BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029354
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9AKH1|FER2_RICRI 2Fe-2S ferredoxin OS=Rickettsia rickettsii GN=fdxB PE=3 SV=1
Length = 112
Score = 155 bits (392), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKL 137
I VTF+ DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI ++ ++YNKL
Sbjct: 5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVI-LEEEFYNKL 63
Query: 138 EDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAV 186
+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +PAATRN +
Sbjct: 64 KKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVHLPAATRNIKL 112
>sp|Q92J08|FER2_RICCN 2Fe-2S ferredoxin OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=fdxB PE=3 SV=1
Length = 112
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/109 (64%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKL 137
I VTF+ DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI ++ ++YNKL
Sbjct: 5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVI-LEEEFYNKL 63
Query: 138 EDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAV 186
+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ IPA TRN +
Sbjct: 64 KKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRIPATTRNIKL 112
>sp|Q9AKM6|FER2_RICMO 2Fe-2S ferredoxin OS=Rickettsia montana GN=fdxB PE=3 SV=1
Length = 112
Score = 154 bits (390), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKL 137
I VTF+ DGEEK ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHVI ++ ++YNKL
Sbjct: 5 IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVI-LEEEFYNKL 63
Query: 138 EDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAV 186
+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN +
Sbjct: 64 KKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRNIKL 112
>sp|Q4UKL2|FER2_RICFE 2Fe-2S ferredoxin OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=fdxB PE=3 SV=1
Length = 112
Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKL 137
I VTF+ DGEEK ++ P+G+S+LE H ND++LEGACEGSLAC+TCHVI ++ ++YNKL
Sbjct: 5 IKVTFIVNDGEEKTVEAPIGLSILEITHSNDLDLEGACEGSLACATCHVI-LEEEFYNKL 63
Query: 138 EDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAV 186
+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN +
Sbjct: 64 KKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRNIKL 112
>sp|Q9AKC4|FER2_RICTY 2Fe-2S ferredoxin OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=fdxB PE=3 SV=1
Length = 117
Score = 151 bits (382), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 93/112 (83%), Gaps = 1/112 (0%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKL 137
I VTF+ D EEK ++ P+G+S+LE AH N+++LEGACEGSLAC+TCHV+ ++ ++YNKL
Sbjct: 5 IKVTFIINDEEEKTVEAPIGLSILEIAHSNNLDLEGACEGSLACATCHVM-LEEEFYNKL 63
Query: 138 EDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 189
+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN +G+
Sbjct: 64 KKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRNINYNGF 115
>sp|Q9ZDW6|FER2_RICPR 2Fe-2S ferredoxin OS=Rickettsia prowazekii (strain Madrid E)
GN=fdxB PE=3 SV=1
Length = 112
Score = 149 bits (376), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKL 137
I VTF+ D EE+ ++ P+G+S+LE AH ND++LEGACEGSLAC+TCHV+ ++ ++YNKL
Sbjct: 5 IKVTFIINDEEERTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVM-LEEEFYNKL 63
Query: 138 EDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAV 186
+ PT+ E DMLDLAFGLT+TSRLGCQI+ + ELDGI++ +P+ATRN +
Sbjct: 64 KKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRNIKL 112
>sp|Q08C57|ADXL_DANRE Adrenodoxin-like protein, mitochondrial OS=Danio rerio GN=fdx1l
PE=2 SV=1
Length = 195
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 115/194 (59%), Gaps = 11/194 (5%)
Query: 7 LRVGAFMVKELSRGG-----CTSISRTGCTRQHWRPFIELQSVP-RVFQGSIFQKYPHFS 60
+R G + L+R C + CT R ++ S P R + SI S
Sbjct: 7 VRAGVNFTQRLNRISPVCRVCPLLRLNRCTGAAVRRAVDGFSAPSRRLRTSIGVCQSEDS 66
Query: 61 TTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLA 120
+ E DA + Q+ ++NV ++D+ G ++ VG ++L AH++ I+LEGACE SLA
Sbjct: 67 SAPEEDA----HAQEHIVNVVYIDRSGRRIPVQARVGDNVLYLAHKHGIDLEGACEASLA 122
Query: 121 CSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 180
CSTCHV V +Y++L +P + E+DMLD+A L E SRLGCQI+ +PELDG+ L +P
Sbjct: 123 CSTCHVYVSS-GHYDRLPEPEEREDDMLDMAPLLQENSRLGCQIILTPELDGMELTLPKV 181
Query: 181 TRNFAVDGYVPKPH 194
TRNF VDG+VPKPH
Sbjct: 182 TRNFYVDGHVPKPH 195
>sp|Q6P4F2|ADXL_HUMAN Adrenodoxin-like protein, mitochondrial OS=Homo sapiens GN=FDX1L
PE=1 SV=1
Length = 183
Score = 137 bits (346), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 106/184 (57%), Gaps = 3/184 (1%)
Query: 13 MVKELSRGGCTSISRTGCTRQHW--RPFIELQSVPRVFQGSIFQKYPHFSTTAENDASHG 70
M ++RGG ++ R W RP S V G+ + S A + + G
Sbjct: 1 MAASMARGGVSARVLLQAARGTWWNRPGGTSGSGEGVALGTTRKFQATGSRPAGEEDAGG 60
Query: 71 SNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMD 130
+ D++NV FVD+ G+ + VG ++L A + ++LEGACE SLACSTCHV V +
Sbjct: 61 PERPGDVVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGVDLEGACEASLACSTCHVYVSE 120
Query: 131 MDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGYV 190
D+ + L P + E+DMLD+A L E SRLGCQIV +PEL+G +P TRNF VDG+V
Sbjct: 121 -DHLDLLPPPEEREDDMLDMAPLLQENSRLGCQIVLTPELEGAEFTLPKITRNFYVDGHV 179
Query: 191 PKPH 194
PKPH
Sbjct: 180 PKPH 183
>sp|Q1RJ69|FER2_RICBR 2Fe-2S ferredoxin OS=Rickettsia bellii (strain RML369-C) GN=fdxB
PE=3 SV=1
Length = 111
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 90/107 (84%), Gaps = 1/107 (0%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKL 137
I VTFV +GEEK I+ P+G+S+LE AH N I+LEGACEGSLAC+TCHVI ++ ++YNKL
Sbjct: 5 IKVTFVINNGEEKIIEAPLGLSILEVAHSNSIDLEGACEGSLACATCHVI-LEEEFYNKL 63
Query: 138 EDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNF 184
E P +EE DMLDLAFGLT+TSRLGCQI+ + +LDGI++ +P+ATRN
Sbjct: 64 EKPKEEEEDMLDLAFGLTDTSRLGCQIILTEKLDGIKVRLPSATRNI 110
>sp|Q9CPW2|ADXL_MOUSE Adrenodoxin-like protein, mitochondrial OS=Mus musculus GN=Fdx1l
PE=2 SV=1
Length = 174
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 98/154 (63%), Gaps = 7/154 (4%)
Query: 45 PRVFQGSIFQKYPHFSTTAEN----DASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSM 100
PR ++ + F TT E +A+ +D++NV FVD+ G+ ++ VG ++
Sbjct: 24 PRAGHAAVTSRT--FGTTGERRAGEEAADSPELPRDVVNVVFVDRSGKRIPVRGKVGDNV 81
Query: 101 LEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRL 160
L A + ++LEGACE SLACSTCHV V + + + L P + E+DMLD+A L E SRL
Sbjct: 82 LYLAQRHGVDLEGACEASLACSTCHVYVSEA-HLDLLPPPEEREDDMLDMAPLLQENSRL 140
Query: 161 GCQIVASPELDGIRLAIPAATRNFAVDGYVPKPH 194
GCQIV +PEL+G+ A+P TRNF VDG++PKPH
Sbjct: 141 GCQIVLTPELEGVEFALPKITRNFYVDGHIPKPH 174
>sp|Q5FWQ0|ADXL_XENLA Adrenodoxin-like protein, mitochondrial OS=Xenopus laevis GN=fdx1l
PE=2 SV=1
Length = 193
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
Query: 63 AENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACS 122
AEN + S ++ + V F+D+ G+ +K VG S+L AH +IELEGACE SLACS
Sbjct: 66 AENQRAELS---EETVEVVFLDRSGQRIPVKGKVGESVLCLAHRYNIELEGACESSLACS 122
Query: 123 TCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATR 182
TCHV V + +Y++KL +P + E+DMLD+A L E SRLGCQI+ + +L+G +P TR
Sbjct: 123 TCHVYV-NTEYFHKLPEPDEREDDMLDMAPLLQENSRLGCQIILTKQLNGAEFTLPKITR 181
Query: 183 NFAVDGYVPKPH 194
NF VDG+VPKPH
Sbjct: 182 NFYVDGHVPKPH 193
>sp|P37193|ADXH_DROME Adrenodoxin-like protein, mitochondrial OS=Drosophila melanogaster
GN=Fdxh PE=2 SV=3
Length = 172
Score = 133 bits (334), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 94/144 (65%), Gaps = 7/144 (4%)
Query: 57 PHFSTTAENDASHGSNKQKD------MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE 110
PH + HG + +D ++N+T+VDKDG+ ++ VG ++L AH + IE
Sbjct: 30 PHNALHTTIPRRHGEFEWQDPKSTDEIVNITYVDKDGKRTKVQGKVGDNVLYLAHRHGIE 89
Query: 111 LEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPEL 170
+EGACE SLAC+TCHV V DY KL++ ++E+D+LD+A L E SRLGCQI+ +
Sbjct: 90 MEGACEASLACTTCHVYVQH-DYLQKLKEAEEQEDDLLDMAPFLRENSRLGCQILLDKSM 148
Query: 171 DGIRLAIPAATRNFAVDGYVPKPH 194
+G+ L +P ATRNF VDG+ PKPH
Sbjct: 149 EGMELELPKATRNFYVDGHKPKPH 172
>sp|Q05B51|ADXL_BOVIN Adrenodoxin-like protein, mitochondrial OS=Bos taurus GN=FDX1L PE=2
SV=1
Length = 186
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 103/190 (54%), Gaps = 15/190 (7%)
Query: 13 MVKELSRGGCTSISRTGCTRQHWRPFIELQSVPRVFQGSIFQKYPHF--------STTAE 64
M ++ GG + R W S P F GS P S A
Sbjct: 4 MAASVAWGGVNAGFLLRAARGAW------WSRPGGFWGSGEAAAPAIARKFRATGSRPAG 57
Query: 65 NDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTC 124
+ + G + D++NV FVD+ G+ + VG ++L A + ++LEGACE SLACSTC
Sbjct: 58 EEEAGGPERPGDVVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGLDLEGACEASLACSTC 117
Query: 125 HVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRNF 184
HV V + D+ + L P + E+DMLD+A L E SRLGCQIV +PEL+G +P TRNF
Sbjct: 118 HVYVSE-DHLDLLPPPDEREDDMLDMAPLLQENSRLGCQIVLTPELEGAEFTLPKITRNF 176
Query: 185 AVDGYVPKPH 194
VDG+VPKPH
Sbjct: 177 YVDGHVPKPH 186
>sp|Q12184|ADRX_YEAST Adrenodoxin homolog, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAH1 PE=1 SV=1
Length = 172
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
Query: 59 FSTTAENDASHGSN-KQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEG 117
FST++ + H K + + +TF+ KDG +K +V G ++L+ A +++++EGAC G
Sbjct: 41 FSTSSFLNHGHLKKPKPGEELKITFILKDGSQKTYEVCEGETILDIAQGHNLDMEGACGG 100
Query: 118 SLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAI 177
S ACSTCHVIV D DYY+ L +P D+ENDMLDLA+GLTETSRLGCQI S ++DGIR+A+
Sbjct: 101 SCACSTCHVIV-DPDYYDALPEPEDDENDMLDLAYGLTETSRLGCQIKMSKDIDGIRVAL 159
Query: 178 PAATRN 183
P TRN
Sbjct: 160 PQMTRN 165
>sp|Q8SV19|ADRX_ENCCU Adrenodoxin homolog OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU07_0600 PE=3 SV=1
Length = 128
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Query: 93 KVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAF 152
K G ++L+ AH+N ++LEGACEG+LACSTCHVI ++ Y KL +P+D+E D++D AF
Sbjct: 28 KAVCGSTVLDVAHKNGVDLEGACEGNLACSTCHVI-LEEPLYRKLGEPSDKEYDLIDQAF 86
Query: 153 GLTETSRLGCQIVASPELDGIRLAIPAATRNFAVDGYVPKPH 194
G T TSRLGCQ+ + +P AT+N AVDG+ PKPH
Sbjct: 87 GATGTSRLGCQLRVDKSFENAVFTVPRATKNMAVDGFKPKPH 128
>sp|P00258|ADX_PIG Adrenodoxin, mitochondrial OS=Sus scrofa GN=FDX1 PE=1 SV=2
Length = 186
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
Query: 29 GCTRQHWRPFIELQSVPRVFQGSIFQKYPHFSTTAE--NDASHGSNKQKDMINVTFVDKD 86
G T W+P + ++ R GSI+ + A + ++ + +D I V F+++D
Sbjct: 14 GDTAVRWQPLVGPRAGNRGPGGSIWLGLGGRAAAARTLSLSARAWSSSEDKITVHFINRD 73
Query: 87 GEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDPTDEE 144
G+ + VG S+L+ EN+++++G ACEG+LACSTCH+I D + KLE TDEE
Sbjct: 74 GKTLTTQGKVGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFED-HIFEKLEAITDEE 132
Query: 145 NDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 180
NDMLDLA+GLT+ SRLGCQI + +D + + +P A
Sbjct: 133 NDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPEA 168
>sp|P29330|ADX_SHEEP Adrenodoxin OS=Ovis aries GN=FDX1 PE=1 SV=2
Length = 128
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 3/111 (2%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMD 132
+D + V F+++DGE K VG S+L+ EN+++++G ACEG+LACSTCH+I +
Sbjct: 4 EDKVTVNFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLI-FEQH 62
Query: 133 YYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAATRN 183
Y KLE TDEENDMLDLA+GLT+ SRLGCQI + +D + + +P A +
Sbjct: 63 IYEKLEAITDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPDAVSD 113
>sp|P10109|ADX_HUMAN Adrenodoxin, mitochondrial OS=Homo sapiens GN=FDX1 PE=1 SV=1
Length = 184
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMD 132
+D I V F+++DGE K VG S+L+ EN+++++G ACEG+LACSTCH+I D
Sbjct: 64 EDKITVHFINRDGETLTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDH- 122
Query: 133 YYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIP 178
Y KL+ TDEENDMLDLA+GLT+ SRLGCQI + +D + + +P
Sbjct: 123 IYEKLDAITDEENDMLDLAYGLTDRSRLGCQICLTKSMDNMTVRVP 168
>sp|P00257|ADX_BOVIN Adrenodoxin, mitochondrial OS=Bos taurus GN=FDX1 PE=1 SV=2
Length = 186
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
Query: 29 GCTRQHWRPFIELQSVPRVFQGSI------FQKYPHFSTTAENDASHGSNKQKDMINVTF 82
G T WR L + PR G + +T + + + +D I V F
Sbjct: 14 GDTAGRWR----LLARPRAGAGGLRGSRGPGLGGGAVATRTLSVSGRAQSSSEDKITVHF 69
Query: 83 VDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMDYYNKLEDP 140
+++DGE K +G S+L+ +N+++++G ACEG+LACSTCH+I + + KLE
Sbjct: 70 INRDGETLTTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLI-FEQHIFEKLEAI 128
Query: 141 TDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 180
TDEENDMLDLA+GLT+ SRLGCQI + +D + + +P A
Sbjct: 129 TDEENDMLDLAYGLTDRSRLGCQICLTKAMDNMTVRVPDA 168
>sp|P46656|ADX_MOUSE Adrenodoxin, mitochondrial OS=Mus musculus GN=Fdx1 PE=2 SV=1
Length = 188
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 75/108 (69%), Gaps = 3/108 (2%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMD 132
+D I V F ++DGE K +G S+L+ EN+++++G ACEG+LACSTCH+I D
Sbjct: 68 EDKITVHFKNRDGETLTTKGKIGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFEDH- 126
Query: 133 YYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 180
Y KL+ TDEENDMLDLAFGLT+ SRLGCQ+ + +D + + +P A
Sbjct: 127 IYEKLDAITDEENDMLDLAFGLTDRSRLGCQVCLTKAMDNMTVRVPEA 174
>sp|P24483|ADX_RAT Adrenodoxin, mitochondrial OS=Rattus norvegicus GN=Fdx1 PE=2 SV=1
Length = 188
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 75 KDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTCHVIVMDMD 132
+D + V F ++DGE K VG S+L+ EN+++++G ACEG+LACSTCH+I D
Sbjct: 68 EDKVTVHFKNRDGETLTTKGKVGDSLLDVVIENNLDIDGFGACEGTLACSTCHLIFED-H 126
Query: 133 YYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 180
Y KL+ TDEENDMLDLAFGLT SRLGCQ+ + +D + + +P A
Sbjct: 127 IYEKLDAITDEENDMLDLAFGLTNRSRLGCQVCLTKAMDNMTVRVPEA 174
>sp|Q10361|ETP1_SCHPO Electron transfer protein 1, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=etp1 PE=1 SV=2
Length = 616
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Query: 112 EGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELD 171
EGACEGS+ACSTCHVIV D ++Y L+ P ++E DMLDLAFGL ETSRLGCQ++ +LD
Sbjct: 538 EGACEGSVACSTCHVIV-DPEHYELLDPPEEDEEDMLDLAFGLEETSRLGCQVLLRKDLD 596
Query: 172 GIRLAIPAATRNFAVD 187
GIR+ IPA TRN ++
Sbjct: 597 GIRVRIPAQTRNIRLE 612
>sp|P13216|ADX_CHICK Adrenodoxin, mitochondrial (Fragment) OS=Gallus gallus GN=FDX1 PE=1
SV=1
Length = 143
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
Query: 67 ASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEG--ACEGSLACSTC 124
++ + +D I V F+++DG++ K G S+L+ EN+++++G ACEG+LACSTC
Sbjct: 15 SARAACSSEDKITVHFINRDGDKLTAKGKPGDSLLDVVVENNLDIDGFGACEGTLACSTC 74
Query: 125 HVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 180
H+I D + KL+ TDEE DMLDLA+GLTETSRLGCQI +D + + +P A
Sbjct: 75 HLIFEDH-IFEKLDAITDEEMDMLDLAYGLTETSRLGCQICLKKSMDNMTVRVPEA 129
>sp|P37098|FER2_CAUCR 2Fe-2S ferredoxin OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=fdxB PE=3 SV=1
Length = 106
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIVMDMDYYN 135
M +T++ DG E+ I V G++++E A +N++ ++ C G+ AC+TCHV V D + +
Sbjct: 1 MAKITYIQHDGAEQVIDVKPGLTVMEGAVKNNVPGIDADCGGACACATCHVYV-DEAWLD 59
Query: 136 KLEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIP 178
K D + E MLD A + SRL CQI S LDG+ + +P
Sbjct: 60 KTGDKSAMEESMLDFAENVEPNSRLSCQIKVSDALDGLVVRLP 102
>sp|P44428|FER_HAEIN 2Fe-2S ferredoxin OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=fdx PE=3 SV=2
Length = 113
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 92 IKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLA 151
+ G ++LE AH +E+ AC+GS AC+TCHVIV + ++ L + +D+E DMLD A
Sbjct: 19 VDAATGDNLLEVAHNAGVEIHHACDGSCACTTCHVIV--REGFDSLNETSDQEEDMLDKA 76
Query: 152 FGLTETSRLGCQIVASPELDGIRLAIPAATRNFA 185
+GL SRL CQ V E + + IP N A
Sbjct: 77 WGLEMDSRLSCQCVVGNE--DLVVEIPKYNLNHA 108
>sp|Q51383|FER_PSEAE 2Fe-2S ferredoxin OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=fdx PE=3 SV=2
Length = 112
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDE-ENDMLDLAFGLT 155
G ++L+AA N IE+E ACE S AC+TCHVIV + + +E P+DE E+DMLD A+GL
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHVIV--REGLDSME-PSDELEDDMLDKAWGLE 80
Query: 156 ETSRLGCQIVASPELDGIRLAIPAATRNFAVDGY 189
SRL CQ V + E + + IP T N +G+
Sbjct: 81 PDSRLSCQAVVADE--DLVVEIPKYTINQVSEGH 112
>sp|P00259|PUTX_PSEPU Putidaredoxin OS=Pseudomonas putida GN=camB PE=1 SV=3
Length = 107
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDI-ELEGACEGSLACSTCHVIVMDMDYYN 135
M V +V DG + + V G+S+++AA N I ++ G C GS +C+TCHV V + + +
Sbjct: 1 MSKVVYVSHDGTRRELDVADGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEA-FTD 59
Query: 136 KLEDPTDEENDMLDLAFG-LTETSRLGCQIVASPELDGIRLAIP 178
K+ + E ML+ L SRL CQI+ +PELDGI + +P
Sbjct: 60 KVPAANEREIGMLECVTAELKPNSRLCCQIIMTPELDGIVVDVP 103
>sp|P0A9R6|FER_SHIFL 2Fe-2S ferredoxin OS=Shigella flexneri GN=fdx PE=3 SV=2
Length = 111
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTE 156
G ++L+AA N IE+E ACE S AC+TCH IV + ++ L + +++E+DMLD A+GL
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHCIV--REGFDSLPESSEQEDDMLDKAWGLEP 81
Query: 157 TSRLGCQIVASPELDGIRLAIPAATRNFA 185
SRL CQ + E + + IP T N A
Sbjct: 82 ESRLSCQARVTDE--DLVVEIPRYTINHA 108
>sp|P0A9R4|FER_ECOLI 2Fe-2S ferredoxin OS=Escherichia coli (strain K12) GN=fdx PE=1 SV=2
Length = 111
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTE 156
G ++L+AA N IE+E ACE S AC+TCH IV + ++ L + +++E+DMLD A+GL
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHCIV--REGFDSLPESSEQEDDMLDKAWGLEP 81
Query: 157 TSRLGCQIVASPELDGIRLAIPAATRNFA 185
SRL CQ + E + + IP T N A
Sbjct: 82 ESRLSCQARVTDE--DLVVEIPRYTINHA 108
>sp|P0A9R5|FER_ECO57 2Fe-2S ferredoxin OS=Escherichia coli O157:H7 GN=fdx PE=3 SV=2
Length = 111
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTE 156
G ++L+AA N IE+E ACE S AC+TCH IV + ++ L + +++E+DMLD A+GL
Sbjct: 24 GETILDAALRNGIEIEHACEKSCACTTCHCIV--REGFDSLPESSEQEDDMLDKAWGLEP 81
Query: 157 TSRLGCQIVASPELDGIRLAIPAATRNFA 185
SRL CQ + E + + IP T N A
Sbjct: 82 ESRLSCQARVTDE--DLVVEIPRYTINHA 108
>sp|P43493|THCC_RHOER Rhodocoxin OS=Rhodococcus erythropolis GN=thcC PE=1 SV=2
Length = 107
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIVMDMDYYN 135
M VT+V DG + ++VP G +++AA I+ + C G C+TCHV V + + +
Sbjct: 1 MPTVTYVHPDGTKHEVEVPTGKRVMQAAIGAGIDGIVAECGGQAMCATCHVYV-ESPWAD 59
Query: 136 KLEDPTDEENDMLDLAFG-LTETSRLGCQIVASPELDGIRLAIP 178
K ++EE++MLD TE SRL CQ+V S ++DG+ + +P
Sbjct: 60 KFPSISEEEDEMLDDTVSPRTEASRLSCQLVVSDDVDGLIVRLP 103
>sp|O51882|FER_BUCAP 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=fdx PE=3 SV=1
Length = 111
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTE 156
G ++L A +N+I+LE ACE S ACSTCH I+ + L +++E D+LD A+GL
Sbjct: 24 GETILNVALKNNIKLEHACEKSCACSTCHCIIRKG--FLSLSGWSEKEEDVLDKAWGLES 81
Query: 157 TSRLGCQIVASPELDGIRLAIPAATRNFAVD 187
TSRL CQ + +D I + IP N+ ++
Sbjct: 82 TSRLSCQAIIG-NID-IEVQIPLYNTNYIIE 110
>sp|P57661|FER_BUCAI 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=fdx PE=3 SV=1
Length = 111
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTE 156
G ++L A N+I+LE ACE S ACSTCH I+ + L +++E+D+LD A+GL
Sbjct: 24 GETILTVALRNNIKLEHACEQSCACSTCHCIIKKG--FFSLSGWSEKEDDILDKAWGLQS 81
Query: 157 TSRLGCQIVASPELDGIRLAIPAATRNFAVD 187
SRL CQ V I + IP N+ V+
Sbjct: 82 ESRLSCQAVIGK--SDIEVEIPLYNLNYTVE 110
>sp|P80306|FER6_RHOCA Ferredoxin-6 OS=Rhodobacter capsulatus PE=1 SV=1
Length = 106
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Query: 79 NVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIVMDMDYYNKL 137
+ F++ +G ++ G++++EAA +N + ++ C G+ ACSTCH V D + +KL
Sbjct: 2 KIIFIEHNGTRHEVEAKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYV-DPAWVDKL 60
Query: 138 EDPTDEENDMLDLAFGLT-ETSRLGCQIVASPELDGIRLAIP 178
E DM+D A+ TSRL CQI + LDG+ + +P
Sbjct: 61 PKALPTETDMIDFAYEPNPATSRLTCQIKVTSLLDGLVVHLP 102
>sp|D5IGG4|CARAC_SPHSX Ferredoxin CarAc OS=Sphingomonas sp. GN=carAc PE=1 SV=1
Length = 109
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 78 INVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIVMDMDYYNK 136
+ V F G E ++ G+S++EAA N ++ +E C G+ AC+TCHV V ++ +
Sbjct: 5 VRVIFRAAGGFEHLVETEAGVSLMEAAVLNGVDGIEAVCGGACACATCHVYV-GPEWLDA 63
Query: 137 LEDPTDEENDMLDLAFGLTETSRLGCQIVASPELDGIRLAIPAA 180
L+ P++ E++MLD SRL CQI + LDG+ L +P A
Sbjct: 64 LKPPSETEDEMLDCVAERAPHSRLSCQIRLTDLLDGLTLELPKA 107
>sp|Q89A15|FER_BUCBP 2Fe-2S ferredoxin OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=fdx PE=3 SV=1
Length = 107
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 97 GMSMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTE 156
G S+L A N++E+E ACE S C+TCH + + L ++E D+LD A+ L
Sbjct: 24 GESILNVALRNNVEIEHACEKSCVCTTCHCYIWKGA--SSLSICEEKEEDVLDKAWNLQF 81
Query: 157 TSRLGCQIVASPELDGIRLAIPAATRN 183
SRL CQ A I + IP T N
Sbjct: 82 NSRLSCQ--AKINNKDIEIEIPKYTIN 106
>sp|P33007|TERPB_PSESP Terpredoxin OS=Pseudomonas sp. GN=terPB PE=1 SV=2
Length = 106
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 77 MINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIE-LEGACEGSLACSTCHVIVMDMDYYN 135
M V F+D+ E + G S++E A +N + + C GS C+TC + + D +
Sbjct: 1 MPRVVFIDEQSGEYAVDAQDGQSLMEVATQNGVPGIVAECGGSCVCATCRIEIEDA-WVE 59
Query: 136 KLEDPTDEENDML-DLAFGLTETSRLGCQIVASPELDG--IRLAIPA 179
+ + +END+L +T +RL CQ+ P +DG +R+ +PA
Sbjct: 60 IVGEANPDENDLLQSTGEPMTAGTRLSCQVFIDPSMDGLIVRVPLPA 106
>sp|Q605A0|NQRF_METCA Na(+)-translocating NADH-quinone reductase subunit F
OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB
11132 / Bath) GN=nqrF PE=3 SV=1
Length = 407
Score = 37.0 bits (84), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMD 130
E+ I VP+G +L A +N++ + AC G C+ C V V++
Sbjct: 42 ERTIHVPIGSKLLTALADNNLFVSSACGGGGTCAQCRVQVLE 83
>sp|A6V3A2|NQRF_PSEA7 Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain PA7) GN=nqrF PE=3 SV=1
Length = 407
Score = 35.4 bits (80), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMD 130
E ++ VP G +L+ N++ L AC G C+ C +V+D
Sbjct: 44 EHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVVD 85
>sp|P59799|FER5_AQUAE 2Fe-2S ferredoxin-5 OS=Aquifex aeolicus (strain VF5) GN=fdx5 PE=1
SV=2
Length = 96
Score = 33.5 bits (75), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 99 SMLEAAHENDIELEGACEGSLACSTCHVIVMDMDYYNKLEDPTDEENDMLDLAFGLTETS 158
++++ + N IE++ AC G C++C V+++ L EE D L+ ET
Sbjct: 20 TIMQILYRNGIEIDSACGGHGQCTSCKVLIISGS--ENLYPAEFEEKDTLEENGMDPETE 77
Query: 159 RLGCQ 163
RL CQ
Sbjct: 78 RLSCQ 82
>sp|Q9HZL1|NQRF_PSEAE Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=nqrF PE=3 SV=1
Length = 407
Score = 33.5 bits (75), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMD 130
E ++ VP G +L+ N++ L AC G C+ C +V++
Sbjct: 44 EHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVVE 85
>sp|Q02PF8|NQRF_PSEAB Na(+)-translocating NADH-quinone reductase subunit F OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=nqrF PE=3 SV=1
Length = 407
Score = 33.5 bits (75), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 89 EKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMD 130
E ++ VP G +L+ N++ L AC G C+ C +V++
Sbjct: 44 EHSLTVPAGGKLLQTLATNNVFLSSACGGGGTCAQCKCVVVE 85
>sp|Q54GQ6|ACOX1_DICDI Peroxisomal acyl-coenzyme A oxidase 1 OS=Dictyostelium discoideum
GN=acox1 PE=3 SV=1
Length = 700
Score = 31.6 bits (70), Expect = 3.3, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 51 SIFQKYPHFSTTAENDASHGSNKQKDMINVTFVDKDGE 88
S F+ Y +F + ++ + HGSN Q TF+ + GE
Sbjct: 133 SKFENYQYFGSYSQTEIGHGSNVQGIETTCTFIKETGE 170
>sp|Q05182|PHT2_PSEPU Phthalate 4,5-dioxygenase oxygenase reductase subunit
OS=Pseudomonas putida GN=pht2 PE=2 SV=1
Length = 324
Score = 31.2 bits (69), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Query: 45 PRVFQGSIFQKYPHFSTTAENDASHGSNKQKDMINVTFVDKDGEEK-NIKVPVGMSMLEA 103
PR S+ H+ + + S G ++ + N F G ++++PV S+LE
Sbjct: 204 PRPLMDSVLDMTGHWPPGSIHFESFGVDQSRFAENRPFSVTLGRSGIDLEIPVDRSILEV 263
Query: 104 AHENDIELEGACEGSLACSTCHVIVMDMDY-YNKLEDPTDEENDML 148
+N I +CE S C +C +++ D + + DE++D +
Sbjct: 264 LRDNGIRAPSSCE-SGTCGSCRTRLIEGDVEHRDMVLREDEQHDQI 308
>sp|P13106|FER_BUMFI Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1
Length = 98
Score = 31.2 bits (69), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 79 NVTFVDKDGEEKNI----KVPVGMSMLEAAHENDIELEGACEGSLACSTC 124
+VT V+ EEKNI K P +L+AA E IEL +C ACSTC
Sbjct: 4 SVTLVN---EEKNINAVIKCPDDQFILDAAEEQGIELPYSCRAG-ACSTC 49
>sp|P94044|FER6_MAIZE Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1
Length = 155
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 79 NVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGACEGSLACSTC 124
V V DG E + P +LEAA +EL +C +CSTC
Sbjct: 62 KVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAG-SCSTC 106
>sp|P27788|FER3_MAIZE Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1
Length = 152
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 55 KYPHFSTTAENDASHGSNKQKDMINVTFVDKDGEEKNIKVPVGMSMLEAAHENDIELEGA 114
K P T+ + D S + + V V +GEE P +L+AA +EL +
Sbjct: 40 KVPSLKTSKKLDVSAMA-----VYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYS 94
Query: 115 CEGSLACSTC 124
C ACSTC
Sbjct: 95 CRAG-ACSTC 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,522,689
Number of Sequences: 539616
Number of extensions: 2918994
Number of successful extensions: 6454
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6344
Number of HSP's gapped (non-prelim): 77
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)