG +I + GS N+A + +LA P K++G+ D+++Y + + ++
Sbjct: 248 PIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPGAKFVGMTMDDIKEYGLENVTEKL 307
Query: 125 LSKDDISKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYK 177
I K GD + N W+++L+ K G + E +AL +
Sbjct: 308 KG---IPPDKKGGPTGDYKRLIEELNYPWFQNKEWQRQLKLALKWGVRIEQQALANKSLE 364
Query: 178 YLANKYLPSKFR 189
++A +YLP K R
Sbjct: 365 FVAKEYLPEKIR 376
>gi|325967951|ref|YP_004244143.1| DNA topoisomerase [Vulcanisaeta moutnovskia 768-28]
gi|323707154|gb|ADY00641.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta moutnovskia
768-28]
Length = 369
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA P K++G+ +D+ Y I + D+
Sbjct: 251 DGDPYGWYIYSVYKSGSIKLSYESDRLATPEAKFVGVTATDIRTYKISDEYVIKATDRDL 310
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + + + +S+ W+KE++ + +K EIEAL + ++L + YL K
Sbjct: 311 KRAQELIR----YPWFQSD-HWKKEIELFLRTKKKVEIEALSTHGLRFLHD-YLTDKIHG 364
>gi|307596127|ref|YP_003902444.1| DNA topoisomerase [Vulcanisaeta distributa DSM 14429]
gi|307551328|gb|ADN51393.1| DNA topoisomerase (ATP-hydrolyzing) [Vulcanisaeta distributa DSM
14429]
Length = 369
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I +VY GS ++ + RLA P K++G+ +D+ Y I + D+
Sbjct: 251 DGDPYGWYIYSVYKSGSIKLSYESDRLATPEAKFVGVTATDIRTYKISDEYVIKATDRDL 310
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L + +S+ W+KE++ + +K EIEAL + ++L + YL K
Sbjct: 311 KRAQELLR----YPWFQSD-HWKKEIELFLRTKKKVEIEALSTHGLRFLHD-YLIDKIHG 364
>gi|448688770|ref|ZP_21694507.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
gi|445778640|gb|EMA29582.1| DNA topoisomerase VI subunit A [Haloarcula japonica DSM 6131]
Length = 368
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + + G R L++ + +L V
Sbjct: 197 VLCVETGGMRDRLVENGFDDEYDALVVHLGGQPARATRR----LIKRLHDELDLPVTVFT 252
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y +P L+ D+
Sbjct: 253 DGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPT---DPLADSDV 309
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +KAE +AL ++ YLP +
Sbjct: 310 NALESELEDPRF-----QTDFWEEQIELQLDINKKAEQQALASRGLDFVTETYLPERL 362
>gi|374723606|gb|EHR75686.1| DNA topoisomerase VI subunit A [uncultured marine group II
euryarchaeote]
Length = 365
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +P+ I +G+ A + LA P+ +LG+ D+ Y++P LSK D
Sbjct: 249 LDGDPWSFRIFASIAYGAIKTAHISEYLATPSATYLGITADDIVAYDLPN---DDLSKKD 305
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
I L +L ++ W++++ M + G+KAE ++L Y ++ YLP K
Sbjct: 306 IEALNA-----ELTDPRFADGWWQEQINMMLELGKKAEQQSLAKYGLDFVTETYLPEKL 359
>gi|448678347|ref|ZP_21689354.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
gi|445772334|gb|EMA23379.1| DNA topoisomerase VI subunit A [Haloarcula argentinensis DSM 12282]
Length = 368
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + + + G R L++ + +L V
Sbjct: 197 VLCVETGGMRDRLVENGFDDEYDALVVHLGGQPARATRR----LIKRLHDELDLPVTVFT 252
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y +P L+ D+
Sbjct: 253 DGDPWSYRIFGSVSYGSIKSAHLSEYLATPEAQFIGIRPEDIVEYELPT---DPLADSDV 309
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +KAE +AL ++ YLP +
Sbjct: 310 NALESELEDPRF-----QTDFWEEQIELQLDINKKAEQQALASRGLDFVTETYLPERL 362
>gi|326481332|gb|EGE05342.1| meiotic recombination protein spo11 [Trichophyton equinum CBS
127.97]
Length = 387
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD-LEKYNIPKLCRQI-LSKD 128
D +P G+ I++ Y +GS RN L +P+I+W+GL S + N + + +S+
Sbjct: 266 DSDPDGMAIMSTYKYGSMAQVHRNADLNMPSIQWVGLQASKMMSATNHTDMSSLVPMSQR 325
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D K + L++ A +W KELQ + KAE+E L
Sbjct: 326 DRKKAEAILKRNPSFAEDGPEPTWRKELQSLLVMNLKAELEIL 368
>gi|11498545|ref|NP_069773.1| DNA topoisomerase VI subunit A [Archaeoglobus fulgidus DSM 4304]
gi|3122956|sp|O29322.1|TOP6A_ARCFU RecName: Full=Type II DNA topoisomerase VI subunit A
gi|2649657|gb|AAB90299.1| DNA topoisomerase VI, subunit A (top6A) [Archaeoglobus fulgidus DSM
4304]
Length = 360
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ KY++P L+++DI
Sbjct: 245 DGDPWSYRIFASVAYGSIKSAHLSEYLATPAAQFVGIRPTDIVKYDLPA---DKLTEEDI 301
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
L L + W+KE+ + +K+E +AL Y Y+ + YLP +
Sbjct: 302 KALNAILTDPRF-----DSEFWKKEVNLQLEINKKSEQQALAKYGLDYVTDVYLPERL 354
>gi|448352990|ref|ZP_21541768.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
gi|445641057|gb|ELY94140.1| DNA topoisomerase VI subunit A [Natrialba hulunbeirensis JCM 10989]
Length = 362
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
T+++F +L + + +R ++ N + + + +G R + + + +L
Sbjct: 185 GTDADF--ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHDEL 238
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
V D +P+ I +GS A + LA P +++G+ P+D+ +Y++P
Sbjct: 239 DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQYIGIQPADIVEYDLPT--- 295
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
LS DI+ L++ LE WE++++ + +K+E ++L + ++ +
Sbjct: 296 DPLSDSDINALESELEDPRF-----QTEYWEEQIELQLEIEKKSEQQSLASHGLDFVTDT 350
Query: 183 YLPSKFRA 190
YLP + A
Sbjct: 351 YLPERLDA 358
>gi|307354510|ref|YP_003895561.1| DNA topoisomerase [Methanoplanus petrolearius DSM 11571]
gi|307157743|gb|ADN37123.1| DNA topoisomerase (ATP-hydrolyzing) [Methanoplanus petrolearius DSM
11571]
Length = 357
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Query: 1 MTNTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRC 60
+T E++ V+ + + + ++ N S + + L +G R+ +L+ +
Sbjct: 176 LTFLENDAKFVIAMETGGMYARLMENGFSEEYDAVLLHLKGQPARSTRR----MLKRLNN 231
Query: 61 KLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKL 120
+L V+ D +P+ I +GS A + L P +++G+ PSD+ YN+P
Sbjct: 232 ELGLPVVVFTDGDPWSYRIFASIAYGSIKAAHMSDILVTPGAQFVGVQPSDISMYNLPS- 290
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLA 180
L++ DI+ LK +L W ++ K G K+E +A ++
Sbjct: 291 --DHLTEGDIAALKA-----ELTDPRFDTEYWRNQINLQIKLGLKSEQQAFAARGLDFVT 343
Query: 181 NKYLPSKF 188
+YLP++
Sbjct: 344 KEYLPARL 351
>gi|156062826|ref|XP_001597335.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980]
gi|154696865|gb|EDN96603.1| hypothetical protein SS1G_01529 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 300
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P GI I++ Y +GS +A N L+VP+I+WLGL +D+ L+K D
Sbjct: 156 DFDPDGIGIMSTYKYGSVALAHENEDLSVPSIRWLGLKSTDMMHGVKEDEGLLKLTKRD- 214
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL---DMYEYKYLANKYLPSK 187
++ + + D+ W ++LQ M KAEI+ + D+ NKY+ K
Sbjct: 215 RRIAVGMLQRDVCQDGGVEKEWRRQLQIMLMLNTKAEIQVIGNGDLNTGNMSINKYIKEK 274
Query: 188 FRA 190
A
Sbjct: 275 MHA 277
>gi|388580953|gb|EIM21264.1| DNA topoisomerase IV, alpha subunit [Wallemia sebi CBS 633.66]
Length = 290
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS 126
+G D +P+G+ I Y FGS+NM L++A P +K +GL ++ + IP ++
Sbjct: 99 IGLVDSDPHGLRIFLTYKFGSENMQQEKLQMACPRLKLMGLRNAEFDLLCIPPNQALSIT 158
Query: 127 KDDISKLKTFLEKGDLV---AFVRSNASWEKELQKMSKEGEKAEIEAL 171
K + + K +++ DL+ AF + E+++M K EIEAL
Sbjct: 159 KKEKTICKKMIQRLDLMDRSAF--GVKELKDEIKQMVTYDRKFEIEAL 204
>gi|357620490|gb|EHJ72655.1| meiotic recombination protein spo11 [Danaus plexippus]
Length = 423
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL + +L+ L D +P+G I Y +GS + + LA ++ LG DL
Sbjct: 286 LLYRLVSELRLRALALVDADPHGYEIYLTYKYGSLAQSHLSDSLACTSLLLLGARYQDLM 345
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+P R L+ D KL + + L + +++L++M + G KAE+EA+
Sbjct: 346 TL-VPTAARLALTALDRRKLAALINRPYL--NTPTGDPIKEDLKRMLERGLKAELEAVVP 402
Query: 174 YEYKYLANKYLPSKFRAEDWL 194
Y +++ Y+PSK A D+L
Sbjct: 403 YSVA-MSDSYIPSKIIAADFL 422
>gi|240103483|ref|YP_002959792.1| DNA topoisomerase VI subunit A [Thermococcus gammatolerans EJ3]
gi|239911037|gb|ACS33928.1| Type II DNA topoisomerase VI, subunit A (Top6A) [Thermococcus
gammatolerans EJ3]
Length = 386
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS---- 126
D +PYG +I + GS N+A + +LA P +++G+ D+++Y + + ++
Sbjct: 258 DGDPYGWYIYSTIKQGSINLAYLSDKLATPEARFVGMTMDDIKRYGLENVTEKLKGIPPN 317
Query: 127 --KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
K LE+ + F N W+++L+ K G + E +AL +++A +YL
Sbjct: 318 KKGGPTGDYKRILEEMEYPWF--QNREWQRQLKLALKWGVRIEQQALANKSLEFVAKEYL 375
Query: 185 PSKFRAEDWL 194
P K + D L
Sbjct: 376 PEKINSGDLL 385
>gi|452207167|ref|YP_007487289.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
gi|452083267|emb|CCQ36553.1| DNA topoisomerase VI subunit A [Natronomonas moolapensis 8.8.11]
Length = 370
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + VI + +G R L E+ L V
Sbjct: 199 VLCVETGGMRDRLVENGFDEAYNVIVVHLKGQPARATRRITRRLDAEL--DLPTVVF--C 254
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P+ +++G+ P D+ Y +P LS D+
Sbjct: 255 DGDPWSYRIYASVAYGSIKSAHLSEYLATPDAEYVGIQPVDIVNYELPT---DPLSDSDV 311
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE + W ++++ G+KAE +AL ++ + YLP +
Sbjct: 312 NALESELEDPRF-----QDDYWTEQIELQLDIGKKAEQQALASRGLDFVTDTYLPERL 364
>gi|124485244|ref|YP_001029860.1| DNA topoisomerase VI subunit A [Methanocorpusculum labreanum Z]
gi|124362785|gb|ABN06593.1| DNA topoisomerase (ATP-hydrolyzing) [Methanocorpusculum labreanum
Z]
Length = 365
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L+ + +L V+ D +P+ I +GS A + LA P+ +++G+ PSD++
Sbjct: 231 MLKRMNEELGIPVVVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPSAQFIGVKPSDIQ 290
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+YN+P L++ D+S LK L W+KE+ + K+E +A
Sbjct: 291 RYNLPA---DKLTEQDVSALKAELTDPRFATDF-----WKKEINLQLEMNLKSEQQAFAS 342
Query: 174 YEYKYLANKYLPS 186
++ +YLPS
Sbjct: 343 RGLDFVTKEYLPS 355
>gi|324518385|gb|ADY47088.1| Meiotic recombination protein spo-11, partial [Ascaris suum]
Length = 388
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L+ + + + G D +P+GI I Y +G + + L++PN W+GL S++
Sbjct: 218 FLKHLTSTYQMPLFGLMDSDPHGIEIAMTYKYGGRMKSAEVGELSLPNFIWIGLSRSEIC 277
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+Y +P+ L K + K + A + + EL + + G K E+EA+
Sbjct: 278 RYPVPREQYLPLQKAEFKKTIKLCHR----AAEMQDWTLLNELNCLRESGTKLELEAVSS 333
Query: 174 YEYKYLANKYLPSKF 188
++ N L K
Sbjct: 334 IAPGFMCNGMLAEKL 348
>gi|448385303|ref|ZP_21563809.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
gi|445656798|gb|ELZ09630.1| DNA topoisomerase VI subunit A [Haloterrigena thermotolerans DSM
11522]
Length = 351
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 6 SNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKS 65
S+ +L + + +R ++ N F + + +G R + + + +L
Sbjct: 175 SDADFILAVETGGMRDRLVENGFDEEFNALIVHLKGQPARATRR----ITKRLHDELDLP 230
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
V D +P+ I +GS A + LA P ++G+ P+D+ +Y++P L
Sbjct: 231 VTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQPADIVEYDLPS---DPL 287
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
S DI+ L++ LE WE++++ G+K+E ++L ++ + YLP
Sbjct: 288 SDSDINALESELEDPRF-----QTDYWEEQIELQLDLGKKSEQQSLAARGLDFVTDTYLP 342
Query: 186 SKF 188
+
Sbjct: 343 ERL 345
>gi|433590828|ref|YP_007280324.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
gi|433305608|gb|AGB31420.1| DNA topoisomerase VI, subunit A [Natrinema pellirubrum DSM 15624]
Length = 363
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 6 SNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKS 65
S+ +L + + +R ++ N F + + +G R + + + +L
Sbjct: 187 SDADFILAVETGGMRDRLVENGFDEEFNALIVHLKGQPARATRR----ITKRLHDELDLP 242
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
V D +P+ I +GS A + LA P ++G+ P+D+ +Y++P L
Sbjct: 243 VTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQPADIVEYDLPS---DPL 299
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
S DI+ L++ LE WE++++ G+K+E ++L ++ + YLP
Sbjct: 300 SDSDINALESELEDPRF-----QTDYWEEQIELQLDLGKKSEQQSLAARGLDFVTDTYLP 354
Query: 186 SKF 188
+
Sbjct: 355 ERL 357
>gi|453083573|gb|EMF11618.1| DNA topoisomerase IV, alpha subunit [Mycosphaerella populorum
SO2202]
Length = 341
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQ-- 123
V G D +P GI IL+ Y GSK +A + VP +KWLGL L Q
Sbjct: 216 VYGLADFDPDGIAILSTYKRGSKKLAHESKEHVVPQLKWLGLRSEHLHADEFDTHAAQGR 275
Query: 124 -ILSKDDISKLKTFLEKGDLVAFVRSNASWE-KELQKMSKEGEKAEIEALD 172
LSK D SK +++ + +A E +ELQ M KAE++ LD
Sbjct: 276 LTLSKRDRSKATMMIDRE--IDIDDGDALMERRELQTMLMLNTKAELQLLD 324
>gi|448309742|ref|ZP_21499597.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
gi|445589408|gb|ELY43641.1| DNA topoisomerase VI subunit A [Natronorubrum bangense JCM 10635]
Length = 363
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + + +G R +++ + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARATRR----IIKRLHDELDLPVTVFA 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPAAQYIGIQPADIVEYDLPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ + G+K+E ++L ++ YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLEIGKKSEQQSLAARGLDFVTETYLPERL 357
>gi|229582220|ref|YP_002840619.1| DNA topoisomerase VI subunit A [Sulfolobus islandicus Y.N.15.51]
gi|228012936|gb|ACP48697.1| DNA topoisomerase (ATP-hydrolyzing) [Sulfolobus islandicus
Y.N.15.51]
Length = 389
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 12/149 (8%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG-----LF 108
+R + +LK V D +PYG +I +V+ GS +++ + RLA P+ K+LG +F
Sbjct: 244 FVRRLNEELKLPVYILTDADPYGWYIFSVFRIGSISLSYESERLATPDSKFLGVSMGDIF 303
Query: 109 PSDLEKYNIPKLCRQ---ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ +K + + R+ I +KD + +K E + F +W++E+ + K
Sbjct: 304 GNSRKKPYLSEAERKNYIIKAKD--ADIKRAEEIKNYEWF--KTKAWQEEINTFLQRKAK 359
Query: 166 AEIEALDMYEYKYLANKYLPSKFRAEDWL 194
EIEA+ K+L +Y+P K +D++
Sbjct: 360 LEIEAMASKGLKFLGFQYIPEKITNKDYI 388
>gi|448302924|ref|ZP_21492874.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
gi|445593931|gb|ELY48098.1| DNA topoisomerase VI subunit A [Natronorubrum sulfidifaciens JCM
14089]
Length = 363
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 81/178 (45%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + + +G R +++ + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARATRR----IIKRLHDELDLPVTVFA 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPAAQYIGIQPADIVEYDLPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ + G+K+E ++L ++ YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLEIGKKSEQQSLAARGLDFVTETYLPERL 357
>gi|409095996|ref|ZP_11216020.1| DNA topoisomerase VI subunit A [Thermococcus zilligii AN1]
Length = 385
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 4 TESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLK 63
+E N L + ++A+ +I S + + +G A+R L+ + +
Sbjct: 194 SEINVDYALVVETAAMADRLIEEKYSKKENALIIATQGQASRGVRR----LIHRLHYEEG 249
Query: 64 KSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQ 123
++ D +PYG +I + GS N+A + +LA P K++G+ D+++Y + + +
Sbjct: 250 LPIIVFTDGDPYGWYIYSTIKLGSINLAYLSEKLATPEAKFVGMTMDDIKRYGLENVTEK 309
Query: 124 ILSKDDISKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEY 176
+ I K GD + N W+++L+ G + E +AL
Sbjct: 310 LKG---IPPSKKGGPTGDYKRIIEEMNYPWFQNEEWQRQLKLALDWGVRIEQQALANKSL 366
Query: 177 KYLANKYLPSKFRAEDWL 194
+++A +YLP K D L
Sbjct: 367 EFVAKEYLPEKINNGDLL 384
>gi|393245080|gb|EJD52591.1| DNA topoisomerase IV, alpha subunit, partial [Auricularia delicata
TFB-10046 SS5]
Length = 300
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D + +G+ I + Y +GS+++ RL ++W+G++ +DL + I K L
Sbjct: 162 LLALVDADAHGVDIFSCYKYGSRSLQHEQDRLQALRLEWIGVWSTDLNRLGIDKNELLPL 221
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
S D+ K + L + V W +EL M + KAE+E L
Sbjct: 222 SAHDLKKAISLLLSPNCV----QEPLWRRELMHMIRFRRKAEVEIL 263
>gi|284162141|ref|YP_003400764.1| DNA topoisomerase [Archaeoglobus profundus DSM 5631]
gi|284012138|gb|ADB58091.1| DNA topoisomerase (ATP-hydrolyzing) [Archaeoglobus profundus DSM
5631]
Length = 357
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P+ ++G+ PSD+ KY +P L+ +DI
Sbjct: 240 DGDPWSYRIYASVAYGSIKSAHLSEYLATPSAMFVGIRPSDILKYKLPS---DKLTDEDI 296
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
L L + W +E++ + G K+E +AL Y ++ + YLP +
Sbjct: 297 KALNAILSDPRF-----DSDFWRREIKLQLELGRKSEQQALAKYGLSFVTDVYLPERL 349
>gi|409075163|gb|EKM75546.1| hypothetical protein AGABI1DRAFT_79675 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 404
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPN-IKWLGLFPSDLEKYNIPKLCRQI 124
++ D +PYG+ IL+VY +GS+ + N RLA + + W+G++ S+ I K
Sbjct: 197 IMALVDGDPYGLDILSVYRYGSRALKHENERLAAGDRVVWIGIWASEFSSLGIDKDKLLP 256
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASW 152
+SK D K F DL+A V +W
Sbjct: 257 ISKGDEKKASCFAT--DLLARVTEAVTW 282
>gi|332157795|ref|YP_004423074.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
gi|331033258|gb|AEC51070.1| DNA topoisomerase VI subunit A [Pyrococcus sp. NA2]
Length = 380
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I + GS N+A + +LA P+ K++G+ D+++Y + + ++ I
Sbjct: 252 DGDPYGWYIYSTIKRGSINLAYLSEKLATPDAKFVGMTMDDIKEYGLENVTEKLKG---I 308
Query: 131 SKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
K GD + + W+++L+ K G + E +AL +++A +Y
Sbjct: 309 PPDKKGGPTGDYKRLIEEMNYPWFQDKEWQRQLKLALKWGVRIEQQALANKSLEFVAKEY 368
Query: 184 LPSKFR 189
LP K R
Sbjct: 369 LPEKIR 374
>gi|448346429|ref|ZP_21535314.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
gi|445632632|gb|ELY85843.1| DNA topoisomerase VI subunit A [Natrinema altunense JCM 12890]
Length = 363
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDEEYDALIVHLKGQPARATRR----ITKRLHDELGLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P ++G+ P+D+ +Y +P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQPADIVEYELPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WEK+++ G+K+E ++L + ++ YLP +
Sbjct: 305 NALESELEDPRF-----QTEYWEKQIELQLDLGKKSEQQSLASHGLDFVTETYLPERL 357
>gi|452824698|gb|EME31699.1| DNA topoisomerase [Galdieria sulphuraria]
Length = 364
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFG--------SKNMAGRNLRLAVP-NIKW 104
L + I +L+ LG D NP+G+ +L Y ++ + R + P +I W
Sbjct: 214 LFQRIARELRLPCLGLVDYNPHGLALLQTYRSSLAKEASDLDNQLSCSSWRESTPLHIYW 273
Query: 105 LGLFPSDLEKYNIPKLCRQILSKDD---ISKLKTFLEKGDLVAFVRSNASWEKELQKMSK 161
LGL S L + N+ R+ L++ D ++KL+ L+ R+ A E+EL M
Sbjct: 274 LGLHFSQLSQLNLWDKFRKPLTRRDRVLLTKLRNQLQ----TKAGRNLAVLEQELNAM-- 327
Query: 162 EGEKAEIEALDMYEYKYLANKYLPSK-FRAED 192
+ K E++A+ + YL+ YLPS F ED
Sbjct: 328 QNGKVELQAIYSLGHSYLSRTYLPSAIFHYED 359
>gi|322370368|ref|ZP_08044927.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
gi|320550076|gb|EFW91731.1| DNA topoisomerase (ATP-hydrolyzing) [Haladaptatus paucihalophilus
DX253]
Length = 364
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + I + G R L + + +L V
Sbjct: 193 VLCVETGGMRDRLVENGFDEEYNTIIVHLGGQPARATRR----LTKRLHEELDLPVTVFT 248
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P K++G+ P D+ +Y++P LS D
Sbjct: 249 DGDPWSYRIYGSVAYGSIKSAHLSDYLATPEAKFIGIQPKDIVEYDLPT---DPLSDSDK 305
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +K+E +AL + ++ + YLP +
Sbjct: 306 NALESELEDPRY-----QTDYWEEQIELQLDIEKKSEQQALASHGLDFVTDTYLPERL 358
>gi|448730192|ref|ZP_21712502.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
gi|445793923|gb|EMA44488.1| DNA topoisomerase VI subunit A [Halococcus saccharolyticus DSM
5350]
Length = 367
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N + + I + +G R + + + +L V+
Sbjct: 196 VLCVETGGMRDRLVENGFDDDYGTIVVHLKGQPARATRR----ITKRLHDELDLPVVVFT 251
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS DI
Sbjct: 252 DGDPWSYRIYGSVAYGSIKSAHLSDYLATPEAQFIGIQPEDIVEYDLPT---DPLSDSDI 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ +L W ++++ +KAE ++L ++ + YLP + A
Sbjct: 309 NALES-----ELTDPRFQTDYWREQIELQLDIEKKAEQQSLAARGLDFVTDTYLPERLDA 363
>gi|242399083|ref|YP_002994507.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
gi|242265476|gb|ACS90158.1| Type II DNA topoisomerase VI subunit A [Thermococcus sibiricus MM
739]
Length = 381
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 14/197 (7%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E N VL + ++A+ +I + + +G A+R L+ + +
Sbjct: 191 EINVDYVLVVETAAMADRLIEEKYPKKEKALVVATQGQASRGVRR----LIHRLHYEEGL 246
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
++ D +PYG +I + GS N+A + +LA P K++G+ D++KY + + ++
Sbjct: 247 PIIVFTDGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKL 306
Query: 125 LSKDDISKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYK 177
I K GD + N W+++L+ + G + E +AL +
Sbjct: 307 KG---IPPNKKGGPTGDYKRIIEEMNYPWFQNKEWQRQLKLALEWGVRIEQQALANKSLE 363
Query: 178 YLANKYLPSKFRAEDWL 194
++A +YLP K E+ L
Sbjct: 364 FVAKEYLPEKIGNEELL 380
>gi|305662509|ref|YP_003858797.1| DNA topoisomerase [Ignisphaera aggregans DSM 17230]
gi|304377078|gb|ADM26917.1| DNA topoisomerase (ATP-hydrolyzing) [Ignisphaera aggregans DSM
17230]
Length = 392
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL- 112
+R + +LK V D +PYG +I +V+ GS ++ + RLA P+ K+LG+ SD+
Sbjct: 245 FVRRLNEELKLPVYILTDADPYGWYIYSVFRIGSITLSYESERLATPSAKFLGVSMSDIF 304
Query: 113 ---EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSN----------ASWEKELQKM 159
P L S+ K F+ K R+ W +E+
Sbjct: 305 GDKTTGKKPYLTE--------SERKNFIIKAKKTDIKRAQELLNYEWFKTEKWTREINMF 356
Query: 160 SKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
++ K EIEAL +L + Y+P+K +D++
Sbjct: 357 LEKQSKLEIEALTGKGLYFLMDNYIPTKIETKDFI 391
>gi|383130742|gb|AFG46125.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
Length = 52
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 145 FVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
FV+ + W EL M K +KAEI+AL + ++YL+ YLP K + DW+
Sbjct: 3 FVKKSPGWVDELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQRDWI 52
>gi|448311914|ref|ZP_21501667.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
gi|445603535|gb|ELY57497.1| DNA topoisomerase VI subunit A [Natronolimnobius innermongolicus
JCM 12255]
Length = 362
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+T+++F +L + + +R ++ N + + + + +G R + + + +L
Sbjct: 185 DTDADF--ILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARATRR----ITKRLHDEL 238
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
V D +P+ I +GS A + LA P K++G+ P+D+ +Y +P
Sbjct: 239 GLPVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPADIVEYELPT--- 295
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
LS D++ L++ LE WE++++ + +K+E ++L + ++ +
Sbjct: 296 DPLSDSDVNALESELEDPRF-----QTDYWEEQIELQLEIEKKSEQQSLASHGLDFVTDT 350
Query: 183 YLPSKF 188
YLP +
Sbjct: 351 YLPERL 356
>gi|315230262|ref|YP_004070698.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
gi|315183290|gb|ADT83475.1| DNA topoisomerase VI subunit A [Thermococcus barophilus MP]
Length = 381
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG +I + GS N+A + +LA P K++G+ D++KY + + ++ I
Sbjct: 253 DGDPYGWYIYSTIKQGSINLAYLSEKLATPEAKFVGMTMDDIKKYGLENVTEKLKG---I 309
Query: 131 SKLKTFLEKGDLVAFVR-------SNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKY 183
K GD + W+++L+ + G + E +AL +++A KY
Sbjct: 310 PPNKKGGPTGDYKRIIEEMNYPWFQTKEWQRQLKLALQWGVRIEQQALANKSLEFVAKKY 369
Query: 184 LPSKFRAEDWL 194
LP K E+ L
Sbjct: 370 LPEKIANEELL 380
>gi|389582748|dbj|GAB65485.1| topoisomerase [Plasmodium cynomolgi strain B]
Length = 334
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 8/123 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG I Y G K + A +++W+G+ D++ IPK LSK D
Sbjct: 218 DYDPYGFRIYLSYKEGCK--TNEDAIFACTDMRWVGMNSQDMDL--IPKEALLELSKRDK 273
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L+ L GD + R +A KE+ +M K K EIEA++ + +YL +
Sbjct: 274 NVLRNML-NGDRL---RCSAKVRKEITQMEKLSRKFEIEAMESLGMDFFIRQYLIRRVMR 329
Query: 191 EDW 193
+W
Sbjct: 330 REW 332
>gi|71483085|gb|AAZ32518.1| DNA topoisomerase VI subunit A [uncultured euryarchaeote Alv-FOS4]
Length = 362
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL+ + +L V+ D +P+ I +G+ A + LA P +++G+ SD+
Sbjct: 229 LLKRMNEELGLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDIL 288
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNAS-WEKELQKMSKEGEKAEIEALD 172
Y++P L+ DI+ LK L+ R N W +E++ M +KAE +AL
Sbjct: 289 NYDLPT---DKLNDRDIAALKAELKD------PRFNTPFWNEEIRLMLDIKKKAEQQALA 339
Query: 173 MYEYKYLANKYLPSKF 188
Y Y+ + YLP K
Sbjct: 340 KYGLDYVTDTYLPEKL 355
>gi|395645300|ref|ZP_10433160.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
gi|395442040|gb|EJG06797.1| Type 2 DNA topoisomerase 6 subunit A [Methanofollis liminatans DSM
4140]
Length = 363
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
V+ L + + +I N + + +G R+ LL+ I + V+
Sbjct: 192 VIALETGGMYARLIENGFDEEYGAALVHLKGQPARSTRR----LLKRIHEEFGLPVVVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ PSD+ Y++P LS+ D+
Sbjct: 248 DGDPWSYRIYASVAYGSIKAAHMSELLATPQAQFIGVQPSDIRDYDLPA---DHLSEQDV 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ LK L + W +++ + G K+E +A ++ +YLP++
Sbjct: 305 AALKAELTDPRF-----ATDYWREQIALQLQMGLKSEQQAFAARGLDFVTREYLPARL 357
>gi|449298114|gb|EMC94131.1| hypothetical protein BAUCODRAFT_74427 [Baudoinia compniacensis UAMH
10762]
Length = 395
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD-LEKYNIPKLCR-- 122
V G D +P G+ IL Y GS +A N L VP +KWLGL L + + P +
Sbjct: 249 VYGLVDFDPDGLAILATYKHGSFALAHENSSLQVPQLKWLGLRSEHILMESDDPHASQGL 308
Query: 123 QILSKDDISKLKTFLEK---GDLVAFVRSNA-SWEKELQKMSKEGEKAEIEALD 172
+L+ D K + LE+ G + + +++ W LQ M KAE++ LD
Sbjct: 309 MMLTPRDRGKARKMLERSVPGSISGALEADSEEWRGALQVMLMLNVKAELQLLD 362
>gi|448323107|ref|ZP_21512571.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
gi|445600293|gb|ELY54306.1| DNA topoisomerase VI subunit A [Natronococcus amylolyticus DSM
10524]
Length = 363
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+ +++F +L + + +R ++ N + + + +G R + + + +L
Sbjct: 186 DADADF--ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHDEL 239
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
V D +P+ I +GS A + LA P +++G+ P+D+ +Y++P
Sbjct: 240 DLPVTVFADGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQYIGIQPADIVEYDLPT--- 296
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
LS DI+ L++ LE WE++++ + G+K+E ++L ++
Sbjct: 297 DPLSDSDINALESELEDPRF-----QTDYWEEQIELQLEIGKKSEQQSLAARGLDFVTET 351
Query: 183 YLPSKF 188
YLP +
Sbjct: 352 YLPERL 357
>gi|361068649|gb|AEW08636.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130714|gb|AFG46111.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130716|gb|AFG46112.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130718|gb|AFG46113.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130720|gb|AFG46114.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130722|gb|AFG46115.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130724|gb|AFG46116.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130726|gb|AFG46117.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130728|gb|AFG46118.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130730|gb|AFG46119.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130732|gb|AFG46120.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130734|gb|AFG46121.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130736|gb|AFG46122.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130738|gb|AFG46123.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130740|gb|AFG46124.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130744|gb|AFG46126.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130746|gb|AFG46127.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
gi|383130748|gb|AFG46128.1| Pinus taeda anonymous locus CL1001Contig2_03 genomic sequence
Length = 52
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 145 FVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
FV+ + W EL M K KAEI+AL + ++YL+ YLP K + DW+
Sbjct: 3 FVKKSPGWVDELNLMVKTKHKAEIQALSSFGFQYLSEVYLPLKLQQRDWI 52
>gi|312089432|ref|XP_003146245.1| type IIB DNA topoisomerase [Loa loa]
gi|307758593|gb|EFO17827.1| type IIB DNA topoisomerase [Loa loa]
Length = 359
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 66 VLGSFDCNPYGIHILTVYMFG--SKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQ 123
+ G DC+P+GI I Y +G SK N L+ + +W+GL L K+ I +
Sbjct: 227 LFGLLDCDPHGIEIAMTYKYGNCSKKFDVGNRTLS--HFEWIGLSRCKLPKFVISAVQFL 284
Query: 124 ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
L K +++KL+ ++ A + NA+ +EL +M + G K E+EA+
Sbjct: 285 PLQKRELAKLEKLCQR----AAILGNAALFEELIRMRQCGNKLELEAV 328
>gi|159464146|ref|XP_001690303.1| topoisomerase [Chlamydomonas reinhardtii]
gi|158284291|gb|EDP10041.1| topoisomerase [Chlamydomonas reinhardtii]
Length = 1873
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILS 126
+G D NP G+ IL Y +GS M +P ++WLG+ L L R L+
Sbjct: 986 VGLVDFNPAGVVILATYKYGSDRMGPEGRAHPLPRLRWLGVRGRHLAGVGEAHLQR--LT 1043
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D + +++ E+ + W EL M + G K +IEAL
Sbjct: 1044 ARDTALIRSLRER-----LSAAEPGWVAELDAMEQAGYKGDIEAL 1083
>gi|374630622|ref|ZP_09703007.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
gi|373908735|gb|EHQ36839.1| Type 2 DNA topoisomerase 6 subunit A [Methanoplanus limicola DSM
2279]
Length = 362
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L+ + +L V+ D +P+ I +GS A + LA P +++G+ PSD+
Sbjct: 230 VLKRLNSELGLPVVIFTDGDPWSYRIFASIAYGSIKAAHMSEILATPGAQFIGVQPSDIS 289
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++P L++ DI+ L K +L W KE+ K G K+E +A
Sbjct: 290 NYDLPA---DKLTEGDIAAL-----KAELTDPRFDTEYWRKEINLQLKLGLKSEQQAFAS 341
Query: 174 YEYKYLANKYLPSKF 188
++ YLP +
Sbjct: 342 RGLDFVTKDYLPDRL 356
>gi|308810407|ref|XP_003082512.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
gi|116060981|emb|CAL56369.1| putative SPO11 protein (ISS) [Ostreococcus tauri]
Length = 410
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 7/122 (5%)
Query: 50 KIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFP 109
K + LL + G D NP+G IL Y GSK + VP + W+GL
Sbjct: 273 KFLWLLETVLEGSGAKFFGLVDWNPHGAWILATYSSGSKRSSIDAAEFVVP-LTWIGLRS 331
Query: 110 SDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
DL ++ Q L+ D + ++ LE D S+ +EL+ M G+KA+IE
Sbjct: 332 EDLR--DVAADAMQDLTTRDAALIRNALEGDDAHPLC----SFREELRIMHDVGKKADIE 385
Query: 170 AL 171
AL
Sbjct: 386 AL 387
>gi|448473864|ref|ZP_21601925.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
gi|445818443|gb|EMA68300.1| DNA topoisomerase VI subunit A [Halorubrum aidingense JCM 13560]
Length = 361
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P LS D+
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQPADIVEYDLPA---DPLSDSDV 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ LE WE++++ G+K+E ++L ++ + YLP + A
Sbjct: 303 NALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLDA 357
>gi|448739099|ref|ZP_21721117.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
gi|445800248|gb|EMA50606.1| DNA topoisomerase VI subunit A [Halococcus thailandensis JCM 13552]
Length = 366
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+LC+ + +R ++ N + + I + +G R + + + +L V+
Sbjct: 195 ILCVETGGMRDRLVENGFDDDYGTIVVHLKGQPARATRR----ITKRLHDELDLPVVVFT 250
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y++P L+ DI
Sbjct: 251 DGDPWSYRIYGSVAYGSIKSAHLSDYLATPEAQFVGIQPTDIVEYDLPT---DPLADSDI 307
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L W ++++ +KAE +AL ++ + YLP +
Sbjct: 308 NALESELSDPRF-----QTDYWREQIELQLDIEKKAEQQALASRGLDFVTDTYLPERL 360
>gi|154151278|ref|YP_001404896.1| DNA topoisomerase VI subunit A [Methanoregula boonei 6A8]
gi|153999830|gb|ABS56253.1| Spo11/DNA topoisomerase VI, subunit A [Methanoregula boonei 6A8]
Length = 362
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
V+ + + + +I N I L +G R+ LL I +L
Sbjct: 191 VIAMETGGMYDRLIENGFDEEHNAILLHLKGQPARSTRR----LLNRISQTWNLPILVFT 246
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + LA P ++LGL PSD+ YN+P LS D+
Sbjct: 247 DGDPWSYRIYASVAYGAIKSAHMSELLATPKAQFLGLQPSDIRDYNLPS---DKLSDKDV 303
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
L +L + W+K++ + G K+E +A ++ KYLP++
Sbjct: 304 EAL-----NAELTDPRFATDYWKKQINLQLELGLKSEQQAFAARGLDFVTKKYLPARL 356
>gi|448733641|ref|ZP_21715883.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
gi|445802161|gb|EMA52468.1| DNA topoisomerase VI subunit A [Halococcus salifodinae DSM 8989]
Length = 412
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 77/180 (42%), Gaps = 12/180 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
VLC+ + +R ++ N F I + G R L + + +L V+
Sbjct: 196 VLCVETGGMRDRLVENGFDEDFNTIVVHLGGQPARATRR----LTKRLHDELDLPVVVFT 251
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P L+ D+
Sbjct: 252 DGDPWSYRIYGSVAYGSIKSAHLSNYLATPEAQFIGIQPEDIVEYDLPT---DPLADSDV 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ L W ++++ +KAE ++L ++ + YLP + A
Sbjct: 309 NALESELTDPRF-----QTDYWREQIELQLDINKKAEQQSLAARGLDFVTDTYLPERLDA 363
>gi|435848696|ref|YP_007310946.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
gi|433674964|gb|AGB39156.1| DNA topoisomerase VI, subunit A [Natronococcus occultus SP4]
Length = 363
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 86/188 (45%), Gaps = 14/188 (7%)
Query: 3 NTESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKL 62
+T+++F +L + + +R ++ N + + + +G R + + + +L
Sbjct: 186 DTDADF--ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHDEL 239
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
V D +P+ I +GS A + LA P +++G+ P+D+ +Y++P
Sbjct: 240 DLPVTVFADGDPWSYRIYASVAYGSIKSAHLSEYLATPEAQYIGIQPADIVEYDLPT--- 296
Query: 123 QILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANK 182
LS DI+ L++ L+ WE++++ + +K+E ++L ++ +
Sbjct: 297 DPLSDSDINALESELDDPRF-----QTDYWEEQIELQLEIEKKSEQQSLASRGLDFVTDT 351
Query: 183 YLPSKFRA 190
YLP + A
Sbjct: 352 YLPERLDA 359
>gi|170586006|ref|XP_001897772.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
gi|158594796|gb|EDP33375.1| Type IIB DNA topoisomerase family protein [Brugia malayi]
Length = 349
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 66 VLGSFDCNPYGIHILTVYMFG--SKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQ 123
+ G DC+P+GI I Y +G SK N L+ + +W+GL +L K+ I +
Sbjct: 222 LFGLLDCDPHGIEIAMTYKYGNCSKTFGVENQTLS--HFEWIGLSRCELPKFVISAVQFL 279
Query: 124 ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
L K +++K++ ++ ++ N + +EL +M + G K E+EA+
Sbjct: 280 PLQKSELAKVEKLCQRTAILG----NTALLEELIRMRQCGNKLELEAV 323
>gi|448439380|ref|ZP_21588021.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
gi|445691431|gb|ELZ43622.1| DNA topoisomerase VI subunit A [Halorubrum saccharovorum DSM 1137]
Length = 361
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS D+
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPS---DPLSDSDV 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ LE WE++++ G+K+E ++L ++ + YLP + A
Sbjct: 303 NALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLDA 357
>gi|350640202|gb|EHA28555.1| Hypothetical protein ASPNIDRAFT_189316 [Aspergillus niger ATCC
1015]
Length = 326
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIP----KLCRQILS 126
D +P G+ I+ Y +GS A N L VP + WLGL +D+ P L R L+
Sbjct: 201 DGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLADVVAGAGPLGDDTLLR--LT 258
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL-DM 173
K D K L K + W ELQ+M KAE+E L DM
Sbjct: 259 KRDRKKAIAMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEILYDM 306
>gi|222479740|ref|YP_002565977.1| DNA topoisomerase VI subunit A [Halorubrum lacusprofundi ATCC
49239]
gi|222452642|gb|ACM56907.1| Spo11/DNA topoisomerase VI subunit A domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 361
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 80/186 (43%), Gaps = 12/186 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + L + + +R ++ N + + + +G R + + + +L
Sbjct: 184 DDDIDFALAVETGGMRDRLVENGFDEAYNCLVIHLKGQPARATRR----ITKRVHDELDV 239
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V D +P+ I +GS A + LA P +++G+ P D+ +Y++P
Sbjct: 240 PVAVFADGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPA---DP 296
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ DI+ L++ LE WE++++ G+K+E ++L ++ + YL
Sbjct: 297 LADSDINALESELEDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYL 351
Query: 185 PSKFRA 190
P + A
Sbjct: 352 PERLDA 357
>gi|258549085|ref|XP_002585415.1| topoisomerase, putative [Plasmodium falciparum 3D7]
gi|254922468|gb|ACT83903.1| topoisomerase, putative [Plasmodium falciparum 3D7]
Length = 336
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 32/189 (16%)
Query: 27 TVSNFFIVIRLIREGAANRTCENKIVILL---------------REIRCKLKKSV----- 66
+++N+ IV+ + + CENKI +L R+I C+L +
Sbjct: 158 SMANYIIVVE--KYSVYQKLCENKIWNILPSILITGKGFPDLSTRKIICELMHTFQLECV 215
Query: 67 -LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+G FD P+GI I Y G K+ NL A N+KW+G+ +D+ + PK L
Sbjct: 216 YVGDFD--PHGIKIYLNYKEGIKSNDKNNL-YACKNMKWIGMCSNDIVFF--PKESLISL 270
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLP 185
+K + + L+ + S + + E+ +M + K EIEA+ + KYL
Sbjct: 271 TKKEKNILQNLKNNKKFL----STSQLKNEIIQMDRINYKFEIEAVQYLGMDFFIKKYLI 326
Query: 186 SKFRAEDWL 194
K ++WL
Sbjct: 327 KKILRKEWL 335
>gi|110668560|ref|YP_658371.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|385804025|ref|YP_005840425.1| DNA topoisomerase VI subunit A (type II DNA topoisomerase)
[Haloquadratum walsbyi C23]
gi|109626307|emb|CAJ52765.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi DSM 16790]
gi|339729517|emb|CCC40780.1| DNA topoisomerase VI subunit A [Haloquadratum walsbyi C23]
Length = 364
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+ + VLC+ + +R +I N + + + + +G R + + + +L
Sbjct: 187 DHDIDFVLCVETGGMRDRLIENGFDDMYNCLIVHLKGQPARATRR----ITKRLHDELSV 242
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +GS A + LA P +++G+ P+D+ +Y +P
Sbjct: 243 PVVVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPEARFIGIQPTDIVEYELPT---DP 299
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ D++ L++ LE + W ++++ +KAE ++L ++ YL
Sbjct: 300 LADSDVNALESELEDPRF-----QSEYWTEQIELQLDIEKKAEQQSLASRGLDFVTETYL 354
Query: 185 PSKF 188
P +
Sbjct: 355 PERL 358
>gi|219852783|ref|YP_002467215.1| DNA topoisomerase VI subunit A [Methanosphaerula palustris E1-9c]
gi|219547042|gb|ACL17492.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosphaerula palustris
E1-9c]
Length = 362
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L I K K + D +P+ I +GS A + LA P +++G+ PSD+
Sbjct: 230 VLHMIHEKFKLPITVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPQAQFIGVQPSDIS 289
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++P LS+ D+ LK+ L W ++ + + G K+E +A
Sbjct: 290 DYDLPS---DTLSERDVLALKSELSDPRF-----DTEYWRYQIGRQLEIGIKSEQQAFAA 341
Query: 174 YEYKYLANKYLPSKF 188
Y+ +YLP++
Sbjct: 342 RGLDYVTKEYLPARL 356
>gi|397772615|ref|YP_006540161.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|448340243|ref|ZP_21529216.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
gi|397681708|gb|AFO56085.1| DNA topoisomerase [Natrinema sp. J7-2]
gi|445630549|gb|ELY83810.1| DNA topoisomerase VI subunit A [Natrinema gari JCM 14663]
Length = 363
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHDELGLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P ++G+ P+D+ +Y +P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQPADIVEYELPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L + ++ YLP +
Sbjct: 305 NALESELEDPRF-----QTEYWEEQIELQLDLGKKSEQQSLASHGLDFVTETYLPERL 357
>gi|448339320|ref|ZP_21528348.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
gi|445620549|gb|ELY74045.1| DNA topoisomerase VI subunit A [Natrinema pallidum DSM 3751]
Length = 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDEQYNALIVHLKGQPARATRR----ITKRLHDELGLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P ++G+ P+D+ +Y +P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQPADIVEYELPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L + ++ YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLDLGKKSEQQSLASHGLDFVTETYLPERL 357
>gi|393217646|gb|EJD03135.1| topoisomerase acting in meiosis [Fomitiporia mediterranea MF3/22]
Length = 339
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+L D + YG+ I++VY +GS +M N LA ++W+G+ + + + +
Sbjct: 195 ILALVDADAYGLDIVSVYKYGSMSMQHENESLAAERVEWIGVSAGEALSLGVDRDAFLPI 254
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D K + L+ + ++ ++W +EL +M KAE E L
Sbjct: 255 TVHDQRKAISLLQ-----SRIQMPSAWRRELMQMLHTRRKAETEVL 295
>gi|448330003|ref|ZP_21519296.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
gi|445612991|gb|ELY66706.1| DNA topoisomerase VI subunit A [Natrinema versiforme JCM 10478]
Length = 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHDELDLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P ++G+ P+D+ +Y +P L+ DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEADFIGIQPADIVEYELPT---DPLADSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ G+K+E ++L + ++ + YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLDLGKKSEQQSLASHGLDFVTDTYLPERL 357
>gi|336254127|ref|YP_004597234.1| type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
gi|335338116|gb|AEH37355.1| Type 2 DNA topoisomerase 6 subunit A [Halopiger xanaduensis SH-6]
Length = 363
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARATRR----ITKRLHDELDLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y +P LS DI
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQPADIVEYELPT---DPLSDSDI 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ LE WE++++ + +K+E ++L + ++ YLP + A
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLEIEKKSEQQSLASHGLDFVTETYLPERLDA 359
>gi|358371609|dbj|GAA88216.1| meiotic recombination protein Spo11 [Aspergillus kawachii IFO 4308]
Length = 401
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIP----KLCRQILS 126
D +P G+ I+ Y +GS A N L VP + WLGL D+ P L R L+
Sbjct: 281 DGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLKIPDVVAGADPLEDNTLIR--LT 338
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL-DM 173
K D K+ L + + A W ELQ++ KAE E L DM
Sbjct: 339 KRDRKKIVAMLSRNPIWAADGPEPEWRIELQRLLILNVKAETEILYDM 386
>gi|403168183|ref|XP_003327852.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167387|gb|EFP83433.2| hypothetical protein PGTG_08619 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 454
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 18/131 (13%)
Query: 43 ANRTCENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNI 102
A+R E++ V+ K + +L DC+P+G+ I VY FGS++M+ + L
Sbjct: 301 ASRLSEHQEVV-------KRRVPILILVDCDPHGLDIAKVYKFGSQSMS-FHPGLRAKQA 352
Query: 103 KWLGLFPSDLEKYNI--PKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMS 160
+W+G+ SD ++NI +C L D K + L D++ SW+ E+++M
Sbjct: 353 EWIGISSSDWNEFNIDCDLICPMTLH--DYKKADSLL-MSDVLP-----ESWKNEVRRMK 404
Query: 161 KEGEKAEIEAL 171
+ +K+EI+ L
Sbjct: 405 ETRKKSEIQIL 415
>gi|291333526|gb|ADD93223.1| DNA topoisomerase VI subunit A [uncultured archaeon
MedDCM-OCT-S08-C37]
Length = 207
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +P+ I +G+ A + LA P+ +LG+ D+ Y++P LSK D
Sbjct: 91 LDGDPWSFRIFASIAYGAIKTAHISEYLATPSATYLGITADDIVAYDLPS---DDLSKKD 147
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
I L L +++ W+ ++ M + +KAE ++L Y ++ YLP K
Sbjct: 148 IEALNAELSDPRF-----ADSWWQDQINMMLELDKKAEQQSLAKYGLDFVTETYLPEKL 201
>gi|330507581|ref|YP_004384009.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
gi|328928389|gb|AEB68191.1| DNA topoisomerase VI subunit A [Methanosaeta concilii GP6]
Length = 375
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 12/179 (6%)
Query: 10 IVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGS 69
+V+ + + + +I N + I + +G R+ +++ + +L V+
Sbjct: 203 MVMAIETGGMYARLIENGFDEEYNAILVHIKGQPARSTRR----IIKRLNTELNLPVVVF 258
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD 129
D +P+ I +G+ A + L P ++LG+ PSD+ YN L L+ D
Sbjct: 259 TDGDPWSYRIFASIAYGAIKSAHLSDHLVTPKARFLGVQPSDIVDYN---LSTDKLTDRD 315
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ LK+ L +N WEK++ +KAE +A ++ YLP +
Sbjct: 316 LQALKSELSDPRF-----ANPYWEKQIHLQIDLKKKAEQQAFAGKGLDFVTKTYLPDRL 369
>gi|392593676|gb|EIW83001.1| DNA topoisomerase IV, alpha subunit, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 298
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIP-KLCRQI 124
+L D +P+G+ IL+VY FGS +M +LA I+ +G++ S+L + I
Sbjct: 156 ILALVDGDPHGLDILSVYKFGSASMKHEVDKLAANRIESVGIWGSELSDLGVGLSQLIPI 215
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSN----ASWEKELQKMSKEGEKAEIEAL 171
+D+ ++ +L+ L R + + W EL +M KAEIE L
Sbjct: 216 TKQDEAKEIMGYLQA--LAMLQRPDSLMPSKWRSELARMLHLRRKAEIEVL 264
>gi|284165559|ref|YP_003403838.1| DNA topoisomerase [Haloterrigena turkmenica DSM 5511]
gi|284015214|gb|ADB61165.1| DNA topoisomerase (ATP-hydrolyzing) [Haloterrigena turkmenica DSM
5511]
Length = 364
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + +G R + + + +L V
Sbjct: 193 ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLHDELDLPVTVFT 248
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P K++G+ P+D+ +Y +P LS DI
Sbjct: 249 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAKFIGIQPADIVEYELPT---DPLSDSDI 305
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ +K+E ++L + ++ + YLP +
Sbjct: 306 NALESELEDPRF-----QTDYWEEQIELQLDIEKKSEQQSLASHGLDFVTDTYLPERL 358
>gi|189207094|ref|XP_001939881.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975974|gb|EDU42600.1| meiosis-specific topoisomerase Spo11 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 435
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLR------LAVPNIKWLGL----------FPSDLEK 114
D +P GI IL+ Y +GS +A + +++PNI+WLG+ D E
Sbjct: 293 DLDPEGIAILSTYKYGSYRLAHEAVTPTDTPAISLPNIRWLGVKSHHMSRTPVGEDDTEP 352
Query: 115 YNIPKLCRQI-LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+P+L + L+ D +K LE +L A W +ELQKM KAE++ LD
Sbjct: 353 SAMPQLQGLMKLTARDRTKAARMLE-WNLCAEDGPEQGWRQELQKMLMFNIKAEMQILD 410
>gi|119498739|ref|XP_001266127.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
gi|119414291|gb|EAW24230.1| meiotic recombination protein spo11 [Neosartorya fischeri NRRL 181]
Length = 391
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----EKYNIPKLCRQILS 126
D +P G+ I++ Y +GS A N +L V ++WLGL SD+ + + R LS
Sbjct: 270 DSDPDGMAIMSTYKYGSMAHARDNEKLNVSKLRWLGLRTSDVIGGADSFGDEAFIR--LS 327
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D K L + A W ELQ+M KAEIE L
Sbjct: 328 LRDRKKAVAMLSNNPVWAEDGPEQEWRAELQQMLMLNLKAEIEIL 372
>gi|448455341|ref|ZP_21594521.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
gi|445813943|gb|EMA63916.1| DNA topoisomerase VI subunit A [Halorubrum lipolyticum DSM 21995]
Length = 361
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS D+
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPA---DPLSDSDV 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L++ L+ WE++++ G+K+E ++L ++ + YLP + A
Sbjct: 303 NALESELDDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERLDA 357
>gi|426192133|gb|EKV42071.1| hypothetical protein AGABI2DRAFT_212660 [Agaricus bisporus var.
bisporus H97]
Length = 389
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPN-IKWLGLFPSDLEKYNIPKLCRQI 124
++ D +PYG+ IL+VY +GS+ + N RLA + + W+G++ S+ I K
Sbjct: 213 IMALVDGDPYGLDILSVYKYGSRALKHENERLAAGDRVVWIGIWASEFSSLGIDKDKLLP 272
Query: 125 LSKDDISKLKT-FLEKGDLVA--FVRSNASWE 153
+SK D K + L++ +L+ FVR A E
Sbjct: 273 ISKGDEKKANSLLLQRKELMRLLFVRRKAEIE 304
>gi|126179533|ref|YP_001047498.1| DNA topoisomerase VI subunit A [Methanoculleus marisnigri JR1]
gi|125862327|gb|ABN57516.1| Spo11/DNA topoisomerase VI, subunit A [Methanoculleus marisnigri
JR1]
Length = 362
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+LR++ L V+ D +P+ I +GS A + LA P +++G+ PSD+
Sbjct: 230 VLRKLNDSLGLPVVVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPQAQFIGVQPSDIS 289
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVA-FVRSNASWEKELQKMSKEGEKAEIEALD 172
YN+P L++ D+S LK L + RS + + E+ K+ E + LD
Sbjct: 290 DYNLPA---DKLTEQDVSALKAELTDPRFATDYWRSQINLQLEM-KLKSEQQAFASRGLD 345
Query: 173 MYEYKYLANKYLPSKF 188
++ +YLP++
Sbjct: 346 -----FVTKEYLPTRL 356
>gi|221054093|ref|XP_002261794.1| topoisomerase [Plasmodium knowlesi strain H]
gi|193808254|emb|CAQ38957.1| topoisomerase, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG I Y G K + A N++W+G+ D+E IPK LS D
Sbjct: 218 DYDPYGFRIYLSYKEGCK--TNEDDIFACTNMRWIGMNSQDIEL--IPKEALLPLSMRDK 273
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L+ L +L + +A E+ +M K +K EIEA++ + +YL +
Sbjct: 274 NVLRNMLNGHNL----KCSAKVRTEITQMEKLSKKFEIEAMESLGTDFFIREYLIRRVMR 329
Query: 191 EDW 193
+W
Sbjct: 330 REW 332
>gi|440633702|gb|ELR03621.1| hypothetical protein GMDG_06271 [Geomyces destructans 20631-21]
Length = 429
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGL---------FPSDLEKYN-IPKL 120
D +P+GI IL+ Y GS ++A +N LAVP ++WLG+ D ++ +P +
Sbjct: 302 DYDPHGISILSTYAHGSASLAHQNDGLAVPGLRWLGVKLESAVGTQIRQDEDRGGEVPGI 361
Query: 121 CRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYE 175
L+K D ++ L + + V W +E+Q M KAEI+ L E
Sbjct: 362 L--TLTKRDRRLGRSMLMRHPAMGEV-GEEEWRREVQCMLFLNLKAEIQVLGGGE 413
>gi|116753913|ref|YP_843031.1| DNA topoisomerase VI subunit A [Methanosaeta thermophila PT]
gi|116665364|gb|ABK14391.1| Spo11/DNA topoisomerase VI, subunit A-like protein [Methanosaeta
thermophila PT]
Length = 357
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + +V+ + + + +I N F I + +G R+ ++ + +L
Sbjct: 180 EHDARMVIAVETGGMYARLIENGFDEEFDAILVHLKGQPARSTRR----FIKRLNTELGL 235
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V D +P+ I +G+ A + LA P+ ++LG+ P+D+ +YN
Sbjct: 236 PVAVFTDGDPWSYRIFASVAYGAIKSAHLSEHLATPDARFLGVQPTDIVEYN-------- 287
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
LS D ++ + +L + W+ ++Q +KAE +A ++ +YL
Sbjct: 288 LSTDKLTDRDLHALRAELTDPRFGSDYWQMQIQLQIDLKKKAEQQAFAGKGLDFVTKRYL 347
Query: 185 PSKF 188
P +
Sbjct: 348 PERL 351
>gi|296242524|ref|YP_003650011.1| DNA topoisomerase [Thermosphaera aggregans DSM 11486]
gi|296095108|gb|ADG91059.1| DNA topoisomerase (ATP-hydrolyzing) [Thermosphaera aggregans DSM
11486]
Length = 434
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 81/197 (41%), Gaps = 57/197 (28%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD-- 111
+R + +LK V D +PYG +I +V+ GS ++ + RLA P K++G+ +D
Sbjct: 238 FVRRLNEELKLPVYVLADSDPYGYYIYSVFKIGSITLSYESERLATPGAKFIGVMMTDVF 297
Query: 112 -----------LEKYNIPKLCRQILSK----------------------DDISK---LKT 135
L+K P + + L++ DI + L
Sbjct: 298 GDAPFTEVLAKLDK-GFPGMPKSSLARLRGKKAYLDEKERKNYIIKAKQKDIERAVELVG 356
Query: 136 F------LEKGDLVAFVRS------------NASWEKELQKMSKEGEKAEIEALDMYEYK 177
F +++GDL + V+ + W +EL K K EIEA+ K
Sbjct: 357 FEVADVCMDEGDLKSKVKKRKEGLTGYPWFRSPEWVRELCIFFKTLSKLEIEAMASKGLK 416
Query: 178 YLANKYLPSKFRAEDWL 194
+LA+ Y+P K +DW+
Sbjct: 417 FLADDYIPEKIETKDWI 433
>gi|429852423|gb|ELA27559.1| meiosis-specific topoisomerase spo11 [Colletotrichum
gloeosporioides Nara gc5]
Length = 348
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 60 CKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPK 119
K + + G D +PYG++I+ Y GS+ A + + VP+++WLG+ DL
Sbjct: 199 AKPELPIYGLVDFDPYGVNIMRCYSHGSRGHA-HEVGVTVPSMQWLGIKSGDL------- 250
Query: 120 LCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEK 165
+ RQ L DD E DL F R + E + KE ++
Sbjct: 251 VGRQDLEDDD-----AHAEVLDLTVFRRQQSESNFEATDVLKERDR 291
>gi|383624785|ref|ZP_09949191.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|448697205|ref|ZP_21698283.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
gi|445781584|gb|EMA32436.1| DNA topoisomerase VI subunit A [Halobiforma lacisalsi AJ5]
Length = 363
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDDEYNALIVHLKGQPARATRR----ITKRLHDELDLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y +P LS D+
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQPADIVEYELPT---DPLSDSDV 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ LE WE++++ + +K+E ++L + ++ YLP +
Sbjct: 305 NALESELEDPRF-----QTDYWEEQIELQLEIEKKSEQQSLASHGLDFVTETYLPERL 357
>gi|378728531|gb|EHY54990.1| meiotic recombination protein SPO11 [Exophiala dermatitidis
NIH/UT8656]
Length = 386
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
+ G FD +P GI IL Y++GSK +A + + +P +KW+G+ D+ + +
Sbjct: 253 QIFGLFDWDPDGIQILKCYLYGSKRLAQEHCCI-LPEMKWIGIRAHDIHRLDGATQESLP 311
Query: 125 LSKDDISKLKTFL-------EKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
LS D + ++ L E G+++ ++ E+Q++ KAEI+ LD
Sbjct: 312 LSMRDRALARSMLASEEWRDELGEILPGLQEATV---EIQRLLMLNRKAEIQILDQ 364
>gi|367024897|ref|XP_003661733.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
gi|347009001|gb|AEO56488.1| hypothetical protein MYCTH_45107 [Myceliophthora thermophila ATCC
42464]
Length = 443
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 17/125 (13%)
Query: 50 KIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFP 109
+ + LL +R +L S+ D +P+GI I+ Y GS+ + AVP ++WLGL
Sbjct: 261 RFLFLLHSVRPEL--SLFALVDFDPHGIAIMRTYKHGSQRLEHEQ-NAAVPCLQWLGLHS 317
Query: 110 SDL-----EKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKM--SKE 162
D+ KY P C I ++D S+ E + ++ S++ EK +++ SKE
Sbjct: 318 GDVIMNLPAKY--PSACDSIQNQD--SQQPASQESAE---YLISDSRREKPMKRARHSKE 370
Query: 163 GEKAE 167
E +E
Sbjct: 371 QESSE 375
>gi|448469585|ref|ZP_21600267.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
gi|445808922|gb|EMA58973.1| DNA topoisomerase VI subunit A [Halorubrum kocurii JCM 14978]
Length = 361
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P D+ +Y++P LS D+
Sbjct: 246 DGDPWSYRIYGSVAYGSIKSAHLSKYLATPEAQFVGIQPEDIVEYDLPA---DPLSDSDV 302
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L+ WE++++ G+K+E ++L ++ + YLP +
Sbjct: 303 NALESELDDPRF-----QTDYWEEQIELQLDIGKKSEQQSLASRGLDFVTDTYLPERL 355
>gi|355570752|ref|ZP_09042022.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
gi|354826034|gb|EHF10250.1| Type 2 DNA topoisomerase 6 subunit A [Methanolinea tarda NOBI-1]
Length = 351
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + LA P +++G+ PSD+ YN+P L++ DI
Sbjct: 233 DGDPWSYRIYASVAYGAIKSAHMSELLATPKAQFIGVQPSDIRDYNLPA---DALTEKDI 289
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L ++ W++++Q K+E +A ++ +YLP +
Sbjct: 290 AALQSELTDPRF-----GSSYWKEQIQLQLALNLKSEQQAFAARGLDFVTREYLPRRL 342
>gi|405124141|gb|AFR98903.1| endodeoxyribonuclease [Cryptococcus neoformans var. grubii H99]
Length = 511
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVP---NIKWLGLFPSDLEKYNIPKLCRQILSK 127
D +P+G+ IL+ YM+GSK A +P ++WLGL SD +I L +
Sbjct: 372 DADPHGLKILSTYMYGSKANAYSTDYEDLPLRDRVQWLGLRASDWSYLHINYDDLIPLEQ 431
Query: 128 DDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
DI + L ++ W++EL M KAEIE
Sbjct: 432 SDIQMAMSMLRDHQVLPV-----DWKRELSHMLHLHRKAEIE 468
>gi|347832663|emb|CCD48360.1| hypothetical protein [Botryotinia fuckeliana]
Length = 496
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P GI I++ Y GS +A N L+VP + WLGL D+ + L++ D
Sbjct: 381 DFDPDGIGIMSTYKHGSVALAHENEGLSVPFMHWLGLRSKDMMQGGKENEGLLKLTERD- 439
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
+L + + DL W +E+Q M +KAEI+
Sbjct: 440 RRLAVKMLQRDLCQEYGDEHEWRREIQVMLMLNKKAEIQ 478
>gi|452840859|gb|EME42796.1| hypothetical protein DOTSEDRAFT_131971 [Dothistroma septosporum
NZE10]
Length = 342
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
V G D +P G+ IL+ Y GSK++A + +P ++WLGL +L Q L
Sbjct: 218 VYGLADFDPDGLSILSTYRRGSKSLAHESEAHCIPQLQWLGLRSENLYMDQANTHASQGL 277
Query: 126 SKDDISKLKTFLEKGDLVAFVRSN-----ASWEKELQKMSKEGEKAEIEALDMYEY 176
KL T K + VR++ W+ EL+ M KAE++ LD +
Sbjct: 278 -----LKLTTRDRKKAVNMLVRNDDWEVPEEWKAELRTMLMLNTKAELQLLDATRH 328
>gi|34395897|sp|Q8TQF8.2|TOP6A_METAC RecName: Full=Type II DNA topoisomerase VI subunit A
Length = 373
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P ++LGL PSD+ +Y +L L++ DI
Sbjct: 258 DGDPWSYRIYASVAYGAIKSAHLSEFMATPAARFLGLQPSDIVEY---ELSTDKLTEQDI 314
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
S L++ L + W++++Q G+KAE +A ++ YLP++ +
Sbjct: 315 SALRSELSDPRF-----ESEYWKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLK 368
>gi|452210942|ref|YP_007491056.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
gi|452100844|gb|AGF97784.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Tuc01]
Length = 369
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P K+LGL PSD+ +Y +L L++ D+
Sbjct: 254 DGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEY---ELSTDKLTEQDV 310
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
S L++ L + W++++Q G+KAE +A ++ YLP++ +
Sbjct: 311 SALRSELSDPRF-----ESDYWKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLK 364
>gi|367037763|ref|XP_003649262.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
gi|346996523|gb|AEO62926.1| hypothetical protein THITE_2141149 [Thielavia terrestris NRRL 8126]
Length = 418
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 13 CLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSFDC 72
L+ S I I + + +VI +G + T + + L IR L SVL FD
Sbjct: 206 VLLPSVASIRQINFRAARWLLVIEKEAKGFPDLTTR-RFLCALHSIRPDLGISVLVDFD- 263
Query: 73 NPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
P G+ I+ Y +GSK + G +A P ++WLG+ D+
Sbjct: 264 -PDGVAIMRTYRYGSKRL-GHEENVATPQLRWLGILSDDI 301
>gi|20090444|ref|NP_616519.1| DNA topoisomerase VI subunit A [Methanosarcina acetivorans C2A]
gi|19915459|gb|AAM04999.1| DNA topoisomerase subunit A [Methanosarcina acetivorans C2A]
Length = 393
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P ++LGL PSD+ +Y +L L++ DI
Sbjct: 278 DGDPWSYRIYASVAYGAIKSAHLSEFMATPAARFLGLQPSDIVEY---ELSTDKLTEQDI 334
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
S L++ L + W++++Q G+KAE +A ++ YLP++ +
Sbjct: 335 SALRSELSDPRF-----ESEYWKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLK 388
>gi|21228520|ref|NP_634442.1| DNA topoisomerase VI subunit A [Methanosarcina mazei Go1]
gi|34395891|sp|Q8PUB7.1|TOP6A_METMA RecName: Full=Type II DNA topoisomerase VI subunit A
gi|152149434|pdb|2Q2E|A Chain A, Crystal Structure Of The Topoisomerase Vi Holoenzyme From
Methanosarcina Mazei
gi|20907006|gb|AAM32114.1| Type II DNA topoisomerase VI, subunit A [Methanosarcina mazei Go1]
Length = 369
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P K+LGL PSD+ +Y +L L++ D+
Sbjct: 254 DGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEY---ELSTDKLTEQDV 310
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
S L++ L + W++++Q G+KAE +A ++ YLP++ +
Sbjct: 311 SALRSELSDPRF-----ESDYWKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLK 364
>gi|242208773|ref|XP_002470236.1| predicted protein [Postia placenta Mad-698-R]
gi|220730686|gb|EED84539.1| predicted protein [Postia placenta Mad-698-R]
Length = 128
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 90 MAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSN 149
M N RL IKWLG++ ++L LSKD++ + EK L R N
Sbjct: 1 MQHENERLVARKIKWLGIYTTELAGIG--------LSKDELIPINKHDEKKALTMLRRPN 52
Query: 150 --ASWEKELQKMSKEGEKAEIEALDM 173
W KELQ M KAEIE L +
Sbjct: 53 LPKRWRKELQHMLHNRRKAEIEVLSL 78
>gi|397779966|ref|YP_006544439.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
gi|396938468|emb|CCJ35723.1| DNA topoisomerase VI subunit A [Methanoculleus bourgensis MS2]
Length = 419
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+LR + L V+ D +P+ I +GS A + LA P +++G+ P+D+
Sbjct: 287 VLRRLNDSLDLPVVVFTDGDPWSYRIYASVAYGSIKSAHMSELLATPQAQFIGVQPTDIS 346
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVA-FVRSNASWEKELQKMSKEGEKAEIEALD 172
YN+P L++ DI+ LK L + RS + + E++ K+E +A
Sbjct: 347 DYNLPA---DHLTEQDINALKAELTDPRFATEYWRSQINLQLEMKL------KSEQQAFA 397
Query: 173 MYEYKYLANKYLPSKF 188
++ +YLP++
Sbjct: 398 SRGLDFVTKEYLPTRL 413
>gi|146324038|ref|XP_747937.2| meiosis-specific topoisomerase Spo11 [Aspergillus fumigatus Af293]
gi|129556354|gb|EAL85899.2| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus Af293]
Length = 388
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----EKYNIPKLCRQILS 126
D +P G+ I++ Y +GS A N +L V + WLGL SD+ + + R LS
Sbjct: 267 DSDPDGMAIMSTYKYGSMAHAHDNEKLNVSKLCWLGLRTSDVIGSADSFGDEAFIR--LS 324
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D K L + A W ELQ+M KAEIE L
Sbjct: 325 LRDRKKAVAMLSNNPVWAEDGPEQEWRAELQQMLMLNLKAEIEIL 369
>gi|134078477|emb|CAL00340.1| unnamed protein product [Aspergillus niger]
Length = 388
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKD 128
D +P G+ I+ Y +GS A N L VP + WLGL +++ P + L+K
Sbjct: 260 DGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLAEVVAGADPLGDGTLLHLTKR 319
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL-DM 173
D K L K + W ELQ+M KAE+E L DM
Sbjct: 320 DRKKAIDMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEILYDM 365
>gi|317032060|ref|XP_001393922.2| meiotic recombination protein spo11 [Aspergillus niger CBS 513.88]
Length = 395
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKD 128
D +P G+ I+ Y +GS A N L VP + WLGL +++ P + L+K
Sbjct: 270 DGDPDGMAIMATYKYGSVAFAHENRNLNVPGLHWLGLRLAEVVAGADPLGDGTLLHLTKR 329
Query: 129 DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL-DM 173
D K L K + W ELQ+M KAE+E L DM
Sbjct: 330 DRKKAIDMLSKNPVWEADGPEPEWRVELQRMLMLNVKAEMEILYDM 375
>gi|330936289|ref|XP_003305327.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
gi|311317731|gb|EFQ86610.1| hypothetical protein PTT_18136 [Pyrenophora teres f. teres 0-1]
Length = 418
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLR------LAVPNIKWLGL----------FPSDLEK 114
D +P GI IL+ Y +GS +A + ++PNI+WLG+ D E
Sbjct: 298 DLDPDGIAILSTYKYGSYRLAHEAVTPTDTPATSLPNIRWLGVKSHHMSRTPVGEDDTEP 357
Query: 115 YNIPKLCRQI-LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+P+L + L+ D +K LE +L W +ELQKM KAE++ LD
Sbjct: 358 STMPQLQGLMKLTARDRTKAAKMLE-WNLCTEDGPEQDWRQELQKMLMFNIKAEMQILD 415
>gi|396498159|ref|XP_003845151.1| hypothetical protein LEMA_P004590.1 [Leptosphaeria maculans JN3]
gi|312221732|emb|CBY01672.1| hypothetical protein LEMA_P004590.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR------LAVPNIKWLG----------LFPSDLE 113
D +P GI I++ Y +GS +A ++ L++PNI+WLG + SD
Sbjct: 5 MDLDPDGIAIMSTYKYGSYRLAHEDVTTNDRPGLSLPNIRWLGVKAHQISRTPVGESDTG 64
Query: 114 KYNIPKLCRQI-LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
IP+L + L+ D K LE DL A W LQ M KAE++ LD
Sbjct: 65 TGAIPRLQGVMKLTWRDRGKAMRMLEW-DLCADDGPEQEWRGALQSMLMLNGKAEMQILD 123
>gi|443920159|gb|ELU40140.1| topoisomerase acting in meiosis [Rhizoctonia solani AG-1 IA]
Length = 472
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----EKYNIPKLCRQILS 126
D +P+G+ IL+VY FGSK + + +A ++W+G+ + + IP L +
Sbjct: 313 DADPHGMDILSVYKFGSKTLVHED--VAAERVQWIGVKRLTVLTWRNRLGIPSLEMLKTT 370
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASW----EKELQKMSKEGEKAEIEAL 171
DI K + L L + W +EL++M + G KAEIE +
Sbjct: 371 SADIRKAENMLRSQTL------PSEWVYVPREELEQMLQTGTKAEIEVI 413
>gi|218884529|ref|YP_002428911.1| DNA topoisomerase VI subunit A [Desulfurococcus kamchatkensis
1221n]
gi|218766145|gb|ACL11544.1| Type 2 DNA topoisomerase VI subunit A [Desulfurococcus
kamchatkensis 1221n]
Length = 433
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 55/179 (30%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL-----------EKYNIPK 119
D +PYG +I +V+ GS ++ + RLA P K++G+ +D+ EK + +
Sbjct: 254 DSDPYGFYIYSVFKIGSITLSYESERLATPRAKFIGVMMTDVFGDDIFREMLREKDSRSR 313
Query: 120 LCRQILSKDDISKLKTFLEKG------------------DLVAFVRSNA----------- 150
L + D ++K K +L + +LV + ++
Sbjct: 314 LNSIVKGLDKLAKKKPYLSEAERRNYIIKAKQRDLERAVELVGYDIADTCLDNTELKSKL 373
Query: 151 ---------------SWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
W +EL K K EIEA+ K+LA+ Y+P K DW+
Sbjct: 374 KKKEGLTGYPWFQTPEWIRELCIFFKTLSKLEIEAMASKGLKFLADHYIPEKISGGDWI 432
>gi|432330700|ref|YP_007248843.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
gi|432137409|gb|AGB02336.1| DNA topoisomerase VI, subunit A [Methanoregula formicicum SMSP]
Length = 364
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + LA P ++LGL PSD+ YN+P L+ D+
Sbjct: 247 DGDPWSYRIYGSVAYGAIKSAHMSELLATPKAQFLGLRPSDIRDYNLPS---DKLTDKDV 303
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
L++ L + W+KE+ + K+E +A ++ YLP++
Sbjct: 304 EALRSELTDPRF-----ATDYWKKEINLQLEMNLKSEQQAFAARGLDFVTKTYLPARL 356
>gi|389624895|ref|XP_003710101.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
gi|351649630|gb|EHA57489.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae 70-15]
Length = 466
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 51 IVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPS 110
+V LRE R ++ + D +P GI IL Y + S + + AV NI+W+G+ S
Sbjct: 287 LVYCLREARPRIP--IYSLVDYDPDGIRILCTYKYSSSALE-HERQSAVSNIQWIGIRLS 343
Query: 111 DLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQ 157
D++++++ + C +L +D S + T + G V VR+ + Q
Sbjct: 344 DIKEHHL-RPCNSVL-QDAGSPVNTEIHSGLDVGHVRNRPDFAMSRQ 388
>gi|238503299|ref|XP_002382883.1| meiosis-specific topoisomerase Spo11, putative [Aspergillus flavus
NRRL3357]
gi|220691693|gb|EED48041.1| meiosis-specific topoisomerase Spo11, putative [Aspergillus flavus
NRRL3357]
Length = 120
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 77 IHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKDDISKLK 134
+ I+++Y +GS +N RL +P + WLGL SD+ R + L+ D +K+
Sbjct: 1 MAIMSIYKYGSMAHTNQNGRLNIPCLWWLGLRTSDVVSGAPSNDDRALNRLTVRDRTKIV 60
Query: 135 TFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
T L + A W ELQ+M KAEIE L
Sbjct: 61 TMLSNNPVWAAEGPELEWRAELQQMLMLNLKAEIEIL 97
>gi|354611442|ref|ZP_09029398.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
gi|353196262|gb|EHB61764.1| Type 2 DNA topoisomerase 6 subunit A [Halobacterium sp. DL1]
Length = 364
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 77/184 (41%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
+S+ +L + + +R ++ N + + + G R L + + ++
Sbjct: 187 DSDADFILAVETGGMRDRLVENGFDGEYNCLVVHLGGQPARATRR----LTKRLHDEVGL 242
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V D +P+ I +GS A + LA P +++G+ P D+ Y +P
Sbjct: 243 PVTVFTDSDPWSYRIFGSVAYGSIKSAHLSEYLATPEAQFIGIRPEDIVDYELPT---DP 299
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
LS DI+ L++ LE + W ++++ +KAE +AL ++ + YL
Sbjct: 300 LSDSDINALESELEDPRFQSDF-----WTEQIELQLDIDKKAEQQALASRGLDFVTDTYL 354
Query: 185 PSKF 188
P +
Sbjct: 355 PERL 358
>gi|73670271|ref|YP_306286.1| DNA topoisomerase VI subunit A [Methanosarcina barkeri str. Fusaro]
gi|121731963|sp|Q468I6.1|TOP6A_METBF RecName: Full=Type 2 DNA topoisomerase 6 subunit A; AltName:
Full=Type II DNA topoisomerase VI subunit A
gi|72397433|gb|AAZ71706.1| type II DNA topoisomerase VI, subunit A [Methanosarcina barkeri
str. Fusaro]
Length = 369
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P K+LGL PSD+ +Y +L L++ DI
Sbjct: 254 DGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFLGLQPSDIVEY---ELSTDKLTEQDI 310
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ L++ L + W++++Q G+KAE +A ++ YLP++ +
Sbjct: 311 NALRSELSDPRF-----ESDYWKEQIQLQLDIGKKAEQQAFAGKGLNFVTEVYLPNRLK 364
>gi|390939025|ref|YP_006402763.1| DNA topoisomerase [Desulfurococcus fermentans DSM 16532]
gi|390192132|gb|AFL67188.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus fermentans DSM
16532]
Length = 433
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 55/179 (30%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL-----------EKYNIPK 119
D +PYG +I +V+ GS ++ + RLA P K++G+ +D+ +K + +
Sbjct: 254 DSDPYGFYIYSVFKIGSITLSYESERLATPRAKFIGVMMTDVFGDDIFREILRDKDSRSR 313
Query: 120 LCRQILSKDDISKLKTFLEKG------------------DLVAFVRSNA----------- 150
L + D ++K K +L + +LV + ++A
Sbjct: 314 LNSIVKGLDKLAKKKPYLSEAERRNYIIKAKQRDLERAVELVGYDIADACLNNTELKSKL 373
Query: 151 ---------------SWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
W +EL + K EIEA+ K+LA+ Y+P K + DW+
Sbjct: 374 KKKEGLTGYPWFQTPEWIRELCIFFRTLSKLEIEAMASKGLKFLADHYIPEKISSGDWI 432
>gi|440463984|gb|ELQ33495.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae Y34]
gi|440484008|gb|ELQ64208.1| meiosis-specific topoisomerase Spo11 [Magnaporthe oryzae P131]
Length = 406
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 51 IVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPS 110
+V LRE R ++ + D +P GI IL Y + S + + AV NI+W+G+ S
Sbjct: 227 LVYCLREARPRIP--IYSLVDYDPDGIRILCTYKYSSSALE-HERQSAVSNIQWIGIRLS 283
Query: 111 DLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQ 157
D++++++ + C +L +D S + T + G V VR+ + Q
Sbjct: 284 DIKEHHL-RPCNSVL-QDAGSPVNTEIHSGLDVGHVRNRPDFAMSRQ 328
>gi|378755995|gb|EHY66020.1| hypothetical protein NERG_00716 [Nematocida sp. 1 ERTm2]
Length = 313
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+ G FDC+P+G+ I VY +GSK RN L VP+++ +G + Y IP +
Sbjct: 205 IFGLFDCDPHGLSIYAVYKYGSK----RNPHLKVPSMERIG-----IHLYEIPVTPETMY 255
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
D ++ L+ +R+ + ++ M + KA IE +
Sbjct: 256 ITDK--------KQISLIRNLRNLEELQNDINIMEETRRKASIEDI 293
>gi|429190415|ref|YP_007176093.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|448326327|ref|ZP_21515693.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
gi|429134633|gb|AFZ71644.1| DNA topoisomerase VI, subunit A [Natronobacterium gregoryi SP2]
gi|445612542|gb|ELY66263.1| DNA topoisomerase VI subunit A [Natronobacterium gregoryi SP2]
Length = 363
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 82/184 (44%), Gaps = 14/184 (7%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E++F +L + + +R ++ N + + + +G R + + +R +L
Sbjct: 188 EADF--ILAVETGGMRDRLVENGFDEEYNALIVHLKGQPARATRR----ITKRLRDELSL 241
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V D +P+ I +GS A + LA P +++G+ P+D+ +Y++P
Sbjct: 242 PVTVFTDGDPWSYRIYGSVAYGSIKSAHLSEYLATPQAQFIGVQPADIVEYDLPT---DP 298
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
LS D + L++ L WE++++ + +K+E ++L + ++ YL
Sbjct: 299 LSDSDKNALESELSDPRF-----QTDYWEEQIELQLEIEKKSEQQSLASHGLDFVTETYL 353
Query: 185 PSKF 188
P +
Sbjct: 354 PERL 357
>gi|156082001|ref|XP_001608493.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801064|gb|EDL42469.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 334
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYG I Y G K + +++W+G+ D+ IPK LS+ D
Sbjct: 218 DYDPYGFRIYLSYKEGCK--TNEDAIFPCADMRWVGMNSQDMSL--IPKEALLALSQRDK 273
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ L+ L L + +A +E+ +M K K EIEA++ + +YL +
Sbjct: 274 NVLRNMLSGDSL----KCSAKVRREITQMEKLSRKFEIEAMESLGMDFFIREYLIRRVMR 329
Query: 191 EDW 193
+W
Sbjct: 330 REW 332
>gi|212535386|ref|XP_002147849.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
gi|210070248|gb|EEA24338.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
marneffei ATCC 18224]
Length = 397
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 25/148 (16%)
Query: 47 CENKIVILLREIRCKLKKSVLGSF-----------------DCNPYGIHILTVYMFGSKN 89
C + V L+ +I CK S L + DC+ G+ I++ Y +GS
Sbjct: 232 CTREFVHLISDISCKRDSSSLQNLHIVQPPTPPRFFALVDGDCD--GMAIMSTYKYGSMA 289
Query: 90 MAGRNLRLAVPNIKWLGLFPSD-LEKYNIPKLCRQ-----ILSKDDISKLKTFLEKGDLV 143
A + L P ++WLG D + K+N ++ + LS D+ K+++ L K +
Sbjct: 290 HAHASASLNAPKLQWLGTRLIDVIVKHNGLEVEDEDWVMISLSYRDVKKIRSMLLKNPVF 349
Query: 144 AFVRSNASWEKELQKMSKEGEKAEIEAL 171
A W ELQ M K E E L
Sbjct: 350 AQDGPEIEWRAELQTMMMLNTKIETEVL 377
>gi|254166844|ref|ZP_04873698.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289596418|ref|YP_003483114.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
gi|197624454|gb|EDY37015.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|289534205|gb|ADD08552.1| DNA topoisomerase (ATP-hydrolyzing) [Aciduliprofundum boonei T469]
Length = 362
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL+ + +L V+ D +P+ I +G+ A + LA P +++G+ SD+
Sbjct: 229 LLKRMNEELGLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDIL 288
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++P L+ DI+ L++ L+ W +E++ M K +KAE ++L
Sbjct: 289 NYDLPT---DKLNDRDIAALQSELKDPRF-----QTPFWTEEIKLMLKIKKKAEQQSLAK 340
Query: 174 YEYKYLANKYLPSKF 188
Y Y+ + YLP K
Sbjct: 341 YGLDYVTDTYLPEKL 355
>gi|145967222|gb|ABP99003.1| meiotic transesterase [Acanthamoeba castellanii]
Length = 69
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL+ + +L+ V+G FD NP G+ + Y +GS +G L +IKWLGL DLE
Sbjct: 10 LLKRLHEELRLPVVGLFDWNPGGMGVYITYRYGSVK-SGLESHLHTVDIKWLGLCWDDLE 68
Query: 114 K 114
+
Sbjct: 69 R 69
>gi|432328235|ref|YP_007246379.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
gi|432134944|gb|AGB04213.1| DNA topoisomerase VI, subunit A [Aciduliprofundum sp. MAR08-339]
Length = 362
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 8/135 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL+ + +L V+ D +P+ I +G+ A + LA P +++G+ SD+
Sbjct: 229 LLKRMNEELGLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDIL 288
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++P L+ DI+ L++ L+ W +E++ M K +KAE ++L
Sbjct: 289 NYDLPT---DKLNDRDIAALESELKDPRF-----QTPFWTEEIKLMLKIKKKAEQQSLAK 340
Query: 174 YEYKYLANKYLPSKF 188
Y Y+ + YLP K
Sbjct: 341 YGLDYVTDTYLPEKL 355
>gi|387594072|gb|EIJ89096.1| hypothetical protein NEQG_00915 [Nematocida parisii ERTm3]
Length = 305
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ G FDC+P+G+ I +VY +GSK + L +PN++ +G+ D+
Sbjct: 199 IYGLFDCDPHGLSIYSVYKYGSK----KRPHLKIPNMQRIGVHLQDI 241
>gi|387595727|gb|EIJ93350.1| hypothetical protein NEPG_01692 [Nematocida parisii ERTm1]
Length = 305
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+ G FDC+P+G+ I +VY +GSK + L +PN++ +G+ D+
Sbjct: 199 IYGLFDCDPHGLSIYSVYKYGSK----KRPHLKIPNMQRIGVHLQDI 241
>gi|254167482|ref|ZP_04874334.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
gi|197623745|gb|EDY36308.1| Type IIB DNA topoisomerase family [Aciduliprofundum boonei T469]
Length = 362
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
LL+ + +L V+ D +P+ I +G+ A + LA P +++G+ SD+
Sbjct: 229 LLKRMNEELGLPVVIFTDGDPWSFRIFASIAYGAIKTAHISEYLATPTAEFVGITASDIL 288
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
Y++P L+ DI+ L++ L W +E++ M K +KAE ++L
Sbjct: 289 NYDLPT---DKLNDRDIAALQSELRDPRF-----QTPFWTEEIKLMLKIKKKAEQQSLAK 340
Query: 174 YEYKYLANKYLPSKF 188
Y Y+ + YLP K
Sbjct: 341 YGLDYVTDTYLPEKL 355
>gi|321264504|ref|XP_003196969.1| endodeoxyribonuclease [Cryptococcus gattii WM276]
gi|317463447|gb|ADV25182.1| Endodeoxyribonuclease, putative [Cryptococcus gattii WM276]
Length = 567
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 22/109 (20%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVP---NIKWLGLFPSDLEKYNIPKLCRQILSK 127
D +P+G+ IL+ YM+GSK A + +P ++WLGL SD I +
Sbjct: 427 DADPHGLKILSTYMYGSKANAYSSDYEDLPLRDRVQWLGLRASDWSDLGI--------NY 478
Query: 128 DDISKLKTFLEKGDL---VAFVRSNAS----WEKELQKMSKEGEKAEIE 169
DD+ LE+ D+ ++ +R + + W++EL M KAEIE
Sbjct: 479 DDL----IPLEQSDIQLAMSMLRDHQTLPDEWKRELSHMLHLRRKAEIE 523
>gi|58270330|ref|XP_572321.1| endodeoxyribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117758|ref|XP_772513.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255127|gb|EAL17866.1| hypothetical protein CNBL1280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228579|gb|AAW45014.1| endodeoxyribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 559
Score = 42.7 bits (99), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVP---NIKWLGLFPSDLEKYNIPKLCRQILSK 127
D +P+G+ IL+ YM+GSK A +P ++WLGL S +I L +
Sbjct: 420 DADPHGLKILSTYMYGSKANAYSTDYGDLPLGDRVQWLGLRASHWSDLHISYDHLIPLEQ 479
Query: 128 DDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
DI + L + W++EL M KAEIE
Sbjct: 480 SDIQMAMSMLRDHQTLPV-----EWKRELSHMLHLHRKAEIE 516
>gi|146174859|ref|XP_001019494.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila]
gi|146144754|gb|EAR99249.2| Type IIB DNA topoisomerase family protein [Tetrahymena thermophila
SB210]
Length = 650
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI-- 124
LG FD P+G+ IL Y FGS+N + L PNI +LGL D+ +N ++
Sbjct: 392 LGDFD--PFGLDILFNYTFGSENSVYQQDNL--PNIHFLGLSSFDILDFNQQSDEKKFNV 447
Query: 125 ---LSKDDISKLKTFLEK 139
LSK DI KL + K
Sbjct: 448 ENNLSKQDICKLDALIAK 465
>gi|255076643|ref|XP_002501996.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
gi|226517261|gb|ACO63254.1| type II DNA topoisomerase VI subunit A 1 [Micromonas sp. RCC299]
Length = 430
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAG--RNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
LG D NP G+ IL Y G + + + R A+ +KWLG+ +DL R
Sbjct: 289 LGLVDWNPSGVLILGTYRAGGRTSSAVLESSRYAL-ELKWLGVRSADLAT----NPARIP 343
Query: 125 LSKDDISKLKTFLE------KGDLVAFVRSNASWEK-------ELQKMSKEGEKAEIEAL 171
L+ D +K +T L GD ++AS E+ EL M G KAEIE+L
Sbjct: 344 LTDLDRAKARTMLRADGARLDGDTAGDESTDASTERLQSARARELTAMCATGFKAEIESL 403
>gi|451999964|gb|EMD92426.1| hypothetical protein COCHEDRAFT_1193911 [Cochliobolus
heterostrophus C5]
Length = 730
Score = 42.4 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRL------AVPNIKWLGLFPSDL------EKYNIP 118
D +P GI IL+ Y +GS + ++ L +PN++WLG+ ++ E
Sbjct: 61 DLDPDGIAILSTYKYGSYRLMHEDVALMNTSALCLPNVQWLGVKSDNMSPSLVGEDGTER 120
Query: 119 KLCRQI-----LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
K+ Q+ L+ D K LE DL A W +ELQ M KAE++ LD
Sbjct: 121 KMIHQLQGLMRLTTRDRIKATRMLE-WDLCAEDGFERGWRRELQWMLMLNVKAEMQVLD 178
>gi|452981949|gb|EME81708.1| hypothetical protein MYCFIDRAFT_138655, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 361
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
V G D +P GI IL VY GSK +A + A P ++WLGL ++L
Sbjct: 234 VYGLADFDPDGIAILCVYKHGSKALAHESRDHAAPEMEWLGLRSTNL 280
>gi|256073778|ref|XP_002573205.1| meiotic recombination protein spo11 [Schistosoma mansoni]
gi|353231619|emb|CCD78037.1| putative meiotic recombination protein spo11 [Schistosoma mansoni]
Length = 158
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 54 LLREIRCKLKK-SVLGSFDCNPYGIHILTVYMFGSKNMAGRNL---RLAVPNIKWLGLFP 109
L +I CK ++G FD +P+G+++ Y +G+ N +N +++PN++ GL P
Sbjct: 94 FLAQINCKHPNIPIIGLFDADPHGLNVFCTYKYGTTNPMMQNEDGNPISIPNLQLCGLLP 153
Query: 110 SDL 112
+++
Sbjct: 154 TEI 156
>gi|385805793|ref|YP_005842191.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
gi|383795656|gb|AFH42739.1| DNA topoisomerase VI subunit A [Fervidicoccus fontis Kam940]
Length = 453
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+R + +LK V D +PYG +I +V+ GS ++ + RLA P ++LG+ SD+
Sbjct: 239 FVRRLNEELKLPVYILADSDPYGFYIYSVFKIGSITLSYESERLATPKARFLGVTMSDVF 298
Query: 114 KYNIPKLCRQILSKDDI 130
++P L LS ++I
Sbjct: 299 GDDVP-LNEVYLSPEEI 314
>gi|390601971|gb|EIN11364.1| DNA topoisomerase IV alpha subunit, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 199
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEK 114
+L D +P+GI IL Y GS +M LA ++WLG++ SD+ K
Sbjct: 151 ILALVDWDPHGIDILLTYKLGSISMLHEKDTLAASRVQWLGIYSSDVLK 199
>gi|126465878|ref|YP_001040987.1| DNA topoisomerase VI subunit A [Staphylothermus marinus F1]
gi|126014701|gb|ABN70079.1| Spo11/DNA topoisomerase VI, subunit A [Staphylothermus marinus F1]
Length = 434
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 60/198 (30%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLF----- 108
+R + +LK V D +PYG +I +V+ GS ++ + RLA P+ K++G+
Sbjct: 239 FVRRLNEELKLPVYILADADPYGWYIYSVFKIGSITLSYESERLATPSAKFIGVTMTDVF 298
Query: 109 ----------------------------------------------PSDLEK------YN 116
P D+E+ Y+
Sbjct: 299 GDEIIREKIKDLKSIKTISSSTLRKLPRKKPYLTEQERRNYIIKAKPKDIERAVELIGYD 358
Query: 117 IPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEY 176
+ + C + +K+ SK++ E + R+ W +EL K K EIEA+
Sbjct: 359 VAEACLE--NKELKSKIRRKKEGLAGYPWFRT-PEWIRELCIFFKTLSKLEIEAMASKGL 415
Query: 177 KYLANKYLPSKFRAEDWL 194
K+LA+KY+P K DW+
Sbjct: 416 KFLADKYIPEKINVGDWI 433
>gi|451854047|gb|EMD67340.1| hypothetical protein COCSADRAFT_136216 [Cochliobolus sativus
ND90Pr]
Length = 455
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRL------AVPNIKWLGLFPSDL------EKYNIP 118
D +P GI IL+ Y +GS + ++ L ++PN++WLG+ ++ E
Sbjct: 300 DLDPDGIAILSTYKYGSYRLMHEDVALMNTPALSLPNVRWLGVKSDNMSLSLVGEHGTKR 359
Query: 119 KLCRQI-----LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
K+ Q+ L+ D +K LE DL W +ELQ M KAE++ LD
Sbjct: 360 KMIHQLQGLMRLTMRDRTKATRMLEW-DLCGEDGLERDWRRELQWMLMLNVKAEMQVLD 417
>gi|339251714|ref|XP_003372879.1| carboxypeptidase B [Trichinella spiralis]
gi|316968726|gb|EFV52961.1| carboxypeptidase B [Trichinella spiralis]
Length = 827
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 53 ILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMA-GRNLRLAVPNIKWLGLFPSD 111
+ LR++ LK + D +P GI I Y +G N++ + + +P +KW+G++PS+
Sbjct: 613 LFLRKLYDYLKLPMFALMDADPCGIEIFLTYKYGPMNVSYESGVNVLLPWMKWIGVYPSE 672
Query: 112 LEKYNI 117
+ N+
Sbjct: 673 ISSLNL 678
>gi|82596810|ref|XP_726415.1| topoisomerase VIA [Plasmodium yoelii yoelii 17XNL]
gi|23481817|gb|EAA17980.1| putative topoisomerase VIA [Plasmodium yoelii yoelii]
Length = 205
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +PYGI I Y G KN +N A ++KW+G+ +D+ + PK LS +
Sbjct: 89 DYDPYGIRIYLSYKEGCKN--NQNFVYACKDMKWVGMCFNDINFF--PKESLLSLSMKEK 144
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
++ L L ++ E+ +M+++ K EIEA + ++ YL K
Sbjct: 145 HVIENLLNDKKLYY----SSKLRTEISEMNEKNIKFEIEAFEYVGMEFFVKNYLIKKILR 200
Query: 191 EDWL 194
+ WL
Sbjct: 201 KQWL 204
>gi|320101390|ref|YP_004176982.1| DNA topoisomerase [Desulfurococcus mucosus DSM 2162]
gi|319753742|gb|ADV65500.1| DNA topoisomerase (ATP-hydrolyzing) [Desulfurococcus mucosus DSM
2162]
Length = 434
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 65/184 (35%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDD- 129
D +PYG +I +V+ GS ++ + RLA P K++G+ +D+ ++ R++L D
Sbjct: 255 DSDPYGFYIYSVFKIGSITLSYESERLATPRAKFIGVMMTDVFGDDV---FREMLKDKDS 311
Query: 130 -------------ISKLKTFLEKGDLVAFV-----------------------RSNASWE 153
++K K +L + + ++ NA ++
Sbjct: 312 KKELGSIARGLEKLAKKKPYLTEAERRNYIIKAKQRDLERAVELIGYNVADVCLDNAEYK 371
Query: 154 KELQKMSKEG-----------------------EKAEIEALDMYEYKYLANKYLPSKFRA 190
+L+K KEG K EIEA+ K+LA+ Y+P K
Sbjct: 372 NKLKK--KEGLTGYPWFQTPEWVRELCVFFKTLSKLEIEAMASKGLKFLADHYIPEKIST 429
Query: 191 EDWL 194
DW+
Sbjct: 430 GDWI 433
>gi|298675296|ref|YP_003727046.1| DNA topoisomerase [Methanohalobium evestigatum Z-7303]
gi|298288284|gb|ADI74250.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalobium evestigatum
Z-7303]
Length = 370
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
++NF ++ + + + +I N + + + +G R+ +++ + +L
Sbjct: 195 DANF--IIAIETGGMYARLIENGFDEKYNAVLVHLKGQPARSTRR----IIKRMNEELGL 248
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
VL D +P+ I +G+ A + +A PN K+LGL P+D+ +Y +L
Sbjct: 249 PVLVFTDGDPWSYRIYASIAYGAIKSAHLSEFMATPNAKFLGLQPTDIVEY---ELSTDK 305
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L++ D+ L++ L W+++++ +KAE +A ++ YL
Sbjct: 306 LTERDVEALRSELSDPRF-----ETDYWKEQIELQLDIKKKAEQQAFAGKGLDFVTETYL 360
Query: 185 PSKFR 189
P + +
Sbjct: 361 PDRLK 365
>gi|449328985|gb|AGE95260.1| meiotic recombination protein rec12 [Encephalitozoon cuniculi]
Length = 303
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C+N V+LL+ I + K +V G FD +P+GIHI +Y +GSK + V I +G
Sbjct: 175 CKNT-VLLLKMI--EHKTAVAGLFDLDPFGIHIFCIYKYGSKETPD----IRVETIMRIG 227
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
+ D+ + N K L+ D+ + + G+L A +L + K K
Sbjct: 228 VCMEDVLEKNAYKDVFVRLNVHDLKMINRLVRFGELSA----------DLLFLQKIDGKV 277
Query: 167 EIEAL 171
E+EAL
Sbjct: 278 EMEAL 282
>gi|402467956|gb|EJW03175.1| hypothetical protein EDEG_02480 [Edhazardia aedis USNM 41457]
Length = 285
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 59 RCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIP 118
R + K + G FD +P+G+HI VY +GSK G V +++ +G+ D+ KY I
Sbjct: 170 RMEGKVEIFGLFDYDPFGMHIYCVYKYGSKKNTG------VLSMQRIGMCSDDVFKYKID 223
Query: 119 KLCRQILSKDDISKLKTFLEKGD 141
+ L+ D KL++ ++ D
Sbjct: 224 ENELLKLNVHDYKKLESLVKFDD 246
>gi|19074189|ref|NP_584795.1| similarity to MEIOTIC RECOMBINATION PROTEIN REC12 [Encephalitozoon
cuniculi GB-M1]
gi|74621943|sp|Q8SVS9.1|SPO11_ENCCU RecName: Full=Probable meiosis-specific protein SPO11 homolog
gi|19068831|emb|CAD25299.1| similarity to MEIOTIC RECOMBINATION PROTEIN REC12 [Encephalitozoon
cuniculi GB-M1]
Length = 303
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C+N V+LL+ I + K +V G FD +P+GIHI +Y +GSK + V I +G
Sbjct: 175 CKNT-VLLLKMI--EHKTAVAGLFDLDPFGIHIFCIYKYGSKETPD----IRVETIMRIG 227
Query: 107 LFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKA 166
+ D+ + N K L+ D+ + + G+L A +L + K K
Sbjct: 228 VCMEDVLEKNAYKDVFVKLNVHDLKMINRLVRFGELSA----------DLLFLRKIDGKV 277
Query: 167 EIEAL 171
E+EAL
Sbjct: 278 EMEAL 282
>gi|328769561|gb|EGF79605.1| hypothetical protein BATDEDRAFT_26068 [Batrachochytrium
dendrobatidis JAM81]
Length = 423
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
VL D +P G I Y FGSK+MA N LA P+ W+G+ P+ I L
Sbjct: 314 VLVLVDGDPSGFEIYCTYKFGSKSMA-YNTLLACPSSIWVGIHPTSW-MLTIDADSLIPL 371
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIE 169
+ D K+ L++ +RS ++++L +M K EI+
Sbjct: 372 TPHDRCKVYRLLDRN----HIRSCKEYQRQLSRMVFMNCKCEIQ 411
>gi|302839577|ref|XP_002951345.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
gi|300263320|gb|EFJ47521.1| hypothetical protein VOLCADRAFT_105081 [Volvox carteri f.
nagariensis]
Length = 2553
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFP---SDLEKYNIPKLCRQ 123
+G D NP G+ IL Y +GS + +P ++WLGL +D+E +++ Q
Sbjct: 188 VGLVDYNPAGVVILATYKYGSDRLGPEGRAHLLPGLRWLGLRSRQLADVEHHHL-----Q 242
Query: 124 ILSKDDISKLKTFLEK-GDLVAFVRSNASWEKELQKMSKEGEKA 166
LS+ D ++ E+ GD+ W EL M G K
Sbjct: 243 PLSERDRVMVRGLRERLGDM------EPGWAGELDVMEASGYKG 280
>gi|410672036|ref|YP_006924407.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
gi|409171164|gb|AFV25039.1| DNA topoisomerase VI subunit A [Methanolobus psychrophilus R15]
Length = 369
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+++ + +LK V+ D +P+ I +G+ A + +A P +++G+ PSD+
Sbjct: 237 IIKRMNDELKLPVVVFTDGDPWSYRIFASVAYGAIKSAHLSEHMATPGAQFIGVQPSDIV 296
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+Y +L L+ D++ L++ L W++++ + +KAE +A
Sbjct: 297 EY---ELSTDKLTDKDVAALRSELTDPRF-----ETDYWKEQINLQLEINKKAEQQAFAG 348
Query: 174 YEYKYLANKYLPSKF 188
++ + YLP++
Sbjct: 349 KGLDFVTDTYLPNRL 363
>gi|389860616|ref|YP_006362856.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
gi|388525520|gb|AFK50718.1| DNA topoisomerase VI subunit A [Thermogladius cellulolyticus 1633]
Length = 430
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+R + +LK V D +PYG +I +V+ GS ++ + RLA PN +++G+ +D+
Sbjct: 237 FVRRLNEELKLPVYVLTDSDPYGFYIYSVFKIGSITLSYESERLATPNARFIGVSMTDV 295
>gi|402587435|gb|EJW81370.1| type IIB DNA topoisomerase [Wuchereria bancrofti]
Length = 350
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 66 VLGSFDCNPYGIHILTVYMFG--SKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQ 123
+ G DC+P+GI I Y +G SK +N L+ + +W+GL L K+ I +
Sbjct: 222 LFGLLDCDPHGIEIAMTYKYGNCSKTFGVKNQTLS--HFEWIGLSRCKLPKFVISAVQFL 279
Query: 124 ILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
L ++ K++ ++ +A + N + EL +M + K E+EA+
Sbjct: 280 PLQTSELVKVEKLCQR---IAIL-GNTALLDELIRMRQCSNKLELEAV 323
>gi|159126138|gb|EDP51254.1| meiosis-specific topoisomerase Spo11, putative [Aspergillus
fumigatus A1163]
Length = 381
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----EKYNIPKLCRQILS 126
D +P G+ I++ Y +GS A N +L V + WLGL SD+ + + R LS
Sbjct: 267 DSDPDGMAIMSTYKYGSMAHAHDNEKLNVSKLCWLGLRTSDVIGGADSFGDEAFIR--LS 324
Query: 127 KDDISKLKTFLEKGDLVAFVRSNASWEKELQKM 159
D K L + A W ELQ+M
Sbjct: 325 LRDRKKAVAMLSNNPVWAEDGPEQEWRAELQQM 357
>gi|358056024|dbj|GAA98369.1| hypothetical protein E5Q_05055 [Mixia osmundae IAM 14324]
Length = 425
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEK 114
D +P+GI IL Y G+ +G+ L P + WLGL +DL++
Sbjct: 298 VDGDPHGIDILACYRHGTLRHSGKAADLVCPRMIWLGLRQNDLDE 342
>gi|359416373|ref|ZP_09208705.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
gi|358033264|gb|EHK01837.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 106
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSK 127
D +P+G +I +V GS ++A ++ RLA P+ K +G+ D+E+Y + + + K
Sbjct: 18 DGDPWGYYIYSVLKSGSMSLAFQSDRLATPDAKLIGMTMEDIEEYGLEHVTEDLKGK 74
>gi|242792903|ref|XP_002482051.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718639|gb|EED18059.1| meiosis-specific topoisomerase Spo11, putative [Talaromyces
stipitatus ATCC 10500]
Length = 409
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSD-LEKYNIPKLCRQ-----I 124
DC+ GI I++ Y +GS A + L P ++WLG D + K N ++ +
Sbjct: 283 DCD--GIAIMSTYKYGSMAHAHASAMLNAPKLQWLGTRIEDVIIKQNGAEVEDEDWVMIS 340
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
LS D+ K+++ L K + W ELQ M K E E L
Sbjct: 341 LSNRDVKKIRSMLMKNPVFGENGPQLDWRVELQIMMMLNTKVETEVL 387
>gi|169624501|ref|XP_001805656.1| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
gi|160705184|gb|EAT77175.2| hypothetical protein SNOG_15510 [Phaeosphaeria nodorum SN15]
Length = 319
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 70 FDCNPYGIHILTVYMFGSKNMAGRNLR------LAVPNIKWLGL-------FPSD---LE 113
D +P G+ I++ Y +GS +A + L++P+I+W+G+ P D +
Sbjct: 165 VDLDPDGMAIMSTYKYGSYRLAHEDTTRKETSGLSLPSIQWIGVRRHHICRTPVDEGGTD 224
Query: 114 KYNIPKLCRQI-LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
+P+L + L+ D +K LE DL A W ELQ M KAE++ LD
Sbjct: 225 ASVMPELQGLMKLTARDRTKAACMLEW-DLCAEGGPEEDWRHELQAMLMLNTKAEMQILD 283
>gi|290559172|gb|EFD92531.1| Spo11/DNA topoisomerase [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 86
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 105 LGLFPSDLEKYNIPKLCRQILS-KD-DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKE 162
+GL D++KY +L R ++ KD DI+++K + ++N W +EL KM K
Sbjct: 1 MGLTMEDIDKY---ELRRHLIKFKDVDIARIKQIKN----YEWFKNNKKWMEELSKMEKL 53
Query: 163 GEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
G K E++A ++ YLP K + +D+L
Sbjct: 54 GAKVELDAFTAKGLSFMTETYLPEKLKDKDFL 85
>gi|448720888|ref|ZP_21703482.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
gi|445780501|gb|EMA31383.1| DNA topoisomerase VI subunit A [Halobiforma nitratireducens JCM
10879]
Length = 363
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/178 (19%), Positives = 76/178 (42%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
+L + + +R ++ N + + + +G R + + + +L V
Sbjct: 192 ILAVETGGMRDRLVENGFDEEYNALVVHLKGQPARATRR----ITKRLHDELDLPVTVFT 247
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +GS A + LA P +++G+ P+D+ +Y +P LS D
Sbjct: 248 DGDPWSYRIYGSVAYGSIKSAHLSEYLATPEAQFIGIQPADIVEYELPT---DPLSDSDK 304
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
+ L++ L WE++++ + +K+E ++L ++ + YLP +
Sbjct: 305 NALESELSDPRF-----QTDYWEEQIELQLEIEKKSEQQSLASRGLDFVTDTYLPERL 357
>gi|388855589|emb|CCF50812.1| related to meiotic recombination protein SPO11 [Ustilago hordei]
Length = 375
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 27 TVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSV--LGSFDCNPYGIHILTVYM 84
TV+ ++V+ +G + I IL E+ C+ V +G FDC+PYGI I Y+
Sbjct: 220 TVARQWVVV--TGKGYPDHATRALIQILGAELECEKGGGVRMVGVFDCDPYGIDIHRQYV 277
Query: 85 FGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI--LSKDDISKLKTFLEKGDL 142
+ G ++W+G+ D N + Q+ L D+ +K L L
Sbjct: 278 ----QVCG--------GVEWVGVELDDFLAQNDSEQASQLVQLRADERAKAVRMLRT--L 323
Query: 143 VAFVRSNASWEKELQKMSKEGEKAEIEA 170
+ W +L M G K EIEA
Sbjct: 324 MGTSADEELWRTKLTNMLLTGYKVEIEA 351
>gi|225683482|gb|EEH21766.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 378
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 64 KSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQ 123
S LG+ +P I YMF + G +A+ +I+W GL S++ + +L
Sbjct: 257 PSALGTSPSSPPPI-----YMFVDSDPDG----MAIIDIQWFGLRSSEV----VSRLDAH 303
Query: 124 ILSKD--------DISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYE 175
I D D K + L + + A +W ELQ M KAEIE L YE
Sbjct: 304 IQDDDVLIPLTLRDRKKAQDMLARNPVFAEDGPEPTWRAELQHMLMSNVKAEIEVL--YE 361
Query: 176 YKYLANKYLPSKFR 189
+ ++L K R
Sbjct: 362 REEGVERWLDLKLR 375
>gi|402081027|gb|EJT76172.1| meiosis-specific topoisomerase Spo11 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 433
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 47 CENKIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLG 106
C + + L + R + V G D +PYGI IL Y GS N+ V I WLG
Sbjct: 246 CTRRFLFSLHQSRPYIP--VYGLVDYDPYGIRILRNYQRGSANLQ-HERDCTVSTIHWLG 302
Query: 107 LFPSDLEKYNI 117
+ +D+ Y++
Sbjct: 303 IRLADIRSYHV 313
>gi|435850856|ref|YP_007312442.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
gi|433661486|gb|AGB48912.1| DNA topoisomerase VI, subunit A [Methanomethylovorans hollandica
DSM 15978]
Length = 369
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/178 (17%), Positives = 78/178 (43%), Gaps = 12/178 (6%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
++ + + + +I N + I + +G R+ +++ + +L V+
Sbjct: 198 IIAIETGGMYARLIENGFDEKYNAILVHLKGQPARSTRR----IIKRMNEELSLPVVVFT 253
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P ++G+ PSD+ +Y +L L++ D+
Sbjct: 254 DGDPWSYRIFASVAYGAIKSAHLSEHMATPGAMFIGVQPSDIVEY---ELSTDKLTEKDV 310
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
L++ L + W++++ + +KAE +A ++ ++YLP +
Sbjct: 311 GALRSELSDPRF-----ATDYWKEQINLQLEINKKAEQQAFAGKGLDFVTDRYLPDRL 363
>gi|255598401|ref|XP_002537001.1| meiotic recombination protein spo11, putative [Ricinus communis]
gi|223517856|gb|EEF25382.1| meiotic recombination protein spo11, putative [Ricinus communis]
Length = 135
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
+L D NP G+ IL+ + FGS M R A N+KWLG+ DL+
Sbjct: 60 ILALVDWNPAGLAILSTFKFGSIGMGLEAYRYAC-NVKWLGVRGDDLQ 106
>gi|359417675|ref|ZP_09209767.1| DNA topoisomerase VI subunit A, partial [Candidatus Haloredivivus
sp. G17]
gi|358031969|gb|EHK00781.1| DNA topoisomerase VI subunit A [Candidatus Haloredivivus sp. G17]
Length = 139
Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 99 VPNIKWLGLFPSDLEKYNIPKLCRQILSK--DDISKLKTFLEKGDLVAFV-RSNASWEKE 155
P+ K +G+ D+E+Y + + + K D K + D++ + W+K+
Sbjct: 40 TPDAKLIGMTMEDIEEYGLEHVTEDLKGKPEDSGGPTKDYKRIHDVMDYEWMQKKEWQKQ 99
Query: 156 LQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRAEDWL 194
L+ M +G + E +AL +++AN+YLP K E +L
Sbjct: 100 LELMLDKGVRVEQQALAANSLEFVANEYLPEKIENETFL 138
>gi|91773183|ref|YP_565875.1| DNA topoisomerase VI subunit A [Methanococcoides burtonii DSM 6242]
gi|91712198|gb|ABE52125.1| DNA topoisomerase, type VI subunit A [Methanococcoides burtonii DSM
6242]
Length = 373
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLE 113
L++ + +L V+ D +P+ I +G+ A + +A P K++G+ P+D+
Sbjct: 241 LIKRMNEELGIPVVVFTDGDPWSYRIFASVAYGAIKSAHLSEFMATPAAKFIGVQPTDIV 300
Query: 114 KYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDM 173
+Y +L L+ D+ L++ L +N W++++ +KAE +A
Sbjct: 301 EY---ELSTDKLTDKDVDALRSELTDPRF-----ANDYWKEQISLQLSIKKKAEQQAFAG 352
Query: 174 YEYKYLANKYLPSKFRAED 192
++ + YLP++ D
Sbjct: 353 KGLDFVTDTYLPNRLSEMD 371
>gi|336476700|ref|YP_004615841.1| DNA topoisomerase [Methanosalsum zhilinae DSM 4017]
gi|335930081|gb|AEH60622.1| DNA topoisomerase (ATP-hydrolyzing) [Methanosalsum zhilinae DSM
4017]
Length = 373
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 11 VLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKKSVLGSF 70
++ + + + +I N + I + +G R+ L++ + +L V
Sbjct: 200 IIAIETGGMYARLIENGFDEKYNAILVHLKGQPARSTRR----LIKRMNDELGIPVAVFT 255
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P+ K++G+ PSD+ +Y +L L++ DI
Sbjct: 256 DGDPWSYRIYASIAYGAIKSAHLSEFMATPSAKFVGVQPSDIVEY---ELSTDKLTEKDI 312
Query: 131 SKLKTFLEKGDL-VAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
S L++ L + + + + E+QK KAE +A ++ + YLP +
Sbjct: 313 SALRSELSDPRFETDYWKEQINLQLEIQK------KAEQQAFAGKGLDFVTDVYLPERL 365
>gi|422015830|ref|ZP_16362423.1| fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF
domain [Providencia burhodogranariea DSM 19968]
gi|414096544|gb|EKT58201.1| fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF
domain [Providencia burhodogranariea DSM 19968]
Length = 748
Score = 38.9 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 59 RCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWL--GLFPSDLEKYN 116
R + SV G P G+ L + S +M+GR +VP +K+L GL P +L K
Sbjct: 660 RIGMPVSVCGEMAGQPLGVMALIALGYRSLSMSGR----SVPRVKYLIRGLQP-ELVKTL 714
Query: 117 IPKLCRQILSKDDISKLKTFLEKGDLVAFVR 147
+P+L S L F+EK L FVR
Sbjct: 715 VPQLLEAETSDAIRQALSLFMEKNGLGGFVR 745
>gi|346975573|gb|EGY19025.1| meiotic recombination protein rec12 [Verticillium dahliae VdLs.17]
Length = 425
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----------EKYNIPK- 119
D +P G+ I+ Y GS+++ + + +P ++WLG+ +DL ++ +P+
Sbjct: 289 DFDPDGLRIMQCYKHGSQSLR-HEIHVVLPRLQWLGIRSADLMPDGQRGADGDREGVPRE 347
Query: 120 -----LCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALD 172
LS D S + L D ++ + +ELQ M G K EI+A+D
Sbjct: 348 LPADPATVMPLSLRDRSCARKLLASFDEDGADVDDSEYRRELQIMLVLGVKGEIQAVD 405
>gi|121718184|ref|XP_001276125.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
gi|119404323|gb|EAW14699.1| conserved hypothetical protein [Aspergillus clavatus NRRL 1]
Length = 113
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 80 LTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL----EKYNIPKLCRQILSKDDISKLKT 135
++ Y +GS A N RL VP ++W+GL D+ ++ L + L+ D K
Sbjct: 1 MSTYKYGSMAHAHDNARLNVPGLRWMGLRTLDIIATADRAGDGTLTQ--LTARDRKKAIG 58
Query: 136 FLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ ++A W ELQ+M KAE+E L
Sbjct: 59 MMSNSPVLAADGPEQEWRAELQQMLMVNLKAELEIL 94
>gi|402217236|gb|EJT97317.1| DNA topoisomerase IV alpha subunit, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 248
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 14/102 (13%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNI-PKLCRQILSKDD 129
D +PYG+ IL ++ AG ++W+G+F ++ + I P+ + D
Sbjct: 157 DADPYGLDILNQFVKACDGQAGER-------VQWIGVFGTEWTELGIEPQQLLPLKPTDC 209
Query: 130 ISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
K E DL + W +ELQ M KAEIE L
Sbjct: 210 RKAFKMLRETPDL------PSRWREELQHMLFLQRKAEIECL 245
>gi|297527444|ref|YP_003669468.1| DNA topoisomerase [Staphylothermus hellenicus DSM 12710]
gi|297256360|gb|ADI32569.1| DNA topoisomerase (ATP-hydrolyzing) [Staphylothermus hellenicus DSM
12710]
Length = 445
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 54 LLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDL 112
+R + +LK + D +PYG +I +V+ GS ++ + RLA P+ K++G+ +D+
Sbjct: 245 FVRRLNEELKLPIYILADADPYGWYIYSVFKIGSITLSYESERLATPSAKFIGVTMTDV 303
>gi|386000804|ref|YP_005919103.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
gi|357208860|gb|AET63480.1| Type 2 DNA topoisomerase 6 subunit A [Methanosaeta harundinacea
6Ac]
Length = 360
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 76/184 (41%), Gaps = 12/184 (6%)
Query: 5 ESNFFIVLCLISSAIRICIITNTVSNFFIVIRLIREGAANRTCENKIVILLREIRCKLKK 64
E + V+ + + + +I N I + +G R+ L++ + +L
Sbjct: 183 EHDAKFVIAIETGGMHARLIENGFDQEHDAILVHLKGQPARSTRR----LIKRLNEELSL 238
Query: 65 SVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQI 124
V+ D +P+ I +G+ A + L P +++G+ P+D+ Y+ L
Sbjct: 239 PVVIFTDGDPWSYRIYASVAYGAIKSAYLSDYLVTPAAQFVGVQPTDIVNYD---LSTDK 295
Query: 125 LSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYL 184
L+ D+ L++ L + W++++Q K +KAE +A ++ YL
Sbjct: 296 LTDQDLQALRSELADPRF-----ATDYWKEQIQLQIKLSKKAEQQAFAGKGLDFVTKTYL 350
Query: 185 PSKF 188
P +
Sbjct: 351 PERL 354
>gi|401826082|ref|XP_003887135.1| DNA topoisomerase VI subunit A [Encephalitozoon hellem ATCC 50504]
gi|392998293|gb|AFM98154.1| DNA topoisomerase VI subunit A [Encephalitozoon hellem ATCC 50504]
Length = 299
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 63 KKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCR 122
+ ++ G FD +P+GIHI VY +GSK + V I+ +G+ D+ + N +
Sbjct: 186 RTAISGLFDFDPFGIHIFCVYKYGSKASPD----IKVSTIERIGVCMEDVLRRNCHEGGF 241
Query: 123 QILSKDD---ISKLKTFLEKGDLVAFV-RSNASWEKE--LQKMSKE 162
L+ D I +L F + D + F+ +SN E E K SKE
Sbjct: 242 SELNVYDLKMIDRLAKFKDLTDDLLFLKKSNKKVEMEAFFSKTSKE 287
>gi|294495184|ref|YP_003541677.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
gi|292666183|gb|ADE36032.1| DNA topoisomerase (ATP-hydrolyzing) [Methanohalophilus mahii DSM
5219]
Length = 367
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D +P+ I +G+ A + +A P K++G+ PSD+ +Y +L L+ D+
Sbjct: 252 DGDPWSYRIYASVAYGAIKSAHLSEFMATPAAKFVGVQPSDIVEY---ELSTDKLTDKDV 308
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKF 188
L++ +L W++++ G+KAE +A ++ YLP +
Sbjct: 309 DALRS-----ELTDPRFETDYWKEQINLQLDIGKKAEQQAFAGKGLDFVTKTYLPDRL 361
>gi|392577766|gb|EIW70895.1| hypothetical protein TREMEDRAFT_61408 [Tremella mesenterica DSM
1558]
Length = 562
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 70 FDCNPYGIHILTVYMFGSK----NMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
D +P+G+ IL+VY +GS+ ++ +L L ++WLG+ SD + L
Sbjct: 427 VDADPHGLDILSVYTYGSEATRYSVEHADLALG-ERLQWLGVKASDWISAGVAYDDLLEL 485
Query: 126 SKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEAL 171
+ D+ K + L + D+ + W++EL M KAEI+ +
Sbjct: 486 TDKDVQKAMSML-RSDI------PSEWKRELAHMLHLNRKAEIQVI 524
>gi|449501862|ref|XP_004161479.1| PREDICTED: meiotic recombination protein SPO11-2-like [Cucumis
sativus]
Length = 346
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 66 VLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQIL 125
+ G D NP G+ IL + +GS M R A N+KWLG+ DL+ IP+ L
Sbjct: 266 MFGLVDWNPAGLAILCTFKYGSIGMGLEAYRYAC-NVKWLGVRGDDLQL--IPQESLVPL 322
Query: 126 SKDDISKLKTFLE 138
D+ K+ L
Sbjct: 323 KPRDLQIAKSLLS 335
>gi|413921268|gb|AFW61200.1| hypothetical protein ZEAMMB73_857840 [Zea mays]
Length = 100
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 101 NIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMS 160
N+KWLG+ DL + IP+ Q L D+ K+ + L S EL M
Sbjct: 11 NVKWLGVRGGDL--HLIPEDAFQELKPRDLQIAKSLMSSKFL------QESHRAELALMV 62
Query: 161 KEGEKAEIEALDMYEYKYLANKYLPSKFR 189
+ G++A+IEAL + + +L KY+ K R
Sbjct: 63 ERGKRADIEALYSHGFDFL-GKYIARKIR 90
>gi|429328614|gb|AFZ80374.1| hypothetical protein BEWA_032270 [Babesia equi]
Length = 223
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 67 LGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNI----------KWLGLFPSDLEKYN 116
LG +D P+G I Y GS + +L +P++ KW+G+ SD+E+Y
Sbjct: 96 LGDYD--PHGFLIFLSYAKGSVSTRINSL---IPDVHINRRKGNRYKWIGIRASDVEEYG 150
Query: 117 IPKLCRQILSKDDISKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEY 176
I K+ L+K ++ L+ + + V N E+++ + +K EIEAL+
Sbjct: 151 IKKVVD--LTKREMRILENLISDPE----VAENTLLRHEIEQ-QRTVQKIEIEALEESTS 203
Query: 177 KYLANKYLPSKFRAEDWL 194
+ +Y+ K + +W+
Sbjct: 204 TGVLFEYVIRKILSREWI 221
>gi|422021875|ref|ZP_16368385.1| fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF
domain [Providencia sneebia DSM 19967]
gi|414098472|gb|EKT60121.1| fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF
domain [Providencia sneebia DSM 19967]
Length = 748
Score = 37.0 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 59 RCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWL--GLFPSDLEKYN 116
R L SV G P G+ L + S +M GR +VP +K+L GL P DL
Sbjct: 660 RIGLPVSVCGEMAGQPLGVAALIALGYRSLSMNGR----SVPRVKYLIRGLQP-DLVSAL 714
Query: 117 IPKLCRQILSKDDISKLKTFLEKGDLVAFVR 147
+P L S K+ F+EK L FVR
Sbjct: 715 LPDLLTAETSSMIREKISLFMEKNGLGGFVR 745
>gi|7635881|emb|CAB88597.1| related to MEIOTIC RECOMBINATION PROTEIN REC12 [Neurospora crassa]
Length = 474
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 50 KIVILLREIRCKLKKSVLGSFDCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFP 109
K + + +R +L L FD P+GI +L Y +GS+ + R V ++WLG+
Sbjct: 265 KFLAAIHSVRPRLLMFALVDFD--PHGISVLRTYQYGSQRL-DHEERTKVFGLRWLGIRS 321
Query: 110 SDL 112
SD+
Sbjct: 322 SDV 324
>gi|255514007|gb|EET90271.1| DNA topoisomerase (ATP-hydrolyzing) [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 370
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 71 DCNPYGIHILTVYMFGSKNMAGRNLRLAVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDI 130
D + +G +I GS N+A +A P +++G+ +D+E Y+ K ++ DI
Sbjct: 251 DGDAWGWYIYWTIKTGSMNLAYIGRDIATPEARFIGVTMADIEHYDFLKNLTMRATEVDI 310
Query: 131 SKLKTFLEKGDLVAFVRSNASWEKELQKMSKEGEKAEIEALDMYEYKYLANKYLPSKFRA 190
+ + L ++ + W EL+K+ + +K E + L ++ + Y+ K +
Sbjct: 311 KRAQEMLN----YPWINRHKEWVAELKKVLETKKKLEQDTLQGPRLTFV-DDYIREKIKN 365
Query: 191 EDWL 194
D+L
Sbjct: 366 RDFL 369
>gi|260806502|ref|XP_002598123.1| hypothetical protein BRAFLDRAFT_85659 [Branchiostoma floridae]
gi|229283394|gb|EEN54135.1| hypothetical protein BRAFLDRAFT_85659 [Branchiostoma floridae]
Length = 244
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 98 AVPNIKWLGLFPSDLEKYNIPKLCRQILSKDDISKLKTFLEKGDLVAF-VRSNASWEKEL 156
A N + +G+ P D + Y I +C KD I+ +KT LE+ VA V SN+S + ++
Sbjct: 58 AAENRQTVGISPGDFDTYAIAYIC-----KDHITYMKTSLEETKTVATEVASNSSHDDDM 112
Query: 157 QKMSKEGEKAEIEALDMYEYKY 178
S + E A + Y KY
Sbjct: 113 STKSAD-ESASCDVTQPYVVKY 133
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,832,020,575
Number of Sequences: 23463169
Number of extensions: 109586948
Number of successful extensions: 268372
Number of sequences better than 100.0: 609
Number of HSP's better than 100.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 223
Number of HSP's that attempted gapping in prelim test: 267430
Number of HSP's gapped (non-prelim): 629
length of query: 194
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 59
effective length of database: 9,191,667,552
effective search space: 542308385568
effective search space used: 542308385568
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 72 (32.3 bits)