Query 029353
Match_columns 194
No_of_seqs 139 out of 1083
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 18:55:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029353.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029353hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h3u_A Hypothetical protein; s 99.9 3.8E-21 1.3E-25 149.9 11.5 109 79-192 20-132 (158)
2 3ff2_A Uncharacterized cystati 99.8 9.4E-20 3.2E-24 135.0 12.8 104 84-192 2-111 (117)
3 3fh1_A Uncharacterized NTF2-li 99.8 3.1E-19 1.1E-23 134.5 11.4 103 83-192 16-121 (129)
4 3ebt_A Uncharacterized NTF2-li 99.8 7.1E-19 2.4E-23 131.5 12.1 104 84-192 3-115 (132)
5 3f14_A Uncharacterized NTF2-li 99.8 9.9E-19 3.4E-23 129.4 11.6 100 87-192 3-105 (112)
6 3dm8_A Uncharacterized protein 99.8 1.1E-18 3.8E-23 134.1 12.1 105 83-192 3-117 (143)
7 3f9s_A Putative polyketide cyc 99.8 2E-18 6.8E-23 132.0 13.3 104 84-192 6-124 (146)
8 3k0z_A Putative polyketide cyc 99.8 1.9E-18 6.5E-23 135.5 13.2 103 84-192 34-138 (159)
9 2k54_A Protein ATU0742; protei 99.8 2.2E-18 7.7E-23 128.1 12.0 102 85-192 4-107 (123)
10 3ec9_A Uncharacterized NTF2-li 99.8 3.3E-18 1.1E-22 129.7 13.0 104 84-192 12-123 (140)
11 2gex_A SNOL; alpha+beta barrel 99.8 6.1E-18 2.1E-22 130.5 14.3 101 85-192 5-117 (152)
12 3kkg_A Putative snoal-like pol 99.8 3.1E-18 1.1E-22 131.1 12.3 103 84-192 9-125 (146)
13 3fgy_A Uncharacterized NTF2-li 99.8 1.1E-18 3.8E-23 131.1 8.9 104 84-192 5-115 (135)
14 3g16_A Uncharacterized protein 99.8 4.9E-18 1.7E-22 134.8 12.8 105 84-192 10-118 (156)
15 2f99_A Aklanonic acid methyl e 99.8 2.6E-18 9.1E-23 133.2 10.5 104 84-192 11-126 (153)
16 3g8z_A Protein of unknown func 99.8 1.4E-17 4.9E-22 128.7 14.5 107 81-192 17-130 (148)
17 1sjw_A Nogalonic acid methyl e 99.8 3.5E-18 1.2E-22 129.7 9.9 103 85-192 3-117 (144)
18 3ehc_A Snoal-like polyketide c 99.7 6.1E-18 2.1E-22 126.8 10.5 98 85-192 4-112 (128)
19 2gey_A ACLR protein; alpha+bet 99.7 3.2E-17 1.1E-21 127.5 13.9 100 85-192 5-115 (158)
20 3grd_A Uncharacterized NTF2-su 99.7 2.5E-18 8.6E-23 129.2 7.1 104 84-192 4-117 (134)
21 3hk4_A MLR7391 protein; NTF2-l 99.7 4.6E-17 1.6E-21 125.9 13.5 107 81-192 17-130 (136)
22 2a15_A Hypothetical protein RV 99.7 1E-16 3.4E-21 121.1 14.1 105 83-192 6-122 (139)
23 1oh0_A Steroid delta-isomerase 99.7 2.3E-17 7.8E-22 122.6 9.8 105 84-192 7-114 (131)
24 1ohp_A Steroid delta-isomerase 99.7 8.3E-17 2.8E-21 117.2 12.1 102 85-192 6-110 (125)
25 1nww_A Limonene-1,2-epoxide hy 99.7 2.3E-16 7.8E-21 120.4 14.9 102 84-192 22-128 (149)
26 3i0y_A Putative polyketide cyc 99.7 6.9E-17 2.3E-21 121.7 11.2 102 84-192 8-123 (140)
27 2bng_A MB2760; epoxide hydrola 99.7 1.5E-16 5E-21 122.3 12.5 102 84-192 15-118 (149)
28 3dmc_A NTF2-like protein; stru 99.7 2.6E-16 9E-21 120.4 12.8 103 86-192 14-121 (134)
29 1s5a_A Hypothetical protein YE 99.7 8.4E-17 2.9E-21 122.4 9.6 103 85-192 11-123 (150)
30 3g0k_A Putative membrane prote 99.7 1.4E-16 4.7E-21 124.1 10.8 99 84-192 27-128 (148)
31 3en8_A Uncharacterized NTF-2 l 99.7 3.4E-16 1.2E-20 118.9 12.4 100 84-192 5-104 (128)
32 3f8h_A Putative polyketide cyc 99.7 1.1E-16 3.7E-21 124.5 9.5 103 84-192 18-133 (150)
33 3f7x_A Putative polyketide cyc 99.7 3.4E-16 1.2E-20 121.6 12.1 100 84-192 20-135 (151)
34 3mso_A Steroid delta-isomerase 99.7 2.9E-16 9.9E-21 121.8 10.9 102 83-192 8-111 (143)
35 1tuh_A BAL32A, hypothetical pr 99.7 1.6E-15 5.5E-20 117.3 14.6 103 85-192 30-139 (156)
36 3h3h_A Uncharacterized snoal-l 99.7 1.1E-16 3.7E-21 119.4 7.4 99 85-192 9-114 (122)
37 1z1s_A Hypothetical protein PA 99.6 5.8E-16 2E-20 121.3 9.4 103 84-192 23-135 (163)
38 3er7_A Uncharacterized NTF2-li 99.6 2.3E-16 7.7E-21 121.6 6.7 103 84-192 2-114 (131)
39 3dxo_A Uncharacterized snoal-l 99.6 3.9E-15 1.3E-19 111.7 12.8 102 85-192 4-110 (121)
40 3flj_A Uncharacterized protein 99.6 3.7E-15 1.3E-19 118.2 11.3 99 86-192 20-118 (155)
41 3f40_A Uncharacterized NTF2-li 99.6 1.2E-14 4E-19 108.5 13.3 96 83-192 5-100 (114)
42 3rga_A Epoxide hydrolase; NTF2 99.6 9.3E-15 3.2E-19 125.1 13.3 103 84-192 138-265 (283)
43 3f8x_A Putative delta-5-3-keto 99.6 1.7E-14 5.7E-19 113.1 11.9 101 84-192 20-120 (148)
44 3rga_A Epoxide hydrolase; NTF2 99.6 1.8E-14 6.1E-19 123.4 11.0 103 84-192 6-116 (283)
45 3hx8_A MLR2180 protein, putati 99.5 1.5E-13 5E-18 101.2 13.5 106 85-194 7-119 (129)
46 3lyg_A NTF2-like protein of un 99.5 2.7E-13 9.3E-18 101.5 14.0 104 84-192 2-105 (120)
47 3d9r_A Ketosteroid isomerase-l 99.5 2.4E-13 8.1E-18 101.0 13.1 107 84-194 11-126 (135)
48 3jum_A Phenazine biosynthesis 99.5 1.1E-13 3.8E-18 112.6 9.5 103 85-192 42-156 (185)
49 3ff0_A Phenazine biosynthesis 99.4 5.1E-13 1.7E-17 106.7 8.7 104 84-192 19-134 (163)
50 3f7s_A Uncharacterized NTF2-li 99.3 2.8E-11 9.6E-16 91.5 14.0 106 85-194 9-121 (142)
51 3h51_A Putative calcium/calmod 99.3 4.9E-11 1.7E-15 92.1 14.8 107 84-194 20-133 (156)
52 2gxf_A Hypothetical protein YY 99.3 7.4E-12 2.5E-16 95.2 9.8 107 85-194 4-117 (142)
53 3gwr_A Putative calcium/calmod 99.2 2.5E-10 8.6E-15 88.3 13.4 105 84-194 8-121 (144)
54 3rob_A Uncharacterized conserv 99.2 2.7E-10 9.2E-15 87.8 12.9 106 85-194 18-130 (139)
55 2ux0_A Calcium-calmodulin depe 99.2 3.2E-10 1.1E-14 85.8 12.9 107 85-194 14-130 (143)
56 3cu3_A Domain of unknown funct 99.2 3.2E-10 1.1E-14 88.9 11.8 105 85-194 17-131 (172)
57 4i4k_A Uncharacterized protein 99.1 1.4E-09 4.7E-14 83.5 11.7 105 85-194 20-133 (143)
58 3gzr_A Uncharacterized protein 99.1 1.9E-09 6.5E-14 83.3 12.6 105 85-194 7-123 (146)
59 3mg1_A OCP, orange carotenoid 99.1 3.2E-10 1.1E-14 97.9 8.6 100 87-193 195-300 (323)
60 3ke7_A Putative ketosteroid is 99.0 8.7E-09 3E-13 79.3 14.1 102 87-194 17-123 (134)
61 3bb9_A Putative orphan protein 99.0 4.2E-09 1.4E-13 80.5 11.1 106 83-194 29-143 (148)
62 3b7c_A Uncharacterized protein 98.9 2.1E-08 7.2E-13 74.3 12.6 105 85-194 6-116 (122)
63 2chc_A Protein RV3472; hypothe 98.8 1.3E-07 4.6E-12 73.4 13.6 104 85-194 15-125 (170)
64 2rcd_A Uncharacterized protein 98.8 5.4E-08 1.8E-12 72.7 10.4 103 86-194 16-120 (129)
65 1tp6_A Hypothetical protein PA 98.7 1.6E-07 5.4E-12 71.0 10.7 95 90-191 12-117 (128)
66 3b8l_A Uncharacterized protein 98.7 2.8E-07 9.7E-12 71.0 12.1 107 84-194 28-145 (163)
67 3cnx_A Uncharacterized protein 98.6 2E-07 6.9E-12 74.4 10.7 104 85-194 13-149 (170)
68 2rgq_A Domain of unknown funct 98.6 1.1E-06 3.7E-11 66.7 14.1 105 85-194 11-121 (144)
69 2rfr_A Uncharacterized protein 98.6 5.9E-07 2E-11 68.2 11.5 105 85-194 20-135 (155)
70 2owp_A Hypothetical protein BX 98.6 8E-07 2.7E-11 67.4 11.8 103 86-194 13-119 (129)
71 3a76_A Gamma-hexachlorocyclohe 98.6 5.7E-07 2E-11 70.8 11.0 107 84-194 31-147 (176)
72 2f86_B Hypothetical protein K1 98.5 3.1E-07 1.1E-11 71.0 8.9 104 85-194 13-126 (143)
73 3blz_A NTF2-like protein of un 98.5 2.3E-06 7.7E-11 63.9 11.3 103 85-194 13-118 (128)
74 2r4i_A Uncharacterized protein 98.4 2.9E-06 1E-10 61.3 11.5 105 85-194 7-115 (123)
75 3gzb_A Putative snoal-like pol 98.4 1.3E-05 4.5E-10 61.6 14.9 106 84-192 20-136 (154)
76 3fsd_A NTF2-like protein of un 98.4 6.8E-06 2.3E-10 61.5 12.1 105 84-194 14-126 (134)
77 3duk_A NTF2-like protein of un 98.3 6.7E-06 2.3E-10 61.8 10.9 101 85-194 13-117 (125)
78 3ef8_A Putative scyalone dehyd 98.3 4.9E-06 1.7E-10 63.6 9.6 106 85-194 12-126 (150)
79 3fka_A Uncharacterized NTF-2 l 98.2 3.1E-05 1.1E-09 57.6 11.6 103 85-194 10-113 (120)
80 3ejv_A Uncharacterized protein 98.1 1.7E-05 6E-10 63.0 10.5 57 84-140 26-89 (179)
81 2imj_A Hypothetical protein DU 98.1 5.4E-05 1.9E-09 59.2 12.1 101 85-191 18-121 (166)
82 3soy_A NTF2-like superfamily p 98.0 1.4E-05 4.9E-10 61.2 8.0 106 85-194 11-129 (145)
83 3ecf_A NTF2-like protein; stru 97.9 7.9E-05 2.7E-09 55.7 9.7 98 86-193 7-105 (130)
84 3ksp_A Calcium/calmodulin-depe 97.9 0.00013 4.6E-09 55.5 11.2 105 84-194 9-119 (129)
85 4gb5_A Uncharacterized protein 97.8 0.00024 8.2E-09 54.2 10.6 105 85-193 12-134 (159)
86 2gbw_B Biphenyl 2,3-dioxygenas 97.2 0.013 4.5E-07 45.7 14.3 55 85-139 15-87 (174)
87 2b1x_B Naphthalene dioxygenase 97.2 0.0077 2.6E-07 46.7 12.2 54 85-138 14-82 (172)
88 3e99_A Benzoate 1,2-dioxygenas 96.9 0.019 6.5E-07 44.9 12.2 107 85-193 9-143 (164)
89 1idp_A Scytalone dehydratase; 96.9 0.0021 7.3E-08 51.1 6.5 53 84-136 17-72 (172)
90 1uli_B Biphenyl dioxygenase sm 96.7 0.044 1.5E-06 43.4 13.0 53 86-138 26-96 (187)
91 3eby_A Beta subunit of A putat 96.6 0.019 6.5E-07 44.3 10.2 54 85-138 15-78 (163)
92 3nv0_B NTF2-related export pro 96.4 0.012 4.2E-07 45.9 7.7 97 86-193 37-145 (154)
93 3gzx_B Biphenyl dioxygenase su 96.3 0.13 4.5E-06 40.9 13.8 107 86-193 25-165 (186)
94 1gy6_A Nuclear transport facto 96.2 0.053 1.8E-06 40.5 10.4 99 86-193 11-114 (127)
95 1zo2_A NTF2, nuclear transport 96.2 0.073 2.5E-06 39.9 11.1 99 86-193 15-119 (129)
96 1wql_B Ethylbenzene dioxygenas 96.1 0.14 4.9E-06 40.4 13.1 54 85-138 24-95 (186)
97 1gy7_A Nuclear transport facto 96.1 0.059 2E-06 40.2 10.0 99 86-193 9-114 (125)
98 2bmo_B Oxygenase-beta NBDO; ni 95.7 0.31 1E-05 38.9 13.3 34 86-119 34-68 (194)
99 3ujm_A Rasputin; NTF2-like fol 95.6 0.17 5.7E-06 37.4 10.5 100 86-193 7-112 (120)
100 2qiy_A UBP3-associated protein 95.4 0.14 4.8E-06 39.4 10.1 64 86-151 15-91 (154)
101 1jkg_A P15; NTF2-like domain, 95.4 0.19 6.6E-06 38.0 10.7 49 86-137 17-65 (140)
102 3soa_A Calcium/calmodulin-depe 94.8 0.13 4.4E-06 45.6 9.2 110 82-194 316-435 (444)
103 1jkg_B TAP; NTF2-like domain, 94.5 0.1 3.6E-06 43.4 7.3 52 86-137 18-100 (250)
104 3q90_A RAS GTPase-activating p 93.1 0.59 2E-05 35.3 8.8 62 86-151 13-80 (140)
105 1of5_A MRNA export factor MEX6 92.3 0.54 1.9E-05 38.6 8.1 30 86-116 14-43 (221)
106 1q40_B MEX67, mRNA export fact 85.7 1.5 5.1E-05 35.9 5.9 30 86-116 17-46 (219)
107 4hyz_A Uncharacterized protein 84.7 9.2 0.00031 27.6 9.9 92 85-192 15-110 (114)
108 3hzp_A NTF2-like protein of un 83.7 12 0.00041 28.2 13.9 100 85-194 3-115 (131)
109 1vqq_A Saupbp2A, penicillin-bi 82.9 6.8 0.00023 36.6 9.9 97 86-193 4-103 (646)
110 3k7c_A Putative NTF2-like tran 78.9 17 0.00058 26.7 11.9 95 86-193 9-111 (114)
111 1q42_A MTR2, mRNA transport re 55.8 12 0.00041 30.1 4.1 51 84-136 27-97 (201)
112 2i9w_A Hypothetical protein; c 51.6 87 0.003 24.7 10.8 89 85-189 52-143 (184)
113 2jq5_A SEC-C motif; structural 51.1 72 0.0025 23.6 11.2 92 84-192 26-120 (128)
114 3nv0_A Nuclear RNA export fact 49.1 30 0.001 27.6 5.5 31 86-116 16-51 (205)
115 2cw9_A Translocase of inner mi 34.9 14 0.00049 29.0 1.5 24 90-113 66-89 (194)
116 2pp6_A Gifsy-2 prophage ATP-bi 20.1 1.6E+02 0.0056 21.0 4.6 20 168-193 72-91 (102)
No 1
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=99.85 E-value=3.8e-21 Score=149.89 Aligned_cols=109 Identities=13% Similarity=0.152 Sum_probs=94.6
Q ss_pred CCCCCCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCC
Q 029353 79 VDGDDGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSS 158 (194)
Q Consensus 79 ~~~~~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d 158 (194)
+..+.+...++|++|++|||++|++++.+||+||++|++|+.+++++|++++++|++.++.. ++++++++..++++| +
T Consensus 20 ~~~~~mt~~eiv~~y~~A~n~~D~d~~~~l~a~D~v~~d~~~g~~~~Greai~~~~~~~~~~-~~d~~~~v~~~~~~g-d 97 (158)
T 4h3u_A 20 FQSNAMTTPEIVTAWAAAWTGTNPNALGTLFAADGTYVDHAIGATMTGREQISGWKARTDAM-IENVHVTITKAYRAG-D 97 (158)
T ss_dssp -----CCCCHHHHHHHHHHHSSCHHHHHTTEEEEEEEEETTTTEEEESHHHHHHHHHHHHHH-EEEEEEEEEEEEEET-T
T ss_pred eccCCCCHHHHHHHHHHHHHcCCHHHHHHHhcccceEeccCCCceEecchhhhhhhhhhhcc-CCccceeEeEEeecC-c
Confidence 34555667799999999999999999999999999999999888899999999999987654 699999999999998 8
Q ss_pred eEEEEEEEEe----CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 159 AVGVTWHLEW----KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 159 ~Vav~~~~e~----~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
.|+++|.+.. .|+++.+ +++++|+| +||||+
T Consensus 98 ~v~~~~~~~gt~~~tG~~~~~-~~~~v~~~--~dGkI~ 132 (158)
T 4h3u_A 98 HVTIEAVYGGHIKGAPTPFAV-PMATLLRT--RGEEIT 132 (158)
T ss_dssp EEEEEEEEEEEETTSSSCEEE-EEEEEEEE--ETTEEE
T ss_pred eEEEEEEEEEEecCccCccee-eeEEEEEE--ECCEEE
Confidence 9988887743 4899999 79999999 899996
No 2
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.83 E-value=9.4e-20 Score=134.95 Aligned_cols=104 Identities=16% Similarity=0.127 Sum_probs=92.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
++++++|++||++||++|++++.++++||+++|+|+.++...|+++++++++.++.. +|+++++++.++++| +.|+++
T Consensus 2 m~~~~~v~~~~~a~n~~D~~~~~~~~a~D~v~h~~~~~~~~~G~~~~~~~~~~~~~~-~p~~~~~i~~~~~~G-d~V~~~ 79 (117)
T 3ff2_A 2 MSNLETAKAMIAAYNAQDVDTYVSYMTDDACEANYRGDVVREGKEGTRSGLAAAFAR-WPQNHAEIKDAQQVG-TYVLMR 79 (117)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETTSCEEECHHHHHHHHHHHHHHH-CTTCEEEEEEEEEET-TEEEEE
T ss_pred cCHHHHHHHHHHHHcccCHHHHHHhcCCcEEEEeCCCCccccCHHHHHHHHHHHHhh-CCCceEEEEEEEEEC-CEEEEE
Confidence 567899999999999999999999999999999987766789999999999987764 699999999999999 899998
Q ss_pred EEEEeC----Cee--EeeeceEEEEEEEeeCCeEE
Q 029353 164 WHLEWK----GKP--FPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~e~~----Gk~--i~~t~g~~~fr~~~~dGKI~ 192 (194)
++.... |++ ..+ .++++|+| +||||+
T Consensus 80 ~~~~~~~~~~G~~~~~~~-~~~~ifr~--~dGkI~ 111 (117)
T 3ff2_A 80 EHVTRGPATDGSPLVEPF-DVVAVYSF--EGDKCS 111 (117)
T ss_dssp EEEECCSCSSSCCCCCCE-EEEEEEEE--ETTEEE
T ss_pred EEEEecCCCCCCcccccE-EEEEEEEE--ECCEEE
Confidence 887653 642 567 68999999 899996
No 3
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.80 E-value=3.1e-19 Score=134.47 Aligned_cols=103 Identities=19% Similarity=0.365 Sum_probs=91.1
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC---CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCe
Q 029353 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSA 159 (194)
Q Consensus 83 ~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~---~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~ 159 (194)
...+++++++||++|+++|++++.+||+||+++++|. .+.++.|++++++++.. +. .+|+++++++.++++| +.
T Consensus 16 ~~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~p~~~~~g~~~~G~~~i~~~~~~-~~-~~~~~~~~i~~~~~~g-d~ 92 (129)
T 3fh1_A 16 SEQTAEIMRRFNDVFQLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSA-IA-TQPGTRFDLEETFVAG-DR 92 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGHHHHEEEEEEEECSCSTTTCCEEESHHHHHHHHHH-HH-HCTTCEEEEEEEEEET-TE
T ss_pred chhHHHHHHHHHHHHHccCHHHHHHhcCCCEEEECCCCCCCCCcccCHHHHHHHHHH-Hh-cCCCceEEEeEEEEcC-CE
Confidence 3468999999999999999999999999999999974 34456999999999998 65 4799999999999998 89
Q ss_pred EEEEEEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+++|++.. |+++.+ .++++|+| +||||+
T Consensus 93 v~~~~~~~~-G~~~~~-~~~~~~~~--~dGkI~ 121 (129)
T 3fh1_A 93 ATIRWRYWM-ADGNSV-RGVNLMRV--QDGRIV 121 (129)
T ss_dssp EEEEEEEEC-TTSCEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEC-CCeeEE-eceEEEEE--cCCEEE
Confidence 999998864 788889 79999999 899996
No 4
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=99.79 E-value=7.1e-19 Score=131.48 Aligned_cols=104 Identities=16% Similarity=0.271 Sum_probs=91.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC----CC--CCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCC
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI----FP--RPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDS 157 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~----~~--g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~ 157 (194)
.++++++++||++|+++|++++.++++||++|++|. ++ +++.|+++++++++.++.. +++++++++.++++|
T Consensus 3 ~~~~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~~~~~~p~~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g- 80 (132)
T 3ebt_A 3 SNNMQTVRESYEAFHRRDLPGVLAALAPDVRWTHPDGMSPYGLGGTKHGHDEVIAFIRHVPTH-IAEMRLAPDEFIESG- 80 (132)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECGGGGGGTCCEEEEHHHHHHHHHHHGGGT-EEEEEEEEEEEEEET-
T ss_pred chHHHHHHHHHHHHhccCHHHHHHhcCCCEEEEeCCCCCCcccCCcCcCHHHHHHHHHHHHhh-CCceEEEEeEEEEeC-
Confidence 358899999999999999999999999999999873 32 6889999999999987764 588999999999988
Q ss_pred CeEEEEEEEEe---CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 158 SAVGVTWHLEW---KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 158 d~Vav~~~~e~---~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.|+++|+... .|+++.+ +++++|++ +||||+
T Consensus 81 d~v~v~~~~~~~~~~G~~~~~-~~~~v~~~--~dGkI~ 115 (132)
T 3ebt_A 81 ERIVVLGTRRVTAVNGRSATL-KFVHVWRF--ENGRAV 115 (132)
T ss_dssp TEEEEEEEEEEEETTSCEEEE-EEEEEEEE--ETTEEE
T ss_pred CEEEEEEEEEEEeCCCCEEee-eEEEEEEE--ECCEEE
Confidence 88888776643 5999999 79999999 899996
No 5
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=99.79 E-value=9.9e-19 Score=129.37 Aligned_cols=100 Identities=13% Similarity=0.205 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEEEE
Q 029353 87 AVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTWHL 166 (194)
Q Consensus 87 ~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~~~ 166 (194)
.++|++||+||+++|++++.++++||++|+.++. .+..|+++++++++.+.... ++.+++++.++++| +.|++++++
T Consensus 3 ~~~v~~~~~a~~~gD~~~~~~~ladDv~w~~~g~-~~~~G~~~~~~~~~~~~~~~-~~~~~~i~~~i~~G-d~Vvv~~~~ 79 (112)
T 3f14_A 3 ETTHYSIAQHFSSGDFPAVYACFNDIIEWNIIGN-QVVKGKADVIDFCNKMLPEM-KGAVLTNDNVIQNE-NQIVIEGKC 79 (112)
T ss_dssp HHHHHHHHHHHHTTCGGGTGGGEEEEEEEEETTT-EEEESHHHHHHHHHHHHHHH-HTSEEEEEEEEECS-SEEEEEEEE
T ss_pred hHHHHHHHHHHHcCCHHHHHHhcCCceEEEEcCC-ccEecHHHHHHHHHHHHhhc-CCcEEEEEEEEEeC-CEEEEEEEE
Confidence 4789999999999999999999999999998764 46899999999999877654 56899999999998 899998877
Q ss_pred Ee---CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 167 EW---KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 167 e~---~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
.. +|+++.+ .+|++|+| +||||+
T Consensus 80 ~~~~~~g~~~~~-~~~~vf~~--~dGkI~ 105 (112)
T 3f14_A 80 RYFDAEGKEAFV-SYCDIYRF--ENDTIK 105 (112)
T ss_dssp EEECTTSCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEeCCCCEEEE-EEEEEEEE--eCCEEE
Confidence 54 5999999 79999999 899996
No 6
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=99.79 E-value=1.1e-18 Score=134.09 Aligned_cols=105 Identities=15% Similarity=0.224 Sum_probs=90.2
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC------CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecC
Q 029353 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI------FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAED 156 (194)
Q Consensus 83 ~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~------~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G 156 (194)
++++.+++++||+||+++|++++.+||+||++|++|+ +.|+++|+++++++|+.+... +++.+++++.++++|
T Consensus 3 ~~~~~~~v~~~~~a~~~gD~~~l~~l~a~Dv~~~~~g~~~~~p~~g~~~G~~av~~~~~~~~~~-~~~~~~~~~~~~~~g 81 (143)
T 3dm8_A 3 EHSLWRFSRALHRALNDRQTEELATIIDDNIDWAIYGPIDMFPFFGARQGKAAVLEVCRQIADS-VRIYRYHRESVMLGI 81 (143)
T ss_dssp SCHHHHHHHHHHHHHHHCCCHHHHHHEEEEEEEEEESCTTTCTTCEEEESHHHHHHHHHHHHHH-EEEEEEEEEEEEECS
T ss_pred cchHHHHHHHHHHHHHCCCHHHHHHhcCCCeEEEecCCCCcCCCCccccCHHHHHHHHHHHHHh-cCcceEEEEEEEEcC
Confidence 4678999999999999999999999999999999864 236789999999999987665 477899999999988
Q ss_pred CCeEEEE--EEEEe--CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 157 SSAVGVT--WHLEW--KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 157 ~d~Vav~--~~~e~--~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.|++. ++... .|+++.+ ++|++|++ +||||+
T Consensus 82 -d~v~v~~~~~~~~~~tG~~~~~-~~~~~~~v--~dGkI~ 117 (143)
T 3dm8_A 82 -DSAASMVRYSLTAAGTNRPISV-RMALFTQF--QNGRLT 117 (143)
T ss_dssp -SEEEEEEEEEEEETTTCCEEEE-EEEEEEEE--ETTEEE
T ss_pred -CeEEEEEEEEEEEeCCCCEEEE-EEEEEEEE--ECCEEE
Confidence 777764 44333 5999999 79999999 899996
No 7
>3f9s_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative; 1.76A {Acidithiobacillus ferrooxidans atcc 23}
Probab=99.78 E-value=2e-18 Score=131.99 Aligned_cols=104 Identities=17% Similarity=0.221 Sum_probs=92.5
Q ss_pred CcHHHHHHHHHH-HHhCCCHHHHHhhhcCCeE-EEcCC--CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCe
Q 029353 84 GGGAVVVRRFYA-GINGRDLASVEELIADDCV-YEDLI--FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSA 159 (194)
Q Consensus 84 ~~~~~vVr~fye-A~n~gD~dal~~L~ApD~v-~~dp~--~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~ 159 (194)
.+++++|++||+ +||++|++++.++|+||++ +++|. +++...|+++++++++.++. .+|+++++++.++++| +.
T Consensus 6 ~~~~~~v~~~~~~~~~~~d~~~~~~~~a~d~~~~~~p~~~~~g~~~G~~~~~~~~~~~~~-~~pd~~~~i~~~~~~g-d~ 83 (146)
T 3f9s_A 6 SKAKEILTQFTREVWSEGNIEASDKYIAPKYTVLHDPGDPWEGRELDVAGYKERVKTLRA-AFPDQCFDIQGLFADG-DA 83 (146)
T ss_dssp TTHHHHHHHHHHHHTTTCCGGGHHHHEEEEEEEEECTTCTTTTCEECHHHHHHHHHHHHH-HSTTCEEEEEEEEEET-TE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHcCCCeeeccCCCCCCCCCcCCHHHHHHHHHHHHh-hCCCcEEEEEEEEEeC-CE
Confidence 568999999996 9999999999999999999 88884 45688999999999998765 4799999999999998 89
Q ss_pred EEEEEEEEe-----------CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHLEW-----------KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~e~-----------~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+++|+++. .|+++.+ +++++|++ +||||+
T Consensus 84 v~~~~~~~gt~~g~~~g~~~tG~~~~~-~~~~~~~~--~dGkI~ 124 (146)
T 3f9s_A 84 VVMTWLWTATHKEDIPGFPSTGKQIKM-SGATVYYF--DGNRLT 124 (146)
T ss_dssp EEEEEEEEEECCSCBTTBCCCCCEEEE-EEEEEEEE--EETEEE
T ss_pred EEEEEEEEEEecCCCCCcCCCCCEEEE-EEEEEEEE--ECCEEE
Confidence 999887742 4899999 79999999 899996
No 8
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=99.78 E-value=1.9e-18 Score=135.51 Aligned_cols=103 Identities=15% Similarity=0.157 Sum_probs=92.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
..+++++++||++||++|++++.++|+||+++++|.. +...|+++++++++.++. .+|+++++++.++++| +.|+++
T Consensus 34 ~~n~~~v~~~~~a~~~~d~~~l~~~~a~D~v~~~p~~-g~~~G~e~~~~~~~~~~~-~~pd~~~~i~~~~~~g-d~v~~~ 110 (159)
T 3k0z_A 34 TEMVHAAQRFYAFWDTGKEELIPQTVTENFFDHTLPK-GRPQGTEGLKFAAQNFRK-IVPNIHCEIEDLLVVG-DKVTAR 110 (159)
T ss_dssp HHHHHHHHHHHHHHHHCCGGGHHHHEEEEEEESSCCT-TCCSSHHHHHHHHHHHHT-TCCSEEEEEEEEEEET-TEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHcCCCeEEecCCC-CCCCCHHHHHHHHHHHHH-hCCCcEEEEEEEEEEC-CEEEEE
Confidence 4489999999999999999999999999999999864 478999999999998765 5799999999999998 899998
Q ss_pred EEEE--eCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 164 WHLE--WKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~e--~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+++ ..|+++.+ .++++|+| +||||+
T Consensus 111 ~~~~gt~~G~~v~~-~~~~i~r~--~dGkI~ 138 (159)
T 3k0z_A 111 LSFTGTHNDKKIDF-FAIDILHV--KDGKIT 138 (159)
T ss_dssp EEEEEEETTEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEECCeEEEE-EEEEEEEE--ECCEEE
Confidence 8774 45999999 79999999 899996
No 9
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=99.78 E-value=2.2e-18 Score=128.12 Aligned_cols=102 Identities=15% Similarity=0.016 Sum_probs=87.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTW 164 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~ 164 (194)
++++++++||+|||++|++++++||+||+++++++.+....|++++++||+.++.. |++++++...+++| +.|++++
T Consensus 4 ~~~~~v~~~~~a~n~~D~~~~~~~~a~D~~~~~~~g~~~~~G~~ai~~~~~~~~~~--~~~~~~~~~~~~~g-d~v~~~~ 80 (123)
T 2k54_A 4 EIELPVQKQLEAYNARDIDAFMAWWADDCQYYAFPATLLAGNAAEIRVRHIERFKE--PDLYGELLTRVIVG-NVVIDHE 80 (123)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEETTTEEEEESHHHHHHHHHHHTTC--TTCEEEEEEEEEET-TEEEEEE
T ss_pred CHHHHHHHHHHHHHhcCHHHHHhhcCCceEEEcCCCCcccCCHHHHHHHHHHHcCC--CCcEEEEEEEEEEC-CEEEEEE
Confidence 46789999999999999999999999999999876433589999999999988764 89999999999988 8888888
Q ss_pred EEEe--CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 165 HLEW--KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 165 ~~e~--~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+... .|....+ .++++|++ +||||+
T Consensus 81 ~~~g~~~~~~~~~-~~~~vf~v--~dGkI~ 107 (123)
T 2k54_A 81 TVTRNFPEGKGEV-DVACIYEV--ENGRIA 107 (123)
T ss_dssp EEECCBTTBCCEE-EEEEEEEE--ETTEEE
T ss_pred EEEeECCCCceEE-EEEEEEEE--ECCEEE
Confidence 7754 3444467 79999999 899996
No 10
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=99.78 E-value=3.3e-18 Score=129.67 Aligned_cols=104 Identities=15% Similarity=0.236 Sum_probs=90.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC---CCCCccCHHHHH-HHHHHhhhhcCCCcEEEEEEEEecCCCe
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATL-DFFKKFSDSISSDLQFVIDDISAEDSSA 159 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~---~~g~~~Greair-~~~~~~~~~~~~d~~~~i~~via~G~d~ 159 (194)
..++++|++||++++++|++++.+||+||++|++|+ +++.+.|+++++ +||+.+... +++++++++.++++| +.
T Consensus 12 ~~~~~~v~~~~~a~~~gD~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~g-d~ 89 (140)
T 3ec9_A 12 RTPYQIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEE-WDGYTFKLDALHDAG-DT 89 (140)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEECTTSTTCEEECSHHHHHHHTHHHHHHH-EEEEEEEEEEEEEET-TE
T ss_pred chHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEEEcCCCccceEEcCHHHHHHHHHHHHHhh-CCcceeEEEEEEEcC-CE
Confidence 458999999999999999999999999999999874 346789999995 689987665 578999999999988 88
Q ss_pred EEEEEEEEe----CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHLEW----KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~e~----~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+++|++.. .|+++.+ ++|++|++ +||||+
T Consensus 90 v~v~~~~~~~~~~tG~~~~~-~~~~v~~v--~dGkI~ 123 (140)
T 3ec9_A 90 VIGVGRYSGTYRRTGKSFEC-RVAHVWRV--DAGKIV 123 (140)
T ss_dssp EEEEEEEEEEETTTCCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEEEEcCCCCEEEe-EEEEEEEE--ECCEEE
Confidence 888776643 4999999 79999999 899996
No 11
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.77 E-value=6.1e-18 Score=130.46 Aligned_cols=101 Identities=16% Similarity=0.107 Sum_probs=90.6
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTW 164 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~ 164 (194)
.+++++++||++|+++|++++.++|+||++|++| ++...|+++++++++.++.. +|++++++..++++| +.|+++|
T Consensus 5 ~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~~--~~~~~G~~~~~~~~~~~~~~-~~~~~~~i~~~~~~g-d~v~~~~ 80 (152)
T 2gex_A 5 ANKERCLEMVAAWNRWDVSGVVAHWAPDVVHYDD--EDKPVSAEEVVRRMNSAVEA-FPDLRLDVRSIVGEG-DRVMLRI 80 (152)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECT--TSCEECHHHHHHHHHHHHHH-CTTCEEEEEEEEEET-TEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEeCC--CCCCCCHHHHHHHHHHHHHh-CCCcEEEEEEEEEeC-CEEEEEE
Confidence 4789999999999999999999999999999998 45789999999999988764 689999999999988 8888887
Q ss_pred EEE-----------eCCeeEeeeceEEEEEEEeeC-CeEE
Q 029353 165 HLE-----------WKGKPFPFSKGCSFYKLEVVN-GKRQ 192 (194)
Q Consensus 165 ~~e-----------~~Gk~i~~t~g~~~fr~~~~d-GKI~ 192 (194)
+++ ..|+++.+ +++++|++ +| |||+
T Consensus 81 ~~~gt~~g~~~G~~~tG~~~~~-~~~~~~~~--~d~GkI~ 117 (152)
T 2gex_A 81 TCSATHQGVFMGIAPTGRKVRW-TYLEELRF--SEAGKVV 117 (152)
T ss_dssp EEEEECCSCBTTBCCCCCEEEE-EEEEEEEE--CTTSCEE
T ss_pred EEEEEecCCcCCcCCCCCEEEE-EEEEEEEE--ecCCEEE
Confidence 764 25899999 79999999 88 9996
No 12
>3kkg_A Putative snoal-like polyketide cyclase; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, lyase; HET: MSE PGE; 1.40A {Jannaschia SP}
Probab=99.77 E-value=3.1e-18 Score=131.13 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=91.3
Q ss_pred CcHHHHHHHHHH-HHhCCC--HHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeE
Q 029353 84 GGGAVVVRRFYA-GINGRD--LASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAV 160 (194)
Q Consensus 84 ~~~~~vVr~fye-A~n~gD--~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~V 160 (194)
.+|+++|++||+ +||++| ++++.++|+||+++++++. +...|+++++++++.++. .+|+++++++.++++| +.|
T Consensus 9 ~~n~~~v~~~~~~~~~~~d~~~~~~~~~~a~d~~~~~~~~-~~~~G~~~~~~~~~~~~~-~~pd~~~~i~~~~~~g-d~v 85 (146)
T 3kkg_A 9 TQNVETVLRLFDEGWGAQDGWRDVWRETMTPGFRSIFHSN-QAVEGIEQAIAFNAVLFE-GFPRLEVVVENVTVEG-DNV 85 (146)
T ss_dssp -CHHHHHHGGGTTTSTTSTTHHHHHHHHEEEEEEEEETTS-CCEESHHHHHHHHHHHHH-HSTTCEEEEEEEEEET-TEE
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHcCCCeEEecCCC-CCCCCHHHHHHHHHHHHH-hCCCceeEEEEEEEeC-CEE
Confidence 458999999999 999999 9999999999999996554 688999999999998765 4799999999999998 899
Q ss_pred EEEEEEEe-----------CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 161 GVTWHLEW-----------KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 161 av~~~~e~-----------~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+++|++.. .|+++.+ .++++|+| +||||+
T Consensus 86 ~~~~~~~gt~~g~~~g~~~tG~~~~~-~~~~~~~~--~dGkI~ 125 (146)
T 3kkg_A 86 VVQARLTGAQDGPFLGVPPSGQMVDV-PDVTLFTL--ADGQVI 125 (146)
T ss_dssp EEEEEEEEECCSCBTTBCCCCCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEEecCccCCcCCCCCEEEE-EEEEEEEE--ECCEEE
Confidence 99887632 4899999 79999999 899996
No 13
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=99.77 E-value=1.1e-18 Score=131.13 Aligned_cols=104 Identities=14% Similarity=0.057 Sum_probs=90.4
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC---CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAV 160 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~---~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~V 160 (194)
.+++++|++||++|+++|++++.+|++||++|++|. +++++.|+++++++|+.++.. ++++++++..++++| +.|
T Consensus 5 ~~~~~~v~~~~~a~~~~d~~~~~~l~a~D~~~~~p~~~p~~g~~~G~~~i~~~~~~~~~~-~~~~~~~~~~~~~~g-d~v 82 (135)
T 3fgy_A 5 QENVQIVKDFFAAMGRGDKKGLLAVSAEDIEWIIPGEWPLAGTHRGHAALAALLQKASEM-VEISYPEPPEFVAQG-ERV 82 (135)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEEECSSSTTCEEEEHHHHHHHHHHHHHHH-EEEECSSCCEEEEET-TEE
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEEEcCCCccceEEeCHHHHHHHHHHHHHh-hCcceeeeEEEEEcC-CEE
Confidence 568999999999999999999999999999999875 345789999999999988765 477778888888888 888
Q ss_pred EEEEEEEe----CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 161 GVTWHLEW----KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 161 av~~~~e~----~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+++|++.. .|+++.+ ++|++|++ +||||+
T Consensus 83 ~v~~~~~~~~~~~G~~~~~-~~~~~~~~--~dGkI~ 115 (135)
T 3fgy_A 83 LVVGFATGRVKSTNRTFED-DWVFAITV--RKSKVT 115 (135)
T ss_dssp EEEEEEEEEETTTCCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEeEEEcCCCCEecc-cEEEEEEE--ECCEEE
Confidence 88776642 6999999 79999999 899996
No 14
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=99.76 E-value=4.9e-18 Score=134.85 Aligned_cols=105 Identities=14% Similarity=0.217 Sum_probs=90.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCC--CCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEec--CCCe
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF--PRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAE--DSSA 159 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~--~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~--G~d~ 159 (194)
+.++++|++||++||++|+++|++||+|||++|.|+. ++++.|+++++++|+.++... +.+++++.++++ | +.
T Consensus 10 ~~~~~~v~ry~~A~n~gD~d~l~~l~aeD~v~~~p~~~p~~~~~Greai~~~f~~~~~~~--d~~~~~e~i~v~~dG-~~ 86 (156)
T 3g16_A 10 AAMEKVIRTYYDGCNEADEAKMIACFVPEAVHYFPAGMYGGAFRGAAQIAHRWRTAVETL--GSYWTIDALVIDAET-AE 86 (156)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECBTTSTTSCEESHHHHHHHHHHHHHHH--CEEEEEEEEEEETTT-TE
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEecCCCCCCCCccCHHHHHHHHHHHHhhc--CceEEEEEEEEecCC-CE
Confidence 5589999999999999999999999999999997652 567899999999999887653 688898888877 7 78
Q ss_pred EEEEEEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+++|++...++.+.+ +++.+|+|+.+||||+
T Consensus 87 av~Ewt~~~T~~g~~~-~~~~~f~f~~~DGKI~ 118 (156)
T 3g16_A 87 AAIEWTHFKTNQDKVL-RGAECVEFDRASGLIR 118 (156)
T ss_dssp EEEEEEEEEGGGTEEE-EEEEEEEEETTTTEEE
T ss_pred EEEEEEEEEeCCCeeE-ecceEEEEEecCCEEE
Confidence 8899998765444667 7999999987789997
No 15
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=99.76 E-value=2.6e-18 Score=133.22 Aligned_cols=104 Identities=15% Similarity=0.106 Sum_probs=92.4
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCC-CcEEEEEEEEecCCCeEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISS-DLQFVIDDISAEDSSAVGV 162 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~-d~~~~i~~via~G~d~Vav 162 (194)
..++++|++||++||++|++++.++|+||+++++|..+.+..|+++++++++.++.. +| +++++++.++++| +.|++
T Consensus 11 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D~v~~~p~~~~~~~G~~~~~~~~~~~~~~-~p~d~~~~i~~~~~~g-d~v~~ 88 (153)
T 2f99_A 11 SEQIAAVRRMVEAYNTGKTDDVADYIHPEYMNPGTLEFTSLRGPELFAINVAWVKKT-FSEEARLEEVGIEERA-DWVRA 88 (153)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGTTTCCCCHHHHHHHHHHHHHHH-HCTTCEEEEEEEEEET-TEEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHHHH-CCCCcEEEEEEEEEeC-CEEEE
Confidence 458999999999999999999999999999999987654468999999999988765 57 9999999999998 89999
Q ss_pred EEEEEe-----------CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 163 TWHLEW-----------KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 ~~~~e~-----------~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+|++.. .|+++.+ .++++|++ +||||+
T Consensus 89 ~~~~~gt~~g~~~g~~~tG~~~~~-~~~~~~~v--~dGkI~ 126 (153)
T 2f99_A 89 RLVLYGRHVGEMVGMAPTGRLFSG-EQIHLLHF--VDGKIH 126 (153)
T ss_dssp EEEEEEECCSCBTTBCCCCCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEecCCCCCcCCCCCEEEE-EEEEEEEE--ECCEEE
Confidence 887742 4899999 79999999 899996
No 16
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=99.76 E-value=1.4e-17 Score=128.72 Aligned_cols=107 Identities=15% Similarity=0.202 Sum_probs=89.6
Q ss_pred CCCCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCC---CCCccCHHHHHHHHHHhhhhcCC-CcEEEE-EEEEec
Q 029353 81 GDDGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF---PRPFLGRKATLDFFKKFSDSISS-DLQFVI-DDISAE 155 (194)
Q Consensus 81 ~~~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~---~g~~~Greair~~~~~~~~~~~~-d~~~~i-~~via~ 155 (194)
.....++++|++||++++++|++++.+||+||++|++|.. ++++.|++++++++..++... + .++++. ..++++
T Consensus 17 ~~~~~n~~~v~~~~~a~~~gD~~~l~~l~a~D~v~~~p~~~~~~g~~~G~~~v~~~~~~~~~~~-~~~~~~~~i~~~~~~ 95 (148)
T 3g8z_A 17 FQGMNTIDIAKSYITAIQTGDHATLGSIISPDVIWHQPGNHQFSGTHRGMAVVGPMLGKMMEVS-NGTFAISRADDYMAS 95 (148)
T ss_dssp ---CCHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHHHHHT-TTCCEEEEEEEEEEE
T ss_pred cCCcchHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEcCCCCCCCceEcCHHHHHHHHHHHHHhc-CCceEEEecceEEec
Confidence 3446789999999999999999999999999999998853 346799999999999887664 5 478874 778888
Q ss_pred CCCeEEEEEEE--EeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 156 DSSAVGVTWHL--EWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 156 G~d~Vav~~~~--e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
| +.|+++|++ ...|+++.+ .++++|+| +||||+
T Consensus 96 g-d~v~v~~~~~~~~~G~~~~~-~~~~v~~~--~dGkI~ 130 (148)
T 3g8z_A 96 G-DWVAITLEFSGQANGVTLKQ-AGVDLLRI--EDGKIV 130 (148)
T ss_dssp T-TEEEEEEEEEEEETTEEEEE-EEEEEEEE--ETTEEE
T ss_pred C-CEEEEEEEEEEEeCCcEEEe-eEEEEEEE--ECCEEE
Confidence 8 888886665 457999999 79999999 899996
No 17
>1sjw_A Nogalonic acid methyl ester cyclase; anthracyclines, nogalamycin, snoal, aldol condensation, LYAS structural genomics; HET: NGV; 1.35A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=99.75 E-value=3.5e-18 Score=129.68 Aligned_cols=103 Identities=18% Similarity=0.164 Sum_probs=90.8
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCC-CcEEEEEEEEecCCCeEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISS-DLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~-d~~~~i~~via~G~d~Vav~ 163 (194)
++++++++||++|+++|++++.++|+||+++++|..+....|+++++++++.++.. +| +++++++.++++| +.|+++
T Consensus 3 ~~~~~v~~~~~a~~~~d~~~~~~~~a~d~~~~~~~~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~g-d~v~~~ 80 (144)
T 1sjw_A 3 RQTEIVRRMVSAFNTGRTDDVDEYIHPDYLNPATLEHGIHTGPKAFAQLVGWVRAT-FSEEARLEEVRIEERG-PWVKAY 80 (144)
T ss_dssp HHHHHHHHHHHHHHHCCCTTGGGTEEEEEECGGGGGGTCCSHHHHHHHHHHHHHHH-HCTTCEEEEEEEEEET-TEEEEE
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHHcCcCeEEccCCCCCCCCCHHHHHHHHHHHHHh-CCCCcEEEEEEEEEeC-CEEEEE
Confidence 57899999999999999999999999999999987543348999999999987765 58 9999999999988 889888
Q ss_pred EEEEe-----------CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 164 WHLEW-----------KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~e~-----------~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|++.. .|+++.+ .++++|++ +||||+
T Consensus 81 ~~~~gt~~g~~~G~~~tG~~~~~-~~~~~~~~--~dGkI~ 117 (144)
T 1sjw_A 81 LVLYGRHVGRLVGMPPTDRRFSG-EQVHLMRI--VDGKIR 117 (144)
T ss_dssp EEEEEECCSCBTTBCCCCCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEecCCCCCcCCCCCEEEE-EEEEEEEE--ECCEEE
Confidence 87632 4899999 79999999 899996
No 18
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=6.1e-18 Score=126.76 Aligned_cols=98 Identities=13% Similarity=0.214 Sum_probs=88.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTW 164 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~ 164 (194)
++++++++||++||++|++++.++++||+++++ ...|+++++++++.++. .+|+++++++.++++| +.|+++|
T Consensus 4 ~~~~~v~~~~~~~~~~d~~~~~~~~a~d~~~~~-----~~~G~~~~~~~~~~~~~-~~pd~~~~i~~~~~~g-d~v~~~~ 76 (128)
T 3ehc_A 4 TLNDIYLAYLDSLNHQAFDELGTFVDDNVEHNG-----RPFGLSGYRDMLVKDFA-DIPDLRFEAEILVSDA-TRLAARL 76 (128)
T ss_dssp CHHHHHHHHHHHHHTTCGGGGGGTEEEEEEETT-----BCCHHHHHHHHHHHHHH-HCTTCCCCEEEEEECS-SEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCcceEeCC-----CCCCHHHHHHHHHHHHh-hCCCceEEEEEEEEEC-CEEEEEE
Confidence 589999999999999999999999999999974 46799999999998775 4799999999999988 8999988
Q ss_pred EEEe-----------CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 165 HLEW-----------KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 165 ~~e~-----------~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+++. .|+++.+ .++++|++ +||||+
T Consensus 77 ~~~gt~~g~~~g~~~tG~~~~~-~~~~~~~~--~dGkI~ 112 (128)
T 3ehc_A 77 FFDCTPKSIFMDLPVNGRRVQF-CEHVFYDF--EQAKIR 112 (128)
T ss_dssp EEEECCSSEETTEECTTCCEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEcCcccCCCCCCCEEEE-EEEEEEEE--eCCEEE
Confidence 8743 4899999 79999999 899996
No 19
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=99.74 E-value=3.2e-17 Score=127.53 Aligned_cols=100 Identities=17% Similarity=0.173 Sum_probs=89.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTW 164 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~ 164 (194)
++++++++||++|+++|++++.++|+||+++++| +...|+++++++++.++.. +|++++++..++++| +.|+++|
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D~v~~~p---~~~~G~~~~~~~~~~~~~~-~~~~~~~i~~~~~~g-d~v~~~~ 79 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPDIVHYSE---DNEVSSADMVKLMEGGLKA-FPDLQLEVKSIMAEE-DRVALRI 79 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEEEEEEET---TEEECHHHHHHHHHHHHHH-STTCEEEEEEEEEET-TEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCCeEEeCC---CCCCCHHHHHHHHHHHHHh-CCCcEEEEEEEEEeC-CEEEEEE
Confidence 5789999999999999999999999999999995 3689999999999987764 689999999999988 8999988
Q ss_pred EEEe-----------CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 165 HLEW-----------KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 165 ~~e~-----------~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+++. .|+++.+ .++++|++ +||||+
T Consensus 80 ~~~gt~~g~~~G~~~tG~~~~~-~~~~~~~~--~dGkI~ 115 (158)
T 2gey_A 80 TVTATHQGEFMGVQPTGQRVSW-HLVEELRF--VDGKVV 115 (158)
T ss_dssp EEEEECCSCBTTBCCCCCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEecCCCCCcCCCCCEEEE-EEEEEEEE--ECCEEE
Confidence 7642 4889999 79999999 899996
No 20
>3grd_A Uncharacterized NTF2-superfamily protein; NP_977240.1, NTF2-superfamily protein with unknown function, structural genomics; HET: MSE; 1.25A {Bacillus cereus atcc 10987} SCOP: d.17.4.0
Probab=99.74 E-value=2.5e-18 Score=129.22 Aligned_cols=104 Identities=14% Similarity=0.278 Sum_probs=88.7
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC---CCCCccCHHHHH-HHHHHhhhhcCCCcEEEEEEE--EecCC
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FPRPFLGRKATL-DFFKKFSDSISSDLQFVIDDI--SAEDS 157 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~---~~g~~~Greair-~~~~~~~~~~~~d~~~~i~~v--ia~G~ 157 (194)
.+++++|++||++++++|++++.+|++||++|++|+ +++++.|+++++ ++|+.+... +++++++++.+ +++|
T Consensus 4 ~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~p~~g~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g- 81 (134)
T 3grd_A 4 KANLEIIRSTYEGSASSNAKHLAEALSEKVEWTEAEGFPYGGTYIGVEAIMENVFSRLGSE-WNDYKASVNMYHEVSGK- 81 (134)
T ss_dssp CCHHHHHHTTTSSCHHHHHHHHHHHEEEEEEEEECTTSTTCEEEESHHHHHHHTHHHHHHH-EEEEEEEEEEEEEBTTS-
T ss_pred chHHHHHHHHHHHHhcCCHHHHHHhcCCCeEEEecCCcccCcEEeCHHHHHHHHHHHHHhh-ccccccchhheeeecCC-
Confidence 468999999999999999999999999999999874 346789999998 488877654 57889988877 7777
Q ss_pred CeEEEEEEEEe----CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 158 SAVGVTWHLEW----KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 158 d~Vav~~~~e~----~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.|++++++.. .|+++.+ ++|++|++ +||||+
T Consensus 82 d~v~v~~~~~~~~~~tG~~~~~-~~~~v~~~--~dGkI~ 117 (134)
T 3grd_A 82 DVIIAEGMYSGVYKDTGKSFEA-EFVHVWQL--ENGKIV 117 (134)
T ss_dssp SEEEEEEEEEEEETTTCCEEEE-EEEEEEEE--ETTEEE
T ss_pred CEEEEEEEEeeEECCCCCEeee-eEEEEEEE--ECCEEE
Confidence 88888666542 5999999 79999999 899996
No 21
>3hk4_A MLR7391 protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, lyase; HET: MSE; 1.96A {Mesorhizobium loti}
Probab=99.73 E-value=4.6e-17 Score=125.86 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=90.0
Q ss_pred CCCCcHHHHHHHHHHHHhCCCH-HHHHhhhcCCeEEEcCCCC--CCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCC
Q 029353 81 GDDGGGAVVVRRFYAGINGRDL-ASVEELIADDCVYEDLIFP--RPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDS 157 (194)
Q Consensus 81 ~~~~~~~~vVr~fyeA~n~gD~-dal~~L~ApD~v~~dp~~~--g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~ 157 (194)
....++++++++|+++++++|. +++.+||||||++++|..+ +...|+++++++++.+. ..++...+++++++++|
T Consensus 17 ~~~~~~kevv~r~~e~~~~gd~~~~l~~lya~D~v~~dp~~~~~~~~~G~eai~~~~~~~~-~~~~~~~~~i~~~~v~g- 94 (136)
T 3hk4_A 17 FQGMTIAEIAKDFTELLKQGDNAGAAEKYNADDIASYEAMEGPMAVSHGKEALRQKSQWWQ-ENHEVHGGSVEGPYVNG- 94 (136)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHEEEEEEEECSSCSTTSEEESHHHHHHHHHHHH-HTEEEEEEEEEEEEEET-
T ss_pred hccccHHHHHHHHHHHHHcCCcHHHHHHHCCCCEEEEcCCCCCccccCCHHHHHHHHHHHH-hcCCeeeeeecceEEcC-
Confidence 3456789999999999999996 6799999999999998542 25899999999998554 44566678888888888
Q ss_pred CeEEEEEEEEe----CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 158 SAVGVTWHLEW----KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 158 d~Vav~~~~e~----~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.|+++|++.+ .|+++.+ .++++|+| +||||+
T Consensus 95 d~v~v~~~~~gth~~tG~~i~~-~~i~v~rv--~DGkIv 130 (136)
T 3hk4_A 95 DQFALRFKFDVTPKATGERVTM-DEVGLYTV--KNGKIT 130 (136)
T ss_dssp TEEEEEEEEEEEETTTCCCEEE-EEEEEEEE--ETTEEE
T ss_pred CEEEEEEEEEEEECCCCcEEEE-EEEEEEEE--ECCEEE
Confidence 89999998854 4999999 79999999 899996
No 22
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=99.72 E-value=1e-16 Score=121.11 Aligned_cols=105 Identities=18% Similarity=0.225 Sum_probs=87.6
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCC-------ccCHHHHHHHHHHhhhhcCCCcEEEEEEEE--
Q 029353 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRP-------FLGRKATLDFFKKFSDSISSDLQFVIDDIS-- 153 (194)
Q Consensus 83 ~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~-------~~Greair~~~~~~~~~~~~d~~~~i~~vi-- 153 (194)
...+++++++||++||++|++++.+||+||+++++|..+.+ ++|+++++++|+.++.. + ++++++....
T Consensus 6 ~~~~~~~v~~~~~a~~~~D~~~~~~l~a~D~v~~~p~~~~~~~~~g~~~~G~~ai~~~~~~~~~~-~-~~~~~~~~~~i~ 83 (139)
T 2a15_A 6 QSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAA-N-RLTVTCEETFPS 83 (139)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEESSSSSBTTBTTSSCEESHHHHHHHHHHHTTT-T-TCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEECCCCCCccCCCCceeecHHHHHHHHHHhccc-c-eeEEeccCceEe
Confidence 45688999999999999999999999999999999865434 79999999999988765 4 7888876433
Q ss_pred ecCCCeEEEEEEEEe---CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 154 AEDSSAVGVTWHLEW---KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 154 a~G~d~Vav~~~~e~---~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
.+| +.|+++|+++. .|+++.+ +++++|+++. ||||+
T Consensus 84 ~~g-~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~-dGkI~ 122 (139)
T 2a15_A 84 SSP-DEIAHILVLHSEFDGGFTSEV-RGVFTYRVNK-AGLIT 122 (139)
T ss_dssp SST-TEEEEEEEEEEEETTTEEEEE-EEEEEEEECT-TSCEE
T ss_pred ecC-CEEEEEEEEEEEeCCCCEEEE-EEEEEEEECC-CCeEE
Confidence 566 88888888743 5999999 8999999942 79996
No 23
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=99.72 E-value=2.3e-17 Score=122.63 Aligned_cols=105 Identities=16% Similarity=0.305 Sum_probs=90.6
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeE-EE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAV-GV 162 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~V-av 162 (194)
..+++++++|+++|+++|++++.+||+||++|++|..+.++.|+++++++++.++.. ++++++++..+..+| +.+ ++
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~~~~G~~~i~~~~~~~~~~-~~~~~~~~~~~~~~g-~~~~~~ 84 (131)
T 1oh0_A 7 QEVQGLMARYIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQGLGG-GKVRACLTGPVRASH-NGCGAM 84 (131)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEESSTTSCCEEHHHHHHHHHHHHHSS-SCCEEEESSCCEECS-SSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHcCCCEEEEcCCCCCCcccHHHHHHHHHHHhhc-cceeEeecceEEECC-CeEEEE
Confidence 357889999999999999999999999999999986555899999999999988764 578888888888887 777 77
Q ss_pred EEEEEe--CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 163 TWHLEW--KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 ~~~~e~--~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+|++.. .|+++.+ .++++|+++ +||||+
T Consensus 85 ~~~~~~~~~G~~~~~-~~~~~~~~~-~dGkI~ 114 (131)
T 1oh0_A 85 PFRVEMVWNGQPCAL-DVIDVMRFD-EHGRIQ 114 (131)
T ss_dssp EEEEEEESSSSEEEE-EEEEEEEEC-TTSCEE
T ss_pred EEEEEEEeCCcEEEE-EEEEEEEEC-CCCcEE
Confidence 787654 6999999 799999997 489986
No 24
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=99.72 E-value=8.3e-17 Score=117.25 Aligned_cols=102 Identities=20% Similarity=0.321 Sum_probs=87.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEE-EEEecCCCeEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVID-DISAEDSSAVGVT 163 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~-~via~G~d~Vav~ 163 (194)
.+++++++|+++|+++|++++.++|+||++|++|..++++.|+++++++++.++.. ++ .+++. .++.+| +.|+++
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~~~~~~~~~G~~~i~~~~~~~~~~-~~--~~~~~~~~~~~g-~~~~~~ 81 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDATVENPVGSEPRSGTAAIREFYANSLKL-PL--AVELTQEVRAVA-NEAAFA 81 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEESSTTSCCEESHHHHHHHHHHHTSS-CC--EEEECSCCEEET-TEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCeEEECCCCCCCccCHHHHHHHHHHhccc-Cc--eEEEeeeEEEeC-CEEEEE
Confidence 47889999999999999999999999999999986666899999999999988754 45 56676 777777 888887
Q ss_pred EEEEe--CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 164 WHLEW--KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~e~--~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+... .|+++.+ +++++|+++ +||||+
T Consensus 82 ~~~~~~~~g~~~~~-~~~~~~~~~-~dGkI~ 110 (125)
T 1ohp_A 82 FIVSFEYQGRKTVV-APIDHFRFN-GAGKVV 110 (125)
T ss_dssp EEEEEEETTEEEEE-CCEEEEEEC-TTSCEE
T ss_pred EEEEEEecCceEEE-EEEEEEEEC-CCCcEE
Confidence 77654 7999999 899999993 289986
No 25
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=99.71 E-value=2.3e-16 Score=120.45 Aligned_cols=102 Identities=20% Similarity=0.274 Sum_probs=88.4
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCc-EEEEEEEEecCCCeEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDL-QFVIDDISAEDSSAVGV 162 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~-~~~i~~via~G~d~Vav 162 (194)
.++++++++||++|+++|++++.++|+||++|++|+. +++.|+++++++++.++... + + ++++..++++| +.|++
T Consensus 22 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~~~~-~~~~G~~~i~~~~~~~~~~~-~-~~~~~~~~~~~~g-d~v~~ 97 (149)
T 1nww_A 22 TPDEKIVLEFMDALTSNDAAKLIEYFAEDTMYQNMPL-PPAYGRDAVEQTLAGLFTVM-S-IDAVETFHIGSSN-GLVYT 97 (149)
T ss_dssp SHHHHHHHHHHHHGGGCCHHHHHTTBCSSCEEEETTS-CCEESHHHHHHHHHHHHHHE-E-EEEEEEEEEEEET-TEEEE
T ss_pred cCHHHHHHHHHHHHhcCCHHHHHHHhCCCEEEEcCCC-CCccCHHHHHHHHHHHHhhC-C-cceEEEEEEEecC-CEEEE
Confidence 4588999999999999999999999999999999865 46899999999999887654 5 7 88888888888 78777
Q ss_pred EEEEE--e--CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 163 TWHLE--W--KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 ~~~~e--~--~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
++... . .|+.+.+ .++++|++ +||||+
T Consensus 98 ~~~~~~~~~~~G~~~~~-~~~~~~~~--~dGkI~ 128 (149)
T 1nww_A 98 ERVDVLRALPTGKSYNL-SILGVFQL--TEGKIT 128 (149)
T ss_dssp EEEEEEEETTTCCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEcCCCCEEEE-eeEEEEEE--eCCEEE
Confidence 66653 3 5999999 79999999 899997
No 26
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=99.71 E-value=6.9e-17 Score=121.75 Aligned_cols=102 Identities=20% Similarity=0.356 Sum_probs=81.6
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE--ecCCCeEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSAVG 161 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi--a~G~d~Va 161 (194)
++++++|++||++|+++|++++.++|+||++|+.|. ++++.|+++++++++.+... ++. .+....+. ++| +.|+
T Consensus 8 m~~~~~v~~~~~a~~~~D~~~~~~l~a~D~~~~~p~-~~~~~G~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g-d~v~ 83 (140)
T 3i0y_A 8 QRATGLVQAYYEAFNRGDWDAMLAFLAEDVAHDLNQ-GPREIGRAAFASFLQRMNDS-YRE-QLRDIVVTANDEG-TRVG 83 (140)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTT-SCEEESHHHHHHHHHHHHHH-EEE-EEEEEEEEECTTS-SEEE
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHcCCcEEEEcCC-CCceEcHHHHHHHHHHHhhh-cch-hhhheeeeecccC-CEEE
Confidence 567899999999999999999999999999998775 45799999999999986554 222 22222222 455 8888
Q ss_pred EEEEEE------------eCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 162 VTWHLE------------WKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 162 v~~~~e------------~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
++|.++ ..|+++.+ ++|++|+| +||||+
T Consensus 84 ~~~~~~gt~~g~~~g~p~~tG~~~~~-~~~~~~~~--~dGkI~ 123 (140)
T 3i0y_A 84 AEYVVHGVYHTTDEGLPDANGQTYVL-PGGAFFDV--RDGQIT 123 (140)
T ss_dssp EEEEEEEEECSCCTTSSCCSCEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEeecccCCCcCCCCCEEEE-EeeEEEEE--ECCEEE
Confidence 888762 35899999 89999999 899996
No 27
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=99.70 E-value=1.5e-16 Score=122.32 Aligned_cols=102 Identities=21% Similarity=0.359 Sum_probs=87.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
.++++++++||++|+++|++++.+||+||++|++++. +++.|+++++++++.++.. + ++++++..++++| +.|+++
T Consensus 15 ~~~~~~v~~f~~a~~~gD~~~l~~l~a~D~v~~~~~~-~~~~G~~~i~~~~~~~~~~-~-~~~~~i~~~~~~g-~~vv~~ 90 (149)
T 2bng_A 15 TEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGF-SRIRGGRRTATLLRRMQGR-V-GFEVKIHRIGADG-AAVLTE 90 (149)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTT-EEEECHHHHHHHHHTTTTT-C-EEEEEEEEEEEET-TEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHcCCCEEEEeCCC-CCccCHHHHHHHHHHHHhh-c-CcEEEEEEEEEeC-CEEEEE
Confidence 3578999999999999999999999999999997664 4689999999999976543 4 6888998998888 777776
Q ss_pred EE--EEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 164 WH--LEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~--~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+. ...+|+.+.+ .++++|++ +||||+
T Consensus 91 ~~~~~~~~G~~~~~-~~~~~~~v--~dGkI~ 118 (149)
T 2bng_A 91 RTDALIIGPLRVQF-WVCGVFEV--DDGRIT 118 (149)
T ss_dssp EEEEEEETTEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEECCeEEEE-EEEEEEEE--ECCEEE
Confidence 55 4457999999 79999999 899997
No 28
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=99.69 E-value=2.6e-16 Score=120.39 Aligned_cols=103 Identities=15% Similarity=0.261 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCC--CCccCHHHHHHHHHHhhhhcCCCcEEE-EEEEEecCCCeEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFP--RPFLGRKATLDFFKKFSDSISSDLQFV-IDDISAEDSSAVGV 162 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~--g~~~Greair~~~~~~~~~~~~d~~~~-i~~via~G~d~Vav 162 (194)
.++++++|++|+++||++++.+|++||++|+.|..+ +++.|++++++|+..+.....+.++++ ++.++++| +.|++
T Consensus 14 ~~~~~~~f~~A~~~gD~~~l~~lla~D~v~~~pg~~~~g~~~G~~~v~~~~~~~~~~~~~~~~~~~v~~~~~~G-~~vvv 92 (134)
T 3dmc_A 14 AHQGFEFFTQGLATGEWQKFLDMLTEDFTFWFPMGEFHGLNVGKERAKEFFTYVSESFHTGIQISSLDRVTSNE-TTVVF 92 (134)
T ss_dssp HHHHHHHHHHHHHHSCCHHHHTTEEEEEEEEESSGGGBEEEESHHHHHHHHHHHHHTCTTCEEEEEEEEEEECS-SEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCCEEEEecCCCCCccchhHHHHHHHHHHHHHhhcCCceeEEEEEEEecC-CEEEE
Confidence 456778899999999999999999999999987642 578999999999998776543467888 88888888 78777
Q ss_pred EEEE--EeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 163 TWHL--EWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 ~~~~--e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+++. ...|+++.. ..|.+|++ +||||+
T Consensus 93 e~~~~g~~~g~~y~~-~~~~~f~v--~dGkI~ 121 (134)
T 3dmc_A 93 EFRDEGLFLGKPYKN-RVAVSFDV--RGDKIC 121 (134)
T ss_dssp EEEEEEEETTEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEcCcEeec-cEEEEEEE--ECCEEE
Confidence 6654 567999999 79999999 899996
No 29
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=99.69 E-value=8.4e-17 Score=122.37 Aligned_cols=103 Identities=21% Similarity=0.282 Sum_probs=85.9
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC----CCCCccCHHHHHHHHHHhhhhcCCCcEE--EEEEEEecCCC
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI----FPRPFLGRKATLDFFKKFSDSISSDLQF--VIDDISAEDSS 158 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~----~~g~~~Greair~~~~~~~~~~~~d~~~--~i~~via~G~d 158 (194)
++++++++||++|+++|++++.+||+||++|++|. .+.++.|+++++++++.++.. ++++++ .+..++.+| +
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~~~~~p~~~~g~~~~~~G~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g-d 88 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDENAVFEFPYAPEGSPKRIEGKAAIYDYIKDYPKQ-IHLSSFTAPTVYRSADS-N 88 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTCCTTSCSEEESHHHHHHHHTTHHHH-EEEEEECCCEEEEBSSS-S
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCCEEEEeecCCCCCCccccCHHHHHHHHHHhhhc-CCcccceeEEEEEecCC-C
Confidence 68899999999999999999999999999999873 222589999999999987765 466666 444556666 8
Q ss_pred eEEEEEEEEe----CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 159 AVGVTWHLEW----KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 159 ~Vav~~~~e~----~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
.|+++|+... .|+++.+ +++++|++ +||||+
T Consensus 89 ~v~~~~~~~~~~~~~G~~~~~-~~~~~~~~--~dGkI~ 123 (150)
T 1s5a_A 89 TVIAEFQCDGHVIETGLPYRQ-SYISVIET--RDGRIV 123 (150)
T ss_dssp EEEEEEEEEEEETTTCCBCCC-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEEEEEcCCCCEEEE-EEEEEEEE--eCCEEE
Confidence 8888888753 6998989 79999999 899997
No 30
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=99.69 E-value=1.4e-16 Score=124.14 Aligned_cols=99 Identities=16% Similarity=0.142 Sum_probs=86.7
Q ss_pred CcHHHHHHHHHH-HHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEE
Q 029353 84 GGGAVVVRRFYA-GINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGV 162 (194)
Q Consensus 84 ~~~~~vVr~fye-A~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav 162 (194)
..++++|++||+ +|+++|++++.++++||+++++|.. ..|+++++++++.++. .+|+++++++.++++| +.|++
T Consensus 27 ~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~v~h~P~~---~~G~e~~~~~~~~~~~-~~pd~~~~i~~iiaeG-D~V~~ 101 (148)
T 3g0k_A 27 QANHDLVIEMYNKVLIAMDSSAVDRYIAPGYVQHSSLA---EPSVEALKGFLDRVRA-ESPDARQTIHRSFVDG-DHVIT 101 (148)
T ss_dssp HHHHHHHHHHHHHTTTTTCGGGGGGTEEEEEEECCSSS---CSSHHHHHHHHHHHHH-HCCSCEEEEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCcCeEEcCCCC---CCCHHHHHHHHHHHHH-hCCCceEEEEEEEEEC-CEEEE
Confidence 358999999999 9999999999999999999999754 4899999999998765 4699999999999998 99999
Q ss_pred EEEEEe--CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 163 TWHLEW--KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 ~~~~e~--~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+|++.. .|+ .+ .++++||| +||||+
T Consensus 102 ~~~~~~~~~g~--~~-~~~difr~--~dGkIv 128 (148)
T 3g0k_A 102 HTHVERWPGDA--GL-AVVDIFRV--EGGMIV 128 (148)
T ss_dssp EEEEECSTTCC--CE-EEEEEEEE--ETTEEE
T ss_pred EEEEEECCCCc--cE-EEEEEEEE--ECCEEE
Confidence 998753 354 45 68999999 899996
No 31
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=99.69 E-value=3.4e-16 Score=118.90 Aligned_cols=100 Identities=15% Similarity=0.211 Sum_probs=84.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
.+++++|++||++++++|++++.+||+||+++++|..+.++.|++++++++..+-. ....++++.+.++| +.|+++
T Consensus 5 ~~~~~~v~~~~~a~~~~D~~~l~~llaeD~v~~~P~~~~~~~Gr~~~~~~~~~~~~---~~~~~~i~~~~a~G-~~vv~~ 80 (128)
T 3en8_A 5 EKIREALNAHWQASAAGDFDAEHDIYDDDAICDYPQSGERILGRMNLQALRSHHPG---KPAGFEVRRIQGEG-NLWITE 80 (128)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHTTTEEEEEEEEETTTTEEEESHHHHHHHHHHTTC---SCSEEEEEEEEEET-TEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCCCCEEECHHHHHHHHHHCCC---CCcceEEEEEEECC-CEEEEE
Confidence 45789999999999999999999999999999999877788999999998874321 11238888899998 888888
Q ss_pred EEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 164 WHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
++....|. .+ .+|++|+| +||||+
T Consensus 81 ~~~~~~g~--~~-~~~~v~~v--~dGkI~ 104 (128)
T 3en8_A 81 YSISYNGR--PA-YTVSIMEF--RNGKVV 104 (128)
T ss_dssp EEEEETTE--EE-EEEEEEEE--ETTEEE
T ss_pred EEEecCCE--EE-EEEEEEEE--cCCEEE
Confidence 88876674 55 68999999 899996
No 32
>3f8h_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 2.00A {Silicibacter SP}
Probab=99.68 E-value=1.1e-16 Score=124.45 Aligned_cols=103 Identities=12% Similarity=0.208 Sum_probs=82.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE-ecCCCeEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDSSAVGV 162 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi-a~G~d~Vav 162 (194)
.+++++|++||++||++|++++.+||+||++++ ++.++++.|++++++|++.++.. +++...++..++ ++| +.|++
T Consensus 18 ~~~~~~v~~~~~a~n~~D~~~l~~l~a~D~v~~-~~~~~~~~G~e~i~~~~~~~~~~-~~~~~~~~~~~~~~~g-d~v~~ 94 (150)
T 3f8h_A 18 QGMNDTIARYFDAFNAGDTDGMLACLSEDVAHH-VNEGNIRVGKEKFAAFCAHMSHC-YKEELTDMVIFATPDA-TRAAA 94 (150)
T ss_dssp ECCCCHHHHHHHHHHHTCHHHHHTTEEEEEEEE-EETTEEEESHHHHHHHHHHHHHH-EEEEEEEEEEEECTTS-SEEEE
T ss_pred hhHHHHHHHHHHHHHccCHHHHHHHcCCCeEEe-CCCCcceeCHHHHHHHHHHHHHh-CCccccceEEEEecCC-CEEEE
Confidence 346789999999999999999999999999954 33455789999999999987765 465333333333 345 89998
Q ss_pred EEEEE------------eCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 163 TWHLE------------WKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 ~~~~e------------~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+|.+. ..|+++.+ ++|++|+| +||||+
T Consensus 95 ~~~~~gt~~g~~~G~p~~tG~~v~~-~~~~~~~~--~dGkI~ 133 (150)
T 3f8h_A 95 EYTVNGTYLATDEGLPEARQQSYKL-PAGSFFDL--RDGLIT 133 (150)
T ss_dssp EEEEEEEECSCCTTSCCCSSEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEecCCCCCcCCCCCEEEE-eeeEEEEE--eCCEEE
Confidence 88763 35899999 79999999 899996
No 33
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=99.68 E-value=3.4e-16 Score=121.64 Aligned_cols=100 Identities=18% Similarity=0.316 Sum_probs=82.7
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE----ecCCCe
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS----AEDSSA 159 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi----a~G~d~ 159 (194)
...+++|++||++|+++|++++.+||+||++|+.|.. +++.|+++++++++.++... +..+..++ ++| +.
T Consensus 20 ~~~~~lv~~~~~a~~~~D~~~l~~l~a~D~v~~~p~g-~~~~G~e~i~~~~~~~~~~~----~~~~~~~~~~~~~~g-d~ 93 (151)
T 3f7x_A 20 MTATELVNAYYAAFNAGDMPAFLALLSEDVIHDINQG-ERQMGKARFAAFMEKMNRCY----RERLADIVVMQNADG-SR 93 (151)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECTTS-CEEESHHHHHHHHHHHHHHE----EEEEEEEEEEECTTS-SE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEECCCC-CCcCCHHHHHHHHHHHHHhh----ccceeEEEEEEecCC-CE
Confidence 5578999999999999999999999999999976543 57999999999999876543 34444443 556 88
Q ss_pred EEEEEEEE------------eCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHLE------------WKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~e------------~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+++|.+. ..|+++.+ +++++|+| +||||+
T Consensus 94 v~~~~~~~gt~~g~~~G~p~~tG~~~~~-~~~~~~~~--~dGkI~ 135 (151)
T 3f7x_A 94 AAAEFTVHGQYLADDEGLPTANGQTYVL-PAGAFFYI--HCGKIA 135 (151)
T ss_dssp EEEEEEEEEEECSCCTTSCCCSSCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEEEEeccCCCCcCCCCCEEEE-EEEEEEEE--ECCEEE
Confidence 88877763 35899999 79999999 899996
No 34
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=99.67 E-value=2.9e-16 Score=121.77 Aligned_cols=102 Identities=17% Similarity=0.309 Sum_probs=85.4
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe--cCCCeE
Q 029353 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA--EDSSAV 160 (194)
Q Consensus 83 ~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via--~G~d~V 160 (194)
....++++++||++++++|++++.++|+||++|++|..+.+++|++++++||..++.. +++ |++..... +| +.+
T Consensus 8 ~~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~~v~~~~~~~~~~-~~~--f~~~~~~~~~dg-~~~ 83 (143)
T 3mso_A 8 EANAAATLAEWHGLIARRDLSGLPRLLHPDAVFRSPMAHKPYAGAPVVSMILNTVLTV-FED--FAYHRQLASADG-RSV 83 (143)
T ss_dssp CHHHHHHHHHHHHHHHTTCCTTGGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHH-CEE--EEEEEEEEETTS-SEE
T ss_pred cHHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCccCHHHHHHHHHHHHhh-CCc--eEEEEEEEccCC-CEE
Confidence 4457899999999999999999999999999999998777999999999999988865 465 45555555 45 777
Q ss_pred EEEEEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 161 GVTWHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 161 av~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+++|+.+.+|+ .+ +||++++|++ ||||+
T Consensus 84 ~~~f~~~~~g~--~v-~Gv~v~~~~~-dGkI~ 111 (143)
T 3mso_A 84 VLEFSARVGER--EL-KGIDMIRFDD-DGRIV 111 (143)
T ss_dssp EEEEEEEETTE--EE-EEEEEEEECT-TSCEE
T ss_pred EEEEEEEECCE--EE-EEEEEEEECC-CCcEE
Confidence 77888777787 66 7999999953 89996
No 35
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=99.67 E-value=1.6e-15 Score=117.28 Aligned_cols=103 Identities=22% Similarity=0.318 Sum_probs=87.2
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCC---CCccCHHHHHHHHHHhhhhcCC-CcEEEEEEEEecCCC-e
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFP---RPFLGRKATLDFFKKFSDSISS-DLQFVIDDISAEDSS-A 159 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~---g~~~Greair~~~~~~~~~~~~-d~~~~i~~via~G~d-~ 159 (194)
++++++++||++|+++|++++.++|+||++|++|+.+ +++.|+++++++++.+ ..... ++++++..++++| + .
T Consensus 30 ~~~~~v~~~~~a~~~gD~~~l~~l~a~D~~~~~~~~~~~~g~~~G~~~i~~~~~~~-~~~~~~~~~~~i~~~~~~g-d~~ 107 (156)
T 1tuh_A 30 QNAETVRRGYAAFNSGDMKTLTELFDENASWHTPGRSRIAGDHKGREAIFAQFGRY-GGETGGTFKAVLLHVLKSD-DGR 107 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEECSSSTTCEEEESHHHHHHHHHHH-HHTTTTCCEEEEEEEEECT-TSC
T ss_pred hHHHHHHHHHHHHhCCCHHHHHHhcCCCEEEEccCCCCccceEcCHHHHHHHHHHH-HhhcCCceEEEEEEEEEcC-CCE
Confidence 4788999999999999999999999999999988642 3479999999999985 44332 7899999999988 6 7
Q ss_pred EEEEEEE--EeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHL--EWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~--e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+++|.. ..+|+++.+ .++++|++ +||||+
T Consensus 108 v~~~~~~~~~~~G~~~~~-~~~~~~~~--~dGkI~ 139 (156)
T 1tuh_A 108 VIGIHRNTAERGGKRLDV-GCCIVFEF--KNGRVI 139 (156)
T ss_dssp EEEEEEEEEEETTEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEEecCCcEEee-eeEEEEEE--ECCEEE
Confidence 7776654 347999999 79999999 899996
No 36
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=99.67 E-value=1.1e-16 Score=119.35 Aligned_cols=99 Identities=14% Similarity=0.167 Sum_probs=83.3
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCC-------CCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCC
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF-------PRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDS 157 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~-------~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~ 157 (194)
++++++++|+++||++|++++.+||+||++|++|.. ++++.|+++++++|+.++.. +|++++++..++.++
T Consensus 9 ~~~~~~~~~~~a~n~~D~~~l~~l~a~D~v~~~p~~~~~~g~~~~~~~G~~ai~~~~~~~~~~-~~~~~~~~~~~~~~~- 86 (122)
T 3h3h_A 9 FAQQFSREWIDAWNAHDLDAILSHYADGFEMSSPMIVQIAGEPSGRLRGKEQVGAYWREALRM-IPDLHFEWIATLAGV- 86 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECHHHHHHHC-CCCEEEHHHHHHHHHHHHHHH-CTTCCCEEEEEEECS-
T ss_pred HHHHHHHHHHHHHhccCHHHHHHhcCCCEEEECCCcccccCCCCCcEEcHHHHHHHHHHHHHH-CCCcEEEEEEEEecC-
Confidence 467899999999999999999999999999999842 25789999999999998875 689999998887766
Q ss_pred CeEEEEEEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 158 SAVGVTWHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 158 d~Vav~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.++++|+. .+|+++ |++|+|++ ||||+
T Consensus 87 ~~~~~~~~~-~~G~~~-----~~~~~~~~-dGkI~ 114 (122)
T 3h3h_A 87 DSVAIHYRG-AKGRLA-----LEVFHFGP-DRRVV 114 (122)
T ss_dssp SEEEEEEEC-GGGCEE-----EEEEEECT-TSSEE
T ss_pred cEEEEEEEC-CCCCEE-----EEEEEECC-CCcEE
Confidence 777777764 356543 79999963 89996
No 37
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=99.64 E-value=5.8e-16 Score=121.26 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=82.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC----CCCCccCHHHHHHHHHHhhhhcCCCcEEEE--EEEEecCC
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI----FPRPFLGRKATLDFFKKFSDSISSDLQFVI--DDISAEDS 157 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~----~~g~~~Greair~~~~~~~~~~~~d~~~~i--~~via~G~ 157 (194)
.++++++++||++|+++|++++.+||+||++|++|. .++.+.|+++++++++.++.. +++. +.. ....++|
T Consensus 23 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~g~~~~~~G~~ai~~~~~~~~~~-~~~~-~~~~~~~~~~~g- 99 (163)
T 1z1s_A 23 MNAKEILVHSLRLLENGDARGWCDLFHPEGVLEFPYAPPGWKTRFEGRETIWAHMRLFPEH-LTVR-FTDVQFYETADP- 99 (163)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECSSCCTTSCCEEESHHHHHHTTTTGGGT-EEEE-ECCCEEECCSST-
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECcCCCCCCCcccCCHHHHHHHHHHHHHh-Cccc-eeeeEEEEEeCC-
Confidence 458899999999999999999999999999999873 234589999999999977653 4554 321 1122455
Q ss_pred CeEEEEEEEEe----CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 158 SAVGVTWHLEW----KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 158 d~Vav~~~~e~----~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.|+++|+... .|+++.+ ++|++|++ +||||+
T Consensus 100 ~~vv~~~~~~g~~~~tG~~~~~-~~~~v~~v--~dGkI~ 135 (163)
T 1z1s_A 100 DLAIGEFHGDGVATVSGGKLAQ-DYISVLRT--RDGQIL 135 (163)
T ss_dssp TEEEEEEEEEEEETTTCCEEEE-EEEEEEEE--ETTEEE
T ss_pred CEEEEEEEEEEEEeCCCCEEcc-ceEEEEEe--cCCEEE
Confidence 88888888753 5999999 79999999 899996
No 38
>3er7_A Uncharacterized NTF2-like protein; YP_001812677.1, NTF2-like protein of unknown function, struc genomics; HET: MSE; 1.50A {Exiguobacterium sibiricum 255-15} SCOP: d.17.4.24
Probab=99.64 E-value=2.3e-16 Score=121.60 Aligned_cols=103 Identities=15% Similarity=0.281 Sum_probs=81.6
Q ss_pred CcHHHHHHHHHHHHh-----CCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE-ecCC
Q 029353 84 GGGAVVVRRFYAGIN-----GRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS-AEDS 157 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n-----~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi-a~G~ 157 (194)
+.|+++|++||+.++ .+|++.+.+||+||+++ |..+.++.|++++++||+.++.. +++.++.++..+ .+++
T Consensus 2 ~~n~~~v~ry~~~~d~~~~d~~d~~~l~~Lfa~Dav~--~~~~~~~~G~~ai~~F~~~~~~a-~~~~~~~~~~~v~~~~g 78 (131)
T 3er7_A 2 MMNTTTLDRYFDLFDASRTDEKAFDDLISLFSDEITF--VLNGQEQHGIDAWKQFVRMVFTA-NQDIKHMYAGWVPSETG 78 (131)
T ss_dssp ----CHHHHHHHHHHHTTTCHHHHHHHHHTEEEEEEE--EETTEEEESHHHHHHHHHHHHHH-EEEEEEEECCCEECSST
T ss_pred CcHHHHHHHHHHHHhhccCCccCHHHHHHHhCCCeEe--cCCCCCcCChHHHHHHHHHHHhh-CcCceEEEEEEEEecCC
Confidence 468899999999886 35699999999999999 33233689999999999988765 688887766543 4444
Q ss_pred CeEEEEEEEEe---CCeeEeeeceEEEEEEEee-CCeEE
Q 029353 158 SAVGVTWHLEW---KGKPFPFSKGCSFYKLEVV-NGKRQ 192 (194)
Q Consensus 158 d~Vav~~~~e~---~Gk~i~~t~g~~~fr~~~~-dGKI~ 192 (194)
+.|+++|.+.. .|+++.+ +++++|+| + ||||+
T Consensus 79 d~~~~~w~~~g~~~~G~~~~~-~g~dv~~f--d~dGkI~ 114 (131)
T 3er7_A 79 DTMETRWAVCGKSADGSVFTQ-DGTDIARL--NADGKIV 114 (131)
T ss_dssp TCEEEEEEEEEEETTSCEEEE-EEEEEEEE--CTTSCEE
T ss_pred CEEEEEEEEEEEECCCCEEEE-eeeEEEEE--cCCCcEE
Confidence 89999998854 4999999 79999999 5 89996
No 39
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=99.63 E-value=3.9e-15 Score=111.71 Aligned_cols=102 Identities=15% Similarity=0.201 Sum_probs=85.8
Q ss_pred cHHHHHHHHHHHHhCCCHH----HHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEE-EEEecCCCe
Q 029353 85 GGAVVVRRFYAGINGRDLA----SVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVID-DISAEDSSA 159 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~d----al~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~-~via~G~d~ 159 (194)
++++++++|+++||++|.+ +|.++|+||++|++|.. ++.|++++++++..++.. ++++++++. .+...+ +.
T Consensus 4 ~~~~~v~ry~~aw~~~d~~~~~~~l~~l~a~D~~~~dP~~--~~~G~~ai~~~~~~~~~~-~~~~~f~~~~~~~~~~-~~ 79 (121)
T 3dxo_A 4 QHLTIAQTYLAAWNEEDNERRRHLVGQAWAENTRYVDPLM--QGEGQQGIAAMIEAARQK-FPGYRFVLAGTPDGHG-NF 79 (121)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHEEEEEEEECSSC--EEEHHHHHHHHHHHHHHH-STTCEEEEEEEEEEET-TE
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHhcCCCeEEECCCC--CcCCHHHHHHHHHHHHHH-CCCcEEEEccCcceeC-CE
Confidence 4678999999999999985 79999999999999986 599999999999988765 699999987 665565 67
Q ss_pred EEEEEEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.++|.+...|....+ .|+++++|++ ||||+
T Consensus 80 ~~~~w~~~~~~g~~~~-~G~d~l~~~~-dGrI~ 110 (121)
T 3dxo_A 80 TRFSWRLISPDGDDVA-GGTDVVSLNT-EGRID 110 (121)
T ss_dssp EEEEEEEECTTSCEEE-EEEEEEEECT-TSSEE
T ss_pred EEEEEEEeCCCCCcee-eEEEEEEECC-CCCEE
Confidence 7779998654445567 7999999932 99996
No 40
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=99.61 E-value=3.7e-15 Score=118.17 Aligned_cols=99 Identities=14% Similarity=0.208 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTWH 165 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~~ 165 (194)
+.+++++|+++|+.||++++.+||+|||++++|....++.|+++++++|..++.. +++++++ ....+| +.++++|.
T Consensus 20 ~~~~v~~f~~A~~~gD~~aL~~LlA~Dvv~~sP~~~~p~~Gr~av~~~l~~~~~~-~~df~~~--~~~v~G-~~avl~f~ 95 (155)
T 3flj_A 20 MHPTIARMQEVVAKGDESLIHALLAEDVRFMPPTYYKTWTGRDPVAAVLGHVGQV-FSEFRYR--RIMGEG-KDWALEFQ 95 (155)
T ss_dssp CCHHHHHHHHHHTTTCHHHHHTTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHH-EEEEEEE--EEEEET-TEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCHHHHHHhcCCCEEEECCCCCCCcCCHHHHHHHHHHHHhh-CCCcEEE--EEEEcC-CEEEEEEE
Confidence 5679999999999999999999999999999998888999999999999987765 4766555 455677 78888888
Q ss_pred EEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 166 LEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 166 ~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
.+.+|.. + +||++++|++ ||||+
T Consensus 96 ~~~~g~~--v-~gvd~~~fde-dGkI~ 118 (155)
T 3flj_A 96 CKVGELD--A-VGVDLITLNE-GGLIQ 118 (155)
T ss_dssp EEETTEE--E-EEEEEEEECT-TSSEE
T ss_pred EEECCEE--E-EEEEEEEEcC-CCCEE
Confidence 8777764 4 6999999963 89996
No 41
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=99.61 E-value=1.2e-14 Score=108.53 Aligned_cols=96 Identities=14% Similarity=0.294 Sum_probs=81.7
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEE
Q 029353 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGV 162 (194)
Q Consensus 83 ~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav 162 (194)
+..+++++++||+||++||++++.+|++||++|+.|. +++.|++++.+++..+.. .++++.+.++| +.+++
T Consensus 5 ~~~~~~~v~~f~~A~~~gD~~~l~~lla~Dvv~~~~~--g~~~G~~~v~~~~~~~~~------~~~~~~~~~~G-~~v~~ 75 (114)
T 3f40_A 5 QITTRDLVLEFIHALNTENFPAAKKRLNENFTFNGPM--GHREGSERYMNDMEKMKF------KYVVHKMFEEG-NDVCL 75 (114)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEETT--EEEESHHHHHHHHHHHCC------EEEEEEEEEET-TEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCC--CcccCHHHHHHHHHHHHh------heEEEEEEecC-CcEEE
Confidence 4568899999999999999999999999999999875 478999999999986532 67888888888 77777
Q ss_pred EEEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 163 TWHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 ~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
.|.....|+. + ..+.+|++ +||||+
T Consensus 76 ~~~~~~~g~~--~-~~~~~~~v--~dGrI~ 100 (114)
T 3f40_A 76 IYDINMNGKT--I-AASGLYHL--EKGEIT 100 (114)
T ss_dssp EEEEEETTEE--E-EEEEEEEE--ETTEEE
T ss_pred EEEEecCCcE--e-ecceEEEE--cCCeEE
Confidence 7777667777 4 47899999 899996
No 42
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=99.60 E-value=9.3e-15 Score=125.13 Aligned_cols=103 Identities=13% Similarity=0.048 Sum_probs=87.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE--ecCCCeEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSAVG 161 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi--a~G~d~Va 161 (194)
..+++++++||++||++|++++.+||+||+++++|..+.++.|++++++||+.++.. . .++.+...+ .+| +.++
T Consensus 138 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~v~~~P~~~~~~~G~~ai~~~~~~~~~~--~-~~~~~~~~~~~~~g-~~aa 213 (283)
T 3rga_A 138 ERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAVGS--N-VRETAGLTVAGQDG-RHAA 213 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEESSTTSCEEESHHHHHHHHHHHHHT--T-CEEEEEEEEECTTS-SEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCeEEECCCCCCcccCHHHHHHHHHHhhcc--C-cEEEEeeEEecCCC-CEEE
Confidence 357889999999999999999999999999999998767899999999999988764 2 355665655 345 8899
Q ss_pred EEEEEEe-----------------------CCeeEeeeceEEEEEEEeeCCeEE
Q 029353 162 VTWHLEW-----------------------KGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 162 v~~~~e~-----------------------~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
++|+++. .|+++.+ +||++|+|+ +||||+
T Consensus 214 ~~~~~~~~y~~~g~~~~~~g~~~~~~p~~~~G~~~~~-~g~~~~~~~-~dGkI~ 265 (283)
T 3rga_A 214 VTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGI-EYVMVIGVD-ADGLID 265 (283)
T ss_dssp EEEEEEEESTTHHHHHHHTTSCCSCCCSCTTTCEEEE-EEEEEEEEC-TTSCEE
T ss_pred EEEEEEEEeecccccccccccccccCCcCCCCceEEE-EEEEEEEEC-CCccEE
Confidence 9888763 4889999 899999995 289996
No 43
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=99.58 E-value=1.7e-14 Score=113.12 Aligned_cols=101 Identities=13% Similarity=0.212 Sum_probs=83.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
...++++++|+++++.||+++|.+||+||+++++|..+.++.|++++++||..++.. ++++++ .....+| +..+++
T Consensus 20 ~~~~~~l~~f~~a~~~gD~~aL~~LlA~Dvv~~~P~~~~~~~G~~av~~~~~~~~~~-~~~f~~--~~~~~~g-~~~~l~ 95 (148)
T 3f8x_A 20 AAVQSGLQEWHRIIAEADWERLPDLLAEDVVFSNPSTFDPYHGKGPLMVILPAVFSV-LENFQY--ARHFSSK-SGYVLE 95 (148)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGSGGGEEEEEEEECSSCSSCEESHHHHHHHHHHHHHH-CEEEEE--EEEEECS-SEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhCCCEEEECCCCCCCcCCHHHHHHHHHHHHhh-CCCEEE--EEEEEeC-CeEEEE
Confidence 346789999999999999999999999999999998878899999999999988765 476554 4556655 555778
Q ss_pred EEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 164 WHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
|+.+.+|.. + .||++++|++ ||||+
T Consensus 96 f~~~~~g~~--v-~Gvdvl~~d~-dGkI~ 120 (148)
T 3f8x_A 96 FNANMGDEL--L-TGVDLIEFND-AGKIT 120 (148)
T ss_dssp EEEEETTEE--E-EEEEEEEECT-TSCEE
T ss_pred EEEEECCEE--E-EEEEEEEECC-CCcEE
Confidence 887766654 5 7999999953 89996
No 44
>3rga_A Epoxide hydrolase; NTF2-like, epoxide-opening cyclic ether formation, isomerase; HET: LSB ILD; 1.59A {Streptomyces lasaliensis}
Probab=99.55 E-value=1.8e-14 Score=123.39 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=85.9
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE--ecCCCeEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSAVG 161 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi--a~G~d~Va 161 (194)
.++++++++|+++++++|++++.+||+||+++++|..+.++.|++++++||..++... . ++++..++ ++| +.|+
T Consensus 6 ~~~~~~v~~~~~~~~~~D~~~l~~l~a~Dav~~~P~~~~~~~Gr~ai~~~~~~~~~~~-~--~~~~~~~~~~~~G-~~v~ 81 (283)
T 3rga_A 6 TVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPLGTEPVVGRAALAARLAPALRGA-V--HEEPGRPYAAHDG-TSVV 81 (283)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEEEEEECSSSSCCEESHHHHHHHHHHHHHTT-C--EEEECCCBCCSSS-SEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCCCCCcCcHHHHHHHHHHHHhhc-C--ceEEEEEEeeeeC-CEEE
Confidence 3578899999999999999999999999999999987678999999999999887653 3 45666665 566 8888
Q ss_pred EEEEEEeC--C----eeEeeeceEEEEEEEeeCCeEE
Q 029353 162 VTWHLEWK--G----KPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 162 v~~~~e~~--G----k~i~~t~g~~~fr~~~~dGKI~ 192 (194)
++|+++.. | +++.+ +|+++|+|++ ||||+
T Consensus 82 ~~~~~~~~~~g~~~g~~v~~-~gi~v~r~d~-dGkI~ 116 (283)
T 3rga_A 82 LPATVTVGAPGAPPQRRGRT-RVMGVIEVGE-DGLIR 116 (283)
T ss_dssp EEEEEEECSTTCCGGGCEEE-EEEEEEEECT-TSCEE
T ss_pred EEEEEEEEeCCCCccceEEE-EEEEEEEECC-CCcEE
Confidence 88877543 4 45889 8999999963 89996
No 45
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=99.54 E-value=1.5e-13 Score=101.19 Aligned_cols=106 Identities=16% Similarity=0.104 Sum_probs=83.2
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEE--
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGV-- 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav-- 162 (194)
..++++.+|+++++++|++++.+||+||+++.+|. ++++.|+++|+++|+.++...++.++++...+..+| +.+.+
T Consensus 7 ~I~~~~~~~~~a~~~~D~~~~~~l~a~Da~~~~~~-~~~~~G~~~i~~~~~~~~~~~~~~~~~~~~~v~~~g-d~A~~~~ 84 (129)
T 3hx8_A 7 AIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPD-MARVDGRQNIQKLWQGAMDMGISELKLTTLDVQESG-DFAFESG 84 (129)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTT-SCCEESHHHHHHHHHHHHHTTCEEEEEEEEEEEEET-TEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhCCCeEEeCCC-CCcccCHHHHHHHHHHHHhCCCceEEEEEEEEEcCC-CEEEEEE
Confidence 46789999999999999999999999999998764 457899999999999888743456777777777777 66555
Q ss_pred EEEEEe---CCeeEee-eceEEEEEEEee-CCeEEEC
Q 029353 163 TWHLEW---KGKPFPF-SKGCSFYKLEVV-NGKRQIT 194 (194)
Q Consensus 163 ~~~~e~---~Gk~i~~-t~g~~~fr~~~~-dGKI~i~ 194 (194)
.|++.. +|+++.. .+.+.+|+. + ||+++|+
T Consensus 85 ~~~~~~~~~~G~~~~~~g~~~~v~~r--~~dG~W~i~ 119 (129)
T 3hx8_A 85 SFSLKAPGKDSKLVDAAGKYVVVWRK--GQDGGWKLY 119 (129)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEEE--CTTSCEEEE
T ss_pred EEEEEeeCCCCCeeeeeEEEEEEEEE--CCCCcEEEE
Confidence 455543 4776542 156788888 7 9999984
No 46
>3lyg_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE GOL; 1.61A {Colwellia psychrerythraea}
Probab=99.53 E-value=2.7e-13 Score=101.54 Aligned_cols=104 Identities=8% Similarity=0.030 Sum_probs=88.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
++...+|++.++++++||+|.+.++|+||.+++.|...+.++||+++++.+..+.+..++++.++..+++++| +.|+..
T Consensus 2 M~~~~iVqrlW~al~AgD~D~l~adyaeDaV~i~P~sa~vl~GR~~~r~a~~~L~~~lP~g~~It~lR~i~gg-n~VVSe 80 (120)
T 3lyg_A 2 MNLANIVQRGWEALGAGDFDTLVTDYVEKMIFIMPGQADVLKGRQAFRSALDNLGEILPPGFEITGLRQLEGE-NEIVSI 80 (120)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEECSSTTCEEESHHHHHHHHTTHHHHSCTTCEEEEEEEEECS-SEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHhcccCeEEEccCccceeecHHHHHHHHHHHHhhCCCCceeeeEEEecCC-CEEEEE
Confidence 5677899999999999999999999999999999999899999999999888888888888999998998888 777664
Q ss_pred EEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 164 WHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
.....++-. .. +.+.+|+| +||||.
T Consensus 81 ve~~~~~~~-~~-~~~~lf~f--~~g~I~ 105 (120)
T 3lyg_A 81 VEWKSDKMI-AS-QLSVLFKF--EGDQIY 105 (120)
T ss_dssp EEEEETTEE-EE-EEEEEEEE--ETTEEE
T ss_pred EEEcCCCee-eE-EEEEEEEE--ECCEEE
Confidence 443333332 23 57899999 999996
No 47
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=99.52 E-value=2.4e-13 Score=101.00 Aligned_cols=107 Identities=13% Similarity=0.115 Sum_probs=81.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe-cCCCeEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA-EDSSAVGV 162 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via-~G~d~Vav 162 (194)
...++++++|+++++++|++++.+||+||++++.|.. .++.|+++++++|+.++.....+.+++++.+.. +| +.+.+
T Consensus 11 ~~i~~~~~~~~~a~~~~D~~~~~~l~a~D~v~~~~~~-~~~~G~~ai~~~~~~~~~~~~~~~~~~~~~i~~~~g-d~a~~ 88 (135)
T 3d9r_A 11 AVIEAAAIAYLTAFNRADIPAVIATYTDDGVLMGPGR-PAAVGKDELAEVYLSVFETVGFDMAYEIKEVVQTSA-DWAFV 88 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTS-CCEESHHHHHHHHHHHHHHEEEEEEEEEEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCEEEECCCC-CcccCHHHHHHHHHHHHhhcCCceeEEEEEEEEecC-CEEEE
Confidence 3468899999999999999999999999999997754 356799999999999886443467788877766 66 66666
Q ss_pred EEEE--Ee----CCeeEee-eceEEEEEEEee-CCeEEEC
Q 029353 163 TWHL--EW----KGKPFPF-SKGCSFYKLEVV-NGKRQIT 194 (194)
Q Consensus 163 ~~~~--e~----~Gk~i~~-t~g~~~fr~~~~-dGKI~i~ 194 (194)
++.. .. .|+.+.. .+...+|+. . ||+++|+
T Consensus 89 ~~~~~~~~~~~~~g~~~~~~~~~~~v~~~--~~dG~W~i~ 126 (135)
T 3d9r_A 89 RSATEGTETNKATGVVTPAAYQELFLLRK--SATGSWQTA 126 (135)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEEEEEEEE--CTTSCEEEE
T ss_pred EEEEEEEEecCCCCCceeecccEEEEEEe--cCCCcEEEE
Confidence 5443 22 3655443 035667777 6 9999984
No 48
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=99.48 E-value=1.1e-13 Score=112.59 Aligned_cols=103 Identities=16% Similarity=0.075 Sum_probs=85.1
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC----CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe-cCCCe
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI----FPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA-EDSSA 159 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~----~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via-~G~d~ 159 (194)
.|+++|++|++++.+ |++.+.+|||||++|+.|. ++..+.||+++++++..+.. .+++++|....+.. .+++.
T Consensus 42 ~nr~vV~~yl~~~~~-D~~~~~eLfAeDav~e~P~~~~G~P~r~~GReai~~~~~~~~~-~~~d~~~~~~~v~~taDpd~ 119 (185)
T 3jum_A 42 HNRKIVEQYMHTRGE-ARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQ-CFPDWVWTDIQIFETQDPNW 119 (185)
T ss_dssp HHHHHHHHHHHCCGG-GGGGGGGGEEEEEEEEESCCTTSSCEEEESHHHHHHHHHHHHH-HSTTCEEEEEEEECCSSTTE
T ss_pred HHHHHHHHHHHHhcc-CHHHHHHhCCCCEEEEecCCCCCCCccccCHHHHHHHHHHHHh-hCCCCeeeEEEEEEecCCCE
Confidence 488999999999887 9999999999999999752 34458999999999998775 56888888766643 23378
Q ss_pred EEEEEEEE----eCCee---EeeeceEEEEEEEeeCCeEE
Q 029353 160 VGVTWHLE----WKGKP---FPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 160 Vav~~~~e----~~Gk~---i~~t~g~~~fr~~~~dGKI~ 192 (194)
|++++++. ..|++ +.+ .+|++|++ +||||+
T Consensus 120 VvvE~~~~Gtv~~TGkp~~~Y~~-~yi~V~rV--rDGKIv 156 (185)
T 3jum_A 120 FWVECRGEGAIVFPGYPRGQYRN-HFLHSFRF--ENGLIK 156 (185)
T ss_dssp EEEEEEEEEEECCTTSCCEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEEEEcCCCCccceEEE-eEEEEEEE--ECCEEE
Confidence 88888764 36887 999 79999999 999997
No 49
>3ff0_A Phenazine biosynthesis protein PHZB 2; cystatin-like fold, antibiotic biosynthesis, virulence, STRU genomics; 1.90A {Pseudomonas aeruginosa}
Probab=99.41 E-value=5.1e-13 Score=106.67 Aligned_cols=104 Identities=16% Similarity=0.140 Sum_probs=85.9
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeE---EE-cCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEec-CCC
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCV---YE-DLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAE-DSS 158 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v---~~-dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~-G~d 158 (194)
..|+++|++|++. ..+|.+++.+||+||++ |+ +++.+..+.||+++++++..+.. .+++++|....+... +++
T Consensus 19 ~~Nr~vV~~~l~~-~~~D~~~~~~LfAeD~v~~~~e~~~G~P~~~~Gre~l~~~~~~~~~-~~~~~~~~~~~i~~t~Dpd 96 (163)
T 3ff0_A 19 RKNRETVVKYMNT-KGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLK-CFPDWEWYNIKVFETDDPN 96 (163)
T ss_dssp HHHHHHHHHHHTC-CGGGGGGGGGGEEEEEEEEESSCSSSSCEEEESHHHHHHHHHHHHH-HSTTCEEEEEEEEEBSSTT
T ss_pred HHHHHHHHHHHHH-hcCCHHHHHHhcCCcccceeeEECCCCCcceecHHHHHHHHHHHHh-hCCCceeeeEEEEEcCCCC
Confidence 3589999999964 46899999999999999 98 34566678999999999997665 578998887766644 337
Q ss_pred eEEEEEEEEe----CCee---EeeeceEEEEEEEeeCCeEE
Q 029353 159 AVGVTWHLEW----KGKP---FPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 159 ~Vav~~~~e~----~Gk~---i~~t~g~~~fr~~~~dGKI~ 192 (194)
.|+++|++.. .|++ +.. .+|++|++ +||||+
T Consensus 97 ~vvvE~~~~g~i~~tG~~~~~y~~-~yi~v~~v--rdGkI~ 134 (163)
T 3ff0_A 97 HFWVECDGHGKILFPGYPEGYYEN-HFLHSFEL--DDGKIK 134 (163)
T ss_dssp EEEEEEEEEEEECCTTSCCEEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEEEEEEEcCCCcccccEEE-eEEEEEEE--eCCEEE
Confidence 8888888743 5999 999 79999999 999997
No 50
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=99.34 E-value=2.8e-11 Score=91.55 Aligned_cols=106 Identities=17% Similarity=0.207 Sum_probs=80.7
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEE--EecCCCeEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI--SAEDSSAVGV 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~v--ia~G~d~Vav 162 (194)
+.++++.+|++|++++|++++.++|+||+++.++..+....|+++++++|+.+|......+++++.++ ...| +.+.+
T Consensus 9 ~I~~l~~~~~~A~~~~D~~~~~~l~a~D~v~~~~~~~~~~~G~~air~~~~~~~~~~~~~~~~~~~~~~v~~~g-d~A~~ 87 (142)
T 3f7s_A 9 EIRQLIERWMQAVRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEMCMGMCTGPMVFELAQLTVHAAG-DLALA 87 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECSSSSSCEESHHHHHHHHHHHHHTCCSCEEEEEEEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHHhCCCceEEEEeeeEEEEcC-CEEEE
Confidence 47789999999999999999999999999998776555568999999999988875433677777654 3455 55555
Q ss_pred EEEE--Ee---CCeeEeeeceEEEEEEEeeCCeEEEC
Q 029353 163 TWHL--EW---KGKPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 ~~~~--e~---~Gk~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
.+.. .. +|..... +...+|+- .||+++|+
T Consensus 88 ~~~~~~~~~~~~g~~~~~-r~T~v~~r--~~g~W~iv 121 (142)
T 3f7s_A 88 HWLNRCGPGDDESQCGFM-RATVGYRR--QGGQWQVI 121 (142)
T ss_dssp EEEEEEEESSCGGGCEEE-EEEEEEEE--ETTEEEEE
T ss_pred EEEEEEeeecCCCcceee-EEEEEEEE--eCCEEEEE
Confidence 4433 22 2444555 67789999 89999985
No 51
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=99.33 E-value=4.9e-11 Score=92.11 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=79.4
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEE-
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGV- 162 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav- 162 (194)
.+.++++.+|+++|+++|++++.++|+||+++.++..+..+.|+++++++|+.++.. .+...++.+.+...+++...+
T Consensus 20 ~~I~~~~~~~~~A~~~~D~~~l~~l~a~Dav~~~~~~~~~~~G~~~i~~~~~~~~~~-~~~~~i~~~~i~~~~gd~A~~~ 98 (156)
T 3h51_A 20 REVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRASREQIENYFEMFLTK-KPKGVINYRTVRLLDDDSAVDA 98 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECSSCSSCBCSHHHHHHHHHHHGGG-CCEEEEEEEEEEECSSSEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCEEEecCCCCccccCHHHHHHHHHHHHhh-CCCCcccceEEEEecCCeEEEE
Confidence 457889999999999999999999999999998765555689999999999988864 344455554443333355444
Q ss_pred -EEEEEe---CCee--EeeeceEEEEEEEeeCCeEEEC
Q 029353 163 -TWHLEW---KGKP--FPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 -~~~~e~---~Gk~--i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
.|++.. +|+. ... +...+|+. +||+++|+
T Consensus 99 ~~~~~~~~~~~G~~~~~~~-r~t~v~~r--~dG~WkIv 133 (156)
T 3h51_A 99 GVYTFTLTDKNGKKSDVQA-RYTFVYEK--RDGKWLII 133 (156)
T ss_dssp EEEEEEEECTTSCEEEEEE-EEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEcCCCCeEEEEe-EEEEEEEE--ECCEEEEE
Confidence 444443 4653 344 67788888 89999985
No 52
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=99.32 E-value=7.4e-12 Score=95.21 Aligned_cols=107 Identities=11% Similarity=0.050 Sum_probs=70.9
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhc--CCCcEEEEEEEEecCCCeEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSI--SSDLQFVIDDISAEDSSAVGV 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~--~~d~~~~i~~via~G~d~Vav 162 (194)
+..+++.+|++|++++|++++.++|+||+++...+ +.++.|+++|+++|+.++... ...+++....+...| +.+.+
T Consensus 4 ~I~~l~~~~~~A~~~~D~d~~~~lfa~Dav~~~~~-g~~~~G~~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~g-d~A~~ 81 (142)
T 2gxf_A 4 QLKDIISACDLAIQNEDFDTLMNYYSEDAVLVVKP-GMIARGKEEIKKAFITIANYFNHHIVPTQGKMILLEAG-DTVLV 81 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHTTSEEEEEEEECSS-SCEEEHHHHHHHHHHHTTSCCCSSCCCEEEEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCEEEEcCC-CCcccCHHHHHHHHHHHHHhhCCCceEEEEEEEEEEcC-CEEEE
Confidence 46789999999999999999999999999995433 457999999999999877532 223444444455566 44333
Q ss_pred --EEEEE--eCCeeEeee-ceEEEEEEEeeCCeEEEC
Q 029353 163 --TWHLE--WKGKPFPFS-KGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 --~~~~e--~~Gk~i~~t-~g~~~fr~~~~dGKI~i~ 194 (194)
.|++. ..|+++... +...+|+.+ +||+++|+
T Consensus 82 ~~~~~~~~~~~G~~~~~~g~~t~v~~r~-~dG~Wri~ 117 (142)
T 2gxf_A 82 LSQTLLDSDKKDSEYAMERRATYVFKKN-AQGEWLCV 117 (142)
T ss_dssp EEEEECCC---------EEEEEEEEEEC-TTSCEEEE
T ss_pred EEEEEEEECCCCCeEeeeEEEEEEEEEC-CCCCEEEE
Confidence 55553 346665551 236677663 28998874
No 53
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=99.21 E-value=2.5e-10 Score=88.28 Aligned_cols=105 Identities=13% Similarity=0.155 Sum_probs=79.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCC--eEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEE--EecCCCe
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADD--CVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI--SAEDSSA 159 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD--~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~v--ia~G~d~ 159 (194)
....++..+||+||+++|+++|+++|++| +++.+|.. ..+.|++++++.|+.+|... +.+++++.++ ..+| +.
T Consensus 8 ~~~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g-~~l~G~~ai~~~w~~~f~~~-~~~~i~~~~v~v~~~g-d~ 84 (144)
T 3gwr_A 8 PTPEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLA-APLNGRAAVAAGWRSMFGAA-GRFRLQVKAVHEIRQA-DH 84 (144)
T ss_dssp SSHHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTC-CCEESHHHHHHHHHHHHHHH-CCEEEEEEEEEEEECS-SE
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCC-CCcccHHHHHHHHHHHHcCC-CcEEEEEEEEEEEecC-CE
Confidence 45789999999999999999999999999 77767754 47899999999999998754 4577776654 3444 44
Q ss_pred EEE--EEEEEeC---CeeEeeeceEEEEEEEeeCCeEEEC
Q 029353 160 VGV--TWHLEWK---GKPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 160 Vav--~~~~e~~---Gk~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
..+ .+++... |....+ +...+|+- .+|+++|+
T Consensus 85 A~v~~~e~~~~~~~~g~~~~~-r~T~V~~r--~~g~Wriv 121 (144)
T 3gwr_A 85 VIRIVDEFLTIGDETAPRPAI-LATNVYRR--EADGWRMV 121 (144)
T ss_dssp EEEEEEEEEEETTCSSCCCCE-EEEEEEEE--CSSSEEEE
T ss_pred EEEEEEEEEEecCCCCceeeE-EEEEEEEE--ECCEEEEE
Confidence 333 4455432 333445 67899999 78999885
No 54
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=99.20 E-value=2.7e-10 Score=87.80 Aligned_cols=106 Identities=14% Similarity=0.172 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEE--
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGV-- 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav-- 162 (194)
..++++.+|++|++++|++++.+||+||++|..+.. +..|++++++.|...+.....+..++++.+..+| +...+
T Consensus 18 aI~~l~~~~~~A~~~gD~~~l~al~a~D~v~~~~g~--~~~Gr~ai~a~~~~~~~~~~~~~~~~~~~i~v~G-D~A~~~~ 94 (139)
T 3rob_A 18 AIRTVQYRWLEATRKFDRQVLSSLMTDDVVFLTPGR--LPFGKEEFLAACEQNDQRVIIEASATFEEIVIVE-PMAYTRT 94 (139)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEEEEECTTS--CCBCHHHHHHHHHHHHHHEEEEEEEEEEEEEEET-TEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHccCcEEEECCCC--CccCHHHHHHHHHHHHHhcCCCCceEEEEEEEcC-CeEEEEE
Confidence 467899999999999999999999999999866543 4559999999998877765456778888888888 65444
Q ss_pred EEEEEe----CCeeEeee-ceEEEEEEEeeCCeEEEC
Q 029353 163 TWHLEW----KGKPFPFS-KGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 ~~~~e~----~Gk~i~~t-~g~~~fr~~~~dGKI~i~ 194 (194)
.|+... .|++.... +...+|+=+ .||+++|+
T Consensus 95 ~~~~~~t~~~~g~~~~~~g~~~~v~rK~-~dG~W~i~ 130 (139)
T 3rob_A 95 HLHIKVTPRSGGAVRELAGHAMSIFRRS-MFGEWQLA 130 (139)
T ss_dssp EEEEEEEETTSCCCEEEEEEEEEEEEEC-TTSCEEEE
T ss_pred EEEEEEecCCCCceeEeeccEEEEEEEC-CCCcEEEE
Confidence 444321 35666551 244555543 39999884
No 55
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=99.20 E-value=3.2e-10 Score=85.78 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=78.6
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC-CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEE--EEecCCCeEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI-FPRPFLGRKATLDFFKKFSDSISSDLQFVIDD--ISAEDSSAVG 161 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~-~~g~~~Greair~~~~~~~~~~~~d~~~~i~~--via~G~d~Va 161 (194)
+..++.++|++||+++|++++.++|+||+++.+|. .+..+.|+++++++|+.++......+++++.+ +...|++.++
T Consensus 14 ~I~~l~~~~~~A~~~~D~~~~~~l~a~d~~~~~~~~~g~~~~G~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~gd~aav 93 (143)
T 2ux0_A 14 EIIKITEQLIEAINNGDFEAYTKICDPGLTSFEPEALGNLVEGMDFHKFYFENLLSKNSKPIHTTILNPHVHVIGEDAAC 93 (143)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCEEEHHHHHHHHHHHTTTTCCSCEEEEEEEEEEEECSTTEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhcCCCcEEEeccCCCcEEEcHHHHHHHHHhhhhcCCCceeEEEeCCEEEEecCcEEE
Confidence 46788999999999999999999999999998764 23578899999999998876443356777655 4445534443
Q ss_pred E-EEEEE--e--CCee--EeeeceEEEEEEEeeCCeEEEC
Q 029353 162 V-TWHLE--W--KGKP--FPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 162 v-~~~~e--~--~Gk~--i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
+ .+.++ . .|.+ ... +...+|+. .||+++|+
T Consensus 94 ~~~~~~~~~~~~~g~~~~~~~-r~T~v~~k--~~g~Wkiv 130 (143)
T 2ux0_A 94 IAYIRLTQYIDGQGRPRTSQS-EETRVWHR--RDGKWLNV 130 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEE-EEEEEEEE--ETTEEEEE
T ss_pred EEEeEeeeeecCCCCeeeeeE-EEEEEEEE--ECCEEEEE
Confidence 3 43333 2 2553 334 57789999 79999985
No 56
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=99.16 E-value=3.2e-10 Score=88.87 Aligned_cols=105 Identities=10% Similarity=0.040 Sum_probs=76.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEE--EEEEEE-ecCCCeEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQF--VIDDIS-AEDSSAVG 161 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~--~i~~vi-a~G~d~Va 161 (194)
...+++.+|+++|+++|++++.++|+||+++.++. +..+.|+++|+++|+..+...+++.++ ++..+. .++ +.+.
T Consensus 17 aI~~~~~~~~~A~~~~D~d~~~~lfa~Da~~~~~~-g~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-d~A~ 94 (172)
T 3cu3_A 17 AIRAFHRQMIDAWNRGSGEGFAAPFSETADFITFE-GTHLKGRKEIAAFHQQAFDTVVKGTRLEGEVDFVRFVNS-QLAL 94 (172)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTT-CCEEEHHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEET-TEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhcCCCeEEEeCC-CCeEECHHHHHHHHHHHhhccCCCcEEEEEEeEEEEeCC-CEEE
Confidence 46789999999999999999999999999998753 357899999999999887653444443 444443 334 5555
Q ss_pred EEEE--EEeCCe-----eEeeeceEEEEEEEeeCCeEEEC
Q 029353 162 VTWH--LEWKGK-----PFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 162 v~~~--~e~~Gk-----~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
+++. +...|. .... +...+|+. .||+++|+
T Consensus 95 v~~~~~~~~~g~~~~~~~~~~-~~t~v~~r--~dG~WrI~ 131 (172)
T 3cu3_A 95 MLVVIRVILPGQTETSASRDS-LPLYVVTK--GDEGWQIE 131 (172)
T ss_dssp EEEEEEEECTTCSSBCGGGCB-CCEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEeCCCCCcCCccce-EEEEEEEE--eCCeEEEE
Confidence 5544 333443 2334 57788888 79988884
No 57
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=99.08 E-value=1.4e-09 Score=83.45 Aligned_cols=105 Identities=10% Similarity=-0.051 Sum_probs=72.6
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEE--EEEEEEecCCCeEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQF--VIDDISAEDSSAVGV 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~--~i~~via~G~d~Vav 162 (194)
...+++.+|++||+++|++++.++|+||+++..|+ ..+.|+++|++++...+...+++..+ +...+..-+++...+
T Consensus 20 ~i~~l~~~y~~A~~~~D~d~~~~lf~~Da~~~~~g--~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~A~v 97 (143)
T 4i4k_A 20 AVAALPARIVAAWADHDADRFADVFAEDGTMILPG--LFRKGRENIRTHMAAAFAGPYKGTRVIGSPIDARLLGDGIALL 97 (143)
T ss_dssp HHHTHHHHHHHHHHTTCHHHHHTTEEEEEEEEETT--EEEESHHHHHHHHHHHHHTTTTTCEEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHhhcCceEEeCC--CeecCHHHHHHHHHHHHhhcCCCCeEEeeeEEEEEcCCCEEEE
Confidence 46788999999999999999999999999998443 57899999999999988765455444 444443323255444
Q ss_pred EEEE--EeCCee-----EeeeceEEEEEEEeeCCeEEEC
Q 029353 163 TWHL--EWKGKP-----FPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 ~~~~--e~~Gk~-----i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
.... ...|.. ... ....+|+- .+|+++|+
T Consensus 98 ~~~~~~~~~g~~~~~~~~~~-~~T~v~~r--~~g~WrI~ 133 (143)
T 4i4k_A 98 ITEGGILAPGETEASGDGAV-RASWLAVE--QDGQWRLA 133 (143)
T ss_dssp EEEEEEECTTCSSCCGGGEE-EEEEEEEE--ETTEEEEE
T ss_pred EeccceecCCCCCCCcccce-EEEEEEEE--ECCcEEEE
Confidence 3222 223332 122 23456776 68999984
No 58
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=99.08 E-value=1.9e-09 Score=83.30 Aligned_cols=105 Identities=11% Similarity=0.117 Sum_probs=73.8
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCC--cEEEEEEEE-ecCCCeEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSD--LQFVIDDIS-AEDSSAVG 161 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d--~~~~i~~vi-a~G~d~Va 161 (194)
...+++.+|.+||+++|++++.+||+||++|.+.+ +..+.|+++|++++...+...+.+ +++....+. .++ |...
T Consensus 7 aI~~l~~~~~~A~~~~D~d~~~~lf~~Da~~~~~~-G~~~~Gr~aI~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-D~A~ 84 (146)
T 3gzr_A 7 AIQALIQAYFTAWNTNAPERFAEIFWPDGSWVNVV-GMHWRGRDQIVFAHTAFLKTIFKDCKQELVTIEARTIAP-GSAL 84 (146)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSGGGEEEEEEEECTT-CCEEESHHHHHHHHHHHHHTTTTTCCEEEEEEEEEEEET-TEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhccCCeEEEcCC-CCeeeCHHHHHHHHHHHhhcccCCCEEEEeEEEEEEcCC-CEEE
Confidence 46789999999999999999999999999998443 357899999999999888755443 344455543 344 5544
Q ss_pred E--EEEEE----eCCeeE---eeeceEEEEEEEeeCCeEEEC
Q 029353 162 V--TWHLE----WKGKPF---PFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 162 v--~~~~e----~~Gk~i---~~t~g~~~fr~~~~dGKI~i~ 194 (194)
+ +|.+. .+|... .. ....+|+- .||+++|+
T Consensus 85 v~~~~~l~g~~~~~G~~~~~~~~-~~t~v~vr--~dg~WrI~ 123 (146)
T 3gzr_A 85 AVVTLIQDAYVTPDGRQMPRAHD-RLTLLAVE--REGVWRFI 123 (146)
T ss_dssp EEEEEEECCEECTTCCEECCEEE-EEEEEEEE--ETTEEEEE
T ss_pred EEEEEEecceeCCCCCcCCccCc-EEEEEEEE--ECCEEEEE
Confidence 4 45442 145543 22 23345555 68999984
No 59
>3mg1_A OCP, orange carotenoid protein; carotenoid binding protein, echinone, phycobilisome; HET: ECH; 1.65A {Synechocystis SP} PDB: 3mg2_A* 3mg3_A* 1m98_A*
Probab=99.07 E-value=3.2e-10 Score=97.92 Aligned_cols=100 Identities=20% Similarity=0.366 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEE----EEecCCCeEEE
Q 029353 87 AVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDD----ISAEDSSAVGV 162 (194)
Q Consensus 87 ~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~----via~G~d~Vav 162 (194)
..+|.+|++.+|++|.+++.+||++|.+.++|.. .++.|+|+|.+|++.- + .+++.+... ...+|.+.+.+
T Consensus 195 ~~tVl~Y~e~lNa~Df~a~aaLFA~Dg~LepPf~-~PIvGreAI~~y~~~e---a-q~~~l~P~~g~~ep~e~g~~qi~v 269 (323)
T 3mg1_A 195 NATVLNYMDNLNANDFDTLIELFTSDGALQPPFQ-RPIVGKENVLRFFREE---C-QNLKLIPERGVTEPAEDGFTQIKV 269 (323)
T ss_dssp CHHHHHHHHHHHTTCHHHHHTTEEEEEEEECTTS-CCEESHHHHHHHHHHH---C-TTCEEEEEEEEEEECGGGCEEEEE
T ss_pred hHHHHHHHHHhcccCHHHHHHHccCCCeeCCCCC-CCccCHHHHHHHHHHH---h-ccCEEeeccCccccccCCCceEEE
Confidence 5789999999999999999999999999998876 6999999999999963 3 347787766 33445455666
Q ss_pred EEEE--EeCCeeEeeeceEEEEEEEeeCCeEEE
Q 029353 163 TWHL--EWKGKPFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 163 ~~~~--e~~Gk~i~~t~g~~~fr~~~~dGKI~i 193 (194)
.... .|.|..+.+ +..+.|+|++ +|||.-
T Consensus 270 tGkVqTpwfGv~v~m-nVaW~F~lN~-~gkI~~ 300 (323)
T 3mg1_A 270 TGKVQTPWFGGNVGM-NIAWRFLLNP-EGKIFF 300 (323)
T ss_dssp EEEEECTTTGGGCCE-EEEEEEEECT-TSCEEE
T ss_pred EEEEEcccCCccccc-cceeEEEECC-CCcEEE
Confidence 4443 577998888 7899999996 999963
No 60
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=99.02 E-value=8.7e-09 Score=79.33 Aligned_cols=102 Identities=14% Similarity=0.201 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEE--EecCCCeEEEEE
Q 029353 87 AVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI--SAEDSSAVGVTW 164 (194)
Q Consensus 87 ~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~v--ia~G~d~Vav~~ 164 (194)
.++++--=.++++||++++.++|+||+++.||..+..+.|.++++.||+.+... ...++++.+. ...| |..++.|
T Consensus 17 ~~i~~~~~~~L~~gD~~~~~~lyapDvt~fDp~~~~~~~G~~a~r~yf~~~~~~--~~~~~ei~~p~V~v~g-D~A~~~y 93 (134)
T 3ke7_A 17 EMIISLEKEALASTDPMAFVELSDTDVIYFDPSLETKIEGLEQLRTYYKGMQLP--PADHFDMIRPVVQVAQ-NIAVLTF 93 (134)
T ss_dssp HHHHHHHHHHHHCSCTTHHHHHEEEEEEEECTTCSSCEESHHHHHHHHHHHCCC--CCSEEEEEEEEEEEET-TEEEEEE
T ss_pred HHHHHHhHHHHhCCCHHHHHHhcCCCEEEEcCCCccccCCHHHHHHHHHhcccC--CcceEEEeCCeEEEeC-ceEEEEE
Confidence 444444445889999999999999999999998777799999999999974322 3357777654 3444 6666666
Q ss_pred EEE--eCCeeEeeeceEEEEEEEee-CCeEEEC
Q 029353 165 HLE--WKGKPFPFSKGCSFYKLEVV-NGKRQIT 194 (194)
Q Consensus 165 ~~e--~~Gk~i~~t~g~~~fr~~~~-dGKI~i~ 194 (194)
.+. ..|....+ +...+|+. + ||+++|+
T Consensus 94 ~l~~~~~~~~~~~-r~T~V~~r--~~dG~W~iv 123 (134)
T 3ke7_A 94 NLDSYLSDKVIKW-NCTEVYRR--NPDNQWKII 123 (134)
T ss_dssp EEEEEETTEEEEE-EEEEEEEE--CTTSBEEEE
T ss_pred EEEEeeCCCcEEE-EEEEEEEE--cCCCcEEEE
Confidence 653 34556666 88999999 8 9999985
No 61
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=98.99 E-value=4.2e-09 Score=80.49 Aligned_cols=106 Identities=18% Similarity=0.113 Sum_probs=74.8
Q ss_pred CCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHH-HHHHhhhhcCCCcEEEEEE--EEecCCCe
Q 029353 83 DGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLD-FFKKFSDSISSDLQFVIDD--ISAEDSSA 159 (194)
Q Consensus 83 ~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~-~~~~~~~~~~~d~~~~i~~--via~G~d~ 159 (194)
.....+++.+|++|++++|++++.++|+||+++.++.. ...|++++++ .|...+... ....+++.+ +...| +.
T Consensus 29 ~~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da~~~~~~g--~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~g-d~ 104 (148)
T 3bb9_A 29 DSAAGNVVKQFHAALQMGNEAIVRQSLAANVQIYEGGK--VERSLTEYANHHMLADMAYL-KGLTITPKEHQITITG-DI 104 (148)
T ss_dssp TSHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEETTE--EECSHHHHHHTHHHHHHHHH-HTEEEEEEEEEEEEET-TE
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHhhCCCeEEEeCCC--ccCCHHHHHHHhHHHHHHhc-cCceEEeeeEEEEEcC-CE
Confidence 45688999999999999999999999999999886653 4889999999 887766532 335666544 44556 55
Q ss_pred EEEEE--EEEe--CCeeEee-eceEEEE-EEEeeCCeEEEC
Q 029353 160 VGVTW--HLEW--KGKPFPF-SKGCSFY-KLEVVNGKRQIT 194 (194)
Q Consensus 160 Vav~~--~~e~--~Gk~i~~-t~g~~~f-r~~~~dGKI~i~ 194 (194)
+.+.+ .... .|+++.. .+...+| +- .||+++|+
T Consensus 105 A~~~~~~~~~~~~~G~~~~~~~r~T~v~~~k--~~g~WkIv 143 (148)
T 3bb9_A 105 AISTSISHAQGEYKGKSIDSMTMETLVLIKQ--ADGRWKIT 143 (148)
T ss_dssp EEEEEEEEEEECCC--CEEEEEEEEEEEEEC--TTSCEEEE
T ss_pred EEEEEEEEEeeeeCCcccccceEEEEEEeEE--cCCcEEEE
Confidence 44443 3322 3655432 1457788 77 78999985
No 62
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=98.92 E-value=2.1e-08 Score=74.34 Aligned_cols=105 Identities=17% Similarity=0.103 Sum_probs=73.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhh--cCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcC--CCcEEEEEEEEecCCCeE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELI--ADDCVYEDLIFPRPFLGRKATLDFFKKFSDSIS--SDLQFVIDDISAEDSSAV 160 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~--ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~--~d~~~~i~~via~G~d~V 160 (194)
+.++++++|++|||++|+++++++| +||+++.++. +...|++++++.+...|.... ..++++..++..-+++..
T Consensus 6 ~I~~~~~~~~~A~~~~D~~~~~~~y~~~~d~~~~~~~--~~~~G~~~i~~~~~~~f~~~~~~~~l~~~~~~~~~~~~~~a 83 (122)
T 3b7c_A 6 DIVQLLKGQEEAWNRGDLDAYMQGYWQNEQLMLISNG--KFRNGWDETLAAYKKNYPDKESLGELKFTIKEIKMLSNYAA 83 (122)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCCSTTCEEECSS--CEEECHHHHHHHHHHHCSSGGGSCEEEEEEEEEEEEETTEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCCCEEEECCC--ccccCHHHHHHHHHHhcCChhhcCeeEEEEEEEEEcCCCEE
Confidence 4678999999999999999999999 8999998764 478999999998887664321 235666655543232443
Q ss_pred EE--EEEEEeCCeeEeeeceEEEEEEEeeCCeEEEC
Q 029353 161 GV--TWHLEWKGKPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 161 av--~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
.+ +|++......... +...+|+- .+|+++|+
T Consensus 84 ~v~~~~~~~~~~~~~~~-r~T~v~~k--~~g~W~Iv 116 (122)
T 3b7c_A 84 MVVGRWDLKRLKDTPTG-VFTLLVEK--IDDRWVIT 116 (122)
T ss_dssp EEEEEEEEECSSCCCEE-EEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEEccCCCCCc-EEEEEEEE--eCCCEEEE
Confidence 33 4554332112223 45678888 78999885
No 63
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=98.79 E-value=1.3e-07 Score=73.36 Aligned_cols=104 Identities=12% Similarity=-0.019 Sum_probs=72.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEE-EEEEEecCCCeEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFV-IDDISAEDSSAVGVT 163 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~-i~~via~G~d~Vav~ 163 (194)
...+++.+|+.+++.+|++.+.++|+||+++..|+ ++..|+++++++++..+.. ....++. ...+..+| +.+.++
T Consensus 15 ~I~~l~~~y~~a~D~~D~~~~~~lf~~Da~~~~~g--~~~~G~~~i~~~~~~~~~~-~~~~h~~~~~~i~~~g-d~A~~~ 90 (170)
T 2chc_A 15 RIQALCARYCLTINTQDGEGWAGCFTEDGAFEFDG--WVIRGRPALREYADAHARV-VRGRHLTTDLLYEVDG-DVATGR 90 (170)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETT--EEEESHHHHHHHHHHHHHH-CCCCEEEEEEEEEEET-TEEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHhcccCcEEEEeCC--CCcCCHHHHHHHHHHhhcc-cceEEecCCeEEEEeC-CEEEEE
Confidence 46789999999999999999999999999998764 4789999999999987754 2222322 22233455 665555
Q ss_pred EEEE-----eCCeeEee-eceEEEEEEEeeCCeEEEC
Q 029353 164 WHLE-----WKGKPFPF-SKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 164 ~~~e-----~~Gk~i~~-t~g~~~fr~~~~dGKI~i~ 194 (194)
+.+. .+|..+.. .+..+.|+. .||+++|.
T Consensus 91 ~~~~~~~~~~~g~~~~~~g~y~d~~~r--~dg~Wri~ 125 (170)
T 2chc_A 91 SASVVTLATAAGYKILGSGEYQDRLIK--QDGQWRIA 125 (170)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEcCCCCEEEEEEEEEEEEEE--ECCEEEEE
Confidence 5542 13543322 145677777 79988884
No 64
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=98.78 E-value=5.4e-08 Score=72.67 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCe--EEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDC--VYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~--v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
..+++.+|.+|++.+|+++|.++|++|. +...+ ++.+.|+++|++ |+..+.......+.....+..-|++.+.+.
T Consensus 16 i~~~~~~y~~A~~~~D~~~l~~lf~~d~~~~~~~~--~~~~~G~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~d~A~~~ 92 (129)
T 2rcd_A 16 VTAAFYRYEKALTGNDVAVLDELFWHDEKTVRYGA--GENLYGIEEIRA-FRLARPSAGLDRALRNTVITTYGHDMAVAS 92 (129)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHBCCSTTCEEEET--TEEEESHHHHHH-HHHHSCCTTCCCEEEEEEEEEBTTSEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhccCCCCEEEECC--CCccCCHHHHHH-HHHhcCCCCCceEEEEEEEEEecCcEEEEE
Confidence 4556667779999999999999999994 33332 346889999999 887775433444544444555553544444
Q ss_pred EEEEeCCeeEeeeceEEEEEEEeeCCeEEEC
Q 029353 164 WHLEWKGKPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 164 ~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
..+...|..... +...+|+- .+|.++|+
T Consensus 93 ~~~~~~~~~~~g-~~t~v~~r--~~~gWrIv 120 (129)
T 2rcd_A 93 TEFTRTGSTKIG-RQMQTWVK--MPEGWRIV 120 (129)
T ss_dssp EEEECSSCCSCE-EEEEEEEE--ETTEEEEE
T ss_pred EEEEEcCCCCce-eEEEEEEE--CCCcEEEE
Confidence 444333222222 34577777 68889885
No 65
>1tp6_A Hypothetical protein PA1314; structural genomics, alpha-beta sandwich, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.12
Probab=98.69 E-value=1.6e-07 Score=71.03 Aligned_cols=95 Identities=13% Similarity=0.056 Sum_probs=68.3
Q ss_pred HHHHHHHHhC---C--CHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe---cCCCeEE
Q 029353 90 VRRFYAGING---R--DLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA---EDSSAVG 161 (194)
Q Consensus 90 Vr~fyeA~n~---g--D~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via---~G~d~Va 161 (194)
++.+++.|++ + |+++++++|+||+++..| .|...|+++++++|...+.. +|+++++++++.. ++ +.++
T Consensus 12 ~~~~ie~W~~~~~~~~dl~~l~a~~a~d~~mv~p--~G~~~g~~~~~~~~~~~~g~-~pgl~i~i~~l~~~~~~~-d~~v 87 (128)
T 1tp6_A 12 AHVAIRDWLAGDSRADALDALMARFAEDFSMVTP--HGVVLDKTALGELFRSKGGT-RPGLRIEIDGESLLASGV-DGAT 87 (128)
T ss_dssp HHHHHHHHHHTCCCTTHHHHHHTTEEEEEEEECT--TSCEEEHHHHHHHHHHHTTC-STTCEEEEEEEEEEEEET-TEEE
T ss_pred HHHHHHHHHcCCCcHhHHHHHHHhcCCCEEEECC--CCeECCHHHHHHHHHHhhCC-CCCeEEEEEEEEEEeecC-CEEE
Confidence 4444555544 4 899999999999999865 35789999999999988864 6899999998866 45 7777
Q ss_pred EEEEE--EeCCeeEeeeceEEEE-EEEeeCCeE
Q 029353 162 VTWHL--EWKGKPFPFSKGCSFY-KLEVVNGKR 191 (194)
Q Consensus 162 v~~~~--e~~Gk~i~~t~g~~~f-r~~~~dGKI 191 (194)
++|.- ..+|..-.- +-..+| +. .+||+
T Consensus 88 v~y~~~~~~~~~~~~r-rsT~v~~~~--~~g~~ 117 (128)
T 1tp6_A 88 LAYREIQSDAAGRSER-LSTVVLHRD--DEGRL 117 (128)
T ss_dssp EEEEEEEEETTEEEEE-EEEEEEEEC--TTCCE
T ss_pred EEEEEEeccCCceeEE-EEEEEEEeC--CCCCE
Confidence 77654 123433222 356777 44 47864
No 66
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=98.68 E-value=2.8e-07 Score=71.02 Aligned_cols=107 Identities=11% Similarity=0.160 Sum_probs=71.5
Q ss_pred CcHHHHHHHHHHHHhC-CCHHHHHhhhcCCeEEEcCCCC-CCccCHHHHHHHHHHhhhhcCCCcEEEEE--EEE-ecCCC
Q 029353 84 GGGAVVVRRFYAGING-RDLASVEELIADDCVYEDLIFP-RPFLGRKATLDFFKKFSDSISSDLQFVID--DIS-AEDSS 158 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~-gD~dal~~L~ApD~v~~dp~~~-g~~~Greair~~~~~~~~~~~~d~~~~i~--~vi-a~G~d 158 (194)
.+..+++.+|+.+++. +|++.+.++|+||+++..++.+ ..+.|+++++++++..+... +.....+. .+. .+| +
T Consensus 28 ~~I~~l~~~y~~alD~~~D~d~~~~lfteDa~~~~~~~g~~~~~G~~~i~~~~~~~~~~~-~~~~h~~~~~~I~~~~g-d 105 (163)
T 3b8l_A 28 LAIQDLMIAYAHAVDTVSDIDAVLDVFTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANM-SHHAHYLTNFAVTGYEG-D 105 (163)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHTTEEEEEEEECGGGTCCCEEHHHHHHHHHHHHHHHE-EEEEEEEEEEEEEEECS-S
T ss_pred HHHHHHHHHHHHHHCcCCCHHHHHhhcCCCEEEEecCCCCCCccCHHHHHHHHHHhhccC-CceEEEecCEEEEEeCC-C
Confidence 3477889999999999 9999999999999999865432 26899999999999876432 33223332 232 345 5
Q ss_pred eEEEEEEEE---e--CCeeEee-eceEEEEEEEeeCCeEEEC
Q 029353 159 AVGVTWHLE---W--KGKPFPF-SKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 159 ~Vav~~~~e---~--~Gk~i~~-t~g~~~fr~~~~dGKI~i~ 194 (194)
.+.+++.+. . .|.+... .+..+.|+- .||+++|.
T Consensus 106 ~A~~~~~~~~~~~~~~g~~~~~~g~y~d~~~r--~dg~WrI~ 145 (163)
T 3b8l_A 106 TASMRAYVIGMGVGKDGRAVTVNGRYFFEVRR--TEKGWKAT 145 (163)
T ss_dssp EEEEEEEEEEEEEETTSCEEEEEEEEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEEEEEEcCCCCeEEEEEEEEEEEEE--eCCEEEEE
Confidence 555544332 1 2444322 134566666 78988884
No 67
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=98.65 E-value=2e-07 Score=74.43 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=71.7
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeE-----------------EEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCV-----------------YEDLIFPRPFLGRKATLDFFKKFSDSISSDLQF 147 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v-----------------~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~ 147 (194)
...++..+||+||+++|+++|.+++++|.. +..|+ +..+.|+++|++.|+.+|... +.+++
T Consensus 13 ~I~~~~~~~~~A~~~gD~~~l~alwa~d~~~~~~~~~~~~~~~~~v~~v~Pg-~~~l~G~~~I~~~~~~~f~~~-~~~~~ 90 (170)
T 3cnx_A 13 QVGLANTAFYEAMERGDFETLSSLWLTPADLGVDEEYHDPADAGVVSCVHPG-WPVLSGRGEVLRSYALIMANT-EYIQF 90 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHHHHTC------CCCTTCCEEECTT-CCEEEHHHHHHHHHHHHHHTC-SEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCcccccccccccccccccEEEEcCC-CccccCHHHHHHHHHHHHccC-CeeEE
Confidence 467889999999999999999999999953 33343 246899999999999988753 44677
Q ss_pred EEEEEE--ecCCCeEEE--EEEEEeC----------CeeE--eeeceEEEEEEEeeCCeEEEC
Q 029353 148 VIDDIS--AEDSSAVGV--TWHLEWK----------GKPF--PFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 148 ~i~~vi--a~G~d~Vav--~~~~e~~----------Gk~i--~~t~g~~~fr~~~~dGKI~i~ 194 (194)
++.++. ..| +...+ .+++... |... .+ +...+|+- .+|+++|+
T Consensus 91 ~~~dv~v~~~g-D~A~v~~~~~~~~~~~~~~g~~~~g~~~~~~~-raT~Vfrr--~~ggWriv 149 (170)
T 3cnx_A 91 FLTDVHVSVTG-DTALVTCTENILSGGPPPDDSDELGPLVGQLV-VATNVFRR--TPDGWKLW 149 (170)
T ss_dssp EEEEEEEEEET-TEEEEEEEEEEEEEC---------CCCEEEEE-EEEEEEEC--CTTCCEEE
T ss_pred EEEEEEEEEeC-CEEEEEEEEEEeccCCccccccccCccccceE-EEEEEEEE--ECCEEEEE
Confidence 665543 455 54444 3333321 1111 13 46789988 78888874
No 68
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=98.64 E-value=1.1e-06 Score=66.66 Aligned_cols=105 Identities=11% Similarity=0.051 Sum_probs=70.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE--ecCCCeEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSAVGV 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi--a~G~d~Vav 162 (194)
+..+++.+|..+++.+|++.+.+||+||++|..|. ++..|++++++++...+....+..+..+..+. .+| +.+.+
T Consensus 11 ~I~~l~~rya~~lD~~d~~~~~~lft~Da~~~~~~--g~~~g~~~i~~~~~~~~~~~~~~t~H~i~n~~i~~~~-d~a~~ 87 (144)
T 2rgq_A 11 EIMELAARFEMSLDKEDVENYLATFASDGALQGFW--GIAKGKEELRQGFYAMLDTFARGKRHCSSNAIIQGNY-DEATM 87 (144)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETT--EEEESHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECS-SEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHhhccCcEEEEcCC--CCCCCHHHHHHHHHHHHhhCCCCcEEecCCeEEEEeC-CEEEE
Confidence 46788999999999999999999999999998763 45689999999998776543222333343332 334 55444
Q ss_pred EEEEE--e-CC-eeEeeeceEEEEEEEeeCCeEEEC
Q 029353 163 TWHLE--W-KG-KPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 ~~~~e--~-~G-k~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
++.+. . .+ ..+...+..+.|+. .||.++|.
T Consensus 88 ~~~~~~~~~~~~~~~~~g~y~d~~~r--~dg~Wri~ 121 (144)
T 2rgq_A 88 ESYLTVVNREDLNRAGSAFVKDQVRK--INGKWYLI 121 (144)
T ss_dssp EEEEEEEESSSSCEEEEEEEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEecCCeEEEEEEEEEEEEE--ECCEEEEE
Confidence 44332 1 11 22222134566666 78988873
No 69
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=98.59 E-value=5.9e-07 Score=68.16 Aligned_cols=105 Identities=12% Similarity=0.098 Sum_probs=68.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCc-cCHHHHHHHHHHhhhhc--CCCcEEEE--EEEEecCCCe
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPF-LGRKATLDFFKKFSDSI--SSDLQFVI--DDISAEDSSA 159 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~-~Greair~~~~~~~~~~--~~d~~~~i--~~via~G~d~ 159 (194)
+..+++.+|+.+++.+|++.+.++|+||+++..|. +++ .|++++++++....... .+.....+ ..+..+| +.
T Consensus 20 ~I~~l~~~y~~a~D~~d~~~~~~lf~~Da~~~~~~--g~~~~G~~~i~~~~~~~~~~~~~~~~~~h~~~~~~i~~~g-d~ 96 (155)
T 2rfr_A 20 EIRELIARYGPLADSGDAEALSELWVEDGEYAVVG--FATAKGRAAIAALIDGQTHRALMADGCAHFLGPATVTVEG-DT 96 (155)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEETT--SCCEESHHHHHHHHHSHHHHHHHHHCEEEEECCCEEEEET-TE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhcCCceEEEcCC--CccccCHHHHHHHHHhccccccCCCceeEeCCCeEEEEeC-CE
Confidence 46788999999999999999999999999998775 356 99999999998654311 01122222 1222345 66
Q ss_pred EEEEEEEEe----CCe-eEe-eeceEEEEEEEeeCCeEEEC
Q 029353 160 VGVTWHLEW----KGK-PFP-FSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 160 Vav~~~~e~----~Gk-~i~-~t~g~~~fr~~~~dGKI~i~ 194 (194)
+.+++.+.. .|. .+. .....+.|+- .||+++|.
T Consensus 97 A~~~~~~~~~~~~~~~~~~~~~g~y~d~~~r--~~g~Wri~ 135 (155)
T 2rfr_A 97 ATARCHSVVFRCVSGTFGSHRVSANRWTFRR--TPAGWRAV 135 (155)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEEEEEcCCCceEEEeeeeEEEEEE--CCCEEEEE
Confidence 656555422 232 221 1112345555 68999884
No 70
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=98.58 E-value=8e-07 Score=67.40 Aligned_cols=103 Identities=8% Similarity=0.044 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeE--EEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCV--YEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v--~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
..+++.+|++|++.+|+++|.+||++|.. .. ++ ++.+.|.++|++|...+. ...+..++.-..+...|+|.+.+.
T Consensus 13 I~~~~~~y~~Al~~~D~~~L~~lf~~d~~~v~~-~~-g~~l~G~~~I~a~r~~~~-~~~~~~~~~~~~i~~~g~d~A~~~ 89 (129)
T 2owp_A 13 VQAAFVEYERALVENDIEAMNALFWHTPETVRY-GI-AEVQHGGEAIRAWRERCE-PVPKSRKLHRTVVTTFGTDFATVS 89 (129)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTBCCSTTCEEE-CS-SCEEESHHHHHHHHHHSC-CCCTTCEEEEEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHhCCHHHHHhhccCCCcEEEe-CC-CCccCCHHHHHHHHHhcC-CCCCceeecccEEEEecCCEEEEE
Confidence 56778888999999999999999999963 34 43 568899999999666443 333444443334444553555444
Q ss_pred EEEEeCCeeEeeeceEEEEEEEeeC--CeEEEC
Q 029353 164 WHLEWKGKPFPFSKGCSFYKLEVVN--GKRQIT 194 (194)
Q Consensus 164 ~~~e~~Gk~i~~t~g~~~fr~~~~d--GKI~i~ 194 (194)
..+...|..... +...+|+- .+ +.++|+
T Consensus 90 ~~~~~~~~~~~g-r~t~vw~r--~~~~~gWrIv 119 (129)
T 2owp_A 90 TEFTSDATPLLG-RQMQTWAR--LSPADGWKIV 119 (129)
T ss_dssp EEEEETTEEEEE-EEEEEEEE--CSTTTCEEEE
T ss_pred EEEEECCCCcce-EEEEEEEE--CCCCCCEEEE
Confidence 334344554333 45677766 46 778774
No 71
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=98.56 E-value=5.7e-07 Score=70.85 Aligned_cols=107 Identities=9% Similarity=0.011 Sum_probs=71.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHH-HHhhhhcCCCcEEEEEE--EEecCCCeE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFF-KKFSDSISSDLQFVIDD--ISAEDSSAV 160 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~-~~~~~~~~~d~~~~i~~--via~G~d~V 160 (194)
.+.++++.+|..+++.+|++.+.++|+||++|.-+.. +++.|++++++++ ...+.. ++..+..+.. +..+|++.+
T Consensus 31 ~~I~~ll~ry~~alD~~d~d~~~~lfteDa~~~~~~~-g~~~G~~~i~~~~~~~~~~~-~~~t~H~i~n~~I~~~g~d~A 108 (176)
T 3a76_A 31 AAIQDLYSDKLIAVDKRQEGRLASIWWDDAEWTIEGI-GTYKGPEGALDLANNVLWPM-FHECIHYGTNLRLEFVSADKV 108 (176)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEETTT-EEEEHHHHHHHHHHHTHHHH-EEEEEEEEEEEEEEESSSSEE
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHhhccCCeEEEcCCC-ccccCHHHHHHHHHHhhhcc-cCceEEecCCeEEEEcCCCeE
Confidence 3467889999999999999999999999999976553 4689999999999 655433 2333333333 333443555
Q ss_pred EEEE--EEEe----CCeeEee-eceEEEEEEEeeCCeEEEC
Q 029353 161 GVTW--HLEW----KGKPFPF-SKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 161 av~~--~~e~----~Gk~i~~-t~g~~~fr~~~~dGKI~i~ 194 (194)
.+++ .+.. .|..+.. .+..+.|+. .||+++|.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~gry~d~l~r--~dg~WrI~ 147 (176)
T 3a76_A 109 NGIGDVLLLGNLVEGNQSILIAAVFTDEYER--RDGVWKFS 147 (176)
T ss_dssp EEEEEEEEEEEETGGGEEEEEEEEEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEEEEecCCCceEEEEEEEEEEEEE--ECCEEEEE
Confidence 5544 2211 2333322 145666777 79988883
No 72
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=98.55 E-value=3.1e-07 Score=70.97 Aligned_cols=104 Identities=10% Similarity=0.095 Sum_probs=72.2
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC-CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEE--EEecCCCeEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLI-FPRPFLGRKATLDFFKKFSDSISSDLQFVIDD--ISAEDSSAVG 161 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~-~~g~~~Greair~~~~~~~~~~~~d~~~~i~~--via~G~d~Va 161 (194)
+..+++++|.+|+++||++++.++++||+++.+|. .+..+.|.+.++.||+.. .....++++.+ +...|++.++
T Consensus 13 eI~~~~~~~~~Ai~~gD~~~~~~l~~~dv~~Fd~~~~g~~~~g~~~~r~~f~~~---~~~~~~~~~~~~~V~~~g~d~Av 89 (143)
T 2f86_B 13 DIVRVTQTLLDAISCKDFETYTRLCDTSMTCFEPEALGNLIEGIEFHRFYFDGN---RKNQVHTTMLNPNVHIIGEDAAC 89 (143)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECGGGTTCCEETTHHHHTTSSSC---SCCSCEEEEEEEEEEEETTTEEE
T ss_pred HHHHHHHHHHHHHHccCHHHHHHhcCCCEEEEccCcCCccccCHHHHHHHHhcc---cCCcceeEEEcceEEEeCCCEEE
Confidence 36788999999999999999999999999999873 344688999988665421 11234555543 3344524443
Q ss_pred EEEEE--E---eCCeeEe--eeceEEEEEEEeeCCeEEEC
Q 029353 162 VTWHL--E---WKGKPFP--FSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 162 v~~~~--e---~~Gk~i~--~t~g~~~fr~~~~dGKI~i~ 194 (194)
+.+.. . .+|+++. . +...+|+. .+|+++|+
T Consensus 90 ~~y~~~~~~~~~~G~~~~~~~-r~T~V~~k--~~g~Wkiv 126 (143)
T 2f86_B 90 VAYVKLTQFLDRNGEAHTRQS-QESRVWSK--KQGRWVCV 126 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEE-EEEEEEEE--ETTEEEEE
T ss_pred EEEEeeeeeccCCCCeeeEEE-EEEEEEEE--eCCcEEEE
Confidence 34322 1 1476553 4 67889999 89999985
No 73
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=98.46 E-value=2.3e-06 Score=63.91 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=64.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCC--ccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRP--FLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGV 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~--~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav 162 (194)
..++++.+|+++++.+|.+.|.++|+||+++.....++. ....+++.+++...+. ..+....++..+-..| +...+
T Consensus 13 aI~~~~~~y~~a~~~~D~~~l~~~f~~da~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~i~i~g-d~A~a 90 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTGGPIQGLFDVIDNVFH-PSPEAKAAIARIDIVG-TAASA 90 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEEEEEECTTSCEEEEETHHHHHHHHHTCC-CCTTCEEEEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCcEEEEEeCCCcEEecCHHHHHHHHHhcCC-CCccccCeEEEEEEEC-CEEEE
Confidence 478899999999999999999999999999864321222 2233444444432211 2354555566665667 66666
Q ss_pred EEEE-EeCCeeEeeeceEEEEEEEeeCCeEEEC
Q 029353 163 TWHL-EWKGKPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 ~~~~-e~~Gk~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
++.. .+.|..+ .+.|++.-+||+++|+
T Consensus 91 ~~~~~~~~~~~~-----~d~~~l~k~dg~WkI~ 118 (128)
T 3blz_A 91 RIDTDDISGFRF-----TDFFNLLKVEGKWTVV 118 (128)
T ss_dssp EEEEEEETTEEE-----EEEEEEEEETTEEEEE
T ss_pred EEEEEEcCCCce-----EEeEEEEEECCEEEEE
Confidence 6666 4555443 2333332248999984
No 74
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=98.45 E-value=2.9e-06 Score=61.33 Aligned_cols=105 Identities=11% Similarity=0.089 Sum_probs=68.7
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE-
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT- 163 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~- 163 (194)
+..++.++|++|+.++|++++.+|++||+++..|. |...|++++.+.+..-. .....+.+.-..+..-|++.+.+.
T Consensus 7 ~i~~l~~~~~~A~~~~D~~~l~~l~~~d~~~~~~~--G~~~~~~~~i~~~~~~~-~~~~~~~~~~~~v~~~g~~a~~~~~ 83 (123)
T 2r4i_A 7 VILDCEKKLLTAIQNNDVESLEVLLHDDLLFIIPS--GETVTKETDIAAYSSGK-IALRAVVPSDYIIRIIHDTVVVSVN 83 (123)
T ss_dssp HHTHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTT--SCEECHHHHHHHHHTTC-EEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHhhhCcCeEEECCC--CCCccHHHHHHHHhcCC-eEEEEEeecccEEEEECCEEEEEEE
Confidence 35678999999999999999999999999998874 46779988776665311 011223333333444453343333
Q ss_pred EEEE--eCCeeEee-eceEEEEEEEeeCCeEEEC
Q 029353 164 WHLE--WKGKPFPF-SKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 164 ~~~e--~~Gk~i~~-t~g~~~fr~~~~dGKI~i~ 194 (194)
++.. ..|.+... .+...+|+. .+|+++|+
T Consensus 84 ~~~~~~~~g~~~~~~~r~t~vw~r--~~g~W~iv 115 (123)
T 2r4i_A 84 IEIKGEYMEHTLDNTFRYLRVWKL--FDGNWKVI 115 (123)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEE--ETTEEEEE
T ss_pred EEEEEEECCcceeEEEEEEEEEEE--eCCeEEEE
Confidence 5542 35655322 045789999 79999985
No 75
>3gzb_A Putative snoal-like polyketide cyclase; YP_001182657.1, STRU genomics, joint center for structural genomics, JCSG; HET: MSE; 1.44A {Shewanella putrefaciens} PDB: 3lza_A*
Probab=98.42 E-value=1.3e-05 Score=61.56 Aligned_cols=106 Identities=16% Similarity=0.330 Sum_probs=84.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEE-
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGV- 162 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav- 162 (194)
+...++..+|.+||..+|...|..+|+.|-||.|-..++.+.|+..|.+|+++.-... -++.|-++..+..| ..|+.
T Consensus 20 P~EqqlA~~Yi~AlT~hDy~~L~~FynrdsVf~D~ta~~~YtG~r~Ii~Fl~RaH~gv-Ley~fnieHmfnsG-sLVVmi 97 (154)
T 3gzb_A 20 PQEQQLAVKYMDALTEHDYKTLITFYNRDSIFFDKTANRKYTGGRFIIDFLERAHQGV-LEYDFNIEHMYNAG-SLVVMI 97 (154)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHTTCCTTCEEEETTTTEEEESHHHHHHHHHHHTTTC-CCCEEEEEEEEEET-TEEEEE
T ss_pred cHHHHHHHHHHHHHhccCHHHHHHHhCccceeeeeccCcceeCcHHHHHHHHHHhhhh-eeeccChhhhccCC-cEEEEE
Confidence 4456788999999999999999999999999999998889999999999999876544 56889999999999 66554
Q ss_pred -EEEE--EeC--C---ee--EeeeceEEEEEEEeeCCeEE
Q 029353 163 -TWHL--EWK--G---KP--FPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 163 -~~~~--e~~--G---k~--i~~t~g~~~fr~~~~dGKI~ 192 (194)
.+++ ... | |- +.+ .|+...++|..+-|++
T Consensus 98 GnY~~kGPg~qfgkpGkiId~ai-PGVTtlklDm~~~Rv~ 136 (154)
T 3gzb_A 98 GNYHFKGPGEQFGKPGKIIDVAI-PAVTSLKLDMLNRRVT 136 (154)
T ss_dssp EEEEEEEEEGGGTEEEEEEEEEE-EEEEEEEEETTTTEEE
T ss_pred cceeecCchHHcCCCCceEEEec-CceEEEeecCCccchh
Confidence 3333 322 3 33 556 5999999987444664
No 76
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=98.36 E-value=6.8e-06 Score=61.55 Aligned_cols=105 Identities=18% Similarity=0.210 Sum_probs=70.5
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
....++.++|++|+.++|++++.+|++||+++..+. |...+++++.+.+..-... ...+.+....+..-|++.+.+.
T Consensus 14 ~~I~~l~~~~~~A~~~~D~~~l~~L~~~d~~~v~~~--G~~~~~~~~l~~~~~g~~~-~~~~~~~~~~v~~~g~d~Avv~ 90 (134)
T 3fsd_A 14 DDIAFYEERLRAAMLTGDLKGLETLLADDLAFVDHT--GCVKTKQTHLEPYRAGLLK-LSRLDLSDAVVRAAGEDGRVVV 90 (134)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTT--SCEECHHHHHHHHHTTCEE-EEEEEEEEEEEEESSTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCC--CcCccHHHHHHHHHcCCce-EEEEEEeccEEEEeCCCEEEEE
Confidence 458899999999999999999999999999998764 3566777766655521101 1223333345555663344443
Q ss_pred EEE----EeCCeeE--eeeceEEEEEEEeeCCe--EEEC
Q 029353 164 WHL----EWKGKPF--PFSKGCSFYKLEVVNGK--RQIT 194 (194)
Q Consensus 164 ~~~----e~~Gk~i--~~t~g~~~fr~~~~dGK--I~i~ 194 (194)
+.. ..+|++. .+ +...+|+- .+|+ ++|+
T Consensus 91 ~~~~~~~~~~g~~~~~~~-~~t~vw~k--~~g~~gWriv 126 (134)
T 3fsd_A 91 VRAVTAGVYDGEAFTETL-RFTRIWRR--TQGPAGWKLV 126 (134)
T ss_dssp EEEEEEEEETTEEEEEEE-EEEEEEEE--ETTTTEEEEE
T ss_pred EEEEEEEEeCCcEEEEEE-EEEEEEEE--CCCCccceEe
Confidence 333 2357664 33 46799998 7999 9985
No 77
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=98.31 E-value=6.7e-06 Score=61.75 Aligned_cols=101 Identities=17% Similarity=0.167 Sum_probs=68.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCC-c--cCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRP-F--LGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVG 161 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~-~--~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Va 161 (194)
..++++.+|++++.++|++.|.++|+||++..... .|. + ...+++.+++..- . ..++.+..+..+-..| +...
T Consensus 13 aI~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~-~G~~l~~~~~~e~~~~v~~~-~-p~~~~~~~I~~I~i~g-d~A~ 88 (125)
T 3duk_A 13 GITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYV-GDKLAFNGPIKDLYDWHNSN-G-PAKNVQSRITNIDIVG-TVAH 88 (125)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEE-TTEEEEEEETHHHHHHHHHH-C-CCTTCEEEEEEEEEET-TEEE
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEc-CCCEEeeCCHHHHHHHHhcc-C-CCCcccceEEEEEEEC-CEEE
Confidence 46789999999999999999999999999986321 223 2 2446666665533 2 2356777777776677 6655
Q ss_pred EEEEEE-eCCeeEeeeceEEEEEEEeeCCeEEEC
Q 029353 162 VTWHLE-WKGKPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 162 v~~~~e-~~Gk~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
++.... +.|..+ .....++++ ||+++|+
T Consensus 89 a~v~~~~~~~~~f--~D~l~L~k~---dg~WkIv 117 (125)
T 3duk_A 89 ARVEAENWTNFKF--SDLFLLLKL---DGKWTIV 117 (125)
T ss_dssp EEEEEECSSSCCE--EEEEEEEEE---TTEEEEE
T ss_pred EEEEEEEcCCCeE--EEEEEEEEe---CCEEEEE
Confidence 665554 445333 234455555 9999995
No 78
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=98.28 E-value=4.9e-06 Score=63.60 Aligned_cols=106 Identities=10% Similarity=0.049 Sum_probs=69.4
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEE--ecCCCeEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDIS--AEDSSAVGV 162 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~vi--a~G~d~Vav 162 (194)
+..+++.+|..+++.+|++.+.++|+||+++..++. +.+.|+++|++++...+.. ++..++.+..+. ..|++.+.+
T Consensus 12 ~I~~l~~ry~~~~D~~d~~~~~~lFt~D~~~~~~~~-~~~~G~~~i~~~~~~~~~~-~~~~~H~~~n~~I~~~gdd~A~~ 89 (150)
T 3ef8_A 12 AIERMMFDYSYHLDMNHPEELAALFVEDCEVSYAPN-FGATGRDAYKKTLEGIGTF-FRGTSHHNSNICIDFVSETEANV 89 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEETT-EEEESHHHHHHHTTTHHHH-EEEEEEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHhcCCCHHHHHhhccCceEEEccCC-CCCCCHHHHHHHHHHhhcc-cCceEEecCCEEEEEcCCCEEEE
Confidence 467889999999999999999999999999875432 3578999999999876542 233333343322 234346555
Q ss_pred EEEEE----e-C-Cee-EeeeceEEEEEEEeeCCeEEEC
Q 029353 163 TWHLE----W-K-GKP-FPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 163 ~~~~e----~-~-Gk~-i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
++.+. . . +.. +...+..+.|+- .||+++|.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~gry~d~~~r--~dg~Wri~ 126 (150)
T 3ef8_A 90 RSVVLAIHRYTKERPDGILYGQYFDTVVK--VDGQWKFK 126 (150)
T ss_dssp EEEEEEEEEESSSSCCEEEEEEEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEEEccCCCCeEEEEEEEEEEEEE--ECCEEEEE
Confidence 55442 1 2 222 222245556666 78999883
No 79
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=98.16 E-value=3.1e-05 Score=57.63 Aligned_cols=103 Identities=13% Similarity=0.160 Sum_probs=64.5
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCC-CccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR-PFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g-~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
+.++++.+|++++..+|.+.|.+.|+||+.+.....+. .....+++.+ +...-.........++..+-..| +...++
T Consensus 10 aI~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~~~~~i~~I~i~g-d~A~a~ 87 (120)
T 3fka_A 10 ALTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETDPFWAISSVSVQG-DIAMLH 87 (120)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCCCCEEEEEEEEET-TEEEEE
T ss_pred HHHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCCceEEEEEEEEEC-CEEEEE
Confidence 46789999999999999999999999999875322111 1223445555 44111110112345566666667 666666
Q ss_pred EEEEeCCeeEeeeceEEEEEEEeeCCeEEEC
Q 029353 164 WHLEWKGKPFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 164 ~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
....+.|..+. ....++++ ||+++|+
T Consensus 88 v~~~~~~~~f~--D~~~L~k~---dg~WkIv 113 (120)
T 3fka_A 88 VENDWAGMRFD--DFLTVLLH---EGSWRIV 113 (120)
T ss_dssp EEEEETTEEEE--EEEEEEEE---TTEEEEE
T ss_pred EEEEcCCCceE--EEEEEEEe---CCEEEEE
Confidence 66666665442 24455555 9999995
No 80
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=98.14 E-value=1.7e-05 Score=62.99 Aligned_cols=57 Identities=16% Similarity=0.120 Sum_probs=47.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcC-CC------CCCccCHHHHHHHHHHhhhh
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDL-IF------PRPFLGRKATLDFFKKFSDS 140 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp-~~------~g~~~Greair~~~~~~~~~ 140 (194)
.+..+++.+|..+++.+|++.+.++|+||+++.-+ .. .+.+.|+++|+++++..+..
T Consensus 26 ~~I~~l~~~y~~~~D~~d~d~~~~lFt~D~~~~~~~~~Gg~~g~~~~~~Gr~aI~~~~~~~~~~ 89 (179)
T 3ejv_A 26 TIILNVLGQYTRAHDRRDPDAMAALFAPEATIEIVDAVGGASRSISRLEGRDAIRVAVRQMMAP 89 (179)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEEEEECGGGCCEEEEEEESHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHhhcCCceEEEEeccCCCcCCCcceecCHHHHHHHHHHhhcc
Confidence 35788899999999999999999999999997643 11 13689999999999977643
No 81
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=98.10 E-value=5.4e-05 Score=59.18 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=79.3
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTW 164 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~ 164 (194)
...+-|+..-++||.+|.+.+.-.|++|.+|.+-.- -+.|+++|.+|+..-+.. .-+++. +.++.+-.++.++|++
T Consensus 18 tA~~KVr~AEDaWNsrdP~rValAYT~Ds~WRNR~e--F~~GR~eI~~FLtrKW~r-E~dYrL-iKELwaf~~nRIAVRF 93 (166)
T 2imj_A 18 SAIEKIRLAEDGWNSRDPERVSLAYTLDTQWRNRAE--FAHNREEAKAFLTRKWAK-ELDYRL-IKELWAFTDNRIAVRY 93 (166)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHTTEEEEEEEEETTE--EECSHHHHHHHHHHHHHH-SEEEEE-EEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHhhhcccChHHHhhccCCCCceecccc--ccCcHHHHHHHHHHHHHh-hccchh-hhhhheecCCeEEEEE
Confidence 356678888899999999999999999999997653 578999999999987754 234443 3456665558999999
Q ss_pred EEEeC---CeeEeeeceEEEEEEEeeCCeE
Q 029353 165 HLEWK---GKPFPFSKGCSFYKLEVVNGKR 191 (194)
Q Consensus 165 ~~e~~---Gk~i~~t~g~~~fr~~~~dGKI 191 (194)
..+|. |+-+.- -|-.-++|++ +|..
T Consensus 94 aYEw~D~~gqWfRs-yGnEnWeFd~-~GlM 121 (166)
T 2imj_A 94 AYEWHDDSGNWFRS-YGNENWEFDE-QGLM 121 (166)
T ss_dssp EEEEECTTSCEEEE-EEEEEEEECT-TSCE
T ss_pred EeEEecCCCCEehh-cCCccceECC-CcCh
Confidence 88873 776766 5889999974 7854
No 82
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=98.05 E-value=1.4e-05 Score=61.21 Aligned_cols=106 Identities=13% Similarity=0.083 Sum_probs=65.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCC--eEEEcCCCCCCccCHHHHHHHHHH-hhhhcCCCcEEEE--EE-EEecCCC
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADD--CVYEDLIFPRPFLGRKATLDFFKK-FSDSISSDLQFVI--DD-ISAEDSS 158 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD--~v~~dp~~~g~~~Greair~~~~~-~~~~~~~d~~~~i--~~-via~G~d 158 (194)
+..+++.+|++|++++|+++|+++|++| +++..|. +...|++++++.|.. .+...++...+.+ .. +...| +
T Consensus 11 ei~~~~~~~~~Al~~~D~~~l~~l~~~~~~~~~i~~~--g~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~~~I~v~g-d 87 (145)
T 3soy_A 11 EITEGINRYLYSIDKADPTLGKQLFYVSPETSFIHPR--GHERGWSQIAENFYGTTMGKTFSKRTLKLDAPPAIHVYG-N 87 (145)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHTTTBCCSSSCEEEETT--EEEESHHHHHHHCCCCCCCCTEEEEEEEESSCCEEEEET-T
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHhCCCCeEEEcCC--CcccCHHHHHHHHHHhhhhccccccceEEeeeeEEEEcC-C
Confidence 3677899999999999999999999776 6676553 367999999887642 1211111122222 23 34455 4
Q ss_pred eEEE--EEEE--Ee--CCeeEee-eceEEEEEEEeeCCeEEEC
Q 029353 159 AVGV--TWHL--EW--KGKPFPF-SKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 159 ~Vav--~~~~--e~--~Gk~i~~-t~g~~~fr~~~~dGKI~i~ 194 (194)
...+ .|++ .. +|+++.. .+...+|+-. .+|.++|+
T Consensus 88 ~A~v~~~~~~~~~~~~~G~~~~~~~r~T~V~~r~-~~ggWkIv 129 (145)
T 3soy_A 88 AAVAEFDWHFTAVRRDNGQTQHTTGRESQVWAKI-PNTGWRIV 129 (145)
T ss_dssp EEEEEEEEEEEEEETTTCCEEEEEEEEEEEEEEE-TTTEEEEE
T ss_pred EEEEEEEEEEEEEEcCCCCeeeeEEEEEEEEEEc-CCCCEEEE
Confidence 4333 4333 22 4766543 1456666552 25999985
No 83
>3ecf_A NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Anabaena variabilis atcc 29413} SCOP: d.17.4.21
Probab=97.93 E-value=7.9e-05 Score=55.72 Aligned_cols=98 Identities=14% Similarity=0.348 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVTWH 165 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~~~ 165 (194)
-.+++.+|+.+|..||...+. |++|+.|..|.-..++.|++.++.|+....... ..+.+...+.++ +++...|.
T Consensus 7 ~v~iieqYl~aF~TgdfS~Vq--Fs~~~~F~sPir~~~l~G~~tV~gFlt~V~trV---a~V~i~~hiVey-p~as~vf~ 80 (130)
T 3ecf_A 7 YHEILKKYFLSFETGDFSQVQ--FSCNLEFLSPISGNTLKGTEEVIPFLKGVTTRV---AEVNIMSTTVEY-PRASGVWQ 80 (130)
T ss_dssp HHHHHHHHHHHHHHCCCTTSC--EEEEEEECCTTCSSCEESHHHHHHHHHHHHTTE---EEEEEEEEEEET-TEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCeeecc--cccCcEEecCccCCCccCchhHHHHHhhhhhhh---heeeeeEEEecc-CccceeEE
Confidence 357899999999999987653 899999999987779999999999999765433 346667778888 88888899
Q ss_pred EE-eCCeeEeeeceEEEEEEEeeCCeEEE
Q 029353 166 LE-WKGKPFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 166 ~e-~~Gk~i~~t~g~~~fr~~~~dGKI~i 193 (194)
++ -+|.-+.+ .++||+|+ +|-..|
T Consensus 81 m~TtkG~~~~~---~~~f~~de-egi~~i 105 (130)
T 3ecf_A 81 MRTTKGTLYTL---HNFFRLDE-EGIVYV 105 (130)
T ss_dssp EEETTSCEEEE---EEEEEEET-TEEEEE
T ss_pred EEeccceEEEE---eehheecc-cCcEEE
Confidence 85 46877755 69999974 675544
No 84
>3ksp_A Calcium/calmodulin-dependent kinase II associatio; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG; HET: MSE NHE; 2.59A {Exiguobacterium sibiricum 255-15}
Probab=97.92 E-value=0.00013 Score=55.48 Aligned_cols=105 Identities=11% Similarity=0.047 Sum_probs=70.2
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
...+++.+++++|.-++|.++|.+|++||.++..+. |...+++++.+-+..--...+..+...-..+...| +.+.+.
T Consensus 9 ~~~~~le~~~~~A~~~~D~~~L~~LL~ddf~~v~~s--G~~~~K~~~L~~~~~~~~~~~~~~~~~~~~vr~~g-d~AvVt 85 (129)
T 3ksp_A 9 LQLQTLLSERHAYLMEGNREAMHQLLSSDFSFIDGQ--GRQFDAETYLDHYVDPDQIQWSNQISESMVVEVFE-TTALVQ 85 (129)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEEEECTT--CCEECHHHHHHHHSCTTTEEEEEEEEEEEEEEECS-SEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhcCCCEEEECCC--CCCcCHHHHHHHhccCCCccceeecccceeEEEEC-CEEEEE
Confidence 346788999999999999999999999999998764 46789988776332100000111112222333445 555454
Q ss_pred EEE----EeCCeeEe--eeceEEEEEEEeeCCeEEEC
Q 029353 164 WHL----EWKGKPFP--FSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 164 ~~~----e~~Gk~i~--~t~g~~~fr~~~~dGKI~i~ 194 (194)
+.. .++|+++. + +...+|+. .+|.++++
T Consensus 86 ~~~~~~~~~~g~~~~~~~-~~t~VW~~--~~g~Wrlv 119 (129)
T 3ksp_A 86 EIVEDHFSYGRSMYIGRF-RSVSLYHW--ANEGWKWH 119 (129)
T ss_dssp EEEEEEEEETTEEEEEEE-EEEEEEEE--ETTEEEEE
T ss_pred EEEEEEEecCCeEEeEEE-EEEEEEEE--eCCeeEEE
Confidence 433 56788844 5 58899999 89999874
No 85
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=97.77 E-value=0.00024 Score=54.18 Aligned_cols=105 Identities=7% Similarity=0.029 Sum_probs=67.3
Q ss_pred cHHHHHHHHHHHHhCCCHHHH-HhhhcCCeEEEcCC---CCCCccCHHHHHHHHHHhhhhcCCCcEEEEEE--EEecCCC
Q 029353 85 GGAVVVRRFYAGINGRDLASV-EELIADDCVYEDLI---FPRPFLGRKATLDFFKKFSDSISSDLQFVIDD--ISAEDSS 158 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal-~~L~ApD~v~~dp~---~~g~~~Greair~~~~~~~~~~~~d~~~~i~~--via~G~d 158 (194)
++++++.+|..+++.+|++.+ ..||+||+++.-.. ..+...|++++.+++...+... +..++.+.. +..+| |
T Consensus 12 ~I~~L~~rY~~~~D~~d~~~l~~~~ft~Da~~d~~~~~g~~~~~~g~~~~~~~~~~~~~~~-~~t~H~~~n~~I~vdg-D 89 (159)
T 4gb5_A 12 EIIELFGRYADIADLKEFTDLPRRVHTDPLTIDFESVTGMPPMTVPLSDYGAALRASFGAF-SATHHAITGHVVTIDS-D 89 (159)
T ss_dssp HHHHHHHHHHHHHHTTCCSSHHHHHEEEEEEEECHHHHCCCCEEECHHHHHHHHHHHHTTC-SEEEEEEEEEEEEEET-T
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhhCcCCEEEEecCCCCCcccccHHHHHHHHHHHhccCC-ceEEEecCCceEEEcC-C
Confidence 478899999999999999775 67999999987322 2345789999999998876543 333333322 23355 6
Q ss_pred eEEEEEEEE---e-------C-CeeEee-eceEEEEEEEeeCCeEEE
Q 029353 159 AVGVTWHLE---W-------K-GKPFPF-SKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 159 ~Vav~~~~e---~-------~-Gk~i~~-t~g~~~fr~~~~dGKI~i 193 (194)
....++.+. + . +..+.. .+..+.|+- .+|.++|
T Consensus 90 ~A~~~~~~~a~~~~~~~~~~~~~~~~~~~G~Y~d~~~r--~~g~Wri 134 (159)
T 4gb5_A 90 RATIHAHVRAEHWLPAEVAGDGPDRWLVVGFYDNEAVR--TADGWRL 134 (159)
T ss_dssp EEEEEEEEEEEEECCHHHHTTSCCEEEEEEEEEEEEEE--ETTEEEE
T ss_pred EEEEEEEEEEEEeeccccCCCCceEEEEEEEEEEEEEE--ECCEEEE
Confidence 555544431 1 1 222222 134566666 7898888
No 86
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=97.22 E-value=0.013 Score=45.71 Aligned_cols=55 Identities=9% Similarity=-0.077 Sum_probs=42.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHH-hhhcCCeEEEcCCCCC-----------------CccCHHHHHHHHHHhhh
Q 029353 85 GGAVVVRRFYAGINGRDLASVE-ELIADDCVYEDLIFPR-----------------PFLGRKATLDFFKKFSD 139 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~-~L~ApD~v~~dp~~~g-----------------~~~Greair~~~~~~~~ 139 (194)
+..+++-+|-.+++.+|++.+. +||+||++|.-|.... ...|++.+++.+..+..
T Consensus 15 ~I~~~l~rya~~lD~~d~d~w~~~lfteD~~y~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~~ 87 (174)
T 2gbw_B 15 DIEAHYRAEVRMFQTGQYREWLQGMVAEDIHYWMPIYEQRLTRDRRPDPTPDDAAIYNDDFGELKQRVERLYS 87 (174)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTEEEEEEEEEECCCCCCTTCCCCCCCTTSCEEEEECHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHhhccCCEEEEeeccccccccccccCCCcccceeEcCCHHHHHHHHHHHhc
Confidence 3566777777899999999999 9999999998554321 13578899888876543
No 87
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=97.16 E-value=0.0077 Score=46.74 Aligned_cols=54 Identities=7% Similarity=-0.161 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCC---------------CccCHHHHHHHHHHhh
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR---------------PFLGRKATLDFFKKFS 138 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g---------------~~~Greair~~~~~~~ 138 (194)
+..+++-+|..+++.+|++.+.+||+||++|.-|.... ...|++.+++.+..+.
T Consensus 14 ~I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~d~~~~~~~~~~~~~~l~~rv~~l~ 82 (172)
T 2b1x_B 14 EITEWLYMEAELLDAGKYREWLALVTEDLSYVVPIRVTREREAVTDVVEGMTHMDDDADSMEMRVLRLE 82 (172)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEEEECCCCTTSSCCEEEEEEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccCHHHHHHhccCCEEEEEEeecccccccccCCCcccEEEeCCHHHHHHHHHHHh
Confidence 45667777778999999999999999999987553211 1248999998776554
No 88
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=96.88 E-value=0.019 Score=44.90 Aligned_cols=107 Identities=14% Similarity=0.179 Sum_probs=62.1
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCC-------C--------ccCHHHHHHHHHHhhh----hcCCC-
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR-------P--------FLGRKATLDFFKKFSD----SISSD- 144 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g-------~--------~~Greair~~~~~~~~----~~~~d- 144 (194)
+..+++-+|-.+++.+|++.+.++|+|||+|.-|.... + ..+++.++.-...+.. ...|.
T Consensus 9 ~i~~~l~~~a~~lD~~~~~~w~~lf~~D~~Y~~p~~~~~~~~~~d~~~~~~~i~~~~~~~L~~RV~rl~~~~~~~~~p~~ 88 (164)
T 3e99_A 9 DIQAFLYRESRLLDDKAWDAWLDCYRADAVFWMPSWDDADALVTDPQREISLIYYPNRQGLEDRVFRIKTERSSATVPDT 88 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECCCC-----------CEEEEESSHHHHHHHHHHHHHHHHHCCSSCC
T ss_pred HHHHHHHHHHHHhccccHHHHHHhcCCCEEEEEeccccccccccCCCCcceEEEcCCHHHHHHHHHHHhCccccccCCCc
Confidence 45667777778999999999999999999998666421 1 3677777766554432 12232
Q ss_pred -cEEEEEEEEe--cCCCeEEEEEEE---E--eCCeeEeeeceEEEEEEEeeCCeEEE
Q 029353 145 -LQFVIDDISA--EDSSAVGVTWHL---E--WKGKPFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 145 -~~~~i~~via--~G~d~Vav~~~~---e--~~Gk~i~~t~g~~~fr~~~~dGKI~i 193 (194)
.+..+..+.. .+++.+.++..+ . .++... + -|.-.+++...+|.++|
T Consensus 89 rtrH~vsnv~v~~~~~~~~~v~s~~~v~~~r~~~~~~-~-~G~~~d~L~r~~~~wri 143 (164)
T 3e99_A 89 RTSHNIANVERESADGDVHTVRFNWHTLSYRYKTVSS-Y-FGMSRYAIDFSGDAPKI 143 (164)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEEEEEEEETTEEEE-E-EEEEEEEEECSSSSCEE
T ss_pred eEEEEEeCEEEEEeCCCEEEEEEEEEEEEECCCCeEE-E-EEEEEEEEEEECCEEEE
Confidence 2333333222 222566554333 1 123332 3 25555555335776666
No 89
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=96.86 E-value=0.0021 Score=51.07 Aligned_cols=53 Identities=11% Similarity=0.134 Sum_probs=42.0
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCC-CC--CccCHHHHHHHHHH
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF-PR--PFLGRKATLDFFKK 136 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~-~g--~~~Greair~~~~~ 136 (194)
...++++.+|+.+++.+|++.|.++|+||++..-..+ +. ...+++++.+++..
T Consensus 17 ~~I~~l~~rY~Ra~DtkDwd~lr~~fapd~~~Dy~~~~~~~~~~~~~d~~v~~~~~ 72 (172)
T 1idp_A 17 LGLMTCVYEWADSYDSKDWDRLRKVIAPTLRIDYRSFLDKLWEAMPAEEFVGMVSS 72 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEEEEECHHHHSCEEEEEEHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHhCCCEEEEcccccCcccccCCHHHHHHHHhh
Confidence 3477889999999999999999999999998862111 11 34679999999884
No 90
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=96.67 E-value=0.044 Score=43.43 Aligned_cols=53 Identities=15% Similarity=-0.038 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCC------------------CccCHHHHHHHHHHhh
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR------------------PFLGRKATLDFFKKFS 138 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g------------------~~~Greair~~~~~~~ 138 (194)
..+++-+|-.+++.+|++.+.+||+||++|.-|.... ...|++.+++.+..+.
T Consensus 26 I~~~l~r~A~lLD~~d~d~w~~lfteD~~y~~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Rv~rl~ 96 (187)
T 1uli_B 26 IEQFYYWEAKLLNDRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQEYSGAREYAHFDDNAQMMRGRLRKIT 96 (187)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCcCHHHHHHHcccCEEEEeeccccccccccccccCCccceeeecCCHHHHHHHHHHHh
Confidence 4556666667999999999999999999998654321 1257888888777654
No 91
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=96.60 E-value=0.019 Score=44.32 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=41.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCC-----C-----ccCHHHHHHHHHHhh
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPR-----P-----FLGRKATLDFFKKFS 138 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g-----~-----~~Greair~~~~~~~ 138 (194)
+..+++-+|-.+++.+|++++.+||+||++|.-|...+ + ..|++.+++.+..+.
T Consensus 15 ~I~~ll~rya~~lD~~d~d~w~~lft~D~~y~~p~~~~~~~~~~~~~~~~~~~~~l~~rv~~l~ 78 (163)
T 3eby_A 15 AIDDFNAAYGLCLDDDRLEQWPTLFVDDCLYQVIARENVDNGLPAAVMYCDSKGMLADRVVALR 78 (163)
T ss_dssp HHHHHHHHHHHHHHTTCGGGTGGGEEEEEEEEEEEGGGGGSSSCCEEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccHHHHHHhhcCCEEEEeeccccCCCCCCcEEEEcCCHHHHHHHHHHhh
Confidence 35566777778999999999999999999997553210 1 258999988777654
No 92
>3nv0_B NTF2-related export protein; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=96.36 E-value=0.012 Score=45.88 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEec--C-------
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAE--D------- 156 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~--G------- 156 (194)
..+.|+.||..++. |.+.|..+|.++..+...+ ..+.|+++|.+.|..+ |..+.++..+-+. .
T Consensus 37 g~~FV~qYY~~~d~-~R~~L~~fY~d~S~ls~~g--~~~~G~~~I~~~l~~L-----p~~~h~I~s~D~qp~~~~~~~q~ 108 (154)
T 3nv0_B 37 SKKFMDVYYDVMDR-KREKIGFLYTQVSNAVWNG--NPINGYDSICEFMKAL-----PSTQHDIQSLDAQRLPEGVTGDM 108 (154)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEETT--EEEESHHHHHHHHHHS-----CCEEEEEEEEEEEECCTTCCGGG
T ss_pred HHHHHHHHHHHHhC-CHHHHHHHhcCCcEEEECC--eecccHHHHHHHHHhC-----CCeEEEEEEEEEEEcCccccCCC
Confidence 56789999999997 8999999999999887654 3689999999999853 3345555333211 1
Q ss_pred CCeEEEEEEE--EeCCee-EeeeceEEEEEEEeeCCeEEE
Q 029353 157 SSAVGVTWHL--EWKGKP-FPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 157 ~d~Vav~~~~--e~~Gk~-i~~t~g~~~fr~~~~dGKI~i 193 (194)
+..+.+...+ ..+|.+ .. ....|-+.+.+|++.|
T Consensus 109 ~~~ilI~V~G~l~~~~~~~r~---F~QtFvL~p~~~~y~V 145 (154)
T 3nv0_B 109 SGGMLLNVAGAVTVDGDSKRA---FTQTLLLGVEDGKYKV 145 (154)
T ss_dssp TTCEEEEEEEEEEETTSCCEE---EEEEEEEEEETTEEEE
T ss_pred CCeEEEEEEEEEEECCCCcee---EEEEEEEEEeCCEEEE
Confidence 1234444444 445553 33 3455555445677766
No 93
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=96.33 E-value=0.13 Score=40.92 Aligned_cols=107 Identities=12% Similarity=0.005 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCC------------------ccCHHHHHHHHHHhhhh-c---CC
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRP------------------FLGRKATLDFFKKFSDS-I---SS 143 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~------------------~~Greair~~~~~~~~~-~---~~ 143 (194)
..+++-++-.+++.+|++.+.++|+|||+|.-|..... ..++..++.-..++... . .|
T Consensus 25 i~~~l~~~a~llD~~~~~~w~~lft~D~~Y~~p~~~~~~~~d~~~~~~~~~~~~~~~d~r~~L~~RV~rl~t~~~~a~~P 104 (186)
T 3gzx_B 25 VEQFYYREAQLLDHHAFQAWFALLAEDIHYWMPIRTVRTAREQGLEYVPAGANAHFDDTHATMYGRIRQKTSDLNWAEDP 104 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEEEEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHTTTCCGGGSS
T ss_pred HHHHHHHHHHHhcccCHHHHHHhCCCCEEEEEecCCCccccccccccCccccceeeeCCHHHHHHHHHHHhcccccccCC
Confidence 34455555569999999999999999999996654321 24788888877765321 1 12
Q ss_pred C--cEEEEEEE--Eec-CCCeEEEEEEE---Ee--CCeeEeeeceEEEEEEEe-eCC-eEEE
Q 029353 144 D--LQFVIDDI--SAE-DSSAVGVTWHL---EW--KGKPFPFSKGCSFYKLEV-VNG-KRQI 193 (194)
Q Consensus 144 d--~~~~i~~v--ia~-G~d~Vav~~~~---e~--~Gk~i~~t~g~~~fr~~~-~dG-KI~i 193 (194)
. .+..+..+ ... +++.+.++..+ .. .|..--+ -|.-.+++.. .+| .++|
T Consensus 105 ~~RtrH~vsNv~v~~~~~~~~~~vrs~~~v~~~r~~~~~~~~-~G~y~D~L~r~~~g~~wrI 165 (186)
T 3gzx_B 105 PSRTRHLVSNVIVREMDTPGTLEVASAFLLYRSRLERQVDVF-AGERRDVLRIADNPLGFQI 165 (186)
T ss_dssp CCEEEEEEEEEEEEECSSTTEEEEEEEEEEEEEETTTEEEEE-EEEEEEEEEECSSTTSEEE
T ss_pred CceEEEEEcCEEEEEecCCCEEEEEEEEEEEEEcCCCcEEEE-EEEEEEEEEEcCCCceEEE
Confidence 2 23333332 222 23666664333 11 2443334 3666667642 366 7776
No 94
>1gy6_A Nuclear transport factor 2; 1.6A {Rattus norvegicus} SCOP: d.17.4.2 PDB: 1a2k_A 1oun_A 1ar0_A 1u5o_A 1ask_A 1gy5_A 1jb5_A 1jb4_A 1jb2_A 1qma_A
Probab=96.24 E-value=0.053 Score=40.53 Aligned_cols=99 Identities=13% Similarity=0.158 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe--cCCCeEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA--EDSSAVGVT 163 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via--~G~d~Vav~ 163 (194)
..+.|+.||..++. |.+.|..+|+++..+..++ ....|+++|.+.+..+ -+.+.++++..+-+ ..+..+.+.
T Consensus 11 ~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~ls~~g--~~~~G~~~I~~~l~~L---p~~~~~h~i~t~d~qp~~~~~ili~ 84 (127)
T 1gy6_A 11 GSSFIQHYYQLFDN-DRTQLGAIYIDASCLTWEG--QQFQGKAAIVEKLSSL---PFQKIQHSITAQDHQPTPDSCIISM 84 (127)
T ss_dssp HHHHHHHHHHHHHH-HGGGGGGGEEEEEEEEETT--EEEESHHHHHHHHHHC---SCSCEEEEEEEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHHHhC-CHHHHHHhhCCCcEEEECC--ccccCHHHHHHHHHhC---CCcceEEEEEEEEEEEeCCCcEEEE
Confidence 45689999999998 8999999999999888664 3789999999999853 12345666544322 111334454
Q ss_pred EEEE--eCC-eeEeeeceEEEEEEEeeCCeEEE
Q 029353 164 WHLE--WKG-KPFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 164 ~~~e--~~G-k~i~~t~g~~~fr~~~~dGKI~i 193 (194)
.++. .++ ..-.+ ...|-+.+.+|++.|
T Consensus 85 V~G~~~~~~~~~~~F---~qtF~L~p~~~~~~I 114 (127)
T 1gy6_A 85 VVGQLKADEDPIMGF---HQMFLLKNINDAWVC 114 (127)
T ss_dssp EEEEEEETTSCCEEE---EEEEEEEEETTEEEE
T ss_pred EEEEEEECCCCcceE---eEEEEEEEeCCEEEE
Confidence 4443 333 23333 344444434566655
No 95
>1zo2_A NTF2, nuclear transport factor 2; structural genomics, structural genomics consortium, SGC, transport protein; 1.60A {Cryptosporidium parvum} SCOP: d.17.4.2
Probab=96.22 E-value=0.073 Score=39.90 Aligned_cols=99 Identities=16% Similarity=0.237 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe--cCCCeEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA--EDSSAVGVT 163 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via--~G~d~Vav~ 163 (194)
..+.|+.||..++. |.+.|..+|.++..+...+ ....|+++|.+.+..+ -+.+.++++..+-+ ..+..|.+.
T Consensus 15 ~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~ls~~g--~~~~G~~~I~~~l~~L---p~~~~~h~i~t~D~qp~~~~gilI~ 88 (129)
T 1zo2_A 15 GKQFVQHYYQTFQT-NRPALGGLYGPQSMLTWED--TQFQGQANIVNKFNSL---NFQRVQFEITRVDCQPSPNNGSIVF 88 (129)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEETT--EEEESHHHHHHHHHHH---CCSCEEEEEEEEEEEECTBSSEEEE
T ss_pred HHHHHHHHHHHHhC-CHHHHHHhhCCCcEEEECC--ceeccHHHHHHHHHhC---CCcceEEEEEEEEEEEeCCCcEEEE
Confidence 46689999999998 7999999999999988664 3789999999999864 13345556544322 111244454
Q ss_pred EEEE--eCCe-eEeeeceEEEEEEEeeC-CeEEE
Q 029353 164 WHLE--WKGK-PFPFSKGCSFYKLEVVN-GKRQI 193 (194)
Q Consensus 164 ~~~e--~~Gk-~i~~t~g~~~fr~~~~d-GKI~i 193 (194)
.++. .++. +..+ ...|-+.+.+ |++.|
T Consensus 89 V~G~~~~~~~~~~~F---~qtF~L~p~~~~~y~I 119 (129)
T 1zo2_A 89 VTGDVRIDDGQPLKF---SQVFNLMPSGNGGFMI 119 (129)
T ss_dssp EEEEEEETTCCCEEE---EEEEEEEECSSSCEEE
T ss_pred EEEEEEECCCCcceE---EEEEEEEEcCCCcEEE
Confidence 4443 3433 3333 3555554333 56655
No 96
>1wql_B Ethylbenzene dioxygenase small subunit; biphenyl dioxygenase, cumene dioxygenase; 2.20A {Pseudomonas fluorescens} SCOP: d.17.4.4
Probab=96.15 E-value=0.14 Score=40.37 Aligned_cols=54 Identities=11% Similarity=-0.082 Sum_probs=39.2
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCC-----C------CC-------ccCHHHHHHHHHHhh
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF-----P------RP-------FLGRKATLDFFKKFS 138 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~-----~------g~-------~~Greair~~~~~~~ 138 (194)
+..+++-+|-.+++.+|++.+.+||+||++|.-|.. + ++ ..|++.++.....+.
T Consensus 24 eI~~~l~r~A~lLD~~d~~~w~~lfteD~~y~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~Rv~rl~ 95 (186)
T 1wql_B 24 AVEQFYYREAQLLDYQNYEAWLALLTQDIQYWMPIRTTHTSRNKAMEYVPPGGNAHFDETYESMRARIRARV 95 (186)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCTTCCEEEECBCCCCGGGGGGSBCCTTSCEEEEECHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCcCHHHHHHHhhCCEEEEeeccccccccccccccCCccceEEEeCCHHHHHHHHHHHh
Confidence 345566666679999999999999999999976543 1 11 257777777666544
No 97
>1gy7_A Nuclear transport factor 2; protein transport; 1.6A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1gyb_A
Probab=96.08 E-value=0.059 Score=40.18 Aligned_cols=99 Identities=13% Similarity=0.155 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe--c-CCCeEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA--E-DSSAVGV 162 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via--~-G~d~Vav 162 (194)
..+.|+.||..++. |.+.|..+|+++..+..++ ....|+++|.+.+..+ -+.+.++++..+-+ . +++.+.+
T Consensus 9 ~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~~s~~g--~~~~G~~~I~~~l~~L---p~~~~~h~i~t~D~qp~~~~~gili 82 (125)
T 1gy7_A 9 AQNFTQFYYNQFDT-DRSQLGNLYRNESMLTFET--SQLQGAKDIVEKLVSL---PFQKVQHRITTLDAQPASPYGDVLV 82 (125)
T ss_dssp HHHHHHHHHHHHHH-HGGGGGGGEEEEEEEEETT--EEEESHHHHHHHHHHS---CCSCEEEEEEEEEEEESSTTSCEEE
T ss_pred HHHHHHHHHHHHcC-CHHHHHHhhCCCcEEEECC--cEecCHHHHHHHHHhC---CCcceEEEEEEEEEEEecCCCeEEE
Confidence 45689999999998 7999999999999887654 3689999999998853 12356666654322 1 1134555
Q ss_pred EEEEE--eCCe--eEeeeceEEEEEEEeeCCeEEE
Q 029353 163 TWHLE--WKGK--PFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 163 ~~~~e--~~Gk--~i~~t~g~~~fr~~~~dGKI~i 193 (194)
..++. .++. +..+ ...|-+.+.++++.|
T Consensus 83 ~V~G~~~~~~~~~~~~F---~qtF~L~p~~~~~~I 114 (125)
T 1gy7_A 83 MITGDLLIDEEQNPQRF---SQVFHLIPDGNSYYV 114 (125)
T ss_dssp EEEEEEEETTCSSCEEE---EEEEEEEEETTEEEE
T ss_pred EEEEEEEECCCCCCccE---eEEEEEEEeCCEEEE
Confidence 44443 3443 3434 344555444556555
No 98
>2bmo_B Oxygenase-beta NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: d.17.4.4 PDB: 2bmq_B 2bmr_B* 1o7n_B 1ndo_B 1o7g_B* 1o7h_B 1o7m_B 1eg9_B 1o7p_B* 1o7w_B 1uuv_B 1uuw_B 2hmj_B 2hmk_B* 2hml_B* 2hmm_B* 2hmn_B* 2hmo_B*
Probab=95.70 E-value=0.31 Score=38.94 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhCCCHHHHHh-hhcCCeEEEcCC
Q 029353 86 GAVVVRRFYAGINGRDLASVEE-LIADDCVYEDLI 119 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~-L~ApD~v~~dp~ 119 (194)
..+++-+|-.+++.++++.+.+ ||+||++|.-|.
T Consensus 34 I~~fl~reA~lLD~~~~d~W~~~lfteD~~y~~p~ 68 (194)
T 2bmo_B 34 VTTLLTREAHLLDIQAYKAWLEHFVAPEIKYQVIS 68 (194)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcccCHHHHHHhhcCCCEEEEEec
Confidence 4445555557999999999999 999999997554
No 99
>3ujm_A Rasputin; NTF2-like fold, RAS signaling, signaling protein; HET: EPE; 2.74A {Drosophila melanogaster}
Probab=95.57 E-value=0.17 Score=37.40 Aligned_cols=100 Identities=17% Similarity=0.240 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe--cCCCeEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA--EDSSAVGVT 163 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via--~G~d~Vav~ 163 (194)
..+.|+.||..++ .+.+.|..+|.++..+-... +....|+++|.+.+..+ -+++.++++..+-+ ..++.|.+.
T Consensus 7 g~~Fv~~YY~~ld-~~r~~L~~~Y~~~s~~~~~~-~~~~~G~~~I~~~l~~L---pf~~~~~~I~t~D~Qp~~~~gili~ 81 (120)
T 3ujm_A 7 GREFVRQYYTLLN-KAPNHLHRFYNHNSSYIHGE-SKLVVGQREIHNRIQQL---NFNDCHAKISQVDAQATLGNGVVVQ 81 (120)
T ss_dssp HHHHHHHHHHHHH-HCGGGGGGGEEEEEEEEETT-CCCEESHHHHHHHHHHH---CCCSCEEEEEEEEEEEEGGGEEEEE
T ss_pred HHHHHHHHHHHHh-cCHHHHhhhecccceEEEcC-CcEecCHHHHHHHHHcC---CCcceEEEEecccceEcCCCCEEEE
Confidence 5678999999999 48999999999997543221 24689999999999864 24566666543321 111345554
Q ss_pred EEE--EeCCee-EeeeceEEEEEEEeeC-CeEEE
Q 029353 164 WHL--EWKGKP-FPFSKGCSFYKLEVVN-GKRQI 193 (194)
Q Consensus 164 ~~~--e~~Gk~-i~~t~g~~~fr~~~~d-GKI~i 193 (194)
.++ ..++.+ ..+ +..|-+.+.+ |++.|
T Consensus 82 V~G~l~~~~~~~r~F---~QtF~L~p~~~~~y~V 112 (120)
T 3ujm_A 82 VTGELSNDGQPMRRF---TQTFVLAAQSPKKYYV 112 (120)
T ss_dssp EEEEEESTTCCCEEE---EEEEEEEECSTTCEEE
T ss_pred EEEEEEeCCCCCceE---EEEEEEEEcCCCCEEE
Confidence 444 445543 233 4666664433 56665
No 100
>2qiy_A UBP3-associated protein BRE5; deubiquitylation, ubiquitin-specific processing proteases(UB NTF2, protein-protein recognition; 1.69A {Saccharomyces cerevisiae} SCOP: d.17.4.2 PDB: 1zx2_A
Probab=95.44 E-value=0.14 Score=39.40 Aligned_cols=64 Identities=14% Similarity=0.272 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCC-------------CCCccCHHHHHHHHHHhhhhcCCCcEEEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF-------------PRPFLGRKATLDFFKKFSDSISSDLQFVIDD 151 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~-------------~g~~~Greair~~~~~~~~~~~~d~~~~i~~ 151 (194)
..+.|+.||..++. |.+.|..+|+++..+..... +....|+++|.+.+..+.+. +.+.++++..
T Consensus 15 ~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~~s~~~~~~~s~~~~~d~~~~~~~~G~~~I~~~l~~L~~p-f~~~~h~I~s 91 (154)
T 2qiy_A 15 CFAFLQNYYERMRT-DPSKLAYFYASTAELTHTNYQSKSTNEKDDVLPTVKVTGRENINKFFSRNDAK-VRSLKLKLDT 91 (154)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEEECTTCC----CCSSCCEEEEESHHHHHHHHHHTHHH-HTTEEEEEEE
T ss_pred HHHHHHHHHHHHhC-CHHHHHHhhCCCcEEEEccccccccccccccccceEeeCHHHHHHHHHhccCC-CCceEEEEEE
Confidence 46689999999998 89999999999987664421 34678999999999875211 2245555543
No 101
>1jkg_A P15; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_A
Probab=95.43 E-value=0.19 Score=37.99 Aligned_cols=49 Identities=12% Similarity=0.181 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHh
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKF 137 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~ 137 (194)
..+.|+.||..++. |.+.|..+|+++..+...+ ....|+++|.+.+..+
T Consensus 17 ~~~Fv~~YY~~~d~-~r~~L~~~Y~~~S~ls~~g--~~~~G~~~I~~~l~~L 65 (140)
T 1jkg_A 17 AEEFVNVYYTTMDK-RRRLLSRLYMGTATLVWNG--NAVSGQESLSEFFEML 65 (140)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEEEEEEETT--EEEESHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhC-CHHHHHHhcCCCcEEEECC--eeecCHHHHHHHHHhC
Confidence 56789999999998 8999999999999887654 4789999999998853
No 102
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=94.80 E-value=0.13 Score=45.60 Aligned_cols=110 Identities=13% Similarity=0.101 Sum_probs=76.3
Q ss_pred CCCcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcC-CCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEE--EEecCCC
Q 029353 82 DDGGGAVVVRRFYAGINGRDLASVEELIADDCVYEDL-IFPRPFLGRKATLDFFKKFSDSISSDLQFVIDD--ISAEDSS 158 (194)
Q Consensus 82 ~~~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp-~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~--via~G~d 158 (194)
...+..++.+++.++++++|++....+..++.+..+| ..+..+.|.+-.+-||+..+.......+.++.+ +-.-|++
T Consensus 316 ~~~e~~~~~~~~l~~i~~gD~~~y~~l~~~~~t~fep~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~~~~p~v~~~~~~ 395 (444)
T 3soa_A 316 RKQEIIKVTEQLIEAISNGDFESYTKMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDE 395 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSHHHHHHEEEEEEEECGGGTTCEEEHHHHTHHHHHHTSTTCSSCCEEEEEEEEEEEETTT
T ss_pred chHHHHHHHHHHHhhhhcCCchhhcccCCCCCCccCcccccccccCcchhhhhhhcccccCCCcceEeecCCceEEecCc
Confidence 3455677889999999999999999999999998877 566678999888888887554333445555432 2223535
Q ss_pred eEEEEEE-E--Ee--CCe--eEeeeceEEEEEEEeeCCeEEEC
Q 029353 159 AVGVTWH-L--EW--KGK--PFPFSKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 159 ~Vav~~~-~--e~--~Gk--~i~~t~g~~~fr~~~~dGKI~i~ 194 (194)
.+++.+. . .. .|+ .... +..-+|+- ++|++++|
T Consensus 396 ~a~~~y~~~~~~~~~~~~~~~~~~-~~t~~~~~--~~~~w~~~ 435 (444)
T 3soa_A 396 SACIAYIRITQYLDAGGIPRTAQS-EETRVWHR--RDGKWQIV 435 (444)
T ss_dssp EEEEEEEEEEEEECTTSCEEEEEE-EEEEEEEE--ETTEEEEE
T ss_pred ceeeeeeeeeeeeccCCCccccch-hhheeeee--cCCceEEE
Confidence 3333332 2 22 353 4555 67889998 89999875
No 103
>1jkg_B TAP; NTF2-like domain, transport protein; 1.90A {Homo sapiens} SCOP: d.17.4.2 PDB: 1jn5_B 1go5_A
Probab=94.47 E-value=0.1 Score=43.43 Aligned_cols=52 Identities=15% Similarity=0.159 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCC--C-----------------------------CCccCHHHHHHHH
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIF--P-----------------------------RPFLGRKATLDFF 134 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~--~-----------------------------g~~~Greair~~~ 134 (194)
..+.|+.||..|+..|-+.|..+|+++..+..-.. + ..+.|+++|.++|
T Consensus 18 ~~~Fv~~Yy~~fD~~~R~~L~~lY~~~s~fS~~~~~~~~~~~~~~~~~Y~~~sRNl~~~~~~~~r~~~~~~G~~~I~~~l 97 (250)
T 1jkg_B 18 VLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFL 97 (250)
T ss_dssp HHHHHHHHHHHHTSSCGGGGGGTEEEEEEEEEECCCC------CCCHHHHTTBCCTTTCCCHHHHHHHSEESHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCcHHHHHHhhCcCcEEEEEeCCCCCCccccchhhhhhhccchhcccchhhhhhhhccCHHHHHHHH
Confidence 46789999999999999999999999998763211 1 1468999999999
Q ss_pred HHh
Q 029353 135 KKF 137 (194)
Q Consensus 135 ~~~ 137 (194)
..+
T Consensus 98 ~~L 100 (250)
T 1jkg_B 98 NEL 100 (250)
T ss_dssp TTS
T ss_pred HhC
Confidence 853
No 104
>3q90_A RAS GTPase-activating protein-binding protein 1; structural genomics, structural genomics consortium, SGC, NT (A+B proteins); 1.70A {Homo sapiens} SCOP: d.17.4.0
Probab=93.14 E-value=0.59 Score=35.30 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCC---CC---CCccCHHHHHHHHHHhhhhcCCCcEEEEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLI---FP---RPFLGRKATLDFFKKFSDSISSDLQFVIDD 151 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~---~~---g~~~Greair~~~~~~~~~~~~d~~~~i~~ 151 (194)
..+.|+.||..+++ +.+.|..+|.++..+.... .+ ....|+++|.+.+..+ -+.+.++++..
T Consensus 13 g~~Fv~~YY~~ld~-~r~~L~~~Y~~~S~l~~~~~~~ng~~~~~~~G~~~I~~~l~~L---p~~~~~~~I~t 80 (140)
T 3q90_A 13 GREFVRQYYTLLNQ-APDMLHRFYGKNSSYVHGGLDSNGKPADAVYGQKEIHRKVMSQ---NFTNCHTKIRH 80 (140)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEEEEEC----------CCCEEHHHHHHHHHHHT---CCCSCEEEEEE
T ss_pred HHHHHHHHHHHHhc-CHHHHHhhcccCceEEEEccCCCCceeecccCHHHHHHHHHhC---CCccceEEEEe
Confidence 45679999999994 8889999999999665321 11 2578999999998854 23445666543
No 105
>1of5_A MRNA export factor MEX67; nuclear protein, repeat, leucine- rich repeat, nuclear transport; 2.8A {Saccharomyces cerevisiae} SCOP: d.17.4.2
Probab=92.26 E-value=0.54 Score=38.59 Aligned_cols=30 Identities=7% Similarity=0.114 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYE 116 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~ 116 (194)
..+.|+.||..|+. |-..|+.+|+++..+.
T Consensus 14 ~~~Fv~~Yy~~fDs-dR~~L~~lY~~~S~fS 43 (221)
T 1of5_A 14 STDFATNFLNLWDN-NREQLLNLYSPQSQFS 43 (221)
T ss_dssp HHHHHHHHHHHHHH-CGGGGGGGEEEEEEEE
T ss_pred HHHHHHHHHHHHcc-CHHHHHHhhCcCcEEE
Confidence 56789999999998 8999999999999875
No 106
>1q40_B MEX67, mRNA export factor MEX67; NTF2-fold, nuclear export, translation; 1.95A {Candida albicans} SCOP: d.17.4.2
Probab=85.69 E-value=1.5 Score=35.90 Aligned_cols=30 Identities=3% Similarity=0.150 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYE 116 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~ 116 (194)
..+.|+.||..|+. |-+.|+.+|+++..+.
T Consensus 17 ~~~Fl~~Yy~~fDs-dR~~L~~lY~~~S~fS 46 (219)
T 1q40_B 17 ATNFIANYLKLWDA-NRSELMILYQNESQFS 46 (219)
T ss_dssp HHHHHHHHHHHHHS-CGGGGGGGCCTTCEEE
T ss_pred HHHHHHHHHHHHcc-CHHHHHHhhccccEEE
Confidence 56789999999997 8999999999999876
No 107
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=84.72 E-value=9.2 Score=27.59 Aligned_cols=92 Identities=8% Similarity=-0.031 Sum_probs=59.0
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEE----EecCCCeE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDI----SAEDSSAV 160 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~v----ia~G~d~V 160 (194)
..++..+++++-++++|.+.+.++++++..- .-..+.+. .|..+.... +.+.-....- ...++...
T Consensus 15 ~v~~~A~~~I~~l~~~dy~~i~~~~~~~lk~--------~Lt~e~l~-~~~~~~~~~-G~f~s~~~~~~~~~~~~~~~y~ 84 (114)
T 4hyz_A 15 TVRKQAMEDIEIAQSKDYESWKSRFTKDLQS--------SLTEESYD-SYLKILEKQ-GEFKEFGKCTYLGQIKDNKKYG 84 (114)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTBCHHHHT--------TCCHHHHH-HHHHHHHTT-CSEEEEEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHhCHHHHh--------hCCHHHHH-HHHHHHHhc-CCceeeeceeeeeeccCCCceE
Confidence 4667899999999999999999999998532 23568888 888866643 4444332222 34442333
Q ss_pred EEEEEEEeCCeeEeeeceEEEEEEEeeCCeEE
Q 029353 161 GVTWHLEWKGKPFPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 161 av~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~ 192 (194)
++.....+....+.+ .+.|| +||||.
T Consensus 85 vv~~~~~ye~~~~~f-----~i~Fd-~d~kl~ 110 (114)
T 4hyz_A 85 GVIIVVKYEEGNVNY-----SLAYD-EDMNLV 110 (114)
T ss_dssp EEEEEEEETTEEEEE-----EEEEC-TTSCEE
T ss_pred EEEEEEEEeccceEE-----EEEEC-CCCcEe
Confidence 345555555555544 34456 477764
No 108
>3hzp_A NTF2-like protein of unknown function; YP_291699.1, structural genomics, joint center structural genomics, JCSG; HET: MSE 1PE; 1.40A {Prochlorococcus marinus}
Probab=83.70 E-value=12 Score=28.16 Aligned_cols=100 Identities=13% Similarity=0.088 Sum_probs=64.2
Q ss_pred cHHHHHHHHHHHHhCC--CHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEE------EEEEecC
Q 029353 85 GGAVVVRRFYAGINGR--DLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVI------DDISAED 156 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~g--D~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i------~~via~G 156 (194)
+..+-+....+.|.+. +-+-+.+-.++|.+|..|.. -..+++...+++.. .++..+. +.+---+
T Consensus 3 ~~~~~i~~l~~~fa~~~~~~~f~~~n~hdDflFIrPsG--npItkegd~~m~~S------gdlv~e~~el~ki~~le~~~ 74 (131)
T 3hzp_A 3 SSKEEILSILEAFASTERMGSFFLDNATADFLFIRPSG--NPLDAKGFENMWSS------GDLVLESAEITKVHKFELLG 74 (131)
T ss_dssp CHHHHHHHHHHHHSSTTTTTTHHHHHBCTTCCEECTTS--CEECHHHHHHHHTS------SSEEEEEEEEEEEEEEEESS
T ss_pred chHHHHHHHHHHhhCHhhhhhhhhccCCcceEEEcCCC--CccchhhhHHhhcC------CCEEEEeecccceeeEEEcC
Confidence 4556677777766554 66779999999999998863 45588888777641 3333333 3443234
Q ss_pred CC-eEEE---EEEEEeCCeeEee-eceEEEEEEEeeCCeEEEC
Q 029353 157 SS-AVGV---TWHLEWKGKPFPF-SKGCSFYKLEVVNGKRQIT 194 (194)
Q Consensus 157 ~d-~Vav---~~~~e~~Gk~i~~-t~g~~~fr~~~~dGKI~i~ 194 (194)
++ ++++ .-.+++.|.+.+- .+...||+. .||.++|.
T Consensus 75 dt~A~v~~t~~~kfsYkG~pned~~~YtrVwKK--~d~~WKi~ 115 (131)
T 3hzp_A 75 SNAAICVFTLGSKFTYKGTQNDDLPTVTSIFKK--IDEKWKVA 115 (131)
T ss_dssp SSEEEEEEEEEEEEEETTEEEEEBCEEEEEEEE--ETTEEEEE
T ss_pred CceEEEEEEecceEEEcCccCCcceeeehhhhh--cCCcEEEE
Confidence 24 2222 3344678888653 136688888 79999883
No 109
>1vqq_A Saupbp2A, penicillin-binding protein MECA, low-affinity; beta-lactam, D- transpeptidase, D-carboxypeptidase, biosynthetic protein; 1.80A {Staphylococcus aureus} SCOP: d.17.4.5 d.175.1.1 e.3.1.1 PDB: 1mwu_A* 1mwr_A 1mws_A* 1mwt_A*
Probab=82.88 E-value=6.8 Score=36.55 Aligned_cols=97 Identities=9% Similarity=0.001 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhc-CCCcEEEEEEEEecCCCe--EEE
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSI-SSDLQFVIDDISAEDSSA--VGV 162 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~-~~d~~~~i~~via~G~d~--Vav 162 (194)
..+.+++|+++|+++|.+++.++.+++..- -..++++.+.++.++... ..++.+++..+...+++. |.+
T Consensus 4 ~~~~~~~f~~~~~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 75 (646)
T 1vqq_A 4 KDKEINNTIDAIEDKNFKQVYKDSSYISKS--------DNGEVEMTERPIKIYNSLGVKDINIQDRKIKKVSKNKKRVDA 75 (646)
T ss_dssp -CHHHHHHHHHHHTTCHHHHHHTBCHHHHH--------HHCHHHHHTHHHHHHHHHTCCCEEEEEEEEEEEETTEEEEEE
T ss_pred hHHHHHHHHHHHhcCCHHHHHHhhchhhhh--------cCCHHHHHHHHHHHHhhhccCCceEEeccccccCCCeEEEEE
Confidence 346789999999999999999998764211 124455555555555433 356777766553222234 333
Q ss_pred EEEEEeCCeeEeeeceEEEEEEEeeCCeEEE
Q 029353 163 TWHLEWKGKPFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 163 ~~~~e~~Gk~i~~t~g~~~fr~~~~dGKI~i 193 (194)
.+++.+....+.+. .---+.- .+++++|
T Consensus 76 ~~~~~~~~g~~~y~-~~~~l~~--~~~~w~v 103 (646)
T 1vqq_A 76 QYKIKTNYGNIDRN-VQFNFVK--EDGMWKL 103 (646)
T ss_dssp EEEEEETTEEEEEE-EEEEEEE--CSSSEEE
T ss_pred EEEEEeccceEEEc-ceEEEEE--cCCeEEE
Confidence 55554443456663 3322222 3555655
No 110
>3k7c_A Putative NTF2-like transpeptidase; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: PGE; 2.00A {Campylobacter jejuni}
Probab=78.88 E-value=17 Score=26.69 Aligned_cols=95 Identities=9% Similarity=0.043 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhh------hcCCCcE-EEEEEEEecCCC
Q 029353 86 GAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSD------SISSDLQ-FVIDDISAEDSS 158 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~------~~~~d~~-~~i~~via~G~d 158 (194)
+..+.++||+++-+||.+.+.+|++=+-. .. ....+-+..-+..+.. .-...+. ++++..-.++ +
T Consensus 9 P~~~ak~F~~~l~~GD~e~av~~i~~p~~------~~-~~~~e~~~gki~m~~~~~~~~~ekkGGi~~I~~~~~~~d~-~ 80 (114)
T 3k7c_A 9 PEDLAKNFTKDLYSGDTKSVMSYIDLSEA------KS-DEEKTFVSDKITQVVAENAAKAKRMGGVKDIQIEEKTINK-D 80 (114)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTBCCSSC------CS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEEEEECS-S
T ss_pred hHHHHHHHHHHHHcCCHHHHHhhccCCcc------cc-hhHHHHHHHHHHHHHHHHHHHHHHcCCcceEEEEEeeccC-C
Confidence 55788999999999999999999643211 10 1112222222221111 1123333 2233222344 6
Q ss_pred eEEEEEEEEe-CCeeEeeeceEEEEEEEeeCCeEEE
Q 029353 159 AVGVTWHLEW-KGKPFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 159 ~Vav~~~~e~-~Gk~i~~t~g~~~fr~~~~dGKI~i 193 (194)
.+.|++...+ +|+.-.. .+.++.. ||+|+|
T Consensus 81 ~A~V~v~v~~knG~t~~~--~i~LiK~---dG~WkV 111 (114)
T 3k7c_A 81 SAKIRVLVLFNNDNNQSS--NVFLAKK---DRKWLV 111 (114)
T ss_dssp EEEEEEEEEETTSCEEEE--EEEEEES---SSSEEE
T ss_pred EEEEEEEEEECCCCcccc--ceeeEEe---CCeEEE
Confidence 7777777766 4655322 4555555 898887
No 111
>1q42_A MTR2, mRNA transport regulator MTR2; NTF2-fold, nuclear export, translation; 1.75A {Candida albicans} SCOP: d.17.4.2 PDB: 1q40_A
Probab=55.84 E-value=12 Score=30.15 Aligned_cols=51 Identities=10% Similarity=-0.040 Sum_probs=37.9
Q ss_pred CcHHHHHHHHHHHHhCCC----------HHHHHhhh----cCCeEEEcCCCCCCc------cCHHHHHHHHHH
Q 029353 84 GGGAVVVRRFYAGINGRD----------LASVEELI----ADDCVYEDLIFPRPF------LGRKATLDFFKK 136 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD----------~dal~~L~----ApD~v~~dp~~~g~~------~Greair~~~~~ 136 (194)
...++.++.||+.++.++ ++.+..+| -+.+.+...+. ++ .|++++.++|..
T Consensus 27 r~aE~F~K~yyasLD~~r~~~~~~ql~~v~~f~~ly~~~l~~~a~liwNGn--p~~~~~~~~gr~~fqk~w~~ 97 (201)
T 1q42_A 27 QQLEPFLKRFLASLDLLYTQPTSQPFPNVESYATQLGSNLKRSSAIIVNGQ--PIIPSPQEDCKLQFQKKWLQ 97 (201)
T ss_dssp GTHHHHHHHHHHHHSCCCCCCTTCSSCCHHHHHTTTTTTEEEEEEEEETTE--ECCCCSSCCHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhcccccccchhhccchhHHHHHhccccCCccEEEEcCc--ccccccccccHHHHHHHHHh
Confidence 346789999999997665 56778888 66676554432 34 899999999985
No 112
>2i9w_A Hypothetical protein; cystatin-like fold, SEC-C motif fold, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.75A {Psychrobacter arcticus} SCOP: d.17.4.30 g.74.1.1 g.74.1.1
Probab=51.64 E-value=87 Score=24.71 Aligned_cols=89 Identities=9% Similarity=-0.035 Sum_probs=56.7
Q ss_pred cHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEe-cCCCeEEEE
Q 029353 85 GGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISA-EDSSAVGVT 163 (194)
Q Consensus 85 ~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via-~G~d~Vav~ 163 (194)
..++++|.=|.||.-+|++-|.+-.+|+.. | ..-++++.++.... -+ +..+|..... .+++...|+
T Consensus 52 taE~LMRSRYSAfvl~~~dYL~~T~hP~~r---~-----~~~~~~i~~~~~~~---~W--lgLeIl~~~~G~~~~~g~Ve 118 (184)
T 2i9w_A 52 TAEHLMRTRYSAFVLVKPEYIVKTTLPAQQ---D-----LLDIKAIENWAKET---DW--AGLEVVAHTPKLSKRHAQVE 118 (184)
T ss_dssp SHHHHHHHHHHHHHHTCHHHHHHTBCHHHH---T-----TCCHHHHHHHHHHS---EE--EEEEEEEEETTSSSSEEEEE
T ss_pred CHHHHHHHhHHHHHcccHHHHHHhcCcccC---c-----cccHHHHHhhccCC---ee--eceEEEEeecCCCCCccEEE
Confidence 378899999999999999999999999864 2 22456776655531 11 2233333321 122444445
Q ss_pred EEE--EeCCeeEeeeceEEEEEEEeeCC
Q 029353 164 WHL--EWKGKPFPFSKGCSFYKLEVVNG 189 (194)
Q Consensus 164 ~~~--e~~Gk~i~~t~g~~~fr~~~~dG 189 (194)
+.. ...|+...+ +..+-|.- ++|
T Consensus 119 F~A~y~~~g~~~~l-hErSrFvr--~~G 143 (184)
T 2i9w_A 119 FKAYFKTPDGLQAH-HELSTFVK--IKN 143 (184)
T ss_dssp EEEEEEETTEEEEE-EEEEEEEE--EEC
T ss_pred EEEEEecCCCccce-ehhcccee--cCC
Confidence 544 346777777 67777777 577
No 113
>2jq5_A SEC-C motif; structural genomics, PSI-2, structure initiative, northeast structural genomics consort NESG; NMR {Rhodopseudomonas palustris}
Probab=51.15 E-value=72 Score=23.58 Aligned_cols=92 Identities=15% Similarity=0.167 Sum_probs=58.3
Q ss_pred CcHHHHHHHHHHHHhCCCHHHHHhhhcCCeEEEcCCCCCCccCHHHHHHHHHHhhhhcCCCcEEEEEEEEecCCCeEEEE
Q 029353 84 GGGAVVVRRFYAGINGRDLASVEELIADDCVYEDLIFPRPFLGRKATLDFFKKFSDSISSDLQFVIDDISAEDSSAVGVT 163 (194)
Q Consensus 84 ~~~~~vVr~fyeA~n~gD~dal~~L~ApD~v~~dp~~~g~~~Greair~~~~~~~~~~~~d~~~~i~~via~G~d~Vav~ 163 (194)
....+++|.=|.|+..+|.+-|.+-.+|+.. |.+ .++.+.++.... -+ ...+|......+ ....|+
T Consensus 26 ~taE~LMRSRYsAyv~~~~dYL~~T~hP~~r---~~~-----~~~~~~~~~~~~---~W--~gL~I~~~~~g~-~~g~Ve 91 (128)
T 2jq5_A 26 ASPEALMRSRYAAYALKDFDYIVETTDPERR---DLF-----DHDVNRAWMEES---DF--LELRVLGSSEKG-SRGTVE 91 (128)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHTBCHHHH---TTC-----CHHHHHHHHHHE---EE--EEEEEEEEEEET-TEEEEE
T ss_pred CCHHHHHhhhceeeecCCcchhhhhcCcccC---Ccc-----chHHHHhhCcCC---ee--eeeEEEEEecCC-CCEEEE
Confidence 3478999999999999999999999999863 222 345555544321 11 123333333333 223344
Q ss_pred EEE--EeCCee-EeeeceEEEEEEEeeCCeEE
Q 029353 164 WHL--EWKGKP-FPFSKGCSFYKLEVVNGKRQ 192 (194)
Q Consensus 164 ~~~--e~~Gk~-i~~t~g~~~fr~~~~dGKI~ 192 (194)
+.. ..+|+. ... +..+-|.- +||++.
T Consensus 92 F~A~y~~~g~~~~~~-hE~SrF~r--~~g~W~ 120 (128)
T 2jq5_A 92 FIARFRRGGGPEQSH-HERSQFRK--ARGRWY 120 (128)
T ss_dssp EEEEEEESSSCEEEE-EEEEEEEE--ETTEEE
T ss_pred EEEEEEeCCCceeEE-EEeeeEEE--ECCEEE
Confidence 544 345776 666 67888888 799985
No 114
>3nv0_A Nuclear RNA export factor 2; NTF2-like domain, beta sheet heterodimer interface, nucleopo binding pocket, water mediated interface; 1.84A {Caenorhabditis elegans}
Probab=49.14 E-value=30 Score=27.64 Aligned_cols=31 Identities=10% Similarity=0.240 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHhCCC----HHHHHhhhc-CCeEEE
Q 029353 86 GAVVVRRFYAGINGRD----LASVEELIA-DDCVYE 116 (194)
Q Consensus 86 ~~~vVr~fyeA~n~gD----~dal~~L~A-pD~v~~ 116 (194)
..+.++.||..|+.+| -+.|+.+|+ +++.|.
T Consensus 16 v~~Fl~~yf~~yD~~d~~~~R~~Ll~~Y~~~~a~FS 51 (205)
T 3nv0_A 16 VEEFIITYYKIYDGADGQQTRKQLLDAYDTNNSTFT 51 (205)
T ss_dssp HHHHHHHHHHHHCSTTHHHHGGGGGGGBCSSSCEEE
T ss_pred HHHHHHHHHHHhcCCCchhhHHHHHHhhCccCcEEE
Confidence 3567899999999998 889999999 578776
No 115
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=34.86 E-value=14 Score=28.98 Aligned_cols=24 Identities=4% Similarity=0.147 Sum_probs=20.4
Q ss_pred HHHHHHHHhCCCHHHHHhhhcCCe
Q 029353 90 VRRFYAGINGRDLASVEELIADDC 113 (194)
Q Consensus 90 Vr~fyeA~n~gD~dal~~L~ApD~ 113 (194)
+....+||.+||++.|.++++|++
T Consensus 66 y~~Iq~A~~~gD~~~Lr~~~t~~~ 89 (194)
T 2cw9_A 66 IPNVLEAMISGELDILKDWCYEAT 89 (194)
T ss_dssp HHHHHHHHHHTCHHHHHHHBCHHH
T ss_pred HHHHHHHHHcCCHHHHHHhcCHHH
Confidence 355567999999999999999885
No 116
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=20.12 E-value=1.6e+02 Score=21.01 Aligned_cols=20 Identities=30% Similarity=0.531 Sum_probs=12.9
Q ss_pred eCCeeEeeeceEEEEEEEeeCCeEEE
Q 029353 168 WKGKPFPFSKGCSFYKLEVVNGKRQI 193 (194)
Q Consensus 168 ~~Gk~i~~t~g~~~fr~~~~dGKI~i 193 (194)
++|+.+-++ -|++ .|||++|
T Consensus 72 ~~Gk~y~Vt----r~~~--~ngk~~i 91 (102)
T 2pp6_A 72 LRGSEFTVT----RIRR--FNGKPQL 91 (102)
T ss_dssp ETTEEEEEE----EEEE--ETTEEEE
T ss_pred EcCcEEEEE----EEEE--ECCcEEE
Confidence 467777653 3444 4888887
Done!