BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029355
(194 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255576768|ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
gi|223531260|gb|EEF33103.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
Length = 213
Score = 291 bits (746), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 163/190 (85%), Gaps = 1/190 (0%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
MSSLA +FA LRV +S ++ ++S V+G+QRS K YS+ SF G+ND +E+D+ FDD
Sbjct: 1 MSSLAVKFAKFLRV-SSPAATTSSPVVGLQRSFKTLYSTESFSGENDVGKNNELDEEFDD 59
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
F+ EK ELQ QGVDPR+GWGFRGVHKAIICGKV PVQKILRNG+TVTIF+VGTGG+FD
Sbjct: 60 FLGEKPELQIQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFD 119
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QRIVG+KDLPKP QWHRIAVHNE LG+YAV+QL KNSSVYVEG+IE RVYNDSI+GEVKN
Sbjct: 120 QRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVKN 179
Query: 181 IPEICIRRDG 190
IPEICIRRDG
Sbjct: 180 IPEICIRRDG 189
>gi|224125080|ref|XP_002319495.1| predicted protein [Populus trichocarpa]
gi|222857871|gb|EEE95418.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/190 (68%), Positives = 160/190 (84%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
MSSL RFA LLRVP+ ++SL +G+QRS + YS+ SF+ N++ D+V++ FDD
Sbjct: 1 MSSLVLRFAKLLRVPSPVIMPTSSLGVGLQRSLRSCYSTVSFNSDNEEGKNDKVEEEFDD 60
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
+ +++E + QGVDPR+GW FRGVH+AIICGKV PVQKILRNG+TVTIF+VGTGG+FD
Sbjct: 61 LLGDRRESRFQGVDPRKGWEFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFD 120
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QRI+GSKDLPKP QWHRIAVHN+ LG+YAV+QL KNSSVYVEGDIEIRVYNDSI+GEVKN
Sbjct: 121 QRIIGSKDLPKPAQWHRIAVHNDSLGAYAVQQLAKNSSVYVEGDIEIRVYNDSISGEVKN 180
Query: 181 IPEICIRRDG 190
IPEIC+RRDG
Sbjct: 181 IPEICVRRDG 190
>gi|449435603|ref|XP_004135584.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 151/190 (79%), Gaps = 4/190 (2%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
M+S+A RF N R P SS+ ++S V Q SSK W S+G+ +G ND + D +D +D
Sbjct: 1 MNSVAMRFLNRFRTP-SSNFPTSSFVASAQTSSKFWLSTGASEGDNDVEKNDGEEDDYDT 59
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
F ELQPQGVDP RGWG+RGVHKAIICG+V PVQKILRNG+T+TIF+VGTGG++D
Sbjct: 60 F---SNELQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYD 116
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QRI +DLPKP QWHRIAVHNE+LG+YAV++L +N+SVYVEGDIE RVYNDSINGEVKN
Sbjct: 117 QRIFDGRDLPKPAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKN 176
Query: 181 IPEICIRRDG 190
IPEIC+RRDG
Sbjct: 177 IPEICVRRDG 186
>gi|449485644|ref|XP_004157233.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 214
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/190 (65%), Positives = 151/190 (79%), Gaps = 4/190 (2%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
M+S+A RF N R P SS+ ++S V Q +SK W S+G+ +G ND + D +D +D
Sbjct: 1 MNSVAMRFLNRFRTP-SSNFPTSSFVASAQTNSKFWLSTGASEGDNDVEKNDGEEDDYDT 59
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
F ELQPQGVDP RGWG+RGVHKAIICG+V PVQKILRNG+T+TIF+VGTGG++D
Sbjct: 60 F---SNELQPQGVDPTRGWGYRGVHKAIICGRVGQAPVQKILRNGRTITIFTVGTGGMYD 116
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QRI +DLPKP QWHRIAVHNE+LG+YAV++L +N+SVYVEGDIE RVYNDSINGEVKN
Sbjct: 117 QRIFDGRDLPKPAQWHRIAVHNELLGAYAVQKLCRNASVYVEGDIETRVYNDSINGEVKN 176
Query: 181 IPEICIRRDG 190
IPEIC+RRDG
Sbjct: 177 IPEICVRRDG 186
>gi|225450667|ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera]
gi|296089740|emb|CBI39559.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/190 (72%), Positives = 155/190 (81%), Gaps = 7/190 (3%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
MSSLA A LRV +TSLV+GVQ++SK WYS+ SFDG + D E ++ +D
Sbjct: 1 MSSLA-NLARFLRV-----RPTTSLVVGVQKNSKAWYSTVSFDGGDGDGKNGEGEESDND 54
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
V EK LQ QGVDPR+GWGFRGVHKAIICGKV PVQKILRNG+TVTIF+VGTGG+FD
Sbjct: 55 LVTEKPNLQLQGVDPRKGWGFRGVHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFD 114
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QRI G KDLPKP QWHRIAVHNE LG+YAV+QLVKNSSVYVEGDIE+RVYNDSINGEVK+
Sbjct: 115 QRI-GGKDLPKPAQWHRIAVHNEPLGAYAVQQLVKNSSVYVEGDIEVRVYNDSINGEVKH 173
Query: 181 IPEICIRRDG 190
+PEICIRRDG
Sbjct: 174 VPEICIRRDG 183
>gi|356535041|ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 217
Score = 258 bits (659), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 129/197 (65%), Positives = 150/197 (76%), Gaps = 11/197 (5%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDE------- 53
M+S+A R A LR+ A +S + GV RS WYS+ G+ND D
Sbjct: 1 MNSMAVRLAKHLRLSALTSFS----LGGVPRSGASWYSTSLSGGENDHPLPDNDAPKKEA 56
Query: 54 VDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSV 113
+D+ FDDF+ EK ELQ QGVDP++GWGFRGVHKAIICGKV PVQKILRNG+ +TIF+V
Sbjct: 57 LDEEFDDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNITIFTV 116
Query: 114 GTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
GTGG+FDQRI G KDLPKP QWHRIAVHN+ILG+YAV+QL KNSSVYVEGDIE RVYNDS
Sbjct: 117 GTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYVEGDIETRVYNDS 176
Query: 174 INGEVKNIPEICIRRDG 190
ING VK+IPEIC+RRDG
Sbjct: 177 INGNVKSIPEICVRRDG 193
>gi|357441825|ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355480238|gb|AES61441.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|388493454|gb|AFK34793.1| unknown [Medicago truncatula]
Length = 212
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 152/197 (77%), Gaps = 16/197 (8%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSS-------GSFDGKNDDQNMDE 53
M+S+A R + LR SSH++ V RS+ + YS+ G N+ N +E
Sbjct: 1 MNSVALRLSKHLR----RSSHAS-----VPRSTVLCYSTFTSETDAGQPSRDNNGLNKEE 51
Query: 54 VDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSV 113
+DD FDDF+ + ELQ QGVDP RGWGFRGVHKAIICGKV PVQKILRNGK VTIF+V
Sbjct: 52 LDDEFDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTV 111
Query: 114 GTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
GTGG++DQRIVGSKDLPKP QWHRIAVHNE+LG+YAV+QL KNSSVYVEG+IE RVYNDS
Sbjct: 112 GTGGMYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDS 171
Query: 174 INGEVKNIPEICIRRDG 190
INGEVK+IPEIC+RRDG
Sbjct: 172 INGEVKSIPEICVRRDG 188
>gi|124359154|gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
Length = 216
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 130/197 (65%), Positives = 152/197 (77%), Gaps = 16/197 (8%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSS-------GSFDGKNDDQNMDE 53
M+S+A R + LR SSH++ V RS+ + YS+ G N+ N +E
Sbjct: 1 MNSVALRLSKHLR----RSSHAS-----VPRSTVLCYSTFTSETDAGQPSRDNNGLNKEE 51
Query: 54 VDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSV 113
+DD FDDF+ + ELQ QGVDP RGWGFRGVHKAIICGKV PVQKILRNGK VTIF+V
Sbjct: 52 LDDEFDDFLGGRPELQLQGVDPSRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTV 111
Query: 114 GTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
GTGG++DQRIVGSKDLPKP QWHRIAVHNE+LG+YAV+QL KNSSVYVEG+IE RVYNDS
Sbjct: 112 GTGGMYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKNSSVYVEGEIETRVYNDS 171
Query: 174 INGEVKNIPEICIRRDG 190
INGEVK+IPEIC+RRDG
Sbjct: 172 INGEVKSIPEICVRRDG 188
>gi|351727395|ref|NP_001237927.1| uncharacterized protein LOC100306124 [Glycine max]
gi|255627623|gb|ACU14156.1| unknown [Glycine max]
Length = 236
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 149/196 (76%), Gaps = 10/196 (5%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSS----GSFDGKNDD--QNMDEV 54
M+S+A R L++ A +SS GV RS WYS+ G + D+ + +
Sbjct: 1 MNSMAVRLVKHLQLSAPTSSSFG----GVPRSGASWYSTSLSGGEYQPSQDNVAPKNEAL 56
Query: 55 DDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVG 114
D DDF+ EK ELQ QGVDP++GWGFRGVHKAIICGKV PVQKILRNG+ +TIF+VG
Sbjct: 57 DGELDDFLGEKAELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKILRNGRNLTIFTVG 116
Query: 115 TGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSI 174
TGG+FDQRI G KDLPKP QWHRIAVHN+ILG+YAV++L KNSSVYVEGDIEIRVYNDSI
Sbjct: 117 TGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGAYAVQKLFKNSSVYVEGDIEIRVYNDSI 176
Query: 175 NGEVKNIPEICIRRDG 190
NGEVK+IPEIC+RRDG
Sbjct: 177 NGEVKSIPEICVRRDG 192
>gi|30681642|ref|NP_192844.2| Single-stranded DNA-binding protein [Arabidopsis thaliana]
gi|38258307|sp|Q84J78.1|SSB_ARATH RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Flags: Precursor
gi|28393531|gb|AAO42186.1| unknown protein [Arabidopsis thaliana]
gi|28827408|gb|AAO50548.1| unknown protein [Arabidopsis thaliana]
gi|34556071|emb|CAE46651.1| single-stranded DNA binding protein [Arabidopsis thaliana]
gi|332657567|gb|AEE82967.1| Single-stranded DNA-binding protein [Arabidopsis thaliana]
Length = 201
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 120/190 (63%), Positives = 149/190 (78%), Gaps = 13/190 (6%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
M+SLA R + +LR SS + L + +R SK W+S+G D + V++ F++
Sbjct: 1 MNSLAIRVSKVLR-----SSSISPLAISAERGSKSWFSTGPID--------EGVEEDFEE 47
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
V E+ ELQP GVDPR+GWGFRGVH+AIICGKV P+QKILRNG+TVTIF+VGTGG+FD
Sbjct: 48 NVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFD 107
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QR+VG+ + PKP QWHRIAVHNE+LGSYAV++L KNSSVYVEGDIE RVYNDSI+ EVK+
Sbjct: 108 QRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKS 167
Query: 181 IPEICIRRDG 190
IPEIC+RRDG
Sbjct: 168 IPEICVRRDG 177
>gi|4850285|emb|CAB43041.1| putative protein [Arabidopsis thaliana]
gi|7267804|emb|CAB81207.1| putative protein [Arabidopsis thaliana]
Length = 254
Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/190 (63%), Positives = 149/190 (78%), Gaps = 13/190 (6%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
M+SLA R + +LR SS + L + +R SK W+S+G D + V++ F++
Sbjct: 1 MNSLAIRVSKVLR-----SSSISPLAISAERGSKSWFSTGPID--------EGVEEDFEE 47
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
V E+ ELQP GVDPR+GWGFRGVH+AIICGKV P+QKILRNG+TVTIF+VGTGG+FD
Sbjct: 48 NVTERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFD 107
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QR+VG+ + PKP QWHRIAVHNE+LGSYAV++L KNSSVYVEGDIE RVYNDSI+ EVK+
Sbjct: 108 QRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKS 167
Query: 181 IPEICIRRDG 190
IPEIC+RRDG
Sbjct: 168 IPEICVRRDG 177
>gi|388505152|gb|AFK40642.1| unknown [Lotus japonicus]
Length = 220
Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 123/197 (62%), Positives = 149/197 (75%), Gaps = 8/197 (4%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQ-------NMDE 53
M+S+A R A LR+ S+ + V + WYS+ +G+ D N +E
Sbjct: 1 MNSIAVRVAKHLRI-TSNVGVAGGGVWRRHGPAASWYSTFLSEGEGDQPSRGNGGLNNEE 59
Query: 54 VDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSV 113
+D+ DDF+ K ELQ QGVDP+RGWGFRGVHKAIICGKV PVQKILRNGK VTIF+V
Sbjct: 60 LDEEIDDFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPVQKILRNGKNVTIFTV 119
Query: 114 GTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
GTGG+ DQRIVG++D+PKP QWHRIAVHN++LG+YAV+Q+ KNSSVYVEGDIE RVYNDS
Sbjct: 120 GTGGMSDQRIVGARDMPKPPQWHRIAVHNDVLGAYAVQQICKNSSVYVEGDIETRVYNDS 179
Query: 174 INGEVKNIPEICIRRDG 190
INGEVK+IPEIC+RRDG
Sbjct: 180 INGEVKSIPEICVRRDG 196
>gi|297813577|ref|XP_002874672.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
gi|297320509|gb|EFH50931.1| mitochondrially targeted single-stranded DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 201
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 118/190 (62%), Positives = 147/190 (77%), Gaps = 13/190 (6%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
M+S+A R + +LR SS + LV+ +R SK W+S+G D +++ + V
Sbjct: 1 MNSIAIRVSKVLR-----SSSISPLVISAERGSKSWFSTGPIDEGVEEEFEEIVS----- 50
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
E+ ELQP GVDPR+GWGFRGVH+AIICGKV P+QKILRNG+TVTIF+VGTGG+FD
Sbjct: 51 ---ERPELQPHGVDPRKGWGFRGVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFD 107
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QR+VG+ + PKP QWHRIAVHNE+LGSYAV++L KNSSVYVEGDIE RVYNDSI+ EVK+
Sbjct: 108 QRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKS 167
Query: 181 IPEICIRRDG 190
IPEIC+RRDG
Sbjct: 168 IPEICVRRDG 177
>gi|218197079|gb|EEC79506.1| hypothetical protein OsI_20574 [Oryza sativa Indica Group]
gi|222632182|gb|EEE64314.1| hypothetical protein OsJ_19151 [Oryza sativa Japonica Group]
Length = 245
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/160 (66%), Positives = 130/160 (81%), Gaps = 4/160 (2%)
Query: 31 RSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIIC 90
R S+ W S+ SF ++ M DD D ++EL+PQ VDP++GWGFRGVH+AIIC
Sbjct: 66 RKSQAWSSTVSFSDIDEKSEMGGDDDYTD----SRRELEPQSVDPKKGWGFRGVHRAIIC 121
Query: 91 GKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAV 150
GKV PVQKILRNG+TVT+F+VGTGG+FDQR+VG DLPKP QWHRIA+HN+ LG++AV
Sbjct: 122 GKVGQVPVQKILRNGRTVTVFTVGTGGMFDQRVVGDADLPKPAQWHRIAIHNDQLGAFAV 181
Query: 151 KQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
++LVKNS+VYVEGDIE RVYNDSIN +VKNIPEIC+RRDG
Sbjct: 182 QKLVKNSAVYVEGDIETRVYNDSINDQVKNIPEICLRRDG 221
>gi|115464809|ref|NP_001056004.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|48475206|gb|AAT44275.1| putative single-strand DNA binding protein [Oryza sativa Japonica
Group]
gi|113579555|dbj|BAF17918.1| Os05g0509700 [Oryza sativa Japonica Group]
gi|215706976|dbj|BAG93436.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 206
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 106/160 (66%), Positives = 130/160 (81%), Gaps = 4/160 (2%)
Query: 31 RSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIIC 90
R S+ W S+ SF ++ M DD D ++EL+PQ VDP++GWGFRGVH+AIIC
Sbjct: 27 RKSQAWSSTVSFSDIDEKSEMGGDDDYTD----SRRELEPQSVDPKKGWGFRGVHRAIIC 82
Query: 91 GKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAV 150
GKV PVQKILRNG+TVT+F+VGTGG+FDQR+VG DLPKP QWHRIA+HN+ LG++AV
Sbjct: 83 GKVGQVPVQKILRNGRTVTVFTVGTGGMFDQRVVGDADLPKPAQWHRIAIHNDQLGAFAV 142
Query: 151 KQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
++LVKNS+VYVEGDIE RVYNDSIN +VKNIPEIC+RRDG
Sbjct: 143 QKLVKNSAVYVEGDIETRVYNDSINDQVKNIPEICLRRDG 182
>gi|326500314|dbj|BAK06246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 142/192 (73%), Gaps = 12/192 (6%)
Query: 1 MSSLAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDD 60
M S+ LR S L R+S+ W S+ SF ++DE DD+ DD
Sbjct: 1 MGSVGTGLLKGLRRVLEQQRKSVDLC----RTSRAWSSTVSF------SDIDEKDDMGDD 50
Query: 61 FVVE--KQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGL 118
++ ++EL+PQ VDP++GWGFRGVH+AIICGKV PVQKILRNG+TVTIF++GTGG+
Sbjct: 51 GDLKDSRRELEPQSVDPKKGWGFRGVHRAIICGKVGQAPVQKILRNGRTVTIFTIGTGGM 110
Query: 119 FDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEV 178
FDQR++GS D PKP QWHRIAVH+E LG+YAV++LVKNS+VY+EGDIE R+YND I+G+V
Sbjct: 111 FDQRVIGSADTPKPAQWHRIAVHSEHLGAYAVQKLVKNSAVYIEGDIETRIYNDGIDGQV 170
Query: 179 KNIPEICIRRDG 190
+NIPEICIR DG
Sbjct: 171 RNIPEICIRGDG 182
>gi|357133060|ref|XP_003568146.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 205
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 130/160 (81%), Gaps = 5/160 (3%)
Query: 31 RSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIIC 90
R S+ W S+ SF +D +M + D ++EL+PQ VDP++GWGFRGVH+AI+C
Sbjct: 27 RKSRAWSSTVSFSDIDDKSDMGDDGDYN-----SRRELEPQTVDPKKGWGFRGVHRAILC 81
Query: 91 GKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAV 150
GKV PVQKILRNG+T+T+F++GTGG+FDQR+V S D+PKP QWHRIAVHNE LG+YAV
Sbjct: 82 GKVGQVPVQKILRNGRTITVFTIGTGGMFDQRVVESADVPKPAQWHRIAVHNEQLGAYAV 141
Query: 151 KQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
++LVKNS+VY+EGDIE RVYNDSIN +VKNIPEICIRRDG
Sbjct: 142 QKLVKNSAVYIEGDIETRVYNDSINDQVKNIPEICIRRDG 181
>gi|413945984|gb|AFW78633.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 223
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/160 (66%), Positives = 130/160 (81%), Gaps = 4/160 (2%)
Query: 31 RSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIIC 90
R S++ S+ SF ++ +M E DD + K+EL+PQGVDP +GW FRGVH+AIIC
Sbjct: 27 RQSRVSSSTVSFSDLDEKGDM-EYDDNSPN---SKRELRPQGVDPNKGWEFRGVHRAIIC 82
Query: 91 GKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAV 150
GKV PVQKILRNG TVT+F+VGTGG+FDQR++G KDLPKP QWHRIAVHN+ L +YAV
Sbjct: 83 GKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPKPAQWHRIAVHNDYLSAYAV 142
Query: 151 KQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
++LVKNS+VYVEGDIE RVYNDS+N +VKNIPEIC+RRDG
Sbjct: 143 QKLVKNSAVYVEGDIETRVYNDSVNDQVKNIPEICVRRDG 182
>gi|238006070|gb|ACR34070.1| unknown [Zea mays]
gi|238006582|gb|ACR34326.1| unknown [Zea mays]
gi|413945982|gb|AFW78631.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
gi|413945983|gb|AFW78632.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 206
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 130/160 (81%), Gaps = 4/160 (2%)
Query: 31 RSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIIC 90
R S++ S+ SF ++ +M+ D+ + K+EL+PQGVDP +GW FRGVH+AIIC
Sbjct: 27 RQSRVSSSTVSFSDLDEKGDMEYDDNSPN----SKRELRPQGVDPNKGWEFRGVHRAIIC 82
Query: 91 GKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAV 150
GKV PVQKILRNG TVT+F+VGTGG+FDQR++G KDLPKP QWHRIAVHN+ L +YAV
Sbjct: 83 GKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPKPAQWHRIAVHNDYLSAYAV 142
Query: 151 KQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
++LVKNS+VYVEGDIE RVYNDS+N +VKNIPEIC+RRDG
Sbjct: 143 QKLVKNSAVYVEGDIETRVYNDSVNDQVKNIPEICVRRDG 182
>gi|116784739|gb|ABK23454.1| unknown [Picea sitchensis]
gi|224286177|gb|ACN40799.1| unknown [Picea sitchensis]
Length = 207
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 134/193 (69%), Gaps = 11/193 (5%)
Query: 4 LAARFANLLRVPASSSSHSTSLVLGVQRSSKMWYSS---GSFDGKNDDQNMDEVDDVFDD 60
+A R NLL H + +LG SS S G + + ++DV +
Sbjct: 1 MAPRLVNLL--------HPLNRMLGRIESSPGLLGSVNPGYCTVGCESNGEEAIEDVKES 52
Query: 61 FVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFD 120
++E QPQGVDP++GWGFRGVHKAIICGKV TPVQKILRNG+TVTIF+VGT G+FD
Sbjct: 53 EQTLRRESQPQGVDPKKGWGFRGVHKAIICGKVGQTPVQKILRNGRTVTIFTVGTAGMFD 112
Query: 121 QRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKN 180
QR G +P+QWHRIAVHNE LG+Y V+QL+K++SVYVEGDIE RVYND+ING VK+
Sbjct: 113 QRTAGMDKSTRPIQWHRIAVHNEPLGAYVVQQLIKDASVYVEGDIETRVYNDNINGTVKH 172
Query: 181 IPEICIRRDGNSY 193
+PEIC+RRDG +
Sbjct: 173 VPEICVRRDGKVH 185
>gi|222628688|gb|EEE60820.1| hypothetical protein OsJ_14429 [Oryza sativa Japonica Group]
Length = 245
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 121/168 (72%), Gaps = 13/168 (7%)
Query: 23 TSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFR 82
T+ L R S+ W S+ SF + D+ + D DDF + P V FR
Sbjct: 67 TAKKLKFYRKSQAWNSTASFS--DVDEKNRKGGDAEDDFTHSR----PDHV-------FR 113
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GVH+AIICGKV PVQKILRNG TVT+F+VGTGG+FDQR VG+++LP P QWHRI+VHN
Sbjct: 114 GVHRAIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRTVGAENLPMPAQWHRISVHN 173
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
E LG++AV++LVKNS+VYVEGDIE RVYND IN +VKNIPEIC+RRDG
Sbjct: 174 EQLGAFAVQKLVKNSAVYVEGDIETRVYNDRINDQVKNIPEICVRRDG 221
>gi|357136675|ref|XP_003569929.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 151
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 106/132 (80%), Gaps = 11/132 (8%)
Query: 59 DDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGL 118
DDF K+E++ FRGVH+AIICG V PVQKILRNG TVT+F+VGTGG+
Sbjct: 7 DDFAGSKREVE-----------FRGVHRAIICGNVGQVPVQKILRNGHTVTVFTVGTGGM 55
Query: 119 FDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEV 178
FDQR VG+++LP P QWHRIAVHNE LG+YAV++LVKN++VYVEGDIE RVYND IN ++
Sbjct: 56 FDQRRVGAENLPVPAQWHRIAVHNEHLGTYAVQKLVKNAAVYVEGDIETRVYNDRINNQL 115
Query: 179 KNIPEICIRRDG 190
KNIPEIC+RRDG
Sbjct: 116 KNIPEICVRRDG 127
>gi|194694908|gb|ACF81538.1| unknown [Zea mays]
gi|413945980|gb|AFW78629.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
gi|413945981|gb|AFW78630.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 189
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 114/160 (71%), Gaps = 21/160 (13%)
Query: 31 RSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIIC 90
R S++ S+ SF ++ +M+ D+ + K+EL+PQGVDP +GW FRGVH+AIIC
Sbjct: 27 RQSRVSSSTVSFSDLDEKGDMEYDDNSPN----SKRELRPQGVDPNKGWEFRGVHRAIIC 82
Query: 91 GKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAV 150
GKV PVQKILRNG TVT+F+VGTGG+FDQR++G KDLPKP QWHRIAVHN+ L +YAV
Sbjct: 83 GKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPKPAQWHRIAVHNDYLSAYAV 142
Query: 151 KQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
++LVKN +N +VKNIPEIC+RRDG
Sbjct: 143 QKLVKN-----------------VNDQVKNIPEICVRRDG 165
>gi|115457904|ref|NP_001052552.1| Os04g0363700 [Oryza sativa Japonica Group]
gi|113564123|dbj|BAF14466.1| Os04g0363700, partial [Oryza sativa Japonica Group]
Length = 111
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 93/104 (89%)
Query: 87 AIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILG 146
AIICGKV PVQKILRNG TVT+F+VGTGG+FDQR VG+++LP P QWHRI+VHNE LG
Sbjct: 1 AIICGKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRTVGAENLPMPAQWHRISVHNEQLG 60
Query: 147 SYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
++AV++LVKNS+VYVEGDIE RVYND IN +VKNIPEIC+RRDG
Sbjct: 61 AFAVQKLVKNSAVYVEGDIETRVYNDRINDQVKNIPEICVRRDG 104
>gi|238006822|gb|ACR34446.1| unknown [Zea mays]
gi|413945979|gb|AFW78628.1| hypothetical protein ZEAMMB73_663564 [Zea mays]
Length = 151
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 98/129 (75%), Gaps = 4/129 (3%)
Query: 31 RSSKMWYSSGSFDGKNDDQNMDEVDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIIC 90
R S++ S+ SF ++ +M+ D+ + K+EL+PQGVDP +GW FRGVH+AIIC
Sbjct: 27 RQSRVSSSTVSFSDLDEKGDMEYDDNSPN----SKRELRPQGVDPNKGWEFRGVHRAIIC 82
Query: 91 GKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAV 150
GKV PVQKILRNG TVT+F+VGTGG+FDQR++G KDLPKP QWHRIAVHN+ L +YAV
Sbjct: 83 GKVGQVPVQKILRNGHTVTVFTVGTGGMFDQRVIGPKDLPKPAQWHRIAVHNDYLSAYAV 142
Query: 151 KQLVKNSSV 159
++LVK V
Sbjct: 143 QKLVKKYVV 151
>gi|3600051|gb|AAC35538.1| contains similarity to the single-strand binding proteins family
(Pfam: SSB.hmm, score: 24.02) [Arabidopsis thaliana]
Length = 150
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 67/73 (91%)
Query: 118 LFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
+FDQR+VG+ + PKP QWHRIAVHNE+LGSYAV++L KNSSVYVEGDIE RVYNDSI+ E
Sbjct: 1 MFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSE 60
Query: 178 VKNIPEICIRRDG 190
VK+IPEIC+RRDG
Sbjct: 61 VKSIPEICVRRDG 73
>gi|227206178|dbj|BAH57144.1| AT4G11060 [Arabidopsis thaliana]
Length = 97
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 67/73 (91%)
Query: 118 LFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
+FDQR+VG+ + PKP QWHRIAVHNE+LGSYAV++L KNSSVYVEGDIE RVYNDSI+ E
Sbjct: 1 MFDQRLVGATNQPKPAQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSE 60
Query: 178 VKNIPEICIRRDG 190
VK+IPEIC+RRDG
Sbjct: 61 VKSIPEICVRRDG 73
>gi|255541852|ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
gi|223549170|gb|EEF50659.1| Single-stranded DNA-binding protein, mitochondrial precursor,
putative [Ricinus communis]
Length = 223
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 79/114 (69%), Gaps = 6/114 (5%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK------PVQWH 136
GV+KAI+ G+V +P+QK LR+GK+VT+FS+GTGG+ + R + P+ VQWH
Sbjct: 85 GVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTGGIRNNRRPMQNEEPREYANRCAVQWH 144
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
R++V+ E LGS +K L+ S +Y+EG++E +V+ D I G V+ I E+ IR+DG
Sbjct: 145 RVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVFTDPITGLVRRIREVAIRQDG 198
>gi|115438823|ref|NP_001043691.1| Os01g0642900 [Oryza sativa Japonica Group]
gi|55297106|dbj|BAD68750.1| single-strand DNA binding protein-like [Oryza sativa Japonica
Group]
gi|113533222|dbj|BAF05605.1| Os01g0642900 [Oryza sativa Japonica Group]
gi|125571356|gb|EAZ12871.1| hypothetical protein OsJ_02792 [Oryza sativa Japonica Group]
gi|215686631|dbj|BAG88884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707058|dbj|BAG93518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 224
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 81/129 (62%), Gaps = 13/129 (10%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP G++KAI+ GKV P+QK LR+G+TV +FS+GTGG+ + R ++ P
Sbjct: 84 GLDP-------GIYKAIMVGKVGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRPLDREEPH 136
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
VQWHR+ ++ E LGS A+K + S +Y+EG++E +V++D I G V+ I EI
Sbjct: 137 QYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIA 196
Query: 186 IRRDGNSYY 194
+R +G +
Sbjct: 197 VRSNGRLLF 205
>gi|168046407|ref|XP_001775665.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672938|gb|EDQ59468.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 72/110 (65%), Gaps = 6/110 (5%)
Query: 87 AIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP------VQWHRIAV 140
AI+ GKV P QK+L++G+ VTIFSVGTGG+ R + + P+ +QWHRIAV
Sbjct: 1 AILLGKVGQAPAQKVLKSGRAVTIFSVGTGGMHLNRKMLDGETPEEFAERSSIQWHRIAV 60
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ E +G ++ + + S VYVEG+IE R+YND +VK I EI +R++G
Sbjct: 61 YQERIGQLILRSMKQGSQVYVEGNIETRIYNDPNTQQVKRIREIAVRQNG 110
>gi|116788306|gb|ABK24831.1| unknown [Picea sitchensis]
Length = 223
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 77/114 (67%), Gaps = 6/114 (5%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP------VQWH 136
G+++AI+ G+V PVQK LR+G+ +T+FSVGTGG+ + R + P+ VQWH
Sbjct: 85 GIYRAILLGEVGQLPVQKRLRSGRVITMFSVGTGGMHNNRRPLEDESPREYADRSMVQWH 144
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
R++++ + LG A++ L + + VY+EG++E ++++D I G VK + EI IRR G
Sbjct: 145 RVSIYADNLGGIAMQHLKQGAHVYLEGNLETKIFSDPITGLVKRVREIAIRRQG 198
>gi|125527031|gb|EAY75145.1| hypothetical protein OsI_03039 [Oryza sativa Indica Group]
Length = 224
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 81/129 (62%), Gaps = 13/129 (10%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP G++KAI+ GK+ P+QK LR+G+TV +FS+GTGG+ + R ++ P
Sbjct: 84 GLDP-------GIYKAIMVGKLGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRPLDREEPH 136
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
VQWHR+ ++ E LGS A+K + S +Y+EG++E +V++D I G V+ I EI
Sbjct: 137 QYAERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIA 196
Query: 186 IRRDGNSYY 194
+R +G +
Sbjct: 197 VRSNGRLLF 205
>gi|225427470|ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Vitis vinifera]
gi|296088446|emb|CBI37437.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 75/114 (65%), Gaps = 6/114 (5%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK------PVQWH 136
G++KAI+ GK TP+QK LR+G+ VT+FSVGTGG+ + R + PK VQWH
Sbjct: 83 GIYKAILVGKAGQTPLQKRLRSGRMVTLFSVGTGGIRNNRRPLDNEDPKEYANRSAVQWH 142
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
R+ V+ E LG+ +K + S +Y+EG++E +++ D + G V+ I E+ IRR+G
Sbjct: 143 RVTVYPENLGNIVMKHVSPGSVLYLEGNLETKIFTDPVTGLVRRIREVAIRRNG 196
>gi|242058153|ref|XP_002458222.1| hypothetical protein SORBIDRAFT_03g029310 [Sorghum bicolor]
gi|241930197|gb|EES03342.1| hypothetical protein SORBIDRAFT_03g029310 [Sorghum bicolor]
Length = 221
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 13/129 (10%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP G++KAI+ GKV P+QK LRNG+TV +FS+GTGG+ + R ++ P
Sbjct: 81 GLDP-------GIYKAILVGKVGQEPMQKRLRNGRTVVLFSLGTGGIRNNRRPLDREEPH 133
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
VQWHR+ V+ E LG+ A+K + + +Y+EG++E +V+ D I G V+ I EI
Sbjct: 134 QYADRCSVQWHRVCVYPERLGTLALKNVKTGTVLYLEGNLETKVFCDPITGLVRRIREIA 193
Query: 186 IRRDGNSYY 194
+R G +
Sbjct: 194 VRSTGRLLF 202
>gi|168004403|ref|XP_001754901.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694005|gb|EDQ80355.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 126
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 74/111 (66%), Gaps = 6/111 (5%)
Query: 86 KAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP------VQWHRIA 139
+AI+ G+V P QKIL++G+ VT+FSVGTGG+ R + + P+ +QWHR+A
Sbjct: 1 QAILLGEVGQAPAQKILKSGRAVTVFSVGTGGMHLNRRMFDGETPEEFAERSNMQWHRVA 60
Query: 140 VHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
V+ E +G+ ++ + + + VYVEG++E RVY D + +VK I EI +R++G
Sbjct: 61 VYQEKVGNLILRSMKQGAQVYVEGNMETRVYTDPVTQQVKRIREIAVRQNG 111
>gi|224118858|ref|XP_002317924.1| predicted protein [Populus trichocarpa]
gi|222858597|gb|EEE96144.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK------PVQWH 136
GV+KAI+ G+V P+QK LR+G+ +TIFS+GTGG+ + R + P+ VQWH
Sbjct: 82 GVYKAILVGQVGQNPLQKKLRSGREITIFSMGTGGIRNNRRPLQNEDPREYANRCAVQWH 141
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
R++V+ E LG ++ ++ S +YVEG++E +V+ D I G V+ I EI +R++G
Sbjct: 142 RVSVYPERLGRVVMQNVLPGSILYVEGNLETKVFTDPITGLVRRIREIAVRQNG 195
>gi|357135683|ref|XP_003569438.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Brachypodium distachyon]
Length = 214
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 79/129 (61%), Gaps = 13/129 (10%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLP- 130
G+DP G++KAI+ GKV P+QK LR+GKTV +FS+GTGG+ + R + P
Sbjct: 74 GLDP-------GIYKAIMVGKVGQEPMQKRLRSGKTVVLFSLGTGGIRNNRRPLDNEEPH 126
Query: 131 -----KPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
VQWHR+ V+ E LGS +K + + +Y+EG++E +V++D I G V+ I EI
Sbjct: 127 QYADRSSVQWHRVCVYPERLGSLTLKNVKIGTVLYLEGNLETKVFSDPITGLVRRIREIA 186
Query: 186 IRRDGNSYY 194
+R +G +
Sbjct: 187 VRANGRLLF 195
>gi|168022770|ref|XP_001763912.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684917|gb|EDQ71316.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 75/112 (66%), Gaps = 6/112 (5%)
Query: 87 AIICGKVKDTPVQKILRNGKTVTIFSVGTGGL-FDQRIVGSKDLPK-----PVQWHRIAV 140
AI+ G+V P QK+L++G+ VTIFSVGTGG+ ++R+ + L + +QWHR+AV
Sbjct: 1 AILLGEVGQAPSQKVLKSGRAVTIFSVGTGGMHLNRRMFDGETLEEFAERSNMQWHRVAV 60
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGNS 192
+ E +G ++ + + S VYVEG+IE R+YND +VK I EI +R++G S
Sbjct: 61 YQEHIGHLILRSMKQGSQVYVEGNIETRIYNDPNTQKVKRIREIAVRQNGTS 112
>gi|449439377|ref|XP_004137462.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
gi|449486863|ref|XP_004157425.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Cucumis sativus]
Length = 234
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 77/114 (67%), Gaps = 6/114 (5%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK------PVQWH 136
G++KAI+ GKV +P+QK L++G+TVT+ SVGTGG+ + R + + P+ VQWH
Sbjct: 95 GIYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWH 154
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
R++++ LG+ +K +V S +Y+EG++E +++ D + G V+ I E+ IR +G
Sbjct: 155 RVSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRGNG 208
>gi|297834764|ref|XP_002885264.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297331104|gb|EFH61523.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK------PVQWH 136
G+ KAI+ G+V P+QK L++G+TVT+FSVGTGG+ + R + P+ VQWH
Sbjct: 85 GIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWH 144
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
R++V+ E L +K + + +Y+EG++E +++ D + G V+ I E+ IRR+G
Sbjct: 145 RVSVYPERLAELVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNG 198
>gi|194701226|gb|ACF84697.1| unknown [Zea mays]
gi|195612674|gb|ACG28167.1| single-stranded DNA-binding protein [Zea mays]
gi|414881237|tpg|DAA58368.1| TPA: single-stranded DNA-binding protein [Zea mays]
Length = 224
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 13/129 (10%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP G++KAI+ GKV P+QK LR+GKTV +FS+GTGG+ + R ++ P
Sbjct: 84 GLDP-------GIYKAILVGKVGQEPMQKRLRSGKTVVLFSLGTGGIRNNRRPLDREEPH 136
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
VQWHR+ V+ + LG+ A+ + + +Y+EG++E +V+ D I G V+ I EI
Sbjct: 137 QYADRCSVQWHRVCVYPDRLGTVALNNVKTGTILYLEGNLETKVFCDPITGLVRRIREIA 196
Query: 186 IRRDGNSYY 194
+R G +
Sbjct: 197 VRSSGRLLF 205
>gi|356511595|ref|XP_003524509.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Glycine max]
Length = 207
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 27/197 (13%)
Query: 1 MSSLAAR-FANLLRVPASSSSHSTSLVLGVQRSSKMWYSSGSFDGKNDDQNMDEVDDVFD 59
M +L+ R + +LLR P + ST + S D D D V + +
Sbjct: 5 MMTLSRRLYCSLLRTPNAYRHFSTD----------HLFDSDEADSAPDPPAPDAVQEE-E 53
Query: 60 DFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF 119
FV+++ G+D G+++AI+ GK P+QK L++G +VT+ SVGTGG+
Sbjct: 54 KFVIDRP--LENGLD-------VGIYRAILVGKAGQAPLQKKLKSGTSVTLLSVGTGGIH 104
Query: 120 DQRIVGSKDLPK------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
+ R + PK +QWHR++V+ + LG K +V S +YVEG++E + + D
Sbjct: 105 NNRRPRVDENPKDYANRSAIQWHRVSVYPQKLGDLVTKHVVPGSMLYVEGNLETKCFTDP 164
Query: 174 INGEVKNIPEICIRRDG 190
I G + I EI +RR+G
Sbjct: 165 ITGIARRIREIAVRRNG 181
>gi|15229675|ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis thaliana]
gi|9294319|dbj|BAB02216.1| unnamed protein product [Arabidopsis thaliana]
gi|332642598|gb|AEE76119.1| single-strand DNA-binding protein [Arabidopsis thaliana]
Length = 217
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK------PVQWH 136
G+ KAI+ G+V P+QK L++G+TVT+FSVGTGG+ + R + P+ VQWH
Sbjct: 79 GIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWH 138
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
R++V+ E L +K + + +Y+EG++E +++ D + G V+ I E+ IRR+G
Sbjct: 139 RVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLVRRIREVAIRRNG 192
>gi|226496599|ref|NP_001151839.1| single-stranded DNA-binding protein [Zea mays]
gi|195650155|gb|ACG44545.1| single-stranded DNA-binding protein [Zea mays]
Length = 224
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 78/129 (60%), Gaps = 13/129 (10%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP G++KAI+ GKV P+QK LR+GKTV +FS+GTGG+ + R ++ P
Sbjct: 84 GLDP-------GIYKAILVGKVGQEPMQKRLRSGKTVVLFSLGTGGIRNNRRPLDREEPH 136
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
VQWHR+ V+ + LG+ A+ + + +Y+EG++E +V+ D I G V+ I EI
Sbjct: 137 QYADRCSVQWHRVCVYPDRLGTVALNNVKTGTILYLEGNLETKVFCDPITGLVRRIREIA 196
Query: 186 IRRDGNSYY 194
+R G +
Sbjct: 197 VRSSGRLLF 205
>gi|147819885|emb|CAN67299.1| hypothetical protein VITISV_002040 [Vitis vinifera]
Length = 122
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 72/112 (64%), Gaps = 8/112 (7%)
Query: 87 AIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK------PVQWHRIAV 140
AI+ GK TP+QK LR+G+ VT+FSVGTGG+ + R + PK VQWHR+ V
Sbjct: 2 AILVGKAGQTPLQKRLRSGRMVTLFSVGTGGIRNNRRPLDNEDPKEYANRSAVQWHRVTV 61
Query: 141 HNEILGSYAVKQLVK--NSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ E LG+ +K + +S +Y+EG++E +++ D + G V+ I E+ IRR+G
Sbjct: 62 YPENLGNIVMKHVSPGLSSVLYLEGNLETKIFTDPVTGLVRRIREVAIRRNG 113
>gi|357477659|ref|XP_003609115.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355510170|gb|AES91312.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 253
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 13/111 (11%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP GV++AI+ GK P+QK L++G VT+ S+GTGG+ + R + P+
Sbjct: 96 GLDP-------GVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIRNNRRPLDHENPR 148
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSING 176
VQWHR+ V+ E LG+ +K ++ S++YVEG++E +V++D + G
Sbjct: 149 EYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTG 199
>gi|388519493|gb|AFK47808.1| unknown [Medicago truncatula]
Length = 239
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 13/111 (11%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP GV++AI+ GK P+QK L++G VT+ S+GTGG+ + R + P+
Sbjct: 96 GLDP-------GVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIRNNRRPLDHENPR 148
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSING 176
VQWHR+ V+ E LG+ +K ++ S++YVEG++E +V++D + G
Sbjct: 149 EYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTG 199
>gi|357477593|ref|XP_003609082.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355510137|gb|AES91279.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 239
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 13/111 (11%)
Query: 72 GVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPK 131
G+DP GV++AI+ GK P+QK L++G VT+ S+GTGG+ + R + P+
Sbjct: 96 GLDP-------GVYRAILVGKAGQKPLQKKLKSGTVVTLLSIGTGGIRNNRRPLDHENPR 148
Query: 132 ------PVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSING 176
VQWHR+ V+ E LG+ +K ++ S++YVEG++E +V++D + G
Sbjct: 149 EYANRCAVQWHRVTVYPERLGNLLMKTVLPGSTLYVEGNLETKVFSDPVTG 199
>gi|302821151|ref|XP_002992240.1| hypothetical protein SELMODRAFT_448693 [Selaginella moellendorffii]
gi|300140007|gb|EFJ06737.1| hypothetical protein SELMODRAFT_448693 [Selaginella moellendorffii]
Length = 210
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 15/121 (12%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP---------- 132
G++KAI+ G V PV+++ +V IFS+GTGGL + R K L
Sbjct: 92 GIYKAILVGSVGQKPVERVFATNVSVVIFSLGTGGLRNNR----KQLEGEHWETYAERSF 147
Query: 133 VQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGNS 192
QWHR+ V L A ++L K ++VY+EG IE RVY+D++ G +K + EIC+R+ G
Sbjct: 148 TQWHRVCVFKLGLLDMA-RKLTKGNNVYLEGSIETRVYSDAVTGALKRVREICVRQCGRL 206
Query: 193 Y 193
Y
Sbjct: 207 Y 207
>gi|302769376|ref|XP_002968107.1| hypothetical protein SELMODRAFT_440287 [Selaginella moellendorffii]
gi|300163751|gb|EFJ30361.1| hypothetical protein SELMODRAFT_440287 [Selaginella moellendorffii]
Length = 192
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 77 RGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPV-QW 135
R F+GV+KA+I G++ P + +L+NG + V TGGL Q K L P Q
Sbjct: 59 RAPAFQGVYKAVIVGELTQPPAELVLKNGNAIVTLMVATGGLRVQ-----KKLNAPTKQI 113
Query: 136 HRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGNSYY 194
H++ V++ L A Q+ K +Y+EG++E RV+ND + G VK EI +R++G +
Sbjct: 114 HKVVVYHRRLKDLAT-QIKKGQQIYLEGNMESRVFNDPVTGAVKLSREISVRQNGRLFM 171
>gi|302773852|ref|XP_002970343.1| hypothetical protein SELMODRAFT_411277 [Selaginella moellendorffii]
gi|300161859|gb|EFJ28473.1| hypothetical protein SELMODRAFT_411277 [Selaginella moellendorffii]
Length = 192
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 77 RGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPV-QW 135
R F+GV+KA+I G++ P + +L+NG + V TGGL Q K L P Q
Sbjct: 59 RAPAFQGVYKAVIVGELTQPPAELVLKNGNAIVTLMVATGGLRVQ-----KKLNAPTKQI 113
Query: 136 HRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGNSYY 194
H++ V++ L A Q+ K +Y+EG++E RV+ND + G VK EI +R++G +
Sbjct: 114 HKVVVYHRRLKDLAT-QIKKGQQIYLEGNMESRVFNDPVTGAVKLSREISVRQNGRLFM 171
>gi|302800912|ref|XP_002982213.1| hypothetical protein SELMODRAFT_115961 [Selaginella moellendorffii]
gi|300150229|gb|EFJ16881.1| hypothetical protein SELMODRAFT_115961 [Selaginella moellendorffii]
Length = 122
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 15/115 (13%)
Query: 87 AIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP----------VQWH 136
AI+ G V PV+++ +V IFS+GTGGL + R K L QWH
Sbjct: 1 AILVGSVGQKPVERVFATNVSVVIFSLGTGGLRNNR----KQLEGEHWETYAERSFTQWH 56
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
R+ V L A ++L K ++VY+EG IE RVY+D++ G +K + EIC+R+ G
Sbjct: 57 RVCVFKLGLLDMA-RKLTKGTNVYLEGSIETRVYSDAVTGALKRVREICVRQCGE 110
>gi|262377229|ref|ZP_06070454.1| RecBCD nuclease ssDNA-binding protein [Acinetobacter lwoffii SH145]
gi|262307967|gb|EEY89105.1| RecBCD nuclease ssDNA-binding protein [Acinetobacter lwoffii SH145]
Length = 195
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGKDPETKTFANGGSLTQFSIATSDSWTDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|50086413|ref|YP_047923.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ADP1]
gi|49532389|emb|CAG70101.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ADP1]
Length = 192
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|424057701|ref|ZP_17795218.1| single-strand binding protein [Acinetobacter nosocomialis Ab22222]
gi|445438607|ref|ZP_21441430.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC021]
gi|407440217|gb|EKF46735.1| single-strand binding protein [Acinetobacter nosocomialis Ab22222]
gi|444752938|gb|ELW77608.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC021]
Length = 194
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|262380491|ref|ZP_06073645.1| single-strand binding protein [Acinetobacter radioresistens SH164]
gi|262297937|gb|EEY85852.1| single-strand binding protein [Acinetobacter radioresistens SH164]
Length = 194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|421466523|ref|ZP_15915202.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
WC-A-157]
gi|400203303|gb|EJO34296.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
WC-A-157]
Length = 194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|406040952|ref|ZP_11048307.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 187
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNTGER--KEQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|421693730|ref|ZP_16133363.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-692]
gi|404570367|gb|EKA75444.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-692]
Length = 193
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|255320294|ref|ZP_05361479.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
SK82]
gi|421856229|ref|ZP_16288597.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|255302733|gb|EET81965.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
SK82]
gi|403188333|dbj|GAB74798.1| single-stranded DNA-binding protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|445490032|ref|ZP_21459040.1| single-stranded DNA-binding protein [Acinetobacter baumannii
AA-014]
gi|444766474|gb|ELW90749.1| single-stranded DNA-binding protein [Acinetobacter baumannii
AA-014]
Length = 193
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|260550237|ref|ZP_05824450.1| single-stranded DNA-binding protein [Acinetobacter sp. RUH2624]
gi|260406765|gb|EEX00245.1| single-stranded DNA-binding protein [Acinetobacter sp. RUH2624]
Length = 194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|262370908|ref|ZP_06064232.1| single-stranded DNA-binding protein [Acinetobacter johnsonii SH046]
gi|262314270|gb|EEY95313.1| single-stranded DNA-binding protein [Acinetobacter johnsonii SH046]
Length = 194
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|417554211|ref|ZP_12205280.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-81]
gi|417560324|ref|ZP_12211203.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|421199594|ref|ZP_15656755.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|421455651|ref|ZP_15904995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-123]
gi|421635190|ref|ZP_16075793.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-13]
gi|421803782|ref|ZP_16239694.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-694]
gi|395522906|gb|EJG10995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|395564591|gb|EJG26242.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|400211889|gb|EJO42851.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-123]
gi|400390628|gb|EJP57675.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-81]
gi|408702742|gb|EKL48150.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-13]
gi|410412248|gb|EKP64107.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-694]
Length = 193
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|169634709|ref|YP_001708445.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii SDF]
gi|169153501|emb|CAP02660.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii]
Length = 193
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|169794398|ref|YP_001712191.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AYE]
gi|213159026|ref|YP_002321024.1| single-strand binding protein [Acinetobacter baumannii AB0057]
gi|215481953|ref|YP_002324135.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
AB307-0294]
gi|239503874|ref|ZP_04663184.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB900]
gi|260557951|ref|ZP_05830164.1| single-stranded DNA-binding protein [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|301345189|ref|ZP_07225930.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB056]
gi|301510680|ref|ZP_07235917.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB058]
gi|301595812|ref|ZP_07240820.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AB059]
gi|332854789|ref|ZP_08435552.1| single-strand binding family protein [Acinetobacter baumannii
6013150]
gi|332868901|ref|ZP_08438478.1| single-strand binding family protein [Acinetobacter baumannii
6013113]
gi|403673311|ref|ZP_10935612.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter sp. NCTC
10304]
gi|417550359|ref|ZP_12201438.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-18]
gi|417563883|ref|ZP_12214757.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC143]
gi|417574592|ref|ZP_12225446.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC-5]
gi|421620973|ref|ZP_16061901.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|421624177|ref|ZP_16065050.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC098]
gi|421641981|ref|ZP_16082512.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|421647693|ref|ZP_16088104.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|421650392|ref|ZP_16090769.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC0162]
gi|421654745|ref|ZP_16095072.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-72]
gi|421659878|ref|ZP_16100094.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-83]
gi|421663123|ref|ZP_16103277.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC110]
gi|421673663|ref|ZP_16113600.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|421680136|ref|ZP_16119995.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC111]
gi|421690350|ref|ZP_16130021.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-116]
gi|421698353|ref|ZP_16137895.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|421789871|ref|ZP_16226115.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|421797130|ref|ZP_16233178.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-21]
gi|421800179|ref|ZP_16236158.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC1]
gi|421807215|ref|ZP_16243076.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC035]
gi|424058346|ref|ZP_17795843.1| single-strand binding protein [Acinetobacter baumannii Ab33333]
gi|445410638|ref|ZP_21432954.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-57]
gi|169147325|emb|CAM85186.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii AYE]
gi|193078632|gb|ABO13676.2| RecBCD nuclease ssDNA-binding protein [Acinetobacter baumannii ATCC
17978]
gi|213058186|gb|ACJ43088.1| single-strand binding protein [Acinetobacter baumannii AB0057]
gi|213986980|gb|ACJ57279.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
AB307-0294]
gi|260408742|gb|EEX02047.1| single-stranded DNA-binding protein [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|332727791|gb|EGJ59195.1| single-strand binding family protein [Acinetobacter baumannii
6013150]
gi|332733049|gb|EGJ64250.1| single-strand binding family protein [Acinetobacter baumannii
6013113]
gi|395555639|gb|EJG21640.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC143]
gi|400210160|gb|EJO41130.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC-5]
gi|400386184|gb|EJP49258.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-18]
gi|404564622|gb|EKA69801.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-116]
gi|404572653|gb|EKA77695.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|404665588|gb|EKB33550.1| single-strand binding protein [Acinetobacter baumannii Ab33333]
gi|408510516|gb|EKK12178.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-72]
gi|408510910|gb|EKK12569.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC0162]
gi|408514733|gb|EKK16339.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|408515887|gb|EKK17466.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|408699833|gb|EKL45308.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|408701745|gb|EKL47167.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC098]
gi|408707211|gb|EKL52505.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-83]
gi|408714151|gb|EKL59306.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC110]
gi|410385881|gb|EKP38365.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|410390118|gb|EKP42520.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC111]
gi|410396996|gb|EKP49250.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|410397625|gb|EKP49871.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-21]
gi|410408387|gb|EKP60355.1| single-stranded DNA-binding protein [Acinetobacter baumannii Canada
BC1]
gi|410416857|gb|EKP68628.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC035]
gi|444779811|gb|ELX03784.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-57]
gi|452952924|gb|EME58348.1| Single-stranded DNA-binding protein (SSB) [Acinetobacter baumannii
MSP4-16]
Length = 193
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|299768442|ref|YP_003730468.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter oleivorans DR1]
gi|298698530|gb|ADI89095.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter oleivorans DR1]
Length = 196
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|184159800|ref|YP_001848139.1| single-stranded DNA-binding protein [Acinetobacter baumannii ACICU]
gi|384133493|ref|YP_005516105.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii 1656-2]
gi|417880318|ref|ZP_12524849.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH3]
gi|445470673|ref|ZP_21451605.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC338]
gi|183211394|gb|ACC58792.1| Single-stranded DNA-binding protein [Acinetobacter baumannii ACICU]
gi|322509713|gb|ADX05167.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii 1656-2]
gi|342225402|gb|EGT90400.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH3]
gi|444772627|gb|ELW96742.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC338]
Length = 193
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|332872795|ref|ZP_08440760.1| single-strand binding family protein [Acinetobacter baumannii
6014059]
gi|384144919|ref|YP_005527629.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii MDR-ZJ06]
gi|385239226|ref|YP_005800565.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TCDC-AB0715]
gi|387122283|ref|YP_006288165.1| single stranded DNA-binding protein [Acinetobacter baumannii
MDR-TJ]
gi|407930705|ref|YP_006846348.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TYTH-1]
gi|416149871|ref|ZP_11603115.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
gi|417544522|ref|ZP_12195608.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC032]
gi|417571273|ref|ZP_12222130.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC189]
gi|417576259|ref|ZP_12227104.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-17]
gi|417870832|ref|ZP_12515782.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH1]
gi|417875321|ref|ZP_12520139.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH2]
gi|417882231|ref|ZP_12526537.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH4]
gi|421203820|ref|ZP_15660954.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC12]
gi|421533929|ref|ZP_15980208.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC30]
gi|421627793|ref|ZP_16068590.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC180]
gi|421668251|ref|ZP_16108291.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|421670133|ref|ZP_16110142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC099]
gi|421688701|ref|ZP_16128399.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-143]
gi|421705064|ref|ZP_16144505.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1122]
gi|421708843|ref|ZP_16148216.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1219]
gi|421790665|ref|ZP_16226864.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-2]
gi|424050657|ref|ZP_17788193.1| single-strand binding protein [Acinetobacter baumannii Ab11111]
gi|424061825|ref|ZP_17799312.1| single-strand binding protein [Acinetobacter baumannii Ab44444]
gi|425753997|ref|ZP_18871864.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-113]
gi|445484692|ref|ZP_21456727.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-78]
gi|323519727|gb|ADX94108.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TCDC-AB0715]
gi|332738956|gb|EGJ69818.1| single-strand binding family protein [Acinetobacter baumannii
6014059]
gi|333364240|gb|EGK46254.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
gi|342226105|gb|EGT91080.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH2]
gi|342226899|gb|EGT91852.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH1]
gi|342238155|gb|EGU02591.1| single-stranded DNA-binding protein [Acinetobacter baumannii
ABNIH4]
gi|347595412|gb|AEP08133.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii MDR-ZJ06]
gi|385876775|gb|AFI93870.1| single stranded DNA-binding protein [Acinetobacter baumannii
MDR-TJ]
gi|395551721|gb|EJG17730.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC189]
gi|395569480|gb|EJG30142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-17]
gi|398326659|gb|EJN42803.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC12]
gi|400382410|gb|EJP41088.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC032]
gi|404560458|gb|EKA65701.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-143]
gi|404669410|gb|EKB37303.1| single-strand binding protein [Acinetobacter baumannii Ab11111]
gi|404675552|gb|EKB43251.1| single-strand binding protein [Acinetobacter baumannii Ab44444]
gi|407189157|gb|EKE60385.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1122]
gi|407189571|gb|EKE60797.1| single stranded DNA-binding protein [Acinetobacter baumannii
ZWS1219]
gi|407899286|gb|AFU36117.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter baumannii TYTH-1]
gi|408709679|gb|EKL54920.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC180]
gi|409988178|gb|EKO44352.1| single-stranded DNA-binding protein [Acinetobacter baumannii AC30]
gi|410380689|gb|EKP33269.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|410386691|gb|EKP39159.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC099]
gi|410405290|gb|EKP57331.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-2]
gi|425497390|gb|EKU63496.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-113]
gi|444767691|gb|ELW91937.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-78]
Length = 193
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|427426403|ref|ZP_18916461.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-136]
gi|425696864|gb|EKU66562.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-136]
Length = 195
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|293610618|ref|ZP_06692918.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375136369|ref|YP_004997019.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter calcoaceticus PHEA-2]
gi|292826962|gb|EFF85327.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123814|gb|ADY83337.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter calcoaceticus PHEA-2]
Length = 195
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|445461634|ref|ZP_21448893.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC047]
gi|444771358|gb|ELW95489.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC047]
Length = 193
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|359430093|ref|ZP_09221107.1| single-stranded DNA-binding protein [Acinetobacter sp. NBRC 100985]
gi|358234491|dbj|GAB02646.1| single-stranded DNA-binding protein [Acinetobacter sp. NBRC 100985]
Length = 192
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEI 100
>gi|262280445|ref|ZP_06058229.1| single-stranded DNA-binding protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258223|gb|EEY76957.1| single-stranded DNA-binding protein [Acinetobacter calcoaceticus
RUH2202]
Length = 197
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|358012036|ref|ZP_09143846.1| single-stranded DNA-binding protein [Acinetobacter sp. P8-3-8]
Length = 197
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|403051081|ref|ZP_10905565.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter bereziniae LMG 1003]
gi|445419723|ref|ZP_21435367.1| single-stranded DNA-binding protein [Acinetobacter sp. WC-743]
gi|444759539|gb|ELW84006.1| single-stranded DNA-binding protein [Acinetobacter sp. WC-743]
Length = 194
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKNSGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|226953624|ref|ZP_03824088.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ATCC 27244]
gi|294651864|ref|ZP_06729155.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter haemolyticus ATCC 19194]
gi|226835627|gb|EEH68010.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. ATCC 27244]
gi|292822253|gb|EFF81165.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter haemolyticus ATCC 19194]
Length = 193
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGER--KEQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEI 100
>gi|402759012|ref|ZP_10861268.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter sp. NCTC 7422]
Length = 198
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWMDKSTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEI 100
>gi|262373715|ref|ZP_06066993.1| single-stranded DNA-binding protein [Acinetobacter junii SH205]
gi|262311468|gb|EEY92554.1| single-stranded DNA-binding protein [Acinetobacter junii SH205]
Length = 194
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWTDKNTGER--KEQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEI 100
>gi|425748098|ref|ZP_18866086.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-348]
gi|425491644|gb|EKU57924.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-348]
Length = 193
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG + + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEISQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 100
>gi|425744361|ref|ZP_18862419.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-323]
gi|425491205|gb|EKU57491.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-323]
Length = 191
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWMDKSTGER--KEQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
HN LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 HNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEI 100
>gi|400288810|ref|ZP_10790842.1| single-strand binding protein [Psychrobacter sp. PAMC 21119]
Length = 207
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K II G + P + NG +VT SV T + + G K + +WHRI++
Sbjct: 1 MRGVNKVIIIGNLGADPEARQFSNGGSVTNISVATSEQWTDKQSGEKK--EATEWHRISL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + L K S VY+EG + R Y D NG+ + I EI
Sbjct: 59 FNR-LGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|71066238|ref|YP_264965.1| single-strand binding protein [Psychrobacter arcticus 273-4]
gi|71039223|gb|AAZ19531.1| single-strand binding protein [Psychrobacter arcticus 273-4]
Length = 213
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K II G + P + NG +VT SV T + + G K + +WHRI++
Sbjct: 1 MRGVNKVIIIGNLGADPEARQFNNGGSVTNISVATSEQWTDKQSGEKR--EATEWHRISL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + L K S VY+EG + R Y D NG+ + I EI
Sbjct: 59 FNR-LGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|93006782|ref|YP_581219.1| single-strand binding protein [Psychrobacter cryohalolentis K5]
gi|92394460|gb|ABE75735.1| single-strand binding protein [Psychrobacter cryohalolentis K5]
Length = 219
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K II G + P + NG +VT SV T + + G K + +WHRI++
Sbjct: 1 MRGVNKVIIIGNLGADPEARQFNNGGSVTNISVATSEQWTDKQSGEKR--EATEWHRISL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + L K S VY+EG + R Y D NG+ + I EI
Sbjct: 59 FNR-LGEIAAQYLRKGSKVYIEGSLRTRKYQDP-NGQDRYITEI 100
>gi|169794714|ref|YP_001712507.1| single-strand binding protein (helix-destabilizing protein)
[Acinetobacter baumannii AYE]
gi|417563263|ref|ZP_12214142.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|421198782|ref|ZP_15655947.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|421621117|ref|ZP_16062041.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
gi|421641424|ref|ZP_16081966.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|421646656|ref|ZP_16087101.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|421700403|ref|ZP_16139919.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|169147641|emb|CAM85504.1| putative Single-strand binding protein (Helix-destabilizing
protein) [Acinetobacter baumannii AYE]
gi|395525845|gb|EJG13934.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC137]
gi|395565678|gb|EJG27325.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC109]
gi|404570110|gb|EKA75188.1| single-stranded DNA-binding protein [Acinetobacter baumannii IS-58]
gi|408515219|gb|EKK16808.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-235]
gi|408517289|gb|EKK18834.1| single-stranded DNA-binding protein [Acinetobacter baumannii
IS-251]
gi|408698802|gb|EKL44289.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC074]
Length = 117
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RG++K I+ G + P+ K +NG + FS+ T + + G D + +WHRI
Sbjct: 1 MRGINKVILVGMLGANPIPKQFQNGGSYAQFSIATSEKYQDKRTG--DWIENTEWHRIVA 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
HN LG A + L K S VY+EG + R + D N E
Sbjct: 59 HNR-LGEIACQFLKKGSKVYIEGSLHTRKWTDQNNQE 94
>gi|421668653|ref|ZP_16108687.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
gi|410379142|gb|EKP31747.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC087]
Length = 117
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RG++K I+ G + P+ K +NG + FS+ T + + G D + +WHRI
Sbjct: 1 MRGINKVILVGMLGANPIPKQFQNGGSYAQFSIATSEKYQDKRTG--DWIENTEWHRIVA 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
HN LG A + L K S VY+EG + R + D N E
Sbjct: 59 HNR-LGEIACQILKKGSKVYIEGSLHTRKWTDQNNQE 94
>gi|148653789|ref|YP_001280882.1| single-strand binding protein [Psychrobacter sp. PRwf-1]
gi|148572873|gb|ABQ94932.1| single-strand binding protein [Psychrobacter sp. PRwf-1]
Length = 230
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K II G + + P + NG +VT SV T + + G K + +WHR+ +
Sbjct: 1 MRGVNKVIIIGNLGNDPETRQFSNGGSVTNISVATSEQWTDKQTGEKR--EATEWHRVTL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 FNR-LGEIAAQYLRKGSKVYIEGSLRTRKWQDQ-NGQDRYTTEI 100
>gi|114765567|ref|ZP_01444668.1| single-strand binding protein [Pelagibaca bermudensis HTCC2601]
gi|114542016|gb|EAU45049.1| single-strand binding protein [Roseovarius sp. HTCC2601]
Length = 159
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V FS+ T + R G D + +WHR+++ NE
Sbjct: 5 VNKVILVGHLGADPELRTFQNGGKVCNFSLATSETWKDRNTG--DRRERTEWHRVSILNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 GLCSIAERYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|333369819|ref|ZP_08461914.1| single-stranded DNA-binding protein [Psychrobacter sp. 1501(2011)]
gi|332969465|gb|EGK08485.1| single-stranded DNA-binding protein [Psychrobacter sp. 1501(2011)]
Length = 219
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RG++K II G + P + NG +VT SV T + + G K + +WHRI++
Sbjct: 1 MRGINKVIIIGNLGADPETRQFSNGGSVTNISVATSEQWTDKQTGEKR--EATEWHRISL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 FNR-LGEIAAQYLRKGSKVYIEGSLRTRKWQDQ-NGQDRYTTEI 100
>gi|350563309|ref|ZP_08932131.1| single-strand binding protein [Thioalkalimicrobium aerophilum AL3]
gi|349779173|gb|EGZ33520.1| single-strand binding protein [Thioalkalimicrobium aerophilum AL3]
Length = 186
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P + NG + SV T ++ R G + + +WHR+ +
Sbjct: 1 MRGVNKVILVGTLGRDPEVRYAANGNAIANLSVATSEQWNDRATGERQ--ERTEWHRVVI 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D G+ K EI I + G
Sbjct: 59 FGK-LAEIAQQYLTKGSQVYLEGKLQTRKWQDQATGQDKYSTEIVIDQGG 107
>gi|334143263|ref|YP_004536419.1| single-strand binding protein [Thioalkalimicrobium cyclicum ALM1]
gi|333964174|gb|AEG30940.1| single-strand binding protein [Thioalkalimicrobium cyclicum ALM1]
Length = 192
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P + NG + SV T ++ R G + + +WHR+ +
Sbjct: 1 MRGVNKVILVGTLGRDPEVRFAANGNAIANLSVATSEQWNDRATGERQ--ERTEWHRVVI 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY EG ++ R + D G+ K EI I + G
Sbjct: 59 FGK-LAEIAQQYLTKGSQVYFEGKLQTRKWQDQATGQDKYSTEIVIDQGG 107
>gi|347758387|ref|YP_004865949.1| ssDNA-binding protein [Micavibrio aeruginosavorus ARL-13]
gi|347590905|gb|AEP09947.1| single-strand binding family protein [Micavibrio aeruginosavorus
ARL-13]
Length = 161
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + + P +++++G V S+ T + + G + + QWHR+ + N+
Sbjct: 5 VNKVILVGNLGNDPDVRMMQSGGKVVNLSIATSESWKDKNSGERQ--ERTQWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + A + L K + VY+EG +E R Y D +G+ K E+ +R
Sbjct: 63 NLATVAERYLKKGAKVYIEGQLETRKYTDK-DGQEKYTTEVVLR 105
>gi|421674098|ref|ZP_16114034.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
gi|410385441|gb|EKP37934.1| single-stranded DNA-binding protein [Acinetobacter baumannii
OIFC065]
Length = 117
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G V P+ K NG + FS+ T + + G D + +WHRI
Sbjct: 1 MRGVNKVILVGMVGANPISKHFPNGGSYAQFSIATSEKYQDKRTG--DWIENTEWHRIVA 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+N LG A + L K S VY+EG + R + D
Sbjct: 59 NNR-LGEIACQFLKKGSKVYIEGSLHTRKWTD 89
>gi|424740791|ref|ZP_18169168.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-141]
gi|422945442|gb|EKU40395.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-141]
Length = 195
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +HN
Sbjct: 6 VNKVILIGSLGKDPETKSFPNGGSLTQFSIATSDSWVDKNTGERK--EQTEWHRIVLHNR 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 64 -LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 102
>gi|425741495|ref|ZP_18859641.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
gi|425492229|gb|EKU58495.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
Length = 201
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 88 IICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGS 147
I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +HN LG
Sbjct: 15 ILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKTSGERK--EQTEWHRIVLHNR-LGE 71
Query: 148 YAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
A + L K S VY+EG + R + D NG+ + EI
Sbjct: 72 IAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 107
>gi|425743047|ref|ZP_18861140.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
gi|445450945|ref|ZP_21444639.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
gi|425484511|gb|EKU50912.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-487]
gi|444755694|gb|ELW80270.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
Length = 193
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +HN
Sbjct: 6 VNKVILIGSLGKDPETKSFPNGGSLTQFSIATSESWVDKNTGERK--EQTEWHRIVLHNR 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 64 -LGEIAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 102
>gi|406035966|ref|ZP_11043330.1| SsDNA-binding protein controls activity of RecBCD nuclease
[Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 198
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P K NG ++T FS+ T + + G + + +WHRI +
Sbjct: 1 MRGVNKVILVGTLGKDPETKTFPNGGSLTQFSIATSESWVDKNSGERK--EQTEWHRIVL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + L K S VY+EG + R + D NG+ + EI
Sbjct: 59 PNR-LGEIAQQYLRKGSKVYIEGSLRTRQWTDQ-NGQERYSTEI 100
>gi|440802075|gb|ELR23014.1| singlestrand binding protein family [Acanthamoeba castellanii str.
Neff]
Length = 168
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 74 DPRRGWGFRGVHKAIICGKVKDTPVQKILRNGK-TVTIFSVGTGGLFDQRIVGSKDLPKP 132
+P RG++K I+ G P + +G +VT F + T ++ + + + KP
Sbjct: 20 NPFVAKASRGINKVILLGNAGAEPKMRTYNDGTASVTYFPLATNQIYTNK--SGERVNKP 77
Query: 133 VQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
QWH I ++N+ L A K + K S VYVEG + R Y D+ E K I EI +
Sbjct: 78 -QWHNIVIYNDNLSQVAQKTVKKGSLVYVEGALSTRTYKDATGAE-KTICEIIL 129
>gi|445453572|ref|ZP_21445173.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
gi|444753366|gb|ELW78020.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-A-92]
Length = 200
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 88 IICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGS 147
I+ G + P K NG ++T FS+ T ++ + G + + +WHRI +HN LG
Sbjct: 15 ILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERK--EQTEWHRIVLHNR-LGE 71
Query: 148 YAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
A + L K S VY+EG + R + D NG+ + EI
Sbjct: 72 IAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 107
>gi|217978382|ref|YP_002362529.1| single-strand binding protein [Methylocella silvestris BL2]
gi|217503758|gb|ACK51167.1| single-strand binding protein [Methylocella silvestris BL2]
Length = 168
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + +G V FS+ T + + G + +WH I + NE
Sbjct: 5 VNKVILIGNLGRDPETRRMNSGDAVVSFSLATTDSWRDKATGER--KDRTEWHNIVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + K S VYVEG ++ R Y D +G + + EI ++R
Sbjct: 63 NLGKIADQYCKKGSKVYVEGQLQTREYTDK-DGNQRKVTEIVLQR 106
>gi|169634207|ref|YP_001707943.1| single-strand binding protein (helix-destabilizing protein)
[Acinetobacter baumannii SDF]
gi|169152999|emb|CAP02055.1| putative Single-strand binding protein (Helix-destabilizing
protein) [Acinetobacter baumannii]
Length = 117
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RG++K I+ G + P+ + NG ++ FS+ T + + G D + +WHRI
Sbjct: 1 MRGINKVILVGSLGADPITRQFPNGSSIANFSIATSEKWQDKRTG--DWIENTEWHRIVA 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+N+ LG A K L K S V++EG + R + D
Sbjct: 59 NNK-LGEIAQKILKKGSKVFIEGSLRTRQWTD 89
>gi|424744152|ref|ZP_18172452.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-141]
gi|422943062|gb|EKU38091.1| single-stranded DNA-binding protein [Acinetobacter baumannii
WC-141]
Length = 205
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 88 IICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGS 147
I+ G + P K NG ++T FS+ T + + G + + +WHRI +HN LG
Sbjct: 15 ILVGTLGRDPETKTFPNGGSLTQFSIATSEAWTDKTSGERK--EQTEWHRIVLHNR-LGE 71
Query: 148 YAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
A + L K S VY+EG + R + D NG+ + EI
Sbjct: 72 IAQQFLRKGSKVYIEGSLRTRQWTDQ-NGQERYTTEI 107
>gi|91763283|ref|ZP_01265247.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1002]
gi|91717696|gb|EAS84347.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1002]
Length = 152
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P K + NGK+V S+ T + + G K + +WHRI V N+
Sbjct: 5 LNKVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKTTGEK--KEKTEWHRIVVFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + + L K + +YVEG I R + D +G+ K EI I+
Sbjct: 63 GLVNVVQQYLKKGAQIYVEGQIATRKWKDEQSGQDKYSTEIVIQ 106
>gi|257454594|ref|ZP_05619850.1| single-stranded DNA-binding protein [Enhydrobacter aerosaccus SK60]
gi|257447904|gb|EEV22891.1| single-stranded DNA-binding protein [Enhydrobacter aerosaccus SK60]
Length = 219
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K II G + P K NG +VT +V T ++ + G + + +WHRI++
Sbjct: 1 MRGVNKVIIVGNLGSDPEVKQFANGGSVTRIAVATSEQWNDKQTGERR--EQTEWHRISL 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N+ LG A + L K S VY+EG + Y D
Sbjct: 59 FNK-LGEIAAQYLRKGSQVYIEGSLRTSKYTD 89
>gi|71083676|ref|YP_266396.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062789|gb|AAZ21792.1| single-strand binding protein (ssb) [Candidatus Pelagibacter ubique
HTCC1062]
Length = 152
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P K + NGK+V S+ T + + G K + +WHRI V N+
Sbjct: 5 LNKVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKTTGEK--KEKTEWHRIVVFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + + L K + +YVEG I R + D +G+ K EI I+
Sbjct: 63 GLVNVVQQYLKKGAQIYVEGQIATRKWKDEQSGQDKYSTEIVIQ 106
>gi|421790024|ref|ZP_16226262.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
gi|410396348|gb|EKP48619.1| single-stranded DNA-binding protein [Acinetobacter baumannii
Naval-82]
Length = 108
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K + G + P K NG +VT FSV T + + G + + +WHRI N
Sbjct: 4 VNKVTVMGVLGRDPETKQFPNGGSVTTFSVATTEFWKDKTTGERK--EATEWHRITTSNR 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
L A K L K VY+EG + R + DS E K I EI
Sbjct: 62 -LAEIASKYLKKGGKVYIEGSLRTRKWKDSKGAE-KEITEI 100
>gi|430376136|ref|ZP_19430539.1| single-strand binding protein [Moraxella macacae 0408225]
gi|429541367|gb|ELA09395.1| single-strand binding protein [Moraxella macacae 0408225]
Length = 264
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K II G++ + PV + NG VT SV T + + G D + +WHR++
Sbjct: 1 MRGVNKVIIVGRLGNDPVTRQFANGGNVTNISVATSEQWTDKQTG--DRREATEWHRVSF 58
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A L K S+VYVEG + Y D
Sbjct: 59 FGK-LADIAANYLKKGSAVYVEGSLRTSKYTD 89
>gi|407781465|ref|ZP_11128683.1| single-strand binding protein [Oceanibaculum indicum P24]
gi|407207682|gb|EKE77613.1| single-strand binding protein [Oceanibaculum indicum P24]
Length = 170
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++NG+ V ++ T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILIGNLGRDPEIRSMQNGQKVANLALATSESWRDRQSGER--KERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A K L K S +Y+EG ++ R + D +G+ K EI ++R
Sbjct: 63 NLIDVAEKYLRKGSKIYIEGSLQTRKWQDQ-SGQEKYTTEIVLQR 106
>gi|393723018|ref|ZP_10342945.1| single-stranded DNA-binding protein (SSB) [Sphingomonas sp. PAMC
26605]
Length = 185
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P K +NG V + T + + G + + +WH +A+ NE
Sbjct: 6 VNKVIIIGNLGRDPESKSFQNGGKVVNLRIATSETWKDKNTGER--KEQTEWHSVAIFNE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG A + L K S VY+EG ++ R + D+ +G K EI ++
Sbjct: 64 ALGGVAERYLRKGSKVYIEGALKTRKWQDA-SGNDKYSTEIVLQ 106
>gi|406706227|ref|YP_006756580.1| single stranded DNA-binding protein [alpha proteobacterium HIMB5]
gi|406652003|gb|AFS47403.1| single stranded DNA-binding protein [alpha proteobacterium HIMB5]
Length = 152
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P K + NGK+V S+ T + + G K + +WHR+ V NE
Sbjct: 5 LNKVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKNTGEK--KEKTEWHRVVVFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + + L K + +YVEG + R + D +G+ K EI I+
Sbjct: 63 GLVNVVQQYLKKGAQIYVEGQLTTRKWKDEQSGQDKYSTEIVIQ 106
>gi|52840601|ref|YP_094400.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776302|ref|YP_005184734.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52627712|gb|AAU26453.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364507111|gb|AEW50635.1| single strand binding protein [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 162
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT SV T + + G K +WHR+
Sbjct: 6 RGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQ--DRTEWHRVVCF 63
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N LG A + + K S +YVEG + R + D
Sbjct: 64 NR-LGEIAGEYIRKGSKLYVEGSLRTRKWQD 93
>gi|54296392|ref|YP_122761.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Legionella pneumophila str. Paris]
gi|397662924|ref|YP_006504462.1| ssDNA-binding protein [Legionella pneumophila subsp. pneumophila]
gi|397666036|ref|YP_006507573.1| ssDNA-binding protein [Legionella pneumophila subsp. pneumophila]
gi|53750177|emb|CAH11569.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella pneumophila str. Paris]
gi|395126335|emb|CCD04516.1| Single-stranded DNA-binding protein [Legionella pneumophila subsp.
pneumophila]
gi|395129447|emb|CCD07677.1| Single-stranded DNA-binding protein [Legionella pneumophila subsp.
pneumophila]
Length = 159
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT SV T + + G K +WHR+
Sbjct: 3 RGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQ--DRTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N LG A + + K S +YVEG + R + D
Sbjct: 61 NR-LGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|344924255|ref|ZP_08777716.1| single-stranded DNA-binding protein [Candidatus Odyssella
thessalonicensis L13]
Length = 163
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K + G++ P + +G + SV T + R G K + +WHR+ + NE
Sbjct: 5 VNKVTLVGRLGKDPEVRNSPDGAKIVTMSVATSEAWKDRSSGEK--KERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + L K S VYVEG ++ R + D G K E+ I+R
Sbjct: 63 KLGEIAERYLKKGSQVYVEGSLQTRKWADQ-QGIEKYTTEVVIQR 106
>gi|296105904|ref|YP_003617604.1| single-strand DNA-binding protein [Legionella pneumophila 2300/99
Alcoy]
gi|295647805|gb|ADG23652.1| single-strand DNA-binding protein [Legionella pneumophila 2300/99
Alcoy]
Length = 159
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT SV T + + G K +WHR+
Sbjct: 3 RGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQ--DRTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + + K S +YVEG + R + D G+ + EI
Sbjct: 61 NR-LGEIAGEYIRKGSKLYVEGSLRTRKWQDQ-QGQDRYTTEI 101
>gi|148361028|ref|YP_001252235.1| single-strand binding protein [Legionella pneumophila str. Corby]
gi|148282801|gb|ABQ56889.1| Single-strand binding protein (SSB) (Helix- destabilizing protein)
[Legionella pneumophila str. Corby]
Length = 159
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT SV T + + G K +WHR+
Sbjct: 3 RGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQ--DRTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N LG A + + K S +YVEG + R + D
Sbjct: 61 NR-LGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|307609164|emb|CBW98621.1| single-strand binding protein [Legionella pneumophila 130b]
Length = 159
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT SV T + + G K +WHR+
Sbjct: 3 RGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQ--DRTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N LG A + + K S +YVEG + R + D
Sbjct: 61 NR-LGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|54293348|ref|YP_125763.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Legionella pneumophila str. Lens]
gi|53753180|emb|CAH14627.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella pneumophila str. Lens]
Length = 159
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT SV T + + G K +WHR+
Sbjct: 3 RGINKVILVGNVGADPDVRYLPNGNAVTTLSVATSETWKDKTTGEKQ--DRTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N LG A + + K S +YVEG + R + D
Sbjct: 61 NR-LGEIAGEYIRKGSKLYVEGSLRTRKWQD 90
>gi|315500085|ref|YP_004088888.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
gi|315418097|gb|ADU14737.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
Length = 172
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + L +G+ V +V T + ++ G + + +WHR+ + N+
Sbjct: 5 VNKVIIIGNLGKDPEIRTLNSGERVANLTVATSEQWRDKMTGERK--EKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR-DGN 191
L A + L K S+VY+EG ++ R + D G K EI ++R +GN
Sbjct: 63 NLAKIAEQYLRKGSTVYLEGSLQTRKWTDQ-QGVEKYTTEIVLQRFNGN 110
>gi|254293783|ref|YP_003059806.1| single-strand binding protein [Hirschia baltica ATCC 49814]
gi|254042314|gb|ACT59109.1| single-strand binding protein [Hirschia baltica ATCC 49814]
Length = 158
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + NG +V F+V T + R G + + +WHR+AV +E
Sbjct: 5 VNKVILVGNLGRDPEIRQFPNGGSVASFTVATSESWKDRNSGERK--EKTEWHRVAVFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGNS 192
L + + K S VY+EG +E R + D+ G+ K E+ +R G++
Sbjct: 63 GLVKIVERYVKKGSKVYIEGQLETRKWTDN-QGQEKYTTEVVLRNFGST 110
>gi|417852657|ref|ZP_12498173.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338216470|gb|EGP02560.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 150
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + P K++ NG VT SV T ++ + G K + V+WHRI ++
Sbjct: 3 GVNKVIIVGNLGQDPDHKVMTNGNPVTNISVATSEVWADKASGEK--REVVEWHRITLYQ 60
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
A + L K S VY+EG + R + D NG+ + EI
Sbjct: 61 R-QADIAAQFLKKGSKVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|393720329|ref|ZP_10340256.1| single-stranded DNA-binding protein (SSB) [Sphingomonas echinoides
ATCC 14820]
Length = 183
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V + T + + G + + +WH +A+ NE
Sbjct: 6 VNKVIIVGNLGRDPESRTFQNGGKVVNLRIATSETWKDKNTGER--KEQTEWHSVAIFNE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG A + L K S VY+EG ++ R + D+ +G K EI ++
Sbjct: 64 ALGGVAERYLRKGSKVYIEGALKTRKWQDA-SGADKYSTEIVLQ 106
>gi|260575189|ref|ZP_05843189.1| single-strand binding protein [Rhodobacter sp. SW2]
gi|259022449|gb|EEW25745.1| single-strand binding protein [Rhodobacter sp. SW2]
Length = 174
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V ++ T + + G + + +WHR+++ NE
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLNIATSETWRDKASGERK--ERTEWHRVSILNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S+VY+EG +E R + D +G + EI +R
Sbjct: 63 PLAKIAEQYLKKGSTVYIEGQLETRKWQDQ-SGAERYTTEIVLR 105
>gi|386744665|ref|YP_006217844.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Providencia stuartii MRSN 2154]
gi|384481358|gb|AFH95153.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Providencia stuartii MRSN 2154]
Length = 182
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K+II G + D P+ + NG FSV T + + G K + WH I +
Sbjct: 4 RGVNKSIILGSLGDDPIVRYSPNGTAFANFSVATSETWKDKNTGEKR--ERTDWHNIVIQ 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R Y + +G+ K I E+ + DG
Sbjct: 62 GK-LAEVAGQYLKKGSQVYIEGKMRTRKYQGN-DGQDKYITEVIVGIDG 108
>gi|392952531|ref|ZP_10318086.1| single-strand binding protein [Hydrocarboniphaga effusa AP103]
gi|391861493|gb|EIT72021.1| single-strand binding protein [Hydrocarboniphaga effusa AP103]
Length = 175
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + NG +VT +V T + + ++ +WH + H
Sbjct: 3 RGINKVILIGNLGKDPEARSFPNGGSVTNITVATSDSWRDKDGNQQER---TEWHNVVFH 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N+ LG A + L K S VY+EG + R + D +G+ + EI
Sbjct: 60 NK-LGEIAAQYLRKGSKVYIEGSLRTRKWQDKTSGQDRYTTEI 101
>gi|294649671|ref|ZP_06727083.1| single-stranded DNA-binding protein (controls activity of RecBCD
nuclease) [Acinetobacter haemolyticus ATCC 19194]
gi|292824450|gb|EFF83241.1| single-stranded DNA-binding protein (controls activity of RecBCD
nuclease) [Acinetobacter haemolyticus ATCC 19194]
Length = 108
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+KAI+ G + P K NG +T FS+ T + + G + + +WHRIA N
Sbjct: 4 VNKAILMGVLGRDPETKNFPNGGIITTFSIATTEQWKDKTTGERK--EATEWHRIATSNR 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
L A K L K S Y+EG + R + D NG + I E+
Sbjct: 62 -LAEIASKYLKKGSKAYIEGSLRTRKWKDQ-NGVDREIVEV 100
>gi|37525024|ref|NP_928368.1| hypothetical protein plu1039 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36784450|emb|CAE13334.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 154
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G++ P + G TV + S+ T + R G + + +WHR+ +
Sbjct: 4 RGVNKVILIGRLGQEPEVRYRPEGDTVAVLSLATSETWRDRQTGEQK--ERTEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VY+EG + R + D +G+ + E+ + + G
Sbjct: 62 GKLAEIAGEY----LKKGSQVYIEGQLRTRKWFDKASGQDRYSTEVVLNQQGT 110
>gi|114570434|ref|YP_757114.1| single-strand binding protein [Maricaulis maris MCS10]
gi|114340896|gb|ABI66176.1| single-strand binding protein [Maricaulis maris MCS10]
Length = 164
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + NG V SV T + + G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGRDPEIRRMNNGDPVVNLSVATSESWRDKSSGER--REKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A L K S VYVEG ++ R + D NG+ K E+ ++R
Sbjct: 63 NLAKVAENYLKKGSKVYVEGQLQTRKWTDQ-NGQEKYSTEVVLQR 106
>gi|347735637|ref|ZP_08868470.1| single stranded DNA-binding protein [Azospirillum amazonense Y2]
gi|346921093|gb|EGY01932.1| single stranded DNA-binding protein [Azospirillum amazonense Y2]
Length = 206
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++NG V + T + R G + + QWH++ + NE
Sbjct: 22 VNKVILIGNLGKEPEVRSMQNGGKVCNLRIATSETWKDRNSGERQ--ERTQWHQVVIFNE 79
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ K E+ +R
Sbjct: 80 ALIGVAERFLKKGSKVYIEGQLETRKWTDQ-SGQEKYTTEVVLR 122
>gi|148555113|ref|YP_001262695.1| single-strand binding protein [Sphingomonas wittichii RW1]
gi|148500303|gb|ABQ68557.1| single-strand binding protein [Sphingomonas wittichii RW1]
Length = 151
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V V T + R G + +WH++A+HNE
Sbjct: 5 VNKVIIVGHLGRDPESRSFQNGGKVVGLRVATSEQWKDRSTGER--RDRTEWHQVAIHNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + A L K S VY+EG + R + D G + EI ++
Sbjct: 63 GLATIAESYLRKGSKVYLEGQLRTRKWTDQ-QGVERYTTEIVLQ 105
>gi|395491201|ref|ZP_10422780.1| single-stranded DNA-binding protein (SSB) [Sphingomonas sp. PAMC
26617]
Length = 186
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P K +NG V + T + + G + + +WH +A+ NE
Sbjct: 5 VNKVIIVGNLGRDPESKSFQNGGKVVNLRIATSETWKDKNSGER--KEQTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG A + L K S VY+EG ++ R + D+ G+ + EI ++
Sbjct: 63 ALGGVAERYLRKGSKVYIEGALKTRKWQDA-QGQDRYSTEIVLQ 105
>gi|209964376|ref|YP_002297291.1| ssDNA-binding protein [Rhodospirillum centenum SW]
gi|209957842|gb|ACI98478.1| single-strand DNA binding protein, putative [Rhodospirillum
centenum SW]
Length = 188
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++NG V + T + R G + + QWH + + NE
Sbjct: 5 VNKVILIGNLGKDPEIRNMQNGGKVCNLRIATSENWKDRNTGERQ--ERTQWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG +E R + D +G+ K E+ +R+
Sbjct: 63 NLAQIAERYLRKGSKVYIEGQLETRKWTDQ-SGQEKYTTEVVLRQ 106
>gi|27904962|ref|NP_778088.1| single-strand binding protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|32699636|sp|Q89A53.1|SSB_BUCBP RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|27904360|gb|AAO27193.1| single-strand binding protein [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 166
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + ++NG VT ++ T + + G ++ + +WHRI
Sbjct: 4 RGINKVILIGYLGQDPDVRYMQNGSAVTNITLATSETWKDKNNG--EIKEKTEWHRIVFF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
N EI G Y L K S VY+EG ++ R + D NG + I EI +
Sbjct: 62 NKLAEIAGEY----LKKGSQVYIEGSLQTRKWKDQ-NGIERYITEIIV 104
>gi|254456392|ref|ZP_05069821.1| single-strand binding protein family protein [Candidatus
Pelagibacter sp. HTCC7211]
gi|207083394|gb|EDZ60820.1| single-strand binding protein family protein [Candidatus
Pelagibacter sp. HTCC7211]
Length = 150
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P K + NGK+V S+ T + + G K + +WHRI V NE
Sbjct: 5 LNKVLLIGRLGADPEIKQMVNGKSVARLSLATSQSWKDKNTGEK--KEKTEWHRIVVFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + + L K + +YVEG + R + D +G+ K EI ++
Sbjct: 63 GLVNVIQQYLKKGAQIYVEGQLTTRKWKDEQSGQDKYSTEIVLQ 106
>gi|119502955|ref|ZP_01625040.1| single-stranded DNA-binding protein [marine gamma proteobacterium
HTCC2080]
gi|119461301|gb|EAW42391.1| single-stranded DNA-binding protein [marine gamma proteobacterium
HTCC2080]
Length = 164
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P ++ + G +T S+ T + + G + + +WHR+
Sbjct: 4 RGINKVILVGNLGSDPENRMSQAGAAITNLSIATSETWKDKNTGQQ--QERTEWHRVVFF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N L A + L K S VYVEG + R + D G+ + EI
Sbjct: 62 NR-LAEVAAEYLRKGSKVYVEGTLRTRKWQDKQTGQDRYTTEIV 104
>gi|388457563|ref|ZP_10139858.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Fluoribacter dumoffii Tex-KL]
Length = 156
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT S+ T + + G K + +WHR+
Sbjct: 3 RGINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSEAWKDKATGEKQ--ERTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N LG A + + K S +YVEG + R + D
Sbjct: 61 NR-LGEIAGEYVRKGSKLYVEGSLRTRKWQD 90
>gi|152979537|ref|YP_001345166.1| single-strand binding protein [Actinobacillus succinogenes 130Z]
gi|150841260|gb|ABR75231.1| single-strand binding protein [Actinobacillus succinogenes 130Z]
Length = 159
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G++ + P + + NG+ V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGRLGNDPEIRTMPNGEAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI+G Y L K S +YVEG + R + D NG+ + EI
Sbjct: 61 RQAEIVGEY----LRKGSQIYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|385233085|ref|YP_005794427.1| ssDNA-binding protein [Ketogulonicigenium vulgare WSH-001]
gi|343461996|gb|AEM40431.1| Single-stranded DNA-binding protein [Ketogulonicigenium vulgare
WSH-001]
Length = 195
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 78 GWGFRG-VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWH 136
GW G V+K I+ G + P + NG V + T + R G + + +WH
Sbjct: 18 GWRMAGSVNKVILIGNLGRDPEVRSFPNGGKVVNLRIATSETWRDRNSGERK--ERTEWH 75
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+A+ +E LG+ A K L K S VY+EG +E R + D G + E+ +R
Sbjct: 76 SVAIFSEPLGNIAEKYLRKGSKVYLEGQLETRKWQDQA-GADRYSTEVVLR 125
>gi|78484672|ref|YP_390597.1| single-strand binding protein [Thiomicrospira crunogena XCL-2]
gi|78362958|gb|ABB40923.1| single-strand binding protein [Thiomicrospira crunogena XCL-2]
Length = 201
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P K NG + +V T ++ + G K + +WHR+ +
Sbjct: 3 RGVNKVILVGTLGRDPEIKYAANGNAIANLNVATSEQWNDKASGQKQ--EKTEWHRVVIF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S VY+EG ++ R + D G+ + E+ I +G
Sbjct: 61 GKLAEIAGQY----LTKGSQVYLEGKLQTRKWQDQNTGQDRYSTEVVIDFNG 108
>gi|114327884|ref|YP_745041.1| single-strand DNA binding protein [Granulibacter bethesdensis
CGDNIH1]
gi|114316058|gb|ABI62118.1| single-strand DNA binding protein [Granulibacter bethesdensis
CGDNIH1]
Length = 173
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G V F++ T ++ R G + + +WHR+ V N+
Sbjct: 5 VNKVILIGNLGRDPEVRNTQDGGKVVNFTLATSETWNDRASGERK--ERTEWHRVVVFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VYVEG ++ R + D G+ K E+ I R
Sbjct: 63 RLADIAERYLRKGTKVYVEGALQTRKWTDQA-GQEKYTTEVVISR 106
>gi|404251840|ref|ZP_10955808.1| single-strand binding protein [Sphingomonas sp. PAMC 26621]
Length = 188
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P K +NG V + T + + G + + +WH +A+ NE
Sbjct: 5 VNKVIIVGNLGRDPESKSFQNGGKVVNLRIATSESWKDKNSGER--KEQTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG A + L K S VY+EG ++ R + D+ G+ + EI ++
Sbjct: 63 ALGGVAERYLRKGSKVYIEGALKTRKWQDA-QGQDRYSTEIVLQ 105
>gi|219870626|ref|YP_002475001.1| single-strand DNA-binding protein [Haemophilus parasuis SH0165]
gi|219690830|gb|ACL32053.1| single-strand DNA-binding protein [Haemophilus parasuis SH0165]
Length = 172
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV-- 140
GV+K II G + + P + + NG V SV T ++ ++ G + + +WHRI
Sbjct: 3 GVNKVIIVGNLGNDPDMRTMPNGDAVATLSVATSESWNDKMTGERR--EVTEWHRIVFFR 60
Query: 141 -HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSKVYVEGKLKTRKWQDQ-NGQDRYTTEI 100
>gi|310815567|ref|YP_003963531.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|308754302|gb|ADO42231.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
Length = 208
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 78 GWGFRG-VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWH 136
GW G V+K I+ G + P + NG V + T + R G + + +WH
Sbjct: 31 GWRMAGSVNKVILIGNLGRDPEVRSFPNGGKVVNLRIATSETWRDRNSGERK--ERTEWH 88
Query: 137 RIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+A+ +E LG+ A K L K S VY+EG +E R + D G + E+ +R
Sbjct: 89 SVAIFSEPLGNIAEKYLRKGSKVYLEGQLETRKWQDQA-GADRYSTEVVLR 138
>gi|182679033|ref|YP_001833179.1| single-strand binding protein [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182634916|gb|ACB95690.1| single-strand binding protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 180
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + +G+ V FS+ T + ++ G + +WH + + NE
Sbjct: 5 VNKVILIGNLGRDPEVRRMNSGEAVVSFSLATTESWRDKMSGER--RDRTEWHNVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + K S VY+EG ++ R Y D +G + E+ ++R
Sbjct: 63 NLGKIAEQYCKKGSKVYLEGQLQTREYQDR-DGNQRRTTEVVLQR 106
>gi|88704347|ref|ZP_01102061.1| Single-strand binding protein [Congregibacter litoralis KT71]
gi|88701398|gb|EAQ98503.1| Single-strand binding protein [Congregibacter litoralis KT71]
Length = 170
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP-VQWHRIAV 140
RGV+K I+ G + P + + +G +VT S+ T + + G LP+ +WHRI
Sbjct: 4 RGVNKVILVGNLGADPETRFMPSGGSVTNLSLATSETWKDKQTG---LPQERTEWHRIVF 60
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N L A + L K S VYVEG I R + D +G+ + EI
Sbjct: 61 FNR-LAEVAAEYLRKGSKVYVEGSIRTRKWQDQ-SGQDRYTTEIV 103
>gi|410945525|ref|ZP_11377266.1| ssDNA-binding protein [Gluconobacter frateurii NBRC 101659]
Length = 164
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G V FS+ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKVVSFSLATSDTWNDRQSGER--RERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + L K VY+EG++ R + D G+ E+ I R
Sbjct: 63 RLGDVADRFLRKGRKVYLEGELRTRKWTDQ-GGQEHYTTEVVIDR 106
>gi|270157880|ref|ZP_06186537.1| single-stranded DNA-binding protein [Legionella longbeachae D-4968]
gi|289163858|ref|YP_003453996.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella longbeachae NSW150]
gi|269989905|gb|EEZ96159.1| single-stranded DNA-binding protein [Legionella longbeachae D-4968]
gi|288857031|emb|CBJ10846.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Legionella longbeachae NSW150]
Length = 157
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT S+ T + + G K + +WHR+
Sbjct: 3 RGINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSEAWKDKATGEKQ--ERTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N LG A + + K S +YVEG + R + D
Sbjct: 61 NR-LGEIAGEYVRKGSKLYVEGSLRTRKWQD 90
>gi|167856566|ref|ZP_02479272.1| single-stranded DNA-binding protein [Haemophilus parasuis 29755]
gi|167852308|gb|EDS23616.1| single-stranded DNA-binding protein [Haemophilus parasuis 29755]
Length = 179
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV-- 140
GV+K II G + + P + + NG V SV T ++ ++ G + + +WHRI
Sbjct: 3 GVNKVIIVGNLGNDPDMRTMPNGDAVATLSVATSESWNDKMTGERR--EVTEWHRIVFFR 60
Query: 141 -HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSKVYVEGKLKTRKWQDQ-NGQDRYTTEI 100
>gi|425067594|ref|ZP_18470710.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
gi|404600794|gb|EKB01219.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW6]
Length = 176
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+KA+I G + D P + NG FSV T + + G K + WH I++
Sbjct: 4 RGVNKAVIIGNLGDDPTVRYSPNGTAFANFSVATSETWTDKNTGEKR--ERTDWHNISIQ 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG + R Y + +G+ K I E+ +
Sbjct: 62 GKLAEIAGQY----LKKGSQVYIEGKMRTRKYQGN-DGQDKYITEVIV 104
>gi|163793153|ref|ZP_02187129.1| single-strand DNA binding protein [alpha proteobacterium BAL199]
gi|159181799|gb|EDP66311.1| single-strand DNA binding protein [alpha proteobacterium BAL199]
Length = 206
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + F++ T + + G + + +WHR+ + NE
Sbjct: 28 VNKVILVGNLGRDPEVRTTQDGTKIVNFTLATSENWRDKSSGER--RERTEWHRVVIFNE 85
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K SSVYVEG ++ R + D +G+ + E+ ++R
Sbjct: 86 NLARIAEQYLRKGSSVYVEGALQTRKWTDK-DGQERYTTEVVLQR 129
>gi|23014489|ref|ZP_00054302.1| COG0629: Single-stranded DNA-binding protein [Magnetospirillum
magnetotacticum MS-1]
Length = 167
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG + ++ T + R G+ + + +WHR+ + N
Sbjct: 5 VNKVILVGNLGRDPEVRTAQNGDKIVNLNIATSETWKDR--GTGERKEKTEWHRVVIFNP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K SSVY+EG ++ R + D +G+ K E+ I R
Sbjct: 63 NLADVAERYLRKGSSVYIEGALQTRKWTDQ-SGQEKYTTEVVIGR 106
>gi|427428076|ref|ZP_18918118.1| Single-stranded DNA-binding protein [Caenispirillum salinarum AK4]
gi|425882777|gb|EKV31456.1| Single-stranded DNA-binding protein [Caenispirillum salinarum AK4]
Length = 184
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++NG + S+ T + R G K + +WHR+ + +
Sbjct: 5 VNKVILVGNLGRDPEVRTMQNGNKLVNLSIATSETWKDRQTGEKR--ERTEWHRVVIFSP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K SSVY+EG ++ R + D NG+ + E+ ++
Sbjct: 63 PLADIAERFLRKGSSVYIEGQLQTRKWQDQ-NGQDRYSTEVVLQ 105
>gi|146276503|ref|YP_001166662.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
gi|145554744|gb|ABP69357.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
Length = 162
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGER--KERTEWHSVAIFDE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S+VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 NLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYTTEVVLR 105
>gi|365855690|ref|ZP_09395732.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
gi|363718909|gb|EHM02231.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
Length = 172
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R + + +WH +A+ NE
Sbjct: 5 VNKVILVGNLGRDPEVRNFQNGGRVVNLRIATTENYKDR---EGNRQEKTEWHSVAIFNE 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
LG A K L K S VYVEG +E R + D G+ + E+ +R G
Sbjct: 62 RLGEIAEKYLRKGSKVYVEGKLETRKWQDQA-GQDRYSTEVTLRNFG 107
>gi|84686923|ref|ZP_01014807.1| Single-strand DNA binding protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84665120|gb|EAQ11600.1| Single-strand DNA binding protein [Rhodobacterales bacterium
HTCC2654]
Length = 162
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVIIVGNLGRDPEVRTFQNGGKVVNLRIATSENWKDRNTGERR--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLGRIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|146329809|ref|YP_001209056.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
gi|146233279|gb|ABQ14257.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
Length = 169
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G V P +++ NG+ V FS+ T ++ R G K + +WHR +
Sbjct: 3 GVNKVILVGNVGQNPDVRVMTNGEQVANFSLATSMNWNDRQTGEKR--EKTEWHRCVAYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI+G Y + K S +Y+EG +E R + D NG + EI +
Sbjct: 61 RLAEIIGQY----VRKGSKLYIEGRLETRKWQDQ-NGIDRYTTEIIV 102
>gi|452966404|gb|EME71415.1| single-stranded DNA-binding protein [Magnetospirillum sp. SO-1]
Length = 147
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V ++ T + R G + + +WHR+ + N
Sbjct: 5 VNKVILVGNLGRDPEIRTAQNGDKVVNLNIATSETWKDRSTGERK--EKTEWHRVVIFNP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K SSVYVEG ++ R + D G+ K E+ I R
Sbjct: 63 NLADVAERFLRKGSSVYVEGALQTRKWTDQA-GQEKYTTEVVIGR 106
>gi|389877424|ref|YP_006370989.1| single-strand DNA binding protein [Tistrella mobilis KA081020-065]
gi|388528208|gb|AFK53405.1| single-strand DNA binding protein [Tistrella mobilis KA081020-065]
Length = 213
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + +V T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILIGNLGRDPEVRSTQDGMKIVNLAVATSETWRDRQSGER--RERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A K L K S VYVEG ++ R + D G+ K E+ ++R
Sbjct: 63 RLAEVAEKFLRKGSKVYVEGALQTRKWTDQ-QGQEKYTTEVVLQR 106
>gi|421852986|ref|ZP_16285668.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371478837|dbj|GAB30871.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 185
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + FS+ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K VY+EG ++ R + D G+ + E+ I R
Sbjct: 63 RLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDR 106
>gi|258543617|ref|YP_003189050.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01]
gi|384043535|ref|YP_005482279.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-12]
gi|384052052|ref|YP_005479115.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-03]
gi|384055161|ref|YP_005488255.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-07]
gi|384058394|ref|YP_005491061.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-22]
gi|384061035|ref|YP_005500163.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-26]
gi|384064327|ref|YP_005484969.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-32]
gi|384120340|ref|YP_005502964.1| ssDNA-binding protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421850857|ref|ZP_16283800.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
NBRC 101655]
gi|256634695|dbj|BAI00671.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01]
gi|256637751|dbj|BAI03720.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-03]
gi|256640805|dbj|BAI06767.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-07]
gi|256643860|dbj|BAI09815.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-22]
gi|256646915|dbj|BAI12863.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-26]
gi|256649968|dbj|BAI15909.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-32]
gi|256652958|dbj|BAI18892.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656012|dbj|BAI21939.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus IFO
3283-12]
gi|371458321|dbj|GAB29003.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
NBRC 101655]
Length = 186
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + FS+ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGER--RERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K VY+EG ++ R + D G+ + E+ I R
Sbjct: 63 RLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDR 106
>gi|254284222|ref|ZP_04959190.1| single-strand binding protein [gamma proteobacterium NOR51-B]
gi|219680425|gb|EED36774.1| single-strand binding protein [gamma proteobacterium NOR51-B]
Length = 156
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II G + + P ++L +G VT SV T + + G + +WHR+
Sbjct: 4 RGVNKVIIVGNLGNDPEHRMLPSGGAVTNISVATSESWKDKQTGQPQ--ERTEWHRVVFF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N L A + L K S VY+EG + R + D
Sbjct: 62 NR-LAEIAAEYLRKGSKVYLEGSLRTRKWQD 91
>gi|212711471|ref|ZP_03319599.1| hypothetical protein PROVALCAL_02544 [Providencia alcalifaciens DSM
30120]
gi|212685927|gb|EEB45455.1| hypothetical protein PROVALCAL_02544 [Providencia alcalifaciens DSM
30120]
Length = 156
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K+II G + D P + NG FS+ T + + G K + WH I +
Sbjct: 4 RGVNKSIILGNLGDDPNVRYSPNGTAFANFSIATSETWKDKNTGEKR--ERTDWHNIVIQ 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R Y + +G+ K I E+ + DG
Sbjct: 62 GK-LAEVAGQYLKKGSQVYIEGKMRTRKYQGN-DGQEKYITEVIVGIDG 108
>gi|329113793|ref|ZP_08242564.1| Single-stranded DNA-binding protein [Acetobacter pomorum DM001]
gi|326696803|gb|EGE48473.1| Single-stranded DNA-binding protein [Acetobacter pomorum DM001]
Length = 188
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + FS+ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRSSQSGAKIVSFSLATSDTWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K VY+EG ++ R + D G+ + E+ I R
Sbjct: 63 RLADVAERFLRKGRKVYLEGSLQTRKWTDQ-GGQERYTTEVIIDR 106
>gi|419889737|ref|ZP_14410090.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|420093594|ref|ZP_14605241.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
gi|388356686|gb|EIL21376.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|394398791|gb|EJE74929.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
Length = 178
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D+ NG + I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGATRYITEILVKTTGT 109
>gi|332560220|ref|ZP_08414542.1| single-stranded DNA-binding protein [Rhodobacter sphaeroides WS8N]
gi|332277932|gb|EGJ23247.1| single-stranded DNA-binding protein [Rhodobacter sphaeroides WS8N]
Length = 173
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGER--KERTEWHSVAIFDE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S+VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 NLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|296535352|ref|ZP_06897553.1| single-strand binding protein [Roseomonas cervicalis ATCC 49957]
gi|296264320|gb|EFH10744.1| single-strand binding protein [Roseomonas cervicalis ATCC 49957]
Length = 182
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R + + +WH +A+ NE
Sbjct: 5 VNKVILIGNLGKDPEVRNFQNGGRVVNLRLATTDTYKDR---EGNRQERTEWHSVAIFNE 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
LG A K L K S VY+EG +E R + D G+ + E+ +R G
Sbjct: 62 KLGEIAEKYLRKGSKVYIEGKLETRKWQDQA-GQDRYSTEVVLRNFG 107
>gi|262277205|ref|ZP_06054998.1| single-strand binding protein family protein [alpha proteobacterium
HIMB114]
gi|262224308|gb|EEY74767.1| single-strand binding protein family protein [alpha proteobacterium
HIMB114]
Length = 152
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ + P K + NGK V S+ T + + G + + +WHR+ + NE
Sbjct: 5 LNKVLLIGRLGNDPEIKQMSNGKNVARLSLATSETWKDKNTGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + + L K + VY+EG I+ Y D+ NG+ K ++ ++
Sbjct: 63 GLVNVVQQYLKKGAQVYIEGQIQTTKYTDN-NGQEKYSTQVILQ 105
>gi|389694862|ref|ZP_10182956.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
gi|388588248|gb|EIM28541.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
Length = 179
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L NG+ V + T + + G + + +WH + + NE
Sbjct: 5 VNKVILVGNLGRDPEVRRLSNGEPVVNLRIATSETWKDKGTGERK--EKTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VYVEG ++ R + D G+ K E+ ++R
Sbjct: 63 NLARVAEQYLKKGSKVYVEGQLQTRKWTDQ-QGQEKYTTEVVLQR 106
>gi|119478100|ref|ZP_01618179.1| single-strand binding protein [marine gamma proteobacterium
HTCC2143]
gi|119448806|gb|EAW30049.1| single-strand binding protein [marine gamma proteobacterium
HTCC2143]
Length = 194
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P QK + NG VT ++ T + + G + + +WHRI
Sbjct: 3 RGINKVILIGNLGNDPEQKSMPNGNAVTNITLATSESWKDKQTGQQQ--ERTEWHRIVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N EI G Y L K S VY+EG + R + D
Sbjct: 61 NRLAEIAGQY----LNKGSKVYLEGSLRTRKWQD 90
>gi|359298984|ref|ZP_09184823.1| single-stranded DNA-binding protein [Haemophilus [parainfluenzae]
CCUG 13788]
gi|402305597|ref|ZP_10824656.1| single-stranded DNA-binding protein [Haemophilus sputorum HK 2154]
gi|400376710|gb|EJP29597.1| single-stranded DNA-binding protein [Haemophilus sputorum HK 2154]
Length = 173
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSETWTDKTTGERR--ESTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|260583141|ref|ZP_05850922.1| single-strand binding protein [Haemophilus influenzae NT127]
gi|260093853|gb|EEW77760.1| single-strand binding protein [Haemophilus influenzae NT127]
Length = 146
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P ++++NG+ V SV T + + G K +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRVMQNGEQVANISVATSESWTDKNSGEKKT--QTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG ++ R + D+ NG+ + EI
Sbjct: 61 RQAEICGQY----LQKCSQVYIEGRLKTRKWQDN-NGQDRYTTEI 100
>gi|331660280|ref|ZP_08361215.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA206]
gi|331052547|gb|EGI24583.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA206]
Length = 176
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K + VY+EG + R ++D+ NG + I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKTTG 108
>gi|148261030|ref|YP_001235157.1| single-strand binding protein [Acidiphilium cryptum JF-5]
gi|146402711|gb|ABQ31238.1| single-strand binding protein [Acidiphilium cryptum JF-5]
Length = 161
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + +V T ++ ++ G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQ--ERTEWHRVVIMND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
L A + L K S +Y+EG ++ R + D +G+ K EI + R G
Sbjct: 63 RLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIG 108
>gi|126461213|ref|YP_001042327.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638194|ref|YP_002524456.1| ssDNA-binding protein [Rhodobacter sphaeroides KD131]
gi|429207774|ref|ZP_19199030.1| Single-stranded DNA-binding protein [Rhodobacter sp. AKP1]
gi|126102877|gb|ABN75555.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17029]
gi|221158975|gb|ACL99954.1| Single-stranded DNA-binding protein [Rhodobacter sphaeroides KD131]
gi|428189167|gb|EKX57723.1| Single-stranded DNA-binding protein [Rhodobacter sp. AKP1]
Length = 173
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGER--KERTEWHSVAIFDE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S+VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 NLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|78186149|ref|YP_374192.1| single-strand binding protein [Chlorobium luteolum DSM 273]
gi|78166051|gb|ABB23149.1| single-strand binding protein [Chlorobium luteolum DSM 273]
Length = 163
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G + + P + + +G+TV F++ T F S + + +WHRI
Sbjct: 3 RGLNKVMLIGNLGNDPELRTIPSGQTVANFTLATSESFKD---SSGAMQERTEWHRIVAW 59
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K VYVEG I+ R ++D GE K +I +
Sbjct: 60 GRLAEICGQY----LKKGRQVYVEGRIQTRSWDDQKTGEKKYATDIVV 103
>gi|77462337|ref|YP_351841.1| single-strand DNA binding protein [Rhodobacter sphaeroides 2.4.1]
gi|85700436|sp|Q9ZAQ8.2|SSB_RHOS4 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|77386755|gb|ABA77940.1| Single-strand DNA binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 173
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVIIIGNLGRDPEVRSFQNGGKVVNLRIATSEQWRDRASGER--KERTEWHSVAIFDE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S+VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 NLARVAEQYLRKGSTVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|357974006|ref|ZP_09137977.1| single-strand binding protein [Sphingomonas sp. KC8]
Length = 202
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 17 VNKVILVGNLGRDPESRSFQNGGKVVNLRIATSETWKDRATGER--REKTEWHSVAIFNE 74
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D +G K EI ++
Sbjct: 75 GLARTAEQYLRKGSKVYIEGQLQTRKWQDQ-SGADKYSTEIVLQ 117
>gi|326404430|ref|YP_004284512.1| single-stranded DNA-binding protein [Acidiphilium multivorum
AIU301]
gi|325051292|dbj|BAJ81630.1| single-stranded DNA-binding protein [Acidiphilium multivorum
AIU301]
Length = 162
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + +V T ++ ++ G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQ--ERTEWHRVVIMND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
L A + L K S +Y+EG ++ R + D +G+ K EI + R G
Sbjct: 63 RLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIG 108
>gi|389691485|ref|ZP_10180279.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
gi|388588468|gb|EIM28758.1| single stranded DNA-binding protein [Microvirga sp. WSM3557]
Length = 166
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L NG+ V + T + + G + + +WH + + NE
Sbjct: 5 VNKVILVGNLGRDPEVRRLSNGEPVVNLRIATSETWKDKGTGERK--EKTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VYVEG ++ R + D G+ K E+ ++R
Sbjct: 63 NLARVAEQYLKKGSKVYVEGQLQTRKWTDQ-QGQEKYTTEVVLQR 106
>gi|148555367|ref|YP_001262949.1| single-strand binding protein [Sphingomonas wittichii RW1]
gi|148500557|gb|ABQ68811.1| single-strand binding protein [Sphingomonas wittichii RW1]
Length = 195
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V V T + R G + +WH +A+ NE
Sbjct: 5 VNKVILVGNLGRDPESRSFQNGGKVVNLRVATSEQWKDRNTGER--RDKTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + A + L K S VY+EG ++ R + D G+ + E+ ++
Sbjct: 63 ALANVAERYLRKGSKVYLEGQLQTRKWTDQ-QGQERYSTEVVLQ 105
>gi|423143252|ref|ZP_17130888.1| single-strand binding family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379049166|gb|EHY67063.1| single-strand binding family protein [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 182
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V + T + + G ++ + +WHR+ ++
Sbjct: 4 RGVNKVILVGNLGQAPEVRYMPNGGAVANLQLATSDNWRDKQTG--EMKEQTEWHRVVLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R ++D+ NG + I E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRSWDDN-NGVTRYITEVIVNTTG 108
>gi|402819329|ref|ZP_10868897.1| single-stranded DNA-binding protein [alpha proteobacterium
IMCC14465]
gi|402511476|gb|EJW21737.1| single-stranded DNA-binding protein [alpha proteobacterium
IMCC14465]
Length = 156
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + ++G+ + S+ TG + + G + + +WHR+ + +E
Sbjct: 5 INKVILVGNLGADPEIRQTKDGRPIANLSIATGESWKDKNTGERR--EKTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D NG+ K E+ ++
Sbjct: 63 GLAKIAEQYLRKGSKVYIEGQLQTRKWQDQ-NGQDKYTTEVVLQ 105
>gi|149915209|ref|ZP_01903737.1| single-strand binding protein [Roseobacter sp. AzwK-3b]
gi|149810930|gb|EDM70769.1| single-strand binding protein [Roseobacter sp. AzwK-3b]
Length = 169
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRTTGERR--ERTEWHTVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 ALVRLAEQYLRKGSKVYIEGKLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|330993202|ref|ZP_08317139.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
gi|329759753|gb|EGG76260.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
Length = 184
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG + ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRNSQNGAKIVSLTLATSDTWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + L K VY+EG ++ R + D +G+ + E+ + R
Sbjct: 63 RLGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDR 106
>gi|425389436|ref|ZP_18772940.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408320637|gb|EKJ36726.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
Length = 178
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D+ NG ++ I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVIRYITEILVKTTGT 109
>gi|383311901|ref|YP_005364702.1| single-stranded DNA-binding protein [Candidatus Rickettsia
amblyommii str. GAT-30V]
gi|378930561|gb|AFC69070.1| single-stranded DNA-binding protein [Candidatus Rickettsia
amblyommii str. GAT-30V]
Length = 152
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S A + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVAERYITKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|374263385|ref|ZP_09621933.1| single strand binding protein [Legionella drancourtii LLAP12]
gi|363535975|gb|EHL29421.1| single strand binding protein [Legionella drancourtii LLAP12]
Length = 159
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G V P + L NG VT S+ T + + G K +WHR+
Sbjct: 3 RGINKVILIGNVGVDPDVRYLPNGNAVTTLSIATSESWKDKTTGEKQ--DRTEWHRVVCF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N LG A + + K S +YVEG + R + D G+ + EI
Sbjct: 61 NR-LGEIAGQYVRKGSKLYVEGSLRTRKWQDQ-QGQDRYTTEI 101
>gi|418851685|ref|ZP_13406393.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392816616|gb|EJA72539.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
Length = 189
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RG++K I+ G + P + + NG V ++ T + + G ++ + +WHR+ V
Sbjct: 3 LRGINKVILIGNLGQDPELRYMPNGGAVANLTLATSETWRDKQTG--EMRENTEWHRVVV 60
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S VY+EG + R ++D+ NG + + EI + G
Sbjct: 61 FGKLAEIAGEY----LRKGSQVYIEGQLRTRSWDDN-NGVTRYVTEIVVSMQG 108
>gi|83311478|ref|YP_421742.1| single-stranded DNA-binding protein [Magnetospirillum magneticum
AMB-1]
gi|82946319|dbj|BAE51183.1| Single-stranded DNA-binding protein [Magnetospirillum magneticum
AMB-1]
Length = 167
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T + R G + + +WHR+ + N
Sbjct: 5 VNKVILVGNLGRDPEVRTSQDGSKIVNLNIATSETWKDRGTGERK--EKTEWHRVVIFNP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K SSVYVEG ++ R + D +G+ K E+ I R
Sbjct: 63 NLADVAERYLRKGSSVYVEGALQTRKWTDQ-SGQEKYTTEVVIGR 106
>gi|386389597|ref|ZP_10074411.1| single-stranded DNA-binding protein [Haemophilus
paraphrohaemolyticus HK411]
gi|385695367|gb|EIG25929.1| single-stranded DNA-binding protein [Haemophilus
paraphrohaemolyticus HK411]
Length = 179
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EATEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|347761666|ref|YP_004869227.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
gi|347580636|dbj|BAK84857.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
Length = 189
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + L K VY+EG ++ R + D +G+ + E+ + R
Sbjct: 63 RLGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDR 106
>gi|154248236|ref|YP_001419194.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
gi|154162321|gb|ABS69537.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
Length = 180
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K +NG V SV T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGRDPEIKSFQNGGRVCNLSVATSENWRDKASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R Y +G EI +R
Sbjct: 63 NLAGVAERFLKKGSKVYIEGQLETRKYEK--DGRETYTTEIVLR 104
>gi|260751953|ref|YP_003232491.1| putative Ssb protein [Escherichia coli O26:H11 str. 11368]
gi|257757316|dbj|BAI28816.1| putative Ssb protein [Escherichia coli O26:H11 str. 11368]
Length = 182
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D+ NG + I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKNTGT 109
>gi|146329431|ref|YP_001209671.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
gi|146232901|gb|ABQ13879.1| single-strand binding protein [Dichelobacter nodosus VCS1703A]
Length = 151
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K I+ G V P +++ NG+ V FS+ T ++ R G K + +WHR +
Sbjct: 3 GINKVILIGNVGKDPDMRVMTNGEQVANFSLATSMSWNDRQSGEK--REKTEWHRCVAYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
EI+G Y + K S +Y+EG +E R + D
Sbjct: 61 RIAEIIGQY----VRKGSKLYIEGRLETRKWQD 89
>gi|441503356|ref|ZP_20985362.1| Single-stranded DNA-binding protein [Photobacterium sp. AK15]
gi|441428854|gb|ELR66310.1| Single-stranded DNA-binding protein [Photobacterium sp. AK15]
Length = 181
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V +V T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGNDPEIRYMPNGGAVANITVATSESWRDKATGEQR--EKTEWHRVAIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRFTTEVVVQ 105
>gi|113461865|ref|YP_719934.1| single-stranded DNA binding protein [Haemophilus somnus 129PT]
gi|112823908|gb|ABI25997.1| single-strand binding protein [Haemophilus somnus 129PT]
Length = 149
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + P + + NG+ V+ SV T + + G K + +WHRI +
Sbjct: 3 GINKVIIVGNLGADPEVRTMPNGEAVSNISVATSESWTDKTTGEKR--ELTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI+G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEIVGEY----LRKGSKVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|149911019|ref|ZP_01899648.1| single-strand DNA-binding protein [Moritella sp. PE36]
gi|149805922|gb|EDM65908.1| single-strand DNA-binding protein [Moritella sp. PE36]
Length = 217
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II G + + P + NG V ++ T + + G + + +WHR+AV
Sbjct: 4 RGVNKVIILGNLGNDPEIRSFPNGGAVANLTIATSESWRDKQTGEQR--EKTEWHRVAVF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
EI G Y L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGALQTRKWQDQ-NGQDRYTTEVVVQ 105
>gi|452964785|gb|EME69819.1| single-stranded DNA-binding protein [Magnetospirillum sp. SO-1]
Length = 166
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T + R G+ + + +WHR+ + N
Sbjct: 5 VNKVILVGNLGRDPEVRTSQDGSKIVNLNIATSETWKDR--GTGERKEKTEWHRVVIFNP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K SSVY+EG ++ R + D +G+ K EI I R
Sbjct: 63 NLADVAERYLKKGSSVYIEGALQTRKWTDQ-SGQEKYTTEIVIGR 106
>gi|191173636|ref|ZP_03035161.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli F11]
gi|281427966|ref|YP_003352477.1| single-stranded DNA binding protein [Escherichia coli SE15]
gi|293404623|ref|ZP_06648616.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|386602563|ref|YP_006104071.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|422757393|ref|ZP_16811212.1| single-strand binding protein [Escherichia coli H263]
gi|422842042|ref|ZP_16890009.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|432351095|ref|ZP_19594413.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE2]
gi|432391323|ref|ZP_19634176.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE21]
gi|432424699|ref|ZP_19667223.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE181]
gi|432462094|ref|ZP_19704234.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE204]
gi|432464107|ref|ZP_19706221.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE205]
gi|432497974|ref|ZP_19739760.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|432517117|ref|ZP_19754316.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE228]
gi|432536460|ref|ZP_19773389.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE235]
gi|432572158|ref|ZP_19808651.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE55]
gi|432581514|ref|ZP_19817929.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE57]
gi|432585680|ref|ZP_19822059.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|432629661|ref|ZP_19865619.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE80]
gi|432639235|ref|ZP_19875086.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE83]
gi|432663494|ref|ZP_19899104.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE116]
gi|432692966|ref|ZP_19928184.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE162]
gi|432706775|ref|ZP_19941857.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE6]
gi|432712891|ref|ZP_19947935.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE8]
gi|432730291|ref|ZP_19965157.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE45]
gi|432734795|ref|ZP_19969611.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE42]
gi|432757954|ref|ZP_19992480.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE46]
gi|432818444|ref|ZP_20052166.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|432818450|ref|ZP_20052172.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|433002517|ref|ZP_20191027.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE227]
gi|433056068|ref|ZP_20243195.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE122]
gi|433070984|ref|ZP_20257710.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE128]
gi|433076077|ref|ZP_20262670.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE129]
gi|433109014|ref|ZP_20294912.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|433156776|ref|ZP_20341675.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE176]
gi|433160706|ref|ZP_20345525.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE177]
gi|433181389|ref|ZP_20365721.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE82]
gi|433201186|ref|ZP_20385041.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|433332273|ref|ZP_20404529.1| single-stranded DNA-binding protein [Escherichia coli J96]
gi|190906116|gb|EDV65730.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli F11]
gi|281181698|dbj|BAI58027.1| single-stranded DNA binding protein [Escherichia coli SE15]
gi|291428335|gb|EFF01361.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|307629832|gb|ADN74135.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|323954204|gb|EGB49993.1| single-strand binding protein [Escherichia coli H263]
gi|371602591|gb|EHN91282.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|430882225|gb|ELC05426.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE2]
gi|430921052|gb|ELC41909.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE21]
gi|430959509|gb|ELC77827.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE181]
gi|430987500|gb|ELD04037.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE204]
gi|430998070|gb|ELD14318.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE205]
gi|431034368|gb|ELD46307.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|431053178|gb|ELD62812.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE228]
gi|431073701|gb|ELD81342.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE235]
gi|431111608|gb|ELE15505.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE55]
gi|431122835|gb|ELE25591.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE57]
gi|431125590|gb|ELE27991.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|431175436|gb|ELE75445.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE80]
gi|431185887|gb|ELE85572.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE83]
gi|431206335|gb|ELF04748.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE116]
gi|431237718|gb|ELF32708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE162]
gi|431257059|gb|ELF49984.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE6]
gi|431258230|gb|ELF51012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE8]
gi|431279795|gb|ELF70743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE45]
gi|431290838|gb|ELF81368.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE42]
gi|431312580|gb|ELG00578.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE46]
gi|431373485|gb|ELG59089.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431373491|gb|ELG59095.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431522543|gb|ELH99777.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE227]
gi|431562761|gb|ELI36006.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE122]
gi|431576235|gb|ELI48930.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE128]
gi|431577737|gb|ELI50366.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE129]
gi|431618085|gb|ELI87066.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|431667219|gb|ELJ33810.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE176]
gi|431673981|gb|ELJ40167.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE177]
gi|431694983|gb|ELJ60322.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE82]
gi|431714122|gb|ELJ78322.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|432343935|gb|ELL38743.1| single-stranded DNA-binding protein [Escherichia coli J96]
Length = 175
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417153627|ref|ZP_11992246.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0497]
gi|417584246|ref|ZP_12235038.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_B2F1]
gi|345330814|gb|EGW63278.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_B2F1]
gi|386169147|gb|EIH35657.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0497]
Length = 177
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLCKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417839253|ref|ZP_12485446.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M19107]
gi|341953823|gb|EGT80319.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M19107]
Length = 168
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|342904981|ref|ZP_08726775.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M21621]
gi|373466903|ref|ZP_09558212.1| single-strand binding family protein [Haemophilus sp. oral taxon
851 str. F0397]
gi|341952080|gb|EGT78621.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M21621]
gi|371759667|gb|EHO48379.1| single-strand binding family protein [Haemophilus sp. oral taxon
851 str. F0397]
Length = 168
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|310816479|ref|YP_003964443.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|385234095|ref|YP_005795437.1| ssDNA-binding protein [Ketogulonicigenium vulgare WSH-001]
gi|308755214|gb|ADO43143.1| single-strand binding protein [Ketogulonicigenium vulgare Y25]
gi|343463006|gb|AEM41441.1| Single-stranded DNA-binding protein [Ketogulonicigenium vulgare
WSH-001]
Length = 155
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K + G + P + NG V ++ T + + G + + +WH++A+ N+
Sbjct: 5 VNKVFLIGNLGRDPEVRSFPNGGKVVNLNIATSETWRDKNTGER--KERTEWHKVAIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + A K L K S VY+EG +E R + D +G + EI +R
Sbjct: 63 GLANVAEKYLRKGSKVYIEGKLETRKWQDQ-SGTDRYTTEIALR 105
>gi|402773712|ref|YP_006593249.1| ssDNA-binding protein [Methylocystis sp. SC2]
gi|401775732|emb|CCJ08598.1| Single-stranded DNA-binding protein [Methylocystis sp. SC2]
Length = 167
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V FSV T + + G + +WH +++ NE
Sbjct: 5 VNKVILIGNLGRDPEVRTLPSGDRVVSFSVATTESWRDKNTGER--KDRTEWHNVSIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + K S +Y+EG ++ R Y D +G + ++ ++R
Sbjct: 63 NLGKIAEQYCRKGSKIYLEGQLQTREYTDK-DGNQRKATDVVLQR 106
>gi|418869436|ref|ZP_13423871.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|392836315|gb|EJA91900.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
Length = 167
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ V
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVVF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D NG + + EI ++ G
Sbjct: 62 GK-LAEIASEYLRKGAQVYIEGQLRTRSWDD--NGITRYVTEILVKTTGT 108
>gi|422832090|ref|ZP_16880214.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|371615693|gb|EHO04086.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
Length = 175
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D NG + I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGT 108
>gi|422378457|ref|ZP_16458669.1| single-strand binding family protein [Escherichia coli MS 60-1]
gi|324010281|gb|EGB79500.1| single-strand binding family protein [Escherichia coli MS 60-1]
Length = 175
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417843196|ref|ZP_12489273.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
gi|341950430|gb|EGT77019.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
Length = 167
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|419839562|ref|ZP_14362969.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
HK386]
gi|386909422|gb|EIJ74097.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
HK386]
Length = 168
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|294677342|ref|YP_003577957.1| single-stranded DNA-binding protein [Rhodobacter capsulatus SB
1003]
gi|294476162|gb|ADE85550.1| single-stranded DNA-binding protein-1 [Rhodobacter capsulatus SB
1003]
Length = 175
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + NG V + T + + G + + +WH +A+ NE
Sbjct: 5 VNKVILVGNLGRDPEVRTFANGGKVCNLRIATSETWRDKQSGERK--ERTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S+VY+EG +E R + D G+ + E+ +R
Sbjct: 63 PLAKIAEQYLRKGSTVYIEGQLETRKWTDQ-QGQERYTTEVVLR 105
>gi|197104857|ref|YP_002130234.1| single-strand binding protein [Phenylobacterium zucineum HLK1]
gi|196478277|gb|ACG77805.1| single-strand binding protein [Phenylobacterium zucineum HLK1]
Length = 160
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPEIRSLNSGDRVANLRIATSETWRDRSTGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A L K S+VY+EG ++ R + D +G+ K EI +++
Sbjct: 63 NLVKVAENYLRKGSTVYIEGSLQTRKWTDQ-SGQEKYSTEIVLQK 106
>gi|260426969|ref|ZP_05780948.1| single-stranded DNA-binding protein [Citreicella sp. SE45]
gi|260421461|gb|EEX14712.1| single-stranded DNA-binding protein [Citreicella sp. SE45]
Length = 184
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPEVRTFQNGGKVCNLRIATSENWKDRNTGER--RERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + EI +R
Sbjct: 63 PLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEIVLR 105
>gi|406708110|ref|YP_006758462.1| single stranded DNA-binding protein [alpha proteobacterium HIMB59]
gi|406653886|gb|AFS49285.1| single stranded DNA-binding protein [alpha proteobacterium HIMB59]
Length = 155
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + G + FS+ T + R ++ L +WHR+ V N+
Sbjct: 5 VNKVILLGNLGKDPDIRATSAGSRLASFSIATSTKY--RNKETQQLEDKTEWHRVVVFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L K L K S VYVEG ++ R + D+ NG K E+ I
Sbjct: 63 KLADVCEKYLRKGSKVYVEGQLQTRKWTDN-NGVDKYTTEVVI 104
>gi|425072893|ref|ZP_18475999.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
gi|404596667|gb|EKA97187.1| single-stranded DNA-binding protein [Proteus mirabilis WGLW4]
Length = 169
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K ++ G + P + L NG VT ++ T L+ + G + + V+WHR+ +
Sbjct: 4 KGVNKVLLIGHLGQDPEMRYLPNGDAVTNITLATSDLWKDKQSG--ETKERVEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D NG+ + E+ + +G
Sbjct: 62 GK-LAKIAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVNING 108
>gi|229846337|ref|ZP_04466445.1| single-strand DNA-binding protein [Haemophilus influenzae 7P49H1]
gi|229810430|gb|EEP46148.1| single-strand DNA-binding protein [Haemophilus influenzae 7P49H1]
Length = 168
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|417845977|ref|ZP_12491992.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M21639]
gi|341953684|gb|EGT80186.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M21639]
Length = 167
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|168759021|ref|ZP_02784028.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4401]
gi|168770718|ref|ZP_02795725.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4486]
gi|422335326|ref|ZP_16416326.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
gi|424572667|ref|ZP_18013164.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|425414295|ref|ZP_18796016.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|189354294|gb|EDU72713.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4401]
gi|189360447|gb|EDU78866.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O157:H7 str. EC4486]
gi|373243664|gb|EHP63165.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
gi|390889838|gb|EIP49544.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|408351898|gb|EKJ65582.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
Length = 175
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|338990619|ref|ZP_08634451.1| Single-strand binding protein [Acidiphilium sp. PM]
gi|338205430|gb|EGO93734.1| Single-strand binding protein [Acidiphilium sp. PM]
Length = 158
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + ++G + +V T ++ ++ G + + +WHR+ + N+
Sbjct: 1 MNKVILVGNLGRDPEMRTTQSGMKIVNLAVATSETWNDKMSGERQ--ERTEWHRVVIMND 58
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
L A + L K S +Y+EG ++ R + D +G+ K EI + R G
Sbjct: 59 RLADVAERFLKKGSKIYLEGKLQTRKWTDQ-SGQEKYTTEIMLGRIG 104
>gi|432556026|ref|ZP_19792740.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
gi|431080447|gb|ELD87246.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
Length = 154
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + L NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYLPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|386783246|pdb|3ULP|A Chain A, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783247|pdb|3ULP|B Chain B, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783248|pdb|3ULP|C Chain C, Plasmodium Falciparum Ssb Complex With Ssdna
gi|386783249|pdb|3ULP|D Chain D, Plasmodium Falciparum Ssb Complex With Ssdna
Length = 124
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+ ++K ++ G+V P KIL G V FS+ T + R + +L WHRI V+
Sbjct: 4 KSLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRIVVY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYN-DSINGEVKNIPEICI 186
++ + K L K VYV+G + R ++ + +N + K I EI +
Sbjct: 62 DQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIIL 107
>gi|37528177|ref|NP_931522.1| single-strand DNA-binding protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787614|emb|CAE16721.1| single-strand binding protein (SSB) (helix-destabilizing protein)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 178
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG VT ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTG--EMKEKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D NG+ + E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQERYTTEVVVNMGG 108
>gi|417843724|ref|ZP_12489792.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
gi|341948637|gb|EGT75257.1| single-stranded DNA-binding protein [Haemophilus haemolyticus
M21127]
Length = 154
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + ++NG TV FSV T + + +++ + +WHRI ++
Sbjct: 3 GINKVIIIGNLGNAPEIRAMQNGDTVANFSVATSESWVDK--NTQEKRENTEWHRIVLYR 60
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
L A + L K S VYVEG ++ R + D G+ + EI
Sbjct: 61 R-LADIAGQYLRKGSKVYVEGKLKTRQWQDE-KGQTHYVTEII 101
>gi|91206337|ref|YP_538691.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|218692910|ref|YP_002406022.1| single-stranded DNA-binding protein [Escherichia coli UMN026]
gi|422383460|ref|ZP_16463610.1| single-strand binding family protein [Escherichia coli MS 57-2]
gi|91075788|gb|ABE10668.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|218350073|emb|CAQ87490.1| Single-stranded DNA-binding protei [Escherichia coli UMN026]
gi|324005340|gb|EGB74559.1| single-strand binding family protein [Escherichia coli MS 57-2]
Length = 188
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|300900997|ref|ZP_07119119.1| single-strand binding family protein, partial [Escherichia coli MS
198-1]
gi|300355542|gb|EFJ71412.1| single-strand binding family protein [Escherichia coli MS 198-1]
Length = 193
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 22 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 79
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 80 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 126
>gi|145631076|ref|ZP_01786851.1| dihydrodipicolinate synthase [Haemophilus influenzae R3021]
gi|144983361|gb|EDJ90843.1| dihydrodipicolinate synthase [Haemophilus influenzae R3021]
Length = 167
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGER--REVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|453331705|dbj|GAC86619.1| single-strand DNA binding protein [Gluconobacter thailandicus NBRC
3255]
Length = 193
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + +V T ++ R G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKIVNLTVATSETWNDRQSGER--KERTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + L K VY+EG++ R + D +G+ + E+ I R
Sbjct: 63 RLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDR 106
>gi|417841265|ref|ZP_12487369.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M19501]
gi|341949303|gb|EGT75907.1| Single-stranded DNA-binding protein [Haemophilus haemolyticus
M19501]
Length = 164
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GVNKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|91204976|ref|YP_537331.1| single-stranded DNA-binding protein [Rickettsia bellii RML369-C]
gi|157827694|ref|YP_001496758.1| single-stranded DNA-binding protein [Rickettsia bellii OSU 85-389]
gi|123084592|sp|Q1RK72.1|SSB_RICBR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|91068520|gb|ABE04242.1| Single-stranded DNA-binding protein [Rickettsia bellii RML369-C]
gi|157802998|gb|ABV79721.1| single-strand DNA-binding protein [Rickettsia bellii OSU 85-389]
Length = 150
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G + P + GK + S+ T ++ R+ G K + +WHR+ + NE
Sbjct: 5 LNKVTLIGNLGRDPEIRTTGEGKEIANLSLATTDIWKDRVTGEK--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + K S +Y+EG ++ R +NDS +G K EI ++
Sbjct: 63 GLVSVVKNYVKKGSKLYIEGSLQTRKWNDS-SGVEKYTTEIVLQ 105
>gi|365857508|ref|ZP_09397497.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
gi|363715937|gb|EHL99354.1| single-strand binding family protein [Acetobacteraceae bacterium
AT-5844]
Length = 160
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K + G + P + +NG V + T + R + + +WH +A+ NE
Sbjct: 4 VNKVTLIGNLGRDPEVRSFQNGGRVVNLRIATTETYKDR---EGNRQEKTEWHSVAIFNE 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG A K L K S VY+EG +E R + D G+ + EI +R
Sbjct: 61 KLGEIAEKCLRKGSKVYLEGKLETRKWTDQ-QGQERYSTEIVLR 103
>gi|350532550|ref|ZP_08911491.1| single-stranded DNA-binding protein [Vibrio rotiferianus DAT722]
Length = 180
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+A+
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRYTTEVVVQ 105
>gi|145628571|ref|ZP_01784371.1| single-strand DNA-binding protein [Haemophilus influenzae 22.1-21]
gi|507347|gb|AAA60461.1| SSB [Haemophilus influenzae]
gi|144979041|gb|EDJ88727.1| single-strand DNA-binding protein [Haemophilus influenzae 22.1-21]
Length = 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|114764280|ref|ZP_01443508.1| single-strand binding protein [Pelagibaca bermudensis HTCC2601]
gi|114543228|gb|EAU46245.1| single-strand binding protein [Roseovarius sp. HTCC2601]
Length = 171
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPETRTFQNGGKVCNLRIATSENWKDRNTGERR--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLARIAEQYLRKGSKVYLEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|426400698|ref|YP_007019670.1| ssDNA-binding protein [Candidatus Endolissoclinum patella L2]
gi|425857366|gb|AFX98402.1| single-strand binding family protein [Candidatus Endolissoclinum
patella L2]
Length = 162
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++KAI+ G + P + ++G + ++ T + R S D + +WHR+ + NE
Sbjct: 5 INKAILIGNLGRDPEVRFTQDGIKIVNLAIATSDRW--RDKNSGDQRERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R ++D NG + +I ++R
Sbjct: 63 NLARLAEQYLRKGSLVYIEGQLQTRKWSDQ-NGHERYSTDIVLQR 106
>gi|134910|sp|P28045.2|SSBR_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 175
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R ++D NG + I EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGT 108
>gi|145635157|ref|ZP_01790862.1| single-strand DNA-binding protein [Haemophilus influenzae PittAA]
gi|145267578|gb|EDK07577.1| single-strand DNA-binding protein [Haemophilus influenzae PittAA]
Length = 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|148825471|ref|YP_001290224.1| single-stranded DNA-binding protein [Haemophilus influenzae PittEE]
gi|148715631|gb|ABQ97841.1| single-strand DNA-binding protein [Haemophilus influenzae PittEE]
Length = 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|133756485|ref|YP_001096441.1| single-strand binding protein [Escherichia coli]
gi|237702566|ref|ZP_04533047.1| single strand DNA binding protein [Escherichia sp. 3_2_53FAA]
gi|298378810|ref|ZP_06988692.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|312964349|ref|ZP_07778643.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|410593381|ref|YP_006953504.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609750|ref|YP_006953930.1| single-stranded DNA-binding protein [Escherichia coli]
gi|419184106|ref|ZP_13727658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189576|ref|ZP_13733070.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|420133538|ref|ZP_14641759.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|422789326|ref|ZP_16842056.1| single-strand binding protein [Escherichia coli H489]
gi|423705354|ref|ZP_17679773.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|425189699|ref|ZP_18586935.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|429339530|ref|YP_006990741.1| single-stranded DNA-binding protein [Escherichia coli]
gi|432455052|ref|ZP_19697259.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE201]
gi|432492986|ref|ZP_19734817.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE214]
gi|432541544|ref|ZP_19778407.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE236]
gi|432547589|ref|ZP_19784378.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE237]
gi|432978801|ref|ZP_20167617.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE209]
gi|432993047|ref|ZP_20181678.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE218]
gi|433061128|ref|ZP_20248112.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE124]
gi|433090275|ref|ZP_20276602.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE137]
gi|433118374|ref|ZP_20304135.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE153]
gi|444928181|ref|ZP_21247398.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|451770718|ref|YP_007447530.1| single-stranded DNA-binding protein [Escherichia coli]
gi|89033310|gb|ABD59988.1| single-strand binding protein [Escherichia coli]
gi|226903347|gb|EEH89606.1| single strand DNA binding protein [Escherichia sp. 3_2_53FAA]
gi|298280419|gb|EFI21922.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|312290826|gb|EFR18702.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|323958995|gb|EGB54666.1| single-strand binding protein [Escherichia coli H489]
gi|359359327|gb|AEV41191.1| single-stranded DNA-binding protein [Escherichia coli]
gi|378019474|gb|EHV82304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378021978|gb|EHV84669.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|385704131|gb|EIG41213.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|386118422|gb|AFI99210.1| single-stranded DNA-binding protein [Escherichia coli]
gi|394425238|gb|EJE98236.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|408099988|gb|EKH32565.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|410832562|gb|AFV92799.1| single-stranded DNA-binding protein [Escherichia coli]
gi|430985769|gb|ELD02353.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE201]
gi|431031141|gb|ELD44041.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE214]
gi|431078562|gb|ELD85612.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE236]
gi|431084327|gb|ELD90491.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE237]
gi|431478555|gb|ELH58301.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE209]
gi|431514838|gb|ELH92678.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE218]
gi|431562205|gb|ELI35526.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE124]
gi|431596701|gb|ELI66648.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE137]
gi|431627649|gb|ELI96043.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE153]
gi|444534878|gb|ELV15061.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|449535700|gb|AGE98070.1| single-stranded DNA-binding protein [Escherichia coli]
Length = 175
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|387771872|ref|ZP_10128029.1| single-stranded DNA-binding protein [Haemophilus parahaemolyticus
HK385]
gi|386908257|gb|EIJ72955.1| single-stranded DNA-binding protein [Haemophilus parahaemolyticus
HK385]
Length = 181
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V SV T + + G + + +WHRI ++
Sbjct: 3 GVNKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVLYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|148827387|ref|YP_001292140.1| single-stranded DNA-binding protein [Haemophilus influenzae PittGG]
gi|148718629|gb|ABQ99756.1| single-strand DNA-binding protein [Haemophilus influenzae PittGG]
Length = 168
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGER--REVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|9507481|ref|NP_052488.1| single-stranded DNA binding protein [Shigella sonnei]
gi|32470197|ref|NP_863421.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|194447180|ref|YP_002043888.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|300907627|ref|ZP_07125257.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|301307185|ref|ZP_07213210.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|410651579|ref|YP_006954701.1| single-stranded DNA-binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|410654715|ref|YP_006954602.1| single-stranded DNA binding protein [Salmonella enterica]
gi|415867803|ref|ZP_11539615.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|418818975|ref|ZP_13374438.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|422034292|ref|ZP_16380318.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|422962938|ref|ZP_16973033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|450202549|ref|ZP_21893471.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|134906|sp|P18022.3|SSBP_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
gi|144656|gb|AAA98056.1| single-stranded DNA-binding protein [Plasmid ColIb-P9]
gi|4512478|dbj|BAA75127.1| single-stranded DNA binding protein [Shigella sonnei]
gi|4688844|emb|CAB41502.1| SSB protein [Escherichia coli]
gi|20521565|dbj|BAB91629.1| single strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|70610212|gb|AAZ05359.1| single-stranded DNA binding protein [Salmonella enterica]
gi|194405484|gb|ACF65705.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|300400651|gb|EFJ84189.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|300837616|gb|EFK65376.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|315252769|gb|EFU32737.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|321271609|gb|ADW79697.1| single-stranded DNA-binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|371591843|gb|EHN80777.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|392784334|gb|EJA40936.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|414010289|gb|EKS94314.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|449312243|gb|EMD02511.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R ++D NG + I EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGT 108
>gi|349688120|ref|ZP_08899262.1| single-strand DNA-binding protein Ssb [Gluconacetobacter oboediens
174Bp2]
gi|349688339|ref|ZP_08899481.1| single-strand DNA-binding protein Ssb [Gluconacetobacter oboediens
174Bp2]
Length = 156
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 84 VHKAIICGKVKDTPVQKILRNGK-TVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
V++AII G + P R G+ + F V T + R G + + QWHR+ N
Sbjct: 5 VNRAIIIGHLGRDPDLAARREGEGKIASFGVATSETWTDRASGER--REKTQWHRVVSFN 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR-DGN 191
+ L + ++ K + VYVEG +E R + D G+ + + EI I R DGN
Sbjct: 63 DHLSAVIERRCQKGTLVYVEGHLETRKWTDQ-QGQDRYVTEIIIDRFDGN 111
>gi|145637152|ref|ZP_01792814.1| dihydrodipicolinate synthase [Haemophilus influenzae PittHH]
gi|145269597|gb|EDK09538.1| dihydrodipicolinate synthase [Haemophilus influenzae PittHH]
Length = 173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|188581452|ref|YP_001924897.1| single-strand binding protein [Methylobacterium populi BJ001]
gi|179344950|gb|ACB80362.1| single-strand binding protein [Methylobacterium populi BJ001]
Length = 183
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + ++ G + + +WH + ++NE
Sbjct: 5 VNKVILVGNLGRDPETRRLASGDPVVNLRIATSESWKDKMSGER--KEKTEWHSVVIYNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R + D +G K E+ ++R
Sbjct: 63 NLARVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQR 106
>gi|145639839|ref|ZP_01795440.1| dihydrodipicolinate synthase [Haemophilus influenzae PittII]
gi|145271057|gb|EDK10973.1| dihydrodipicolinate synthase [Haemophilus influenzae PittII]
gi|309750334|gb|ADO80318.1| Single-stranded DNA-binding protein [Haemophilus influenzae R2866]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGER--REVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|16272208|ref|NP_438419.1| single-stranded DNA-binding protein [Haemophilus influenzae Rd
KW20]
gi|260580867|ref|ZP_05848692.1| single-strand binding protein [Haemophilus influenzae RdAW]
gi|1174443|sp|P44409.1|SSB_HAEIN RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|1573216|gb|AAC21916.1| single-stranded DNA binding protein (ssb) [Haemophilus influenzae
Rd KW20]
gi|260092490|gb|EEW76428.1| single-strand binding protein [Haemophilus influenzae RdAW]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGER--REVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|372267942|ref|ZP_09503990.1| single-stranded DNA-binding protein [Alteromonas sp. S89]
Length = 195
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G VT +V T + + G + + +WHR+
Sbjct: 4 RGVNKVILVGNLGGDPETRYMPSGGAVTNVTVATSETWKDKQSGQQQ--ERTEWHRVVFF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N EI G Y L K S VY+EG + R + D +G+ + EI
Sbjct: 62 NRLAEIAGEY----LRKGSKVYLEGSLRTRKWQDKNSGQDRYTTEIV 104
>gi|145640173|ref|ZP_01795757.1| single-strand DNA-binding protein [Haemophilus influenzae R3021]
gi|229844952|ref|ZP_04465089.1| single-strand DNA-binding protein [Haemophilus influenzae 6P18H1]
gi|145274759|gb|EDK14621.1| single-strand DNA-binding protein [Haemophilus influenzae 22.4-21]
gi|229812086|gb|EEP47778.1| single-strand DNA-binding protein [Haemophilus influenzae 6P18H1]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|323138614|ref|ZP_08073681.1| single-strand binding protein [Methylocystis sp. ATCC 49242]
gi|322396102|gb|EFX98636.1| single-strand binding protein [Methylocystis sp. ATCC 49242]
Length = 171
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +G V FS+ T + + G + +WH + + NE
Sbjct: 5 VNKVILVGNLGRDPEVRTFPSGDRVVSFSLATTESWRDKATGERK--DRTEWHNVQIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + K + +Y+EG ++ R Y D +G + + E+ + R
Sbjct: 63 ALGKIAEQYCRKGAKIYLEGQLQTREYTDK-DGNQRKVTEVVVPR 106
>gi|260582866|ref|ZP_05850651.1| single-strand binding protein [Haemophilus influenzae NT127]
gi|260094079|gb|EEW77982.1| single-strand binding protein [Haemophilus influenzae NT127]
Length = 171
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 7 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 64
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 65 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 104
>gi|189501116|ref|YP_001960586.1| single-strand binding protein [Chlorobium phaeobacteroides BS1]
gi|189496557|gb|ACE05105.1| single-strand binding protein [Chlorobium phaeobacteroides BS1]
Length = 157
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++KA++ G + P ++ +G++V F++ T F +L + +WHRI
Sbjct: 3 RGLNKAMLIGHLGTDPEMRVTPSGQSVVNFTLATNESFKD---SGGNLQERTEWHRIVAW 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ L + L K VYVEG ++ R + D+ GE K EI
Sbjct: 60 GK-LAEICNQYLKKGRQVYVEGRLQTRSWEDNKTGEKKYTTEI 101
>gi|410652456|ref|YP_006955738.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|410654228|ref|YP_006957806.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|425221460|ref|ZP_18616377.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|432725481|ref|ZP_19960390.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE17]
gi|432969395|ref|ZP_20158304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE203]
gi|365819286|gb|AEX01075.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|407809955|gb|AFU34764.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|408155920|gb|EKH84160.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|431261448|gb|ELF53484.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE17]
gi|431467430|gb|ELH47439.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE203]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLCKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|159044155|ref|YP_001532949.1| single stranded DNA-binding protein [Dinoroseobacter shibae DFL 12]
gi|157911915|gb|ABV93348.1| single stranded DNA-binding protein [Dinoroseobacter shibae DFL 12]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGER--REKTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLARVAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|73853254|ref|YP_308750.1| single-stranded DNA-binding protein [Escherichia coli]
gi|417265460|ref|ZP_12052831.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.3884]
gi|73476838|gb|AAZ76453.1| Single-stranded DNA binding protein [Escherichia coli]
gi|386232513|gb|EII59858.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.3884]
Length = 177
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIVVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|32491249|ref|NP_871503.1| hypothetical protein WGLp500 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166456|dbj|BAC24646.1| ssb [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 167
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG +T S+ T + + G + + +WHR+ +
Sbjct: 8 RGINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTG--ESKEKTEWHRVILF 65
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG+++ R + D NG+ + I EI + +G
Sbjct: 66 GK-LAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGING 112
>gi|319896585|ref|YP_004134778.1| single-stranded DNA-binding protein [Haemophilus influenzae F3031]
gi|386265370|ref|YP_005828862.1| ssDNA-binding protein [Haemophilus influenzae R2846]
gi|309972606|gb|ADO95807.1| Single-stranded DNA-binding protein [Haemophilus influenzae R2846]
gi|317432087|emb|CBY80438.1| Single-stranded DNA-binding protein [Haemophilus influenzae F3031]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|319775879|ref|YP_004138367.1| single-stranded DNA-binding protein [Haemophilus influenzae F3047]
gi|329123724|ref|ZP_08252284.1| single-stranded DNA-binding protein [Haemophilus aegyptius ATCC
11116]
gi|317450470|emb|CBY86686.1| Single-stranded DNA-binding protein [Haemophilus influenzae F3047]
gi|327469923|gb|EGF15388.1| single-stranded DNA-binding protein [Haemophilus aegyptius ATCC
11116]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|253991380|ref|YP_003042736.1| single-stranded dna-binding protein [Photorhabdus asymbiotica]
gi|253782830|emb|CAQ85995.1| single-stranded dna-binding protein [Photorhabdus asymbiotica]
Length = 177
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG VT ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTG--EMKEKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG ++ R + D NG+ + E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-NGQDRYTTEVVVNMGGT 109
>gi|432619989|ref|ZP_19856052.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE75]
gi|431145748|gb|ELE47357.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE75]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|378696382|ref|YP_005178340.1| ssDNA-binding protein [Haemophilus influenzae 10810]
gi|301168904|emb|CBW28498.1| Single-stranded DNA-binding protein [Haemophilus influenzae 10810]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGER--REVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|417637202|ref|ZP_12287395.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|345380973|gb|EGX12864.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
Length = 176
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R ++D+ NG + I EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWDDN-NGITRYITEILVKTTGT 109
>gi|416150303|ref|ZP_11603290.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
gi|333364010|gb|EGK46024.1| single-stranded DNA-binding protein [Acinetobacter baumannii AB210]
Length = 109
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 89 ICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSY 148
+ G + P+ K +NG + FS+ T + + G D + +WHRI HN LG
Sbjct: 1 MVGVLGANPIPKQFQNGGSYAQFSIATSEKYQDKRTG--DWIENTEWHRIVAHNR-LGEI 57
Query: 149 AVKQLVKNSSVYVEGDIEIRVYNDSIN 175
A + L K S VY+EG + R + D N
Sbjct: 58 ACQFLKKGSKVYIEGSLHTRKWTDQNN 84
>gi|374619089|ref|ZP_09691623.1| single stranded DNA-binding protein [gamma proteobacterium HIMB55]
gi|374302316|gb|EHQ56500.1| single stranded DNA-binding protein [gamma proteobacterium HIMB55]
Length = 157
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P ++L +G VT S+ T + + G + + +WHR+
Sbjct: 4 RGINKVILVGNLGQEPEHRVLPSGGGVTNISIATSESWKDKNTGQ--MQERTEWHRVVFF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N L A + L K S VYVEG + R + D
Sbjct: 62 NR-LAEIASEYLRKGSKVYVEGSLRTRKWQD 91
>gi|145632493|ref|ZP_01788227.1| single-strand DNA-binding protein [Haemophilus influenzae 3655]
gi|144986688|gb|EDJ93240.1| single-strand DNA-binding protein [Haemophilus influenzae 3655]
Length = 173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|68248857|ref|YP_247969.1| single-stranded DNA-binding protein [Haemophilus influenzae
86-028NP]
gi|68057056|gb|AAX87309.1| Single-strand binding protein [Haemophilus influenzae 86-028NP]
Length = 168
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG V SV T ++ R G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYATEI 100
>gi|347822710|ref|YP_004869756.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
gi|347662528|dbj|BAK85983.1| single-strand DNA-binding protein Ssb [Gluconacetobacter xylinus
NBRC 3288]
Length = 156
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 84 VHKAIICGKVKDTPVQKILRNGK-TVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
V++AII G + P R G+ + F V T + R G + + QWHR+ N
Sbjct: 5 VNRAIIIGHLGRDPDLAARREGEGKIASFGVATSETWTDRASGER--REKTQWHRVVSFN 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR-DGN 191
+ L + ++ K + VYVEG +E R + D G+ + + EI I R DGN
Sbjct: 63 DHLSAVIERRCQKGTLVYVEGHLETRKWTDQ-QGQDRYVTEIIIDRFDGN 111
>gi|422784247|ref|ZP_16837029.1| single-strand binding protein [Escherichia coli TW10509]
gi|323974708|gb|EGB69823.1| single-strand binding protein [Escherichia coli TW10509]
Length = 173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|422784350|ref|ZP_16837131.1| single-strand binding protein [Escherichia coli TW10509]
gi|423007565|ref|ZP_16998306.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 04-8351]
gi|323974535|gb|EGB69660.1| single-strand binding protein [Escherichia coli TW10509]
gi|354856180|gb|EHF16645.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 04-8351]
Length = 175
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D NG + I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGT 108
>gi|194337561|ref|YP_002019355.1| single-strand binding protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310038|gb|ACF44738.1| single-strand binding protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 158
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+G++K ++ G + + P K+ +G++ F++ T F + +L + +WHRI V
Sbjct: 3 KGLNKVMLIGHLGNDPEMKVTTSGQSRVTFTLATNENFKD---NNGNLQERTEWHRIVVW 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ L + L K VYVEG ++ R ++D NGE + EI
Sbjct: 60 AK-LAEICSQYLKKGRQVYVEGRLQTRSWDDPKNGEKRYTTEI 101
>gi|419902990|ref|ZP_14422131.1| single-stranded DNA-binding protein, partial [Escherichia coli
O26:H11 str. CVM9942]
gi|388372932|gb|EIL36306.1| single-stranded DNA-binding protein, partial [Escherichia coli
O26:H11 str. CVM9942]
Length = 144
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 80 GFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIA 139
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+
Sbjct: 2 AVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVV 59
Query: 140 VHN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 60 LFGKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|193214794|ref|YP_001995993.1| single-strand binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088271|gb|ACF13546.1| single-strand binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 174
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G + P ++ NG +V FS+ T F + + + +WHRI V
Sbjct: 3 RGLNKVMLIGNLGTDPDLRVTPNGHSVANFSLATNESFKD---STGEFRERTEWHRIVVW 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ L + + L K VY+EG ++ R ++D +GE + + EI
Sbjct: 60 GK-LADISKQYLRKGKQVYIEGKLQTRSWDDQKSGEKRYMTEI 101
>gi|349699617|ref|ZP_08901246.1| single-strand DNA-binding protein Ssb [Gluconacetobacter europaeus
LMG 18494]
Length = 179
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
+G A + L K VY+EG ++ R + D +G+ + E+ + R
Sbjct: 63 RIGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDR 106
>gi|145641709|ref|ZP_01797285.1| single-strand DNA-binding protein [Haemophilus influenzae R3021]
gi|145273523|gb|EDK13393.1| single-strand DNA-binding protein [Haemophilus influenzae 22.4-21]
Length = 146
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G K +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRTMPNGEQVANISVATSESWTDKNSGEKKT--QTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGQY----LQKGSQVYIEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|41056962|ref|NP_957582.1| single-stranded DNA-binding protein [Escherichia coli]
gi|219586069|ref|YP_002456163.1| single-stranded DNA-binding protein [Escherichia coli]
gi|256367678|ref|YP_003108247.1| single-strand binding protein [Escherichia coli]
gi|410610048|ref|YP_006954254.1| Ssb [Escherichia coli]
gi|410683162|ref|YP_006940232.1| single-stranded DNA binding protein ssb [Escherichia coli F18+]
gi|452909621|ref|NP_052922.3| single strand DNA binding protein [Shigella flexneri 2b]
gi|5103190|dbj|BAA78826.1| single strand DNA binding protein [Shigella flexneri 2b]
gi|38606099|gb|AAR25063.1| ssb [Escherichia coli]
gi|218931652|gb|ACL12425.1| single-strand binding protein [Escherichia coli]
gi|228480615|gb|ACQ41943.1| single-strand binding protein [Escherichia coli]
gi|356598389|gb|AET14904.1| single-stranded DNA binding protein ssb [Escherichia coli F18+]
gi|391324382|gb|AFM38928.1| Ssb [Escherichia coli]
Length = 188
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|296447169|ref|ZP_06889100.1| single-strand binding protein [Methylosinus trichosporium OB3b]
gi|296255334|gb|EFH02430.1| single-strand binding protein [Methylosinus trichosporium OB3b]
Length = 178
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V FSV T + R G + + +WH +++ NE
Sbjct: 5 VNKVILVGNLGRDPEVRTLPSGDRVVSFSVATSESWRDRNTGER--RERTEWHNVSIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + K S +Y+EG ++ R Y D
Sbjct: 63 NLAKIAEQYCRKGSKIYLEGQLQTREYQD 91
>gi|410944285|ref|ZP_11376026.1| single-strand DNA binding protein [Gluconobacter frateurii NBRC
101659]
Length = 188
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T ++ R G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGSKIVNLTIATSETWNDRQSGER--KERTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + L K VY+EG++ R + D +G+ + E+ I R
Sbjct: 63 RLGDVAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDR 106
>gi|261495694|ref|ZP_05992139.1| single-stranded DNA binding protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308649|gb|EEY09907.1| single-stranded DNA binding protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 150
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T ++ + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWNDKNTGERR--ELTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVCGQY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|349702378|ref|ZP_08904007.1| single-strand DNA-binding protein Ssb [Gluconacetobacter europaeus
LMG 18494]
Length = 156
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 84 VHKAIICGKVKDTPVQKILRNGK-TVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
V++AII G + P R G+ + F V T + R G + + QWHR+ N
Sbjct: 5 VNRAIIIGHLGRDPDLAARREGEGKIASFGVATSETWTDRASGER--REKTQWHRVVSFN 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR-DGN 191
+ L + ++ K + VYVEG +E R + D G+ + + EI I R DGN
Sbjct: 63 DHLSAVIERRCQKGTLVYVEGHLETRKWTDQ-QGQDRYVTEIIIDRFDGN 111
>gi|319408860|emb|CBI82517.1| Single-stranded DNA-binding protein [Bartonella schoenbuchensis R1]
Length = 144
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P K + +G V F + T + + G K + +WH I V N
Sbjct: 2 INKVILVGNLGANPESKTMASGTEVVNFRIATSQSYKDKTTGEK--VEKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K S VYVEG ++ R + D +G+ EI +
Sbjct: 60 HLVKVALQYLSKGSKVYVEGQLQTRKWQDK-SGQTHYTTEIIL 101
>gi|124506097|ref|XP_001351646.1| single-strand binding protein, putative [Plasmodium falciparum 3D7]
gi|23504574|emb|CAD51453.1| single-strand binding protein, putative [Plasmodium falciparum 3D7]
Length = 284
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+ ++K ++ G+V P KIL G V FS+ T + R + +L WHRI V+
Sbjct: 80 KSLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRIVVY 137
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYN-DSINGEVKNIPEICI 186
++ + K L K VYV+G + R ++ + +N + K I EI +
Sbjct: 138 DQNIVDLIDKYLRKGRRVYVQGSLHTRKWHTNDMNSQPKQITEIIL 183
>gi|349686620|ref|ZP_08897762.1| single-strand DNA-binding protein Ssb [Gluconacetobacter oboediens
174Bp2]
Length = 185
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGAKIVSLTLATSDTWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
+G A + L K VY+EG ++ R + D +G+ + E+ + R
Sbjct: 63 RIGDVAERFLRKGRKVYLEGSLQTRKWTDQ-SGQDRYTTEVVVDR 106
>gi|319408089|emb|CBI81742.1| Single-stranded DNA-binding protein [Bartonella schoenbuchensis R1]
Length = 148
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + + +G V F + T + + G K + +WH I V N
Sbjct: 2 INKVILVGNLGADPESRTMTSGAEVVNFRIATSQSYTDKTTGEK--VEKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K S VYVEG ++ R + D +G+ EI +
Sbjct: 60 HLAKVALQYLGKGSKVYVEGQLQTRKWQDK-SGQTHYTTEIIL 101
>gi|300724293|ref|YP_003713611.1| single-stranded DNA-binding protein [Xenorhabdus nematophila ATCC
19061]
gi|297630828|emb|CBJ91497.1| single-stranded DNA-binding protein [Xenorhabdus nematophila ATCC
19061]
Length = 170
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + L G TVT S+ T + + G +L + +WHR+ +
Sbjct: 4 RGINKVILVGYLGQDPEIRYLPTGGTVTTLSLATSENWKDKQTG--ELREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG ++ R + D+ G+ + E+ + +G+
Sbjct: 62 GK-LAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGS 109
>gi|37999428|sp|Q8D254.2|SSB_WIGBR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
Length = 163
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG +T S+ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTG--ESKEKTEWHRVILF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG+++ R + D NG+ + I EI + +G
Sbjct: 62 GK-LAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGING 108
>gi|194430472|ref|ZP_03062950.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B171]
gi|194411483|gb|EDX27827.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B171]
Length = 175
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D NG + I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGT 108
>gi|304391778|ref|ZP_07373720.1| single-stranded DNA-binding protein [Ahrensia sp. R2A130]
gi|303296007|gb|EFL90365.1| single-stranded DNA-binding protein [Ahrensia sp. R2A130]
Length = 171
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++GK + FS+ T + R G + + +WHRIA NE
Sbjct: 5 VNKVILVGNLGRDPEIRRTQDGKAIANFSIATSETWRDRNSGER--REKTEWHRIACFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + + K S VY+EG ++ R + D+ G K EI ++
Sbjct: 63 GLNKVIEQYVKKGSKVYIEGQLQTRKWTDNA-GVEKYTTEIVLQ 105
>gi|110679808|ref|YP_682815.1| single-strand binding protein [Roseobacter denitrificans OCh 114]
gi|109455924|gb|ABG32129.1| single-strand binding protein [Roseobacter denitrificans OCh 114]
Length = 166
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGERK--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLARVAEQYLRKGSKVYLEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|424497190|ref|ZP_17944614.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390818432|gb|EIO84813.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
Length = 175
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417842883|ref|ZP_12488963.1| single-strand binding protein [Haemophilus haemolyticus M21127]
gi|341951044|gb|EGT77625.1| single-strand binding protein [Haemophilus haemolyticus M21127]
Length = 146
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G K +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRTMPNGEQVANISVATSESWTDKNSGEKKT--QTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG ++ R + D+ NG+ + EI
Sbjct: 61 RQAEICGQY----LQKGSQVYIEGRLKTRKWQDN-NGQDRYTTEI 100
>gi|84500811|ref|ZP_00999046.1| single-strand binding protein [Oceanicola batsensis HTCC2597]
gi|84390878|gb|EAQ03296.1| single-strand binding protein [Oceanicola batsensis HTCC2597]
Length = 166
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVIIVGNLGRDPEVRSFQNGGKVCNLRIATSENWKDRNTGER--RERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|301048746|ref|ZP_07195753.1| single-strand binding family protein, partial [Escherichia coli MS
185-1]
gi|300299424|gb|EFJ55809.1| single-strand binding family protein [Escherichia coli MS 185-1]
Length = 199
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 28 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 85
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 86 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTG 131
>gi|157149468|ref|YP_001451472.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|418825948|ref|ZP_13381204.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|422820209|ref|ZP_16868418.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|422831593|ref|ZP_16879733.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|432444050|ref|ZP_19686367.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|432743835|ref|ZP_19978546.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE23]
gi|157076635|gb|ABV16346.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|371601508|gb|EHN90248.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B093]
gi|385536256|gb|EIF83159.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|392810164|gb|EJA66185.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|430977641|gb|ELC94469.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|431280267|gb|ELF71188.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE23]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|312883207|ref|ZP_07742936.1| single-stranded DNA-binding protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369130|gb|EFP96653.1| single-stranded DNA-binding protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 174
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG V ++ T + + G + + +WHR+A+
Sbjct: 4 RGINKVILVGNLGSDPEVRYMPNGGAVANITLATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRYTTEVVVQ 105
>gi|345428933|ref|YP_004822049.1| Single-stranded DNA-binding protein [Haemophilus parainfluenzae
T3T1]
gi|301154992|emb|CBW14455.1| Single-stranded DNA-binding protein [Haemophilus parainfluenzae
T3T1]
Length = 155
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI ++
Sbjct: 3 GINKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVLYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D+ NG+ + EI
Sbjct: 61 RLAEIAGQY----LRKGSQVYVEGRLKTRKWQDN-NGQDRYTTEI 100
>gi|227553|prf||1706408A ssDNA binding protein
Length = 174
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 3 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R ++D NG + I EI ++ G
Sbjct: 61 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGT 107
>gi|416051102|ref|ZP_11577247.1| single strand binding protein [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347993406|gb|EGY34770.1| single strand binding protein [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 145
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G++ + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GVNKVIIVGRLGNEPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VY+EG ++ R + D NG+ + EI
Sbjct: 61 RQAEVCGEY----LHKGSQVYIEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|386611932|ref|YP_006136976.1| ssDNA-binding protein [Escherichia coli UMNK88]
gi|410496121|ref|YP_006903429.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|450236559|ref|ZP_21898614.1| single-stranded DNA-binding protein [Escherichia coli O08]
gi|321271509|gb|ADW79598.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|332346568|gb|AEE59900.1| single-stranded DNA-binding protein Ssb [Escherichia coli UMNK88]
gi|449311118|gb|EMD01519.1| single-stranded DNA-binding protein [Escherichia coli O08]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKVAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|194447081|ref|YP_002039094.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|422372658|ref|ZP_16453011.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|425135170|ref|ZP_18535972.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|432847568|ref|ZP_20079806.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE141]
gi|194358525|gb|ACF56969.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|315295576|gb|EFU54900.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|408575693|gb|EKK51345.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|431391340|gb|ELG74987.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE141]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|254361547|ref|ZP_04977685.1| single-stranded DNA-binding protein [Mannheimia haemolytica PHL213]
gi|153093065|gb|EDN74081.1| single-stranded DNA-binding protein [Mannheimia haemolytica PHL213]
Length = 147
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T ++ + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWNDKNTGER--RELTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VY+EG + R + D NG+ + EI
Sbjct: 61 RQAEVCGQY----LRKGSKVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|419802892|ref|ZP_14328072.1| single-stranded DNA-binding protein [Haemophilus parainfluenzae
HK262]
gi|385189132|gb|EIF36601.1| single-stranded DNA-binding protein [Haemophilus parainfluenzae
HK262]
Length = 155
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI ++
Sbjct: 3 GINKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVLYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D+ NG+ + EI
Sbjct: 61 RLAEIAGQY----LRKGSQVYVEGRLKTRKWQDN-NGQDRYTTEI 100
>gi|419292887|ref|ZP_13834955.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|419804840|ref|ZP_14329990.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AI27]
gi|378148714|gb|EHX09850.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|384472119|gb|EIE56180.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AI27]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|379009508|ref|YP_005267321.1| ssDNA-binding protein [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
gi|375158032|gb|AFA41098.1| ssDNA-binding protein [Wigglesworthia glossinidia endosymbiont of
Glossina morsitans morsitans (Yale colony)]
Length = 169
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG V ++ T + + G ++ + +WHRI +
Sbjct: 4 RGINKVILIGYLGQNPDIRYIPNGNAVANITLATSENWRDKNTG--EIKEKTEWHRIVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S VY+EG ++ R + D NG+ K I EI + +G
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGSLQTRKWQDQ-NGQDKYITEIVVGING 108
>gi|347447803|pdb|3TQY|A Chain A, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447804|pdb|3TQY|B Chain B, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447805|pdb|3TQY|C Chain C, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
gi|347447806|pdb|3TQY|D Chain D, Structure Of A Single-Stranded Dna-Binding Protein (Ssb),
From Coxiella Burnetii
Length = 158
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + NG V ++ T + + G +L + +WHRIA
Sbjct: 6 RGVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTG--ELQERTEWHRIAFF 63
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
N EI+G Y L K S +Y+EG + R + D NG + EI
Sbjct: 64 NRLAEIVGEY----LRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEI 104
>gi|422354674|ref|ZP_16435402.1| single-strand binding family protein, partial [Escherichia coli MS
117-3]
gi|324017360|gb|EGB86579.1| single-strand binding family protein [Escherichia coli MS 117-3]
Length = 177
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417225796|ref|ZP_12028965.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
gi|386198712|gb|EIH97704.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
Length = 375
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 202 RGINKVIVVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 259
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 260 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 306
>gi|325577237|ref|ZP_08147721.1| ssb protein [Haemophilus parainfluenzae ATCC 33392]
gi|325160819|gb|EGC72940.1| ssb protein [Haemophilus parainfluenzae ATCC 33392]
Length = 155
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI ++
Sbjct: 3 GINKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVLYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D+ NG+ + EI
Sbjct: 61 RLAEIAGQY----LRKGSQVYVEGRLKTRKWQDN-NGQDRYTTEI 100
>gi|307313329|ref|ZP_07592952.1| single-strand binding protein [Escherichia coli W]
gi|378715405|ref|YP_005280296.1| single-strand binding protein [Escherichia coli KO11FL]
gi|386611789|ref|YP_006127288.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|386707726|ref|YP_006176167.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|417637166|ref|ZP_12287361.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|418832123|ref|ZP_13387067.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|306906751|gb|EFN37261.1| single-strand binding protein [Escherichia coli W]
gi|315063706|gb|ADT78032.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|323380959|gb|ADX53226.1| single-strand binding protein [Escherichia coli KO11FL]
gi|345381115|gb|EGX13001.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_S1191]
gi|383394846|gb|AFH14381.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|392798011|gb|EJA54300.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|33152365|ref|NP_873718.1| single-stranded DNA-binding protein [Haemophilus ducreyi 35000HP]
gi|37999362|sp|P59930.1|SSB_HAEDU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|33148588|gb|AAP96107.1| single stranded DNA binding protein [Haemophilus ducreyi 35000HP]
Length = 176
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|419845124|ref|ZP_14368410.1| single-stranded DNA-binding protein [Haemophilus parainfluenzae
HK2019]
gi|386416455|gb|EIJ30952.1| single-stranded DNA-binding protein [Haemophilus parainfluenzae
HK2019]
Length = 155
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI ++
Sbjct: 3 GINKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVLYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG ++ R + D+ NG+ + EI
Sbjct: 61 RLAEIAGQY----LRKGSQVYVEGRLKTRKWQDN-NGQDRYTTEI 100
>gi|419882785|ref|ZP_14403976.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9545]
gi|388360529|gb|EIL24720.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9545]
Length = 215
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 44 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 101
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 102 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTG 147
>gi|303251367|ref|ZP_07337545.1| hypothetical protein APP6_0568 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252402|ref|ZP_07534298.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302649909|gb|EFL80087.1| hypothetical protein APP6_0568 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859994|gb|EFM92011.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 144
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNEPEMRTMPNGEAVANISVATSESWTDKTTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E++G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVVGQY----LHKGSQVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|121998963|ref|YP_001003750.1| ssDNA-binding protein [Halorhodospira halophila SL1]
gi|121590368|gb|ABM62948.1| single-strand binding protein [Halorhodospira halophila SL1]
Length = 160
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + +G V ++ T + R G + + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGRDPEVRYTASGSAVANVALATSDTWRDRQTGEQQ--ERTEWHRVVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N LG A + L K S VY+EG ++ R + D NG+ + EI
Sbjct: 62 NR-LGEIAGEYLRKGSKVYIEGRLQTRKWQDQ-NGQDRYTTEIV 103
>gi|420289744|ref|ZP_14791915.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|390803207|gb|EIO70226.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
Length = 175
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417594808|ref|ZP_12245487.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
gi|345364135|gb|EGW96269.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
Length = 150
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|432804197|ref|ZP_20038144.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE91]
gi|432921767|ref|ZP_20124852.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE173]
gi|432926003|ref|ZP_20127891.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE175]
gi|432930533|ref|ZP_20131017.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE184]
gi|433171727|ref|ZP_20356303.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE180]
gi|433193039|ref|ZP_20377049.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE90]
gi|431358096|gb|ELG44755.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE91]
gi|431437589|gb|ELH19098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE173]
gi|431447569|gb|ELH28299.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE175]
gi|431461954|gb|ELH42220.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE184]
gi|431680184|gb|ELJ46051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE180]
gi|431719511|gb|ELJ83566.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE90]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|356960519|ref|ZP_09063501.1| single-strand binding protein [gamma proteobacterium SCGC
AAA001-B15]
Length = 158
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K I+ G + P K NG ++ SV T + + G K + +WHR+++
Sbjct: 3 GINKVILVGNLGAKPEVKYASNGNAISNLSVATSESWTDKSTGQKQ--ERTEWHRVSLFG 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VYVEG ++ R + D NG+ + E+ +
Sbjct: 61 KLAEIAGQY----LDKGSKVYVEGKLQTRKWQDQ-NGQDRYTTEVVV 102
>gi|261493792|ref|ZP_05990307.1| single-strand DNA-binding protein [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261494274|ref|ZP_05990772.1| single-strand DNA-binding protein [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261310085|gb|EEY11290.1| single-strand DNA-binding protein [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261310573|gb|EEY11761.1| single-strand DNA-binding protein [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 191
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 23 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 80
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 81 RQAEVCGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 120
>gi|256855323|ref|YP_003162567.1| single-stranded binding protein Ssb [Escherichia coli]
gi|256275535|gb|ACU68808.1| single-stranded binding protein Ssb [Escherichia coli]
Length = 193
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|315497353|ref|YP_004086157.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
gi|315415365|gb|ADU12006.1| single-strand binding protein [Asticcacaulis excentricus CB 48]
Length = 160
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + +G + +V T + ++ G D + +WHR+ + N+
Sbjct: 5 VNKVIIIGHLGKDPEIRTTNSGDRIANMTVATSETWRDKLSG--DRKEKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG + R + D G K EI ++R
Sbjct: 63 ALAKIAEEYLRKGSQVYLEGSLATRKWTDQ-QGVEKYTTEIVLQR 106
>gi|146277854|ref|YP_001168013.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556095|gb|ABP70708.1| single-strand binding protein [Rhodobacter sphaeroides ATCC 17025]
Length = 132
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + NG V + T + + G + + +WH +A+ NE
Sbjct: 5 INKVILIGTLGRDPEVRTFANGGKVVNLRLATSEQWKDKQSGERK--ERTEWHSVAITNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG A + L K S VY+EG +E R + D +G + E+ +R
Sbjct: 63 PLGRIAEQYLRKGSKVYLEGQLETRKWQDK-DGADRYTTEVVLR 105
>gi|422367295|ref|ZP_16447750.1| single-strand binding family protein, partial [Escherichia coli MS
153-1]
gi|315290015|gb|EFU49401.1| single-strand binding family protein [Escherichia coli MS 153-1]
Length = 179
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|29653623|ref|NP_819315.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 493]
gi|154707576|ref|YP_001425151.1| single-strand DNA binding protein [Coxiella burnetii Dugway
5J108-111]
gi|164686023|ref|ZP_01947649.2| single-stranded DNA-binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212218103|ref|YP_002304890.1| single-strand DNA binding protein [Coxiella burnetii CbuK_Q154]
gi|37999375|sp|Q83EP4.1|SSB_COXBU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|29540885|gb|AAO89829.1| single-strand DNA binding protein [Coxiella burnetii RSA 493]
gi|154356862|gb|ABS78324.1| single-strand DNA binding protein [Coxiella burnetii Dugway
5J108-111]
gi|164601569|gb|EAX31729.2| single-stranded DNA-binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012365|gb|ACJ19745.1| single-strand DNA binding protein [Coxiella burnetii CbuK_Q154]
Length = 158
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + NG V ++ T + + G +L + +WHRIA
Sbjct: 3 RGVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTG--ELQERTEWHRIAFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N EI+G Y L K S +Y+EG + R + D NG + EI
Sbjct: 61 NRLAEIVGEY----LRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEII 102
>gi|307245645|ref|ZP_07527731.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254605|ref|ZP_07536437.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307259058|ref|ZP_07540788.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853347|gb|EFM85566.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862446|gb|EFM94408.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866725|gb|EFM98583.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 174
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|195940138|ref|ZP_03085520.1| single-stranded DNA-binding protein, partial [Escherichia coli
O157:H7 str. EC4024]
Length = 109
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|32034137|ref|ZP_00134369.1| COG0629: Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208261|ref|YP_001053486.1| single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165976201|ref|YP_001651794.1| single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190150114|ref|YP_001968639.1| single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303251219|ref|ZP_07337398.1| single-strand DNA-binding protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307252357|ref|ZP_07534254.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307256808|ref|ZP_07538587.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307263450|ref|ZP_07545065.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126097053|gb|ABN73881.1| single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876302|gb|ABY69350.1| single stranded DNA binding protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189915245|gb|ACE61497.1| single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649953|gb|EFL80130.1| single-strand DNA-binding protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306860279|gb|EFM92295.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306864856|gb|EFM96760.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306871093|gb|EFN02822.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 174
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|381169170|ref|ZP_09878344.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Phaeospirillum molischianum DSM 120]
gi|380681784|emb|CCG43166.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Phaeospirillum molischianum DSM 120]
Length = 168
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T + R G + + +WHR+ + N
Sbjct: 5 VNKVILVGNLGRDPEVRTSQDGAKIVSLNIATSESWKDRASGERK--EKTEWHRVVIFNP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K SSVY+EG ++ R + D +G+ + E+ I R
Sbjct: 63 NLADVAERYLRKGSSVYIEGALQTRKWTDQ-SGQERYTTEVVIGR 106
>gi|410653202|ref|YP_006956490.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|410653804|ref|YP_006957092.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|417136945|ref|ZP_11980826.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0259]
gi|381288334|gb|AFG21226.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|381288498|gb|AFG21389.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|386159422|gb|EIH15751.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0259]
Length = 150
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|126729695|ref|ZP_01745508.1| single-strand binding protein [Sagittula stellata E-37]
gi|126709814|gb|EBA08867.1| single-strand binding protein [Sagittula stellata E-37]
Length = 172
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGERR--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|432864748|ref|ZP_20088059.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
gi|431402970|gb|ELG86272.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
Length = 154
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|60115630|ref|YP_209421.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|193063136|ref|ZP_03044228.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|226201020|ref|YP_002756632.1| single-stranded DNA-binding protein [Escherichia coli]
gi|300998489|ref|ZP_07181970.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|302651684|ref|YP_003829065.1| single-stranded DNA-binding protein [Escherichia coli]
gi|317054693|ref|YP_004119760.1| Ssb [Escherichia coli]
gi|386730474|ref|YP_006200886.1| hypothetical protein STM474_p228 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|386730579|ref|YP_006203557.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|407484738|ref|YP_006781774.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|410496021|ref|YP_006903537.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|410592531|ref|YP_006952328.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|410593621|ref|YP_006954388.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410653958|ref|YP_006957245.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|410654401|ref|YP_006957982.1| single-stranded DNA-binding protein Ssb' [Salmonella enterica
subsp. enterica serovar Derby]
gi|417198154|ref|ZP_12016575.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
gi|417808774|ref|ZP_12455529.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|417868229|ref|ZP_12513259.1| hypothetical protein C22711_5152 [Escherichia coli O104:H4 str.
C227-11]
gi|418042260|ref|ZP_12680464.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
gi|418306172|ref|ZP_12917965.1| single-stranded DNA-binding protein Ssb [Escherichia coli UMNF18]
gi|418776245|ref|ZP_13332193.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|419287204|ref|ZP_13829356.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10F]
gi|419343355|ref|ZP_13884758.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|419703468|ref|ZP_14231034.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|419730050|ref|ZP_14257003.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419735437|ref|ZP_14262315.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419740711|ref|ZP_14267433.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419895279|ref|ZP_14415118.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|419942267|ref|ZP_14458873.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|420323647|ref|ZP_14825441.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri CCH060]
gi|421827774|ref|ZP_16263107.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|422789160|ref|ZP_16841892.1| single-strand binding protein [Escherichia coli H489]
gi|422842348|ref|ZP_16890306.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|422992260|ref|ZP_16983027.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C227-11]
gi|422997313|ref|ZP_16988074.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C236-11]
gi|423012657|ref|ZP_17003386.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-3677]
gi|423023945|ref|ZP_17014647.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4404]
gi|423029106|ref|ZP_17019798.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4522]
gi|423034254|ref|ZP_17024937.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4623]
gi|423039431|ref|ZP_17030104.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|423044472|ref|ZP_17035138.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|423049617|ref|ZP_17040272.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|423056560|ref|ZP_17045364.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|423061718|ref|ZP_17050513.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|423705271|ref|ZP_17679690.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|424490451|ref|ZP_17938945.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|424768492|ref|ZP_18195767.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425376333|ref|ZP_18760874.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|429775564|ref|ZP_19307558.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02030]
gi|429780886|ref|ZP_19312828.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429784802|ref|ZP_19316708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02092]
gi|429790517|ref|ZP_19322385.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02093]
gi|429796370|ref|ZP_19328190.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02281]
gi|429802295|ref|ZP_19334067.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02318]
gi|429805925|ref|ZP_19337667.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02913]
gi|429811522|ref|ZP_19343218.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03439]
gi|429816876|ref|ZP_19348528.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-04080]
gi|429822082|ref|ZP_19353691.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03943]
gi|429938201|ref|ZP_19404080.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429943342|ref|ZP_19409210.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429948460|ref|ZP_19414314.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429958722|ref|ZP_19424550.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec12-0466]
gi|432483387|ref|ZP_19725332.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|432483402|ref|ZP_19725344.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|432502880|ref|ZP_19744621.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|432590488|ref|ZP_19826832.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|432823233|ref|ZP_20056919.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|432828214|ref|ZP_20061857.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|433108961|ref|ZP_20294867.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
gi|45758188|gb|AAS76400.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|192931395|gb|EDV83997.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|219881649|gb|ACL52019.1| single-stranded DNA-binding protein [Escherichia coli]
gi|284433221|gb|ADB84960.1| Ssb [Escherichia coli]
gi|300304006|gb|EFJ58526.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|302310087|gb|ADL13959.1| Ssb [Escherichia coli]
gi|321271408|gb|ADW79498.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|321271708|gb|ADW79795.1| single-stranded DNA-binding protein Ssb [Escherichia coli]
gi|323133087|gb|ADX20515.1| hypothetical protein STM474_p228 [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|323959167|gb|EGB54833.1| single-strand binding protein [Escherichia coli H489]
gi|339418272|gb|AEJ59941.1| single-stranded DNA-binding protein Ssb [Escherichia coli UMNF18]
gi|340736634|gb|EGR71059.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|341921518|gb|EGT71117.1| hypothetical protein C22711_5152 [Escherichia coli O104:H4 str.
C227-11]
gi|354855964|gb|EHF16431.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C236-11]
gi|354856089|gb|EHF16555.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. C227-11]
gi|354874118|gb|EHF34493.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-3677]
gi|354874168|gb|EHF34541.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4404]
gi|354879209|gb|EHF39548.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4522]
gi|354886994|gb|EHF47274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4623]
gi|354892171|gb|EHF52382.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C1]
gi|354896925|gb|EHF57088.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C2]
gi|354903470|gb|EHF63571.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C3]
gi|354909483|gb|EHF69515.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C4]
gi|354910992|gb|EHF70999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-4632 C5]
gi|371601201|gb|EHN89961.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H397]
gi|378123000|gb|EHW84420.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10F]
gi|378178232|gb|EHX39002.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|380345352|gb|EIA33674.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|381139633|emb|CCF76844.1| single-stranded DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|381288803|gb|AFG21692.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg]
gi|381293692|gb|EIC34834.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381294876|gb|EIC36003.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381295248|gb|EIC36366.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|383474813|gb|EID66788.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
gi|385704326|gb|EIG41404.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H730]
gi|386188587|gb|EIH77381.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
gi|388361570|gb|EIL25671.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|388423141|gb|EIL82687.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|390797525|gb|EIO64767.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|391258490|gb|EIQ17588.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri CCH060]
gi|392746476|gb|EJA03485.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|396582653|gb|AFN88356.1| single-stranded DNA-binding protein [Escherichia coli]
gi|407056923|gb|AFS76973.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|408073826|gb|EKH08130.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|408313380|gb|EKJ30028.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|408795313|gb|AFU91682.1| single-stranded DNA-binding protein Ssb' [Salmonella enterica
subsp. enterica serovar Derby]
gi|421946073|gb|EKU03231.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|429349190|gb|EKY85938.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02033-1]
gi|429349324|gb|EKY86070.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02030]
gi|429350329|gb|EKY87061.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02092]
gi|429363762|gb|EKZ00388.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02093]
gi|429365216|gb|EKZ01830.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02281]
gi|429368207|gb|EKZ04797.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02318]
gi|429380272|gb|EKZ16764.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-02913]
gi|429381930|gb|EKZ18404.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03439]
gi|429382103|gb|EKZ18569.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-03943]
gi|429394325|gb|EKZ30702.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. 11-04080]
gi|429422728|gb|EKZ58841.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-4988]
gi|429430642|gb|EKZ66701.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-5603]
gi|429439529|gb|EKZ75511.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-6006]
gi|429446874|gb|EKZ82800.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec12-0466]
gi|431002852|gb|ELD18351.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|431002871|gb|ELD18364.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE210]
gi|431024788|gb|ELD37930.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE216]
gi|431116396|gb|ELE19843.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE58]
gi|431365059|gb|ELG51578.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE118]
gi|431370510|gb|ELG56307.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|431618696|gb|ELI87662.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE148]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|421827686|ref|ZP_16263021.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|408074044|gb|EKH08342.1| single-stranded DNA-binding protein [Escherichia coli PA7]
Length = 155
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|261495776|ref|ZP_05992213.1| single-stranded DNA-binding protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308565|gb|EEY09831.1| single-stranded DNA-binding protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 147
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V SV T ++ + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWNDKNTGERR--ELTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VY+EG + R + D NG+ + EI
Sbjct: 61 RQAEVCGQY----LRKGSKVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|444308391|ref|ZP_21144037.1| ssDNA-binding protein [Ochrobactrum intermedium M86]
gi|443488223|gb|ELT50979.1| ssDNA-binding protein [Ochrobactrum intermedium M86]
Length = 152
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + +G TV + T + R G + + +WH + + NE
Sbjct: 5 VNKVILVGYLGADPDVRQMNSGDTVVNMRIATSESWRDRQTGER--KEKTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R + D NG + EI +++
Sbjct: 63 GLAKIAEQYLKKGSKVYIEGQLQTRKWQDQ-NGNDRYTTEIVLKQ 106
>gi|432979654|ref|ZP_20168440.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE211]
gi|433098381|ref|ZP_20284549.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE139]
gi|433123399|ref|ZP_20309012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE157]
gi|433137672|ref|ZP_20322978.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE166]
gi|431498079|gb|ELH77294.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE211]
gi|431612517|gb|ELI81743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE139]
gi|431634831|gb|ELJ03051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE157]
gi|431651476|gb|ELJ18726.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE166]
Length = 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417225622|ref|ZP_12028791.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.154]
gi|386198538|gb|EIH97530.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.154]
Length = 195
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 3 VRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVL 60
Query: 141 HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 61 FGK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|171464183|ref|YP_001798296.1| single-strand binding protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193721|gb|ACB44682.1| single-strand binding protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 151
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G V P + + +G VT SV T + + G ++ + +WHR+A
Sbjct: 4 VNKVIIVGNVGRDPETRYMPSGDAVTNISVATSDRYKDKQTG--EMKETTEWHRVAFFGK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
EI G Y L K S VYVEG + R + D+ +G+ K EI
Sbjct: 62 LAEIAGQY----LKKGSQVYVEGRLRTRKWTDA-SGQEKYSTEIV 101
>gi|161831024|ref|YP_001596218.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 331]
gi|161762891|gb|ABX78533.1| single-stranded DNA-binding protein [Coxiella burnetii RSA 331]
Length = 158
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + NG V ++ T + + G +L + +WHRIA
Sbjct: 3 RGVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTG--ELQERTEWHRIAFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N EI+G Y L K S +Y+EG + R + D NG + EI
Sbjct: 61 NRLAEIVGEY----LRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEII 102
>gi|429907768|ref|ZP_19373735.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9990]
gi|429396552|gb|EKZ32902.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9990]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVVLVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R ++D NG + I EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWDD--NGITRYITEILVKTTGT 108
>gi|157804225|ref|YP_001492774.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
McKiel]
gi|379023366|ref|YP_005300027.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
CA410]
gi|157785488|gb|ABV73989.1| single-strand DNA-binding protein [Rickettsia canadensis str.
McKiel]
gi|376324304|gb|AFB21545.1| single-stranded DNA-binding protein [Rickettsia canadensis str.
CA410]
Length = 152
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + R+ G + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRVTGER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|294083970|ref|YP_003550727.1| single-stranded DNA-binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663542|gb|ADE38643.1| Single-stranded DNA-binding protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 168
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K + G + P + ++G + S+ T + R G + + +WHR+ + NE
Sbjct: 5 VNKVTLVGNLGRDPEVRSTQDGAKIVQLSLATSERWKDRNTGEQR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
LG A + L K S+ Y+EG ++ R + D+ G K E+ ++R
Sbjct: 63 NLGRIAEQYLRKGSTCYIEGQLQTRKWTDN-QGVEKYTTEVVLQR 106
>gi|256367561|ref|YP_003108118.1| single-strand binding protein [Escherichia coli]
gi|228480816|gb|ACQ42142.1| single-strand binding protein [Escherichia coli]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|407692492|ref|YP_006817281.1| single-stranded DNA-binding protein [Actinobacillus suis H91-0380]
gi|407388549|gb|AFU19042.1| single-stranded DNA-binding protein [Actinobacillus suis H91-0380]
Length = 178
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|322514134|ref|ZP_08067201.1| single-stranded DNA-binding protein [Actinobacillus ureae ATCC
25976]
gi|322119974|gb|EFX91972.1| single-stranded DNA-binding protein [Actinobacillus ureae ATCC
25976]
Length = 174
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|307250005|ref|ZP_07531974.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857967|gb|EFM90054.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 174
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|212213221|ref|YP_002304157.1| single-strand DNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212011631|gb|ACJ19012.1| single-strand DNA binding protein [Coxiella burnetii CbuG_Q212]
Length = 158
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + NG V ++ T + + G +L + +WHRIA
Sbjct: 3 RGVNKVILIGNLGQDPEVRYTPNGNAVANVTLATSTTWRDKQTG--ELQERTEWHRIAFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N EI+G Y L K S +Y+EG + R + D NG + EI
Sbjct: 61 NRLAEIVGEY----LRKGSKIYIEGSLRTRKWQDK-NGVDRYTTEII 102
>gi|432619980|ref|ZP_19856044.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli KTE75]
gi|431145789|gb|ELE47396.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli KTE75]
Length = 116
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|222104875|ref|YP_002539364.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli chi7122]
gi|387615302|ref|YP_006162300.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|417311327|ref|ZP_12098077.1| Plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PCN033]
gi|422962334|ref|ZP_16972838.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|425382949|ref|ZP_18766893.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|432375287|ref|ZP_19618304.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE12]
gi|221589300|gb|ACM18297.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli chi7122]
gi|312949147|gb|ADR29973.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|338767085|gb|EGP21955.1| Plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PCN033]
gi|371592243|gb|EHN81158.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli H494]
gi|408291417|gb|EKJ10035.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|430901985|gb|ELC23879.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE12]
Length = 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|432762563|ref|ZP_19997025.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE48]
gi|431315437|gb|ELG03349.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE48]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILIGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|432600252|ref|ZP_19836510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE66]
gi|431144950|gb|ELE46632.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE66]
Length = 178
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V + T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQLATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R ++D+ NG + I EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWDDN-NGVTRYITEILVKTTGT 109
>gi|417259965|ref|ZP_12047486.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli 2.3916]
gi|386226413|gb|EII48717.1| plasmid-derived single-stranded DNA-binding protein, partial
[Escherichia coli 2.3916]
Length = 134
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|315633535|ref|ZP_07888825.1| single-stranded DNA-binding protein [Aggregatibacter segnis ATCC
33393]
gi|315477577|gb|EFU68319.1| single-stranded DNA-binding protein [Aggregatibacter segnis ATCC
33393]
Length = 186
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 31 GVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 88
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 89 RQAEVAGEY----LRKGSKVYVEGRLKTRKWQDQ-NGQERYTTEI 128
>gi|68075493|ref|XP_679665.1| single-strand binding protein [Plasmodium berghei strain ANKA]
gi|56500463|emb|CAH94310.1| single-strand binding protein, putative [Plasmodium berghei]
Length = 276
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+ ++K + G+V P KIL G V FS+ T + R S +L WHRI V+
Sbjct: 75 KSLNKITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NSNELKSKTDWHRIVVY 132
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRV-YNDSINGEVKNIPEICI 186
++ + K L K VY++G + R + + +N + + I EI +
Sbjct: 133 DQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNDLNNQPRQITEIVL 178
>gi|417846250|ref|ZP_12492261.1| single-strand binding protein [Haemophilus haemolyticus M21639]
gi|341952880|gb|EGT79395.1| single-strand binding protein [Haemophilus haemolyticus M21639]
Length = 146
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRTMPNGEQVANISVATSESWTDKNSGERKTQ--TEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VYVEG + R + D+ NG+ + EI
Sbjct: 61 RQAEICGQY----LQKGSQVYVEGRLRTRKWQDN-NGQDRYTTEI 100
>gi|163867619|ref|YP_001608818.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017265|emb|CAK00823.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 148
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G++ P K + +G + FS+ T + + K + +WH I V N
Sbjct: 2 LNKVTLIGRLGANPESKTMTSGAEIVNFSIATSESYTDKKTNQK--VEKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A++ L K S VY+EG ++ R + D NG + EI + +
Sbjct: 60 HLAKIALQYLSKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQ 103
>gi|309798193|ref|ZP_07692559.1| single-strand binding family protein [Escherichia coli MS 145-7]
gi|308118220|gb|EFO55482.1| single-strand binding family protein [Escherichia coli MS 145-7]
Length = 192
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|415835826|ref|ZP_11518390.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli RN587/1]
gi|419281304|ref|ZP_13823531.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10E]
gi|420392519|ref|ZP_14891769.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli EPEC C342-62]
gi|323191637|gb|EFZ76894.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli RN587/1]
gi|378121971|gb|EHW83418.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10E]
gi|391311777|gb|EIQ69408.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli EPEC C342-62]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|168770608|ref|ZP_02795615.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|189360566|gb|EDU78985.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
Length = 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|193070408|ref|ZP_03051349.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|432771993|ref|ZP_20006308.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE54]
gi|192956227|gb|EDV86689.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|431324369|gb|ELG11822.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE54]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|452744258|ref|ZP_21944105.1| single-stranded DNA-binding protein [Mannheimia haemolytica
serotype 6 str. H23]
gi|452087622|gb|EME03998.1| single-stranded DNA-binding protein [Mannheimia haemolytica
serotype 6 str. H23]
Length = 171
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVCGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|405945696|gb|EKC17439.1| Single-stranded DNA-binding protein [Crassostrea gigas]
Length = 151
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + G + S+ T + R G + + +WHR+A+ NE
Sbjct: 5 VNKVILIGNLGRDPEVRSTQAGGKIVNLSIATSERWKDRNTGEQK--ERTEWHRVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
LG A + L K S+ +VEG ++ R + D
Sbjct: 63 ALGRIAEQYLKKGSTCHVEGQLQTRKWTD 91
>gi|395784060|ref|ZP_10463904.1| single-strand binding protein [Bartonella melophagi K-2C]
gi|395424777|gb|EJF90953.1| single-strand binding protein [Bartonella melophagi K-2C]
Length = 147
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P +I+ +G V F + T + + G K +WH + V N
Sbjct: 2 INKVILVGNLGADPESRIMPSGTEVVNFRIATSQSYTDKTTGEK--VDKTEWHSVVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
A++ L K S VYVEG ++ R + D +G+ EI + +
Sbjct: 60 HFAKVALQYLSKGSKVYVEGQLQTRKWQDK-SGQTHYTTEIILSQ 103
>gi|410503007|ref|YP_006940062.1| single-stranded DNA-binding protein [Escherichia coli]
gi|417836475|ref|ZP_12482787.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|425281190|ref|ZP_18672329.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|432454204|ref|ZP_19696428.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE193]
gi|433036589|ref|ZP_20224229.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE112]
gi|340730912|gb|EGR60177.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|353233801|emb|CCE21051.1| single-stranded DNA-binding protein [Escherichia coli]
gi|408207538|gb|EKI32272.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|430970958|gb|ELC87982.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE193]
gi|431540166|gb|ELI15794.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE112]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|331668069|ref|ZP_08368921.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA271]
gi|418044252|ref|ZP_12682387.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
gi|331064583|gb|EGI36490.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli TA271]
gi|383472850|gb|EID64894.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli W26]
Length = 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|298155818|ref|YP_003717644.1| putative single-stranded DNA binding protein [Escherichia coli ETEC
1392/75]
gi|297374415|emb|CBL93476.1| putative single-stranded DNA binding protein [Escherichia coli ETEC
1392/75]
Length = 185
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 16 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 73
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K S VY+EG + R + D NG + + EI ++ G
Sbjct: 74 GKLAEVAGEY----LRKGSQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 120
>gi|94676852|ref|YP_588579.1| single-strand binding protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|94220002|gb|ABF14161.1| single-strand binding protein [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 165
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G D + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEIRYMPNGCAVANINLATSESWRDKQTG--DTKEKTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
E+ G Y L K S VY+EG ++ R + D NG+ + EI + +G
Sbjct: 62 GKLAEVTGEY----LRKGSQVYIEGSLQTRKWQDQ-NGQDRYTTEIIVNANG 108
>gi|296114888|ref|ZP_06833536.1| single-stranded DNA-binding protein [Gluconacetobacter hansenii
ATCC 23769]
gi|295978594|gb|EFG85324.1| single-stranded DNA-binding protein [Gluconacetobacter hansenii
ATCC 23769]
Length = 176
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG + ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRNSQNGAKIVSLTLATSETWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
+G A + L K VY+EG ++ R + D +G + E+ I R
Sbjct: 63 RIGDVAERFLRKGRKVYLEGTLQTRKWTDQ-SGMERYTTEVVIDR 106
>gi|301648528|ref|ZP_07248251.1| single-strand binding family protein, partial [Escherichia coli MS
146-1]
gi|301073410|gb|EFK88216.1| single-strand binding family protein [Escherichia coli MS 146-1]
Length = 197
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 22 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 79
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 80 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 126
>gi|82595019|ref|XP_725672.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23480763|gb|EAA17237.1| SINGLE-STRAND BINDING PROTEIN [Plasmodium yoelii yoelii]
Length = 274
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+ ++K + G+V P KIL G V FS+ T + R S +L WHRI V+
Sbjct: 73 KSLNKITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NSNELKSKTDWHRIVVY 130
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRV-YNDSINGEVKNIPEICI 186
++ + K L K VY++G + R + + +N + + I EI +
Sbjct: 131 DQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNDLNNQPRQITEIVL 176
>gi|410609902|ref|YP_006954109.1| Single-stranded DNA-binding protein [Escherichia coli]
gi|389596098|gb|AFK88866.1| Single-stranded DNA-binding protein [Escherichia coli]
Length = 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417605507|ref|ZP_12256049.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_DG131-3]
gi|345367371|gb|EGW99434.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_DG131-3]
Length = 175
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIVVGRLGKDPEVRYIPNGGAVANLQVATSEGWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|422369667|ref|ZP_16450065.1| single-strand binding family protein, partial [Escherichia coli MS
16-3]
gi|315298589|gb|EFU57844.1| single-strand binding family protein [Escherichia coli MS 16-3]
Length = 170
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|300825069|ref|ZP_07105165.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|301304391|ref|ZP_07210504.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|415866795|ref|ZP_11539178.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|300522469|gb|EFK43538.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|300840378|gb|EFK68138.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|315253234|gb|EFU33202.1| single-strand binding family protein [Escherichia coli MS 85-1]
Length = 192
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|300938357|ref|ZP_07153109.1| single-strand binding family protein, partial [Escherichia coli MS
21-1]
gi|300456672|gb|EFK20165.1| single-strand binding family protein [Escherichia coli MS 21-1]
Length = 149
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|300724364|ref|YP_003713682.1| single-strand binding protein [Xenorhabdus nematophila ATCC 19061]
gi|297630899|emb|CBJ91576.1| single-strand binding protein [Xenorhabdus nematophila ATCC 19061]
Length = 170
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + L G TV S+ T + + G +L + +WHR+ +
Sbjct: 4 RGVNKVILLGYLGQDPEIRYLPTGGTVATLSLATSENWKDKQTG--ELREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG ++ R + D+ G+ + E+ + +G+
Sbjct: 62 GK-LAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGS 109
>gi|145590082|ref|YP_001156679.1| single-strand binding protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048488|gb|ABP35115.1| single-strand binding protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 151
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G V P + + +G VT SV T + + G ++ + +WHR+A
Sbjct: 4 VNKVIIVGNVGRDPETRYMPSGDAVTNISVATSDRYKDKQTG--EMKETTEWHRVAFFGK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
EI G Y L K S VYVEG + R + D+ +G+ K EI
Sbjct: 62 LAEIAGQY----LKKGSQVYVEGRLRTRKWTDA-SGQEKYSTEIV 101
>gi|419373337|ref|ZP_13914412.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC14B]
gi|378229275|gb|EHX89417.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC14B]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 80 GFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIA 139
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+
Sbjct: 2 AVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVV 59
Query: 140 VHN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 60 LFGKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|34581111|ref|ZP_00142591.1| single-strand binding protein [Rickettsia sibirica 246]
gi|28262496|gb|EAA26000.1| single-strand binding protein [Rickettsia sibirica 246]
Length = 152
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|303252297|ref|ZP_07338463.1| single-strand DNA-binding protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307247767|ref|ZP_07529804.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|302648756|gb|EFL78946.1| single-strand DNA-binding protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855710|gb|EFM87876.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
Length = 174
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|329850841|ref|ZP_08265686.1| single-stranded DNA-binding protein [Asticcacaulis biprosthecum
C19]
gi|328841156|gb|EGF90727.1| single-stranded DNA-binding protein [Asticcacaulis biprosthecum
C19]
Length = 169
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V +V T + + G + + +WHR+ + N+
Sbjct: 5 VNKVILIGNLGKDPEIRTLNSGDRVANLTVATSEQWRDKATGERK--EKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S+VY+EG ++ R + D +G K E+ +++
Sbjct: 63 NLAKIAEQYLRKGSTVYLEGSLQTRKWTDQ-SGVEKYSTEVVLQK 106
>gi|425291916|ref|ZP_18682586.1| single-stranded DNA-binding protein [Escherichia coli 3006]
gi|408203824|gb|EKI28831.1| single-stranded DNA-binding protein [Escherichia coli 3006]
Length = 175
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|305667815|ref|YP_003864289.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli]
gi|304655564|emb|CBM42226.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli]
Length = 175
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|255264735|ref|ZP_05344077.1| single-stranded DNA-binding protein [Thalassiobium sp. R2A62]
gi|255107070|gb|EET49744.1| single-stranded DNA-binding protein [Thalassiobium sp. R2A62]
Length = 172
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSENWKDRNTGER--KERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLARVAEQYLRKGSKVYLEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|350426037|ref|XP_003494313.1| PREDICTED: single-stranded DNA-binding protein-like [Bombus
impatiens]
Length = 170
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKP-VQWHRIAV 140
RG++K I+ G + P + L NG VT SV T + + G PK +WHR+ +
Sbjct: 4 RGINKVILVGNLGQDPEVRYLPNGGAVTTISVATSETWKDKQTGE---PKERTEWHRVVI 60
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L + S VY+EG ++ R + D G+ + E+ +
Sbjct: 61 FGRLAEIAGEY----LRRGSQVYIEGALQTRKWQDQT-GQDRYTTEVVV 104
>gi|418844635|ref|ZP_13399422.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392814266|gb|EJA70225.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
Length = 172
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + R G ++ + +WHR+ V
Sbjct: 4 RGVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRDRQDG--EMREHTEWHRVVVF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D +G+ K E+ + ++G
Sbjct: 62 GK-LAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVGQNGT 109
>gi|341584444|ref|YP_004764935.1| single-stranded DNA-binding protein [Rickettsia heilongjiangensis
054]
gi|350273968|ref|YP_004885281.1| single-strand DNA-binding protein [Rickettsia japonica YH]
gi|383482746|ref|YP_005391660.1| single-stranded DNA-binding protein [Rickettsia montanensis str.
OSU 85-930]
gi|340808669|gb|AEK75257.1| single-stranded DNA-binding protein [Rickettsia heilongjiangensis
054]
gi|348593181|dbj|BAK97142.1| single-strand DNA-binding protein [Rickettsia japonica YH]
gi|378935100|gb|AFC73601.1| single-stranded DNA-binding protein [Rickettsia montanensis str.
OSU 85-930]
Length = 152
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|386390519|ref|ZP_10075306.1| single-stranded DNA-binding protein [Haemophilus
paraphrohaemolyticus HK411]
gi|385692983|gb|EIG23646.1| single-stranded DNA-binding protein [Haemophilus
paraphrohaemolyticus HK411]
Length = 157
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G++ + P + + NG V SV T + + G K + +WH I
Sbjct: 3 GVNKVIIVGRLGNDPEMRTMPNGDPVAKISVATSEEWTDKQTGEKK--QNTEWHNIIAFR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
+I+G Y L K S VYVEG I R + D NG+ + EI
Sbjct: 61 KLADIIGQY----LKKGSQVYVEGKIRTRKWQDQ-NGQDRYTTEII 101
>gi|365888818|ref|ZP_09427555.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3809]
gi|365335477|emb|CCE00086.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3809]
Length = 165
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S+VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGSTVYIEGALQTRKWTD 91
>gi|331675750|ref|ZP_08376468.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H591]
gi|331076524|gb|EGI47800.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H591]
Length = 186
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|367471946|ref|ZP_09471543.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 285]
gi|365275785|emb|CCD84011.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 285]
Length = 164
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S+VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGSTVYIEGALQTRKWTD 91
>gi|10955315|ref|NP_052656.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
Sakai]
gi|168752311|ref|ZP_02777333.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4113]
gi|168758957|ref|ZP_02783964.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4401]
gi|168763064|ref|ZP_02788071.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4501]
gi|168769264|ref|ZP_02794271.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4486]
gi|168777513|ref|ZP_02802520.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4196]
gi|168784340|ref|ZP_02809347.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4076]
gi|168790146|ref|ZP_02815153.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC869]
gi|168801260|ref|ZP_02826267.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC508]
gi|195939991|ref|ZP_03085373.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4024]
gi|208811302|ref|ZP_03253062.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208817453|ref|ZP_03258482.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208823394|ref|ZP_03263711.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209395627|ref|YP_002268446.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|217329905|ref|ZP_03445980.1| single-strand binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|254667507|ref|YP_003082193.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|261225679|ref|ZP_05939960.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261257866|ref|ZP_05950399.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK966]
gi|387885652|ref|YP_006315953.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|416308050|ref|ZP_11654905.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|416322665|ref|ZP_11664382.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|416332791|ref|ZP_11670658.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|419043096|ref|ZP_13590078.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3A]
gi|419050589|ref|ZP_13597479.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3B]
gi|419056167|ref|ZP_13603009.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3C]
gi|419063045|ref|ZP_13609780.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3D]
gi|419072598|ref|ZP_13618189.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3E]
gi|419083934|ref|ZP_13629368.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4A]
gi|419088981|ref|ZP_13634330.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4B]
gi|419092093|ref|ZP_13637391.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4C]
gi|419097335|ref|ZP_13642569.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4D]
gi|419103039|ref|ZP_13648199.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4E]
gi|419108136|ref|ZP_13653243.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4F]
gi|420270884|ref|ZP_14773240.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|420274435|ref|ZP_14776757.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|420283125|ref|ZP_14785356.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|420286665|ref|ZP_14788865.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|420289707|ref|ZP_14791880.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|420296711|ref|ZP_14798803.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|420305114|ref|ZP_14807109.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|420308456|ref|ZP_14810425.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|420315788|ref|ZP_14817665.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|421811780|ref|ZP_16247545.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|421816008|ref|ZP_16251584.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0821]
gi|421822795|ref|ZP_16258228.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|423652164|ref|ZP_17627660.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|424074700|ref|ZP_17812102.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|424080850|ref|ZP_17817763.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|424093537|ref|ZP_17829429.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|424093629|ref|ZP_17829510.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|424106716|ref|ZP_17841371.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|424106883|ref|ZP_17841521.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|424119079|ref|ZP_17852856.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|424119177|ref|ZP_17852946.1| single-stranded DNA-binding protein [Escherichia coli PA5]
gi|424131305|ref|ZP_17864180.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|424131411|ref|ZP_17864277.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|424137875|ref|ZP_17870253.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|424144319|ref|ZP_17876135.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|424150604|ref|ZP_17881925.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|424175397|ref|ZP_17887518.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|424336610|ref|ZP_17898786.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|424416861|ref|ZP_17899003.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|424453013|ref|ZP_17904609.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|424459262|ref|ZP_17910295.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|424465744|ref|ZP_17915993.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|424472207|ref|ZP_17921924.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|424484086|ref|ZP_17933037.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|424484247|ref|ZP_17933177.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|424497202|ref|ZP_17944622.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|424503773|ref|ZP_17950616.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|424510032|ref|ZP_17956360.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|424517475|ref|ZP_17961994.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|424517623|ref|ZP_17962108.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|424529405|ref|ZP_17973090.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|424529528|ref|ZP_17973200.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|424547844|ref|ZP_17990121.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|424554120|ref|ZP_17995900.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|424560215|ref|ZP_18001572.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|424560353|ref|ZP_18001697.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|424566492|ref|ZP_18007465.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|424584804|ref|ZP_18024423.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|425101219|ref|ZP_18503926.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.2239]
gi|425108793|ref|ZP_18510980.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|425122879|ref|ZP_18524518.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.0586]
gi|425135219|ref|ZP_18536004.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|425138390|ref|ZP_18538858.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|425147373|ref|ZP_18547336.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0869]
gi|425159237|ref|ZP_18558474.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|425162772|ref|ZP_18561710.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|425167314|ref|ZP_18565984.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|425180935|ref|ZP_18578652.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|425189686|ref|ZP_18586925.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|425192276|ref|ZP_18589283.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|425196385|ref|ZP_18593110.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|425202927|ref|ZP_18599094.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|425221371|ref|ZP_18616295.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|425221485|ref|ZP_18616401.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|425233939|ref|ZP_18627954.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|425234093|ref|ZP_18628094.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|425239882|ref|ZP_18633573.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|425258266|ref|ZP_18650725.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|425258420|ref|ZP_18650852.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|425270441|ref|ZP_18662037.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|425298012|ref|ZP_18688082.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|425314606|ref|ZP_18703742.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|425320650|ref|ZP_18709397.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|425326832|ref|ZP_18715123.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|425333068|ref|ZP_18720846.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|425339270|ref|ZP_18726564.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|425342421|ref|ZP_18729400.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|425351413|ref|ZP_18737843.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|425357521|ref|ZP_18743555.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|425363632|ref|ZP_18749252.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|425369937|ref|ZP_18754961.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|425376053|ref|ZP_18760662.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|425389232|ref|ZP_18772765.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|425389447|ref|ZP_18772950.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|425401744|ref|ZP_18784416.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|425401870|ref|ZP_18784523.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|425414156|ref|ZP_18795892.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|425414528|ref|ZP_18796204.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|425425604|ref|ZP_18806706.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|428944151|ref|ZP_19016854.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1467]
gi|428956208|ref|ZP_19027971.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1042]
gi|428956314|ref|ZP_19028068.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 89.0511]
gi|428968864|ref|ZP_19039538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0091]
gi|428975004|ref|ZP_19045246.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0039]
gi|428975145|ref|ZP_19045362.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.2281]
gi|428987045|ref|ZP_19056392.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0055]
gi|428992962|ref|ZP_19061923.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0056]
gi|428993058|ref|ZP_19062013.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 94.0618]
gi|428999035|ref|ZP_19067595.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0183]
gi|429011530|ref|ZP_19078867.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.1288]
gi|429017708|ref|ZP_19084559.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0943]
gi|429017853|ref|ZP_19084677.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0428]
gi|429029903|ref|ZP_19095820.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0939]
gi|429041891|ref|ZP_19106942.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0932]
gi|429042007|ref|ZP_19107051.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0107]
gi|429050351|ref|ZP_19114953.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0003]
gi|429055747|ref|ZP_19120133.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.1742]
gi|429064353|ref|ZP_19128277.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0007]
gi|429070636|ref|ZP_19134033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0672]
gi|429076131|ref|ZP_19139363.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|429076597|ref|ZP_19139820.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0713]
gi|429823316|ref|ZP_19354906.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0109]
gi|429829773|ref|ZP_19360726.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0010]
gi|444922014|ref|ZP_21241806.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|444942083|ref|ZP_21260641.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0816]
gi|444947504|ref|ZP_21265856.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0839]
gi|444951797|ref|ZP_21270001.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0848]
gi|444956001|ref|ZP_21274030.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1753]
gi|444966845|ref|ZP_21284355.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1775]
gi|444966920|ref|ZP_21284423.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1793]
gi|444979431|ref|ZP_21296410.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli ATCC 700728]
gi|444983340|ref|ZP_21300217.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA11]
gi|444994015|ref|ZP_21310636.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA19]
gi|444999351|ref|ZP_21315831.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA13]
gi|445002602|ref|ZP_21318999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA2]
gi|445004823|ref|ZP_21321188.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA47]
gi|445015586|ref|ZP_21331658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA48]
gi|445018390|ref|ZP_21334376.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA8]
gi|445021272|ref|ZP_21337208.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 7.1982]
gi|445029792|ref|ZP_21345477.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1781]
gi|445034969|ref|ZP_21350513.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1762]
gi|445045458|ref|ZP_21360748.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.4880]
gi|445051137|ref|ZP_21366224.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0083]
gi|445054134|ref|ZP_21369098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0670]
gi|452967862|ref|ZP_21966089.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4009]
gi|3337047|dbj|BAA31806.1| single-strand binding protein [Escherichia coli O157:H7 str. Sakai]
gi|187767263|gb|EDU31107.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4196]
gi|188013818|gb|EDU51940.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4113]
gi|188998480|gb|EDU67476.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4076]
gi|189354334|gb|EDU72753.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4401]
gi|189361618|gb|EDU80037.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4486]
gi|189366719|gb|EDU85135.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC4501]
gi|189370343|gb|EDU88759.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC869]
gi|189376575|gb|EDU94991.1| single-strand binding protein family [Escherichia coli O157:H7 str.
EC508]
gi|208729932|gb|EDZ79149.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208730630|gb|EDZ79329.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208736989|gb|EDZ84674.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209157082|gb|ACI34516.1| single-strand binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|217317136|gb|EEC25569.1| single-strand binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|254595859|gb|ACT75219.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|320188679|gb|EFW63340.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|326337204|gb|EGD61040.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|326347701|gb|EGD71419.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|377897374|gb|EHU61755.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3B]
gi|377901831|gb|EHU66144.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3A]
gi|377905550|gb|EHU69815.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3E]
gi|377910966|gb|EHU75145.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3D]
gi|377911072|gb|EHU75250.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC3C]
gi|377921234|gb|EHU85235.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4A]
gi|377926935|gb|EHU90861.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4B]
gi|377945546|gb|EHV09240.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4C]
gi|377948625|gb|EHV12274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4D]
gi|377952678|gb|EHV16260.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4E]
gi|377965632|gb|EHV29049.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC4F]
gi|386799110|gb|AFJ32143.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|390635948|gb|EIN15559.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|390654728|gb|EIN32755.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|390654807|gb|EIN32818.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|390655455|gb|EIN33396.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|390671469|gb|EIN47897.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|390671873|gb|EIN48246.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|390679181|gb|EIN55106.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|390679777|gb|EIN55651.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|390695382|gb|EIN69915.1| single-stranded DNA-binding protein [Escherichia coli PA5]
gi|390709901|gb|EIN82941.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|390713131|gb|EIN86071.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|390713699|gb|EIN86630.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|390716247|gb|EIN89058.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|390723171|gb|EIN95789.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|390735099|gb|EIO06523.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|390735224|gb|EIO06621.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|390754006|gb|EIO23637.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|390754233|gb|EIO23852.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|390758521|gb|EIO27963.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|390761015|gb|EIO30323.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|390777563|gb|EIO45365.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|390779208|gb|EIO46940.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|390782104|gb|EIO49769.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|390783801|gb|EIO51388.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|390790670|gb|EIO58081.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|390791566|gb|EIO58950.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|390803324|gb|EIO70336.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|390810949|gb|EIO77673.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|390815769|gb|EIO82292.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|390818267|gb|EIO84657.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390820912|gb|EIO87158.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|390825712|gb|EIO91620.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|390826351|gb|EIO92204.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|390838751|gb|EIP02939.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|390846529|gb|EIP10109.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|390856959|gb|EIP19494.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|390864727|gb|EIP26808.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|390873061|gb|EIP34314.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|390873454|gb|EIP34658.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|390878819|gb|EIP39631.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|390903029|gb|EIP62091.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|390908129|gb|EIP66965.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|390913153|gb|EIP71760.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|390913952|gb|EIP72504.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|390918549|gb|EIP76944.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|408061653|gb|EKG96162.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|408075007|gb|EKH09252.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|408081803|gb|EKH15807.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|408088135|gb|EKH21521.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|408097861|gb|EKH30718.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|408100009|gb|EKH32577.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|408116553|gb|EKH47849.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|408132816|gb|EKH62757.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|408133479|gb|EKH63377.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|408133811|gb|EKH63685.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|408143105|gb|EKH72435.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|408155887|gb|EKH84135.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|408168373|gb|EKH95799.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|408169264|gb|EKH96556.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|408175429|gb|EKI02346.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|408179279|gb|EKI05963.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|408194871|gb|EKI20309.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|408207973|gb|EKI32656.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|408222785|gb|EKI46608.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|408233901|gb|EKI56957.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|408235781|gb|EKI58710.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|408241811|gb|EKI64423.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|408250722|gb|EKI72532.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|408261628|gb|EKI82597.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|408261844|gb|EKI82803.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|408270367|gb|EKI90562.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|408272613|gb|EKI92691.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|408280741|gb|EKJ00219.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|408287306|gb|EKJ06184.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|408303015|gb|EKJ20486.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|408314855|gb|EKJ31232.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|408320557|gb|EKJ36651.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408321769|gb|EKJ37774.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|408339813|gb|EKJ54351.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|408351352|gb|EKJ65133.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|408353862|gb|EKJ67339.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|408557136|gb|EKK33674.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|408561824|gb|EKK38017.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.2239]
gi|408575142|gb|EKK50841.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.2524]
gi|408582346|gb|EKK57568.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|408586900|gb|EKK61601.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 8.0586]
gi|408587278|gb|EKK61938.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0869]
gi|408603289|gb|EKK76935.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|408618554|gb|EKK91629.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 10.0821]
gi|427200314|gb|EKV70744.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1042]
gi|427216550|gb|EKV85658.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0091]
gi|427219795|gb|EKV88749.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 89.0511]
gi|427220293|gb|EKV89226.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 88.1467]
gi|427221078|gb|EKV89953.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.0039]
gi|427236052|gb|EKW03653.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 90.2281]
gi|427236105|gb|EKW03702.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0055]
gi|427236631|gb|EKW04193.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 93.0056]
gi|427255865|gb|EKW22103.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 94.0618]
gi|427255875|gb|EKW22112.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.1288]
gi|427256560|gb|EKW22720.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0943]
gi|427272767|gb|EKW37491.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0183]
gi|427287727|gb|EKW51459.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0428]
gi|427287985|gb|EKW51655.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0932]
gi|427295135|gb|EKW58274.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0939]
gi|427301939|gb|EKW64787.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0003]
gi|427308825|gb|EKW71166.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0007]
gi|427312895|gb|EKW75033.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0107]
gi|427313797|gb|EKW75878.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0672]
gi|427315243|gb|EKW77250.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.1742]
gi|427324113|gb|EKW85604.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|427334967|gb|EKW96026.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0713]
gi|429261167|gb|EKY44627.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 96.0109]
gi|429262554|gb|EKY45861.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 97.0010]
gi|444552933|gb|ELV30664.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 09BKT078844]
gi|444559536|gb|ELV36753.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0839]
gi|444560253|gb|ELV37425.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0816]
gi|444569336|gb|ELV45936.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1775]
gi|444569581|gb|ELV46162.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0848]
gi|444584041|gb|ELV59714.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1753]
gi|444587749|gb|ELV63160.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1793]
gi|444598079|gb|ELV73018.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli ATCC 700728]
gi|444601511|gb|ELV76312.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA11]
gi|444601743|gb|ELV76510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA19]
gi|444601751|gb|ELV76517.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA13]
gi|444615789|gb|ELV89978.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA2]
gi|444617676|gb|ELV91785.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA48]
gi|444630985|gb|ELW04607.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA8]
gi|444634920|gb|ELW08366.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli PA47]
gi|444641326|gb|ELW14559.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1781]
gi|444645762|gb|ELW18816.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.1762]
gi|444649359|gb|ELW22258.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 7.1982]
gi|444662018|gb|ELW34288.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3.4880]
gi|444666495|gb|ELW38560.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 95.0083]
gi|444675223|gb|ELW46697.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0670]
Length = 150
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|15893218|ref|NP_360932.1| single-stranded DNA-binding protein [Rickettsia conorii str. Malish
7]
gi|165933856|ref|YP_001650645.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Iowa]
gi|229587202|ref|YP_002845703.1| single-stranded DNA-binding protein [Rickettsia africae ESF-5]
gi|238650832|ref|YP_002916687.1| single-strand DNA-binding protein [Rickettsia peacockii str.
Rustic]
gi|374319815|ref|YP_005066314.1| ssDNA-binding protein [Rickettsia slovaca 13-B]
gi|378721940|ref|YP_005286827.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Colombia]
gi|378723284|ref|YP_005288170.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Arizona]
gi|378724638|ref|YP_005289522.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hauke]
gi|379017145|ref|YP_005293380.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Brazil]
gi|379018423|ref|YP_005294658.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hino]
gi|379019737|ref|YP_005295971.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hlp#2]
gi|379713009|ref|YP_005301348.1| single-stranded DNA-binding protein [Rickettsia philipii str. 364D]
gi|383484588|ref|YP_005393501.1| single-stranded DNA-binding protein [Rickettsia parkeri str.
Portsmouth]
gi|383751907|ref|YP_005427008.1| single-stranded DNA-binding protein [Rickettsia slovaca str.
D-CWPP]
gi|37999453|sp|Q92G30.1|SSB_RICCN RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|15620434|gb|AAL03833.1| single-strand binding protein [Rickettsia conorii str. Malish 7]
gi|165908943|gb|ABY73239.1| single-strand DNA binding protein [Rickettsia rickettsii str. Iowa]
gi|228022252|gb|ACP53960.1| Single-stranded DNA-binding protein [Rickettsia africae ESF-5]
gi|238624930|gb|ACR47636.1| single-strand DNA-binding protein [Rickettsia peacockii str.
Rustic]
gi|360042364|gb|AEV92746.1| Single-stranded DNA-binding protein [Rickettsia slovaca 13-B]
gi|376325669|gb|AFB22909.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Brazil]
gi|376326964|gb|AFB24203.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Colombia]
gi|376328308|gb|AFB25546.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Arizona]
gi|376329654|gb|AFB26891.1| single-stranded DNA-binding protein [Rickettsia philipii str. 364D]
gi|376330989|gb|AFB28225.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hino]
gi|376332317|gb|AFB29551.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hlp#2]
gi|376333653|gb|AFB30886.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
Hauke]
gi|378936942|gb|AFC75442.1| single-stranded DNA-binding protein [Rickettsia parkeri str.
Portsmouth]
gi|379774921|gb|AFD20277.1| single-stranded DNA-binding protein [Rickettsia slovaca str.
D-CWPP]
Length = 152
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|191166305|ref|ZP_03028138.1| single-stranded DNA-binding protein [Escherichia coli B7A]
gi|190903732|gb|EDV63448.1| single-stranded DNA-binding protein [Escherichia coli B7A]
Length = 175
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGKLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|354595425|ref|ZP_09013453.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
gi|353671192|gb|EHD12903.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
Length = 161
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + G + ++ T ++ + G + + +WHR+ V NE
Sbjct: 5 VNKVILVGNLGRDPEVRTTDQGTKIVNLTLATSETWNDKQTGER--KEKTEWHRVVVFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A K L K ++VEG ++ R +NDS G + + E+ + R
Sbjct: 63 RLADVAEKYLRKGRKIFVEGVLKTRKWNDS-QGVERYVTEVVLDR 106
>gi|293420953|ref|ZP_06661387.1| single-stranded DNA-binding protein [Escherichia coli B088]
gi|291324823|gb|EFE64239.1| single-stranded DNA-binding protein [Escherichia coli B088]
Length = 177
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|372279007|ref|ZP_09515043.1| single stranded DNA-binding protein [Oceanicola sp. S124]
Length = 182
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 5 VNKVILIGNLGRDPEIRSFQNGGKVCNLRIATSENWKDRNTGERR--ERTEWHTVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + EI +R
Sbjct: 63 PLVRVAEQYLRKGSKVYIEGKLETRKWQDQ-SGQDRYSTEIVLR 105
>gi|290476358|ref|YP_003469262.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
gi|289175695|emb|CBJ82498.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
Length = 170
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + L G TV S+ T + + G +L + +WHR+ +
Sbjct: 4 RGVNKVILLGYLGQDPEIRYLPTGGTVATLSLATSENWKDKQTG--ELREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG ++ R + D+ G+ + E+ + +G+
Sbjct: 62 GK-LAEIAEEYLHKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGS 109
>gi|419304330|ref|ZP_13846255.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11D]
gi|419314610|ref|ZP_13856453.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11E]
gi|378152321|gb|EHX13421.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11E]
gi|378154992|gb|EHX16053.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11D]
Length = 177
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|419167624|ref|ZP_13712043.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7A]
gi|419183967|ref|ZP_13727532.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189605|ref|ZP_13733091.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|378019870|gb|EHV82663.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378020055|gb|EHV82825.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7A]
gi|378021436|gb|EHV84139.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
Length = 179
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|416057051|ref|ZP_11580030.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|444333019|ref|ZP_21149019.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|348001271|gb|EGY42021.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|443552161|gb|ELT59681.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 190
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 32 GVNKVIIVGNLGNDPEVRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 89
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 90 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 129
>gi|416080767|ref|ZP_11586306.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348011173|gb|EGY51152.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 184
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 28 GVNKVIIVGNLGNDPEVRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 85
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 86 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 125
>gi|416074167|ref|ZP_11584458.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444337893|ref|ZP_21151813.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348006983|gb|EGY47341.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443546055|gb|ELT55762.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 184
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 28 GVNKVIIVGNLGNDPEVRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 85
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 86 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 125
>gi|416156198|ref|ZP_11604330.1| single-strand binding protein [Moraxella catarrhalis 101P30B1]
gi|416216445|ref|ZP_11623769.1| single-strand binding protein [Moraxella catarrhalis 7169]
gi|416220862|ref|ZP_11625671.1| single-strand binding protein [Moraxella catarrhalis 103P14B1]
gi|416228924|ref|ZP_11627856.1| single-strand binding protein [Moraxella catarrhalis 46P47B1]
gi|416236165|ref|ZP_11630531.1| single-strand binding protein [Moraxella catarrhalis 12P80B1]
gi|416237787|ref|ZP_11631142.1| single-strand binding protein [Moraxella catarrhalis BC1]
gi|416245760|ref|ZP_11634655.1| single-strand binding protein [Moraxella catarrhalis BC8]
gi|416253264|ref|ZP_11638287.1| single-strand binding protein [Moraxella catarrhalis O35E]
gi|421779212|ref|ZP_16215706.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
gi|326561905|gb|EGE12240.1| single-strand binding protein [Moraxella catarrhalis 7169]
gi|326563339|gb|EGE13606.1| single-strand binding protein [Moraxella catarrhalis 46P47B1]
gi|326563451|gb|EGE13716.1| single-strand binding protein [Moraxella catarrhalis 12P80B1]
gi|326565992|gb|EGE16153.1| single-strand binding protein [Moraxella catarrhalis 103P14B1]
gi|326568875|gb|EGE18944.1| single-strand binding protein [Moraxella catarrhalis BC1]
gi|326571847|gb|EGE21852.1| single-strand binding protein [Moraxella catarrhalis BC8]
gi|326575360|gb|EGE25285.1| single-strand binding protein [Moraxella catarrhalis 101P30B1]
gi|326578025|gb|EGE27889.1| single-strand binding protein [Moraxella catarrhalis O35E]
gi|407813653|gb|EKF84433.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
Length = 236
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + + P + NG + S+ T + R G + + +WHR+ V N
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERK--EHTEWHRV-VFNN 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
L A + L K S +YVEG + R + D+ G+ + EI
Sbjct: 60 RLAEVASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI 100
>gi|432473751|ref|ZP_19715781.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE206]
gi|433080869|ref|ZP_20267351.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE131]
gi|430994393|gb|ELD10723.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE206]
gi|431589956|gb|ELI61071.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE131]
Length = 179
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVMF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|89069575|ref|ZP_01156919.1| single-strand binding protein [Oceanicola granulosus HTCC2516]
gi|89044910|gb|EAR51000.1| single-strand binding protein [Oceanicola granulosus HTCC2516]
Length = 169
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPETRTFQNGGKVCNLRIATSENWKDRNTGERR--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G + E+ +R
Sbjct: 63 PLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGADRYSTEVVLR 105
>gi|296112397|ref|YP_003626335.1| single-stranded DNA-binding protein [Moraxella catarrhalis RH4]
gi|295920091|gb|ADG60442.1| single-stranded DNA-binding protein [Moraxella catarrhalis BBH18]
Length = 236
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + + P + NG + S+ T + R G + + +WHR+ V N
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERK--EHTEWHRV-VFNN 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
L A + L K S +YVEG + R + D+ G+ + EI
Sbjct: 60 RLAEIASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI 100
>gi|316934027|ref|YP_004109009.1| ssDNA-binding protein [Rhodopseudomonas palustris DX-1]
gi|315601741|gb|ADU44276.1| single-strand binding protein [Rhodopseudomonas palustris DX-1]
Length = 167
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + + T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSETWRDRATGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L A + L K + VY+EG ++ R + D E
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGQLQTRKWTDQSGAE 96
>gi|134096251|ref|YP_001101326.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Herminiimonas arsenicoxydans]
gi|133740154|emb|CAL63205.1| Single-stranded DNA-binding protein (SSB) (Helix-destabilizing
protein) [Herminiimonas arsenicoxydans]
Length = 161
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G + P + + NG+ VT +V T + + G K + +WHRI +
Sbjct: 4 VNKVIIVGNLGRDPETRYMPNGEAVTNVAVATTESWKDKTSGDKK--EVTEWHRITFYRK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
EI G Y L K SSVY+EG ++ R + D
Sbjct: 62 LAEIAGQY----LKKGSSVYIEGRLQTRKWTD 89
>gi|425286462|ref|ZP_18677420.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|408195196|gb|EKI20615.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
Length = 179
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|421778837|ref|ZP_16215384.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AD30]
gi|408456089|gb|EKJ79933.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli AD30]
Length = 177
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|10954410|ref|NP_067548.1| single strand binding protein [Aggregatibacter
actinomycetemcomitans]
gi|10880887|gb|AAG24401.1|AF302424_1 single strand binding protein [Aggregatibacter
actinomycetemcomitans]
Length = 145
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G++ + P + + NG++V SV T + + G + + +WHRI +
Sbjct: 3 GVNKVIIVGRLGNEPEMRAMPNGESVANLSVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VY+EG ++ R + D
Sbjct: 61 RQAEVCGEY----LHKGSQVYIEGRLKTRKWQD 89
>gi|395766576|ref|ZP_10447115.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
gi|395415700|gb|EJF82127.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
Length = 148
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P K + +G + FS+ T + + K + +WH + + N
Sbjct: 2 LNKVMLIGRLGADPESKTMNSGAEIVNFSIATSESYTDKKTNQK--VEKTEWHSVVIFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L A++ L K S VYVEG ++ R + D GE
Sbjct: 60 HLAKIALQYLNKGSKVYVEGKLQTRKWQDKNGGE 93
>gi|416243292|ref|ZP_11633813.1| single-strand binding protein [Moraxella catarrhalis BC7]
gi|416249032|ref|ZP_11636366.1| single-strand binding protein [Moraxella catarrhalis CO72]
gi|326569175|gb|EGE19236.1| single-strand binding protein [Moraxella catarrhalis BC7]
gi|326576554|gb|EGE26462.1| single-strand binding protein [Moraxella catarrhalis CO72]
Length = 236
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + + P + NG + S+ T + R G + + +WHR+ V N
Sbjct: 3 VNKVILVGNLGNDPEVRNFDNGGMIATVSIATSERWTDRNTGERK--EHTEWHRV-VFNN 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
L A + L K S +YVEG + R + D+ G+ + EI
Sbjct: 60 RLAEIASQYLRKGSQIYVEGSLRTRKWQDTQTGQERYTTEI 100
>gi|75994530|ref|YP_325644.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EDL933]
gi|149930831|ref|YP_001294727.1| single-stranded DNA-binding protein [Escherichia coli]
gi|37695819|gb|AAR00481.1|AF401292_84 w0063 [Escherichia coli]
gi|3822198|gb|AAC70152.1| single strand binding protein [Escherichia coli O157:H7 str.
EDL933]
Length = 163
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|417642653|ref|ZP_12292755.1| plasmid-derived single-stranded DNA-binding protein domain protein,
partial [Escherichia coli TX1999]
gi|345386087|gb|EGX15923.1| plasmid-derived single-stranded DNA-binding protein domain protein
[Escherichia coli TX1999]
Length = 119
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|157829131|ref|YP_001495373.1| single-stranded DNA-binding protein [Rickettsia rickettsii str.
'Sheila Smith']
gi|157801612|gb|ABV76865.1| single-strand DNA-binding protein [Rickettsia rickettsii str.
'Sheila Smith']
Length = 152
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|424751162|ref|ZP_18179195.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421939789|gb|EKT97298.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
Length = 179
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|300907912|ref|ZP_07125517.1| single-strand binding family protein, partial [Escherichia coli MS
84-1]
gi|300400390|gb|EFJ83928.1| single-strand binding family protein [Escherichia coli MS 84-1]
Length = 122
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|261867163|ref|YP_003255085.1| single-stranded DNA-binding protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415767544|ref|ZP_11483216.1| single-strand DNA-binding protein [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416107296|ref|ZP_11590383.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|444345202|ref|ZP_21153224.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261412495|gb|ACX81866.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348005626|gb|EGY46103.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348658480|gb|EGY76048.1| single-strand DNA-binding protein [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443543186|gb|ELT53447.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 159
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEVRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|456064230|ref|YP_007503200.1| single-strand binding protein [beta proteobacterium CB]
gi|455441527|gb|AGG34465.1| single-strand binding protein [beta proteobacterium CB]
Length = 151
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G V P + + +G VT SV T + + G ++ + +WHR+A
Sbjct: 4 VNKVIIVGNVGRDPETRYMPSGDAVTNISVATSDRYKDKQSG--EMKETTEWHRVAFFGK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
EI G Y L K S VYVEG + R + D+ +G+ K EI
Sbjct: 62 LAEIAGQY----LKKGSQVYVEGRLRTRKWTDA-SGQEKYSTEIV 101
>gi|417599847|ref|ZP_12250462.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
gi|345346699|gb|EGW79021.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3030-1]
Length = 175
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A K L K + VY+EG + R + D NG + EI ++ G
Sbjct: 62 GK-LAEVAGKYLRKGAQVYIEGQLRTRSWED--NGITCYVTEILVKTTGT 108
>gi|350571215|ref|ZP_08939549.1| single-strand binding protein [Neisseria wadsworthii 9715]
gi|349792825|gb|EGZ46672.1| single-strand binding protein [Neisseria wadsworthii 9715]
Length = 169
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
++K I+ G++ P + + NG+ V FSV T ++ R G + + +WH I ++
Sbjct: 3 LNKVILIGRLGRDPEVRYMPNGEAVANFSVATSETWNDRQTGQRV--ERTEWHNITMYRR 60
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
EI G Y L K S VY+EG I+ R Y D E
Sbjct: 61 LAEIAGQY----LKKGSQVYIEGRIQSRKYTDKTGVE 93
>gi|270208475|ref|YP_003329249.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|348589228|ref|YP_004870031.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410592420|ref|YP_006952217.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609342|ref|YP_006953301.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410609442|ref|YP_006953400.1| single-stranded DNA-binding protein [Escherichia coli]
gi|218546511|gb|ACK98900.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|301333124|gb|ADK71071.1| single-stranded DNA-binding protein [Escherichia coli]
gi|346987312|gb|AEO51454.1| single-stranded DNA-binding protein [Escherichia coli]
gi|346987412|gb|AEO51553.1| single-stranded DNA-binding protein [Escherichia coli]
gi|347550326|gb|AEP03723.1| single-stranded DNA-binding protein [Escherichia coli]
Length = 173
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|365966960|ref|YP_004948522.1| single-stranded DNA-binding protein [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365745873|gb|AEW76778.1| single-stranded DNA-binding protein [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 159
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEVRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|416050478|ref|ZP_11576934.1| single-strand DNA-binding protein [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|418464656|ref|ZP_13035595.1| single-stranded DNA-binding protein [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|347994063|gb|EGY35382.1| single-strand DNA-binding protein [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|359756611|gb|EHK90768.1| single-stranded DNA-binding protein [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 159
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|156069867|gb|ABU44869.1| Ssb [Aggregatibacter actinomycetemcomitans Y4]
Length = 132
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNEPEMRTMPNGEAVANISVATSEAWVDKNTGER--REGTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LHKGSKVYIEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|415765593|ref|ZP_11482792.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416047820|ref|ZP_11576111.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|416067722|ref|ZP_11582404.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|429732285|ref|ZP_19266899.1| single-strand binding family protein [Aggregatibacter
actinomycetemcomitans Y4]
gi|347993695|gb|EGY35034.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|348001666|gb|EGY42398.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348653804|gb|EGY69479.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|429156333|gb|EKX98965.1| single-strand binding family protein [Aggregatibacter
actinomycetemcomitans Y4]
Length = 186
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 28 GVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 85
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 86 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 125
>gi|209916870|ref|YP_002291190.1| single-stranded DNA-binding protein [Escherichia coli SE11]
gi|209915296|dbj|BAG80368.1| single-stranded DNA binding protein [Escherichia coli SE11]
Length = 179
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|345134027|ref|YP_004823709.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|417720679|ref|ZP_12369537.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|417720780|ref|ZP_12369637.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|429723658|ref|ZP_19258538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9450]
gi|432360978|ref|ZP_19604177.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE4]
gi|333011547|gb|EGK30960.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|333011661|gb|EGK31070.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri K-227]
gi|345109169|dbj|BAK64452.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|429394597|gb|EKZ30972.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9450]
gi|430871566|gb|ELB95206.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE4]
Length = 175
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|429913076|ref|ZP_19379029.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9941]
gi|432517018|ref|ZP_19754224.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE224]
gi|432702039|ref|ZP_19937176.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE169]
gi|433147325|ref|ZP_20332416.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE168]
gi|429452618|gb|EKZ88499.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli O104:H4 str. Ec11-9941]
gi|431035303|gb|ELD46694.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE224]
gi|431238447|gb|ELF33362.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE169]
gi|431653040|gb|ELJ20156.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE168]
Length = 175
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EVREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|283826866|ref|YP_003377737.1| single-stranded DNA-binding protein [Shigella sonnei]
gi|283466758|emb|CBI12425.1| single-stranded DNA-binding protein [Shigella sonnei]
Length = 186
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|398835869|ref|ZP_10593223.1| single stranded DNA-binding protein [Herbaspirillum sp. YR522]
gi|398214688|gb|EJN01260.1| single stranded DNA-binding protein [Herbaspirillum sp. YR522]
Length = 177
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G + P + + NG+ VT +V T + + G K + +WHRI +
Sbjct: 4 VNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNSGEKK--ELTEWHRITFYRK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
EI G Y L K S +YVEG ++ R + D GE
Sbjct: 62 LAEIAGQY----LKKGSQIYVEGRLQTRKWTDKDGGE 94
>gi|59710960|ref|YP_203736.1| single-stranded DNA-binding protein [Vibrio fischeri ES114]
gi|197335275|ref|YP_002155110.1| single-stranded DNA-binding protein [Vibrio fischeri MJ11]
gi|59479061|gb|AAW84848.1| single-stranded DNA-binding protein [Vibrio fischeri ES114]
gi|197316765|gb|ACH66212.1| single-stranded DNA-binding protein [Vibrio fischeri MJ11]
Length = 177
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGQDPEIRYMPSGGAVANITIATSETWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRFTTEVVVQ 105
>gi|423685067|ref|ZP_17659875.1| single-stranded DNA-binding protein [Vibrio fischeri SR5]
gi|371495568|gb|EHN71163.1| single-stranded DNA-binding protein [Vibrio fischeri SR5]
Length = 178
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGQDPEIRYMPSGGAVANITIATSETWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRFTTEVVVQ 105
>gi|251793872|ref|YP_003008604.1| single-stranded DNA-binding protein [Aggregatibacter aphrophilus
NJ8700]
gi|422337169|ref|ZP_16418141.1| single-stranded DNA-binding protein [Aggregatibacter aphrophilus
F0387]
gi|247535271|gb|ACS98517.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Aggregatibacter
aphrophilus NJ8700]
gi|353345721|gb|EHB90012.1| single-stranded DNA-binding protein [Aggregatibacter aphrophilus
F0387]
Length = 158
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|194446891|ref|YP_002038934.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|218534521|ref|YP_002401051.1| single-stranded DNA-binding protein [Escherichia coli S88]
gi|237702649|ref|ZP_04533130.1| single-stranded DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|419943469|ref|ZP_14460020.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|422752443|ref|ZP_16806344.1| single-strand binding protein [Escherichia coli H252]
gi|432362212|ref|ZP_19605392.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE5]
gi|432383078|ref|ZP_19626012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE15]
gi|432406393|ref|ZP_19649109.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|432406536|ref|ZP_19649249.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|432421301|ref|ZP_19663855.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE178]
gi|432597152|ref|ZP_19833431.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE62]
gi|432757778|ref|ZP_19992311.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE22]
gi|432780898|ref|ZP_20015116.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE59]
gi|432787142|ref|ZP_20021279.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE65]
gi|432828081|ref|ZP_20061729.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|433012137|ref|ZP_20200533.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE229]
gi|433166676|ref|ZP_20351373.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE179]
gi|194358643|gb|ACF57086.1| plasmid-derived single-stranded DNA-binding protein [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|218349725|emb|CAQ87118.1| Single-stranded DNA-binding protein [Escherichia coli S88]
gi|226903235|gb|EEH89494.1| single-stranded DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|323948858|gb|EGB44754.1| single-strand binding protein [Escherichia coli H252]
gi|388420977|gb|EIL80615.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|430888472|gb|ELC11189.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE5]
gi|430905089|gb|ELC26766.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE15]
gi|430930882|gb|ELC51369.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|430931035|gb|ELC51505.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE28]
gi|430946415|gb|ELC66344.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE178]
gi|431132250|gb|ELE34264.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE62]
gi|431297463|gb|ELF87116.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE22]
gi|431324005|gb|ELG11462.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE59]
gi|431339540|gb|ELG26600.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE65]
gi|431371314|gb|ELG57098.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE123]
gi|431515765|gb|ELH93581.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE229]
gi|431680408|gb|ELJ46240.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE179]
Length = 210
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|420104403|ref|ZP_14615099.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9455]
gi|394404118|gb|EJE79586.1| single-stranded DNA-binding protein, partial [Escherichia coli
O111:H11 str. CVM9455]
Length = 172
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 1 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 58
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 59 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 105
>gi|416563644|ref|ZP_11762841.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|417377903|ref|ZP_12146695.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|417472054|ref|ZP_12167876.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|417533869|ref|ZP_12187794.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|327412968|emb|CAX67986.1| single stranded binding protein [Salmonella enterica subsp. VII]
gi|353588496|gb|EHC47526.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353655502|gb|EHC96496.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353659802|gb|EHC99592.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|363571705|gb|EHL55610.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
Length = 178
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + + NG V S+ T + + G K + +WHR+ ++
Sbjct: 4 KGVNKVILVGNLGQDPEVRYMPNGGAVANLSLATSDTWTDKQTGDKK--ERTEWHRVVLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + + G
Sbjct: 62 GK-LAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGT 109
>gi|238921392|ref|YP_002934907.1| single-stranded DNA-binding protein, putative [Edwardsiella
ictaluri 93-146]
gi|238870961|gb|ACR70672.1| single-stranded DNA-binding protein, putative [Edwardsiella
ictaluri 93-146]
Length = 182
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQK--ERTEWHRVALY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG + R + D +G+ + E+ +
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLRTRKWQDQ-SGQDRYTTEVVV 104
>gi|417129931|ref|ZP_11975738.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.0588]
gi|386154270|gb|EIH05540.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 5.0588]
Length = 173
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|220924063|ref|YP_002499365.1| single-strand binding protein [Methylobacterium nodulans ORS 2060]
gi|219948670|gb|ACL59062.1| single-strand binding protein [Methylobacterium nodulans ORS 2060]
Length = 170
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH + ++NE
Sbjct: 5 VNKVILVGNLGRDPETRRLTSGDPVVNLRLATSESWKDKATGER--KEKTEWHSVVIYNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VYVEG ++ R + D +G K E+ ++R
Sbjct: 63 NLARVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGVEKYTTEVVLQR 106
>gi|188574258|ref|YP_001919398.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 53638]
gi|410469286|ref|YP_006902955.1| single stranded DNA-binding protein [Escherichia coli]
gi|415799012|ref|ZP_11498625.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E128010]
gi|450202259|ref|ZP_21893391.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|188501433|gb|ACD54567.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 53638]
gi|323161451|gb|EFZ47353.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E128010]
gi|371781269|emb|CCA64292.1| single stranded DNA-binding protein [Escherichia coli]
gi|449312476|gb|EMD02736.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 175
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417147758|ref|ZP_11988258.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2264]
gi|386162323|gb|EIH24123.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 1.2264]
Length = 173
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|387120845|ref|YP_006286728.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|385875337|gb|AFI86896.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 161
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|269140524|ref|YP_003297225.1| single-strand DNA-binding protein [Edwardsiella tarda EIB202]
gi|387868996|ref|YP_005700465.1| ssDNA-binding protein [Edwardsiella tarda FL6-60]
gi|267986185|gb|ACY86014.1| single-strand DNA-binding protein [Edwardsiella tarda EIB202]
gi|304560309|gb|ADM42973.1| Single-stranded DNA-binding protein [Edwardsiella tarda FL6-60]
Length = 186
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQK--ERTEWHRVALY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG + R + D +G+ + E+ +
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLRTRKWQDQ-SGQDRYTTEVVV 104
>gi|222085984|ref|YP_002544516.1| single-stranded DNA-binding protein [Agrobacterium radiobacter K84]
gi|398379925|ref|ZP_10538043.1| single stranded DNA-binding protein [Rhizobium sp. AP16]
gi|221723432|gb|ACM26588.1| single-strand DNA binding protein [Agrobacterium radiobacter K84]
gi|397721241|gb|EJK81789.1| single stranded DNA-binding protein [Rhizobium sp. AP16]
Length = 182
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + ++ T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIANLNIATSETWRDRNSGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K + VY+EG ++ R + D NG+ K EI ++
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGQDKYSTEIVLQ 105
>gi|191169627|ref|ZP_03031337.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B7A]
gi|419183940|ref|ZP_13727510.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|419189539|ref|ZP_13733034.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
gi|190900334|gb|EDV60173.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B7A]
gi|378019963|gb|EHV82743.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7C]
gi|378022067|gb|EHV84756.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC7D]
Length = 175
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLHKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|387131117|ref|YP_006294007.1| ssDNA-binding protein [Methylophaga sp. JAM7]
gi|386272406|gb|AFJ03320.1| Single-stranded DNA-binding protein [Methylophaga sp. JAM7]
Length = 157
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G++ P + NG ++ + T + R G + + +WHR+ + N+
Sbjct: 3 VNKVILVGRLGVDPESRAFPNGGSICNLRIATTESWRDRQSGERQ--ERTEWHRVVLRNK 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
LG A + L K S VY+EG I+ R + D NG+ + EI
Sbjct: 61 -LGEIAQQYLRKGSQVYIEGRIQTRKWQDQ-NGQDRYTTEI 99
>gi|261494885|ref|ZP_05991359.1| bifunctional single-stranded DNA-binding protein/integrase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309460|gb|EEY10689.1| bifunctional single-stranded DNA-binding protein/integrase
[Mannheimia haemolytica serotype A2 str. OVINE]
Length = 152
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHR-IAVH 141
GV+KAI+ G++ + P + + NG +V SV T + ++ G K + +WH IA
Sbjct: 3 GVNKAIVVGRLGNDPEMRTMPNGDSVAKISVATSTEWTDKVSGDKK--QATEWHSIIAFR 60
Query: 142 N--EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N +I+G Y L K S VYVEG + R +
Sbjct: 61 NLADIIGKY----LKKGSQVYVEGKLRTRKW 87
>gi|301030004|ref|ZP_07192975.1| single-strand binding family protein [Escherichia coli MS 196-1]
gi|299877219|gb|EFI85430.1| single-strand binding family protein [Escherichia coli MS 196-1]
Length = 188
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|294637733|ref|ZP_06716008.1| single-strand binding protein [Edwardsiella tarda ATCC 23685]
gi|451966588|ref|ZP_21919840.1| single-stranded DNA-binding protein [Edwardsiella tarda NBRC
105688]
gi|291089081|gb|EFE21642.1| single-strand binding protein [Edwardsiella tarda ATCC 23685]
gi|451314505|dbj|GAC65202.1| single-stranded DNA-binding protein [Edwardsiella tarda NBRC
105688]
Length = 184
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSESWRDKQTGEQK--ERTEWHRVALY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VYVEG + R + D +G+ + E+ + +G+
Sbjct: 62 GKLAEIAGEY----LRKGSQVYVEGQLRTRKWQDQ-SGQDRYTTEVVVDINGS 109
>gi|387604960|ref|YP_006099229.1| single-stranded DNA-binding protein [Escherichia coli 042]
gi|284924674|emb|CBG27865.1| single-stranded DNA-binding protein [Escherichia coli 042]
Length = 175
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEIRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|209884678|ref|YP_002288535.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|337741665|ref|YP_004633393.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
gi|386030681|ref|YP_005951456.1| ssDNA-binding protein [Oligotropha carboxidovorans OM4]
gi|209872874|gb|ACI92670.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|336095749|gb|AEI03575.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM4]
gi|336099329|gb|AEI07152.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
Length = 161
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 INKVILVGNLGADPDIRRTQDGRAIANMSIATSETWRDKNSGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K + VYVEG ++ R + D +G K E+ ++
Sbjct: 63 GLAKVAEQYLRKGAKVYVEGALQTRKWQDK-DGRDKYTTEVVLQ 105
>gi|251792764|ref|YP_003007490.1| single-stranded DNA-binding protein [Aggregatibacter aphrophilus
NJ8700]
gi|422336311|ref|ZP_16417284.1| single-stranded DNA-binding protein [Aggregatibacter aphrophilus
F0387]
gi|247534157|gb|ACS97403.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Aggregatibacter
aphrophilus NJ8700]
gi|353346497|gb|EHB90782.1| single-stranded DNA-binding protein [Aggregatibacter aphrophilus
F0387]
Length = 163
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNEPEMRTMPNGEAVANISVATSEAWIDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG ++ R + D NG+ + EI
Sbjct: 61 RQAEICGEY----LHKGSKVYIEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|86147857|ref|ZP_01066163.1| single-strand DNA-binding protein [Vibrio sp. MED222]
gi|218708363|ref|YP_002415984.1| single-stranded DNA-binding protein [Vibrio splendidus LGP32]
gi|85834384|gb|EAQ52536.1| single-strand DNA-binding protein [Vibrio sp. MED222]
gi|218321382|emb|CAV17332.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Vibrio splendidus LGP32]
Length = 185
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|416893423|ref|ZP_11924611.1| single-strand DNA-binding protein [Aggregatibacter aphrophilus ATCC
33389]
gi|347813977|gb|EGY30629.1| single-strand DNA-binding protein [Aggregatibacter aphrophilus ATCC
33389]
Length = 165
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + + NG+ V +V T ++ + G + + +WHRI +
Sbjct: 10 GVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERR--EVTEWHRIVFYR 67
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 68 RQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 107
>gi|227356904|ref|ZP_03841283.1| single-stranded DNA-binding protein [Proteus mirabilis ATCC 29906]
gi|227162974|gb|EEI47919.1| single-stranded DNA-binding protein [Proteus mirabilis ATCC 29906]
Length = 175
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K ++ G + P + L NG VT ++ T + + G + + V+WHR+ +
Sbjct: 4 KGVNKVLLIGHLGQDPEMRYLPNGDAVTNITLATSDSWKDKQSG--ETKERVEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S VY+EG ++ R + D NG+ + E+ + +G
Sbjct: 62 GKLAEIAGEY----LHKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVNING 108
>gi|148977873|ref|ZP_01814428.1| single-strand DNA-binding protein [Vibrionales bacterium SWAT-3]
gi|417950731|ref|ZP_12593849.1| single-stranded DNA-binding protein [Vibrio splendidus ATCC 33789]
gi|145962942|gb|EDK28213.1| single-strand DNA-binding protein [Vibrionales bacterium SWAT-3]
gi|342806193|gb|EGU41431.1| single-stranded DNA-binding protein [Vibrio splendidus ATCC 33789]
Length = 183
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|410085169|ref|ZP_11281889.1| Single-stranded DNA-binding protein [Morganella morganii SC01]
gi|409768378|gb|EKN52440.1| Single-stranded DNA-binding protein [Morganella morganii SC01]
Length = 172
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG VT ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTG--EMKEKTEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG ++ R + D +G+ + E+ +
Sbjct: 62 GKLAEIAGEY----LKKGSQVYIEGSLQTRKWQDQ-SGQERYTTEVVV 104
>gi|407792367|ref|ZP_11139430.1| single-strand binding protein [Gallaecimonas xiamenensis 3-C-1]
gi|407197332|gb|EKE67398.1| single-strand binding protein [Gallaecimonas xiamenensis 3-C-1]
Length = 227
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGS-KDLPKPVQWHRIAV 140
RG++K II G + P + + NG V F+V T + + G K+L +WHR+ +
Sbjct: 4 RGINKVIIVGNLGGDPEVRYMPNGNAVANFTVATSESWKDKQTGEQKEL---TEWHRMVI 60
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ EI G Y L K S VY+EG + R + +G+ K EI +
Sbjct: 61 YGRLAEIAGEY----LRKGSKVYLEGSLRTRKWQGQ-DGQDKYTTEIIV 104
>gi|323491664|ref|ZP_08096842.1| single-stranded DNA-binding protein [Vibrio brasiliensis LMG 20546]
gi|323314026|gb|EGA67112.1| single-stranded DNA-binding protein [Vibrio brasiliensis LMG 20546]
Length = 177
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGSDPEIRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-NGQDRYTTEVVVQ 105
>gi|421178639|ref|ZP_15636247.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|404548107|gb|EKA57076.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
Length = 157
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + + NG VT ++ T + + G + + +WHR+
Sbjct: 3 RGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQ--ERTEWHRVVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VYVEG + R + +G+ + EI + +GN
Sbjct: 61 GRLAEIAGEY----LRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGN 108
>gi|39935881|ref|NP_948157.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
CGA009]
gi|192291528|ref|YP_001992133.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
TIE-1]
gi|39649735|emb|CAE28256.1| single-strand DNA-binding protein [Rhodopseudomonas palustris
CGA009]
gi|192285277|gb|ACF01658.1| single-strand binding protein [Rhodopseudomonas palustris TIE-1]
Length = 167
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + + T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSESWRDRATGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L A + L K + VY+EG ++ R + D E
Sbjct: 63 GLCKVAEQYLRKGAKVYIEGQLQTRKWTDQSGAE 96
>gi|289209300|ref|YP_003461366.1| single-strand binding protein [Thioalkalivibrio sp. K90mix]
gi|288944931|gb|ADC72630.1| single-strand binding protein [Thioalkalivibrio sp. K90mix]
Length = 160
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P ++ NG TVT + T + + G K + +WHR+ +
Sbjct: 3 RGVNKVILLGNLGADPEKRETPNGVTVTNLRLATSEQWTDKNSGEK--RENTEWHRVVMF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG I+ R + D
Sbjct: 61 GR-LADIAAQYLSKGSQVYIEGKIQTRKWQD 90
>gi|302595315|ref|YP_003829030.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302310051|gb|ADL13924.1| Ssb [Escherichia coli]
Length = 214
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 39 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 96
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 97 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 143
>gi|240948729|ref|ZP_04753101.1| single-stranded DNA-binding protein [Actinobacillus minor NM305]
gi|240296945|gb|EER47523.1| single-stranded DNA-binding protein [Actinobacillus minor NM305]
Length = 175
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EITEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|58000347|ref|YP_190159.1| single-stranded DNA-binding protein [Escherichia coli]
gi|169546540|ref|YP_001711979.1| single-stranded DNA-binding protein [Escherichia coli]
gi|419218912|ref|ZP_13761889.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8D]
gi|422820413|ref|ZP_16868620.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|432561376|ref|ZP_19798020.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE51]
gi|433201150|ref|ZP_20385012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
gi|57903247|gb|AAW58877.1| single-stranded DNA binding protein [Escherichia coli]
gi|168831092|gb|ACA34873.1| Ssb [Escherichia coli]
gi|378055845|gb|EHW18105.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8D]
gi|385536087|gb|EIF82999.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli M919]
gi|431102903|gb|ELE07575.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE51]
gi|431714460|gb|ELJ78647.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE94]
Length = 179
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|378768967|ref|YP_005197442.1| ssDNA-binding protein [Pantoea ananatis LMG 5342]
gi|365188455|emb|CCF11405.1| Single-stranded DNA-binding protein [Pantoea ananatis LMG 5342]
Length = 184
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG VT SV T + + G + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGTAVTSLSVATSETWRDKQTGENR--EKTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S Y+EG + R + DS G + EI + +G
Sbjct: 62 GKLAEIAGEY----LRKGSQAYIEGKLRTREWQDS-EGTKRYTTEIVVDVNG 108
>gi|70952901|ref|XP_745587.1| single-strand binding protein [Plasmodium chabaudi chabaudi]
gi|56525957|emb|CAH81753.1| single-strand binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 275
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+ ++K + G+V P KIL G V FS+ T + R + +L WHR+ V+
Sbjct: 75 KSLNKITLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRVVVY 132
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRV-YNDSINGEVKNIPEICI 186
++ + K L K VY++G + R + + +N + + I EI +
Sbjct: 133 DQNIVDLIDKYLRKGRRVYIQGSLHTRKWFGNELNNQPRQITEIVL 178
>gi|420353034|ref|ZP_14854158.1| plasmid-derived single-stranded DNA-binding protein [Shigella
boydii 4444-74]
gi|391280142|gb|EIQ38817.1| plasmid-derived single-stranded DNA-binding protein [Shigella
boydii 4444-74]
Length = 175
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIFVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGKLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|384918031|ref|ZP_10018129.1| single stranded DNA-binding protein [Citreicella sp. 357]
gi|384468144|gb|EIE52591.1| single stranded DNA-binding protein [Citreicella sp. 357]
Length = 175
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPEVRSFQNGGKVCNLRIATSESWKDRNTGERR--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G + E+ +R
Sbjct: 63 PLARIAEQYLRKGSKVYIEGQLETRKWQDQ-SGADRYSTEVVLR 105
>gi|300724464|ref|YP_003713785.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
gi|297631002|emb|CBJ91684.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
Length = 170
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + L G TV S+ T + + G +L + +WHR+ +
Sbjct: 4 RGINKVILVGFLGQEPEIRYLPTGGTVATLSLATSENWKDKQTG--ELREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG ++ R + D+ G+ + E+ + +G+
Sbjct: 62 GK-LAEIAEEYLQKGTQVYIEGQLQTRKWQDN-QGQDRYSTEVVVNVNGS 109
>gi|209947525|ref|YP_002291022.1| single-stranded DNA-binding protein [Haemophilus influenzae]
gi|51507267|emb|CAF29016.1| single-strand binding protein [Haemophilus influenzae]
Length = 140
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH- 141
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRSMPNGEAVANISVATSEAWTDKNTGERR--EVTEWHRIVFYR 60
Query: 142 --NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+EI G Y L K + VY+EG + R + D NG+ + EI
Sbjct: 61 KLDEICGQY----LKKGAQVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|407069835|ref|ZP_11100673.1| single-stranded DNA-binding protein [Vibrio cyclitrophicus ZF14]
Length = 184
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|417262930|ref|ZP_12050391.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 2.3916]
gi|386223449|gb|EII45811.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 2.3916]
Length = 179
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWGD--NGITRYVTEILVKTTGT 108
>gi|244539408|dbj|BAH83451.1| single-strand DNA-binding protein [Candidatus Ishikawaella
capsulata Mpkobe]
Length = 171
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G + P + ++NG V ++ T + + G K +WHRI +
Sbjct: 4 RGINKVMLIGNLGQDPEVRYMQNGNLVVNINLATSETWRDKKTGEK--KDNTEWHRIVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D NG+ + EI + +G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWQDQ-NGKDRYTTEIVVGSNG 108
>gi|307261265|ref|ZP_07542940.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868996|gb|EFN00798.1| Single-stranded DNA-binding protein [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 174
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWMDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|149189060|ref|ZP_01867348.1| single-strand DNA-binding protein [Vibrio shilonii AK1]
gi|148837023|gb|EDL53972.1| single-strand DNA-binding protein [Vibrio shilonii AK1]
Length = 183
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|421494440|ref|ZP_15941788.1| SSB [Morganella morganii subsp. morganii KT]
gi|455737896|ref|YP_007504162.1| Single-stranded DNA-binding protein [Morganella morganii subsp.
morganii KT]
gi|400191302|gb|EJO24450.1| SSB [Morganella morganii subsp. morganii KT]
gi|455419459|gb|AGG29789.1| Single-stranded DNA-binding protein [Morganella morganii subsp.
morganii KT]
Length = 173
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG VT ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTG--EMKEKTEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG ++ R + D +G+ + E+ +
Sbjct: 62 GKLAEIAGEY----LKKGSQVYIEGSLQTRKWQDQ-SGQERYTTEVVV 104
>gi|420350514|ref|ZP_14851851.1| single-stranded DNA-binding protein, partial [Shigella boydii
4444-74]
gi|391294678|gb|EIQ52879.1| single-stranded DNA-binding protein, partial [Shigella boydii
4444-74]
Length = 156
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + L NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILIGHLGQDPEIRYLPNGGAVANLTLATSESWRDKQSG--EMKEQTEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VY+EG ++ R + D NG + E+ + +G
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLKTRKWFDQQNGVDRYATEVVVSVNGT 110
>gi|339021196|ref|ZP_08645305.1| single-strand DNA binding protein Ssb [Acetobacter tropicalis NBRC
101654]
gi|338751681|dbj|GAA08609.1| single-strand DNA binding protein Ssb [Acetobacter tropicalis NBRC
101654]
Length = 186
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRTSQSGMKIVSLTLATSDTWNDRQSGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K VY+EG ++ R + D +G+ + E+ + R
Sbjct: 63 RLADVAERFLRKGRKVYLEGALQTRKWTDQ-SGQERYTTEVIVER 106
>gi|134903|sp|P28043.2|SSB2_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 179
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGK--MREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|408374113|ref|ZP_11171803.1| single-stranded DNA-binding protein [Alcanivorax hongdengensis
A-11-3]
gi|407765998|gb|EKF74445.1| single-stranded DNA-binding protein [Alcanivorax hongdengensis
A-11-3]
Length = 173
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G VT + T + R G + + +WHR+
Sbjct: 3 RGVNKVILIGNLGADPETRFMPSGGAVTNIRLATSETWKDRQSGQ--MQERTEWHRVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N+ LG A + L K S VYVEG I R +
Sbjct: 61 NK-LGEIAGEYLKKGSKVYVEGSIRTRKW 88
>gi|407367965|ref|ZP_11114497.1| single-strand binding protein [Pseudomonas mandelii JR-1]
Length = 161
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 72 GVDPRRGWGF--RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDL 129
G +RG F RGV+K I+ G P K L NG VT S+ T + + G K
Sbjct: 24 GTPRKRGVIFMARGVNKVILVGTSGQVPEVKYLPNGNAVTNLSLATSEQWTDKQTGQKV- 82
Query: 130 PKPVQWHRIAVHN---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
+ +WHR+++ EI G Y +VK S VY+EG ++ R +
Sbjct: 83 -EKTEWHRVSLFGRVAEIAGEY----VVKGSQVYIEGKLQTREW 121
>gi|343517799|ref|ZP_08754795.1| single-stranded DNA-binding protein [Haemophilus pittmaniae HK 85]
gi|343394650|gb|EGV07197.1| single-stranded DNA-binding protein [Haemophilus pittmaniae HK 85]
Length = 161
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV-- 140
G++K II G + + P + + NG V SV T + R G + + +WHRI
Sbjct: 3 GINKVIIVGNLGNDPEVRTMPNGDAVANISVATSESWTDRNTGERR--EVTEWHRIVFFR 60
Query: 141 -HNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVCGEY----LRKGSQVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|15599428|ref|NP_252922.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO1]
gi|116052269|ref|YP_788887.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152984573|ref|YP_001346254.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PA7]
gi|218889439|ref|YP_002438303.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa LESB58]
gi|254237097|ref|ZP_04930420.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa C3719]
gi|254242904|ref|ZP_04936226.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 2192]
gi|355652583|ref|ZP_09056843.1| single-stranded DNA-binding protein [Pseudomonas sp. 2_1_26]
gi|386056767|ref|YP_005973289.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa M18]
gi|418588013|ref|ZP_13152031.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P1]
gi|418589213|ref|ZP_13153141.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P2]
gi|419756671|ref|ZP_14283016.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|420137309|ref|ZP_14645299.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CIG1]
gi|421151790|ref|ZP_15611392.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
14886]
gi|421157777|ref|ZP_15617122.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
25324]
gi|421165643|ref|ZP_15623963.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
700888]
gi|421172483|ref|ZP_15630253.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CI27]
gi|421178616|ref|ZP_15636226.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|421518782|ref|ZP_15965456.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO579]
gi|451982913|ref|ZP_21931211.1| Single-stranded DNA-binding protein [Pseudomonas aeruginosa 18A]
gi|730833|sp|P40947.3|SSB_PSEAE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|9950448|gb|AAG07620.1|AE004840_6 single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO1]
gi|483597|emb|CAA83688.1| single-stranded DNA binding protein [Pseudomonas aeruginosa]
gi|115587490|gb|ABJ13505.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126169028|gb|EAZ54539.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa C3719]
gi|126196282|gb|EAZ60345.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 2192]
gi|150959731|gb|ABR81756.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PA7]
gi|218769662|emb|CAW25422.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa LESB58]
gi|347303073|gb|AEO73187.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa M18]
gi|354823921|gb|EHF08184.1| single-stranded DNA-binding protein [Pseudomonas sp. 2_1_26]
gi|375041252|gb|EHS33962.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P1]
gi|375051975|gb|EHS44436.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
MPAO1/P2]
gi|384396426|gb|EIE42844.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PADK2_CF510]
gi|403249955|gb|EJY63421.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CIG1]
gi|404348264|gb|EJZ74613.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO579]
gi|404526662|gb|EKA36864.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
14886]
gi|404537749|gb|EKA47332.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa CI27]
gi|404541096|gb|EKA50469.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
700888]
gi|404548220|gb|EKA57184.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa E2]
gi|404550302|gb|EKA59063.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa ATCC
25324]
gi|451759382|emb|CCQ83734.1| Single-stranded DNA-binding protein [Pseudomonas aeruginosa 18A]
gi|453042411|gb|EME90155.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa
PA21_ST175]
Length = 165
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + + NG VT ++ T + + G + + +WHR+
Sbjct: 3 RGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQ--ERTEWHRVVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VYVEG + R + +G+ + EI + +GN
Sbjct: 61 GRLAEIAGEY----LRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGN 108
>gi|339503508|ref|YP_004690928.1| single-stranded DNA-binding protein (SSB) [Roseobacter litoralis
Och 149]
gi|338757501|gb|AEI93965.1| single-stranded DNA-binding protein (SSB) [Roseobacter litoralis
Och 149]
Length = 167
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + + G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDKNTGERK--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S +YVEG +E R + D +G+ K E+ +R
Sbjct: 63 PLVRVAEQYLRKGSKIYVEGQLETRKWQDQ-SGQDKYSTEVVLR 105
>gi|192360087|ref|YP_001981237.1| single-stranded DNA-binding protein [Cellvibrio japonicus Ueda107]
gi|190686252|gb|ACE83930.1| single-stranded DNA-binding protein [Cellvibrio japonicus Ueda107]
Length = 235
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P K + +G VT SV T + + G + +WHR+ +
Sbjct: 42 RGINKVILIGNIGQDPEVKYMPSGGAVTNISVATSETWKDKNTGQAQ--ERTEWHRVVLF 99
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N LG A + L K S VY+EG + R +
Sbjct: 100 NR-LGEIAGEYLRKGSKVYIEGSLRTRKW 127
>gi|149915043|ref|ZP_01903572.1| single-strand binding protein [Roseobacter sp. AzwK-3b]
gi|149811231|gb|EDM71068.1| single-strand binding protein [Roseobacter sp. AzwK-3b]
Length = 184
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I G + P + +NG V S+ T + + G + + +WHR+A+ E
Sbjct: 5 LNKVQIIGHLGRDPEVRTFQNGGGVCNLSIATTETWKDKNTGQRQ--ERTEWHRVAIFTE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 63 PLVRLAEQYLRKGSKVYIEGKLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|432867524|ref|ZP_20089207.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE147]
gi|431412031|gb|ELG95121.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE147]
Length = 179
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|16763010|ref|NP_458627.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144497|ref|NP_807839.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161420|ref|ZP_03347130.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213428139|ref|ZP_03360889.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213609821|ref|ZP_03369647.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646761|ref|ZP_03376814.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224586099|ref|YP_002639898.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|378962424|ref|YP_005219910.1| ssDNA-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|37999807|sp|Q9RHF4.1|SSB2_SALTI RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
AltName: Full=Helix-destabilizing protein 2
gi|25294300|pir||AB1027 single strand binding protein [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|6513859|gb|AAF14810.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|16505317|emb|CAD09315.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29140135|gb|AAO71699.1| single strand binding protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|32454454|gb|AAP83026.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C]
gi|224470627|gb|ACN48457.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|374356296|gb|AEZ48057.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 178
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + + NG V S+ T + + G K + +WHR+ ++
Sbjct: 4 KGVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKK--ERTEWHRVVLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + + G
Sbjct: 62 GK-LAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGT 109
>gi|331652609|ref|ZP_08353620.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli M718]
gi|331049715|gb|EGI21781.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli M718]
Length = 192
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|422334990|ref|ZP_16415993.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
gi|373244046|gb|EHP63540.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4_1_47FAA]
Length = 153
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|452877854|ref|ZP_21955103.1| single-stranded DNA-binding protein, partial [Pseudomonas
aeruginosa VRFPA01]
gi|452185410|gb|EME12428.1| single-stranded DNA-binding protein, partial [Pseudomonas
aeruginosa VRFPA01]
Length = 137
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + + NG VT ++ T + + G + + +WHR+
Sbjct: 3 RGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQ--ERTEWHRVVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VYVEG + R + +G+ + EI + +GN
Sbjct: 61 GRLAEIAGEY----LRKGSQVYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGN 108
>gi|257465511|ref|ZP_05629882.1| single-stranded DNA-binding protein [Actinobacillus minor 202]
gi|257451171|gb|EEV25214.1| single-stranded DNA-binding protein [Actinobacillus minor 202]
Length = 175
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNTGERR--EITEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGQY----LRKGSQVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|227555|prf||1706408C ssDNA binding protein
Length = 178
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G + + +WHR+ +
Sbjct: 3 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTGK--MREQTEWHRVVLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 61 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 107
>gi|419287571|ref|ZP_13829699.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11A]
gi|419292827|ref|ZP_13834902.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|433133062|ref|ZP_20318453.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
gi|378137550|gb|EHW98825.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11A]
gi|378149423|gb|EHX10547.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC11B]
gi|431638559|gb|ELJ06591.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
Length = 150
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|327412812|emb|CAX67818.1| single strand binding protein [Salmonella bongori]
Length = 178
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + + NG V S+ T + + G K + +WHR+ ++
Sbjct: 4 KGVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKK--ERTEWHRVVLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + + G
Sbjct: 62 GK-LAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGT 109
>gi|331004906|ref|ZP_08328322.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC1989]
gi|330421293|gb|EGG95543.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC1989]
Length = 188
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I G + + P K + +G VT SV T + + G + +WHRI
Sbjct: 3 RGINKVTIVGNLGNDPEVKYMPSGGAVTNISVATSESWKDKQTGQPQ--ERTEWHRIVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N EI G Y L K S VYVEG + R + D +G+ + EI
Sbjct: 61 NRLAEIAGEY----LKKGSQVYVEGSLRTRKWQDQ-SGQDRYTTEIV 102
>gi|88658209|ref|YP_507611.1| single-strand binding protein [Ehrlichia chaffeensis str. Arkansas]
gi|88599666|gb|ABD45135.1| single-strand binding protein [Ehrlichia chaffeensis str. Arkansas]
Length = 157
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P ++++NGK + FS+ T + + G + + +WH + V N
Sbjct: 5 GVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMR--TEKTEWHNVVVFN 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
E L + K S +Y+EG + R + D N
Sbjct: 63 EGLVKIIKNCIRKGSKIYIEGSLRTRKWTDQNN 95
>gi|409201270|ref|ZP_11229473.1| single-stranded DNA-binding protein [Pseudoalteromonas flavipulchra
JG1]
Length = 217
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V S+ T + + G L + +WHR+ +
Sbjct: 3 RGVNKVILVGNLGQDPEVRYMPNGNGVANISIATTDSWKDKNTGQ--LQERTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D +G+ K EI + G
Sbjct: 61 GK-LAEVAGEYLRKGSQVYIEGRLQTRKWTDQ-SGQEKYTTEIVVDMGG 107
>gi|392543328|ref|ZP_10290465.1| single-stranded DNA-binding protein [Pseudoalteromonas piscicida
JCM 20779]
Length = 217
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V S+ T + + G L + +WHR+ +
Sbjct: 3 RGVNKVILVGNLGQDPEVRYMPNGNGVANISIATTDSWKDKNTGQ--LQERTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D +G+ K EI + G
Sbjct: 61 GK-LAEVAGEYLRKGSQVYIEGRLQTRKWTDQ-SGQEKYTTEIVVDMGG 107
>gi|71891820|ref|YP_277549.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71795926|gb|AAZ40677.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 163
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + +G VT SV T + + + + + +WHR+ +
Sbjct: 9 RGINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDK--QTNEFKEKTEWHRVVLF 66
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + + NG+ + I EI + G
Sbjct: 67 GK-LAEIASEYLHKGSQVYIEGSLKTRKWQNQ-NGQDRYITEIIVNIGG 113
>gi|134904|sp|P28044.2|SSB7_ECOLX RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
Length = 175
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|260751871|ref|YP_003237785.1| putative single-strand DNA-binding protein Ssb [Escherichia coli
O111:H- str. 11128]
gi|415817200|ref|ZP_11507443.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli OK1180]
gi|417196792|ref|ZP_12016185.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
gi|419200667|ref|ZP_13743927.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8A]
gi|257767863|dbj|BAI39355.1| putative single-strand DNA-binding protein Ssb [Escherichia coli
O111:H- str. 11128]
gi|323181095|gb|EFZ66630.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli OK1180]
gi|378039066|gb|EHW01570.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8A]
gi|386188982|gb|EIH77766.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0522]
Length = 175
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|110598256|ref|ZP_01386532.1| single-strand binding protein [Chlorobium ferrooxidans DSM 13031]
gi|110340171|gb|EAT58670.1| single-strand binding protein [Chlorobium ferrooxidans DSM 13031]
Length = 185
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G++ PV + TV F++ T F + GSK + +WH IAV
Sbjct: 19 RGLNKVMLIGRLGKDPVSRQA-GSNTVCNFTIATSETF-KDAQGSKQ--ERTEWHNIAVW 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
LG + L K VY+EG ++ R ++D +GE K +I
Sbjct: 75 GR-LGEICQQYLTKGREVYIEGKLQTRSWDDPKSGEKKYATDI 116
>gi|32470104|ref|NP_863047.1| single-stranded DNA-binding protein [Escherichia coli]
gi|58383257|ref|YP_194827.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|170650901|ref|YP_001739944.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli SMS-3-5]
gi|310286500|ref|YP_003937761.1| single-stranded DNA-binding protein [Escherichia coli]
gi|410651668|ref|YP_006954789.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin]
gi|415773145|ref|ZP_11485851.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|415775117|ref|ZP_11487105.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|417210578|ref|ZP_12021153.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli JB1-95]
gi|417250488|ref|ZP_12042270.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0967]
gi|418832021|ref|ZP_13386969.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|419140328|ref|ZP_13685097.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC5E]
gi|419213018|ref|ZP_13756067.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8C]
gi|419342698|ref|ZP_13884143.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|420108004|ref|ZP_14618306.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|425382963|ref|ZP_18766906.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|432915668|ref|ZP_20120898.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE190]
gi|433021740|ref|ZP_20209794.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE105]
gi|450233978|ref|ZP_21898323.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
gi|28629361|gb|AAO49641.1| Ssb [Escherichia coli]
gi|37962736|gb|AAR05683.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|170522177|gb|ACB20354.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli SMS-3-5]
gi|308826829|emb|CBX36102.1| single-stranded DNA-binding protein [Escherichia coli]
gi|315617925|gb|EFU98520.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|315619250|gb|EFU99826.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 3431]
gi|327536661|gb|AEA95493.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Dublin]
gi|377976577|gb|EHV39883.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC5E]
gi|378045684|gb|EHW08077.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC8C]
gi|378181176|gb|EHX41849.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC12E]
gi|386195888|gb|EIH90122.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli JB1-95]
gi|386219390|gb|EII35856.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 4.0967]
gi|392798272|gb|EJA54551.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|394411356|gb|EJE85617.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|408291338|gb|EKJ09971.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|409924829|gb|AFV47303.1| single strand DNA binding protein [uncultured bacterium]
gi|431434692|gb|ELH16338.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE190]
gi|431524874|gb|ELI01697.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE105]
gi|449311546|gb|EMD01903.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
Length = 175
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|21674759|ref|NP_662824.1| single-strand binding protein [Chlorobium tepidum TLS]
gi|37999707|sp|Q8KB47.1|SSB1_CHLTE RecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1;
AltName: Full=Helix-destabilizing protein 1
gi|21647972|gb|AAM73166.1| single-strand binding protein [Chlorobium tepidum TLS]
Length = 162
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G + + P ++ +G++V F++ T F S +L + +WHRI
Sbjct: 3 RGLNKVMLIGHLGNDPERRETASGQSVVNFTLATSEGFKD---SSGNLQERTEWHRIVAW 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ L + L K VY+EG ++ R ++D+ G+ K EI
Sbjct: 60 GK-LADICSQYLKKGRQVYIEGRLQTRSWDDNKTGDKKYATEI 101
>gi|213422780|ref|ZP_03355823.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 176
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + + NG V S+ T + + G K + +WHR+ ++
Sbjct: 2 KGVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKK--ERTEWHRVVLY 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + + G
Sbjct: 60 GK-LAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGT 107
>gi|83310598|ref|YP_420862.1| single-stranded DNA-binding protein [Magnetospirillum magneticum
AMB-1]
gi|82945439|dbj|BAE50303.1| Single-stranded DNA-binding protein [Magnetospirillum magneticum
AMB-1]
Length = 193
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+KAI+ G + P + ++G + ++ T + R G + + +WHR+ + N
Sbjct: 5 VNKAILVGHLGRDPEVRTGQDGSKIVNLNIATSETWKDRGTGERK--EKTEWHRVVIFNP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VYVEG I+ R + D
Sbjct: 63 NLAEVAERFLKKGSPVYVEGQIQTRKWTD 91
>gi|357032124|ref|ZP_09094064.1| single-strand DNA binding protein [Gluconobacter morbifer G707]
gi|356414351|gb|EHH67998.1| single-strand DNA binding protein [Gluconobacter morbifer G707]
Length = 183
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + +V T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGRDPEVRNTQSGTKIVNLTVATSDTWNDRQSGER--RERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
A + L K VY+EG++ R + D +G+ K E+ I R
Sbjct: 63 RTADVAERFLRKGRKVYIEGELRTRKWTDQ-SGQEKYTTEVVIDR 106
>gi|193070216|ref|ZP_03051161.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|417665125|ref|ZP_12314702.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|432658713|ref|ZP_19894394.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE111]
gi|192956535|gb|EDV86993.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E110019]
gi|330907838|gb|EGH36363.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|431205871|gb|ELF04310.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE111]
Length = 179
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|146340931|ref|YP_001205979.1| single-stranded DNA-binding protein [Bradyrhizobium sp. ORS 278]
gi|146193737|emb|CAL77754.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 278]
Length = 165
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNTGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S+VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGSTVYIEGALQTRKWTD 91
>gi|90020643|ref|YP_526470.1| single-stranded DNA-binding protein [Saccharophagus degradans 2-40]
gi|89950243|gb|ABD80258.1| single-strand binding protein [Saccharophagus degradans 2-40]
Length = 175
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II G + P K +G +T S+ T + + G + +WHR+
Sbjct: 4 RGVNKVIIVGNLGQDPETKYTASGAAITNVSIATSETWKDKQTGQAQ--ERTEWHRVVFF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N EI G Y L K S VY+EG + R + D G+ + EI
Sbjct: 62 NRLAEIAGEY----LRKGSKVYIEGALRTRKWQDQ-GGQDRYTTEIV 103
>gi|417241971|ref|ZP_12037633.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 9.0111]
gi|417665165|ref|ZP_12314737.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_O31]
gi|386211829|gb|EII22281.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 9.0111]
gi|397787258|gb|EJK98084.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli STEC_O31]
Length = 173
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|419812773|ref|ZP_14337635.1| single-stranded DNA-binding protein [Escherichia coli O32:H37 str.
P4]
gi|385154333|gb|EIF16347.1| single-stranded DNA-binding protein [Escherichia coli O32:H37 str.
P4]
Length = 136
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|9507773|ref|NP_061439.1| single-strand DNA binding protein [Escherichia coli K-12]
gi|417290444|ref|ZP_12077726.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B41]
gi|419808024|ref|ZP_14332994.1| single-stranded DNA-binding protein [Escherichia coli AI27]
gi|422764286|ref|ZP_16818037.1| single-strand binding protein [Escherichia coli E1167]
gi|134905|sp|P18310.3|SSBF_ECOLI RecName: Full=Plasmid-derived single-stranded DNA-binding protein;
Short=SSB; AltName: Full=Helix-destabilizing protein
gi|1107472|gb|AAA83020.1| single stranded DNA binding protein [Plasmid F]
gi|8918883|dbj|BAA97930.1| single-strand DNA binding protein [Escherichia coli K-12]
gi|324115783|gb|EGC09717.1| single-strand binding protein [Escherichia coli E1167]
gi|384468973|gb|EIE53214.1| single-stranded DNA-binding protein [Escherichia coli AI27]
gi|386255296|gb|EIJ04985.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli B41]
Length = 179
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|73666895|ref|YP_302911.1| single-strand binding protein [Ehrlichia canis str. Jake]
gi|72394036|gb|AAZ68313.1| single-strand binding protein [Ehrlichia canis str. Jake]
Length = 157
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P ++++NGK + FS+ T + + G + + +WH I V N
Sbjct: 5 GVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKTSGIR--TEKTEWHNIVVFN 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
E L + K S +Y+EG + R + D N
Sbjct: 63 EGLVKIIKNCVRKGSKIYIEGSLRTRKWTDQNN 95
>gi|407697576|ref|YP_006822364.1| ssDNA-binding protein [Alcanivorax dieselolei B5]
gi|407254914|gb|AFT72021.1| Single-stranded DNA-binding protein [Alcanivorax dieselolei B5]
Length = 170
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G VT + T + R G + + +WHR+
Sbjct: 3 RGVNKVILIGNLGADPETRFMPSGGAVTNVRLATSETWKDRQTGQ--MQERTEWHRVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N+ LG A + L K S VY+EG I R +
Sbjct: 61 NK-LGEIAGEYLKKGSKVYIEGSIRTRKW 88
>gi|386622275|ref|YP_006141855.1| ssDNA-binding protein [Escherichia coli NA114]
gi|333972776|gb|AEG39581.1| Single-stranded DNA-binding protein [Escherichia coli NA114]
Length = 173
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|338974410|ref|ZP_08629771.1| single-stranded DNA-binding protein [Bradyrhizobiaceae bacterium
SG-6C]
gi|414166750|ref|ZP_11422982.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
gi|338232497|gb|EGP07626.1| single-stranded DNA-binding protein [Bradyrhizobiaceae bacterium
SG-6C]
gi|410892594|gb|EKS40386.1| single-stranded DNA-binding protein [Afipia clevelandensis ATCC
49720]
Length = 161
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + SV T + R G + + +WHR+ + +E
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLSVATSETWRDRNTGER--KEKTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG ++ R + D
Sbjct: 63 GLCKIAEQYLKKGSKVYLEGQLQTRKWQD 91
>gi|366160806|ref|ZP_09460668.1| single-stranded DNA-binding protein [Escherichia sp. TW09308]
Length = 179
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVVLIGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|343495923|ref|ZP_08734032.1| single-stranded DNA-binding protein [Vibrio nigripulchritudo ATCC
27043]
gi|342822049|gb|EGU56808.1| single-stranded DNA-binding protein [Vibrio nigripulchritudo ATCC
27043]
Length = 180
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYTTEVVVQ 105
>gi|395837374|ref|XP_003791611.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Otolemur garnettii]
Length = 148
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDSEVYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 124
>gi|386283122|ref|ZP_10060756.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
sp. 4_1_40B]
gi|386119803|gb|EIG68446.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
sp. 4_1_40B]
Length = 173
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ + P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGNDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|240850481|ref|YP_002971880.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267604|gb|ACS51192.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 151
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G++ P K + +G + FS+ T + + K + +WH + + N
Sbjct: 2 LNKVTLIGRLGANPESKTMNSGAEIVNFSIATSESYTDKKTNQK--VEKTEWHSVVIFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K S VYVEG ++ R + D NG + EI +
Sbjct: 60 HLAKIALQYLNKGSKVYVEGKLQTRKWQDK-NGHERYTTEIVL 101
>gi|170676317|ref|YP_001742078.1| bacterial type single-stranded DNA-binding protein [Salmonella
phage E1]
gi|170321627|emb|CAM33146.1| bacterial type single-stranded DNA-binding protein [Salmonella
phage Vi II-E1]
Length = 161
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II G + + P K +G + SV T + + G K + +WHR+ +
Sbjct: 3 RGVNKVIIVGTLGNDPEVKYSASGSAIANLSVATSEQWKDKQTGEKK--EHTEWHRVVIF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+I A + L K S VY+EG + R + DS +G K EI I + G
Sbjct: 61 GKI-AEVAGEYLRKGSQVYIEGQLRTRKWTDS-SGVDKYTTEIVIPQMG 107
>gi|5702178|gb|AAD47187.1| single stranded DNA binding protein [Escherichia coli]
Length = 179
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|387930299|gb|AFK11692.1| single-stranded DNA-binding protein [Gallibacterium anatis]
Length = 171
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + NG V SV T + + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPELRTFANGDAVANISVATSERWQDKQSG--EWREITEWHRIVLFR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG + R + D NG+ + EI
Sbjct: 61 RLAEIAGQY----LRKGSKVYIEGKLRTRKWQDQ-NGQDRYTTEI 100
>gi|410691812|ref|YP_006970928.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|410691941|ref|YP_006971056.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|301130358|gb|ADK62159.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
gi|301130486|gb|ADK62286.1| single-stranded DNA binding protein Ssb [Salmonella enterica subsp.
enterica serovar Kentucky]
Length = 287
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 81 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 138
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 139 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 185
>gi|254511058|ref|ZP_05123125.1| single-strand binding protein [Rhodobacteraceae bacterium KLH11]
gi|221534769|gb|EEE37757.1| single-strand binding protein [Rhodobacteraceae bacterium KLH11]
Length = 160
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERR--ERTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VYVEG ++ R + D
Sbjct: 63 GLVRVAEQYLRKGSKVYVEGQLQTRKWQD 91
>gi|227554|prf||1706408B ssDNA binding protein
Length = 174
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 3 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 61 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 107
>gi|422837093|ref|ZP_16885118.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E101]
gi|371605367|gb|EHN93983.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli E101]
Length = 177
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREHTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|52424640|ref|YP_087777.1| single-stranded DNA-binding protein [Mannheimia succiniciproducens
MBEL55E]
gi|52306692|gb|AAU37192.1| Ssb protein [Mannheimia succiniciproducens MBEL55E]
Length = 161
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEIRTMPNGEAVANISVATSESWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSQVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|419283080|ref|ZP_13825283.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10F]
gi|378136882|gb|EHW98166.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC10F]
Length = 179
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGECLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKATGT 108
>gi|258626996|ref|ZP_05721794.1| single-strand binding protein [Vibrio mimicus VM603]
gi|449143839|ref|ZP_21774660.1| ssDNA-binding protein [Vibrio mimicus CAIM 602]
gi|258580670|gb|EEW05621.1| single-strand binding protein [Vibrio mimicus VM603]
gi|449080494|gb|EMB51407.1| ssDNA-binding protein [Vibrio mimicus CAIM 602]
Length = 177
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQ 105
>gi|251788330|ref|YP_003003051.1| single-strand binding protein [Dickeya zeae Ech1591]
gi|247536951|gb|ACT05572.1| single-strand binding protein [Dickeya zeae Ech1591]
Length = 182
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQK--ERTEWHRVALY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG + R + D G+ + E+ +
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVV 104
>gi|398884989|ref|ZP_10639912.1| single stranded DNA-binding protein [Pseudomonas sp. GM60]
gi|398193269|gb|EJM80379.1| single stranded DNA-binding protein [Pseudomonas sp. GM60]
Length = 179
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|365846177|ref|ZP_09386682.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
gi|364574289|gb|EHM51754.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
Length = 174
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K EI + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEIVVNVGGT 109
>gi|419352847|ref|ZP_13894147.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13C]
gi|419363171|ref|ZP_13904367.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13D]
gi|378195761|gb|EHX56254.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13D]
gi|378211196|gb|EHX71538.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC13C]
Length = 175
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|323669651|emb|CBJ94773.1| single strand binding protein [Salmonella bongori]
Length = 178
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + + NG V S+ T + + G K + +WHR+ ++
Sbjct: 4 KGVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKK--ERTEWHRVVLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + + G
Sbjct: 62 GK-LAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGT 109
>gi|119358075|ref|YP_912719.1| single-strand binding protein [Chlorobium phaeobacteroides DSM 266]
gi|119355424|gb|ABL66295.1| single-strand binding protein [Chlorobium phaeobacteroides DSM 266]
Length = 171
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+G++K ++ G + P + +G+TVT F++ T F + + +WHRI
Sbjct: 3 KGLNKVMLIGHLGGDPESRNTASGQTVTNFTLATTESFKD---ATGTWQEKTEWHRIVTW 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ L + L K VYVEG ++ R ++D +GE K EI
Sbjct: 60 GK-LAEICSQYLKKGRQVYVEGRLQTRSWDDQKSGEKKYTTEI 101
>gi|389681721|ref|ZP_10173065.1| single-strand DNA-binding protein [Pseudomonas chlororaphis O6]
gi|425901849|ref|ZP_18878440.1| single-strand DNA-binding protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|388554256|gb|EIM17505.1| single-strand DNA-binding protein [Pseudomonas chlororaphis O6]
gi|397892802|gb|EJL09278.1| single-strand DNA-binding protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 170
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|307132498|ref|YP_003884514.1| ssDNA-binding protein [Dickeya dadantii 3937]
gi|306530027|gb|ADM99957.1| Single-stranded DNA-binding protein [Dickeya dadantii 3937]
Length = 181
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQK--ERTEWHRVALY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG + R + D G+ + E+ +
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVV 104
>gi|163851666|ref|YP_001639709.1| single-strand binding protein [Methylobacterium extorquens PA1]
gi|218530472|ref|YP_002421288.1| single-strand binding protein [Methylobacterium extorquens CM4]
gi|163663271|gb|ABY30638.1| single-strand binding protein [Methylobacterium extorquens PA1]
gi|218522775|gb|ACK83360.1| single-strand binding protein [Methylobacterium extorquens CM4]
Length = 189
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH + ++N+
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGER--KEKTEWHSVVIYND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R + D +G K E+ ++R
Sbjct: 63 NLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQR 106
>gi|145639529|ref|ZP_01795133.1| single-strand DNA-binding protein [Haemophilus influenzae PittII]
gi|145271320|gb|EDK11233.1| single-strand DNA-binding protein [Haemophilus influenzae PittII]
Length = 140
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRSMPNGEAVANISVATSEAWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K + VY+EG + R + D NG+ + EI
Sbjct: 61 KLAEICGQY----LKKGAQVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|68171130|ref|ZP_00544539.1| Single-strand binding protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67999455|gb|EAM86095.1| Single-strand binding protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 170
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P ++++NGK + FS+ T + + G + + +WH + V N
Sbjct: 18 GVNKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKASGMR--TEKTEWHNVVVFN 75
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
E L + K S +Y+EG + R + D N
Sbjct: 76 EGLVKIIKNCIRKGSKIYIEGSLRTRKWTDQNN 108
>gi|402702960|ref|ZP_10850939.1| single-stranded DNA-binding protein [Rickettsia helvetica C9P9]
Length = 152
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|262164151|ref|ZP_06031890.1| single-stranded DNA-binding protein [Vibrio mimicus VM223]
gi|262172511|ref|ZP_06040189.1| single-stranded DNA-binding protein [Vibrio mimicus MB-451]
gi|261893587|gb|EEY39573.1| single-stranded DNA-binding protein [Vibrio mimicus MB-451]
gi|262027679|gb|EEY46345.1| single-stranded DNA-binding protein [Vibrio mimicus VM223]
Length = 177
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQ 105
>gi|410652582|ref|YP_006955863.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Pullorum]
gi|438145718|ref|ZP_20875876.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|378829608|gb|AFC61100.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Pullorum]
gi|434938784|gb|ELL45697.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
Length = 118
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + R+ ++ + +WHR+ V
Sbjct: 4 RGVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETW--RVRQDGEMREHTEWHRVVVF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI--RRDGNS 192
+ L A + L K + VY+EG + R + D +G+ K E+ + RR G++
Sbjct: 62 GK-LAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVIVNGRRSGDA 112
>gi|194437892|ref|ZP_03069986.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
gi|194423113|gb|EDX39106.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
Length = 173
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQFRTRSWED--NGITRYVTEILVKTTGT 108
>gi|433051032|ref|ZP_20238310.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE120]
gi|431558624|gb|ELI32235.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE120]
Length = 179
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|58039355|ref|YP_191319.1| single-strand DNA binding protein [Gluconobacter oxydans 621H]
gi|58001769|gb|AAW60663.1| Single-strand DNA binding protein [Gluconobacter oxydans 621H]
Length = 188
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + +V T ++ + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRNTQSGAKIVNLTVATSDTWNDKQSGER--KERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
A + L K VY+EG++ R + D +G+ K E+ I R
Sbjct: 63 RTADVAERYLRKGRKVYIEGELRTRKWTDQ-SGQEKYTTEVVIDR 106
>gi|425281120|ref|ZP_18672274.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
gi|408194619|gb|EKI20087.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
Length = 175
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPDVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|398935316|ref|ZP_10666404.1| single stranded DNA-binding protein [Pseudomonas sp. GM41(2012)]
gi|398169802|gb|EJM57772.1| single stranded DNA-binding protein [Pseudomonas sp. GM41(2012)]
Length = 176
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|189347623|ref|YP_001944152.1| single-strand binding protein [Chlorobium limicola DSM 245]
gi|189341770|gb|ACD91173.1| single-strand binding protein [Chlorobium limicola DSM 245]
Length = 165
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+G++K ++ G + + P + +G++V+ F+V T F +D +WHRI
Sbjct: 3 KGLNKVMLIGHLGNDPELRTTASGQSVSNFTVATSENFKDATGNWQDR---TEWHRIVAW 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ L + L K VY+EG ++ R ++DS +GE + EI
Sbjct: 60 GK-LAEICNQYLKKGRQVYIEGRLQTRSWDDSKSGEKRYATEI 101
>gi|67459717|ref|YP_247341.1| single-stranded DNA-binding protein [Rickettsia felis URRWXCal2]
gi|75535892|sp|Q4UJW3.1|SSB_RICFE RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|67005250|gb|AAY62176.1| Single-stranded DNA-binding protein [Rickettsia felis URRWXCal2]
Length = 152
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|359407575|ref|ZP_09200052.1| single stranded DNA-binding protein [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356677614|gb|EHI49958.1| single stranded DNA-binding protein [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 165
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILLGNLGRDPEVRSTQDGTKIVNLNIATSERWKDRNSGEQR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S+VY+EG ++ R + D G K E+ ++R
Sbjct: 63 NLARIAEQYLRKGSTVYLEGQLQTRKWTDQ-QGVEKYTTEVVLQR 106
>gi|162148105|ref|YP_001602566.1| single-stranded DNA-binding protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786682|emb|CAP56265.1| Single-stranded DNA-binding protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 198
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + G + ++ T ++ R G + + +WHR+ + NE
Sbjct: 19 VNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASGERR--ERTEWHRVVIFNE 76
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K VY+EG ++ R + D +G+ + E+ I R
Sbjct: 77 RLADVAERFLRKGRKVYLEGTLQTRKWTDQ-SGQERYTTEVVIDR 120
>gi|399006310|ref|ZP_10708837.1| single stranded DNA-binding protein [Pseudomonas sp. GM17]
gi|398122476|gb|EJM12068.1| single stranded DNA-binding protein [Pseudomonas sp. GM17]
Length = 170
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|68248644|ref|YP_247756.1| single-stranded DNA-binding protein [Haemophilus influenzae
86-028NP]
gi|229847012|ref|ZP_04467118.1| single-strand DNA-binding protein [Haemophilus influenzae 7P49H1]
gi|378696164|ref|YP_005178122.1| ssDNA-binding protein [Haemophilus influenzae 10810]
gi|68056843|gb|AAX87096.1| Single-strand binding protein [Haemophilus influenzae 86-028NP]
gi|229810096|gb|EEP45816.1| single-strand DNA-binding protein [Haemophilus influenzae 7P49H1]
gi|301168687|emb|CBW28278.1| Single-strand binding protein [Haemophilus influenzae 10810]
gi|309750586|gb|ADO80570.1| single-stranded DNA-binding protein [Haemophilus influenzae R2866]
Length = 140
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRSMPNGEAVANISVATSEAWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K + VY+EG + R + D NG+ + EI
Sbjct: 61 KLAEICGQY----LKKGAQVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|83858661|ref|ZP_00952183.1| Single-strand binding protein (ssb) [Oceanicaulis sp. HTCC2633]
gi|83853484|gb|EAP91336.1| Single-strand binding protein (ssb) [Oceanicaulis sp. HTCC2633]
Length = 171
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L NG V + T + + G + + +WH + + N+
Sbjct: 5 VNKVILVGNLGADPEVRRLNNGDPVVNLRIATSENWRDKATGER--REKTEWHNVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A L K S VY+EG ++ R + D +G K E+ ++R
Sbjct: 63 NLAKVAENYLKKGSKVYIEGQLQTRKWQDR-DGNDKYTTEVVLQR 106
>gi|157826305|ref|YP_001494025.1| single-stranded DNA-binding protein [Rickettsia akari str.
Hartford]
gi|157800263|gb|ABV75517.1| single-strand DNA-binding protein [Rickettsia akari str. Hartford]
Length = 152
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVAKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|433186510|ref|ZP_20370708.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE85]
gi|431698107|gb|ELJ63170.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE85]
Length = 175
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRSRSWED--NGITRYVTEILVKTTGT 108
>gi|213579978|ref|ZP_03361804.1| single-strand DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 146
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + + NG V S+ T + + G K + +WHR+ ++
Sbjct: 4 KGVNKVILVGNLGQDPEVRYMPNGGAVVNLSLATSDTWTDKQTGDKK--ERTEWHRVVLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + + G
Sbjct: 62 GK-LAEIASEYLRKGSQVYIEGALRTRKWTDQ-SGVEKYTTEVVVSQSGT 109
>gi|395233065|ref|ZP_10411311.1| single-strand binding protein [Enterobacter sp. Ag1]
gi|394732581|gb|EJF32249.1| single-strand binding protein [Enterobacter sp. Ag1]
Length = 185
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K II G + P + + NG V S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIIVGNLGQDPEVRYMPNGGAVASLSLATSESWRDKQTG--EMRENTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D +G + + EI + ++G
Sbjct: 62 GK-LAEIASEYLRKGAQVYIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGT 109
>gi|291289343|ref|YP_003517675.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
gi|290792304|gb|ADD63629.1| single-stranded DNA-binding protein [Klebsiella pneumoniae]
Length = 226
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 80 GFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIA 139
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+
Sbjct: 15 AVRGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVV 72
Query: 140 VHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ + L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 73 LFGK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTG 120
>gi|331643217|ref|ZP_08344349.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H736]
gi|331037444|gb|EGI09667.1| plasmid-derived single-stranded DNA-binding protein (SSB)
(Helix-destabilizing protein) [Escherichia coli H736]
Length = 192
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|330445056|ref|ZP_08308709.1| single-stranded DNA-binding protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489247|dbj|GAA03206.1| single-stranded DNA-binding protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 174
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILVGNLGNDPEVRYIPNGGAVANITIATSESWRDKNTGEQR--EKTEWHRVALY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E++G Y L K S VYVEG ++ R + + G+ + EI ++
Sbjct: 62 GKLAEVVGEY----LRKGSQVYVEGQLQTRKWQNQ-QGQDQYTTEIVVK 105
>gi|145219141|ref|YP_001129850.1| single-strand binding protein [Chlorobium phaeovibrioides DSM 265]
gi|145205305|gb|ABP36348.1| single-strand binding protein [Chlorobium phaeovibrioides DSM 265]
Length = 168
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K + G + P + + +G+TV F++ T + S + + +WHRI V
Sbjct: 3 RGINKVTLIGNLGSDPEVRQIPSGQTVANFTLATSDSYKD---NSGTMQERTEWHRIVVW 59
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVK 179
EI G Y L K VY+EG I+ R ++D GE K
Sbjct: 60 GRLAEICGQY----LKKGRQVYLEGRIQTRSWDDQKTGEKK 96
>gi|398878877|ref|ZP_10633982.1| single stranded DNA-binding protein [Pseudomonas sp. GM67]
gi|398197996|gb|EJM84964.1| single stranded DNA-binding protein [Pseudomonas sp. GM67]
Length = 174
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|374703948|ref|ZP_09710818.1| single-strand binding protein [Pseudomonas sp. S9]
Length = 165
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQK--VERTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|432404727|ref|ZP_19647459.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
gi|430921014|gb|ELC41873.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
Length = 179
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|168822792|ref|ZP_02834792.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|409248434|ref|YP_004193461.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|205340874|gb|EDZ27638.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320089249|emb|CBY99002.1| Single-stranded DNA-binding protein SSB; Helix-destabilizing
protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 184
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K II G + P + + NG V S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTG--EMRENTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K + VYVEG + R + D +G + + EI + ++G
Sbjct: 62 GK-LAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNG 108
>gi|407368359|ref|ZP_11114891.1| protein Ssb [Pseudomonas mandelii JR-1]
Length = 175
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|398852125|ref|ZP_10608794.1| single stranded DNA-binding protein [Pseudomonas sp. GM80]
gi|398245001|gb|EJN30533.1| single stranded DNA-binding protein [Pseudomonas sp. GM80]
Length = 174
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|398860791|ref|ZP_10616435.1| single stranded DNA-binding protein [Pseudomonas sp. GM79]
gi|398234231|gb|EJN20114.1| single stranded DNA-binding protein [Pseudomonas sp. GM79]
Length = 175
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|398999055|ref|ZP_10701808.1| single stranded DNA-binding protein [Pseudomonas sp. GM18]
gi|398132674|gb|EJM21936.1| single stranded DNA-binding protein [Pseudomonas sp. GM18]
Length = 173
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|398838638|ref|ZP_10595912.1| single stranded DNA-binding protein [Pseudomonas sp. GM102]
gi|398901736|ref|ZP_10650527.1| single stranded DNA-binding protein [Pseudomonas sp. GM50]
gi|398993726|ref|ZP_10696664.1| single stranded DNA-binding protein [Pseudomonas sp. GM21]
gi|398115509|gb|EJM05291.1| single stranded DNA-binding protein [Pseudomonas sp. GM102]
gi|398134069|gb|EJM23244.1| single stranded DNA-binding protein [Pseudomonas sp. GM21]
gi|398179347|gb|EJM66959.1| single stranded DNA-binding protein [Pseudomonas sp. GM50]
Length = 174
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|398990499|ref|ZP_10693681.1| single stranded DNA-binding protein [Pseudomonas sp. GM24]
gi|399015355|ref|ZP_10717629.1| single stranded DNA-binding protein [Pseudomonas sp. GM16]
gi|398108709|gb|EJL98659.1| single stranded DNA-binding protein [Pseudomonas sp. GM16]
gi|398144101|gb|EJM32961.1| single stranded DNA-binding protein [Pseudomonas sp. GM24]
Length = 174
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|283787210|ref|YP_003367075.1| single-stranded binding protein [Citrobacter rodentium ICC168]
gi|282950664|emb|CBG90338.1| single-stranded binding protein [Citrobacter rodentium ICC168]
Length = 176
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + L +G V F++ T + + G ++ + +WHRI +
Sbjct: 4 RGINKVILVGNLGQDPEVRYLPSGGAVANFTLATSDSWRDKQTG--EMKEQTEWHRIVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D +G+ + EI + + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIG 108
>gi|116006863|ref|YP_788046.1| single-stranded DNA-binding protein [Escherichia coli]
gi|115500718|dbj|BAF33949.1| SSB, single-strand binding protein [Escherichia coli]
Length = 175
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|432414426|ref|ZP_19657073.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE39]
gi|432449013|ref|ZP_19691299.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
gi|430931579|gb|ELC52023.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE39]
gi|430969368|gb|ELC86488.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE191]
Length = 175
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRSRSWED--NGITRYVTEILVKTTGT 108
>gi|377579671|ref|ZP_09808635.1| single-stranded DNA-binding protein [Escherichia hermannii NBRC
105704]
gi|377538988|dbj|GAB53800.1| single-stranded DNA-binding protein [Escherichia hermannii NBRC
105704]
Length = 179
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + L +G V F++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYLPSGGAVANFTLATSDSWRDKQTG--EMKEQTEWHRVVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D +G+ + EI + + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIG 108
>gi|336248196|ref|YP_004591906.1| single-stranded DNA-binding protein [Enterobacter aerogenes KCTC
2190]
gi|444353688|ref|YP_007389832.1| Single-stranded DNA-binding protein [Enterobacter aerogenes
EA1509E]
gi|334734252|gb|AEG96627.1| single-stranded DNA-binding protein [Enterobacter aerogenes KCTC
2190]
gi|443904518|emb|CCG32292.1| Single-stranded DNA-binding protein [Enterobacter aerogenes
EA1509E]
Length = 174
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V F++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K EI + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEIVVNVGGT 109
>gi|329893628|ref|ZP_08269762.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC3088]
gi|328923555|gb|EGG30867.1| Single-stranded DNA-binding protein [gamma proteobacterium
IMCC3088]
Length = 163
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + +G VT S+ T + + G + +WHR+
Sbjct: 4 RGVNKVILVGNLGNDPETRFMPSGGAVTNVSLATSETWKDKQTGQPQ--ERTEWHRVVFF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
N EI G Y L K S VYVEG + R + D
Sbjct: 62 NRLAEIAGEY----LKKGSKVYVEGALRTRKWQD 91
>gi|260767311|ref|ZP_05876251.1| single-stranded DNA-binding protein [Vibrio furnissii CIP 102972]
gi|260617718|gb|EEX42897.1| single-stranded DNA-binding protein [Vibrio furnissii CIP 102972]
Length = 177
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V +V T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILVGNLGSDPEVRYMPSGGAVANITVATSETWRDKATGEQR--EKTEWHRVALY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|365850084|ref|ZP_09390552.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
gi|364568409|gb|EHM46054.1| single-strand binding family protein [Yokenella regensburgei ATCC
43003]
Length = 189
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + L NG V ++ T + + G +L + +WHR+ +
Sbjct: 4 KGVNKVILVGNLGQDPEVRYLPNGGAVCSIALATSESWRDKTTG--ELKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K EI + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEIVVNVGGT 109
>gi|194440094|ref|ZP_03072148.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
gi|194420979|gb|EDX37012.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 101-1]
Length = 175
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|157418097|ref|YP_001481169.1| single-stranded DNA-binding protein [Escherichia coli APEC O1]
gi|301329996|ref|ZP_07222684.1| single-strand binding family protein [Escherichia coli MS 78-1]
gi|88770147|gb|ABD51584.1| Ssb [Escherichia coli APEC O1]
gi|300843969|gb|EFK71729.1| single-strand binding family protein [Escherichia coli MS 78-1]
Length = 188
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|418306357|ref|ZP_12918148.1| single-stranded DNA binding protein Ssb [Escherichia coli UMNF18]
gi|339418457|gb|AEJ60124.1| single-stranded DNA binding protein Ssb [Escherichia coli UMNF18]
Length = 188
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 74
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GKFAEVAGEY----LHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|302595385|ref|YP_003829247.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302595504|ref|YP_003829122.1| single-stranded DNA-binding protein [Escherichia coli]
gi|302310145|gb|ADL14016.1| Ssb [Escherichia coli]
gi|302310273|gb|ADL14141.1| Ssb [Escherichia coli]
Length = 210
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 39 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 96
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 97 GKLAEVAGEY----LRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 143
>gi|383310980|ref|YP_005363790.1| single-strand DNA-binding protein [Pasteurella multocida subsp.
multocida str. HN06]
gi|380872252|gb|AFF24619.1| single-strand DNA-binding protein [Pasteurella multocida subsp.
multocida str. HN06]
Length = 150
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+KAII G + + P + + NG+ V SV T + + + + + +WHRI +
Sbjct: 3 GVNKAIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDK--NTNERREVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSKVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|19401614|gb|AAL87634.1|AF435961_1 single-stranded DNA binding protein [Paracentrotus lividus]
Length = 146
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF----DQRIVGSKDLPKPVQWHR 137
R ++K I G+V PV + + VTIFSV T ++ + S D+ + WHR
Sbjct: 26 RSLNKVQILGRVGQDPVMRQADSKNPVTIFSVATNEMWRTGESELYNTSGDINQKTTWHR 85
Query: 138 IAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
I+V L A + + K + VYVEG I+ Y D N
Sbjct: 86 ISVFRPGLRDVAYQYIRKGARVYVEGKIDYGEYTDKNN 123
>gi|388467353|ref|ZP_10141563.1| single-strand DNA-binding protein [Pseudomonas synxantha BG33R]
gi|388010933|gb|EIK72120.1| single-strand DNA-binding protein [Pseudomonas synxantha BG33R]
Length = 171
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|254491015|ref|ZP_05104196.1| single-strand binding protein [Methylophaga thiooxidans DMS010]
gi|224463528|gb|EEF79796.1| single-strand binding protein [Methylophaga thiooxydans DMS010]
Length = 161
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G++ P + NG ++ V T + R G + + +WHR+ + N
Sbjct: 3 VNKVILVGRLGAEPESRAFPNGGSICNLRVATSETWKDRQTGERQ--ERTEWHRVVLRNR 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVY 170
LG A + L K S VY+EG I+ R +
Sbjct: 61 -LGEVAQQYLHKGSQVYIEGRIQTRKW 86
>gi|432639083|ref|ZP_19874945.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE81]
gi|431167841|gb|ELE68096.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE81]
Length = 179
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|271501962|ref|YP_003334988.1| single-strand-binding protein [Dickeya dadantii Ech586]
gi|270345517|gb|ACZ78282.1| single-strand binding protein [Dickeya dadantii Ech586]
Length = 182
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPNGGAVANLTLATSDSWRDKQTGEQK--ERTEWHRVALY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S VY+EG + R + D G+ + E+ +
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLRTRKWQDQ-GGQDRYTTEVVV 104
>gi|206579111|ref|YP_002241000.1| single-stranded DNA-binding protein [Klebsiella pneumoniae 342]
gi|288937646|ref|YP_003441705.1| single-strand binding protein [Klebsiella variicola At-22]
gi|290512385|ref|ZP_06551752.1| single-stranded DNA-binding protein [Klebsiella sp. 1_1_55]
gi|206568169|gb|ACI09945.1| single-stranded DNA-binding protein [Klebsiella pneumoniae 342]
gi|288892355|gb|ADC60673.1| single-strand binding protein [Klebsiella variicola At-22]
gi|289775380|gb|EFD83381.1| single-stranded DNA-binding protein [Klebsiella sp. 1_1_55]
Length = 175
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V F++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGT 109
>gi|296100204|ref|YP_003617121.1| single-strand DNA-binding protein [Pseudomonas putida]
gi|295443570|dbj|BAJ06449.1| single-strand DNA-binding protein [Pseudomonas putida]
Length = 171
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|146308890|ref|YP_001189355.1| single-strand binding protein [Pseudomonas mendocina ymp]
gi|421503855|ref|ZP_15950800.1| single-strand binding protein [Pseudomonas mendocina DLHK]
gi|145577091|gb|ABP86623.1| single-strand binding protein [Pseudomonas mendocina ymp]
gi|400345359|gb|EJO93724.1| single-strand binding protein [Pseudomonas mendocina DLHK]
Length = 162
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L +G VT S+ T + + G K + +WHR+A+
Sbjct: 3 RGVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVALF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|66047745|ref|YP_237586.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B728a]
gi|63258452|gb|AAY39548.1| single-strand binding protein [Pseudomonas syringae pv. syringae
B728a]
Length = 183
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGEKK--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|398868939|ref|ZP_10624328.1| single stranded DNA-binding protein [Pseudomonas sp. GM78]
gi|398232200|gb|EJN18175.1| single stranded DNA-binding protein [Pseudomonas sp. GM78]
Length = 172
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|398874812|ref|ZP_10630012.1| single stranded DNA-binding protein [Pseudomonas sp. GM74]
gi|398910792|ref|ZP_10655208.1| single stranded DNA-binding protein [Pseudomonas sp. GM49]
gi|398925583|ref|ZP_10661957.1| single stranded DNA-binding protein [Pseudomonas sp. GM48]
gi|398171944|gb|EJM59832.1| single stranded DNA-binding protein [Pseudomonas sp. GM48]
gi|398185133|gb|EJM72550.1| single stranded DNA-binding protein [Pseudomonas sp. GM49]
gi|398194035|gb|EJM81120.1| single stranded DNA-binding protein [Pseudomonas sp. GM74]
Length = 172
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|387895896|ref|YP_006326193.1| single-strand DNA-binding protein [Pseudomonas fluorescens A506]
gi|408479257|ref|ZP_11185476.1| single-strand DNA-binding protein [Pseudomonas sp. R81]
gi|440737886|ref|ZP_20917437.1| single-strand DNA-binding protein [Pseudomonas fluorescens
BRIP34879]
gi|447918563|ref|YP_007399131.1| single-strand DNA-binding protein [Pseudomonas poae RE*1-1-14]
gi|387161098|gb|AFJ56297.1| single-strand DNA-binding protein [Pseudomonas fluorescens A506]
gi|440381625|gb|ELQ18151.1| single-strand DNA-binding protein [Pseudomonas fluorescens
BRIP34879]
gi|445202426|gb|AGE27635.1| single-strand DNA-binding protein [Pseudomonas poae RE*1-1-14]
Length = 171
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|383311643|ref|YP_005364453.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
multocida str. HN06]
gi|380872915|gb|AFF25282.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
multocida str. HN06]
Length = 149
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+KAII G + + P + + NG+ V SV T + + + + + +WHRI +
Sbjct: 3 GVNKAIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDK--NTNERREVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 61 RQAEVAGEY----LRKGSKVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|312963339|ref|ZP_07777822.1| single-strand DNA-binding protein [Pseudomonas fluorescens WH6]
gi|311282419|gb|EFQ61017.1| single-strand DNA-binding protein [Pseudomonas fluorescens WH6]
Length = 171
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|332289112|ref|YP_004419964.1| single-stranded DNA-binding protein [Gallibacterium anatis UMN179]
gi|330432008|gb|AEC17067.1| single-stranded DNA-binding protein [Gallibacterium anatis UMN179]
Length = 171
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G + + P + NG V SV T + + G + + +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPELRTFANGDAVANISVATSERWQDKQSG--EWREITEWHRIVLFR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG + R + D NG+ + EI
Sbjct: 61 RLAEIAGQY----LRKGSKVYIEGKLRTRKWQDQ-NGQDRYTTEI 100
>gi|239948387|ref|ZP_04700140.1| single-stranded DNA-binding protein [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239922663|gb|EER22687.1| single-stranded DNA-binding protein [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 151
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|375132137|ref|YP_004994237.1| single strand DNA-binding protein - SSB [Vibrio furnissii NCTC
11218]
gi|315181311|gb|ADT88225.1| single strand DNA-binding protein - SSB [Vibrio furnissii NCTC
11218]
Length = 177
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V +V T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILVGNLGSDPEVRYMPSGGAVANITVATSETWRDKATGEQR--EKTEWHRVALY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|258623351|ref|ZP_05718355.1| single-strand binding protein [Vibrio mimicus VM573]
gi|258584317|gb|EEW09062.1| single-strand binding protein [Vibrio mimicus VM573]
Length = 177
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQK--EKTEWHRVTLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQ 105
>gi|423097613|ref|ZP_17085409.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q2-87]
gi|397886352|gb|EJL02835.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q2-87]
Length = 173
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|209542719|ref|YP_002274948.1| ssDNA-binding protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530396|gb|ACI50333.1| single-strand binding protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 184
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + G + ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEVRNSQAGAKIVSLTLATSDTWNDRASGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K VY+EG ++ R + D +G+ + E+ I R
Sbjct: 63 RLADVAERFLRKGRKVYLEGTLQTRKWTDQ-SGQERYTTEVVIDR 106
>gi|409399331|ref|ZP_11249646.1| single-strand binding protein [Acidocella sp. MX-AZ02]
gi|409131487|gb|EKN01188.1| single-strand binding protein [Acidocella sp. MX-AZ02]
Length = 171
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + ++G V +V T ++ + G + + +WHR+ + N+
Sbjct: 1 MNKVILVGNLGRDPEIRNTQSGMKVVNLAVATSESWNDKASGER--KELTEWHRVVIMND 58
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A K L K S +Y+EG ++ R + D +G+ + EI I R
Sbjct: 59 RLADVAEKYLKKGSKLYLEGKLQTRKWTDQ-SGQERYTAEIMIGR 102
>gi|421680579|ref|ZP_16120428.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri 1485-80]
gi|404342447|gb|EJZ68830.1| plasmid-derived single-stranded DNA-binding protein [Shigella
flexneri 1485-80]
Length = 175
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|16125716|ref|NP_420280.1| single-strand binding protein [Caulobacter crescentus CB15]
gi|221234472|ref|YP_002516908.1| single-strand DNA binding protein [Caulobacter crescentus NA1000]
gi|37999459|sp|Q9A894.1|SSB_CAUCR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|13422838|gb|AAK23448.1| single-strand binding protein [Caulobacter crescentus CB15]
gi|220963644|gb|ACL95000.1| single-strand DNA binding protein [Caulobacter crescentus NA1000]
Length = 167
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRSSGER--KEKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S+VY+EG ++ R + D+ G+ K EI +++
Sbjct: 63 NLVKVAEQYLRKGSTVYIEGALQTRKWTDN-TGQEKYSTEIVLQK 106
>gi|77461270|ref|YP_350777.1| single-stranded DNA-binding protein [Pseudomonas fluorescens Pf0-1]
gi|398977374|ref|ZP_10687091.1| single stranded DNA-binding protein [Pseudomonas sp. GM25]
gi|424925174|ref|ZP_18348535.1| Ssb [Pseudomonas fluorescens R124]
gi|77385273|gb|ABA76786.1| single-strand binding protein [Pseudomonas fluorescens Pf0-1]
gi|398138118|gb|EJM27148.1| single stranded DNA-binding protein [Pseudomonas sp. GM25]
gi|404306334|gb|EJZ60296.1| Ssb [Pseudomonas fluorescens R124]
Length = 172
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|410690638|ref|YP_006964351.1| Single-stranded DNA-binding protein [Salmonella sp. 14]
gi|389597322|gb|AFK90074.1| Single-stranded DNA-binding protein [Salmonella sp. 14]
Length = 184
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K II G + P + + NG V S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTG--EMRENTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K + VYVEG + R + D +G + + EI + ++G
Sbjct: 62 GK-LAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNG 108
>gi|387610355|ref|YP_006203786.1| ssb, single-strand binding protein [Escherichia coli ETEC H10407]
gi|309705565|emb|CBJ04410.1| ssb, single-strand binding protein [Escherichia coli ETEC H10407]
Length = 175
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|395781649|ref|ZP_10462067.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
gi|395421082|gb|EJF87340.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
Length = 148
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G + D P K + +G + F + T + + K +WH I V N
Sbjct: 2 LNKVMLIGYLGDDPESKTMTSGVEIVNFRMATSESYTDKKTNQK--IDKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A++ L K S VY+EG ++ R + D NG + EI + +
Sbjct: 60 HLAKIALQYLSKGSKVYIEGKLQTRKWQDK-NGHDRYTTEIVLSQ 103
>gi|330505176|ref|YP_004382045.1| single-strand binding protein [Pseudomonas mendocina NK-01]
gi|399522422|ref|ZP_10763086.1| ssb [Pseudomonas pseudoalcaligenes CECT 5344]
gi|328919462|gb|AEB60293.1| single-strand binding protein [Pseudomonas mendocina NK-01]
gi|399109856|emb|CCH39647.1| ssb [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 163
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L +G VT S+ T + + G K + +WHR+A+
Sbjct: 3 RGVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVALF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|268507175|ref|YP_003293974.1| single strand DNA binding protein [Escherichia coli ETEC H10407]
gi|266265496|dbj|BAI49200.1| single strand DNA binding protein [Escherichia coli ETEC H10407]
Length = 188
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 17 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EIREQTEWHRVVLF 74
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 75 GK-LAEVAGEYLHKGEQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 121
>gi|240138833|ref|YP_002963308.1| ssDNA-binding protein [Methylobacterium extorquens AM1]
gi|418061910|ref|ZP_12699738.1| single-strand binding protein [Methylobacterium extorquens DSM
13060]
gi|240008805|gb|ACS40031.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
AM1]
gi|373564543|gb|EHP90644.1| single-strand binding protein [Methylobacterium extorquens DSM
13060]
Length = 189
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH + ++N+
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGERK--EKTEWHSVVIYND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R + D +G K E+ ++R
Sbjct: 63 NLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGAEKYTTEVVLQR 106
>gi|417169612|ref|ZP_12001541.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0741]
gi|386170161|gb|EIH42225.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli 99.0741]
Length = 175
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIVVGRLGKDPEVCYIPNGGAVANLQVATSETWRDKQTG--EIREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|417536086|ref|ZP_12189355.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|353654966|gb|EHC96110.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
Length = 182
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ V
Sbjct: 5 RGVNKVILVGNLGQDPEVRYMPNGGAVANLTLATSESWRDKADG--EMREHTEWHRVVVF 62
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D +G+ K E+ + ++G
Sbjct: 63 GK-LAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVGQNGT 110
>gi|158424510|ref|YP_001525802.1| single-stranded DNA-binding protein [Azorhizobium caulinodans ORS
571]
gi|158331399|dbj|BAF88884.1| single-stranded DNA-binding protein [Azorhizobium caulinodans ORS
571]
Length = 205
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + + G + + +WH +A+ NE
Sbjct: 5 VNKVILVGNLGRDPEIRAFQNGGRVCNLRIATSETWRDKASGERR--ERTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG +E R D GE + E+ +R
Sbjct: 63 NLVGVAERFLKKGSKVYIEGQLETRKAPDQNGGE-RYFTEVVLR 105
>gi|379714214|ref|YP_005302552.1| single-stranded DNA-binding protein [Rickettsia massiliae str.
AZT80]
gi|383480882|ref|YP_005389797.1| single-stranded DNA-binding protein [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|376334860|gb|AFB32092.1| single-stranded DNA-binding protein [Rickettsia massiliae str.
AZT80]
gi|378933221|gb|AFC71724.1| single-stranded DNA-binding protein [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 152
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + ++
Sbjct: 5 LNKVILIGNVGRDPEMRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSD 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|15604667|ref|NP_221185.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Madrid E]
gi|383486814|ref|YP_005404494.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
GvV257]
gi|383488230|ref|YP_005405909.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Chernikova]
gi|383489075|ref|YP_005406753.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Katsinyian]
gi|383489914|ref|YP_005407591.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Dachau]
gi|383500052|ref|YP_005413413.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500887|ref|YP_005414247.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
RpGvF24]
gi|386082730|ref|YP_005999309.1| ssDNA-binding protein [Rickettsia prowazekii str. Rp22]
gi|6647831|sp|Q9ZCC2.1|SSB_RICPR RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|3861362|emb|CAA15261.1| SINGLE-STRAND BINDING PROTEIN (ssb) [Rickettsia prowazekii str.
Madrid E]
gi|292572496|gb|ADE30411.1| Single-stranded DNA-binding protein [Rickettsia prowazekii str.
Rp22]
gi|380757179|gb|AFE52416.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
GvV257]
gi|380758584|gb|AFE53820.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
RpGvF24]
gi|380761109|gb|AFE49631.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Chernikova]
gi|380761954|gb|AFE50475.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Katsinyian]
gi|380762798|gb|AFE51318.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763637|gb|AFE52156.1| single-stranded DNA-binding protein [Rickettsia prowazekii str.
Dachau]
Length = 152
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSIVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|374575667|ref|ZP_09648763.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM471]
gi|386395139|ref|ZP_10079917.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM1253]
gi|374423988|gb|EHR03521.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM471]
gi|385735765|gb|EIG55961.1| single stranded DNA-binding protein [Bradyrhizobium sp. WSM1253]
Length = 165
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + SV T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSVATSETWRDKATGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + +YVEG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKIYVEGALQTRKWTD 91
>gi|346992455|ref|ZP_08860527.1| single-strand binding protein [Ruegeria sp. TW15]
Length = 161
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 5 VNKVILVGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGERR--ERTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S +YVEG ++ R + D
Sbjct: 63 GLVRVAEQYLRKGSKIYVEGQLQTRKWQD 91
>gi|153008867|ref|YP_001370082.1| ssDNA-binding protein [Ochrobactrum anthropi ATCC 49188]
gi|151560755|gb|ABS14253.1| single-strand binding protein [Ochrobactrum anthropi ATCC 49188]
Length = 151
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH +A+ NE
Sbjct: 5 VNKVILVGHLGADPDVRRLNSGDMVVNLRIATSESWRDKNSGER--KEKTEWHTVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
+G A + L K S VY+EG ++ R + D NG + EI +++
Sbjct: 63 NIGKVAEQYLKKGSKVYIEGALQTRKWQDQ-NGNDRYSTEIVMKQ 106
>gi|57239014|ref|YP_180150.1| single-strand binding protein [Ehrlichia ruminantium str.
Welgevonden]
gi|57161093|emb|CAH58000.1| single-strand DNA binding protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 156
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K I+ G + P ++++NGK + FS+ T + + G + + +WH I V N
Sbjct: 5 GINKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKSSGIR--TEKTEWHNIVVFN 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
E L + K S VY+EG + R + D N
Sbjct: 63 EGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNN 95
>gi|374331569|ref|YP_005081753.1| ssDNA-binding protein [Pseudovibrio sp. FO-BEG1]
gi|359344357|gb|AEV37731.1| Single-strand DNA-binding protein [Pseudovibrio sp. FO-BEG1]
Length = 181
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + + T + R G + + +WHR+ V NE
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIVNLRIATSESWRDRNSGER--RERTEWHRVVVFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D +G+ K EI ++
Sbjct: 63 GLAKVAEQYLRKGSKVYIEGQLQTRKWQDQ-SGQDKYSTEIVLQ 105
>gi|262401517|ref|ZP_06078084.1| single-stranded DNA-binding protein [Vibrio sp. RC586]
gi|262352232|gb|EEZ01361.1| single-stranded DNA-binding protein [Vibrio sp. RC586]
Length = 177
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQK--EKTEWHRVTLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQ 105
>gi|254469361|ref|ZP_05082766.1| single-strand DNA-binding protein [Pseudovibrio sp. JE062]
gi|211961196|gb|EEA96391.1| single-strand DNA-binding protein [Pseudovibrio sp. JE062]
Length = 182
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + + T + R G + + +WHR+ V NE
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIVNLRIATSESWRDRNSGER--RERTEWHRVVVFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D +G+ K EI ++
Sbjct: 63 GLAKVAEQYLRKGSKVYIEGQLQTRKWQDQ-SGQDKYSTEIVLQ 105
>gi|404398230|ref|ZP_10989814.1| protein Ssb [Pseudomonas fuscovaginae UPB0736]
Length = 174
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|424914243|ref|ZP_18337607.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392850419|gb|EJB02940.1| single stranded DNA-binding protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 178
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G + P + ++G V F++ T + R G K + WH I V NE
Sbjct: 5 LNKVCLLGNLGADPEIRRTQSGNAVANFNLATSESWRDRTTGEK--KEKTDWHNIVVWNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
L + L K S VY+EG ++ R + D +G+ + + E+ ++ D
Sbjct: 63 GLAKVCEQYLRKGSKVYIEGKLQTRKWQDQ-DGKDRYVTEVILQFDA 108
>gi|119386513|ref|YP_917568.1| single-strand binding protein [Paracoccus denitrificans PD1222]
gi|119377108|gb|ABL71872.1| single-strand binding protein [Paracoccus denitrificans PD1222]
Length = 170
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH + +++E
Sbjct: 5 VNKVILVGNLGQDPEVRSFQNGGKVANLRIATSEQWKDRNTGERR--ERTEWHTVVIYSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VYVEG +E R + D +G + E+ +R
Sbjct: 63 PLVRVAEQFLKKGSKVYVEGQLETRKWQDQ-SGNDRYSTEVALR 105
>gi|440509613|ref|YP_007347049.1| single-stranded DNA-binding protein [Candidatus Blochmannia
chromaiodes str. 640]
gi|440453826|gb|AGC03318.1| single-stranded DNA-binding protein [Candidatus Blochmannia
chromaiodes str. 640]
Length = 158
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + +G VT SV T + + + + + +WHR+ +
Sbjct: 4 RGINKVILIGYLGQEPEVRYMSSGSMVTNISVATTESWKDK--QTNEFKEKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L A + L K S VY+EG ++ R + + NG+ + I EI +
Sbjct: 62 GK-LAEIASEYLHKGSQVYIEGSLKTRKWQNQ-NGQDRYITEIIV 104
>gi|424810490|ref|ZP_18235842.1| single strand DNA-binding protein; SSB [Vibrio mimicus SX-4]
gi|342322421|gb|EGU18212.1| single strand DNA-binding protein; SSB [Vibrio mimicus SX-4]
Length = 183
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 10 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQK--EKTEWHRVTLY 67
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 68 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQ 111
>gi|71559065|ref|YP_271792.1| single-strand binding protein [Salmonella enterica]
gi|68166364|gb|AAY88125.1| single-strand binding protein [Salmonella enterica]
Length = 172
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + R+ ++ + +WHR+ V
Sbjct: 4 RGVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETW--RVRQDGEMREHTEWHRVVVF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D +G+ K+ E+ + G
Sbjct: 62 GK-LAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKSTTEVIVNVGGT 109
>gi|365104444|ref|ZP_09334068.1| single-strand binding protein [Citrobacter freundii 4_7_47CFAA]
gi|418512553|ref|ZP_13078794.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|363644253|gb|EHL83546.1| single-strand binding protein [Citrobacter freundii 4_7_47CFAA]
gi|366083585|gb|EHN47504.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
Length = 184
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K II G + P + + NG V S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIIVGNLGQDPEVRYMPNGGAVANLSLATSESWRDKQTG--EMRENTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K + VYVEG + R + D +G + + EI + ++G
Sbjct: 62 GK-LAEVASEYLRKGAQVYVEGQLRTRNWQDD-SGVTRYVTEIVVGQNG 108
>gi|269958925|ref|YP_003328714.1| single-strand binding protein [Anaplasma centrale str. Israel]
gi|269848756|gb|ACZ49400.1| single-strand binding protein [Anaplasma centrale str. Israel]
Length = 167
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P ++++NGK + FS+ T + + G++ + +WH I V +
Sbjct: 5 GVNKVILIGHLGKDPDVRVMQNGKEMASFSLATSESWLDKASGAR--TEKTEWHSIVVFS 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E L K S VY+EG + R ++D NG + E+ ++
Sbjct: 63 EGLVRVVKTCARKGSKVYIEGSLRTRKWSDQ-NGNDRYTTEVVLQ 106
>gi|431805837|ref|YP_007232738.1| ssDNA-binding protein [Liberibacter crescens BT-1]
gi|430799812|gb|AGA64483.1| Single-stranded DNA-binding protein [Liberibacter crescens BT-1]
Length = 166
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
+++AI+ G V P + L N V F++ T + + +K+ + WHRI V N+
Sbjct: 3 INRAILLGHVGGDPEIRTLNNDTNVAQFNLATSERWTDK--DTKERKERTNWHRIVVFNQ 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ + K S V +EG IE R Y D N E +++ EI +R
Sbjct: 61 HIIDVVRNYVKKGSKVGIEGSIETRKYTDKNNIE-RSVTEIVLR 103
>gi|365894363|ref|ZP_09432511.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3843]
gi|365424901|emb|CCE05053.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. STM 3843]
Length = 163
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKATGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|330812044|ref|YP_004356506.1| single-strand binding protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378953152|ref|YP_005210640.1| protein Ssb [Pseudomonas fluorescens F113]
gi|423699604|ref|ZP_17674094.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q8r1-96]
gi|327380152|gb|AEA71502.1| putative single-strand binding protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|359763166|gb|AEV65245.1| Ssb [Pseudomonas fluorescens F113]
gi|387997115|gb|EIK58445.1| single-strand DNA-binding protein [Pseudomonas fluorescens Q8r1-96]
Length = 173
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|354593813|ref|ZP_09011856.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
gi|353672924|gb|EHD14620.1| single-stranded DNA-binding protein [Commensalibacter intestini
A911]
Length = 174
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + G V ++ T ++ R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPDVRTTQMGTKVVNLTLATSDTWNDRQTGERK--ENTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A K L K V++EG ++ R + D G + E+ + R
Sbjct: 63 RLADVAEKYLRKGRKVFIEGQLKTRKWTDQ-QGMERYTTEVVVDR 106
>gi|395778503|ref|ZP_10459015.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|423715185|ref|ZP_17689409.1| single-strand binding protein [Bartonella elizabethae F9251]
gi|395417711|gb|EJF84048.1| single-strand binding protein [Bartonella elizabethae Re6043vi]
gi|395430669|gb|EJF96711.1| single-strand binding protein [Bartonella elizabethae F9251]
Length = 147
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G + D P K + +G V F + T + + K + +WH + V N
Sbjct: 2 LNKVMLIGYLGDNPESKTMNSGAEVVNFRLATSESYTDKNTNQK--VEKTEWHSVVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A++ L K S VYVEG ++ R + D NG + EI + +
Sbjct: 60 HLAKIALQYLHKGSKVYVEGKLQTRKWQDK-NGIDRFTTEIVLSQ 103
>gi|335042084|ref|ZP_08535111.1| single-stranded DNA-binding protein [Methylophaga
aminisulfidivorans MP]
gi|333788698|gb|EGL54580.1| single-stranded DNA-binding protein [Methylophaga
aminisulfidivorans MP]
Length = 170
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G++ P + NG ++ + T + R G + + +WHR+ + N+
Sbjct: 3 VNKVILVGRLGAEPESRAFPNGGSICNLRIATSESWKDRQTGERQ--ERTEWHRVVLRNK 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
LG A + L K S VY+EG I+ R + +
Sbjct: 61 -LGEIAQQYLHKGSQVYIEGRIQTRKWQN 88
>gi|345429787|ref|YP_004822905.1| hypothetical protein PARA_12130 [Haemophilus parainfluenzae T3T1]
gi|301155848|emb|CBW15316.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 140
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRSMPNGEAVANISVATSEAWADKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K + VY+EG + R + D NG+ + EI
Sbjct: 61 KLAEICGQY----LKKGAQVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|254994869|ref|ZP_05277059.1| single-strand binding protein (ssb) [Anaplasma marginale str.
Mississippi]
gi|255003002|ref|ZP_05277966.1| single-strand binding protein (ssb) [Anaplasma marginale str.
Puerto Rico]
gi|255004128|ref|ZP_05278929.1| single-strand binding protein (ssb) [Anaplasma marginale str.
Virginia]
Length = 168
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P ++++NGK + FS+ T + + G++ + +WH I V +
Sbjct: 5 GVNKVILIGHLGKDPDVRVMQNGKEMASFSLATSESWLDKASGAR--TEKTEWHSIVVFS 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E L K S VY+EG + R ++D NG + E+ ++
Sbjct: 63 EGLVRVVKTCARKGSKVYIEGSLRTRKWSDQ-NGNDRYTTEVVLQ 106
>gi|51474004|ref|YP_067761.1| single-stranded DNA-binding protein [Rickettsia typhi str.
Wilmington]
gi|383752779|ref|YP_005427879.1| single-stranded DNA-binding protein [Rickettsia typhi str. TH1527]
gi|383843614|ref|YP_005424117.1| single-stranded DNA-binding protein [Rickettsia typhi str.
B9991CWPP]
gi|81826347|sp|Q68Y11.1|SSB_RICTY RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|51460316|gb|AAU04279.1| single-strand binding protein [Rickettsia typhi str. Wilmington]
gi|380759422|gb|AFE54657.1| single-stranded DNA-binding protein [Rickettsia typhi str. TH1527]
gi|380760261|gb|AFE55495.1| single-stranded DNA-binding protein [Rickettsia typhi str.
B9991CWPP]
Length = 152
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSIVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|407786298|ref|ZP_11133444.1| single-strand binding protein [Celeribacter baekdonensis B30]
gi|407202030|gb|EKE72026.1| single-strand binding protein [Celeribacter baekdonensis B30]
Length = 175
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ E
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRTTGER--KERTEWHSVAIFQE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D +G+ + EI ++
Sbjct: 63 GLVRIAEQYLRKGSKVYIEGKLQTRKWQDQ-SGQDRYTTEIVLQ 105
>gi|73540075|ref|YP_294595.1| single-stranded DNA-binding protein [Ralstonia eutropha JMP134]
gi|72117488|gb|AAZ59751.1| single-strand binding protein [Ralstonia eutropha JMP134]
Length = 181
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + + +G VT + T + + G ++ + +WHR+A+ +
Sbjct: 4 INKVILVGNLGADPETRYMPSGDAVTNLRLATTDRYKDKQSG--EMKEATEWHRVAMFGK 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
L A + L K SSVY+EG I R + D +G+ K EI
Sbjct: 62 -LAEIAAQYLRKGSSVYIEGKIRTRKWQDQ-SGQDKYSTEIV 101
>gi|219857031|ref|YP_002474063.1| single-strand DNA (ssDNA) binding protein [Pseudomonas putida]
gi|414085887|ref|YP_002154413.1| single-strand DNA (ssDNA) binding protein [Pseudomonas
resinovorans]
gi|171363644|dbj|BAG15889.1| single-strand DNA (ssDNA) binding protein [Pseudomonas
resinovorans]
gi|219688959|dbj|BAH10050.1| single-strand DNA (ssDNA) binding protein [Pseudomonas putida]
Length = 170
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPETRYLPNGNAVTNLSLATSEQWTDKQTGQK--VERTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|304413599|ref|ZP_07395043.1| single-stranded DNA-binding protein [Candidatus Regiella
insecticola LSR1]
gi|304283690|gb|EFL92084.1| single-stranded DNA-binding protein [Candidatus Regiella
insecticola LSR1]
Length = 177
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG VT ++ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGNAVTNITLATSESWRDKATGEQK--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L A + L K S VY+EG ++ R + D +G+ + E+ +
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGTLQTRKWQDQ-SGQDRYTTEVVV 104
>gi|432417345|ref|ZP_19659954.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE44]
gi|430940109|gb|ELC60303.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE44]
Length = 179
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSESWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GK-LAEVAGEYLRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|398967326|ref|ZP_10681852.1| single stranded DNA-binding protein [Pseudomonas sp. GM30]
gi|398144882|gb|EJM33694.1| single stranded DNA-binding protein [Pseudomonas sp. GM30]
Length = 172
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|383501158|ref|YP_005414517.1| single-stranded DNA-binding protein [Rickettsia australis str.
Cutlack]
gi|378932169|gb|AFC70674.1| single-stranded DNA-binding protein [Rickettsia australis str.
Cutlack]
Length = 152
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + +E
Sbjct: 5 LNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVIERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|258545285|ref|ZP_05705519.1| nitrogenase molybdenum-iron cofactor biosynthesis protein NifN
[Cardiobacterium hominis ATCC 15826]
gi|258519498|gb|EEV88357.1| nitrogenase molybdenum-iron cofactor biosynthesis protein NifN
[Cardiobacterium hominis ATCC 15826]
Length = 198
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + + P + + NG+ V S+ T ++ + G K + +WHR+ +
Sbjct: 3 GVNKVILIGNLGNDPDMRYMPNGEPVANISIATSETWNDKNTGEKR--EKTEWHRVVAYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
EI+G Y K S +YVEG ++ R + D
Sbjct: 61 RTAEIIGQYT----RKGSKLYVEGRLQTRKWTD 89
>gi|424926277|ref|ZP_18349202.1| Ssb [Pseudomonas fluorescens R124]
gi|404307002|gb|EJZ60963.1| Ssb [Pseudomonas fluorescens R124]
Length = 171
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRDLPNGNAVTNLSLATSEQWTDKQTGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|398891092|ref|ZP_10644532.1| single stranded DNA-binding protein [Pseudomonas sp. GM55]
gi|398187327|gb|EJM74671.1| single stranded DNA-binding protein [Pseudomonas sp. GM55]
Length = 171
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|425745666|ref|ZP_18863709.1| single-strand binding family protein [Acinetobacter baumannii
WC-323]
gi|425488104|gb|EKU54444.1| single-strand binding family protein [Acinetobacter baumannii
WC-323]
Length = 78
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF-DQRIVGSKDLPKPVQWHRIA 139
RGV+KAI+ G + P+ KI NG + T FS+ T + D+R S D + +WHRI
Sbjct: 1 MRGVNKAILVGTLGADPISKIFPNGGSYTQFSIATSEKWQDKR---SGDWMEHTEWHRIV 57
Query: 140 VHNEILGSYAVKQLVK 155
HN+ G A+K L K
Sbjct: 58 AHNKT-GEIAMKFLKK 72
>gi|402698216|ref|ZP_10846195.1| protein Ssb [Pseudomonas fragi A22]
Length = 177
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|444921571|ref|ZP_21241406.1| Single-stranded DNA-binding protein [Wohlfahrtiimonas
chitiniclastica SH04]
gi|444507298|gb|ELV07475.1| Single-stranded DNA-binding protein [Wohlfahrtiimonas
chitiniclastica SH04]
Length = 185
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P K + NG V ++ T + R G + +WHR+ +
Sbjct: 3 RGINKVILLGHLGRDPEVKYMPNGNAVANMTIATSESWKDRNSGQPQ--ERTEWHRVVIF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D +G+ + EI + G
Sbjct: 61 GK-LADIAGQYLRKGSLVYIEGQLQTRKWTDQ-SGQDRYTTEIVVNMSG 107
>gi|56416658|ref|YP_153732.1| single-strand binding protein [Anaplasma marginale str. St. Maries]
gi|222475022|ref|YP_002563437.1| single-strand binding protein (ssb) [Anaplasma marginale str.
Florida]
gi|56387890|gb|AAV86477.1| single-strand binding protein [Anaplasma marginale str. St. Maries]
gi|222419158|gb|ACM49181.1| single-strand binding protein (ssb) [Anaplasma marginale str.
Florida]
Length = 179
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P ++++NGK + FS+ T + + G++ + +WH I V +
Sbjct: 16 GVNKVILIGHLGKDPDVRVMQNGKEMASFSLATSESWLDKASGAR--TEKTEWHSIVVFS 73
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E L K S VY+EG + R ++D NG + E+ ++
Sbjct: 74 EGLVRVVKTCARKGSKVYIEGSLRTRKWSDQ-NGNDRYTTEVVLQ 117
>gi|145631187|ref|ZP_01786961.1| single-strand DNA-binding protein [Haemophilus influenzae R3021]
gi|144983285|gb|EDJ90776.1| single-strand DNA-binding protein [Haemophilus influenzae R3021]
Length = 140
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K II G + + P + + NG+ V SV T + + G + + +WHRI +
Sbjct: 3 GINKVIIVGHLGNDPEMRSMPNGEAVVNISVATSEAWTDKNTGERR--EVTEWHRIVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K + VY+EG + R + D NG+ + EI
Sbjct: 61 KLAEICGQY----LKKGAQVYIEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|409427735|ref|ZP_11262228.1| protein Ssb [Pseudomonas sp. HYS]
Length = 170
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VERTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|62955585|ref|NP_001017806.1| single-stranded DNA-binding protein, mitochondrial [Danio rerio]
gi|62204395|gb|AAH92875.1| Zgc:110325 [Danio rerio]
gi|182888840|gb|AAI64281.1| Zgc:110325 protein [Danio rerio]
Length = 146
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
+ ++K I G+V PV + + VTIFS+ T ++ + VG+ D+ + WHRI
Sbjct: 27 KSINKVQILGRVGQDPVMRQVEGRNPVTIFSMATNEMWRSGEGEPVGAGDVTQKTTWHRI 86
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S ++VEG ++ Y D N
Sbjct: 87 SVFKPGLRDVAYQYVKKGSRIFVEGKLDYGEYVDKNN 123
>gi|187928634|ref|YP_001899121.1| single-stranded DNA-binding protein [Ralstonia pickettii 12J]
gi|241114211|ref|YP_002973686.1| single-strand binding protein [Ralstonia pickettii 12D]
gi|187725524|gb|ACD26689.1| single-strand binding protein [Ralstonia pickettii 12J]
gi|240868784|gb|ACS66442.1| single-strand binding protein [Ralstonia pickettii 12D]
Length = 177
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G + P + + +G VT V T F + GS ++ + +WHRIA
Sbjct: 4 VNKVIIVGNLGADPETRYMPSGDAVTNIRVATTDRFKDK--GSGEMREATEWHRIAFFGR 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K SSVY+EG ++ R +
Sbjct: 62 LAEIAGEY----LKKGSSVYIEGRLKTRQW 87
>gi|395498931|ref|ZP_10430510.1| single-stranded DNA-binding protein [Pseudomonas sp. PAMC 25886]
gi|395797689|ref|ZP_10476977.1| single-stranded DNA-binding protein [Pseudomonas sp. Ag1]
gi|421139046|ref|ZP_15599092.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
gi|395338057|gb|EJF69910.1| single-stranded DNA-binding protein [Pseudomonas sp. Ag1]
gi|404509769|gb|EKA23693.1| single-strand DNA-binding protein [Pseudomonas fluorescens BBc6R8]
Length = 172
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|417239873|ref|ZP_12036497.1| putative single-stranded DNA-binding protein [Escherichia coli
9.0111]
gi|432620038|ref|ZP_19856100.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|386212987|gb|EII23425.1| putative single-stranded DNA-binding protein [Escherichia coli
9.0111]
gi|431145623|gb|ELE47237.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
Length = 124
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+G++K + G + P + ++NG TV S+ T + + G ++ + +WHR+ ++
Sbjct: 4 KGINKVTLIGNLGQDPEIRCMQNGVTVANLSIATSETWRDKQSG--EIKENTEWHRVVIY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
N+ L + L K VY+EG + R + D +GE EI + + G
Sbjct: 62 NK-LAEISRDFLCKGMQVYIEGTLRYRKWTDK-DGEEHYTTEIVVDQKG 108
>gi|295689345|ref|YP_003593038.1| single-strand binding protein [Caulobacter segnis ATCC 21756]
gi|295431248|gb|ADG10420.1| single-strand binding protein [Caulobacter segnis ATCC 21756]
Length = 191
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGADPEIRSLGSGDRVANLRIATSETWRDRNSGERK--EKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S+VY+EG ++ R + D+ G+ K EI +++
Sbjct: 63 NLVKVAEQYLKKGSTVYIEGALQTRKWTDNT-GQEKYSTEIVLQK 106
>gi|70732853|ref|YP_262620.1| single-stranded DNA-binding protein [Pseudomonas protegens Pf-5]
gi|68347152|gb|AAY94758.1| single-strand DNA-binding protein [Pseudomonas protegens Pf-5]
Length = 169
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VERTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|110833291|ref|YP_692150.1| single-stranded DNA-binding protein [Alcanivorax borkumensis SK2]
gi|110646402|emb|CAL15878.1| single-stranded DNA-binding protein [Alcanivorax borkumensis SK2]
Length = 172
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G VT + T + R G + + +WHR+ +
Sbjct: 3 RGVNKVILIGNLGADPETRFMPSGGAVTNVRLATSESWKDRQSGQ--MQERTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N+ LG A + L K S VY+EG I R +
Sbjct: 61 NK-LGEIAGEYLKKGSKVYIEGSIRTRKW 88
>gi|58578953|ref|YP_197165.1| single-strand binding protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58417579|emb|CAI26783.1| Single-strand binding protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 177
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K I+ G + P ++++NGK + FS+ T + + G + + +WH I V N
Sbjct: 26 GINKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKSSGIR--TEKTEWHNIVVFN 83
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
E L + K S VY+EG + R + D N
Sbjct: 84 EGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNN 116
>gi|426411749|ref|YP_007031848.1| single-stranded DNA-binding protein [Pseudomonas sp. UW4]
gi|426269966|gb|AFY22043.1| single-stranded DNA-binding protein [Pseudomonas sp. UW4]
Length = 170
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|398948072|ref|ZP_10672552.1| single stranded DNA-binding protein [Pseudomonas sp. GM33]
gi|398161080|gb|EJM49323.1| single stranded DNA-binding protein [Pseudomonas sp. GM33]
Length = 171
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|415768285|ref|ZP_11483605.1| single strand binding protein [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|348658054|gb|EGY75631.1| single strand binding protein [Aggregatibacter
actinomycetemcomitans D17P-2]
Length = 149
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G++ + P + + NG+ V S+ T + + G + + +WHR+ +
Sbjct: 3 GVNKVIIVGRLGNEPEMRAMPNGEAVANISIATSESWTDKNTGERR--EVTEWHRVVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VY+EG ++ R + D
Sbjct: 61 RQAEVCGEY----LHKGSQVYIEGRLKTRKWQD 89
>gi|422908931|ref|ZP_16943586.1| single-stranded DNA-binding protein [Vibrio cholerae HE-09]
gi|424658290|ref|ZP_18095547.1| single-stranded DNA-binding protein [Vibrio cholerae HE-16]
gi|341636423|gb|EGS61119.1| single-stranded DNA-binding protein [Vibrio cholerae HE-09]
gi|408055295|gb|EKG90229.1| single-stranded DNA-binding protein [Vibrio cholerae HE-16]
Length = 177
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D NG+ + +I ++
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTDIVVQ 105
>gi|152972922|ref|YP_001338068.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238892532|ref|YP_002917266.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|330004955|ref|ZP_08305070.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
gi|365143200|ref|ZP_09348131.1| single-stranded DNA-binding protein [Klebsiella sp. 4_1_44FAA]
gi|378976442|ref|YP_005224583.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|386032633|ref|YP_005952546.1| single-stranded DNA-binding protein [Klebsiella pneumoniae KCTC
2242]
gi|402782952|ref|YP_006638498.1| ssDNA-binding protein [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|419974829|ref|ZP_14490245.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980645|ref|ZP_14495928.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419985802|ref|ZP_14500940.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991578|ref|ZP_14506542.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997587|ref|ZP_14512382.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420003924|ref|ZP_14518566.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420009443|ref|ZP_14523926.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420015915|ref|ZP_14530212.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420021212|ref|ZP_14535394.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420028054|ref|ZP_14542038.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420032642|ref|ZP_14546455.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420038183|ref|ZP_14551832.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044223|ref|ZP_14557705.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420049942|ref|ZP_14563246.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420055536|ref|ZP_14568702.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420060144|ref|ZP_14573146.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420067194|ref|ZP_14579989.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420071837|ref|ZP_14584480.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078458|ref|ZP_14590915.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420082911|ref|ZP_14595201.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424828439|ref|ZP_18253167.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424935566|ref|ZP_18353938.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425078864|ref|ZP_18481967.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425079386|ref|ZP_18482483.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425089496|ref|ZP_18492589.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425094207|ref|ZP_18497290.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428935418|ref|ZP_19008894.1| ssDNA-binding protein [Klebsiella pneumoniae JHCK1]
gi|150957771|gb|ABR79801.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238544848|dbj|BAH61199.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328536468|gb|EGF62814.1| single-strand binding family protein [Klebsiella sp. MS 92-3]
gi|339759761|gb|AEJ95981.1| single-stranded DNA-binding protein [Klebsiella pneumoniae KCTC
2242]
gi|363649745|gb|EHL88847.1| single-stranded DNA-binding protein [Klebsiella sp. 4_1_44FAA]
gi|364515853|gb|AEW58981.1| single-strand DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397344796|gb|EJJ37926.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397345318|gb|EJJ38443.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350350|gb|EJJ43439.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397362423|gb|EJJ55073.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397363290|gb|EJJ55931.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397367611|gb|EJJ60221.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397375775|gb|EJJ68054.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397381299|gb|EJJ73471.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397387029|gb|EJJ79079.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392198|gb|EJJ84002.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397397129|gb|EJJ88810.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397404588|gb|EJJ96089.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397412225|gb|EJK03464.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397412359|gb|EJK03594.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397421643|gb|EJK12649.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397428541|gb|EJK19278.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397434283|gb|EJK24920.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397439873|gb|EJK30300.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397444800|gb|EJK35062.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397451680|gb|EJK41760.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543795|gb|AFQ67944.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405589665|gb|EKB63230.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405599937|gb|EKB73112.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405607898|gb|EKB80850.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610080|gb|EKB82905.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407809753|gb|EKF81004.1| Single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414705844|emb|CCN27548.1| single-stranded DNA-binding protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426300619|gb|EKV62895.1| ssDNA-binding protein [Klebsiella pneumoniae JHCK1]
Length = 174
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V F++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGT 109
>gi|426228127|ref|XP_004008166.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial [Ovis
aries]
Length = 148
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + KTV IFS+ T ++ + D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKKTVRIFSLATNEMWRSGENETYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 124
>gi|315122781|ref|YP_004063270.1| single-strand binding protein (ssb) [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496183|gb|ADR52782.1| single-strand binding protein (ssb) [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 155
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + V T + R+ G + + +WH + V E
Sbjct: 5 VNKVILIGNLGADPDVRHTQDGRRIVNIRVATSENWKDRVTGER--REKTEWHSVVVFVE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
LG + L K S VY+EG I+ R + D +G + EI +R
Sbjct: 63 ELGKVVEQYLKKGSKVYIEGSIQTRKWQDQ-SGNTRYTTEIIMR 105
>gi|27364815|ref|NP_760343.1| single-stranded DNA-binding protein [Vibrio vulnificus CMCP6]
gi|37681137|ref|NP_935746.1| single-stranded DNA-binding protein [Vibrio vulnificus YJ016]
gi|320155206|ref|YP_004187585.1| single-stranded DNA-binding protein [Vibrio vulnificus MO6-24/O]
gi|37999429|sp|Q8DCJ0.1|SSB_VIBVU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|27360960|gb|AAO09870.1| Single-stranded DNA-binding protein [Vibrio vulnificus CMCP6]
gi|37199888|dbj|BAC95717.1| single-stranded DNA-binding protein [Vibrio vulnificus YJ016]
gi|319930518|gb|ADV85382.1| single-stranded DNA-binding protein [Vibrio vulnificus MO6-24/O]
Length = 179
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + +G V +V T + + G + +WHR+ ++
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPSGGAVANITVATSETWRDKATGEPR--EKTEWHRVTLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQ 105
>gi|410609665|ref|YP_006953846.1| Ssb [Escherichia coli]
gi|385721324|gb|AFI72829.1| Ssb [Escherichia coli]
Length = 214
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G++ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 39 RGINKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 96
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K VY+EG + R + D NG + + EI ++ G
Sbjct: 97 GKLAEVAGEY----LRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 143
>gi|237797464|ref|ZP_04585925.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331020314|gb|EGI00371.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 188
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|149915251|ref|ZP_01903779.1| single-strand binding protein [Roseobacter sp. AzwK-3b]
gi|149810972|gb|EDM70811.1| single-strand binding protein [Roseobacter sp. AzwK-3b]
Length = 184
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 86 KAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEIL 145
K I G + P + +NG V S+ T + + G + + +WHR+A+ E L
Sbjct: 7 KVQIIGHLGRDPEVRTFQNGGGVCNLSIATTETWKDKNTGQRQ--ERTEWHRVAIFTEPL 64
Query: 146 GSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
A + L K S VY+EG +E R + D +G+ + E+ +R
Sbjct: 65 VRLAEQYLRKGSKVYIEGKLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|414162520|ref|ZP_11418767.1| single-stranded DNA-binding protein [Afipia felis ATCC 53690]
gi|410880300|gb|EKS28140.1| single-stranded DNA-binding protein [Afipia felis ATCC 53690]
Length = 161
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPDVRRTQDGRPIVNLSIATSDTWRDKNTGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K + VYVEG ++ R + D +G+ K E+ ++
Sbjct: 63 GLCKVAEQYLKKGAKVYVEGALQTRKWQDK-DGKDKYSTEVVLQ 105
>gi|188591137|ref|YP_001795737.1| single-stranded DNA-binding protein [Cupriavidus taiwanensis LMG
19424]
gi|170938031|emb|CAP63015.1| ssDNA-binding protein, controls activity of RecBCD nuclease
[Cupriavidus taiwanensis LMG 19424]
Length = 178
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + +G VT + T + + G ++ + +WHR+A+ +
Sbjct: 4 VNKVILVGNLGADPETRYMPSGDAVTNLRLATTDRYKDKQSG--EMKEATEWHRVAMFGK 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
L A + L K SSVY+EG I R + D +G+ K EI
Sbjct: 62 -LAEIAAQYLRKGSSVYIEGRIRTRKWQDQ-SGQDKYSTEIV 101
>gi|300313248|ref|YP_003777340.1| ssDNA-binding protein [Herbaspirillum seropedicae SmR1]
gi|124483560|emb|CAM32653.1| single-strand DNA-binding protein (helix-destabilizing protein)
[Herbaspirillum seropedicae]
gi|300076033|gb|ADJ65432.1| single-strand DNA-binding protein (helix-destabilizing protein)
[Herbaspirillum seropedicae SmR1]
Length = 173
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G + P + + NG+ VT +V T + + G K + +WHRI +
Sbjct: 4 VNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKK--ELTEWHRITFYRK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
EI G Y L K S +YVEG ++ R + D
Sbjct: 62 LAEIAGQY----LKKGSQIYVEGRLQTRKWQD 89
>gi|417194609|ref|ZP_12015556.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|419213249|ref|ZP_13756286.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|420101129|ref|ZP_14612258.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9455]
gi|420106899|ref|ZP_14617278.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|33323524|gb|AAQ07494.1|AF503408_18 Ssb [Enterobacteria phage P7]
gi|378044325|gb|EHW06744.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|386189643|gb|EIH78404.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|394414649|gb|EJE88588.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|394417997|gb|EJE91702.1| single-stranded DNA binding protein [Escherichia coli O111:H11 str.
CVM9455]
Length = 162
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG TV S+ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILIGTLGQDPEIRYIPNGGTVGRLSIATNESWRDKQTGQQK--EQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D G + EI + + G
Sbjct: 62 GK-LAEIASEYLRKGSQVYIEGKLKTRKWTDDA-GVERYTTEIIVSQGG 108
>gi|85715496|ref|ZP_01046477.1| single-strand DNA-binding protein [Nitrobacter sp. Nb-311A]
gi|85697691|gb|EAQ35567.1| single-strand DNA-binding protein [Nitrobacter sp. Nb-311A]
Length = 163
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + + T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDRTSGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + L K S VY+EG ++ R + D NG K E+ ++
Sbjct: 63 GLCKVVEQYLKKGSKVYIEGQLQTRKWTDQ-NGVEKYSTEVVLQ 105
>gi|410952995|ref|XP_003983162.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Felis catus]
Length = 148
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 54 VDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSV 113
V VF FV + E+ V R +++ + G+V PV + + VTIFS+
Sbjct: 6 VLQVFHQFVRRESEIASSLVLER------SLNRVQLLGRVGQDPVMRQVEGKNPVTIFSL 59
Query: 114 GTGGLF---DQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
T ++ + + D+ + WHRI+V L A + + K S +YVEG ++ Y
Sbjct: 60 ATNEMWRSGESEVYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEY 119
Query: 171 NDSIN 175
D N
Sbjct: 120 TDKNN 124
>gi|407804485|ref|ZP_11151307.1| single-stranded DNA-binding protein [Alcanivorax sp. W11-5]
gi|407021583|gb|EKE33349.1| single-stranded DNA-binding protein [Alcanivorax sp. W11-5]
Length = 180
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + L +G VT ++ T + + G + + +WHR+
Sbjct: 3 RGINKVILIGNLGADPETRFLPSGGAVTNVNIATSESWKDKQTGQ--MQERTEWHRVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N LG A + L K S VY+EG + R +
Sbjct: 61 NR-LGEIAGEYLKKGSKVYIEGSLRTRKW 88
>gi|409407736|ref|ZP_11256187.1| single-strand DNA-binding protein (helix-destabilizing protein)
[Herbaspirillum sp. GW103]
gi|386433487|gb|EIJ46313.1| single-strand DNA-binding protein (helix-destabilizing protein)
[Herbaspirillum sp. GW103]
Length = 173
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G + P + + NG+ VT +V T + + G K + +WHRI +
Sbjct: 4 VNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNTGEKK--ELTEWHRITFYRK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
EI G Y L K S +YVEG ++ R + D
Sbjct: 62 LAEIAGQY----LKKGSQIYVEGRLQTRKWQD 89
>gi|336451825|ref|ZP_08622262.1| single stranded DNA-binding protein [Idiomarina sp. A28L]
gi|336281638|gb|EGN74918.1| single stranded DNA-binding protein [Idiomarina sp. A28L]
Length = 194
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II G + P + +N + FSV T + + G + + +WHRI +
Sbjct: 4 RGVNKVIILGNLGQDPEVRYTQNSTAIANFSVATSESWKDKQTGEQ--KEITEWHRIVCY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG ++ R + +G+ K EI
Sbjct: 62 RRLAEIAGEY----LKKGSKVYIEGRLQTRKWQGQ-DGQDKYTTEI 102
>gi|312193368|ref|YP_003966093.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415759893|ref|ZP_11481834.1| single strand binding protein [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|261410564|gb|ACX80393.1| single-strand binding protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348654950|gb|EGY70451.1| single strand binding protein [Aggregatibacter
actinomycetemcomitans D17P-3]
Length = 145
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K II G++ + P + + NG+ V S+ T + + G + + +WHR+ +
Sbjct: 3 GVNKVIIVGRLGNEPEMRAMPNGEAVANISIATSESWTDKNTGERR--EVTEWHRVVFYR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VY+EG ++ R + D
Sbjct: 61 RQAEVCGEY----LHKGSQVYIEGRLKTRKWQD 89
>gi|414342269|ref|YP_006983790.1| single-strand DNA binding protein [Gluconobacter oxydans H24]
gi|411027604|gb|AFW00859.1| single-strand DNA binding protein [Gluconobacter oxydans H24]
Length = 186
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 88 IICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGS 147
I+ G + P + ++G + +V T ++ R G + + +WHR+ + N+ LG
Sbjct: 2 ILVGNLGKDPEVRNTQSGSKIVNLTVATSETWNDRQSGER--KERTEWHRVVIFNDRLGD 59
Query: 148 YAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
A + L K VY+EG++ R + D +G+ + E+ I R
Sbjct: 60 VAERFLRKGRKVYLEGELRTRKWTDQ-SGQERYTTEVTIDR 99
>gi|410654984|ref|YP_006957501.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
salamae]
gi|389597706|gb|AFK90455.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
salamae]
Length = 184
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K II G + P + + NG V S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVIIVGNLGQDPEVRYMPNGGAVASLSLATSESWRDKQTG--EMRENTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+++ A + L K + VY+EG + R + D +G + + EI + ++G
Sbjct: 62 GKLV-EIASEYLRKGAQVYIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGT 109
>gi|440226631|ref|YP_007333722.1| single-stranded DNA-binding protein [Rhizobium tropici CIAT 899]
gi|440038142|gb|AGB71176.1| single-stranded DNA-binding protein [Rhizobium tropici CIAT 899]
Length = 191
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + ++ T + R G + + +WHR+ + NE
Sbjct: 13 VNKVILVGNLGADPEIRRTQDGRPIANLNIATSETWRDRNSGER--KEKTEWHRVVIFNE 70
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K + VY+EG ++ R + D NG+ + E+ ++
Sbjct: 71 GLCKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGQDRYSTEVVLQ 113
>gi|291391222|ref|XP_002712158.1| PREDICTED: single-stranded DNA binding protein 1 [Oryctolagus
cuniculus]
Length = 148
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D D+ + +WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSRDNETYQMGDVSQKTKWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYMDKNN 124
>gi|260773657|ref|ZP_05882573.1| single-stranded DNA-binding protein [Vibrio metschnikovii CIP
69.14]
gi|260612796|gb|EEX37999.1| single-stranded DNA-binding protein [Vibrio metschnikovii CIP
69.14]
Length = 172
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILVGNLGADPEVRYMASGAAVANITLATSESWRDKTTGEQR--ERTEWHRVALY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|194334763|ref|YP_002016623.1| single-strand binding protein [Prosthecochloris aestuarii DSM 271]
gi|194312581|gb|ACF46976.1| single-strand binding protein [Prosthecochloris aestuarii DSM 271]
Length = 166
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K ++ G + P +++ +G++V F++ T + S +L + +WHRI
Sbjct: 3 RGLNKVMLIGHLGSDPELRVIPSGQSVANFTLATNESYKDS---SGNLQERTEWHRIVAW 59
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
L + L K VY+EG ++ R ++D+ G+ + EI
Sbjct: 60 GR-LAEICQQYLKKGRQVYIEGKLQTRSWDDTKTGDKRYATEI 101
>gi|429331908|ref|ZP_19212648.1| single-strand binding protein [Pseudomonas putida CSV86]
gi|428763419|gb|EKX85594.1| single-strand binding protein [Pseudomonas putida CSV86]
Length = 171
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VERTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|254785116|ref|YP_003072544.1| single-stranded DNA-binding protein [Teredinibacter turnerae T7901]
gi|237685420|gb|ACR12684.1| single-stranded DNA-binding protein [Teredinibacter turnerae T7901]
Length = 163
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G VT S+ T + + G + +WHR+A
Sbjct: 4 RGVNKVILVGNLGQDPETRYMPSGGAVTNISIATSESWKDKQTGQNQ--ERTEWHRVAFF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VYVEG + R + D
Sbjct: 62 GRLAEVAGEY----LRKGSKVYVEGSLRTRKWQD 91
>gi|429742508|ref|ZP_19276136.1| single-strand binding family protein [Neisseria sp. oral taxon 020
str. F0370]
gi|429168263|gb|EKY10107.1| single-strand binding family protein [Neisseria sp. oral taxon 020
str. F0370]
Length = 169
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
++K I+ G++ P + + NG+ V FS+ T ++ R G + + +WH I ++
Sbjct: 3 LNKVILIGRLGRDPEVRYMPNGEPVCNFSMATSETWNDRQSGQRQ--ERTEWHNITMYRR 60
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
EI G Y L K S +Y+EG I+ R Y D
Sbjct: 61 LAEIAGQY----LKKGSQIYIEGRIQSRKYQD 88
>gi|90580152|ref|ZP_01235959.1| single-strand DNA-binding protein [Photobacterium angustum S14]
gi|90438454|gb|EAS63638.1| single-strand DNA-binding protein [Vibrio angustum S14]
Length = 184
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILVGNLGNDPEVRYMPNGGAVANITIATSESWRDKNTGEQR--EKTEWHRVALY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + + G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQNQ-QGQDQYTTEVVVQ 105
>gi|89075304|ref|ZP_01161731.1| single-strand DNA-binding protein [Photobacterium sp. SKA34]
gi|89048985|gb|EAR54553.1| single-strand DNA-binding protein [Photobacterium sp. SKA34]
Length = 185
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGVNKVILVGNLGNDPEVRYMPNGGAVANITIATSESWRDKNTGEQR--EKTEWHRVALY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + + G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQNQ-QGQDQYTTEVVVQ 105
>gi|58617011|ref|YP_196210.1| single-strand binding protein [Ehrlichia ruminantium str. Gardel]
gi|58416623|emb|CAI27736.1| Single-strand binding protein [Ehrlichia ruminantium str. Gardel]
Length = 177
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K I+ G + P ++++NGK + FS+ T + + G + + +WH I V N
Sbjct: 26 GINKVILIGNLGKDPDIRVMQNGKEMASFSIATSESWVDKSSGIR--TEKTEWHNIVVFN 83
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
E L + K S VY+EG + R + D N
Sbjct: 84 EGLVRIIKNCIRKGSKVYIEGSLRTRKWTDQNN 116
>gi|148255735|ref|YP_001240320.1| single-stranded DNA-binding protein [Bradyrhizobium sp. BTAi1]
gi|146407908|gb|ABQ36414.1| single-strand binding protein [Bradyrhizobium sp. BTAi1]
Length = 166
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + R G+ + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETW--RDKGTGERKEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|374325458|ref|YP_005083655.1| putative single strand binding protein Ssb [Pseudomonas sp. MC1]
gi|359392982|gb|AEV45858.1| putative single strand binding protein Ssb [Pseudomonas sp. MC1]
Length = 169
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEKWTDKQTGQK--VEKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|254561436|ref|YP_003068531.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
DM4]
gi|254268714|emb|CAX24673.1| Single-stranded DNA-binding protein [Methylobacterium extorquens
DM4]
Length = 188
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH + ++N+
Sbjct: 5 VNKVILVGNLGRDPETRRLSSGDPVVNLRIATSESWKDKASGER--KEKTEWHSVVIYND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R + D +G K E+ ++R
Sbjct: 63 NLAKVAEQYLRKGSKVYIEGQLQTRKWTDQ-SGVEKYTTEVVLQR 106
>gi|85703230|ref|ZP_01034334.1| single-strand binding protein [Roseovarius sp. 217]
gi|85672158|gb|EAQ27015.1| single-strand binding protein [Roseovarius sp. 217]
Length = 170
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRATGER--RERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D +G+ K EI ++
Sbjct: 63 GLVRVAEQYLRKGSKVYLEGKLQTRKWQDQ-SGQDKYSTEIVLQ 105
>gi|432673217|ref|ZP_19908725.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
gi|431206635|gb|ELF05014.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
Length = 162
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG TV S+ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILIGTLGQDPEIRYIPNGGTVGRLSIATNESWRDKQTGQQK--EQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D G + EI + + G
Sbjct: 62 GK-LAEIASEYLRKGSQVYIEGKLKTRKWTDDA-GVERYTTEIIVSQGG 108
>gi|421853748|ref|ZP_16286408.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371477998|dbj|GAB31611.1| single-strand DNA binding protein Ssb [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 162
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + F++ T ++ R G + + +WHRI + NE
Sbjct: 5 VNKVILVGNLGKDPEVRHSQSGQKIVSFTLATSDTWNDRQSGERR--ERTEWHRIVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
L A + L K VY+EG ++ R + +G+ E+ I R G
Sbjct: 63 RLADVAERFLRKGRKVYLEGSLQTRKWQGQ-DGKDNYTTEVVIPRFG 108
>gi|395767867|ref|ZP_10448393.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
gi|395413121|gb|EJF79599.1| single-strand binding protein [Bartonella doshiae NCTC 12862]
Length = 148
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P K + +G V F + T + + K + +WH I V N
Sbjct: 2 LNKVMLIGRLGADPESKTMTSGAEVVNFRMATSESYTDKNTHQK--VEKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L A++ L K S VYVEG ++ R + D GE
Sbjct: 60 HLAKIALQYLNKGSKVYVEGKLQTRKWQDKNGGE 93
>gi|229592872|ref|YP_002874991.1| single-stranded DNA-binding protein [Pseudomonas fluorescens SBW25]
gi|229364738|emb|CAY52715.1| single-strand binding protein [Pseudomonas fluorescens SBW25]
Length = 171
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|118602520|ref|YP_903735.1| single-strand binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567459|gb|ABL02264.1| single-strand binding protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 163
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 4/108 (3%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K I+ G + K NGK VT SV T + + G K +WHR+++
Sbjct: 3 GINKVILVGNLGQDVELKYTSNGKAVTTLSVATSESWTDKNTGQK--VDKTEWHRVSLFG 60
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VYVEG++ R + D G + EI + +G
Sbjct: 61 K-LAEIASQYLHKGSKVYVEGNLRTRKWQDQ-TGTNRYTTEIVVGFNG 106
>gi|83951879|ref|ZP_00960611.1| single-strand binding protein [Roseovarius nubinhibens ISM]
gi|83836885|gb|EAP76182.1| single-strand binding protein [Roseovarius nubinhibens ISM]
Length = 175
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGER--RERTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG ++ R + D
Sbjct: 63 GLVRVAEQFLRKGSKVYIEGQLQTRKWQD 91
>gi|298291662|ref|YP_003693601.1| single-strand binding protein [Starkeya novella DSM 506]
gi|296928173|gb|ADH88982.1| single-strand binding protein [Starkeya novella DSM 506]
Length = 185
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + + G + + +WH + + NE
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGRVCNLRIATSETWRDKATGERK--ERTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K + VY+EG +E R D GE + E+ +R
Sbjct: 63 NLLRVAEQYLRKGTKVYIEGQLETRKATDQSGGE-RYFTEVVLR 105
>gi|167646841|ref|YP_001684504.1| ssDNA-binding protein [Caulobacter sp. K31]
gi|167349271|gb|ABZ72006.1| single-strand binding protein [Caulobacter sp. K31]
Length = 165
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGADPEIRTLSSGDRVANLRLATSESWRDRTSGERK--EKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A L K S+VY+EG I+ R + D+ +G K EI +++
Sbjct: 63 NLVKVAESYLRKGSTVYIEGAIQTRKWADA-SGVEKYSTEIVLQK 106
>gi|323143333|ref|ZP_08078022.1| single-strand binding family protein [Succinatimonas hippei YIT
12066]
gi|322416905|gb|EFY07550.1| single-strand binding family protein [Succinatimonas hippei YIT
12066]
Length = 231
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + D P+ + +G +VT S+ T + +R + + + + +WHR+ +
Sbjct: 3 RGVNKVILIGNLGDEPLCRTTHSGCSVTNISMVTNEV--RRNIDTGETTEYAEWHRVVMW 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ L A + L K S +YVEG + R + D G+ +++ EI
Sbjct: 61 GK-LADIAKQYLHKGSQIYVEGKLRTRSFMDK-QGQKRSVTEI 101
>gi|339477740|ref|YP_004706560.1| single-strand DNA-binding protein [Candidatus Moranella endobia
PCIT]
gi|338172291|gb|AEI74692.1| single-strand DNA-binding protein [Candidatus Moranella endobia
PCIT]
Length = 186
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQNPEVRYMPNGGAVANITLATSDSWRDKQTG--ETKEKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L AV+ L K S VY+EG ++ R + D +G + EI +
Sbjct: 62 GK-LAEVAVEYLRKGSQVYIEGYLQTRKWQDQ-SGHDRYTTEIVV 104
>gi|254476708|ref|ZP_05090094.1| single-strand binding protein [Ruegeria sp. R11]
gi|214030951|gb|EEB71786.1| single-strand binding protein [Ruegeria sp. R11]
Length = 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGER--REKTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 63 GLVRVAEQYLRKGSKVYIEGQLQTRKWQDQ-NGQDRYSTEVVLQ 105
>gi|154247549|ref|YP_001418507.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
gi|154161634|gb|ABS68850.1| single-strand binding protein [Xanthobacter autotrophicus Py2]
Length = 158
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P K ++G SV T + + G D + +WH + ++NE
Sbjct: 5 VNKCIIVGHLGRDPELKSFQSGGRACNLSVATSEHWRDKASG--DRKERTEWHSVVIYNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG IE R Y +G EI +R
Sbjct: 63 NLIGVAERYLKKGSKVYLEGQIETRKYEK--DGREVYTTEIVLR 104
>gi|94498072|ref|ZP_01304635.1| single-strand binding protein [Sphingomonas sp. SKA58]
gi|94422507|gb|EAT07545.1| single-strand binding protein [Sphingomonas sp. SKA58]
Length = 198
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K +NG V + T + R+ G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPEVKSFQNGGKVCNLRIATSESWKDRMTGER--KERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG + R + D
Sbjct: 63 GLVGVAERFLRKGSKVYIEGQLRTRKWQD 91
>gi|443731424|gb|ELU16561.1| hypothetical protein CAPTEDRAFT_121698 [Capitella teleta]
Length = 181
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + D P + G V S+ T + + G + + +WHR+ +
Sbjct: 3 RGINKVILIGNLGDDPDVRFTGQGAAVANLSLATSEAWKDKNTGQQQ--EKTEWHRVVIF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L A + L K S VY+EG ++ R + D +G+ + E+ +
Sbjct: 61 GK-LAEIAQQYLNKGSKVYIEGKLQTRKWQDK-DGQDRYTTEVVV 103
>gi|410091921|ref|ZP_11288467.1| single-stranded DNA-binding protein [Pseudomonas viridiflava
UASWS0038]
gi|409760780|gb|EKN45900.1| single-stranded DNA-binding protein [Pseudomonas viridiflava
UASWS0038]
Length = 184
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|294010285|ref|YP_003543745.1| single-stranded DNA-binding protein [Sphingobium japonicum UT26S]
gi|390168389|ref|ZP_10220351.1| single-stranded DNA-binding protein [Sphingobium indicum B90A]
gi|292673615|dbj|BAI95133.1| single-stranded DNA-binding protein [Sphingobium japonicum UT26S]
gi|389589057|gb|EIM67090.1| single-stranded DNA-binding protein [Sphingobium indicum B90A]
Length = 185
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K +NG V + T + R+ G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPEVKSFQNGGKVCNLRIATSESWKDRMSGERK--ERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG + R + D
Sbjct: 63 GLAGVAERFLRKGSKVYLEGQLRTRKWQD 91
>gi|399070072|ref|ZP_10749641.1| single stranded DNA-binding protein [Caulobacter sp. AP07]
gi|398044626|gb|EJL37434.1| single stranded DNA-binding protein [Caulobacter sp. AP07]
Length = 168
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + + +WHR+ + N+
Sbjct: 5 VNKVILVGNLGADPEIRTLSSGDRVANLRLATSETWRDRTSGERK--EKTEWHRVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A L K S+VY+EG I+ R + D +G K EI +++
Sbjct: 63 NLVKVAESYLRKGSTVYIEGAIQTRKWADQ-SGVEKYSTEIVLQK 106
>gi|254226022|ref|ZP_04919622.1| single-strand binding protein [Vibrio cholerae V51]
gi|125621478|gb|EAZ49812.1| single-strand binding protein [Vibrio cholerae V51]
Length = 178
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G + +V T + + G + + +WHR++V
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGDAMVNLTVATSETWRDKATGEQK--EKTEWHRVSVF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E +G YA K + VYV+G ++ R + D G+ + E+ +R
Sbjct: 62 GKTAEFIGEYARK----GTQVYVDGQLQTRKWQDQ-QGQERYTTEVVVR 105
>gi|428942403|ref|ZP_19015400.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
VA360]
gi|426298772|gb|EKV61154.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
VA360]
Length = 138
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V F++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGT 109
>gi|343502277|ref|ZP_08740134.1| single-stranded DNA-binding protein [Vibrio tubiashii ATCC 19109]
gi|418480119|ref|ZP_13049185.1| single-stranded DNA-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342815014|gb|EGU49943.1| single-stranded DNA-binding protein [Vibrio tubiashii ATCC 19109]
gi|384572312|gb|EIF02832.1| single-stranded DNA-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 178
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGSDPEVRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|262045536|ref|ZP_06018557.1| single-strand binding protein, partial [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|449060388|ref|ZP_21738047.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
hvKP1]
gi|259037095|gb|EEW38345.1| single-strand binding protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|448873893|gb|EMB08961.1| single-stranded DNA-binding protein, partial [Klebsiella pneumoniae
hvKP1]
Length = 131
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V F++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANFTLATSESWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGT 109
>gi|388259073|ref|ZP_10136247.1| single-strand binding protein [Cellvibrio sp. BR]
gi|387937031|gb|EIK43588.1| single-strand binding protein [Cellvibrio sp. BR]
Length = 196
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P K + +G VT SV T + + G + +WHR+
Sbjct: 3 RGINKVILIGNIGQDPEVKYMPSGGAVTNVSVATSETWKDKNTGQPQ--ERTEWHRVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N LG A + L K S VY+EG + R +
Sbjct: 61 NR-LGEIAGEYLKKGSKVYIEGALRTRKW 88
>gi|254429042|ref|ZP_05042749.1| single-strand binding protein [Alcanivorax sp. DG881]
gi|196195211|gb|EDX90170.1| single-strand binding protein [Alcanivorax sp. DG881]
Length = 171
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G VT + T + R G + + +WHR+
Sbjct: 3 RGVNKVILIGNLGADPETRFMPSGGAVTNVRLATSESWKDRQSGQ--MQERTEWHRVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N+ LG A + L K S VY+EG I R +
Sbjct: 61 NK-LGEIAGEYLKKGSKVYIEGSIRTRKW 88
>gi|237703632|ref|ZP_04534113.1| single strand DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|332280839|ref|ZP_08393252.1| single strand DNA-binding protein [Shigella sp. D9]
gi|91075172|gb|ABE10053.1| single strand DNA-binding protein [Escherichia coli UTI89]
gi|226901544|gb|EEH87803.1| single strand DNA-binding protein [Escherichia sp. 3_2_53FAA]
gi|332103191|gb|EGJ06537.1| single strand DNA-binding protein [Shigella sp. D9]
Length = 199
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 25 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 82
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 83 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 130
>gi|331644801|ref|ZP_08345918.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H736]
gi|331650080|ref|ZP_08351153.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M605]
gi|331680190|ref|ZP_08380849.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H591]
gi|115515464|gb|ABJ03539.1| single strand DNA-binding protein [Escherichia coli APEC O1]
gi|331035776|gb|EGI08014.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H736]
gi|331041025|gb|EGI13182.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M605]
gi|331071653|gb|EGI42989.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H591]
Length = 197
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 23 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 80
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 81 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 128
>gi|375109906|ref|ZP_09756145.1| single-strand binding protein [Alishewanella jeotgali KCTC 22429]
gi|393763400|ref|ZP_10352021.1| single-strand binding protein [Alishewanella agri BL06]
gi|397168964|ref|ZP_10492400.1| single-strand binding protein [Alishewanella aestuarii B11]
gi|374570075|gb|EHR41219.1| single-strand binding protein [Alishewanella jeotgali KCTC 22429]
gi|392605740|gb|EIW88630.1| single-strand binding protein [Alishewanella agri BL06]
gi|396089551|gb|EJI87125.1| single-strand binding protein [Alishewanella aestuarii B11]
Length = 194
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + G V S+ T + + G ++ + +WHR+ ++
Sbjct: 3 RGINKVILIGNLGQDPEVRYMPQGGAVANLSIATSESWKDKATG--EMKEQTEWHRVVIY 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
EI G Y L K S VY+EG ++ R + D
Sbjct: 61 QRLAEIAGEY----LRKGSKVYIEGKLKTRKWQDQ 91
>gi|365885618|ref|ZP_09424609.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 375]
gi|365285723|emb|CCD97140.1| Single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Bradyrhizobium sp. ORS 375]
Length = 165
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + R G+ + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETW--RDKGTGERKEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|183600864|ref|ZP_02962357.1| hypothetical protein PROSTU_04464 [Providencia stuartii ATCC 25827]
gi|188019647|gb|EDU57687.1| single-strand binding family protein [Providencia stuartii ATCC
25827]
Length = 157
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGHLGQDPEIRYMPNGGAVANLALATSESWRDKQTG--EMKEKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D +G+ + E+ + G
Sbjct: 62 GK-LAEIADEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNVGG 108
>gi|91794661|ref|YP_564312.1| single-strand binding protein [Shewanella denitrificans OS217]
gi|91716663|gb|ABE56589.1| single-strand binding protein [Shewanella denitrificans OS217]
Length = 231
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II G + P + + NG V +V T + + ++ +WHR+ +
Sbjct: 4 RGVNKVIIVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQER---TEWHRVVMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VY+EG ++ R + D +G+ K EI + + G+
Sbjct: 61 GKLAEITGEY----LRKGSQVYLEGKLQTRKWKDQ-SGQDKYTTEIVVDQSGS 108
>gi|75675758|ref|YP_318179.1| single-stranded DNA-binding protein [Nitrobacter winogradskyi
Nb-255]
gi|74420628|gb|ABA04827.1| single-strand binding protein [Nitrobacter winogradskyi Nb-255]
Length = 163
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + + T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSESWRDRTSGER--KERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + L K S VYVEG ++ R + D NG K E+ ++
Sbjct: 63 GLCKVVEQYLKKGSKVYVEGQLQTRKWTDQ-NGVEKYSTEVVLQ 105
>gi|410637765|ref|ZP_11348336.1| single-strand DNA-binding protein [Glaciecola lipolytica E3]
gi|410142733|dbj|GAC15541.1| single-strand DNA-binding protein [Glaciecola lipolytica E3]
Length = 189
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K I+ G + P + + NG V S+ T + + S + + +WHR+ ++
Sbjct: 4 KGVNKVILVGNIGQDPEVRYMPNGNAVANLSLATSESWKDQ---SGQMQERTEWHRLTMY 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI G Y L K S +YVEG ++ R + D +G+ K EI +
Sbjct: 61 RRLAEIAGEY----LRKGSQIYVEGKLQTRKWQDQ-SGQDKYTTEIIV 103
>gi|395792133|ref|ZP_10471571.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|395432647|gb|EJF98622.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 153
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G++ P K + +G + F + T + + K + +WH + V N
Sbjct: 2 LNKVTLIGRLGANPESKTMNSGAEIVNFRIATSESYTDKKTNQK--IEKTEWHSVVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K S VYVEG ++ R + D NG + EI +
Sbjct: 60 HLAKIALQYLNKGSKVYVEGKLQTRKWQDK-NGHERYSTEIVL 101
>gi|397662439|ref|YP_006503139.1| single-stranded DNA-binding protein [Taylorella equigenitalis ATCC
35865]
gi|394350618|gb|AFN36532.1| single-stranded DNA-binding protein [Taylorella equigenitalis ATCC
35865]
Length = 175
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G++ + P + G+ ++ S+GT +++ + G + + +WHR+ N
Sbjct: 3 VNKVILVGRLGNDPEVRSGTEGRVISTVSIGTNSVWNDKSSGER--REETEWHRVVFFNR 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
L A L K + VYVEG ++ R Y D+
Sbjct: 61 -LAEIARDYLRKGTQVYVEGRLKTRKYQDN 89
>gi|325272720|ref|ZP_08139073.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
gi|324102166|gb|EGB99659.1| single-stranded DNA-binding protein [Pseudomonas sp. TJI-51]
Length = 162
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T ++ + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWNDKQSGQKV--ERTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|170750135|ref|YP_001756395.1| single-strand binding protein [Methylobacterium radiotolerans JCM
2831]
gi|170656657|gb|ACB25712.1| single-strand binding protein [Methylobacterium radiotolerans JCM
2831]
Length = 186
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH + ++N+
Sbjct: 5 VNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGER--KEKTEWHSVVIYND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R + D+ +G K E+ ++R
Sbjct: 63 NLARVAEQYLRKGSKVYIEGQLQTRKWTDN-SGVEKYTTEVVLQR 106
>gi|295698774|ref|YP_003603429.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|295698775|ref|YP_003603430.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|291157043|gb|ADD79488.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
gi|291157389|gb|ADD79834.1| single-stranded DNA-binding protein [Candidatus Riesia pediculicola
USDA]
Length = 161
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG V S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILIGYLGQDPEIRYMPNGNAVANLSLATSENWKDKQTG--EMRERTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L + + L K S VY+EG ++ R + D NG+ + E+ +
Sbjct: 62 GK-LAEVSGEHLRKGSQVYIEGSLQTRKWQDQ-NGQDRYNTEVIV 104
>gi|99080637|ref|YP_612791.1| single-strand binding protein [Ruegeria sp. TM1040]
gi|99036917|gb|ABF63529.1| Single-strand binding protein [Ruegeria sp. TM1040]
Length = 159
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 6 LNKVMLIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNTGER--REKTEWHSVAIFNE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A + L K S VYVEG ++ R + D +G+ + EI +
Sbjct: 64 GLVRVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGQDRYSTEIVL 105
>gi|404319224|ref|ZP_10967157.1| single-strand binding protein [Ochrobactrum anthropi CTS-325]
Length = 172
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVAHLRIATSESWRDRQSGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG ++ E+ +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRDSTEVVLQK 106
>gi|359397583|ref|ZP_09190610.1| single-stranded DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
gi|357601092|gb|EHJ62784.1| single-stranded DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
Length = 193
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K +NG + + + T + R G + + +WH I+V +E
Sbjct: 4 VNKVILVGNLGADPEVKSFQNGGRIALMRIATSESWKDRNTGER--QERTEWHSISVQSE 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L + L K S +YVEG + R + D NG + E+ +
Sbjct: 62 GLVGVVERYLRKGSKIYVEGQLRTRKWQDQ-NGNDRYSTEVVL 103
>gi|209885356|ref|YP_002289213.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|337741022|ref|YP_004632750.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
gi|386030039|ref|YP_005950814.1| ssDNA-binding protein [Oligotropha carboxidovorans OM4]
gi|209873552|gb|ACI93348.1| single-stranded DNA-binding protein (SSB) [Oligotropha
carboxidovorans OM5]
gi|336095107|gb|AEI02933.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM4]
gi|336098686|gb|AEI06509.1| single-stranded DNA-binding protein Ssb [Oligotropha
carboxidovorans OM5]
Length = 160
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPDVRRTQDGRPIVNLSIATSDTWRDKATGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K + VY+EG ++ R + D +G+ K E+ ++
Sbjct: 63 GLCRVAEQYLKKGAKVYIEGALQTRKWQDK-DGKDKYSTEVVLQ 105
>gi|148560153|ref|YP_001259025.1| single-stranded DNA-binding protein family [Brucella ovis ATCC
25840]
gi|148371410|gb|ABQ61389.1| single-stranded DNA-binding protein family [Brucella ovis ATCC
25840]
Length = 168
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEIVLQK 106
>gi|307543854|ref|YP_003896333.1| single-strand DNA-binding protein [Halomonas elongata DSM 2581]
gi|307215878|emb|CBV41148.1| K03111 single-strand DNA-binding protein [Halomonas elongata DSM
2581]
Length = 205
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + +G V ++ T + R G + + +WHR+ +
Sbjct: 3 RGVNKVILIGNLGQDPEVRFTPSGTAVANLNLATTDTWTDRQSGQRQ--ERTEWHRVVMF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N+ L + + L K S VY+EG ++ R + D NG+ + EI
Sbjct: 61 NK-LAEISQQYLRKGSKVYIEGRLQTRKWQDQ-NGQDRYSTEIV 102
>gi|167554080|ref|ZP_02347821.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|418805214|ref|ZP_13360804.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|205321652|gb|EDZ09491.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|392767826|gb|EJA24587.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 185
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II G + P + + NG V S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVIIVGNLGQDPEIRYIPNGSAVANLSLATSESWRDKQTG--EMRENTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S V++EG + R + D +G + + EI + ++G
Sbjct: 62 GK-LAEVAGEYLRKGSQVFIEGQLRTRNWQDD-SGVTRYVTEIVVGQNGT 109
>gi|17987163|ref|NP_539797.1| single-strand binding protein [Brucella melitensis bv. 1 str. 16M]
gi|260565636|ref|ZP_05836120.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|265991184|ref|ZP_06103741.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|37999451|sp|Q8YHC2.1|SSB_BRUME RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|17982830|gb|AAL52061.1| single-strand binding protein [Brucella melitensis bv. 1 str. 16M]
gi|260151704|gb|EEW86798.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|263001968|gb|EEZ14543.1| single-stranded DNA-binding protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 168
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEIVLQK 106
>gi|365540996|ref|ZP_09366171.1| single-stranded DNA-binding protein [Vibrio ordalii ATCC 33509]
Length = 179
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|456355565|dbj|BAM90010.1| single-stranded DNA-binding protein controls activity of RecBCD
nuclease [Agromonas oligotrophica S58]
Length = 164
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + R G+ + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETW--RDKGTGERKEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|336125317|ref|YP_004567365.1| Single-strand DNA binding protein [Vibrio anguillarum 775]
gi|335343040|gb|AEH34323.1| Single-strand DNA binding protein [Vibrio anguillarum 775]
Length = 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + + G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGNDPEIRYMPGGAAVANITIATSDSWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|323496087|ref|ZP_08101147.1| single-stranded DNA-binding protein [Vibrio sinaloensis DSM 21326]
gi|323318831|gb|EGA71782.1| single-stranded DNA-binding protein [Vibrio sinaloensis DSM 21326]
Length = 179
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGSDPEVRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|306841829|ref|ZP_07474512.1| single-strand binding protein [Brucella sp. BO2]
gi|306288110|gb|EFM59504.1| single-strand binding protein [Brucella sp. BO2]
Length = 169
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEIVLQK 106
>gi|306843968|ref|ZP_07476563.1| single-strand binding protein [Brucella inopinata BO1]
gi|306275723|gb|EFM57447.1| single-strand binding protein [Brucella inopinata BO1]
Length = 169
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEIVLQK 106
>gi|23501980|ref|NP_698107.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|161619055|ref|YP_001592942.1| single-strand binding protein [Brucella canis ATCC 23365]
gi|163843371|ref|YP_001627775.1| single-strand binding protein [Brucella suis ATCC 23445]
gi|225627576|ref|ZP_03785613.1| single-strand binding protein [Brucella ceti str. Cudo]
gi|225852604|ref|YP_002732837.1| single-strand binding protein [Brucella melitensis ATCC 23457]
gi|256263903|ref|ZP_05466435.1| single-stranded DNA-binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|260566360|ref|ZP_05836830.1| single-stranded DNA-binding protein [Brucella suis bv. 4 str. 40]
gi|261214097|ref|ZP_05928378.1| helix-destabilizing protein [Brucella abortus bv. 3 str. Tulya]
gi|261219450|ref|ZP_05933731.1| single-stranded DNA-binding protein [Brucella ceti M13/05/1]
gi|261222270|ref|ZP_05936551.1| single-stranded DNA-binding protein [Brucella ceti B1/94]
gi|261314173|ref|ZP_05953370.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261317738|ref|ZP_05956935.1| single-stranded DNA-binding protein [Brucella pinnipedialis B2/94]
gi|261321946|ref|ZP_05961143.1| single-stranded DNA-binding protein [Brucella ceti M644/93/1]
gi|261325193|ref|ZP_05964390.1| single-stranded DNA-binding protein [Brucella neotomae 5K33]
gi|261752409|ref|ZP_05996118.1| single-stranded DNA-binding protein [Brucella suis bv. 5 str. 513]
gi|261755069|ref|ZP_05998778.1| single-stranded DNA-binding protein [Brucella suis bv. 3 str. 686]
gi|261758294|ref|ZP_06002003.1| single-stranded DNA-binding protein [Brucella sp. F5/99]
gi|265988769|ref|ZP_06101326.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|265995020|ref|ZP_06107577.1| single-stranded DNA-binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|340790721|ref|YP_004756186.1| single-stranded DNA-binding protein family [Brucella pinnipedialis
B2/94]
gi|376276284|ref|YP_005116723.1| single-strand binding protein [Brucella canis HSK A52141]
gi|376280774|ref|YP_005154780.1| ssDNA-binding protein [Brucella suis VBI22]
gi|384211468|ref|YP_005600550.1| single-strand binding protein [Brucella melitensis M5-90]
gi|384224768|ref|YP_005615932.1| ssDNA-binding protein [Brucella suis 1330]
gi|384408577|ref|YP_005597198.1| single-strand binding protein [Brucella melitensis M28]
gi|384445163|ref|YP_005603882.1| single-strand binding protein [Brucella melitensis NI]
gi|37999436|sp|Q8G0J1.1|SSB_BRUSU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|23347929|gb|AAN30022.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|161335866|gb|ABX62171.1| single-strand binding protein [Brucella canis ATCC 23365]
gi|163674094|gb|ABY38205.1| single-strand binding protein [Brucella suis ATCC 23445]
gi|225617581|gb|EEH14626.1| single-strand binding protein [Brucella ceti str. Cudo]
gi|225640969|gb|ACO00883.1| single-strand binding protein [Brucella melitensis ATCC 23457]
gi|260155878|gb|EEW90958.1| single-stranded DNA-binding protein [Brucella suis bv. 4 str. 40]
gi|260915704|gb|EEX82565.1| helix-destabilizing protein [Brucella abortus bv. 3 str. Tulya]
gi|260920854|gb|EEX87507.1| single-stranded DNA-binding protein [Brucella ceti B1/94]
gi|260924539|gb|EEX91107.1| single-stranded DNA-binding protein [Brucella ceti M13/05/1]
gi|261294636|gb|EEX98132.1| single-stranded DNA-binding protein [Brucella ceti M644/93/1]
gi|261296961|gb|EEY00458.1| single-stranded DNA-binding protein [Brucella pinnipedialis B2/94]
gi|261301173|gb|EEY04670.1| single-stranded DNA-binding protein [Brucella neotomae 5K33]
gi|261303199|gb|EEY06696.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M163/99/10]
gi|261738278|gb|EEY26274.1| single-stranded DNA-binding protein [Brucella sp. F5/99]
gi|261742162|gb|EEY30088.1| single-stranded DNA-binding protein [Brucella suis bv. 5 str. 513]
gi|261744822|gb|EEY32748.1| single-stranded DNA-binding protein [Brucella suis bv. 3 str. 686]
gi|262766133|gb|EEZ11922.1| single-stranded DNA-binding protein [Brucella melitensis bv. 3 str.
Ether]
gi|263094035|gb|EEZ17969.1| single-stranded DNA-binding protein [Brucella melitensis bv. 2 str.
63/9]
gi|264660966|gb|EEZ31227.1| single-stranded DNA-binding protein [Brucella pinnipedialis
M292/94/1]
gi|326409124|gb|ADZ66189.1| single-strand binding protein [Brucella melitensis M28]
gi|326538831|gb|ADZ87046.1| single-strand binding protein [Brucella melitensis M5-90]
gi|340559180|gb|AEK54418.1| single-stranded DNA-binding protein family [Brucella pinnipedialis
B2/94]
gi|343382948|gb|AEM18440.1| single-stranded DNA-binding protein family [Brucella suis 1330]
gi|349743154|gb|AEQ08697.1| single-strand binding protein [Brucella melitensis NI]
gi|358258373|gb|AEU06108.1| single-stranded DNA-binding protein family [Brucella suis VBI22]
gi|363404851|gb|AEW15146.1| single-strand binding protein [Brucella canis HSK A52141]
Length = 168
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEIVLQK 106
>gi|28867884|ref|NP_790503.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213969244|ref|ZP_03397382.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato T1]
gi|301381751|ref|ZP_07230169.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato Max13]
gi|302061049|ref|ZP_07252590.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato K40]
gi|302189308|ref|ZP_07265981.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae 642]
gi|422591734|ref|ZP_16666372.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|422653841|ref|ZP_16716598.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|422659573|ref|ZP_16721997.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|440723613|ref|ZP_20903975.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34876]
gi|440726933|ref|ZP_20907176.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34881]
gi|37999394|sp|Q889U1.1|SSB_PSESM RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|28851120|gb|AAO54198.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213925922|gb|EEB59479.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato T1]
gi|330879412|gb|EGH13561.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330966881|gb|EGH67141.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331018190|gb|EGH98246.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|440359390|gb|ELP96702.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34876]
gi|440364983|gb|ELQ02099.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP34881]
Length = 189
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|90576561|ref|YP_534803.1| putative single strand binding protein Ssb [Pseudomonas putida]
gi|90567914|dbj|BAE92137.1| putative single strand binding protein Ssb [Pseudomonas putida]
Length = 149
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEKWTDKQTGQK--VEKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|90416591|ref|ZP_01224522.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[gamma proteobacterium HTCC2207]
gi|90331790|gb|EAS47018.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[gamma proteobacterium HTCC2207]
Length = 171
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K II G P + L +G VT S+ T + + G + + +WH++
Sbjct: 3 RGINKVIIVGNCGQDPETRYLPSGGAVTNMSLATSESWKDKNTGEQQ--ERTEWHKVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N LG A + L K S VYVEG + R +
Sbjct: 61 NR-LGEIAGEYLKKGSKVYVEGSLRTRKW 88
>gi|404319339|ref|ZP_10967272.1| single-strand binding protein [Ochrobactrum anthropi CTS-325]
Length = 151
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+KAI+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKAILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
+ A + L K + VY+EG ++ R + D NG + E+ +++
Sbjct: 63 NVAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEVVLQK 106
>gi|395787249|ref|ZP_10466850.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
gi|395411673|gb|EJF78194.1| single-strand binding protein [Bartonella birtlesii LL-WM9]
Length = 150
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G++ P K + +G V F + T + + K + +WH I V N
Sbjct: 2 LNKVTLIGRLGANPESKTMPSGGEVVNFRMATSESYTDKKTNQKV--EKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L A++ L K S VYVEG ++ R + D GE
Sbjct: 60 NLAKIALQYLSKGSKVYVEGKLQTRKWKDKNGGE 93
>gi|213967429|ref|ZP_03395577.1| single-strand DNA-binding protein [Pseudomonas syringae pv. tomato
T1]
gi|301382128|ref|ZP_07230546.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato Max13]
gi|302058968|ref|ZP_07250509.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato K40]
gi|213927730|gb|EEB61277.1| single-strand DNA-binding protein [Pseudomonas syringae pv. tomato
T1]
Length = 163
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 1 MRGVNKVILVGTCGQDPDVRYLPNGNAVTNLSLATSEQWTDKQSGQK--VEKTEWHRVSL 58
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 59 FGKVAEIAGEY----LRKGSQVYIEGKLQTREW 87
>gi|152980525|ref|YP_001355029.1| single-strand DNA-binding protein [Janthinobacterium sp. Marseille]
gi|151280602|gb|ABR89012.1| single-strand DNA-binding protein [Janthinobacterium sp. Marseille]
Length = 162
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K II G + P + + NG+ VT +V T + + G K + +WHRI + +
Sbjct: 4 VNKVIIVGNLGRDPETRYMPNGEAVTNVAVATTESWKDKNSGDK--KEITEWHRITFYRK 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S+VYVEG ++ R + D
Sbjct: 62 -LAEIAGQYLKKGSAVYVEGRLQTRKWTD 89
>gi|157148035|ref|YP_001455354.1| single-stranded DNA-binding protein [Citrobacter koseri ATCC
BAA-895]
gi|157085240|gb|ABV14918.1| hypothetical protein CKO_03842 [Citrobacter koseri ATCC BAA-895]
Length = 178
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDKYTTEVVVNVGGT 109
>gi|17233435|ref|NP_490554.1| single-strand DNA binding protein [Salmonella typhimurium LT2]
gi|167994805|ref|ZP_02575896.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261888748|ref|YP_003264437.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|305696900|ref|YP_003864215.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|378448101|ref|YP_005235593.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378987357|ref|YP_005250512.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378991900|ref|YP_005255063.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379699143|ref|YP_005245613.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383499214|ref|YP_005412562.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|386730698|ref|YP_006203674.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|410652117|ref|YP_006955236.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|410652258|ref|YP_006955376.1| SsB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|410654644|ref|YP_006955606.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|422028907|ref|ZP_16375198.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422033965|ref|ZP_16380018.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427558538|ref|ZP_18930526.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427578499|ref|ZP_18935448.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427599989|ref|ZP_18940271.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427622855|ref|ZP_18944951.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427646905|ref|ZP_18949806.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427658948|ref|ZP_18954545.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427664182|ref|ZP_18959408.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427682743|ref|ZP_18964319.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427802428|ref|ZP_18969817.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|37999751|sp|Q93GP7.1|SSB2_SALTY RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2;
AltName: Full=Helix-destabilizing protein 2
gi|16445256|gb|AAL23474.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205327384|gb|EDZ14148.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261857336|emb|CBA11409.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|267990100|gb|ACY86497.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|304376202|dbj|BAJ15364.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|312915786|dbj|BAJ39759.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|323132985|gb|ADX20414.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332991441|gb|AEF10423.1| single-strand binding protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|365818947|gb|AEX00738.1| Ssb [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|365819088|gb|AEX00878.1| SsB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|374347589|dbj|BAL48727.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium]
gi|380467499|gb|AFD61437.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|381139540|emb|CCF76747.1| single-strand DNA binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|414010782|gb|EKS94774.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414011113|gb|EKS95086.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414011605|gb|EKS95553.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414024924|gb|EKT08277.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414025377|gb|EKT08706.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414028408|gb|EKT11597.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414039929|gb|EKT22578.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414040557|gb|EKT23167.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414045352|gb|EKT27760.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414053936|gb|EKT35902.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414058105|gb|EKT39811.1| single-stranded binding protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 172
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + R+ ++ + +WHR+ V
Sbjct: 4 RGVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETW--RVRQDGEMREHTEWHRVVVF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVIVNVGGT 109
>gi|423713786|ref|ZP_17688046.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421903|gb|EJF88126.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
Length = 147
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P +K + NG V F + T + + K +WH + V N
Sbjct: 2 LNKVILIGYLGANPEKKTMNNGTEVVNFRMATSESYTDKRTNQK--VSKTEWHSVVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K VY+EG ++ R + D NG+ EI +
Sbjct: 60 HLAKIALQYLHKGRKVYIEGQLQTRKWQDK-NGQDHYTTEIVL 101
>gi|423123270|ref|ZP_17110953.1| single-strand binding protein [Klebsiella oxytoca 10-5246]
gi|376391097|gb|EHT03778.1| single-strand binding protein [Klebsiella oxytoca 10-5246]
Length = 180
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTG--EMRENTEWHRVVMF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
E+ G Y L K + VY+EG + R + D G + + E+ + ++G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRNWQDDA-GATRYVTEVLVGQNG 108
>gi|345875109|ref|ZP_08826905.1| hypothetical protein l11_09890 [Neisseria weaveri LMG 5135]
gi|417958194|ref|ZP_12601110.1| hypothetical protein l13_15220 [Neisseria weaveri ATCC 51223]
gi|343967256|gb|EGV35505.1| hypothetical protein l13_15220 [Neisseria weaveri ATCC 51223]
gi|343969536|gb|EGV37748.1| hypothetical protein l11_09890 [Neisseria weaveri LMG 5135]
Length = 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + + NG+ V FS+ T +++ R G + + +WH I ++
Sbjct: 4 LNKVILIGNLGRDPEIRYMPNGEAVCNFSIATSEVWNDRNSGQRQ--ERTEWHNITLYRR 61
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVY 170
L A + L K SSVY+EG I+ R Y
Sbjct: 62 -LAEVAGQYLRKGSSVYIEGRIQSRKY 87
>gi|62290017|ref|YP_221810.1| ssDNA-binding protein [Brucella abortus bv. 1 str. 9-941]
gi|82699945|ref|YP_414519.1| single-strand binding protein [Brucella melitensis biovar Abortus
2308]
gi|189024258|ref|YP_001935026.1| ssDNA-binding protein [Brucella abortus S19]
gi|237815526|ref|ZP_04594523.1| single-strand binding protein [Brucella abortus str. 2308 A]
gi|260546571|ref|ZP_05822310.1| single-stranded DNA-binding protein [Brucella abortus NCTC 8038]
gi|260754846|ref|ZP_05867194.1| helix-destabilizing protein [Brucella abortus bv. 6 str. 870]
gi|260758063|ref|ZP_05870411.1| helix-destabilizing protein [Brucella abortus bv. 4 str. 292]
gi|260761887|ref|ZP_05874230.1| helix-destabilizing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260883858|ref|ZP_05895472.1| single-stranded DNA-binding protein [Brucella abortus bv. 9 str.
C68]
gi|297248418|ref|ZP_06932136.1| single-stranded DNA-binding protein [Brucella abortus bv. 5 str.
B3196]
gi|376273165|ref|YP_005151743.1| single-stranded DNA-binding protein [Brucella abortus A13334]
gi|423166793|ref|ZP_17153496.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI435a]
gi|423170833|ref|ZP_17157508.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI474]
gi|423173085|ref|ZP_17159756.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI486]
gi|423178222|ref|ZP_17164866.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI488]
gi|423180263|ref|ZP_17166904.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI010]
gi|423183395|ref|ZP_17170032.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI016]
gi|423185665|ref|ZP_17172279.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI021]
gi|423188801|ref|ZP_17175411.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI259]
gi|88941989|sp|Q2YPX7.1|SSB_BRUA2 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|88941990|sp|P0C118.1|SSB_BRUAB RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|144126|gb|AAA16818.1| single stranded DNA binding protein [Brucella abortus]
gi|62196149|gb|AAX74449.1| single-stranded DNA-binding protein family [Brucella abortus bv. 1
str. 9-941]
gi|82616046|emb|CAJ11082.1| Single-strand binding protein [Brucella melitensis biovar Abortus
2308]
gi|189019830|gb|ACD72552.1| Single-strand binding protein [Brucella abortus S19]
gi|237788824|gb|EEP63035.1| single-strand binding protein [Brucella abortus str. 2308 A]
gi|260095621|gb|EEW79498.1| single-stranded DNA-binding protein [Brucella abortus NCTC 8038]
gi|260668381|gb|EEX55321.1| helix-destabilizing protein [Brucella abortus bv. 4 str. 292]
gi|260672319|gb|EEX59140.1| helix-destabilizing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260674954|gb|EEX61775.1| helix-destabilizing protein [Brucella abortus bv. 6 str. 870]
gi|260873386|gb|EEX80455.1| single-stranded DNA-binding protein [Brucella abortus bv. 9 str.
C68]
gi|297175587|gb|EFH34934.1| single-stranded DNA-binding protein [Brucella abortus bv. 5 str.
B3196]
gi|363400771|gb|AEW17741.1| single-stranded DNA-binding protein [Brucella abortus A13334]
gi|374539411|gb|EHR10915.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI474]
gi|374543024|gb|EHR14508.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI435a]
gi|374543640|gb|EHR15122.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI486]
gi|374545461|gb|EHR16922.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI488]
gi|374548827|gb|EHR20274.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI010]
gi|374549458|gb|EHR20901.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI016]
gi|374558459|gb|EHR29852.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI259]
gi|374559756|gb|EHR31141.1| single-stranded DNA-binding protein [Brucella abortus bv. 1 str.
NI021]
Length = 168
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSKEIVLQK 106
>gi|388547649|ref|ZP_10150911.1| single-stranded DNA-binding protein [Pseudomonas sp. M47T1]
gi|388274249|gb|EIK93849.1| single-stranded DNA-binding protein [Pseudomonas sp. M47T1]
Length = 172
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQK--VERTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|319778676|ref|YP_004129589.1| ssDNA-binding protein [Taylorella equigenitalis MCE9]
gi|317108700|gb|ADU91446.1| Single-stranded DNA-binding protein [Taylorella equigenitalis MCE9]
gi|399115296|emb|CCG18095.1| single-stranded DNA-binding protein [Taylorella equigenitalis
14/56]
Length = 175
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G++ + P + G+ ++ S+GT +++ + G + + +WHR+ N
Sbjct: 3 VNKVILVGRLGNDPEVRSGTEGRVISTVSIGTNSVWNDKSSGER--REETEWHRVVFFNR 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
L A L K + VYVEG ++ R Y D+
Sbjct: 61 -LAEIARDYLRKGTQVYVEGRLKTRKYQDN 89
>gi|381159222|ref|ZP_09868455.1| single stranded DNA-binding protein [Thiorhodovibrio sp. 970]
gi|380880580|gb|EIC22671.1| single stranded DNA-binding protein [Thiorhodovibrio sp. 970]
Length = 205
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + + P + NG VT S+ T + R G + +WHRI +
Sbjct: 4 RGVNKVILIGNLGNDPEIRYFPNGDAVTNLSIATSESWKDRNTGEPQ--ERTEWHRIVIR 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
+ L A + L K S V++EG + R +
Sbjct: 62 GK-LAEIAKQYLRKGSKVFIEGKLRTRKW 89
>gi|422604426|ref|ZP_16676443.1| single-stranded DNA-binding protein [Pseudomonas syringae pv. mori
str. 301020]
gi|330888085|gb|EGH20746.1| single-stranded DNA-binding protein [Pseudomonas syringae pv. mori
str. 301020]
Length = 187
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|395793469|ref|ZP_10472871.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713793|ref|ZP_17688053.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395421887|gb|EJF88112.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395430851|gb|EJF96880.1| single-strand binding protein [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 145
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P +K + NG V F + T + + K +WH + V N
Sbjct: 2 LNKVILIGYLGANPEKKTMNNGTEVVNFRMATSESYTDKRTNQK--VSKTEWHSVVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K VY+EG ++ R + D NG+ EI +
Sbjct: 60 HLAKIALQYLHKGRKVYIEGQLQTRKWQDK-NGQDHYTTEIVL 101
>gi|300724705|ref|YP_003714030.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
gi|297631247|emb|CBJ91942.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus nematophila ATCC 19061]
Length = 171
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTG--EMREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L A + L K S VY+EG ++ R + D +G+ + EI +
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVV 104
>gi|56550592|ref|YP_161658.1| putative single-strand binding protein SSB [Cupriavidus
metallidurans CH34]
gi|94152685|ref|YP_582087.1| single-stranded DNA-binding protein [Cupriavidus metallidurans
CH34]
gi|56410298|emb|CAI30180.1| putative single-strand binding protein SSB [Cupriavidus
metallidurans CH34]
gi|93359051|gb|ABF13137.1| Single-stranded DNA-binding protein (Ssb/TraC2)(plasmid backbone)
[Cupriavidus metallidurans CH34]
Length = 190
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K I+ G + P + L +G VT + T + + S + + +WHRIA
Sbjct: 4 VNKVILVGNLGADPETRYLPSGDAVTNIRIATTDRYKDKQ--SNEFKEATEWHRIAFFGK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
EI G Y L K SSVY+EG I R + D +G+ K EI
Sbjct: 62 LAEIAGQY----LRKGSSVYIEGRIRTRKWQDQ-SGQDKYSTEIV 101
>gi|256369529|ref|YP_003107039.1| single-stranded DNA-binding protein family [Brucella microti CCM
4915]
gi|255999691|gb|ACU48090.1| single-stranded DNA-binding protein family [Brucella microti CCM
4915]
Length = 168
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEIVLQK 106
>gi|329890208|ref|ZP_08268551.1| single-stranded DNA-binding protein [Brevundimonas diminuta ATCC
11568]
gi|328845509|gb|EGF95073.1| single-stranded DNA-binding protein [Brevundimonas diminuta ATCC
11568]
Length = 166
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L NG V + T + + G + + +WH + + N+
Sbjct: 5 VNKVILVGNLGRDPEIRSLNNGDRVANLRIATSETWRDKATGER--KEKTEWHSVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
+ A L K S+VYVEG ++ R + D G K EI I+R
Sbjct: 63 NIVKVAENYLKKGSTVYVEGSLQTRKWTDQ-QGVEKYSTEIVIQR 106
>gi|290474572|ref|YP_003467452.1| single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
gi|289173885|emb|CBJ80672.1| Single-stranded DNA-binding protein [Xenorhabdus bovienii SS-2004]
Length = 169
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + L G TV + S+ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGYLGQDPEIRYLPAGGTVAMLSMATSDNWRDKQTG--EIREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG ++ R + D+ G+ + E+ + +G+
Sbjct: 62 GK-LADIAAEYLQKGAQVYIEGQLKTRKWQDN-QGQDRYSTEVVVNVNGS 109
>gi|183597300|ref|ZP_02958793.1| hypothetical protein PROSTU_00550 [Providencia stuartii ATCC 25827]
gi|386742961|ref|YP_006216140.1| single-stranded DNA-binding protein [Providencia stuartii MRSN
2154]
gi|188023320|gb|EDU61360.1| single-strand binding family protein [Providencia stuartii ATCC
25827]
gi|384479654|gb|AFH93449.1| single-stranded DNA-binding protein [Providencia stuartii MRSN
2154]
Length = 171
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTG--EMREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG ++ R + D +G+ + E+ + G+
Sbjct: 62 GK-LAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNIGGS 109
>gi|157964985|ref|YP_001499809.1| single-stranded DNA-binding protein [Rickettsia massiliae MTU5]
gi|157844761|gb|ABV85262.1| Single-stranded DNA-binding protein [Rickettsia massiliae MTU5]
Length = 152
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G V P + GK + S+ T + RI + + +WHR+ + ++
Sbjct: 5 LNKVILIGNVGRDPEVRTTGEGKKIINLSLATTETWKDRITSER--KERTEWHRVVIFSD 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L S + + K S +Y+EG ++ R +ND+ +G+ K E+ ++
Sbjct: 63 GLVSVVERYVTKGSKLYIEGSLQTRKWNDN-SGQEKYTTEVVLQ 105
>gi|399018108|ref|ZP_10720293.1| single stranded DNA-binding protein [Herbaspirillum sp. CF444]
gi|398101894|gb|EJL92091.1| single stranded DNA-binding protein [Herbaspirillum sp. CF444]
Length = 168
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G + P + + NG+ VT +V T + + G K + +WHRI +
Sbjct: 4 VNKVIIVGNLGRDPETRYMPNGEAVTNVAVATTESWKDKSSGEK--KELTEWHRITFYRK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
EI G Y L K S VYVEG ++ R + D +G K EI
Sbjct: 62 LAEIAGQY----LKKGSQVYVEGRLQTRKWTDK-DGVEKYTTEII 101
>gi|423116333|ref|ZP_17104024.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
gi|376378515|gb|EHS91274.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5245]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V S+ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYIPNGSAVATLSLATSESWRDKQSGEQK--EVTEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VY+EG + R + D G+ K E+ + G
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLRTRKWTDQA-GQDKYTTEVVVNIGGT 109
>gi|416021271|ref|ZP_11566945.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320321152|gb|EFW77293.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 198
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQK--VEKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LHKGSQVYIEGKLQTREW 88
>gi|320540007|ref|ZP_08039664.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
gi|320029930|gb|EFW11952.1| putative single-stranded DNA-binding protein [Serratia symbiotica
str. Tucson]
Length = 162
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG VT S+ T + + G + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGNAVTGLSLATSESWRDKQTGENR--ENTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
+ L A + L K S VY+EG + R + D+
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDN 92
>gi|418020609|ref|ZP_12659852.1| single stranded DNA-binding protein (ssb) [Candidatus Regiella
insecticola R5.15]
gi|347604050|gb|EGY28773.1| single stranded DNA-binding protein (ssb) [Candidatus Regiella
insecticola R5.15]
Length = 177
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGNAVANITLATSESWRDKATGEQK--EKTEWHRVVLY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L A + L K S VY+EG ++ R + D +G+ + E+ +
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGTLQTRKWQDQ-SGQDRYTTEVVV 104
>gi|419241318|ref|ZP_13783987.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC9D]
gi|378097689|gb|EHW59437.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli DEC9D]
Length = 179
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G+ P + + NG V V T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILVGRQGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMREQTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K VY+EG + R + D NG + + EI ++ G
Sbjct: 62 GKLAEVAGEY----LRKGVQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 108
>gi|332187056|ref|ZP_08388797.1| single-strand binding family protein [Sphingomonas sp. S17]
gi|332013066|gb|EGI55130.1| single-strand binding family protein [Sphingomonas sp. S17]
Length = 155
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH + + NE
Sbjct: 5 VNKVILVGNLGRDPESRSFQNGGKVVELRIATSESWKDRNSGER--KEKTEWHTVKIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L + A + L K S VYVEG + R + D
Sbjct: 63 GLANVAERYLRKGSKVYVEGMLTTRKWQD 91
>gi|319408686|emb|CBI82341.1| Single-stranded DNA-binding protein [Bartonella schoenbuchensis R1]
gi|319409120|emb|CBI82764.1| Single-stranded DNA-binding protein [Bartonella schoenbuchensis R1]
Length = 149
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G + P + + +G V F +GT + + G K + +WH I V N
Sbjct: 2 LNKVTLIGYLGADPESRTMPSGVEVANFRIGTSQRYVDKKTGEK--VEKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K S VYVEG ++ R + D +G+ EI +
Sbjct: 60 HLAKVALQYLGKGSKVYVEGQLQTRKWQDK-SGQTHYTTEIVL 101
>gi|430808964|ref|ZP_19436079.1| single-stranded DNA-binding protein [Cupriavidus sp. HMR-1]
gi|429498573|gb|EKZ97079.1| single-stranded DNA-binding protein [Cupriavidus sp. HMR-1]
Length = 189
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K I+ G + P + L +G VT + T + + S + + +WHRIA
Sbjct: 4 VNKVILVGNLGADPETRYLPSGDAVTNIRIATTDRYKDKQ--SNEFKEATEWHRIAFFGK 61
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
EI G Y L K SSVY+EG I R + D +G+ K EI
Sbjct: 62 LAEIAGQY----LRKGSSVYIEGRIRTRKWQDQ-SGQDKYSTEIV 101
>gi|71735403|ref|YP_276653.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483216|ref|ZP_05637257.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|289625667|ref|ZP_06458621.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289648911|ref|ZP_06480254.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|416018884|ref|ZP_11565797.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|416021775|ref|ZP_11567066.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422584588|ref|ZP_16659693.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|422597967|ref|ZP_16672234.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|422640774|ref|ZP_16704200.1| single-stranded DNA-binding protein [Pseudomonas syringae Cit 7]
gi|422683108|ref|ZP_16741370.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|440742713|ref|ZP_20922036.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
gi|71555956|gb|AAZ35167.1| single-strand binding protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298156377|gb|EFH97475.1| Single-stranded DNA-binding protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322291|gb|EFW78385.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320331949|gb|EFW87885.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330869400|gb|EGH04109.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330953164|gb|EGH53424.1| single-stranded DNA-binding protein [Pseudomonas syringae Cit 7]
gi|330988251|gb|EGH86354.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331012444|gb|EGH92500.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tabaci str. ATCC 11528]
gi|440377017|gb|ELQ13674.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
Length = 187
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|422619336|ref|ZP_16688027.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|422661334|ref|ZP_16723688.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|424069637|ref|ZP_17807083.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443642053|ref|ZP_21125903.1| Single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B64]
gi|330899707|gb|EGH31126.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
japonica str. M301072]
gi|330982565|gb|EGH80668.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|407994309|gb|EKG34894.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|443282070|gb|ELS41075.1| Single-stranded DNA-binding protein [Pseudomonas syringae pv.
syringae B64]
Length = 188
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|86749830|ref|YP_486326.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
HaA2]
gi|86572858|gb|ABD07415.1| single-strand binding protein [Rhodopseudomonas palustris HaA2]
Length = 167
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + + T + R G + + +WHR+ + +E
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSESWRDRATGERK--EKTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L A + L K S VY+EG ++ R + D E
Sbjct: 63 GLCKIAEQYLKKGSKVYLEGQLQTRKWTDQSGAE 96
>gi|240850554|ref|YP_002971954.1| single-strand binding protein [Bartonella grahamii as4aup]
gi|240267677|gb|ACS51265.1| single-strand binding protein [Bartonella grahamii as4aup]
Length = 142
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 88 IICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGS 147
++ G++ P K + +G V FS+ T + + K + +WH + + N L
Sbjct: 1 MLIGRLGADPESKTMNSGTEVVNFSIATSESYTDKNTHQK--VEKTEWHSVVIFNPHLAK 58
Query: 148 YAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
A++ L K S VYVEG ++ R + D NG + EI +
Sbjct: 59 IALQYLNKGSKVYVEGKLQTRKWQDK-NGHDRYTTEIVL 96
>gi|395782511|ref|ZP_10462898.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
gi|395418006|gb|EJF84342.1| single-strand binding protein [Bartonella rattimassiliensis 15908]
Length = 147
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P K + +G V F + T + + +K + K +WH I V N
Sbjct: 2 LNKVILIGHLGANPESKTMSSGAEVVNFRIATFESYTDK-AANKKIDK-TEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A++ L K S VY+EG ++ R + D NG + + E+ + +
Sbjct: 60 HLAKIALQYLNKGSKVYIEGQLQTRKWQDK-NGIERFVTEVILPK 103
>gi|217038311|gb|ACJ76607.1| sjogren syndrome antigen B (predicted) [Oryctolagus cuniculus]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNETYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 88 SVFQPGLRDVAYQYVKKGSRIYVEGKVDYGEYMDKNN 124
>gi|423712746|ref|ZP_17687046.1| single-strand binding protein [Bartonella washoensis Sb944nv]
gi|395410997|gb|EJF77534.1| single-strand binding protein [Bartonella washoensis Sb944nv]
Length = 146
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G + P K + +G V F + T + + K +WH + + N
Sbjct: 2 LNKVMLIGFLGANPESKTMPSGGEVVNFRMATSESYTDKATNQK--VDKTEWHSVVIFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A++ L K S VY+EG ++ R + D NG + I EI + +
Sbjct: 60 HLAKVALQYLNKGSKVYIEGQLQTRKWQDK-NGHDRYITEIVLTK 103
>gi|389584245|dbj|GAB66978.1| single-strand binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 279
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 80 GFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIA 139
G + ++K ++ G+V P KIL G V FS+ T + R + +L WHR+
Sbjct: 72 GEKSLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRVV 129
Query: 140 VHNEILGSYAVKQLVKNSSVYVEGDIEIRV-YNDSINGEVKNIPEICI 186
V+++ + K L K VY++G + R + + + + + I E+ +
Sbjct: 130 VYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQPRQITEVVL 177
>gi|422646639|ref|ZP_16709772.1| single-stranded DNA-binding protein, partial [Pseudomonas syringae
pv. maculicola str. ES4326]
gi|330960186|gb|EGH60446.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 107
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|225630389|ref|YP_002727180.1| single-strand binding protein [Wolbachia sp. wRi]
gi|225592370|gb|ACN95389.1| single-strand binding protein [Wolbachia sp. wRi]
Length = 160
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + +NGK + FS+ T + + G++ + +WH I + +E
Sbjct: 6 INKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKFSGTR--SEKTEWHNIVIFSE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L K S VYVEG + R + D GE
Sbjct: 64 GLVKIVKDFARKGSKVYVEGSLRTRKWTDQNGGE 97
>gi|336233445|ref|YP_004590191.1| single-strand DNA-binding protein [Buchnera aphidicola (Cinara
tujafilina)]
gi|335345386|gb|AEH39932.1| single-strand DNA-binding protein [Buchnera aphidicola (Cinara
tujafilina)]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGINKVILIGNLGQDPDLRYMPNGTAVANINLATSDTWKDKNTG--EMREKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A K L K + VY+EG ++ R + D NG + EI + G
Sbjct: 62 GK-LAEIAGKYLKKGAQVYIEGSLQTRKWQDQ-NGIDRYTTEIIVSITG 108
>gi|261254001|ref|ZP_05946574.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417955179|ref|ZP_12598201.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|260937392|gb|EEX93381.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342813632|gb|EGU48595.1| single-stranded DNA-binding protein [Vibrio orientalis CIP 102891 =
ATCC 33934]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGSDPEIRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|441462337|gb|AGC34626.1| putative single-stranded DNA-binding protein [Pseudomonas phage
H66]
Length = 165
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + +GK VT S+ T + + G + + +WHR+ +
Sbjct: 3 RGVNKVILVGHLGQDPDARSTPSGKAVTSLSLATSESWKDKQTGQQQ--ERTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
L A + L K S VY+EG + R + +G+ E+ + +GN
Sbjct: 61 GR-LAEIAAQYLRKGSQVYIEGSLRTRKWQGQ-DGQDHYSTEVVVDINGN 108
>gi|448244161|ref|YP_007408214.1| single-stranded DNA-binding protein [Serratia marcescens WW4]
gi|134916|sp|P25762.2|SSB_SERMA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|47270|emb|CAA46208.1| single-stranded DNA-binding protein [Serratia marcescens]
gi|445214525|gb|AGE20195.1| single-stranded DNA-binding protein [Serratia marcescens WW4]
gi|453063450|gb|EMF04429.1| single-stranded DNA-binding protein [Serratia marcescens VGH107]
Length = 176
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQK--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D +G+ + EI + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEIVVNVGG 108
>gi|268591423|ref|ZP_06125644.1| single-strand binding protein [Providencia rettgeri DSM 1131]
gi|291313077|gb|EFE53530.1| single-strand binding protein [Providencia rettgeri DSM 1131]
Length = 173
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTG--EMREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG ++ R + D +G+ + E+ + G+
Sbjct: 62 GK-LAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNIGGS 109
>gi|58584471|ref|YP_198044.1| single-stranded DNA-binding protein, ssb [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58418787|gb|AAW70802.1| Single-stranded DNA-binding protein, ssb [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 160
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++NGK + FS+ T + + G + + +WH I + +E
Sbjct: 6 VNKVILVGNLGRNPEIRTMQNGKEMANFSIATSEGWTDKFSGVR--SEKTEWHNIVIFSE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + K S VY+EG ++ R + D NG + E+ ++
Sbjct: 64 GLVKVVKDFVRKGSKVYIEGSLKTRKWTDQ-NGSERYTTEVVLQ 106
>gi|340785670|ref|YP_004751135.1| single-stranded DNA-binding protein [Collimonas fungivorans Ter331]
gi|340550937|gb|AEK60312.1| Single-stranded DNA-binding protein [Collimonas fungivorans Ter331]
Length = 190
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN- 142
V+K II G + P + + NG+ VT +V T + + G K + +WHRI +
Sbjct: 30 VNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNSGEKK--ELTEWHRITFYRK 87
Query: 143 --EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
EI G Y L K S +Y+EG ++ R + D E
Sbjct: 88 LAEIAGQY----LKKGSQIYIEGRLQTRKWQDKDGAE 120
>gi|388454152|ref|NP_001253081.1| single-stranded DNA-binding protein, mitochondrial [Macaca mulatta]
gi|355561063|gb|EHH17749.1| hypothetical protein EGK_14212 [Macaca mulatta]
gi|355748067|gb|EHH52564.1| hypothetical protein EGM_13024 [Macaca fascicularis]
gi|380788827|gb|AFE66289.1| single-stranded DNA-binding protein, mitochondrial precursor
[Macaca mulatta]
gi|383408809|gb|AFH27618.1| single-stranded DNA-binding protein, mitochondrial precursor
[Macaca mulatta]
gi|384943504|gb|AFI35357.1| single-stranded DNA-binding protein, mitochondrial precursor
[Macaca mulatta]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124
>gi|385873092|gb|AFI91612.1| Single-stranded DNA-binding protein [Pectobacterium sp. SCC3193]
Length = 182
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K + G + P + + NG VT ++ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVTLIGFLGQDPEVRYMPNGNAVTGITMATSETWRDKQTGEEK--ERTEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
EI G Y L K S VY+EG ++ R + DS
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLQTRKWQDS 92
>gi|260912875|ref|ZP_05919361.1| single-stranded DNA-binding protein [Pasteurella dagmatis ATCC
43325]
gi|260633253|gb|EEX51418.1| single-stranded DNA-binding protein [Pasteurella dagmatis ATCC
43325]
Length = 171
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTG-GLFDQRIVGSKDLPKPVQWHRIAVH 141
GV+K II G + + P + + NG+ V SV T D+ +++ +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREV---TEWHRIVFY 59
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 60 RRQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQERYTTEI 100
>gi|15804651|ref|NP_290692.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EDL933]
gi|25294292|pir||E86099 ssDNA-binding protein [imported] - Escherichia coli (strain
O157:H7, substrain EDL933)
gi|12519013|gb|AAG59257.1|AE005639_1 ssDNA-binding protein [Escherichia coli O157:H7 str. EDL933]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|344297142|ref|XP_003420258.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Loxodonta africana]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ + + D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGESEVYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 124
>gi|291408145|ref|XP_002720318.1| PREDICTED: single-stranded DNA binding protein 1 [Oryctolagus
cuniculus]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNETYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 88 SVFQPGLRDVAYQYVKKGSRIYVEGKVDYGEYMDKNN 124
>gi|114564862|ref|YP_752376.1| single-strand binding protein [Shewanella frigidimarina NCIMB 400]
gi|1490785|gb|AAB57887.1| single stranded DNA-binding protein [Shewanella sp. SC2A]
gi|114336155|gb|ABI73537.1| single-strand binding protein [Shewanella frigidimarina NCIMB 400]
Length = 242
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF-DQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + P + + NG V F++ T + DQ+ + + +WH I +
Sbjct: 4 RGVNKVILVGNLGKDPEVRYMPNGNAVANFTIATSESWKDQQ----GQMQERTEWHNIVM 59
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
+ EI G Y L K S VY+EG ++ + D G+ + EI
Sbjct: 60 YRRLAEIAGEY----LKKGSKVYLEGKLQTSKWQDQTTGQDRYKTEI 102
>gi|393770486|ref|ZP_10358975.1| single-strand binding protein [Methylobacterium sp. GXF4]
gi|392724073|gb|EIZ81449.1| single-strand binding protein [Methylobacterium sp. GXF4]
Length = 189
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH + ++N+
Sbjct: 5 VNKVILVGNLGRDPEMRRLGSGDPVCNLRLATSESWKDKATGER--KEKTEWHSVVIYND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VY+EG ++ R + D+ +G K E+ ++R
Sbjct: 63 NLARVAEQYLRKGSKVYIEGQLQTRKWTDN-SGVEKYTTEVVLQR 106
>gi|432404821|ref|ZP_19647549.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
gi|430920862|gb|ELC41735.1| plasmid-derived single-stranded DNA-binding protein [Escherichia
coli KTE26]
Length = 170
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G++ P + + NG V V T + + G ++ + +WHR+ + +
Sbjct: 1 MNKVILVGRLGKDPEVRYIPNGGAVANLQVATSETWRDKQTG--EMKEQTEWHRVVLFGK 58
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
L A + L K + VY+EG + R + D NG + + EI ++ G
Sbjct: 59 -LAEVAGEYLRKGAQVYIEGQLRTRSWED--NGITRYVTEILVKTTGT 103
>gi|430761810|ref|YP_007217667.1| Single-stranded DNA-binding protein [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430011434|gb|AGA34186.1| Single-stranded DNA-binding protein [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 158
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P ++ +G T+T + T + + G K + +WHR+ +
Sbjct: 3 RGVNKVILLGNLGADPEKRETPSGLTITNLRIATSEQWTDKQTGEKR--ENTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
LG A L K S VY+EG I+ R +
Sbjct: 61 GR-LGDIAADYLSKGSQVYIEGRIQTRKW 88
>gi|82779525|ref|YP_405874.1| single-stranded DNA-binding protein [Shigella dysenteriae Sd197]
gi|309787555|ref|ZP_07682167.1| single-stranded DNA-binding protein [Shigella dysenteriae 1617]
gi|81243673|gb|ABB64383.1| ssDNA-binding protein [Shigella dysenteriae Sd197]
gi|308925133|gb|EFP70628.1| single-stranded DNA-binding protein [Shigella dysenteriae 1617]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|417626340|ref|ZP_12276623.1| single-stranded DNA-binding protein [Escherichia coli STEC_H.1.8]
gi|345369890|gb|EGX01870.1| single-stranded DNA-binding protein [Escherichia coli STEC_H.1.8]
Length = 188
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|340001611|ref|YP_004732495.1| single-strand DNA-binding protein [Salmonella bongori NCTC 12419]
gi|339514973|emb|CCC32744.1| single-strand DNA-binding protein [Salmonella bongori NCTC 12419]
Length = 176
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTG--EMKEQTEWHRVVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D NG+ + EI + + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-NGQERYTTEINVPQIG 108
>gi|15834295|ref|NP_313068.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
Sakai]
gi|16131885|ref|NP_418483.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|26250861|ref|NP_756901.1| single-stranded DNA-binding protein [Escherichia coli CFT073]
gi|30064648|ref|NP_838819.1| single-stranded DNA-binding protein [Shigella flexneri 2a str.
2457T]
gi|56480523|ref|NP_709860.2| single-stranded DNA-binding protein [Shigella flexneri 2a str. 301]
gi|74314553|ref|YP_312972.1| single-stranded DNA-binding protein [Shigella sonnei Ss046]
gi|82546402|ref|YP_410349.1| single-stranded DNA-binding protein [Shigella boydii Sb227]
gi|110644406|ref|YP_672136.1| single-stranded DNA-binding protein [Escherichia coli 536]
gi|110807924|ref|YP_691444.1| single-stranded DNA-binding protein [Shigella flexneri 5 str. 8401]
gi|157158944|ref|YP_001465559.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|157163528|ref|YP_001460846.1| single-stranded DNA-binding protein [Escherichia coli HS]
gi|162138311|ref|YP_543584.2| single-stranded DNA-binding protein [Escherichia coli UTI89]
gi|162317560|ref|YP_859663.2| single-stranded DNA-binding protein [Escherichia coli APEC O1]
gi|168748095|ref|ZP_02773117.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4113]
gi|168755227|ref|ZP_02780234.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4401]
gi|168760906|ref|ZP_02785913.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4501]
gi|168766317|ref|ZP_02791324.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|168774415|ref|ZP_02799422.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4196]
gi|168780470|ref|ZP_02805477.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4076]
gi|168784673|ref|ZP_02809680.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC869]
gi|168798280|ref|ZP_02823287.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC508]
gi|170021942|ref|YP_001726896.1| single-stranded DNA-binding protein [Escherichia coli ATCC 8739]
gi|170083515|ref|YP_001732835.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. DH10B]
gi|170682295|ref|YP_001746449.1| single-stranded DNA-binding protein [Escherichia coli SMS-3-5]
gi|188492327|ref|ZP_02999597.1| single-stranded DNA-binding protein [Escherichia coli 53638]
gi|191168798|ref|ZP_03030574.1| single-stranded DNA-binding protein [Escherichia coli B7A]
gi|191171973|ref|ZP_03033518.1| single-stranded DNA-binding protein [Escherichia coli F11]
gi|193063066|ref|ZP_03044158.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|193067881|ref|ZP_03048847.1| single-stranded DNA-binding protein [Escherichia coli E110019]
gi|194426835|ref|ZP_03059388.1| single-stranded DNA-binding protein [Escherichia coli B171]
gi|194432319|ref|ZP_03064607.1| single-stranded DNA-binding protein [Shigella dysenteriae 1012]
gi|194437161|ref|ZP_03069259.1| single-stranded DNA-binding protein [Escherichia coli 101-1]
gi|195935843|ref|ZP_03081225.1| single-strand DNA-binding protein [Escherichia coli O157:H7 str.
EC4024]
gi|208806456|ref|ZP_03248793.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208814008|ref|ZP_03255337.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208818434|ref|ZP_03258754.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209397137|ref|YP_002273599.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|209921544|ref|YP_002295628.1| single-stranded DNA-binding protein [Escherichia coli SE11]
gi|215489405|ref|YP_002331836.1| single-stranded DNA-binding protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217324655|ref|ZP_03440739.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|218551380|ref|YP_002385172.1| single-stranded DNA-binding protein [Escherichia fergusonii ATCC
35469]
gi|218556617|ref|YP_002389531.1| single-stranded DNA-binding protein [Escherichia coli IAI1]
gi|218561142|ref|YP_002394055.1| single-stranded DNA-binding protein [Escherichia coli S88]
gi|218692349|ref|YP_002400561.1| single-stranded DNA-binding protein [Escherichia coli ED1a]
gi|218697768|ref|YP_002405435.1| single-stranded DNA-binding protein [Escherichia coli 55989]
gi|218702724|ref|YP_002410353.1| single-stranded DNA-binding protein [Escherichia coli IAI39]
gi|218707681|ref|YP_002415200.1| single-stranded DNA-binding protein [Escherichia coli UMN026]
gi|222158775|ref|YP_002558914.1| Single-stranded DNA-binding protein [Escherichia coli LF82]
gi|227886919|ref|ZP_04004724.1| single-stranded DNA-binding protein [Escherichia coli 83972]
gi|238903169|ref|YP_002928965.1| single-stranded DNA-binding protein [Escherichia coli BW2952]
gi|251787314|ref|YP_003001618.1| ssDNA-binding protein [Escherichia coli BL21(DE3)]
gi|253775312|ref|YP_003038143.1| single-stranded DNA-binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163995|ref|YP_003047103.1| single-stranded DNA-binding protein [Escherichia coli B str.
REL606]
gi|254290745|ref|YP_003056493.1| single-strand DNA-binding protein [Escherichia coli BL21(DE3)]
gi|254796079|ref|YP_003080916.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|260846854|ref|YP_003224632.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
12009]
gi|260858170|ref|YP_003232061.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
11368]
gi|260870819|ref|YP_003237221.1| single-stranded DNA-binding protein [Escherichia coli O111:H- str.
11128]
gi|261225178|ref|ZP_05939459.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255570|ref|ZP_05948103.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
FRIK966]
gi|291285476|ref|YP_003502294.1| Single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
CB9615]
gi|293402698|ref|ZP_06646795.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|293407792|ref|ZP_06651632.1| single-stranded DNA-binding protein [Escherichia coli B354]
gi|293417564|ref|ZP_06660186.1| single-stranded DNA-binding protein [Escherichia coli B185]
gi|293476364|ref|ZP_06664772.1| single-stranded DNA-binding protein [Escherichia coli B088]
gi|297519588|ref|ZP_06937974.1| single-stranded DNA-binding protein [Escherichia coli OP50]
gi|298378227|ref|ZP_06988111.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|300817978|ref|ZP_07098191.1| single-strand binding family protein [Escherichia coli MS 107-1]
gi|300823601|ref|ZP_07103729.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|300899822|ref|ZP_07118037.1| single-strand binding family protein [Escherichia coli MS 198-1]
gi|300906371|ref|ZP_07124069.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|300917291|ref|ZP_07133965.1| single-strand binding family protein [Escherichia coli MS 115-1]
gi|300924323|ref|ZP_07140302.1| single-strand binding family protein [Escherichia coli MS 182-1]
gi|300929802|ref|ZP_07145253.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|300938201|ref|ZP_07152969.1| single-strand binding family protein [Escherichia coli MS 21-1]
gi|300946635|ref|ZP_07160893.1| single-strand binding family protein [Escherichia coli MS 116-1]
gi|300957528|ref|ZP_07169736.1| single-strand binding family protein [Escherichia coli MS 175-1]
gi|300980260|ref|ZP_07174918.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|300993022|ref|ZP_07180145.1| single-strand binding family protein [Escherichia coli MS 45-1]
gi|301019199|ref|ZP_07183397.1| single-strand binding family protein [Escherichia coli MS 196-1]
gi|301021590|ref|ZP_07185588.1| single-strand binding family protein [Escherichia coli MS 69-1]
gi|301047027|ref|ZP_07194134.1| single-strand binding family protein [Escherichia coli MS 185-1]
gi|301302740|ref|ZP_07208869.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|301330566|ref|ZP_07223175.1| single-strand binding family protein [Escherichia coli MS 78-1]
gi|301645049|ref|ZP_07245012.1| single-strand binding family protein [Escherichia coli MS 146-1]
gi|306815821|ref|ZP_07449966.1| single-stranded DNA-binding protein [Escherichia coli NC101]
gi|307312099|ref|ZP_07591736.1| single-strand binding protein [Escherichia coli W]
gi|309795866|ref|ZP_07690280.1| single-strand binding family protein [Escherichia coli MS 145-7]
gi|312965665|ref|ZP_07779894.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|312974145|ref|ZP_07788316.1| single-stranded DNA-binding protein [Escherichia coli 1827-70]
gi|331655881|ref|ZP_08356869.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M718]
gi|331660636|ref|ZP_08361568.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA206]
gi|331665729|ref|ZP_08366623.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA143]
gi|331670923|ref|ZP_08371757.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA271]
gi|331675591|ref|ZP_08376338.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA280]
gi|331680990|ref|ZP_08381627.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H299]
gi|366158968|ref|ZP_09458830.1| single-stranded DNA-binding protein [Escherichia sp. TW09308]
gi|378714992|ref|YP_005279885.1| single-strand binding protein [Escherichia coli KO11FL]
gi|383181374|ref|YP_005459379.1| single-stranded DNA-binding protein [Shigella sonnei 53G]
gi|386278669|ref|ZP_10056363.1| single-stranded DNA-binding protein [Escherichia sp. 4_1_40B]
gi|386597422|ref|YP_006093822.1| single-strand binding protein [Escherichia coli DH1]
gi|386602116|ref|YP_006103622.1| single-stranded DNA-binding protein [Escherichia coli IHE3034]
gi|386606638|ref|YP_006112938.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|386611466|ref|YP_006126952.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|386616891|ref|YP_006136557.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
gi|386621769|ref|YP_006141349.1| ssDNA-binding protein [Escherichia coli NA114]
gi|386627002|ref|YP_006146730.1| single-stranded DNA-binding protein [Escherichia coli O7:K1 str.
CE10]
gi|386632051|ref|YP_006151771.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i2']
gi|386636971|ref|YP_006156690.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i14']
gi|386641728|ref|YP_006108526.1| single-strand binding protein [Escherichia coli ABU 83972]
gi|386698918|ref|YP_006162755.1| single-stranded DNA-binding protein [Escherichia coli KO11FL]
gi|386707300|ref|YP_006171147.1| ssDNA-binding protein [Escherichia coli P12b]
gi|386712008|ref|YP_006175729.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|387509514|ref|YP_006161770.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
RM12579]
gi|387609853|ref|YP_006098709.1| ssDNA-binding protein [Escherichia coli 042]
gi|387614790|ref|YP_006117906.1| ssDNA-binding protein [Escherichia coli ETEC H10407]
gi|387619384|ref|YP_006122406.1| single-stranded DNA-binding protein [Escherichia coli O83:H1 str.
NRG 857C]
gi|387623690|ref|YP_006131318.1| ssDNA-binding protein [Escherichia coli DH1]
gi|387831982|ref|YP_003351919.1| single-strand DNA-binding protein [Escherichia coli SE15]
gi|387885284|ref|YP_006315586.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|388480008|ref|YP_492202.1| Single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. W3110]
gi|404372980|ref|ZP_10978255.1| single-stranded DNA-binding protein [Escherichia sp. 1_1_43]
gi|407467068|ref|YP_006786490.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484210|ref|YP_006781360.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484756|ref|YP_006772302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414578924|ref|ZP_11436082.1| single-stranded DNA-binding protein [Shigella sonnei 3233-85]
gi|415775781|ref|ZP_11487465.1| single-stranded DNA-binding protein [Escherichia coli 3431]
gi|415785052|ref|ZP_11492718.1| single-stranded DNA-binding protein [Escherichia coli EPECa14]
gi|415814127|ref|ZP_11505757.1| single-stranded DNA-binding protein [Escherichia coli LT-68]
gi|415823447|ref|ZP_11511822.1| single-stranded DNA-binding protein [Escherichia coli OK1180]
gi|415831890|ref|ZP_11517441.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|415838147|ref|ZP_11520130.1| single-stranded DNA-binding protein [Escherichia coli RN587/1]
gi|415851818|ref|ZP_11528388.1| single-stranded DNA-binding protein [Shigella sonnei 53G]
gi|415857045|ref|ZP_11531874.1| single-stranded DNA-binding protein [Shigella flexneri 2a str.
2457T]
gi|415864660|ref|ZP_11537684.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|415874349|ref|ZP_11541403.1| single-strand binding protein [Escherichia coli MS 79-10]
gi|416263970|ref|ZP_11640878.1| Single-stranded DNA-binding protein [Shigella dysenteriae CDC
74-1112]
gi|416286025|ref|ZP_11648123.1| Single-stranded DNA-binding protein [Shigella boydii ATCC 9905]
gi|416305171|ref|ZP_11654189.1| Single-stranded DNA-binding protein [Shigella flexneri CDC 796-83]
gi|416308849|ref|ZP_11655302.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|416319458|ref|ZP_11662010.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|416328413|ref|ZP_11668173.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|416338815|ref|ZP_11674816.1| Single-stranded DNA-binding protein [Escherichia coli WV_060327]
gi|416343427|ref|ZP_11677431.1| Single-stranded DNA-binding protein [Escherichia coli EC4100B]
gi|416779344|ref|ZP_11876349.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
G5101]
gi|416790541|ref|ZP_11881238.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
493-89]
gi|416802342|ref|ZP_11886127.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
H 2687]
gi|416813166|ref|ZP_11891065.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
3256-97]
gi|416823678|ref|ZP_11895667.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
USDA 5905]
gi|416833974|ref|ZP_11900663.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
LSU-61]
gi|416900752|ref|ZP_11929921.1| single-stranded DNA-binding protein [Escherichia coli STEC_7v]
gi|417088189|ref|ZP_11954918.1| single strand DNA-binding protein [Escherichia coli cloneA_i1]
gi|417116478|ref|ZP_11967339.1| single-stranded DNA-binding protein [Escherichia coli 1.2741]
gi|417127779|ref|ZP_11975219.1| single-stranded DNA-binding protein [Escherichia coli 97.0246]
gi|417132238|ref|ZP_11977023.1| single-stranded DNA-binding protein [Escherichia coli 5.0588]
gi|417141696|ref|ZP_11984548.1| single-stranded DNA-binding protein [Escherichia coli 97.0259]
gi|417148935|ref|ZP_11989026.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
gi|417157984|ref|ZP_11995608.1| single-stranded DNA-binding protein [Escherichia coli 96.0497]
gi|417167382|ref|ZP_12000268.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|417174509|ref|ZP_12004305.1| single-stranded DNA-binding protein [Escherichia coli 3.2608]
gi|417187224|ref|ZP_12012081.1| single-stranded DNA-binding protein [Escherichia coli 93.0624]
gi|417201005|ref|ZP_12017689.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|417206201|ref|ZP_12019279.1| single-stranded DNA-binding protein [Escherichia coli JB1-95]
gi|417224160|ref|ZP_12027451.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
gi|417230601|ref|ZP_12032098.1| single-stranded DNA-binding protein [Escherichia coli 5.0959]
gi|417238781|ref|ZP_12036205.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|417249251|ref|ZP_12041035.1| single-stranded DNA-binding protein [Escherichia coli 4.0967]
gi|417261078|ref|ZP_12048571.1| single-stranded DNA-binding protein [Escherichia coli 2.3916]
gi|417268605|ref|ZP_12055965.1| single-stranded DNA-binding protein [Escherichia coli 3.3884]
gi|417273850|ref|ZP_12061195.1| single-stranded DNA-binding protein [Escherichia coli 2.4168]
gi|417279725|ref|ZP_12067030.1| single-stranded DNA-binding protein [Escherichia coli 3.2303]
gi|417282354|ref|ZP_12069654.1| single-stranded DNA-binding protein [Escherichia coli 3003]
gi|417287905|ref|ZP_12075191.1| single-stranded DNA-binding protein [Escherichia coli TW07793]
gi|417293464|ref|ZP_12080743.1| single-stranded DNA-binding protein [Escherichia coli B41]
gi|417295729|ref|ZP_12082976.1| single-stranded DNA-binding protein [Escherichia coli 900105 (10e)]
gi|417310672|ref|ZP_12097482.1| Single-stranded DNA-binding protein [Escherichia coli PCN033]
gi|417583732|ref|ZP_12234526.1| single-stranded DNA-binding protein [Escherichia coli STEC_B2F1]
gi|417584469|ref|ZP_12235253.1| single-stranded DNA-binding protein [Escherichia coli STEC_C165-02]
gi|417594596|ref|ZP_12245281.1| single-stranded DNA-binding protein [Escherichia coli 2534-86]
gi|417599506|ref|ZP_12250124.1| single-stranded DNA-binding protein [Escherichia coli 3030-1]
gi|417605029|ref|ZP_12255586.1| single-stranded DNA-binding protein [Escherichia coli STEC_94C]
gi|417610843|ref|ZP_12261328.1| single-stranded DNA-binding protein [Escherichia coli STEC_DG131-3]
gi|417620757|ref|ZP_12271153.1| single-stranded DNA-binding protein [Escherichia coli G58-1]
gi|417637022|ref|ZP_12287223.1| single-stranded DNA-binding protein [Escherichia coli STEC_S1191]
gi|417642096|ref|ZP_12292218.1| single-stranded DNA-binding protein [Escherichia coli TX1999]
gi|417664720|ref|ZP_12314299.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|417669688|ref|ZP_12319217.1| single-stranded DNA-binding protein [Escherichia coli STEC_O31]
gi|417675396|ref|ZP_12324819.1| single-stranded DNA-binding protein [Shigella dysenteriae 155-74]
gi|417684825|ref|ZP_12334158.1| single-stranded DNA-binding protein [Shigella boydii 3594-74]
gi|417692552|ref|ZP_12341746.1| single-stranded DNA-binding protein [Shigella boydii 5216-82]
gi|417704162|ref|ZP_12353265.1| single-stranded DNA-binding protein [Shigella flexneri K-218]
gi|417714407|ref|ZP_12363363.1| single-stranded DNA-binding protein [Shigella flexneri K-272]
gi|417719238|ref|ZP_12368125.1| single-stranded DNA-binding protein [Shigella flexneri K-227]
gi|417725048|ref|ZP_12373840.1| single-stranded DNA-binding protein [Shigella flexneri K-304]
gi|417730322|ref|ZP_12379011.1| single-stranded DNA-binding protein [Shigella flexneri K-671]
gi|417735501|ref|ZP_12384143.1| single-stranded DNA-binding protein [Shigella flexneri 2747-71]
gi|417740182|ref|ZP_12388753.1| single-stranded DNA-binding protein [Shigella flexneri 4343-70]
gi|417745270|ref|ZP_12393790.1| ssDNA-binding protein [Shigella flexneri 2930-71]
gi|417758573|ref|ZP_12406628.1| ssDNA-binding protein [Escherichia coli DEC2B]
gi|417807760|ref|ZP_12454686.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|417830671|ref|ZP_12477206.1| ssDNA-binding protein [Shigella flexneri J1713]
gi|417835501|ref|ZP_12481940.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|417867560|ref|ZP_12512596.1| hypothetical protein C22711_4487 [Escherichia coli O104:H4 str.
C227-11]
gi|417944837|ref|ZP_12588076.1| single-stranded DNA-binding protein [Escherichia coli XH140A]
gi|418040043|ref|ZP_12678295.1| single-stranded DNA-binding protein [Escherichia coli W26]
gi|418258896|ref|ZP_12882022.1| ssDNA-binding protein [Shigella flexneri 6603-63]
gi|418270672|ref|ZP_12888433.1| ssDNA-binding protein [Shigella sonnei str. Moseley]
gi|418305690|ref|ZP_12917484.1| single-stranded DNA-binding protein [Escherichia coli UMNF18]
gi|418943019|ref|ZP_13496249.1| single-stranded DNA-binding protein [Escherichia coli O157:H43 str.
T22]
gi|418960057|ref|ZP_13511952.1| single-stranded DNA-binding protein [Escherichia coli J53]
gi|418999907|ref|ZP_13547477.1| ssDNA-binding protein [Escherichia coli DEC1A]
gi|419004971|ref|ZP_13552473.1| ssDNA-binding protein [Escherichia coli DEC1B]
gi|419010624|ref|ZP_13558025.1| ssDNA-binding protein [Escherichia coli DEC1C]
gi|419011228|ref|ZP_13558598.1| single-stranded DNA-binding protein [Escherichia coli DEC1D]
gi|419021276|ref|ZP_13568566.1| ssDNA-binding protein [Escherichia coli DEC1E]
gi|419026745|ref|ZP_13573951.1| single-stranded DNA-binding protein [Escherichia coli DEC2A]
gi|419031889|ref|ZP_13579021.1| ssDNA-binding protein [Escherichia coli DEC2C]
gi|419037493|ref|ZP_13584559.1| ssDNA-binding protein [Escherichia coli DEC2D]
gi|419042580|ref|ZP_13589589.1| ssDNA-binding protein [Escherichia coli DEC2E]
gi|419048126|ref|ZP_13595052.1| ssDNA-binding protein [Escherichia coli DEC3A]
gi|419053925|ref|ZP_13600788.1| ssDNA-binding protein [Escherichia coli DEC3B]
gi|419059992|ref|ZP_13606786.1| ssDNA-binding protein [Escherichia coli DEC3C]
gi|419065353|ref|ZP_13612057.1| ssDNA-binding protein [Escherichia coli DEC3D]
gi|419072352|ref|ZP_13617945.1| ssDNA-binding protein [Escherichia coli DEC3E]
gi|419078333|ref|ZP_13623824.1| ssDNA-binding protein [Escherichia coli DEC3F]
gi|419083394|ref|ZP_13628832.1| ssDNA-binding protein [Escherichia coli DEC4A]
gi|419089401|ref|ZP_13634745.1| ssDNA-binding protein [Escherichia coli DEC4B]
gi|419095788|ref|ZP_13641057.1| ssDNA-binding protein [Escherichia coli DEC4C]
gi|419101189|ref|ZP_13646370.1| ssDNA-binding protein [Escherichia coli DEC4D]
gi|419106677|ref|ZP_13651793.1| ssDNA-binding protein [Escherichia coli DEC4E]
gi|419112125|ref|ZP_13657170.1| ssDNA-binding protein [Escherichia coli DEC4F]
gi|419117646|ref|ZP_13662648.1| ssDNA-binding protein [Escherichia coli DEC5A]
gi|419123426|ref|ZP_13668361.1| ssDNA-binding protein [Escherichia coli DEC5B]
gi|419128894|ref|ZP_13673757.1| ssDNA-binding protein [Escherichia coli DEC5C]
gi|419134269|ref|ZP_13679087.1| ssDNA-binding protein [Escherichia coli DEC5D]
gi|419139495|ref|ZP_13684279.1| single-stranded DNA-binding protein [Escherichia coli DEC5E]
gi|419145183|ref|ZP_13689904.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
gi|419151031|ref|ZP_13695673.1| ssDNA-binding protein [Escherichia coli DEC6B]
gi|419156593|ref|ZP_13701141.1| single-stranded DNA-binding protein [Escherichia coli DEC6C]
gi|419161946|ref|ZP_13706432.1| single-stranded DNA-binding protein [Escherichia coli DEC6D]
gi|419167034|ref|ZP_13711476.1| ssDNA-binding protein [Escherichia coli DEC6E]
gi|419173050|ref|ZP_13716916.1| single-stranded DNA-binding protein [Escherichia coli DEC7A]
gi|419177800|ref|ZP_13721600.1| ssDNA-binding protein [Escherichia coli DEC7B]
gi|419183625|ref|ZP_13727205.1| ssDNA-binding protein [Escherichia coli DEC7C]
gi|419189224|ref|ZP_13732721.1| ssDNA-binding protein [Escherichia coli DEC7D]
gi|419194356|ref|ZP_13737790.1| single-stranded DNA-binding protein [Escherichia coli DEC7E]
gi|419199888|ref|ZP_13743169.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|419206274|ref|ZP_13749421.1| ssDNA-binding protein [Escherichia coli DEC8B]
gi|419212654|ref|ZP_13755709.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|419218462|ref|ZP_13761446.1| ssDNA-binding protein [Escherichia coli DEC8D]
gi|419224214|ref|ZP_13767119.1| ssDNA-binding protein [Escherichia coli DEC8E]
gi|419229776|ref|ZP_13772603.1| ssDNA-binding protein [Escherichia coli DEC9A]
gi|419235311|ref|ZP_13778069.1| ssDNA-binding protein [Escherichia coli DEC9B]
gi|419240596|ref|ZP_13783294.1| ssDNA-binding protein [Escherichia coli DEC9C]
gi|419246289|ref|ZP_13788913.1| ssDNA-binding protein [Escherichia coli DEC9D]
gi|419252018|ref|ZP_13794579.1| ssDNA-binding protein [Escherichia coli DEC9E]
gi|419257793|ref|ZP_13800285.1| ssDNA-binding protein [Escherichia coli DEC10A]
gi|419263971|ref|ZP_13806372.1| ssDNA-binding protein [Escherichia coli DEC10B]
gi|419270204|ref|ZP_13812543.1| ssDNA-binding protein [Escherichia coli DEC10C]
gi|419275449|ref|ZP_13817731.1| ssDNA-binding protein [Escherichia coli DEC10D]
gi|419280857|ref|ZP_13823090.1| ssDNA-binding protein [Escherichia coli DEC10E]
gi|419287047|ref|ZP_13829201.1| ssDNA-binding protein [Escherichia coli DEC10F]
gi|419292296|ref|ZP_13834374.1| ssDNA-binding protein [Escherichia coli DEC11A]
gi|419297647|ref|ZP_13839676.1| ssDNA-binding protein [Escherichia coli DEC11B]
gi|419303111|ref|ZP_13845097.1| single-stranded DNA-binding protein [Escherichia coli DEC11C]
gi|419309156|ref|ZP_13851040.1| single-stranded DNA-binding protein [Escherichia coli DEC11D]
gi|419314115|ref|ZP_13855967.1| single-stranded DNA-binding protein [Escherichia coli DEC11E]
gi|419319643|ref|ZP_13861433.1| single-stranded DNA-binding protein [Escherichia coli DEC12A]
gi|419325909|ref|ZP_13867587.1| ssDNA-binding protein [Escherichia coli DEC12B]
gi|419331789|ref|ZP_13873375.1| single-stranded DNA-binding protein [Escherichia coli DEC12C]
gi|419337342|ref|ZP_13878845.1| ssDNA-binding protein [Escherichia coli DEC12D]
gi|419342695|ref|ZP_13884141.1| ssDNA-binding protein [Escherichia coli DEC12E]
gi|419347912|ref|ZP_13889272.1| ssDNA-binding protein [Escherichia coli DEC13A]
gi|419352364|ref|ZP_13893685.1| ssDNA-binding protein [Escherichia coli DEC13B]
gi|419357850|ref|ZP_13899089.1| ssDNA-binding protein [Escherichia coli DEC13C]
gi|419362808|ref|ZP_13904008.1| ssDNA-binding protein [Escherichia coli DEC13D]
gi|419367953|ref|ZP_13909092.1| ssDNA-binding protein [Escherichia coli DEC13E]
gi|419372715|ref|ZP_13913814.1| single-stranded DNA-binding protein [Escherichia coli DEC14A]
gi|419378325|ref|ZP_13919333.1| ssDNA-binding protein [Escherichia coli DEC14B]
gi|419383663|ref|ZP_13924594.1| ssDNA-binding protein [Escherichia coli DEC14C]
gi|419394396|ref|ZP_13935187.1| ssDNA-binding protein [Escherichia coli DEC15A]
gi|419399529|ref|ZP_13940283.1| ssDNA-binding protein [Escherichia coli DEC15B]
gi|419404772|ref|ZP_13945483.1| ssDNA-binding protein [Escherichia coli DEC15C]
gi|419409932|ref|ZP_13950611.1| ssDNA-binding protein [Escherichia coli DEC15D]
gi|419415498|ref|ZP_13956124.1| ssDNA-binding protein [Escherichia coli DEC15E]
gi|419702935|ref|ZP_14230517.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|419805720|ref|ZP_14330849.1| single-stranded DNA-binding protein [Escherichia coli AI27]
gi|419812612|ref|ZP_14337476.1| single-stranded DNA-binding protein [Escherichia coli O32:H37 str.
P4]
gi|419863056|ref|ZP_14385617.1| single-stranded DNA-binding protein [Escherichia coli O103:H25 str.
CVM9340]
gi|419872891|ref|ZP_14394906.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
CVM9450]
gi|419874386|ref|ZP_14396322.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9534]
gi|419884770|ref|ZP_14405647.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9545]
gi|419889331|ref|ZP_14409749.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|419893886|ref|ZP_14413837.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|419902444|ref|ZP_14421659.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9942]
gi|419909770|ref|ZP_14428308.1| single-strand binding protein [Escherichia coli O26:H11 str.
CVM10026]
gi|419913157|ref|ZP_14431600.1| single-stranded DNA-binding protein [Escherichia coli KD1]
gi|419919478|ref|ZP_14437630.1| single-stranded DNA-binding protein [Escherichia coli KD2]
gi|419925933|ref|ZP_14443751.1| single-stranded DNA-binding protein [Escherichia coli 541-15]
gi|419929972|ref|ZP_14447636.1| single-stranded DNA-binding protein [Escherichia coli 541-1]
gi|419935796|ref|ZP_14452864.1| single-stranded DNA-binding protein [Escherichia coli 576-1]
gi|419938230|ref|ZP_14455070.1| single-stranded DNA-binding protein [Escherichia coli 75]
gi|419943111|ref|ZP_14459681.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|419951002|ref|ZP_14467202.1| single-stranded DNA-binding protein [Escherichia coli CUMT8]
gi|420089141|ref|ZP_14600978.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9602]
gi|420094970|ref|ZP_14606516.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
gi|420099524|ref|ZP_14610748.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9455]
gi|420107638|ref|ZP_14617960.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|420112414|ref|ZP_14622213.1| hypothetical protein ECO10021_28380 [Escherichia coli O26:H11 str.
CVM10021]
gi|420122264|ref|ZP_14631252.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10030]
gi|420126343|ref|ZP_14635079.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10224]
gi|420130451|ref|ZP_14638943.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|420272680|ref|ZP_14775022.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|420278235|ref|ZP_14780508.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|420283476|ref|ZP_14785701.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|420284260|ref|ZP_14786480.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|420295254|ref|ZP_14797358.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|420301169|ref|ZP_14803207.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|420301840|ref|ZP_14803875.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|420312473|ref|ZP_14814394.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|420318383|ref|ZP_14820245.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|420322326|ref|ZP_14824148.1| single-stranded DNA-binding protein [Shigella flexneri 2850-71]
gi|420327507|ref|ZP_14829251.1| single-stranded DNA-binding protein [Shigella flexneri CCH060]
gi|420338056|ref|ZP_14839617.1| single-stranded DNA-binding protein [Shigella flexneri K-315]
gi|420343723|ref|ZP_14845187.1| single-stranded DNA-binding protein [Shigella flexneri K-404]
gi|420350239|ref|ZP_14851596.1| single-stranded DNA-binding protein [Shigella boydii 965-58]
gi|420355708|ref|ZP_14856764.1| single-stranded DNA-binding protein [Shigella boydii 4444-74]
gi|420361466|ref|ZP_14862403.1| single-stranded DNA-binding protein [Shigella sonnei 3226-85]
gi|420366117|ref|ZP_14866970.1| ssDNA-binding protein [Shigella sonnei 4822-66]
gi|420377854|ref|ZP_14877406.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|420383406|ref|ZP_14882820.1| single-stranded DNA-binding protein [Shigella dysenteriae 225-75]
gi|420388448|ref|ZP_14887774.1| single-stranded DNA-binding protein [Escherichia coli EPECa12]
gi|420394220|ref|ZP_14893457.1| ssDNA-binding protein [Escherichia coli EPEC C342-62]
gi|421684525|ref|ZP_16124310.1| ssDNA-binding protein [Shigella flexneri 1485-80]
gi|421777208|ref|ZP_16213806.1| single-stranded DNA-binding protein [Escherichia coli AD30]
gi|421815170|ref|ZP_16250862.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|421820917|ref|ZP_16256394.1| single-stranded DNA-binding protein [Escherichia coli 10.0821]
gi|421826975|ref|ZP_16262321.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|421827927|ref|ZP_16263259.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|422331505|ref|ZP_16412521.1| single-stranded DNA-binding protein [Escherichia coli 4_1_47FAA]
gi|422354920|ref|ZP_16435645.1| single-strand binding family protein [Escherichia coli MS 117-3]
gi|422358315|ref|ZP_16438975.1| single-strand binding family protein [Escherichia coli MS 110-3]
gi|422365744|ref|ZP_16446234.1| single-strand binding family protein [Escherichia coli MS 153-1]
gi|422370742|ref|ZP_16451131.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|422373803|ref|ZP_16454101.1| single-strand binding family protein [Escherichia coli MS 60-1]
gi|422381010|ref|ZP_16461181.1| single-strand binding family protein [Escherichia coli MS 57-2]
gi|422751048|ref|ZP_16804958.1| single-strand binding protein [Escherichia coli H252]
gi|422757163|ref|ZP_16810984.1| single-strand binding protein [Escherichia coli H263]
gi|422761378|ref|ZP_16815136.1| single-strand binding protein [Escherichia coli E1167]
gi|422767933|ref|ZP_16821658.1| single-strand binding protein [Escherichia coli E1520]
gi|422772617|ref|ZP_16826304.1| single-strand binding protein [Escherichia coli E482]
gi|422776262|ref|ZP_16829916.1| single-strand binding protein [Escherichia coli H120]
gi|422783584|ref|ZP_16836368.1| single-strand binding protein [Escherichia coli TW10509]
gi|422787908|ref|ZP_16840645.1| single-strand binding protein [Escherichia coli H489]
gi|422793640|ref|ZP_16846335.1| single-strand binding protein [Escherichia coli TA007]
gi|422801779|ref|ZP_16850274.1| single-strand binding protein [Escherichia coli M863]
gi|422807117|ref|ZP_16855548.1| single-strand binding protein [Escherichia fergusonii B253]
gi|422815595|ref|ZP_16863810.1| single-stranded DNA-binding protein [Escherichia coli M919]
gi|422829134|ref|ZP_16877302.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|422832667|ref|ZP_16880736.1| single-stranded DNA-binding protein [Escherichia coli E101]
gi|422840485|ref|ZP_16888456.1| single-stranded DNA-binding protein [Escherichia coli H397]
gi|422958032|ref|ZP_16970246.1| single-stranded DNA-binding protein [Escherichia coli H494]
gi|422972558|ref|ZP_16975385.1| single-stranded DNA-binding protein [Escherichia coli TA124]
gi|422990325|ref|ZP_16981097.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C227-11]
gi|422997221|ref|ZP_16987983.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C236-11]
gi|423002317|ref|ZP_16993068.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
09-7901]
gi|423005973|ref|ZP_16996718.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
04-8351]
gi|423012536|ref|ZP_17003266.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-3677]
gi|423021767|ref|ZP_17012471.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4404]
gi|423026921|ref|ZP_17017615.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4522]
gi|423032750|ref|ZP_17023436.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4623]
gi|423035626|ref|ZP_17026302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423040745|ref|ZP_17031413.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047431|ref|ZP_17038089.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055969|ref|ZP_17044775.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057974|ref|ZP_17046772.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423703610|ref|ZP_17678042.1| single-stranded DNA-binding protein [Escherichia coli H730]
gi|423708375|ref|ZP_17682755.1| single-stranded DNA-binding protein [Escherichia coli B799]
gi|423728363|ref|ZP_17702100.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|424080417|ref|ZP_17817348.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|424086826|ref|ZP_17823286.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|424093243|ref|ZP_17829142.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|424099937|ref|ZP_17835160.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|424106135|ref|ZP_17840834.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|424112745|ref|ZP_17846949.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|424118697|ref|ZP_17852506.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|424131060|ref|ZP_17863938.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|424137380|ref|ZP_17869788.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|424143917|ref|ZP_17875743.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|424150280|ref|ZP_17881633.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|424168434|ref|ZP_17887071.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|424259349|ref|ZP_17892611.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|424336367|ref|ZP_17898548.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|424452625|ref|ZP_17904238.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|424458786|ref|ZP_17909856.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|424465341|ref|ZP_17915624.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|424471563|ref|ZP_17921335.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|424478033|ref|ZP_17927326.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|424483835|ref|ZP_17932790.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|424490031|ref|ZP_17938539.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|424496751|ref|ZP_17944230.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|424503350|ref|ZP_17950209.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|424509625|ref|ZP_17955964.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|424517040|ref|ZP_17961591.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|424523158|ref|ZP_17967235.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|424529007|ref|ZP_17972697.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|424535149|ref|ZP_17978476.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|424541255|ref|ZP_17984175.1| single-stranded DNA-binding protein [Escherichia coli EC4013]
gi|424547406|ref|ZP_17989706.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|424553604|ref|ZP_17995404.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|424559802|ref|ZP_18001170.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|424566124|ref|ZP_18007102.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|424572254|ref|ZP_18012761.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|424578412|ref|ZP_18018419.1| single-stranded DNA-binding protein [Escherichia coli EC1845]
gi|424584233|ref|ZP_18023855.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|424751364|ref|ZP_18179394.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424758040|ref|ZP_18185762.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424773304|ref|ZP_18200367.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|424818629|ref|ZP_18243780.1| Ssb [Escherichia fergusonii ECD227]
gi|424840295|ref|ZP_18264932.1| single-stranded DNA-binding protein [Shigella flexneri 5a str.
M90T]
gi|425100887|ref|ZP_18503602.1| single-stranded DNA-binding protein [Escherichia coli 3.4870]
gi|425106983|ref|ZP_18509272.1| single-stranded DNA-binding protein [Escherichia coli 5.2239]
gi|425112965|ref|ZP_18514864.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|425117692|ref|ZP_18519459.1| single-stranded DNA-binding protein [Escherichia coli 8.0566]
gi|425122408|ref|ZP_18524072.1| single-stranded DNA-binding protein [Escherichia coli 8.0569]
gi|425128936|ref|ZP_18530082.1| single-stranded DNA-binding protein [Escherichia coli 8.0586]
gi|425134677|ref|ZP_18535505.1| single-stranded DNA-binding protein [Escherichia coli 8.2524]
gi|425141271|ref|ZP_18541628.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|425146950|ref|ZP_18546919.1| single-stranded DNA-binding protein [Escherichia coli 10.0869]
gi|425153061|ref|ZP_18552651.1| single-stranded DNA-binding protein [Escherichia coli 88.0221]
gi|425158962|ref|ZP_18558201.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|425159420|ref|ZP_18558630.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|425171015|ref|ZP_18569467.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|425177054|ref|ZP_18575151.1| single-stranded DNA-binding protein [Escherichia coli FDA504]
gi|425189417|ref|ZP_18586666.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|425196163|ref|ZP_18592908.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|425202642|ref|ZP_18598825.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|425203009|ref|ZP_18599171.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|425214798|ref|ZP_18610179.1| single-stranded DNA-binding protein [Escherichia coli PA4]
gi|425220880|ref|ZP_18615821.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|425227535|ref|ZP_18621978.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|425233684|ref|ZP_18627701.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|425239607|ref|ZP_18633305.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|425245862|ref|ZP_18639145.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|425251997|ref|ZP_18644919.1| single-stranded DNA-binding protein [Escherichia coli 5905]
gi|425257853|ref|ZP_18650324.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|425264107|ref|ZP_18656074.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|425270118|ref|ZP_18661720.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|425275413|ref|ZP_18666785.1| single-stranded DNA-binding protein [Escherichia coli TW15901]
gi|425280528|ref|ZP_18671736.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
gi|425285967|ref|ZP_18676973.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|425291284|ref|ZP_18682086.1| single-stranded DNA-binding protein [Escherichia coli 3006]
gi|425297582|ref|ZP_18687675.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|425302991|ref|ZP_18692864.1| single-stranded DNA-binding protein [Escherichia coli 07798]
gi|425307898|ref|ZP_18697553.1| single-stranded DNA-binding protein [Escherichia coli N1]
gi|425314269|ref|ZP_18703412.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|425320250|ref|ZP_18709004.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|425326397|ref|ZP_18714697.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|425332704|ref|ZP_18720490.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|425338884|ref|ZP_18726196.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|425345175|ref|ZP_18732039.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|425351013|ref|ZP_18737448.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|425357282|ref|ZP_18743320.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|425363237|ref|ZP_18748860.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|425369501|ref|ZP_18754551.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|425375806|ref|ZP_18760420.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|425382470|ref|ZP_18766436.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|425388692|ref|ZP_18772228.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|425395421|ref|ZP_18778503.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|425401476|ref|ZP_18784158.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|425407573|ref|ZP_18789770.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|425413910|ref|ZP_18795649.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|425420232|ref|ZP_18801481.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|425425106|ref|ZP_18806244.1| single-stranded DNA-binding protein [Escherichia coli 0.1288]
gi|425431526|ref|ZP_18812112.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|427807279|ref|ZP_18974346.1| ssDNA-binding protein [Escherichia coli chi7122]
gi|427811861|ref|ZP_18978926.1| ssDNA-binding protein [Escherichia coli]
gi|428949947|ref|ZP_19022194.1| single-stranded DNA-binding protein [Escherichia coli 88.1467]
gi|428956002|ref|ZP_19027770.1| single-stranded DNA-binding protein [Escherichia coli 88.1042]
gi|428962057|ref|ZP_19033312.1| single-stranded DNA-binding protein [Escherichia coli 89.0511]
gi|428968646|ref|ZP_19039325.1| single-stranded DNA-binding protein [Escherichia coli 90.0091]
gi|428974411|ref|ZP_19044698.1| single-stranded DNA-binding protein [Escherichia coli 90.0039]
gi|428980860|ref|ZP_19050642.1| single-stranded DNA-binding protein [Escherichia coli 90.2281]
gi|428986579|ref|ZP_19055945.1| single-stranded DNA-binding protein [Escherichia coli 93.0055]
gi|428992716|ref|ZP_19061682.1| single-stranded DNA-binding protein [Escherichia coli 93.0056]
gi|428998609|ref|ZP_19067179.1| single-stranded DNA-binding protein [Escherichia coli 94.0618]
gi|429005082|ref|ZP_19073116.1| single-stranded DNA-binding protein [Escherichia coli 95.0183]
gi|429011095|ref|ZP_19078460.1| single-stranded DNA-binding protein [Escherichia coli 95.1288]
gi|429017507|ref|ZP_19084361.1| single-stranded DNA-binding protein [Escherichia coli 95.0943]
gi|429023356|ref|ZP_19089848.1| single-stranded DNA-binding protein [Escherichia coli 96.0428]
gi|429029429|ref|ZP_19095377.1| single-stranded DNA-binding protein [Escherichia coli 96.0427]
gi|429035590|ref|ZP_19101086.1| single-stranded DNA-binding protein [Escherichia coli 96.0939]
gi|429041699|ref|ZP_19106761.1| single-stranded DNA-binding protein [Escherichia coli 96.0932]
gi|429047579|ref|ZP_19112269.1| single-stranded DNA-binding protein [Escherichia coli 96.0107]
gi|429052898|ref|ZP_19117449.1| single-stranded DNA-binding protein [Escherichia coli 97.0003]
gi|429058451|ref|ZP_19122670.1| single-stranded DNA-binding protein [Escherichia coli 97.1742]
gi|429063947|ref|ZP_19127884.1| single-stranded DNA-binding protein [Escherichia coli 97.0007]
gi|429070206|ref|ZP_19133615.1| single-stranded DNA-binding protein [Escherichia coli 99.0672]
gi|429075970|ref|ZP_19139205.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|429081151|ref|ZP_19144271.1| single-stranded DNA-binding protein [Escherichia coli 99.0713]
gi|429721808|ref|ZP_19256719.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429773886|ref|ZP_19305895.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02030]
gi|429779071|ref|ZP_19311032.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782906|ref|ZP_19314826.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02092]
gi|429788299|ref|ZP_19320181.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02093]
gi|429794737|ref|ZP_19326573.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02281]
gi|429800697|ref|ZP_19332481.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02318]
gi|429804310|ref|ZP_19336062.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02913]
gi|429809135|ref|ZP_19340845.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03439]
gi|429814899|ref|ZP_19346564.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-04080]
gi|429820103|ref|ZP_19351727.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03943]
gi|429829340|ref|ZP_19360311.1| single-stranded DNA-binding protein [Escherichia coli 96.0109]
gi|429835813|ref|ZP_19366026.1| single-stranded DNA-binding protein [Escherichia coli 97.0010]
gi|429906177|ref|ZP_19372149.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910311|ref|ZP_19376269.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429916209|ref|ZP_19382152.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921257|ref|ZP_19387181.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429927062|ref|ZP_19392971.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930995|ref|ZP_19396892.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429937536|ref|ZP_19403420.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429943214|ref|ZP_19409085.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945895|ref|ZP_19411753.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429953460|ref|ZP_19419302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429956803|ref|ZP_19422633.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432351248|ref|ZP_19594565.1| single-stranded DNA-binding protein [Escherichia coli KTE2]
gi|432360549|ref|ZP_19603756.1| single-stranded DNA-binding protein [Escherichia coli KTE4]
gi|432365349|ref|ZP_19608498.1| single-stranded DNA-binding protein [Escherichia coli KTE5]
gi|432367634|ref|ZP_19610743.1| single-stranded DNA-binding protein [Escherichia coli KTE10]
gi|432374644|ref|ZP_19617670.1| single-stranded DNA-binding protein [Escherichia coli KTE11]
gi|432379302|ref|ZP_19622279.1| single-stranded DNA-binding protein [Escherichia coli KTE12]
gi|432383983|ref|ZP_19626903.1| single-stranded DNA-binding protein [Escherichia coli KTE15]
gi|432384998|ref|ZP_19627903.1| single-stranded DNA-binding protein [Escherichia coli KTE16]
gi|432394806|ref|ZP_19637616.1| single-stranded DNA-binding protein [Escherichia coli KTE21]
gi|432395480|ref|ZP_19638276.1| single-stranded DNA-binding protein [Escherichia coli KTE25]
gi|432404456|ref|ZP_19647195.1| single-stranded DNA-binding protein [Escherichia coli KTE26]
gi|432409166|ref|ZP_19651864.1| single-stranded DNA-binding protein [Escherichia coli KTE28]
gi|432409589|ref|ZP_19652279.1| single-stranded DNA-binding protein [Escherichia coli KTE39]
gi|432414551|ref|ZP_19657194.1| single-stranded DNA-binding protein [Escherichia coli KTE44]
gi|432419696|ref|ZP_19662259.1| single-stranded DNA-binding protein [Escherichia coli KTE178]
gi|432428724|ref|ZP_19671199.1| single-stranded DNA-binding protein [Escherichia coli KTE181]
gi|432429836|ref|ZP_19672288.1| single-stranded DNA-binding protein [Escherichia coli KTE187]
gi|432439057|ref|ZP_19681429.1| single-stranded DNA-binding protein [Escherichia coli KTE188]
gi|432443689|ref|ZP_19686010.1| single-stranded DNA-binding protein [Escherichia coli KTE189]
gi|432448764|ref|ZP_19691058.1| single-stranded DNA-binding protein [Escherichia coli KTE191]
gi|432452334|ref|ZP_19694585.1| single-stranded DNA-binding protein [Escherichia coli KTE193]
gi|432454326|ref|ZP_19696543.1| single-stranded DNA-binding protein [Escherichia coli KTE201]
gi|432463467|ref|ZP_19705594.1| single-stranded DNA-binding protein [Escherichia coli KTE204]
gi|432468477|ref|ZP_19710548.1| single-stranded DNA-binding protein [Escherichia coli KTE205]
gi|432473440|ref|ZP_19715473.1| single-stranded DNA-binding protein [Escherichia coli KTE206]
gi|432478422|ref|ZP_19720403.1| single-stranded DNA-binding protein [Escherichia coli KTE208]
gi|432479012|ref|ZP_19720979.1| single-stranded DNA-binding protein [Escherichia coli KTE210]
gi|432487853|ref|ZP_19729755.1| single-stranded DNA-binding protein [Escherichia coli KTE212]
gi|432491891|ref|ZP_19733746.1| single-stranded DNA-binding protein [Escherichia coli KTE213]
gi|432493409|ref|ZP_19735234.1| single-stranded DNA-binding protein [Escherichia coli KTE214]
gi|432502652|ref|ZP_19744397.1| single-stranded DNA-binding protein [Escherichia coli KTE216]
gi|432506988|ref|ZP_19748702.1| single-stranded DNA-binding protein [Escherichia coli KTE220]
gi|432516474|ref|ZP_19753685.1| single-stranded DNA-binding protein [Escherichia coli KTE224]
gi|432520272|ref|ZP_19757447.1| single-stranded DNA-binding protein [Escherichia coli KTE228]
gi|432526572|ref|ZP_19763680.1| single-stranded DNA-binding protein [Escherichia coli KTE230]
gi|432528963|ref|ZP_19766028.1| single-stranded DNA-binding protein [Escherichia coli KTE233]
gi|432531854|ref|ZP_19768870.1| single-stranded DNA-binding protein [Escherichia coli KTE234]
gi|432540440|ref|ZP_19777328.1| single-stranded DNA-binding protein [Escherichia coli KTE235]
gi|432545922|ref|ZP_19782739.1| single-stranded DNA-binding protein [Escherichia coli KTE236]
gi|432551403|ref|ZP_19788146.1| single-stranded DNA-binding protein [Escherichia coli KTE237]
gi|432551663|ref|ZP_19788398.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
gi|432556607|ref|ZP_19793309.1| single-stranded DNA-binding protein [Escherichia coli KTE49]
gi|432561510|ref|ZP_19798148.1| single-stranded DNA-binding protein [Escherichia coli KTE51]
gi|432566509|ref|ZP_19803045.1| single-stranded DNA-binding protein [Escherichia coli KTE53]
gi|432571394|ref|ZP_19807890.1| single-stranded DNA-binding protein [Escherichia coli KTE55]
gi|432578331|ref|ZP_19814773.1| single-stranded DNA-binding protein [Escherichia coli KTE56]
gi|432580868|ref|ZP_19817289.1| single-stranded DNA-binding protein [Escherichia coli KTE57]
gi|432585860|ref|ZP_19822238.1| single-stranded DNA-binding protein [Escherichia coli KTE58]
gi|432590674|ref|ZP_19827011.1| single-stranded DNA-binding protein [Escherichia coli KTE60]
gi|432595377|ref|ZP_19831675.1| single-stranded DNA-binding protein [Escherichia coli KTE62]
gi|432604886|ref|ZP_19841109.1| single-stranded DNA-binding protein [Escherichia coli KTE66]
gi|432605534|ref|ZP_19841739.1| single-stranded DNA-binding protein [Escherichia coli KTE67]
gi|432614154|ref|ZP_19850303.1| single-stranded DNA-binding protein [Escherichia coli KTE72]
gi|432619371|ref|ZP_19855467.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|432624455|ref|ZP_19860463.1| single-stranded DNA-binding protein [Escherichia coli KTE76]
gi|432625230|ref|ZP_19861225.1| single-stranded DNA-binding protein [Escherichia coli KTE77]
gi|432634064|ref|ZP_19869977.1| single-stranded DNA-binding protein [Escherichia coli KTE80]
gi|432634956|ref|ZP_19870850.1| single-stranded DNA-binding protein [Escherichia coli KTE81]
gi|432643656|ref|ZP_19879473.1| single-stranded DNA-binding protein [Escherichia coli KTE83]
gi|432648756|ref|ZP_19884537.1| single-stranded DNA-binding protein [Escherichia coli KTE86]
gi|432653750|ref|ZP_19889485.1| single-stranded DNA-binding protein [Escherichia coli KTE87]
gi|432658324|ref|ZP_19894016.1| single-stranded DNA-binding protein [Escherichia coli KTE93]
gi|432658901|ref|ZP_19894571.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
gi|432663779|ref|ZP_19899386.1| single-stranded DNA-binding protein [Escherichia coli KTE116]
gi|432668492|ref|ZP_19904055.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
gi|432677241|ref|ZP_19912678.1| single-stranded DNA-binding protein [Escherichia coli KTE142]
gi|432682853|ref|ZP_19918201.1| single-stranded DNA-binding protein [Escherichia coli KTE143]
gi|432683535|ref|ZP_19918864.1| single-stranded DNA-binding protein [Escherichia coli KTE156]
gi|432689381|ref|ZP_19924641.1| single-stranded DNA-binding protein [Escherichia coli KTE161]
gi|432696960|ref|ZP_19932147.1| single-stranded DNA-binding protein [Escherichia coli KTE162]
gi|432701600|ref|ZP_19936740.1| single-stranded DNA-binding protein [Escherichia coli KTE169]
gi|432702227|ref|ZP_19937361.1| single-stranded DNA-binding protein [Escherichia coli KTE171]
gi|432708481|ref|ZP_19943553.1| single-stranded DNA-binding protein [Escherichia coli KTE6]
gi|432715945|ref|ZP_19950966.1| single-stranded DNA-binding protein [Escherichia coli KTE8]
gi|432716692|ref|ZP_19951701.1| single-stranded DNA-binding protein [Escherichia coli KTE9]
gi|432721238|ref|ZP_19956171.1| single-stranded DNA-binding protein [Escherichia coli KTE17]
gi|432725636|ref|ZP_19960542.1| single-stranded DNA-binding protein [Escherichia coli KTE18]
gi|432730391|ref|ZP_19965255.1| single-stranded DNA-binding protein [Escherichia coli KTE45]
gi|432735108|ref|ZP_19969916.1| single-stranded DNA-binding protein [Escherichia coli KTE42]
gi|432739418|ref|ZP_19974142.1| single-stranded DNA-binding protein [Escherichia coli KTE23]
gi|432748059|ref|ZP_19982717.1| single-stranded DNA-binding protein [Escherichia coli KTE43]
gi|432752515|ref|ZP_19987089.1| single-stranded DNA-binding protein [Escherichia coli KTE29]
gi|432757050|ref|ZP_19991590.1| single-stranded DNA-binding protein [Escherichia coli KTE22]
gi|432761940|ref|ZP_19996409.1| single-stranded DNA-binding protein [Escherichia coli KTE46]
gi|432762967|ref|ZP_19997425.1| single-stranded DNA-binding protein [Escherichia coli KTE48]
gi|432768432|ref|ZP_20002819.1| single-stranded DNA-binding protein [Escherichia coli KTE50]
gi|432772832|ref|ZP_20007140.1| single-stranded DNA-binding protein [Escherichia coli KTE54]
gi|432776419|ref|ZP_20010680.1| single-stranded DNA-binding protein [Escherichia coli KTE59]
gi|432781419|ref|ZP_20015626.1| single-stranded DNA-binding protein [Escherichia coli KTE63]
gi|432790118|ref|ZP_20024242.1| single-stranded DNA-binding protein [Escherichia coli KTE65]
gi|432790844|ref|ZP_20024962.1| single-stranded DNA-binding protein [Escherichia coli KTE78]
gi|432796834|ref|ZP_20030864.1| single-stranded DNA-binding protein [Escherichia coli KTE79]
gi|432799991|ref|ZP_20033990.1| single-stranded DNA-binding protein [Escherichia coli KTE84]
gi|432808306|ref|ZP_20042216.1| single-stranded DNA-binding protein [Escherichia coli KTE91]
gi|432811810|ref|ZP_20045662.1| single-stranded DNA-binding protein [Escherichia coli KTE101]
gi|432817894|ref|ZP_20051621.1| single-stranded DNA-binding protein [Escherichia coli KTE115]
gi|432818885|ref|ZP_20052603.1| single-stranded DNA-binding protein [Escherichia coli KTE118]
gi|432825014|ref|ZP_20058675.1| single-stranded DNA-binding protein [Escherichia coli KTE123]
gi|432829674|ref|ZP_20063286.1| single-stranded DNA-binding protein [Escherichia coli KTE135]
gi|432832729|ref|ZP_20066279.1| single-stranded DNA-binding protein [Escherichia coli KTE136]
gi|432837156|ref|ZP_20070656.1| single-stranded DNA-binding protein [Escherichia coli KTE140]
gi|432841925|ref|ZP_20075367.1| single-stranded DNA-binding protein [Escherichia coli KTE141]
gi|432856304|ref|ZP_20083744.1| single-stranded DNA-binding protein [Escherichia coli KTE144]
gi|432857519|ref|ZP_20084389.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
gi|432872101|ref|ZP_20091980.1| single-stranded DNA-binding protein [Escherichia coli KTE147]
gi|432878620|ref|ZP_20095902.1| single-stranded DNA-binding protein [Escherichia coli KTE154]
gi|432882907|ref|ZP_20098527.1| single-stranded DNA-binding protein [Escherichia coli KTE158]
gi|432891921|ref|ZP_20104400.1| single-stranded DNA-binding protein [Escherichia coli KTE165]
gi|432896100|ref|ZP_20107377.1| single-stranded DNA-binding protein [Escherichia coli KTE192]
gi|432908027|ref|ZP_20116289.1| single-stranded DNA-binding protein [Escherichia coli KTE194]
gi|432908889|ref|ZP_20116480.1| single-stranded DNA-binding protein [Escherichia coli KTE190]
gi|432916271|ref|ZP_20121243.1| single-stranded DNA-binding protein [Escherichia coli KTE173]
gi|432923598|ref|ZP_20126152.1| single-stranded DNA-binding protein [Escherichia coli KTE175]
gi|432931894|ref|ZP_20131835.1| single-stranded DNA-binding protein [Escherichia coli KTE184]
gi|432941109|ref|ZP_20138803.1| single-stranded DNA-binding protein [Escherichia coli KTE183]
gi|432943926|ref|ZP_20140589.1| single-stranded DNA-binding protein [Escherichia coli KTE196]
gi|432951544|ref|ZP_20145048.1| single-stranded DNA-binding protein [Escherichia coli KTE197]
gi|432958075|ref|ZP_20149217.1| single-stranded DNA-binding protein [Escherichia coli KTE202]
gi|432965828|ref|ZP_20154748.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
gi|432969672|ref|ZP_20158565.1| single-stranded DNA-binding protein [Escherichia coli KTE207]
gi|432976319|ref|ZP_20165148.1| single-stranded DNA-binding protein [Escherichia coli KTE209]
gi|432978964|ref|ZP_20167759.1| single-stranded DNA-binding protein [Escherichia coli KTE211]
gi|432987933|ref|ZP_20176639.1| single-stranded DNA-binding protein [Escherichia coli KTE215]
gi|432988587|ref|ZP_20177263.1| single-stranded DNA-binding protein [Escherichia coli KTE217]
gi|432993300|ref|ZP_20181927.1| single-stranded DNA-binding protein [Escherichia coli KTE218]
gi|432997759|ref|ZP_20186335.1| single-stranded DNA-binding protein [Escherichia coli KTE223]
gi|433003035|ref|ZP_20191539.1| single-stranded DNA-binding protein [Escherichia coli KTE227]
gi|433010294|ref|ZP_20198702.1| single-stranded DNA-binding protein [Escherichia coli KTE229]
gi|433016423|ref|ZP_20204740.1| single-stranded DNA-binding protein [Escherichia coli KTE104]
gi|433021319|ref|ZP_20209387.1| single-stranded DNA-binding protein [Escherichia coli KTE105]
gi|433026005|ref|ZP_20213964.1| single-stranded DNA-binding protein [Escherichia coli KTE106]
gi|433031036|ref|ZP_20218872.1| single-stranded DNA-binding protein [Escherichia coli KTE109]
gi|433036000|ref|ZP_20223679.1| single-stranded DNA-binding protein [Escherichia coli KTE112]
gi|433041105|ref|ZP_20228685.1| single-stranded DNA-binding protein [Escherichia coli KTE113]
gi|433045602|ref|ZP_20233068.1| single-stranded DNA-binding protein [Escherichia coli KTE117]
gi|433050532|ref|ZP_20237842.1| single-stranded DNA-binding protein [Escherichia coli KTE120]
gi|433055691|ref|ZP_20242835.1| single-stranded DNA-binding protein [Escherichia coli KTE122]
gi|433060626|ref|ZP_20247649.1| single-stranded DNA-binding protein [Escherichia coli KTE124]
gi|433065531|ref|ZP_20252425.1| single-stranded DNA-binding protein [Escherichia coli KTE125]
gi|433070470|ref|ZP_20257223.1| single-stranded DNA-binding protein [Escherichia coli KTE128]
gi|433075426|ref|ZP_20262052.1| single-stranded DNA-binding protein [Escherichia coli KTE129]
gi|433080303|ref|ZP_20266812.1| single-stranded DNA-binding protein [Escherichia coli KTE131]
gi|433085018|ref|ZP_20271455.1| single-stranded DNA-binding protein [Escherichia coli KTE133]
gi|433089829|ref|ZP_20276179.1| single-stranded DNA-binding protein [Escherichia coli KTE137]
gi|433094461|ref|ZP_20280703.1| single-stranded DNA-binding protein [Escherichia coli KTE138]
gi|433098929|ref|ZP_20285087.1| single-stranded DNA-binding protein [Escherichia coli KTE139]
gi|433103691|ref|ZP_20289751.1| single-stranded DNA-binding protein [Escherichia coli KTE145]
gi|433108360|ref|ZP_20294311.1| single-stranded DNA-binding protein [Escherichia coli KTE148]
gi|433113373|ref|ZP_20299212.1| single-stranded DNA-binding protein [Escherichia coli KTE150]
gi|433118033|ref|ZP_20303804.1| single-stranded DNA-binding protein [Escherichia coli KTE153]
gi|433122755|ref|ZP_20308402.1| single-stranded DNA-binding protein [Escherichia coli KTE157]
gi|433127735|ref|ZP_20313267.1| single-stranded DNA-binding protein [Escherichia coli KTE160]
gi|433132652|ref|ZP_20318066.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
gi|433137323|ref|ZP_20322640.1| single-stranded DNA-binding protein [Escherichia coli KTE166]
gi|433141808|ref|ZP_20327037.1| single-stranded DNA-binding protein [Escherichia coli KTE167]
gi|433146728|ref|ZP_20331850.1| single-stranded DNA-binding protein [Escherichia coli KTE168]
gi|433151760|ref|ZP_20336748.1| single-stranded DNA-binding protein [Escherichia coli KTE174]
gi|433156329|ref|ZP_20341246.1| single-stranded DNA-binding protein [Escherichia coli KTE176]
gi|433161220|ref|ZP_20346026.1| single-stranded DNA-binding protein [Escherichia coli KTE177]
gi|433166115|ref|ZP_20350833.1| single-stranded DNA-binding protein [Escherichia coli KTE179]
gi|433171113|ref|ZP_20355721.1| single-stranded DNA-binding protein [Escherichia coli KTE180]
gi|433175994|ref|ZP_20360489.1| single-stranded DNA-binding protein [Escherichia coli KTE232]
gi|433180935|ref|ZP_20365299.1| single-stranded DNA-binding protein [Escherichia coli KTE82]
gi|433185883|ref|ZP_20370108.1| single-stranded DNA-binding protein [Escherichia coli KTE85]
gi|433190898|ref|ZP_20374975.1| single-stranded DNA-binding protein [Escherichia coli KTE88]
gi|433196124|ref|ZP_20380081.1| single-stranded DNA-binding protein [Escherichia coli KTE90]
gi|433200859|ref|ZP_20384732.1| single-stranded DNA-binding protein [Escherichia coli KTE94]
gi|433205819|ref|ZP_20389553.1| single-stranded DNA-binding protein [Escherichia coli KTE95]
gi|433210296|ref|ZP_20393950.1| single-stranded DNA-binding protein [Escherichia coli KTE97]
gi|433215135|ref|ZP_20398699.1| single-stranded DNA-binding protein [Escherichia coli KTE99]
gi|433326416|ref|ZP_20403257.1| single-stranded DNA-binding protein [Escherichia coli J96]
gi|442594696|ref|ZP_21012575.1| Single-stranded DNA-binding protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442598773|ref|ZP_21016522.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|442605837|ref|ZP_21020651.1| Single-stranded DNA-binding protein [Escherichia coli Nissle 1917]
gi|443615569|ref|YP_007379425.1| single-stranded DNA-binding protein [Escherichia coli APEC O78]
gi|444927843|ref|ZP_21247087.1| single-stranded DNA-binding protein [Escherichia coli 09BKT078844]
gi|444933468|ref|ZP_21252456.1| single-stranded DNA-binding protein [Escherichia coli 99.0814]
gi|444938909|ref|ZP_21257621.1| single-stranded DNA-binding protein [Escherichia coli 99.0815]
gi|444944538|ref|ZP_21263005.1| single-stranded DNA-binding protein [Escherichia coli 99.0816]
gi|444949981|ref|ZP_21268257.1| single-stranded DNA-binding protein [Escherichia coli 99.0839]
gi|444955600|ref|ZP_21273647.1| single-stranded DNA-binding protein [Escherichia coli 99.0848]
gi|444961035|ref|ZP_21278836.1| single-stranded DNA-binding protein [Escherichia coli 99.1753]
gi|444966264|ref|ZP_21283804.1| single-stranded DNA-binding protein [Escherichia coli 99.1775]
gi|444972315|ref|ZP_21289637.1| single-stranded DNA-binding protein [Escherichia coli 99.1793]
gi|444977566|ref|ZP_21294620.1| single-stranded DNA-binding protein [Escherichia coli 99.1805]
gi|444982957|ref|ZP_21299845.1| single-stranded DNA-binding protein [Escherichia coli ATCC 700728]
gi|444988304|ref|ZP_21305065.1| single-stranded DNA-binding protein [Escherichia coli PA11]
gi|444993698|ref|ZP_21310323.1| single-stranded DNA-binding protein [Escherichia coli PA19]
gi|444998881|ref|ZP_21315365.1| single-stranded DNA-binding protein [Escherichia coli PA13]
gi|445004436|ref|ZP_21320809.1| single-stranded DNA-binding protein [Escherichia coli PA2]
gi|445010023|ref|ZP_21326234.1| single-stranded DNA-binding protein [Escherichia coli PA47]
gi|445014956|ref|ZP_21331044.1| single-stranded DNA-binding protein [Escherichia coli PA48]
gi|445020815|ref|ZP_21336762.1| single-stranded DNA-binding protein [Escherichia coli PA8]
gi|445026251|ref|ZP_21342057.1| single-stranded DNA-binding protein [Escherichia coli 7.1982]
gi|445031644|ref|ZP_21347294.1| single-stranded DNA-binding protein [Escherichia coli 99.1781]
gi|445037108|ref|ZP_21352617.1| single-stranded DNA-binding protein [Escherichia coli 99.1762]
gi|445042806|ref|ZP_21358160.1| single-stranded DNA-binding protein [Escherichia coli PA35]
gi|445047941|ref|ZP_21363174.1| single-stranded DNA-binding protein [Escherichia coli 3.4880]
gi|445053528|ref|ZP_21368524.1| single-stranded DNA-binding protein [Escherichia coli 95.0083]
gi|445061505|ref|ZP_21374007.1| single-stranded DNA-binding protein [Escherichia coli 99.0670]
gi|450196401|ref|ZP_21892872.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
gi|450229425|ref|ZP_21897782.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
gi|450254177|ref|ZP_21902530.1| single-stranded DNA-binding protein [Escherichia coli S17]
gi|452968726|ref|ZP_21966953.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4009]
gi|84028790|sp|P0AGE2.2|SSB_ECO57 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|84028791|sp|P0AGE1.2|SSB_ECOL6 RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|84028792|sp|P0AGE0.2|SSB_ECOLI RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|84028793|sp|P0AGE3.2|SSB_SHIFL RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|37926356|pdb|1EQQ|A Chain A, Single Stranded Dna Binding Protein And Ssdna Complex
gi|37926357|pdb|1EQQ|B Chain B, Single Stranded Dna Binding Protein And Ssdna Complex
gi|37926358|pdb|1EQQ|C Chain C, Single Stranded Dna Binding Protein And Ssdna Complex
gi|37926359|pdb|1EQQ|D Chain D, Single Stranded Dna Binding Protein And Ssdna Complex
gi|26111292|gb|AAN83475.1|AE016770_275 Single-strand binding protein [Escherichia coli CFT073]
gi|396394|gb|AAC43153.1| single-strand DNA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|1790494|gb|AAC77029.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|13364518|dbj|BAB38464.1| ssDNA-binding protein [Escherichia coli O157:H7 str. Sakai]
gi|30042907|gb|AAP18630.1| ssDNA-binding protein [Shigella flexneri 2a str. 2457T]
gi|56384074|gb|AAN45567.2| ssDNA-binding protein [Shigella flexneri 2a str. 301]
gi|73858030|gb|AAZ90737.1| ssDNA-binding protein [Shigella sonnei Ss046]
gi|81247813|gb|ABB68521.1| ssDNA-binding protein [Shigella boydii Sb227]
gi|85676811|dbj|BAE78061.1| Single-stranded DNA-binding protein [Escherichia coli str. K12
substr. W3110]
gi|110345998|gb|ABG72235.1| single-strand binding protein [Escherichia coli 536]
gi|110617472|gb|ABF06139.1| ssDNA-binding protein [Shigella flexneri 5 str. 8401]
gi|157069208|gb|ABV08463.1| single-stranded DNA-binding protein [Escherichia coli HS]
gi|157080974|gb|ABV20682.1| single-stranded DNA-binding protein [Escherichia coli E24377A]
gi|169756870|gb|ACA79569.1| single-strand binding protein [Escherichia coli ATCC 8739]
gi|169891350|gb|ACB05057.1| Single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. DH10B]
gi|170520013|gb|ACB18191.1| single-stranded DNA-binding protein [Escherichia coli SMS-3-5]
gi|187769924|gb|EDU33768.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4196]
gi|188017416|gb|EDU55538.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4113]
gi|188487526|gb|EDU62629.1| single-stranded DNA-binding protein [Escherichia coli 53638]
gi|189001691|gb|EDU70677.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4076]
gi|189357468|gb|EDU75887.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4401]
gi|189364141|gb|EDU82560.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4486]
gi|189368538|gb|EDU86954.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4501]
gi|189374931|gb|EDU93347.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC869]
gi|189379074|gb|EDU97490.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC508]
gi|190901176|gb|EDV60949.1| single-stranded DNA-binding protein [Escherichia coli B7A]
gi|190907738|gb|EDV67332.1| single-stranded DNA-binding protein [Escherichia coli F11]
gi|192931325|gb|EDV83927.1| single-stranded DNA-binding protein [Escherichia coli E22]
gi|192958856|gb|EDV89293.1| single-stranded DNA-binding protein [Escherichia coli E110019]
gi|194415171|gb|EDX31440.1| single-stranded DNA-binding protein [Escherichia coli B171]
gi|194419522|gb|EDX35603.1| single-stranded DNA-binding protein [Shigella dysenteriae 1012]
gi|194423717|gb|EDX39706.1| single-stranded DNA-binding protein [Escherichia coli 101-1]
gi|208726257|gb|EDZ75858.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4206]
gi|208735285|gb|EDZ83972.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4045]
gi|208738557|gb|EDZ86239.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4042]
gi|209158537|gb|ACI35970.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC4115]
gi|209751198|gb|ACI73906.1| ssDNA-binding protein [Escherichia coli]
gi|209751200|gb|ACI73907.1| ssDNA-binding protein [Escherichia coli]
gi|209751202|gb|ACI73908.1| ssDNA-binding protein [Escherichia coli]
gi|209751204|gb|ACI73909.1| ssDNA-binding protein [Escherichia coli]
gi|209751206|gb|ACI73910.1| ssDNA-binding protein [Escherichia coli]
gi|209914803|dbj|BAG79877.1| single-strand DNA-binding protein [Escherichia coli SE11]
gi|215267477|emb|CAS11931.1| single-stranded DNA-binding protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217320876|gb|EEC29300.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14588]
gi|218354500|emb|CAV01358.1| Single-stranded DNA-binding protein [Escherichia coli 55989]
gi|218358922|emb|CAQ91583.1| Single-stranded DNA-binding protein [Escherichia fergusonii ATCC
35469]
gi|218363386|emb|CAR01039.1| Single-stranded DNA-binding protein [Escherichia coli IAI1]
gi|218367911|emb|CAR05708.1| Single-stranded DNA-binding protein [Escherichia coli S88]
gi|218372710|emb|CAR20586.1| Single-stranded DNA-binding protein [Escherichia coli IAI39]
gi|218429913|emb|CAR10744.1| Single-stranded DNA-binding protein [Escherichia coli ED1a]
gi|218434778|emb|CAR15711.1| Single-stranded DNA-binding protein [Escherichia coli UMN026]
gi|222035780|emb|CAP78525.1| Single-stranded DNA-binding protein [Escherichia coli LF82]
gi|227836060|gb|EEJ46526.1| single-stranded DNA-binding protein [Escherichia coli 83972]
gi|238863556|gb|ACR65554.1| single-stranded DNA-binding protein [Escherichia coli BW2952]
gi|242379587|emb|CAQ34408.1| ssDNA-binding protein [Escherichia coli BL21(DE3)]
gi|253326356|gb|ACT30958.1| single-strand binding protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975896|gb|ACT41567.1| single-strand DNA-binding protein [Escherichia coli B str. REL606]
gi|253980052|gb|ACT45722.1| single-strand DNA-binding protein [Escherichia coli BL21(DE3)]
gi|254595479|gb|ACT74840.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
TW14359]
gi|257756819|dbj|BAI28321.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
11368]
gi|257762001|dbj|BAI33498.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
12009]
gi|257767175|dbj|BAI38670.1| single-stranded DNA-binding protein [Escherichia coli O111:H- str.
11128]
gi|260451111|gb|ACX41533.1| single-strand binding protein [Escherichia coli DH1]
gi|281181139|dbj|BAI57469.1| single-strand DNA-binding protein [Escherichia coli SE15]
gi|284924153|emb|CBG37252.1| single-stranded binding protein [Escherichia coli 042]
gi|290765349|gb|ADD59310.1| Single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
CB9615]
gi|291320817|gb|EFE60259.1| single-stranded DNA-binding protein [Escherichia coli B088]
gi|291429613|gb|EFF02627.1| single-stranded DNA-binding protein [Escherichia coli FVEC1412]
gi|291430282|gb|EFF03280.1| single-stranded DNA-binding protein [Escherichia coli B185]
gi|291472043|gb|EFF14525.1| single-stranded DNA-binding protein [Escherichia coli B354]
gi|294491516|gb|ADE90272.1| single-stranded DNA-binding protein [Escherichia coli IHE3034]
gi|298280561|gb|EFI22062.1| single-stranded DNA-binding protein [Escherichia coli FVEC1302]
gi|299882356|gb|EFI90567.1| single-strand binding family protein [Escherichia coli MS 196-1]
gi|300301037|gb|EFJ57422.1| single-strand binding family protein [Escherichia coli MS 185-1]
gi|300307827|gb|EFJ62347.1| single-strand binding family protein [Escherichia coli MS 200-1]
gi|300315745|gb|EFJ65529.1| single-strand binding family protein [Escherichia coli MS 175-1]
gi|300356629|gb|EFJ72499.1| single-strand binding family protein [Escherichia coli MS 198-1]
gi|300397961|gb|EFJ81499.1| single-strand binding family protein [Escherichia coli MS 69-1]
gi|300401819|gb|EFJ85357.1| single-strand binding family protein [Escherichia coli MS 84-1]
gi|300406718|gb|EFJ90256.1| single-strand binding family protein [Escherichia coli MS 45-1]
gi|300415465|gb|EFJ98775.1| single-strand binding family protein [Escherichia coli MS 115-1]
gi|300419488|gb|EFK02799.1| single-strand binding family protein [Escherichia coli MS 182-1]
gi|300453682|gb|EFK17302.1| single-strand binding family protein [Escherichia coli MS 116-1]
gi|300456791|gb|EFK20284.1| single-strand binding family protein [Escherichia coli MS 21-1]
gi|300462264|gb|EFK25757.1| single-strand binding family protein [Escherichia coli MS 187-1]
gi|300523933|gb|EFK45002.1| single-strand binding family protein [Escherichia coli MS 119-7]
gi|300529388|gb|EFK50450.1| single-strand binding family protein [Escherichia coli MS 107-1]
gi|300841960|gb|EFK69720.1| single-strand binding family protein [Escherichia coli MS 124-1]
gi|300843484|gb|EFK71244.1| single-strand binding family protein [Escherichia coli MS 78-1]
gi|301076671|gb|EFK91477.1| single-strand binding family protein [Escherichia coli MS 146-1]
gi|305850796|gb|EFM51252.1| single-stranded DNA-binding protein [Escherichia coli NC101]
gi|306907906|gb|EFN38407.1| single-strand binding protein [Escherichia coli W]
gi|307556220|gb|ADN48995.1| single-strand binding protein [Escherichia coli ABU 83972]
gi|307629122|gb|ADN73426.1| single-stranded DNA-binding protein [Escherichia coli UM146]
gi|308120527|gb|EFO57789.1| single-strand binding family protein [Escherichia coli MS 145-7]
gi|309704526|emb|CBJ03875.1| single-stranded binding protein [Escherichia coli ETEC H10407]
gi|310331679|gb|EFP98935.1| single-stranded DNA-binding protein [Escherichia coli 1827-70]
gi|312289639|gb|EFR17530.1| single-stranded DNA-binding protein [Escherichia coli 2362-75]
gi|312948645|gb|ADR29472.1| single-stranded DNA-binding protein [Escherichia coli O83:H1 str.
NRG 857C]
gi|313648742|gb|EFS13182.1| single-stranded DNA-binding protein [Shigella flexneri 2a str.
2457T]
gi|315063383|gb|ADT77710.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|315138614|dbj|BAJ45773.1| single strand DNA-binding protein [Escherichia coli DH1]
gi|315254732|gb|EFU34700.1| single-strand binding family protein [Escherichia coli MS 85-1]
gi|315287928|gb|EFU47330.1| single-strand binding family protein [Escherichia coli MS 110-3]
gi|315291571|gb|EFU50931.1| single-strand binding family protein [Escherichia coli MS 153-1]
gi|315297495|gb|EFU56774.1| single-strand binding family protein [Escherichia coli MS 16-3]
gi|315617430|gb|EFU98036.1| single-stranded DNA-binding protein [Escherichia coli 3431]
gi|320176443|gb|EFW51495.1| Single-stranded DNA-binding protein [Shigella dysenteriae CDC
74-1112]
gi|320179056|gb|EFW54015.1| Single-stranded DNA-binding protein [Shigella boydii ATCC 9905]
gi|320183077|gb|EFW57940.1| Single-stranded DNA-binding protein [Shigella flexneri CDC 796-83]
gi|320190814|gb|EFW65464.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
EC1212]
gi|320193427|gb|EFW68064.1| Single-stranded DNA-binding protein [Escherichia coli WV_060327]
gi|320200808|gb|EFW75394.1| Single-stranded DNA-binding protein [Escherichia coli EC4100B]
gi|320638816|gb|EFX08462.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
G5101]
gi|320644184|gb|EFX13249.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
493-89]
gi|320649503|gb|EFX18027.1| single-stranded DNA-binding protein [Escherichia coli O157:H- str.
H 2687]
gi|320654899|gb|EFX22860.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660747|gb|EFX28204.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665676|gb|EFX32713.1| single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
LSU-61]
gi|323155898|gb|EFZ42066.1| single-stranded DNA-binding protein [Escherichia coli EPECa14]
gi|323164542|gb|EFZ50343.1| single-stranded DNA-binding protein [Shigella sonnei 53G]
gi|323171203|gb|EFZ56851.1| single-stranded DNA-binding protein [Escherichia coli LT-68]
gi|323175948|gb|EFZ61540.1| single-stranded DNA-binding protein [Escherichia coli OK1180]
gi|323182164|gb|EFZ67574.1| single-stranded DNA-binding protein [Escherichia coli OK1357]
gi|323190068|gb|EFZ75346.1| single-stranded DNA-binding protein [Escherichia coli RN587/1]
gi|323380553|gb|ADX52821.1| single-strand binding protein [Escherichia coli KO11FL]
gi|323935549|gb|EGB31880.1| single-strand binding protein [Escherichia coli E1520]
gi|323940243|gb|EGB36436.1| single-strand binding protein [Escherichia coli E482]
gi|323946193|gb|EGB42227.1| single-strand binding protein [Escherichia coli H120]
gi|323950383|gb|EGB46264.1| single-strand binding protein [Escherichia coli H252]
gi|323954465|gb|EGB50249.1| single-strand binding protein [Escherichia coli H263]
gi|323960466|gb|EGB56099.1| single-strand binding protein [Escherichia coli H489]
gi|323965721|gb|EGB61173.1| single-strand binding protein [Escherichia coli M863]
gi|323969805|gb|EGB65086.1| single-strand binding protein [Escherichia coli TA007]
gi|323975306|gb|EGB70409.1| single-strand binding protein [Escherichia coli TW10509]
gi|324007771|gb|EGB76990.1| single-strand binding family protein [Escherichia coli MS 57-2]
gi|324014869|gb|EGB84088.1| single-strand binding family protein [Escherichia coli MS 60-1]
gi|324017097|gb|EGB86316.1| single-strand binding family protein [Escherichia coli MS 117-3]
gi|324112292|gb|EGC06270.1| single-strand binding protein [Escherichia fergusonii B253]
gi|324118632|gb|EGC12524.1| single-strand binding protein [Escherichia coli E1167]
gi|325499649|gb|EGC97508.1| Ssb [Escherichia fergusonii ECD227]
gi|326341894|gb|EGD65677.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1125]
gi|326346532|gb|EGD70266.1| Single-stranded DNA-binding protein [Escherichia coli O157:H7 str.
1044]
gi|327250404|gb|EGE62117.1| single-stranded DNA-binding protein [Escherichia coli STEC_7v]
gi|330908394|gb|EGH36913.1| single-stranded DNA-binding protein [Escherichia coli AA86]
gi|331046235|gb|EGI18325.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli M718]
gi|331051678|gb|EGI23717.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA206]
gi|331056780|gb|EGI28774.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA143]
gi|331061837|gb|EGI33762.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA271]
gi|331067199|gb|EGI38607.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli TA280]
gi|331081211|gb|EGI52372.1| single-stranded DNA-binding protein (SSB)
(Helix-destabilizingprotein) [Escherichia coli H299]
gi|332083553|gb|EGI88773.1| single-stranded DNA-binding protein [Shigella boydii 5216-82]
gi|332084331|gb|EGI89534.1| single-stranded DNA-binding protein [Shigella dysenteriae 155-74]
gi|332087768|gb|EGI92894.1| single-stranded DNA-binding protein [Shigella boydii 3594-74]
gi|332346060|gb|AEE59394.1| single-stranded DNA-binding protein [Escherichia coli UMNK88]
gi|332752004|gb|EGJ82397.1| single-stranded DNA-binding protein [Shigella flexneri 4343-70]
gi|332752174|gb|EGJ82566.1| single-stranded DNA-binding protein [Shigella flexneri K-671]
gi|332753330|gb|EGJ83711.1| single-stranded DNA-binding protein [Shigella flexneri 2747-71]
gi|332764766|gb|EGJ94995.1| ssDNA-binding protein [Shigella flexneri 2930-71]
gi|332999058|gb|EGK18647.1| single-stranded DNA-binding protein [Shigella flexneri K-272]
gi|332999218|gb|EGK18805.1| single-stranded DNA-binding protein [Shigella flexneri K-218]
gi|333014197|gb|EGK33553.1| single-stranded DNA-binding protein [Shigella flexneri K-304]
gi|333014408|gb|EGK33759.1| single-stranded DNA-binding protein [Shigella flexneri K-227]
gi|333972270|gb|AEG39075.1| Single-stranded DNA-binding protein [Escherichia coli NA114]
gi|335572612|gb|EGM58983.1| ssDNA-binding protein [Shigella flexneri J1713]
gi|338767758|gb|EGP22568.1| Single-stranded DNA-binding protein [Escherichia coli PCN033]
gi|339417788|gb|AEJ59460.1| single-stranded DNA-binding protein [Escherichia coli UMNF18]
gi|340732081|gb|EGR61220.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
01-09591]
gi|340737656|gb|EGR71911.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
LB226692]
gi|341920849|gb|EGT70454.1| hypothetical protein C22711_4487 [Escherichia coli O104:H4 str.
C227-11]
gi|342363434|gb|EGU27542.1| single-stranded DNA-binding protein [Escherichia coli XH140A]
gi|342930172|gb|EGU98894.1| single-strand binding protein [Escherichia coli MS 79-10]
gi|345330870|gb|EGW63333.1| single-stranded DNA-binding protein [Escherichia coli 2534-86]
gi|345331963|gb|EGW64421.1| single-stranded DNA-binding protein [Escherichia coli STEC_B2F1]
gi|345342652|gb|EGW75044.1| single-stranded DNA-binding protein [Escherichia coli STEC_C165-02]
gi|345346331|gb|EGW78661.1| single-stranded DNA-binding protein [Escherichia coli STEC_94C]
gi|345347324|gb|EGW79636.1| single-stranded DNA-binding protein [Escherichia coli 3030-1]
gi|345352495|gb|EGW84743.1| single-stranded DNA-binding protein [Escherichia coli STEC_DG131-3]
gi|345368422|gb|EGX00420.1| single-stranded DNA-binding protein [Escherichia coli G58-1]
gi|345384304|gb|EGX14171.1| single-stranded DNA-binding protein [Escherichia coli STEC_S1191]
gi|345389613|gb|EGX19418.1| single-stranded DNA-binding protein [Escherichia coli TX1999]
gi|349740738|gb|AEQ15444.1| single-stranded DNA-binding protein [Escherichia coli O7:K1 str.
CE10]
gi|354856301|gb|EHF16761.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C236-11]
gi|354860867|gb|EHF21308.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
04-8351]
gi|354861392|gb|EHF21832.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
C227-11]
gi|354870097|gb|EHF30503.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
09-7901]
gi|354874496|gb|EHF34864.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-3677]
gi|354883738|gb|EHF44053.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4404]
gi|354888000|gb|EHF48263.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4522]
gi|354891684|gb|EHF51910.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4623]
gi|354903385|gb|EHF63487.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354907031|gb|EHF67098.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354908972|gb|EHF69009.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354911098|gb|EHF71104.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354919651|gb|EHF79593.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-4632 C5]
gi|355349233|gb|EHF98442.1| single strand DNA-binding protein [Escherichia coli cloneA_i1]
gi|355422950|gb|AER87147.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i2']
gi|355427870|gb|AER92066.1| single-stranded DNA-binding protein [Escherichia coli str. 'clone D
i14']
gi|359334169|dbj|BAL40616.1| single-stranded DNA-binding protein [Escherichia coli str. K-12
substr. MDS42]
gi|371596940|gb|EHN85766.1| single-stranded DNA-binding protein [Escherichia coli H494]
gi|371597795|gb|EHN86614.1| single-stranded DNA-binding protein [Escherichia coli TA124]
gi|371606174|gb|EHN94772.1| single-stranded DNA-binding protein [Escherichia coli H397]
gi|371610291|gb|EHN98820.1| single-stranded DNA-binding protein [Escherichia coli B093]
gi|371614816|gb|EHO03299.1| single-stranded DNA-binding protein [Escherichia coli E101]
gi|373247523|gb|EHP66964.1| single-stranded DNA-binding protein [Escherichia coli 4_1_47FAA]
gi|374361508|gb|AEZ43215.1| single-stranded DNA-binding protein [Escherichia coli O55:H7 str.
RM12579]
gi|375321668|gb|EHS67483.1| single-stranded DNA-binding protein [Escherichia coli O157:H43 str.
T22]
gi|377838078|gb|EHU03204.1| ssDNA-binding protein [Escherichia coli DEC1A]
gi|377838158|gb|EHU03282.1| ssDNA-binding protein [Escherichia coli DEC1C]
gi|377840362|gb|EHU05435.1| ssDNA-binding protein [Escherichia coli DEC1B]
gi|377854797|gb|EHU19673.1| ssDNA-binding protein [Escherichia coli DEC1E]
gi|377856056|gb|EHU20917.1| single-stranded DNA-binding protein [Escherichia coli DEC2A]
gi|377864762|gb|EHU29554.1| single-stranded DNA-binding protein [Escherichia coli DEC1D]
gi|377869619|gb|EHU34330.1| ssDNA-binding protein [Escherichia coli DEC2B]
gi|377871028|gb|EHU35696.1| ssDNA-binding protein [Escherichia coli DEC2C]
gi|377872805|gb|EHU37447.1| ssDNA-binding protein [Escherichia coli DEC2D]
gi|377885025|gb|EHU49531.1| ssDNA-binding protein [Escherichia coli DEC2E]
gi|377887870|gb|EHU52344.1| ssDNA-binding protein [Escherichia coli DEC3A]
gi|377888315|gb|EHU52786.1| ssDNA-binding protein [Escherichia coli DEC3B]
gi|377901059|gb|EHU65382.1| ssDNA-binding protein [Escherichia coli DEC3C]
gi|377904991|gb|EHU69268.1| ssDNA-binding protein [Escherichia coli DEC3D]
gi|377905853|gb|EHU70112.1| ssDNA-binding protein [Escherichia coli DEC3E]
gi|377916380|gb|EHU80467.1| ssDNA-binding protein [Escherichia coli DEC3F]
gi|377922430|gb|EHU86416.1| ssDNA-binding protein [Escherichia coli DEC4A]
gi|377925325|gb|EHU89265.1| ssDNA-binding protein [Escherichia coli DEC4B]
gi|377935745|gb|EHU99539.1| ssDNA-binding protein [Escherichia coli DEC4D]
gi|377936635|gb|EHV00429.1| ssDNA-binding protein [Escherichia coli DEC4C]
gi|377942964|gb|EHV06687.1| ssDNA-binding protein [Escherichia coli DEC4E]
gi|377952751|gb|EHV16332.1| ssDNA-binding protein [Escherichia coli DEC4F]
gi|377956045|gb|EHV19596.1| ssDNA-binding protein [Escherichia coli DEC5A]
gi|377960680|gb|EHV24159.1| ssDNA-binding protein [Escherichia coli DEC5B]
gi|377968112|gb|EHV31506.1| ssDNA-binding protein [Escherichia coli DEC5C]
gi|377969407|gb|EHV32784.1| ssDNA-binding protein [Escherichia coli DEC5D]
gi|377978293|gb|EHV41572.1| single-stranded DNA-binding protein [Escherichia coli DEC5E]
gi|377987595|gb|EHV50780.1| ssDNA-binding protein [Escherichia coli DEC6B]
gi|377988044|gb|EHV51225.1| single-stranded DNA-binding protein [Escherichia coli DEC6A]
gi|377990829|gb|EHV53986.1| single-stranded DNA-binding protein [Escherichia coli DEC6C]
gi|378003058|gb|EHV66104.1| single-stranded DNA-binding protein [Escherichia coli DEC6D]
gi|378005334|gb|EHV68338.1| ssDNA-binding protein [Escherichia coli DEC6E]
gi|378008955|gb|EHV71913.1| single-stranded DNA-binding protein [Escherichia coli DEC7A]
gi|378020395|gb|EHV83141.1| ssDNA-binding protein [Escherichia coli DEC7C]
gi|378022960|gb|EHV85641.1| ssDNA-binding protein [Escherichia coli DEC7D]
gi|378027330|gb|EHV89960.1| ssDNA-binding protein [Escherichia coli DEC7B]
gi|378033688|gb|EHV96263.1| single-stranded DNA-binding protein [Escherichia coli DEC7E]
gi|378041628|gb|EHW04087.1| single-stranded DNA-binding protein [Escherichia coli DEC8A]
gi|378042076|gb|EHW04528.1| ssDNA-binding protein [Escherichia coli DEC8B]
gi|378046730|gb|EHW09104.1| ssDNA-binding protein [Escherichia coli DEC8C]
gi|378056778|gb|EHW19017.1| ssDNA-binding protein [Escherichia coli DEC8D]
gi|378059401|gb|EHW21601.1| ssDNA-binding protein [Escherichia coli DEC8E]
gi|378067008|gb|EHW29135.1| ssDNA-binding protein [Escherichia coli DEC9A]
gi|378071902|gb|EHW33966.1| ssDNA-binding protein [Escherichia coli DEC9B]
gi|378078109|gb|EHW40100.1| ssDNA-binding protein [Escherichia coli DEC9C]
gi|378085468|gb|EHW47355.1| ssDNA-binding protein [Escherichia coli DEC9D]
gi|378088369|gb|EHW50223.1| ssDNA-binding protein [Escherichia coli DEC9E]
gi|378095441|gb|EHW57227.1| ssDNA-binding protein [Escherichia coli DEC10A]
gi|378100738|gb|EHW62430.1| ssDNA-binding protein [Escherichia coli DEC10B]
gi|378106121|gb|EHW67757.1| ssDNA-binding protein [Escherichia coli DEC10C]
gi|378111970|gb|EHW73551.1| ssDNA-binding protein [Escherichia coli DEC10D]
gi|378122389|gb|EHW83817.1| ssDNA-binding protein [Escherichia coli DEC10E]
gi|378123067|gb|EHW84485.1| ssDNA-binding protein [Escherichia coli DEC11A]
gi|378123888|gb|EHW85304.1| ssDNA-binding protein [Escherichia coli DEC10F]
gi|378137440|gb|EHW98716.1| ssDNA-binding protein [Escherichia coli DEC11B]
gi|378143099|gb|EHX04292.1| single-stranded DNA-binding protein [Escherichia coli DEC11D]
gi|378145040|gb|EHX06207.1| single-stranded DNA-binding protein [Escherichia coli DEC11C]
gi|378153805|gb|EHX14884.1| single-stranded DNA-binding protein [Escherichia coli DEC11E]
gi|378159983|gb|EHX20981.1| ssDNA-binding protein [Escherichia coli DEC12B]
gi|378163286|gb|EHX24239.1| single-stranded DNA-binding protein [Escherichia coli DEC12A]
gi|378164183|gb|EHX25130.1| single-stranded DNA-binding protein [Escherichia coli DEC12C]
gi|378178265|gb|EHX39034.1| ssDNA-binding protein [Escherichia coli DEC12D]
gi|378181464|gb|EHX42135.1| ssDNA-binding protein [Escherichia coli DEC12E]
gi|378181524|gb|EHX42194.1| ssDNA-binding protein [Escherichia coli DEC13A]
gi|378194760|gb|EHX55270.1| ssDNA-binding protein [Escherichia coli DEC13C]
gi|378194919|gb|EHX55427.1| ssDNA-binding protein [Escherichia coli DEC13B]
gi|378196924|gb|EHX57408.1| ssDNA-binding protein [Escherichia coli DEC13D]
gi|378207624|gb|EHX68014.1| ssDNA-binding protein [Escherichia coli DEC13E]
gi|378211673|gb|EHX72009.1| single-stranded DNA-binding protein [Escherichia coli DEC14A]
gi|378213183|gb|EHX73501.1| ssDNA-binding protein [Escherichia coli DEC14B]
gi|378222960|gb|EHX83191.1| ssDNA-binding protein [Escherichia coli DEC14C]
gi|378232295|gb|EHX92396.1| ssDNA-binding protein [Escherichia coli DEC15A]
gi|378238679|gb|EHX98673.1| ssDNA-binding protein [Escherichia coli DEC15B]
gi|378241527|gb|EHY01493.1| ssDNA-binding protein [Escherichia coli DEC15C]
gi|378249397|gb|EHY09306.1| ssDNA-binding protein [Escherichia coli DEC15D]
gi|378254600|gb|EHY14463.1| ssDNA-binding protein [Escherichia coli DEC15E]
gi|380345950|gb|EIA34256.1| single-stranded DNA-binding protein [Escherichia coli SCI-07]
gi|383105468|gb|AFG42977.1| Single-stranded DNA-binding protein [Escherichia coli P12b]
gi|383390445|gb|AFH15403.1| single-stranded DNA-binding protein [Escherichia coli KO11FL]
gi|383407700|gb|AFH13943.1| single-stranded DNA-binding protein [Escherichia coli W]
gi|383469347|gb|EID64368.1| single-stranded DNA-binding protein [Shigella flexneri 5a str.
M90T]
gi|383477025|gb|EID68952.1| single-stranded DNA-binding protein [Escherichia coli W26]
gi|384377168|gb|EIE35064.1| single-stranded DNA-binding protein [Escherichia coli J53]
gi|384471313|gb|EIE55395.1| single-stranded DNA-binding protein [Escherichia coli AI27]
gi|385154494|gb|EIF16506.1| single-stranded DNA-binding protein [Escherichia coli O32:H37 str.
P4]
gi|385541046|gb|EIF87858.1| single-stranded DNA-binding protein [Escherichia coli M919]
gi|385708049|gb|EIG45069.1| single-stranded DNA-binding protein [Escherichia coli H730]
gi|385708324|gb|EIG45337.1| single-stranded DNA-binding protein [Escherichia coli B799]
gi|386124182|gb|EIG72765.1| single-stranded DNA-binding protein [Escherichia sp. 4_1_40B]
gi|386139022|gb|EIG80177.1| single-stranded DNA-binding protein [Escherichia coli 1.2741]
gi|386144245|gb|EIG90712.1| single-stranded DNA-binding protein [Escherichia coli 97.0246]
gi|386150092|gb|EIH01381.1| single-stranded DNA-binding protein [Escherichia coli 5.0588]
gi|386155599|gb|EIH11950.1| single-stranded DNA-binding protein [Escherichia coli 97.0259]
gi|386161156|gb|EIH22959.1| single-stranded DNA-binding protein [Escherichia coli 1.2264]
gi|386166734|gb|EIH33254.1| single-stranded DNA-binding protein [Escherichia coli 96.0497]
gi|386171504|gb|EIH43548.1| single-stranded DNA-binding protein [Escherichia coli 99.0741]
gi|386177201|gb|EIH54680.1| single-stranded DNA-binding protein [Escherichia coli 3.2608]
gi|386181715|gb|EIH64476.1| single-stranded DNA-binding protein [Escherichia coli 93.0624]
gi|386187464|gb|EIH76283.1| single-stranded DNA-binding protein [Escherichia coli 4.0522]
gi|386197684|gb|EIH91883.1| single-stranded DNA-binding protein [Escherichia coli JB1-95]
gi|386199208|gb|EIH98199.1| single-stranded DNA-binding protein [Escherichia coli 96.154]
gi|386205854|gb|EII10361.1| single-stranded DNA-binding protein [Escherichia coli 5.0959]
gi|386213318|gb|EII23747.1| single-stranded DNA-binding protein [Escherichia coli 9.0111]
gi|386219572|gb|EII36036.1| single-stranded DNA-binding protein [Escherichia coli 4.0967]
gi|386225482|gb|EII47812.1| single-stranded DNA-binding protein [Escherichia coli 2.3916]
gi|386227410|gb|EII54766.1| single-stranded DNA-binding protein [Escherichia coli 3.3884]
gi|386234032|gb|EII66012.1| single-stranded DNA-binding protein [Escherichia coli 2.4168]
gi|386237441|gb|EII74386.1| single-stranded DNA-binding protein [Escherichia coli 3.2303]
gi|386246683|gb|EII88413.1| single-stranded DNA-binding protein [Escherichia coli 3003]
gi|386248690|gb|EII94862.1| single-stranded DNA-binding protein [Escherichia coli TW07793]
gi|386251652|gb|EIJ01344.1| single-stranded DNA-binding protein [Escherichia coli B41]
gi|386259173|gb|EIJ14647.1| single-stranded DNA-binding protein [Escherichia coli 900105 (10e)]
gi|386798742|gb|AFJ31776.1| single-stranded DNA-binding protein [Escherichia coli Xuzhou21]
gi|388333046|gb|EIK99689.1| single-stranded DNA-binding protein [Escherichia coli O103:H2 str.
CVM9450]
gi|388343557|gb|EIL09489.1| single-stranded DNA-binding protein [Escherichia coli O103:H25 str.
CVM9340]
gi|388351101|gb|EIL16379.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9534]
gi|388352881|gb|EIL17964.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9545]
gi|388357928|gb|EIL22426.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9570]
gi|388365771|gb|EIL29547.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9574]
gi|388372667|gb|EIL36084.1| single-strand binding protein [Escherichia coli O26:H11 str.
CVM10026]
gi|388373894|gb|EIL37118.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9942]
gi|388384788|gb|EIL46496.1| single-stranded DNA-binding protein [Escherichia coli 541-15]
gi|388387672|gb|EIL49282.1| single-stranded DNA-binding protein [Escherichia coli KD2]
gi|388390071|gb|EIL51571.1| single-stranded DNA-binding protein [Escherichia coli KD1]
gi|388402526|gb|EIL63098.1| single-stranded DNA-binding protein [Escherichia coli 541-1]
gi|388403637|gb|EIL64141.1| single-stranded DNA-binding protein [Escherichia coli 576-1]
gi|388410798|gb|EIL71001.1| single-stranded DNA-binding protein [Escherichia coli 75]
gi|388415649|gb|EIL75571.1| single-stranded DNA-binding protein [Escherichia coli CUMT8]
gi|388421786|gb|EIL81387.1| single-stranded DNA-binding protein [Escherichia coli HM605]
gi|390636385|gb|EIN15969.1| single-stranded DNA-binding protein [Escherichia coli FRIK1996]
gi|390636814|gb|EIN16384.1| single-stranded DNA-binding protein [Escherichia coli FDA505]
gi|390637617|gb|EIN17159.1| single-stranded DNA-binding protein [Escherichia coli FDA517]
gi|390655434|gb|EIN33378.1| single-stranded DNA-binding protein [Escherichia coli FRIK1985]
gi|390656210|gb|EIN34096.1| single-stranded DNA-binding protein [Escherichia coli 93-001]
gi|390658160|gb|EIN35961.1| single-stranded DNA-binding protein [Escherichia coli FRIK1990]
gi|390673286|gb|EIN49530.1| single-stranded DNA-binding protein [Escherichia coli PA3]
gi|390679994|gb|EIN55850.1| single-stranded DNA-binding protein [Escherichia coli PA9]
gi|390691146|gb|EIN65910.1| single-stranded DNA-binding protein [Escherichia coli PA10]
gi|390695576|gb|EIN70100.1| single-stranded DNA-binding protein [Escherichia coli PA14]
gi|390696879|gb|EIN71320.1| single-stranded DNA-binding protein [Escherichia coli PA15]
gi|390710809|gb|EIN83811.1| single-stranded DNA-binding protein [Escherichia coli PA22]
gi|390716227|gb|EIN89042.1| single-stranded DNA-binding protein [Escherichia coli PA24]
gi|390717449|gb|EIN90234.1| single-stranded DNA-binding protein [Escherichia coli PA25]
gi|390723490|gb|EIN96085.1| single-stranded DNA-binding protein [Escherichia coli PA28]
gi|390736044|gb|EIO07399.1| single-stranded DNA-binding protein [Escherichia coli PA31]
gi|390736675|gb|EIO08002.1| single-stranded DNA-binding protein [Escherichia coli PA32]
gi|390740460|gb|EIO11589.1| single-stranded DNA-binding protein [Escherichia coli PA33]
gi|390755000|gb|EIO24550.1| single-stranded DNA-binding protein [Escherichia coli PA40]
gi|390756563|gb|EIO26070.1| single-stranded DNA-binding protein [Escherichia coli PA39]
gi|390761186|gb|EIO30488.1| single-stranded DNA-binding protein [Escherichia coli PA41]
gi|390764219|gb|EIO33433.1| single-stranded DNA-binding protein [Escherichia coli PA42]
gi|390778143|gb|EIO45901.1| single-stranded DNA-binding protein [Escherichia coli TW06591]
gi|390784529|gb|EIO52096.1| single-stranded DNA-binding protein [Escherichia coli TW07945]
gi|390792334|gb|EIO59688.1| single-stranded DNA-binding protein [Escherichia coli TW11039]
gi|390796048|gb|EIO63324.1| single-stranded DNA-binding protein [Escherichia coli TW10246]
gi|390799238|gb|EIO66413.1| single-stranded DNA-binding protein [Escherichia coli TW09098]
gi|390803904|gb|EIO70891.1| single-stranded DNA-binding protein [Escherichia coli TW09109]
gi|390820433|gb|EIO86739.1| single-stranded DNA-binding protein [Escherichia coli TW10119]
gi|390820858|gb|EIO87113.1| single-stranded DNA-binding protein [Escherichia coli TW09195]
gi|390821867|gb|EIO88033.1| single-stranded DNA-binding protein [Escherichia coli EC4203]
gi|390826970|gb|EIO92768.1| single-stranded DNA-binding protein [Escherichia coli EC4196]
gi|390839935|gb|EIP04013.1| single-stranded DNA-binding protein [Escherichia coli TW14313]
gi|390842147|gb|EIP06019.1| single-stranded DNA-binding protein [Escherichia coli TW14301]
gi|390847185|gb|EIP10734.1| single-stranded DNA-binding protein [Escherichia coli EC4421]
gi|390857623|gb|EIP20050.1| single-stranded DNA-binding protein [Escherichia coli EC4422]
gi|390862042|gb|EIP24255.1| single-stranded DNA-binding protein [Escherichia coli EC4013]
gi|390865782|gb|EIP27777.1| single-stranded DNA-binding protein [Escherichia coli EC4402]
gi|390874475|gb|EIP35597.1| single-stranded DNA-binding protein [Escherichia coli EC4439]
gi|390879716|gb|EIP40460.1| single-stranded DNA-binding protein [Escherichia coli EC4436]
gi|390889575|gb|EIP49300.1| single-stranded DNA-binding protein [Escherichia coli EC4437]
gi|390890741|gb|EIP50398.1| single-stranded DNA-binding protein [Escherichia coli EC4448]
gi|390897531|gb|EIP56851.1| single-stranded DNA-binding protein [Escherichia coli EC1738]
gi|390905275|gb|EIP64226.1| single-stranded DNA-binding protein [Escherichia coli EC1734]
gi|390914076|gb|EIP72623.1| single-stranded DNA-binding protein [Escherichia coli EC1845]
gi|390914797|gb|EIP73328.1| single-stranded DNA-binding protein [Escherichia coli EC1863]
gi|391245829|gb|EIQ05095.1| single-stranded DNA-binding protein [Shigella flexneri 2850-71]
gi|391247537|gb|EIQ06785.1| single-stranded DNA-binding protein [Shigella flexneri CCH060]
gi|391258876|gb|EIQ17960.1| single-stranded DNA-binding protein [Shigella flexneri K-315]
gi|391262922|gb|EIQ21933.1| single-stranded DNA-binding protein [Shigella boydii 965-58]
gi|391263450|gb|EIQ22456.1| single-stranded DNA-binding protein [Shigella flexneri K-404]
gi|391271131|gb|EIQ30007.1| single-stranded DNA-binding protein [Shigella boydii 4444-74]
gi|391276765|gb|EIQ35527.1| single-stranded DNA-binding protein [Shigella sonnei 3226-85]
gi|391279930|gb|EIQ38610.1| single-stranded DNA-binding protein [Shigella sonnei 3233-85]
gi|391291288|gb|EIQ49698.1| ssDNA-binding protein [Shigella sonnei 4822-66]
gi|391293492|gb|EIQ51764.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|391296649|gb|EIQ54733.1| single-stranded DNA-binding protein [Shigella dysenteriae 225-75]
gi|391300732|gb|EIQ58640.1| single-stranded DNA-binding protein [Escherichia coli EPECa12]
gi|391308722|gb|EIQ66412.1| ssDNA-binding protein [Escherichia coli EPEC C342-62]
gi|394388831|gb|EJE66069.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9602]
gi|394392224|gb|EJE69013.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10224]
gi|394394663|gb|EJE71223.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CVM9634]
gi|394412079|gb|EJE86257.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9553]
gi|394414584|gb|EJE88525.1| hypothetical protein ECO10021_28380 [Escherichia coli O26:H11 str.
CVM10021]
gi|394422414|gb|EJE95775.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM10030]
gi|394422836|gb|EJE96149.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CVM9455]
gi|394433693|gb|EJF05700.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CVM9952]
gi|397782143|gb|EJK93011.1| single-stranded DNA-binding protein [Escherichia coli STEC_O31]
gi|397894270|gb|EJL10717.1| ssDNA-binding protein [Shigella sonnei str. Moseley]
gi|397895083|gb|EJL11517.1| ssDNA-binding protein [Shigella flexneri 6603-63]
gi|404293224|gb|EEH72166.2| single-stranded DNA-binding protein [Escherichia sp. 1_1_43]
gi|404336125|gb|EJZ62588.1| ssDNA-binding protein [Shigella flexneri 1485-80]
gi|406779918|gb|AFS59342.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056507|gb|AFS76558.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2011C-3493]
gi|407063103|gb|AFS84150.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408061724|gb|EKG96232.1| single-stranded DNA-binding protein [Escherichia coli FRIK920]
gi|408062730|gb|EKG97231.1| single-stranded DNA-binding protein [Escherichia coli PA34]
gi|408073053|gb|EKH07362.1| single-stranded DNA-binding protein [Escherichia coli PA7]
gi|408079613|gb|EKH13728.1| single-stranded DNA-binding protein [Escherichia coli FDA507]
gi|408087894|gb|EKH21296.1| single-stranded DNA-binding protein [Escherichia coli FDA504]
gi|408092660|gb|EKH25845.1| single-stranded DNA-binding protein [Escherichia coli FDA506]
gi|408100376|gb|EKH32882.1| single-stranded DNA-binding protein [Escherichia coli FRIK1997]
gi|408105182|gb|EKH37382.1| single-stranded DNA-binding protein [Escherichia coli NE1487]
gi|408112004|gb|EKH43694.1| single-stranded DNA-binding protein [Escherichia coli NE037]
gi|408124510|gb|EKH55174.1| single-stranded DNA-binding protein [Escherichia coli PA4]
gi|408133504|gb|EKH63401.1| single-stranded DNA-binding protein [Escherichia coli FRIK2001]
gi|408134433|gb|EKH64264.1| single-stranded DNA-binding protein [Escherichia coli PA23]
gi|408135922|gb|EKH65681.1| single-stranded DNA-binding protein [Escherichia coli PA49]
gi|408143300|gb|EKH72608.1| single-stranded DNA-binding protein [Escherichia coli PA45]
gi|408151628|gb|EKH80115.1| single-stranded DNA-binding protein [Escherichia coli TT12B]
gi|408156717|gb|EKH84917.1| single-stranded DNA-binding protein [Escherichia coli MA6]
gi|408160880|gb|EKH88871.1| single-stranded DNA-binding protein [Escherichia coli 5905]
gi|408169768|gb|EKH97013.1| single-stranded DNA-binding protein [Escherichia coli CB7326]
gi|408176521|gb|EKI03369.1| single-stranded DNA-binding protein [Escherichia coli EC96038]
gi|408179569|gb|EKI06227.1| single-stranded DNA-binding protein [Escherichia coli 5412]
gi|408189225|gb|EKI14975.1| single-stranded DNA-binding protein [Escherichia coli TW15901]
gi|408196616|gb|EKI21895.1| single-stranded DNA-binding protein [Escherichia coli ARS4.2123]
gi|408196922|gb|EKI22196.1| single-stranded DNA-binding protein [Escherichia coli TW00353]
gi|408208419|gb|EKI33068.1| single-stranded DNA-binding protein [Escherichia coli 3006]
gi|408209211|gb|EKI33813.1| single-stranded DNA-binding protein [Escherichia coli PA38]
gi|408209774|gb|EKI34358.1| single-stranded DNA-binding protein [Escherichia coli 07798]
gi|408223135|gb|EKI46930.1| single-stranded DNA-binding protein [Escherichia coli EC1735]
gi|408224142|gb|EKI47868.1| single-stranded DNA-binding protein [Escherichia coli N1]
gi|408234321|gb|EKI57346.1| single-stranded DNA-binding protein [Escherichia coli EC1736]
gi|408236817|gb|EKI59698.1| single-stranded DNA-binding protein [Escherichia coli EC1737]
gi|408242493|gb|EKI65076.1| single-stranded DNA-binding protein [Escherichia coli EC1846]
gi|408251234|gb|EKI72983.1| single-stranded DNA-binding protein [Escherichia coli EC1847]
gi|408255572|gb|EKI77007.1| single-stranded DNA-binding protein [Escherichia coli EC1848]
gi|408262148|gb|EKI83098.1| single-stranded DNA-binding protein [Escherichia coli EC1849]
gi|408270649|gb|EKI90830.1| single-stranded DNA-binding protein [Escherichia coli EC1850]
gi|408273483|gb|EKI93537.1| single-stranded DNA-binding protein [Escherichia coli EC1856]
gi|408281740|gb|EKJ01128.1| single-stranded DNA-binding protein [Escherichia coli EC1862]
gi|408287638|gb|EKJ06495.1| single-stranded DNA-binding protein [Escherichia coli EC1864]
gi|408292581|gb|EKJ11092.1| single-stranded DNA-binding protein [Escherichia coli EC1865]
gi|408302586|gb|EKJ20090.1| single-stranded DNA-binding protein [Escherichia coli EC1868]
gi|408303707|gb|EKJ21156.1| single-stranded DNA-binding protein [Escherichia coli EC1866]
gi|408315143|gb|EKJ31472.1| single-stranded DNA-binding protein [Escherichia coli EC1869]
gi|408320779|gb|EKJ36850.1| single-stranded DNA-binding protein [Escherichia coli EC1870]
gi|408322258|gb|EKJ38252.1| single-stranded DNA-binding protein [Escherichia coli NE098]
gi|408333587|gb|EKJ48536.1| single-stranded DNA-binding protein [Escherichia coli FRIK523]
gi|408340134|gb|EKJ54643.1| single-stranded DNA-binding protein [Escherichia coli 0.1288]
gi|408341123|gb|EKJ55594.1| single-stranded DNA-binding protein [Escherichia coli 0.1304]
gi|408457703|gb|EKJ81496.1| single-stranded DNA-binding protein [Escherichia coli AD30]
gi|408543933|gb|EKK21406.1| single-stranded DNA-binding protein [Escherichia coli 5.2239]
gi|408544487|gb|EKK21940.1| single-stranded DNA-binding protein [Escherichia coli 3.4870]
gi|408544946|gb|EKK22387.1| single-stranded DNA-binding protein [Escherichia coli 6.0172]
gi|408562429|gb|EKK38591.1| single-stranded DNA-binding protein [Escherichia coli 8.0566]
gi|408562462|gb|EKK38623.1| single-stranded DNA-binding protein [Escherichia coli 8.0586]
gi|408563527|gb|EKK39659.1| single-stranded DNA-binding protein [Escherichia coli 8.0569]
gi|408575237|gb|EKK50921.1| single-stranded DNA-binding protein [Escherichia coli 10.0833]
gi|408577487|gb|EKK53060.1| single-stranded DNA-binding protein [Escherichia coli 8.2524]
gi|408587873|gb|EKK62497.1| single-stranded DNA-binding protein [Escherichia coli 10.0869]
gi|408592786|gb|EKK67142.1| single-stranded DNA-binding protein [Escherichia coli 88.0221]
gi|408598131|gb|EKK72091.1| single-stranded DNA-binding protein [Escherichia coli 8.0416]
gi|408607251|gb|EKK80655.1| single-stranded DNA-binding protein [Escherichia coli 10.0821]
gi|412965461|emb|CCK49394.1| ssDNA-binding protein [Escherichia coli chi7122]
gi|412972040|emb|CCJ46710.1| ssDNA-binding protein [Escherichia coli]
gi|421936666|gb|EKT94327.1| single-stranded DNA-binding protein [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421939594|gb|EKT97109.1| single-stranded DNA-binding protein [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421948834|gb|EKU05834.1| single-stranded DNA-binding protein [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427200600|gb|EKV71013.1| single-stranded DNA-binding protein [Escherichia coli 89.0511]
gi|427200774|gb|EKV71186.1| single-stranded DNA-binding protein [Escherichia coli 88.1042]
gi|427203754|gb|EKV74052.1| single-stranded DNA-binding protein [Escherichia coli 88.1467]
gi|427216882|gb|EKV85971.1| single-stranded DNA-binding protein [Escherichia coli 90.0091]
gi|427220973|gb|EKV89860.1| single-stranded DNA-binding protein [Escherichia coli 90.2281]
gi|427223502|gb|EKV92246.1| single-stranded DNA-binding protein [Escherichia coli 90.0039]
gi|427237133|gb|EKW04677.1| single-stranded DNA-binding protein [Escherichia coli 93.0056]
gi|427237317|gb|EKW04860.1| single-stranded DNA-binding protein [Escherichia coli 93.0055]
gi|427241682|gb|EKW09106.1| single-stranded DNA-binding protein [Escherichia coli 94.0618]
gi|427254988|gb|EKW21264.1| single-stranded DNA-binding protein [Escherichia coli 95.0183]
gi|427256700|gb|EKW22855.1| single-stranded DNA-binding protein [Escherichia coli 95.1288]
gi|427256865|gb|EKW23013.1| single-stranded DNA-binding protein [Escherichia coli 95.0943]
gi|427272654|gb|EKW37379.1| single-stranded DNA-binding protein [Escherichia coli 96.0428]
gi|427273880|gb|EKW38546.1| single-stranded DNA-binding protein [Escherichia coli 96.0427]
gi|427279895|gb|EKW44295.1| single-stranded DNA-binding protein [Escherichia coli 96.0939]
gi|427288433|gb|EKW52067.1| single-stranded DNA-binding protein [Escherichia coli 96.0932]
gi|427295504|gb|EKW58612.1| single-stranded DNA-binding protein [Escherichia coli 96.0107]
gi|427296722|gb|EKW59770.1| single-stranded DNA-binding protein [Escherichia coli 97.0003]
gi|427306891|gb|EKW69388.1| single-stranded DNA-binding protein [Escherichia coli 97.1742]
gi|427309766|gb|EKW72059.1| single-stranded DNA-binding protein [Escherichia coli 97.0007]
gi|427314688|gb|EKW76727.1| single-stranded DNA-binding protein [Escherichia coli 99.0672]
gi|427324257|gb|EKW85736.1| single-stranded DNA-binding protein [Escherichia coli 99.0678]
gi|427325471|gb|EKW86911.1| single-stranded DNA-binding protein [Escherichia coli 99.0713]
gi|429250243|gb|EKY34908.1| single-stranded DNA-binding protein [Escherichia coli 96.0109]
gi|429250678|gb|EKY35329.1| single-stranded DNA-binding protein [Escherichia coli 97.0010]
gi|429354141|gb|EKY90845.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02030]
gi|429354994|gb|EKY91688.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02033-1]
gi|429355986|gb|EKY92669.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02092]
gi|429369711|gb|EKZ06286.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02093]
gi|429370006|gb|EKZ06573.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02281]
gi|429371751|gb|EKZ08302.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02318]
gi|429385878|gb|EKZ22330.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-02913]
gi|429387827|gb|EKZ24258.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03439]
gi|429388007|gb|EKZ24434.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-03943]
gi|429398955|gb|EKZ35280.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
11-04080]
gi|429401070|gb|EKZ37379.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429403632|gb|EKZ39914.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429412025|gb|EKZ48223.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429414158|gb|EKZ50334.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429422277|gb|EKZ58397.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429425154|gb|EKZ61245.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429430873|gb|EKZ66924.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429437750|gb|EKZ73748.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429441605|gb|EKZ77574.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429446947|gb|EKZ82872.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429453186|gb|EKZ89055.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458240|gb|EKZ94069.1| single-stranded DNA-binding protein [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430872257|gb|ELB95871.1| single-stranded DNA-binding protein [Escherichia coli KTE4]
gi|430881983|gb|ELC05188.1| single-stranded DNA-binding protein [Escherichia coli KTE2]
gi|430882614|gb|ELC05693.1| single-stranded DNA-binding protein [Escherichia coli KTE5]
gi|430890156|gb|ELC12793.1| single-stranded DNA-binding protein [Escherichia coli KTE10]
gi|430893039|gb|ELC15387.1| single-stranded DNA-binding protein [Escherichia coli KTE11]
gi|430894950|gb|ELC17226.1| single-stranded DNA-binding protein [Escherichia coli KTE12]
gi|430902626|gb|ELC24483.1| single-stranded DNA-binding protein [Escherichia coli KTE15]
gi|430911597|gb|ELC32878.1| single-stranded DNA-binding protein [Escherichia coli KTE16]
gi|430912556|gb|ELC33729.1| single-stranded DNA-binding protein [Escherichia coli KTE21]
gi|430919764|gb|ELC40685.1| single-stranded DNA-binding protein [Escherichia coli KTE25]
gi|430922121|gb|ELC42885.1| single-stranded DNA-binding protein [Escherichia coli KTE26]
gi|430925642|gb|ELC46308.1| single-stranded DNA-binding protein [Escherichia coli KTE28]
gi|430939954|gb|ELC60160.1| single-stranded DNA-binding protein [Escherichia coli KTE39]
gi|430946304|gb|ELC66247.1| single-stranded DNA-binding protein [Escherichia coli KTE44]
gi|430949003|gb|ELC68584.1| single-stranded DNA-binding protein [Escherichia coli KTE178]
gi|430949767|gb|ELC69193.1| single-stranded DNA-binding protein [Escherichia coli KTE181]
gi|430958108|gb|ELC76706.1| single-stranded DNA-binding protein [Escherichia coli KTE187]
gi|430959255|gb|ELC77589.1| single-stranded DNA-binding protein [Escherichia coli KTE188]
gi|430960287|gb|ELC78443.1| single-stranded DNA-binding protein [Escherichia coli KTE189]
gi|430970449|gb|ELC87521.1| single-stranded DNA-binding protein [Escherichia coli KTE191]
gi|430976492|gb|ELC93358.1| single-stranded DNA-binding protein [Escherichia coli KTE193]
gi|430984625|gb|ELD01247.1| single-stranded DNA-binding protein [Escherichia coli KTE204]
gi|430987437|gb|ELD03976.1| single-stranded DNA-binding protein [Escherichia coli KTE201]
gi|430989373|gb|ELD05829.1| single-stranded DNA-binding protein [Escherichia coli KTE205]
gi|430994925|gb|ELD11237.1| single-stranded DNA-binding protein [Escherichia coli KTE206]
gi|431001230|gb|ELD16817.1| single-stranded DNA-binding protein [Escherichia coli KTE208]
gi|431011972|gb|ELD26042.1| single-stranded DNA-binding protein [Escherichia coli KTE210]
gi|431012826|gb|ELD26586.1| single-stranded DNA-binding protein [Escherichia coli KTE212]
gi|431016500|gb|ELD30045.1| single-stranded DNA-binding protein [Escherichia coli KTE213]
gi|431025282|gb|ELD38393.1| single-stranded DNA-binding protein [Escherichia coli KTE216]
gi|431030129|gb|ELD43150.1| single-stranded DNA-binding protein [Escherichia coli KTE214]
gi|431034311|gb|ELD46252.1| single-stranded DNA-binding protein [Escherichia coli KTE220]
gi|431037385|gb|ELD48371.1| single-stranded DNA-binding protein [Escherichia coli KTE224]
gi|431046789|gb|ELD56882.1| single-stranded DNA-binding protein [Escherichia coli KTE230]
gi|431046865|gb|ELD56956.1| single-stranded DNA-binding protein [Escherichia coli KTE228]
gi|431058925|gb|ELD68302.1| single-stranded DNA-binding protein [Escherichia coli KTE233]
gi|431065916|gb|ELD74665.1| single-stranded DNA-binding protein [Escherichia coli KTE234]
gi|431066223|gb|ELD74967.1| single-stranded DNA-binding protein [Escherichia coli KTE235]
gi|431069519|gb|ELD77847.1| single-stranded DNA-binding protein [Escherichia coli KTE236]
gi|431075044|gb|ELD82579.1| single-stranded DNA-binding protein [Escherichia coli KTE237]
gi|431087984|gb|ELD93896.1| single-stranded DNA-binding protein [Escherichia coli KTE47]
gi|431095847|gb|ELE01448.1| single-stranded DNA-binding protein [Escherichia coli KTE49]
gi|431102282|gb|ELE07108.1| single-stranded DNA-binding protein [Escherichia coli KTE51]
gi|431104553|gb|ELE08928.1| single-stranded DNA-binding protein [Escherichia coli KTE53]
gi|431110679|gb|ELE14597.1| single-stranded DNA-binding protein [Escherichia coli KTE56]
gi|431112873|gb|ELE16554.1| single-stranded DNA-binding protein [Escherichia coli KTE55]
gi|431124265|gb|ELE26917.1| single-stranded DNA-binding protein [Escherichia coli KTE57]
gi|431125161|gb|ELE27591.1| single-stranded DNA-binding protein [Escherichia coli KTE58]
gi|431134800|gb|ELE36743.1| single-stranded DNA-binding protein [Escherichia coli KTE60]
gi|431135315|gb|ELE37230.1| single-stranded DNA-binding protein [Escherichia coli KTE62]
gi|431135538|gb|ELE37414.1| single-stranded DNA-binding protein [Escherichia coli KTE66]
gi|431143513|gb|ELE45238.1| single-stranded DNA-binding protein [Escherichia coli KTE67]
gi|431145475|gb|ELE47125.1| single-stranded DNA-binding protein [Escherichia coli KTE72]
gi|431150303|gb|ELE51360.1| single-stranded DNA-binding protein [Escherichia coli KTE75]
gi|431154507|gb|ELE55310.1| single-stranded DNA-binding protein [Escherichia coli KTE76]
gi|431166535|gb|ELE66850.1| single-stranded DNA-binding protein [Escherichia coli KTE80]
gi|431167169|gb|ELE67453.1| single-stranded DNA-binding protein [Escherichia coli KTE77]
gi|431175600|gb|ELE75602.1| single-stranded DNA-binding protein [Escherichia coli KTE81]
gi|431176548|gb|ELE76506.1| single-stranded DNA-binding protein [Escherichia coli KTE83]
gi|431177097|gb|ELE77035.1| single-stranded DNA-binding protein [Escherichia coli KTE86]
gi|431186385|gb|ELE85947.1| single-stranded DNA-binding protein [Escherichia coli KTE87]
gi|431186963|gb|ELE86495.1| single-stranded DNA-binding protein [Escherichia coli KTE93]
gi|431205132|gb|ELF03640.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
gi|431206114|gb|ELF04546.1| single-stranded DNA-binding protein [Escherichia coli KTE116]
gi|431209339|gb|ELF07448.1| single-stranded DNA-binding protein [Escherichia coli KTE142]
gi|431215512|gb|ELF13200.1| single-stranded DNA-binding protein [Escherichia coli KTE119]
gi|431216428|gb|ELF14066.1| single-stranded DNA-binding protein [Escherichia coli KTE143]
gi|431226759|gb|ELF23917.1| single-stranded DNA-binding protein [Escherichia coli KTE156]
gi|431229559|gb|ELF26203.1| single-stranded DNA-binding protein [Escherichia coli KTE162]
gi|431233807|gb|ELF29393.1| single-stranded DNA-binding protein [Escherichia coli KTE161]
gi|431239237|gb|ELF33882.1| single-stranded DNA-binding protein [Escherichia coli KTE169]
gi|431248640|gb|ELF42833.1| single-stranded DNA-binding protein [Escherichia coli KTE171]
gi|431250357|gb|ELF44418.1| single-stranded DNA-binding protein [Escherichia coli KTE8]
gi|431254054|gb|ELF47530.1| single-stranded DNA-binding protein [Escherichia coli KTE6]
gi|431269072|gb|ELF60431.1| single-stranded DNA-binding protein [Escherichia coli KTE9]
gi|431269761|gb|ELF61066.1| single-stranded DNA-binding protein [Escherichia coli KTE17]
gi|431278372|gb|ELF69365.1| single-stranded DNA-binding protein [Escherichia coli KTE18]
gi|431279651|gb|ELF70605.1| single-stranded DNA-binding protein [Escherichia coli KTE45]
gi|431287449|gb|ELF78259.1| single-stranded DNA-binding protein [Escherichia coli KTE23]
gi|431288837|gb|ELF79593.1| single-stranded DNA-binding protein [Escherichia coli KTE43]
gi|431288908|gb|ELF79663.1| single-stranded DNA-binding protein [Escherichia coli KTE42]
gi|431292456|gb|ELF82844.1| single-stranded DNA-binding protein [Escherichia coli KTE29]
gi|431298518|gb|ELF88143.1| single-stranded DNA-binding protein [Escherichia coli KTE22]
gi|431304263|gb|ELF92795.1| single-stranded DNA-binding protein [Escherichia coli KTE46]
gi|431314635|gb|ELG02568.1| single-stranded DNA-binding protein [Escherichia coli KTE48]
gi|431321258|gb|ELG08871.1| single-stranded DNA-binding protein [Escherichia coli KTE50]
gi|431322979|gb|ELG10536.1| single-stranded DNA-binding protein [Escherichia coli KTE54]
gi|431333166|gb|ELG20381.1| single-stranded DNA-binding protein [Escherichia coli KTE59]
gi|431333551|gb|ELG20738.1| single-stranded DNA-binding protein [Escherichia coli KTE63]
gi|431334351|gb|ELG21513.1| single-stranded DNA-binding protein [Escherichia coli KTE65]
gi|431344159|gb|ELG31113.1| single-stranded DNA-binding protein [Escherichia coli KTE78]
gi|431346819|gb|ELG33713.1| single-stranded DNA-binding protein [Escherichia coli KTE79]
gi|431351529|gb|ELG38315.1| single-stranded DNA-binding protein [Escherichia coli KTE91]
gi|431353347|gb|ELG40101.1| single-stranded DNA-binding protein [Escherichia coli KTE84]
gi|431358566|gb|ELG45217.1| single-stranded DNA-binding protein [Escherichia coli KTE101]
gi|431358883|gb|ELG45528.1| single-stranded DNA-binding protein [Escherichia coli KTE115]
gi|431372085|gb|ELG57781.1| single-stranded DNA-binding protein [Escherichia coli KTE118]
gi|431377010|gb|ELG62149.1| single-stranded DNA-binding protein [Escherichia coli KTE123]
gi|431381258|gb|ELG65889.1| single-stranded DNA-binding protein [Escherichia coli KTE135]
gi|431389928|gb|ELG73637.1| single-stranded DNA-binding protein [Escherichia coli KTE136]
gi|431394124|gb|ELG77665.1| single-stranded DNA-binding protein [Escherichia coli KTE140]
gi|431396130|gb|ELG79616.1| single-stranded DNA-binding protein [Escherichia coli KTE144]
gi|431399577|gb|ELG82982.1| single-stranded DNA-binding protein [Escherichia coli KTE141]
gi|431406415|gb|ELG89635.1| single-stranded DNA-binding protein [Escherichia coli KTE147]
gi|431410688|gb|ELG93844.1| single-stranded DNA-binding protein [Escherichia coli KTE146]
gi|431416485|gb|ELG98971.1| single-stranded DNA-binding protein [Escherichia coli KTE154]
gi|431422152|gb|ELH04346.1| single-stranded DNA-binding protein [Escherichia coli KTE158]
gi|431425652|gb|ELH07721.1| single-stranded DNA-binding protein [Escherichia coli KTE194]
gi|431427716|gb|ELH09659.1| single-stranded DNA-binding protein [Escherichia coli KTE165]
gi|431432989|gb|ELH14664.1| single-stranded DNA-binding protein [Escherichia coli KTE192]
gi|431450349|gb|ELH30836.1| single-stranded DNA-binding protein [Escherichia coli KTE190]
gi|431450483|gb|ELH30969.1| single-stranded DNA-binding protein [Escherichia coli KTE173]
gi|431451596|gb|ELH32068.1| single-stranded DNA-binding protein [Escherichia coli KTE175]
gi|431458478|gb|ELH38802.1| single-stranded DNA-binding protein [Escherichia coli KTE184]
gi|431459113|gb|ELH39429.1| single-stranded DNA-binding protein [Escherichia coli KTE183]
gi|431466065|gb|ELH46144.1| single-stranded DNA-binding protein [Escherichia coli KTE196]
gi|431475189|gb|ELH54993.1| single-stranded DNA-binding protein [Escherichia coli KTE203]
gi|431476589|gb|ELH56379.1| single-stranded DNA-binding protein [Escherichia coli KTE197]
gi|431484688|gb|ELH64362.1| single-stranded DNA-binding protein [Escherichia coli KTE209]
gi|431484878|gb|ELH64549.1| single-stranded DNA-binding protein [Escherichia coli KTE202]
gi|431488987|gb|ELH68616.1| single-stranded DNA-binding protein [Escherichia coli KTE207]
gi|431492265|gb|ELH71867.1| single-stranded DNA-binding protein [Escherichia coli KTE215]
gi|431500576|gb|ELH79590.1| single-stranded DNA-binding protein [Escherichia coli KTE211]
gi|431501544|gb|ELH80525.1| single-stranded DNA-binding protein [Escherichia coli KTE217]
gi|431513098|gb|ELH91184.1| single-stranded DNA-binding protein [Escherichia coli KTE218]
gi|431520037|gb|ELH97466.1| single-stranded DNA-binding protein [Escherichia coli KTE223]
gi|431520464|gb|ELH97790.1| single-stranded DNA-binding protein [Escherichia coli KTE229]
gi|431520800|gb|ELH98120.1| single-stranded DNA-binding protein [Escherichia coli KTE227]
gi|431525332|gb|ELI02129.1| single-stranded DNA-binding protein [Escherichia coli KTE104]
gi|431525842|gb|ELI02616.1| single-stranded DNA-binding protein [Escherichia coli KTE105]
gi|431529162|gb|ELI05865.1| single-stranded DNA-binding protein [Escherichia coli KTE106]
gi|431538863|gb|ELI14843.1| single-stranded DNA-binding protein [Escherichia coli KTE109]
gi|431544861|gb|ELI19672.1| single-stranded DNA-binding protein [Escherichia coli KTE112]
gi|431547081|gb|ELI21463.1| single-stranded DNA-binding protein [Escherichia coli KTE113]
gi|431550763|gb|ELI24751.1| single-stranded DNA-binding protein [Escherichia coli KTE117]
gi|431560803|gb|ELI34310.1| single-stranded DNA-binding protein [Escherichia coli KTE120]
gi|431564319|gb|ELI37495.1| single-stranded DNA-binding protein [Escherichia coli KTE122]
gi|431564807|gb|ELI37974.1| single-stranded DNA-binding protein [Escherichia coli KTE124]
gi|431577147|gb|ELI49799.1| single-stranded DNA-binding protein [Escherichia coli KTE125]
gi|431577659|gb|ELI50289.1| single-stranded DNA-binding protein [Escherichia coli KTE128]
gi|431581005|gb|ELI53460.1| single-stranded DNA-binding protein [Escherichia coli KTE129]
gi|431592003|gb|ELI62910.1| single-stranded DNA-binding protein [Escherichia coli KTE131]
gi|431596868|gb|ELI66809.1| single-stranded DNA-binding protein [Escherichia coli KTE133]
gi|431599333|gb|ELI69040.1| single-stranded DNA-binding protein [Escherichia coli KTE137]
gi|431605815|gb|ELI75202.1| single-stranded DNA-binding protein [Escherichia coli KTE138]
gi|431611443|gb|ELI80721.1| single-stranded DNA-binding protein [Escherichia coli KTE139]
gi|431614419|gb|ELI83573.1| single-stranded DNA-binding protein [Escherichia coli KTE145]
gi|431622677|gb|ELI91364.1| single-stranded DNA-binding protein [Escherichia coli KTE148]
gi|431623376|gb|ELI92048.1| single-stranded DNA-binding protein [Escherichia coli KTE150]
gi|431629540|gb|ELI97902.1| single-stranded DNA-binding protein [Escherichia coli KTE153]
gi|431637688|gb|ELJ05742.1| single-stranded DNA-binding protein [Escherichia coli KTE157]
gi|431639144|gb|ELJ07015.1| single-stranded DNA-binding protein [Escherichia coli KTE160]
gi|431640976|gb|ELJ08721.1| single-stranded DNA-binding protein [Escherichia coli KTE163]
gi|431652456|gb|ELJ19606.1| single-stranded DNA-binding protein [Escherichia coli KTE166]
gi|431654285|gb|ELJ21344.1| single-stranded DNA-binding protein [Escherichia coli KTE167]
gi|431656348|gb|ELJ23335.1| single-stranded DNA-binding protein [Escherichia coli KTE168]
gi|431666338|gb|ELJ32980.1| single-stranded DNA-binding protein [Escherichia coli KTE174]
gi|431668946|gb|ELJ35385.1| single-stranded DNA-binding protein [Escherichia coli KTE176]
gi|431672205|gb|ELJ38477.1| single-stranded DNA-binding protein [Escherichia coli KTE177]
gi|431682317|gb|ELJ48084.1| single-stranded DNA-binding protein [Escherichia coli KTE179]
gi|431682752|gb|ELJ48401.1| single-stranded DNA-binding protein [Escherichia coli KTE180]
gi|431685683|gb|ELJ51251.1| single-stranded DNA-binding protein [Escherichia coli KTE232]
gi|431696980|gb|ELJ62129.1| single-stranded DNA-binding protein [Escherichia coli KTE82]
gi|431700415|gb|ELJ65394.1| single-stranded DNA-binding protein [Escherichia coli KTE85]
gi|431700593|gb|ELJ65570.1| single-stranded DNA-binding protein [Escherichia coli KTE88]
gi|431712309|gb|ELJ76606.1| single-stranded DNA-binding protein [Escherichia coli KTE90]
gi|431714761|gb|ELJ78940.1| single-stranded DNA-binding protein [Escherichia coli KTE95]
gi|431715596|gb|ELJ79743.1| single-stranded DNA-binding protein [Escherichia coli KTE94]
gi|431727603|gb|ELJ91358.1| single-stranded DNA-binding protein [Escherichia coli KTE97]
gi|431730607|gb|ELJ94170.1| single-stranded DNA-binding protein [Escherichia coli KTE99]
gi|432345510|gb|ELL40013.1| single-stranded DNA-binding protein [Escherichia coli J96]
gi|441605235|emb|CCP97834.1| Single-stranded DNA-binding protein [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441652531|emb|CCQ02073.1| Single-stranded DNA-binding protein [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|441713099|emb|CCQ06628.1| Single-stranded DNA-binding protein [Escherichia coli Nissle 1917]
gi|443420077|gb|AGC84981.1| single-stranded DNA-binding protein [Escherichia coli APEC O78]
gi|444534547|gb|ELV14773.1| single-stranded DNA-binding protein [Escherichia coli 99.0814]
gi|444535518|gb|ELV15589.1| single-stranded DNA-binding protein [Escherichia coli 09BKT078844]
gi|444544872|gb|ELV23862.1| single-stranded DNA-binding protein [Escherichia coli 99.0815]
gi|444553609|gb|ELV31219.1| single-stranded DNA-binding protein [Escherichia coli 99.0816]
gi|444553967|gb|ELV31556.1| single-stranded DNA-binding protein [Escherichia coli 99.0839]
gi|444558644|gb|ELV35919.1| single-stranded DNA-binding protein [Escherichia coli 99.0848]
gi|444568139|gb|ELV44833.1| single-stranded DNA-binding protein [Escherichia coli 99.1753]
gi|444571388|gb|ELV47872.1| single-stranded DNA-binding protein [Escherichia coli 99.1775]
gi|444574958|gb|ELV51216.1| single-stranded DNA-binding protein [Escherichia coli 99.1793]
gi|444587421|gb|ELV62875.1| single-stranded DNA-binding protein [Escherichia coli 99.1805]
gi|444588259|gb|ELV63644.1| single-stranded DNA-binding protein [Escherichia coli ATCC 700728]
gi|444588734|gb|ELV64098.1| single-stranded DNA-binding protein [Escherichia coli PA11]
gi|444602358|gb|ELV77100.1| single-stranded DNA-binding protein [Escherichia coli PA19]
gi|444602477|gb|ELV77218.1| single-stranded DNA-binding protein [Escherichia coli PA13]
gi|444611531|gb|ELV85858.1| single-stranded DNA-binding protein [Escherichia coli PA2]
gi|444618079|gb|ELV92178.1| single-stranded DNA-binding protein [Escherichia coli PA47]
gi|444619384|gb|ELV93425.1| single-stranded DNA-binding protein [Escherichia coli PA48]
gi|444625645|gb|ELV99465.1| single-stranded DNA-binding protein [Escherichia coli PA8]
gi|444634495|gb|ELW07967.1| single-stranded DNA-binding protein [Escherichia coli 7.1982]
gi|444636119|gb|ELW09522.1| single-stranded DNA-binding protein [Escherichia coli 99.1781]
gi|444641090|gb|ELW14331.1| single-stranded DNA-binding protein [Escherichia coli 99.1762]
gi|444650488|gb|ELW23316.1| single-stranded DNA-binding protein [Escherichia coli PA35]
gi|444656510|gb|ELW29034.1| single-stranded DNA-binding protein [Escherichia coli 3.4880]
gi|444658571|gb|ELW31022.1| single-stranded DNA-binding protein [Escherichia coli 95.0083]
gi|444666179|gb|ELW38257.1| single-stranded DNA-binding protein [Escherichia coli 99.0670]
gi|449313068|gb|EMD03298.1| single-stranded DNA-binding protein, partial [Escherichia coli O08]
gi|449313527|gb|EMD03733.1| single-stranded DNA-binding protein [Escherichia coli S17]
gi|449315515|gb|EMD05657.1| single-stranded DNA-binding protein [Escherichia coli SEPT362]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|417709438|ref|ZP_12358460.1| single-stranded DNA-binding protein [Shigella flexneri VA-6]
gi|420333268|ref|ZP_14834910.1| single-stranded DNA-binding protein [Shigella flexneri K-1770]
gi|332998128|gb|EGK17732.1| single-stranded DNA-binding protein [Shigella flexneri VA-6]
gi|391246766|gb|EIQ06024.1| single-stranded DNA-binding protein [Shigella flexneri K-1770]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|334345916|ref|YP_004554468.1| single-strand binding protein [Sphingobium chlorophenolicum L-1]
gi|334102538|gb|AEG49962.1| single-strand binding protein [Sphingobium chlorophenolicum L-1]
Length = 190
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPEVRSFQNGGKVCNIRIATSETWKDRNSGER--KERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VYVEG ++ R + D
Sbjct: 63 GLAGVAERYLRKGSKVYVEGKLQTRKWQD 91
>gi|126723247|ref|NP_001075600.1| single-stranded DNA-binding protein, mitochondrial precursor
[Oryctolagus cuniculus]
gi|75054474|sp|Q95KK4.1|SSBP_RABIT RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Short=Mt-SSB; Short=MtSSB; Flags: Precursor
gi|13992542|emb|CAC38115.1| single-stranded DNA binding [Oryctolagus cuniculus]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGDNETYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYMDKNN 124
>gi|440232746|ref|YP_007346539.1| single stranded DNA-binding protein [Serratia marcescens FGI94]
gi|440054451|gb|AGB84354.1| single stranded DNA-binding protein [Serratia marcescens FGI94]
Length = 179
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANMTLATSESWRDKATGEQK--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG ++ R + D +G+ + E+ + G+
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGSLQTRKWTDQ-SGQDRYTTEVVVNVGGS 109
>gi|51247433|pdb|1SRU|A Chain A, Crystal Structure Of Full Length E. Coli Ssb Protein
gi|51247434|pdb|1SRU|B Chain B, Crystal Structure Of Full Length E. Coli Ssb Protein
gi|51247435|pdb|1SRU|C Chain C, Crystal Structure Of Full Length E. Coli Ssb Protein
gi|51247436|pdb|1SRU|D Chain D, Crystal Structure Of Full Length E. Coli Ssb Protein
Length = 113
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|402865035|ref|XP_003896744.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 1 [Papio anubis]
gi|402865037|ref|XP_003896745.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 2 [Papio anubis]
gi|402865039|ref|XP_003896746.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 3 [Papio anubis]
gi|402865041|ref|XP_003896747.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 4 [Papio anubis]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124
>gi|330990676|ref|ZP_08314632.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
gi|329762116|gb|EGG78604.1| Single-stranded DNA-binding protein [Gluconacetobacter sp. SXCC-1]
Length = 192
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 84 VHKAIICGKVKDTPVQKILRNGK-TVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
V++AII G + P R G+ + F V T + R G + + QWH + N
Sbjct: 5 VNRAIIIGHLGRDPDLAARREGEGKIASFGVATSETWTDRASGERR--EKTQWHCVVSFN 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR-DGN 191
+ L + ++ K + VYVEG +E R + D G+ + + EI I R DGN
Sbjct: 63 DHLSAVIERRCQKGTLVYVEGHLETRKWTDQ-QGQDRYVTEIIIDRFDGN 111
>gi|261819945|ref|YP_003258051.1| single-stranded DNA-binding protein [Pectobacterium wasabiae
WPP163]
gi|261603958|gb|ACX86444.1| single-strand binding protein [Pectobacterium wasabiae WPP163]
Length = 182
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K + G + P + + NG VT ++ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVTLIGFLGQDPEVRYMPNGNAVTGITMATSETWRDKQTGEEK--ERTEWHRVVIF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDS 173
EI G Y L K S VY+EG ++ R + DS
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLQTRKWQDS 92
>gi|88858653|ref|ZP_01133294.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Pseudoalteromonas tunicata D2]
gi|88818879|gb|EAR28693.1| Single-strand binding protein (SSB) (Helix-destabilizing protein)
[Pseudoalteromonas tunicata D2]
Length = 238
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V S+ T + + G + +WHR+
Sbjct: 3 RGVNKVILVGNLGQDPEVRYMPNGSAVANVSLATAESYKDKNTGQ--MVDKTEWHRVVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI+G Y + K S +YVEG ++ R + D +G+ K EI +
Sbjct: 61 GKLAEIVGEY----VRKGSQIYVEGKLQTRKWTDK-DGQEKYTTEIVV 103
>gi|170742568|ref|YP_001771223.1| single-strand binding protein [Methylobacterium sp. 4-46]
gi|168196842|gb|ACA18789.1| single-strand binding protein [Methylobacterium sp. 4-46]
Length = 171
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + + G + + +WH + ++NE
Sbjct: 5 VNKVILVGNLGRDPEVRRLASGDPVVNLRLATSESWKDKQSGER--KEKTEWHSVVIYNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K S VYVEG ++ R + D +G K E+ ++R
Sbjct: 63 NLARVAEQYLRKGSKVYVEGQLQTRKWQDQ-SGVEKYTTEVVLQR 106
>gi|350560769|ref|ZP_08929609.1| single-strand binding protein [Thioalkalivibrio thiocyanoxidans ARh
4]
gi|349783037|gb|EGZ37320.1| single-strand binding protein [Thioalkalivibrio thiocyanoxidans ARh
4]
Length = 158
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P ++ +G T+T + T + + G K + +WHR+ +
Sbjct: 3 RGVNKVILLGNLGADPEKRETPSGLTITNLRIATSEQWTDKQTGEKR--ENTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
LG A L K S VY+EG I+ R +
Sbjct: 61 GR-LGDIAADYLSKGSQVYIEGRIQTRKWQ 89
>gi|226942807|ref|YP_002797880.1| single-stranded DNA-binding protein [Azotobacter vinelandii DJ]
gi|226717734|gb|ACO76905.1| Single-strand DNA binding protein [Azotobacter vinelandii DJ]
Length = 167
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + L NG VT ++ T + + G + + +WHR+
Sbjct: 3 RGVNKVILIGNVGGDPETRYLPNGNAVTNITLATTDSWKDKQTGQQQ--ERTEWHRVVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S YVEG ++ R + +G+ + EI + +G
Sbjct: 61 GRLAEIAGEY----LRKGSQCYVEGRLQTRKWQGQ-DGQDRYTTEIVVDMNG 107
>gi|417631558|ref|ZP_12281786.1| single-stranded DNA-binding protein [Escherichia coli STEC_MHI813]
gi|345368794|gb|EGX00790.1| single-stranded DNA-binding protein [Escherichia coli STEC_MHI813]
Length = 178
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGG 108
>gi|332243403|ref|XP_003270870.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 1 [Nomascus leucogenys]
gi|332243405|ref|XP_003270871.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 2 [Nomascus leucogenys]
gi|332243407|ref|XP_003270872.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 3 [Nomascus leucogenys]
gi|332243411|ref|XP_003270874.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 5 [Nomascus leucogenys]
gi|441640525|ref|XP_004090292.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Nomascus leucogenys]
gi|441640528|ref|XP_004090293.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Nomascus leucogenys]
gi|441640532|ref|XP_004090294.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
[Nomascus leucogenys]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDISQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124
>gi|444728402|gb|ELW68860.1| Single-stranded DNA-binding protein, mitochondrial, partial [Tupaia
chinensis]
Length = 140
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ + + D+ + WHRI
Sbjct: 20 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGENEVYQMGDVSQKTTWHRI 79
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 80 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 116
>gi|395231235|ref|ZP_10409527.1| single strand DNA-binding protein [Citrobacter sp. A1]
gi|424731189|ref|ZP_18159776.1| single-stranded dna-binding protein [Citrobacter sp. L17]
gi|394715013|gb|EJF20883.1| single strand DNA-binding protein [Citrobacter sp. A1]
gi|422894375|gb|EKU34188.1| single-stranded dna-binding protein [Citrobacter sp. L17]
Length = 174
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGVEKYTTEVVVNVGGT 109
>gi|390448063|ref|ZP_10233686.1| single-strand binding protein [Nitratireductor aquibiodomus RA22]
gi|389666702|gb|EIM78146.1| single-strand binding protein [Nitratireductor aquibiodomus RA22]
Length = 165
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + + +WH + + N+
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDPVVNMRIATSETWRDRQSGER--RERTEWHNVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG+ + E+ +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGQLQTRKWTDQ-NGQERYTTEVVLQK 106
>gi|299133977|ref|ZP_07027171.1| single-strand binding protein [Afipia sp. 1NLS2]
gi|298591813|gb|EFI52014.1| single-strand binding protein [Afipia sp. 1NLS2]
Length = 160
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPDIRRTQDGRPIANLSIATSETWRDKNTGER--KEKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K + VY+EG ++ R + D +G+ K E+ ++
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWQDK-DGKDKYSTEVVLQ 105
>gi|289675520|ref|ZP_06496410.1| single-stranded DNA-binding protein, partial [Pseudomonas syringae
pv. syringae FF5]
Length = 146
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|254361478|ref|ZP_04977617.1| single-stranded DNA-binding protein [Mannheimia haemolytica PHL213]
gi|153092992|gb|EDN74013.1| single-stranded DNA-binding protein [Mannheimia haemolytica PHL213]
Length = 152
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHR-IAVH 141
G++K II G++ + P + + NG T SV T + ++ G K + +WH IA
Sbjct: 3 GINKVIIVGRLGNDPELRTMPNGDTTAKISVATSTEWTDKVSGDKK--QATEWHSIIAFR 60
Query: 142 N--EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N +I+G Y L K S VYVEG + R +
Sbjct: 61 NLADIIGKY----LKKGSQVYVEGKLRTRKW 87
>gi|395765180|ref|ZP_10445796.1| single-strand binding protein [Bartonella sp. DB5-6]
gi|395413033|gb|EJF79512.1| single-strand binding protein [Bartonella sp. DB5-6]
Length = 146
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P +K + +G V F + T + + K +WH I V N
Sbjct: 2 LNKVILIGHLGTNPERKTMTSGGEVVNFRMATTESYTDKATNKK--VDKTEWHSIVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K S VY+EG ++ R + D NG + + E+ +
Sbjct: 60 HLAKIALQYLNKGSKVYIEGRLQTRKWQDK-NGVERYVTEVIL 101
>gi|383647813|ref|ZP_09958219.1| single-strand binding protein [Sphingomonas elodea ATCC 31461]
Length = 193
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH + + +E
Sbjct: 5 VNKVILVGNLGRDPESRAFQNGGKVVELRIATSESWKDRNSGER--KEKTEWHTVKIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L + A + L K S VY+EG ++ R + D
Sbjct: 63 GLANVAERYLRKGSKVYLEGQLQTRKWQD 91
>gi|237728141|ref|ZP_04558622.1| single strand DNA-binding protein [Citrobacter sp. 30_2]
gi|365101891|ref|ZP_09332495.1| single-stranded DNA-binding protein [Citrobacter freundii
4_7_47CFAA]
gi|420376092|ref|ZP_14875882.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|421847466|ref|ZP_16280603.1| single-stranded DNA-binding protein [Citrobacter freundii ATCC 8090
= MTCC 1658]
gi|226910152|gb|EEH96070.1| single strand DNA-binding protein [Citrobacter sp. 30_2]
gi|363646666|gb|EHL85903.1| single-stranded DNA-binding protein [Citrobacter freundii
4_7_47CFAA]
gi|391307128|gb|EIQ64867.1| single-stranded DNA-binding protein [Shigella flexneri 1235-66]
gi|411771120|gb|EKS54833.1| single-stranded DNA-binding protein [Citrobacter freundii ATCC 8090
= MTCC 1658]
gi|455645005|gb|EMF24095.1| single-stranded DNA-binding protein [Citrobacter freundii GTC
09479]
Length = 174
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGVEKYTTEVVVNVGGT 109
>gi|307946893|ref|ZP_07662228.1| single-stranded DNA-binding protein [Roseibium sp. TrichSKD4]
gi|307770557|gb|EFO29783.1| single-stranded DNA-binding protein [Roseibium sp. TrichSKD4]
Length = 187
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + SV T + R G + + +WHR+ + +E
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGRPIANLSVATSESWRDRNSGERR--ERTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 63 GLCKVAEQFLRKGSKVYLEGQLQTRKWQDQ-NGQDRYSTEVVLQ 105
>gi|221134082|ref|ZP_03560387.1| single-strand binding protein [Glaciecola sp. HTCC2999]
Length = 175
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
+GV+K II G + + P K L NG V SV T + + ++ +WHRI ++
Sbjct: 4 KGVNKVIIVGNLGNDPEVKNLPNGGVVANLSVATSESWKDQQGQPQER---TEWHRITMY 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
EI G Y L K S VY+EG ++ R + D
Sbjct: 61 RRLAEIAGEY----LKKGSKVYLEGKLQTRKWQD 90
>gi|187731172|ref|YP_001882751.1| single-stranded DNA-binding protein [Shigella boydii CDC 3083-94]
gi|187428164|gb|ACD07438.1| single-stranded DNA-binding protein [Shigella boydii CDC 3083-94]
Length = 171
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|330446767|ref|ZP_08310418.1| single-stranded DNA-binding protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328490958|dbj|GAA04915.1| single-stranded DNA-binding protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGINKVILVGNLGNDPEVRYMPNGGAVANITIATSESWRDKNTGEQR--EKTEWHRVALY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + + G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQNQ-QGQDQYTTEVVVQ 105
>gi|9954963|pdb|1EYG|A Chain A, Crystal Structure Of Chymotryptic Fragment Of E. Coli Ssb
Bound To Two 35-Mer Single Strand Dnas
gi|9954964|pdb|1EYG|B Chain B, Crystal Structure Of Chymotryptic Fragment Of E. Coli Ssb
Bound To Two 35-Mer Single Strand Dnas
gi|9954965|pdb|1EYG|C Chain C, Crystal Structure Of Chymotryptic Fragment Of E. Coli Ssb
Bound To Two 35-Mer Single Strand Dnas
gi|9954966|pdb|1EYG|D Chain D, Crystal Structure Of Chymotryptic Fragment Of E. Coli Ssb
Bound To Two 35-Mer Single Strand Dnas
Length = 116
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|226227354|ref|YP_002761460.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
gi|226090545|dbj|BAH38990.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
Length = 170
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTG-GLFDQRIVGSKDLPKPVQWHRIAV 140
R ++K I+ G V P + + G V FS+ TG DQ G+K + +WHR V
Sbjct: 3 RSLNKVILIGNVGGDPEVRTVGTGGRVAQFSLATGRNWTDQS--GTK--QEKTEWHRCVV 58
Query: 141 HNEILGS----YAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
N GS K + K +YVEG+IE R + D +G+ + EI +R
Sbjct: 59 WNNSRGSGLADVVEKYVRKGEKIYVEGEIEYRQWQDK-DGQTRYTTEIRVR 108
>gi|406990655|gb|EKE10290.1| hypothetical protein ACD_16C00056G0009 [uncultured bacterium]
Length = 152
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P ++ + G V ++ T + R +++ + +WHR+ + NE
Sbjct: 5 INKVILVGNLGKDPEVRMTQEGVKVVNLALATSEQW--RDKDTQERKERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
+ A K L K S VY+EG ++ R + D G+ + E+ + R
Sbjct: 63 RIADVADKYLRKGSKVYIEGQLQTRKWTDQ-EGKERYTTEVVVPR 106
>gi|343500891|ref|ZP_08738777.1| single-stranded DNA-binding protein [Vibrio tubiashii ATCC 19109]
gi|418481664|ref|ZP_13050692.1| single-stranded DNA-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
gi|342819606|gb|EGU54446.1| single-stranded DNA-binding protein [Vibrio tubiashii ATCC 19109]
gi|384570730|gb|EIF01288.1| single-stranded DNA-binding protein [Vibrio tubiashii NCIMB 1337 =
ATCC 19106]
Length = 194
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGVNKVILVGNLGSDPEVRFMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQT-GQDRYTTEVVVQ 105
>gi|265984164|ref|ZP_06096899.1| single-stranded DNA-binding protein [Brucella sp. 83/13]
gi|306838161|ref|ZP_07471017.1| single-strand binding protein [Brucella sp. NF 2653]
gi|264662756|gb|EEZ33017.1| single-stranded DNA-binding protein [Brucella sp. 83/13]
gi|306406751|gb|EFM62974.1| single-strand binding protein [Brucella sp. NF 2653]
Length = 169
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDMVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + E+ +++
Sbjct: 63 NLAKIAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEVVLQK 106
>gi|443644296|ref|ZP_21128146.1| Putative prophage PSSB64-02, single-stranded DNA-binding protein
[Pseudomonas syringae pv. syringae B64]
gi|443284313|gb|ELS43318.1| Putative prophage PSSB64-02, single-stranded DNA-binding protein
[Pseudomonas syringae pv. syringae B64]
Length = 164
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPDVRYLPNGNAVTNLSLATSEQWTDKQSGQK--VEKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|91977225|ref|YP_569884.1| single-stranded DNA-binding protein [Rhodopseudomonas palustris
BisB5]
gi|91683681|gb|ABE39983.1| single-strand binding protein [Rhodopseudomonas palustris BisB5]
Length = 169
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + + T + R G + + +WHR+ + +E
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLRIATSETWRDRASGERK--EKTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L A + L K S +Y+EG ++ R + D E
Sbjct: 63 GLCKIAEQYLKKGSKIYLEGQLQTRKWTDQSGAE 96
>gi|197099264|ref|NP_001127238.1| single-stranded DNA-binding protein, mitochondrial precursor [Pongo
abelii]
gi|75055196|sp|Q5RDQ0.1|SSBP_PONAB RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Short=Mt-SSB; Short=MtSSB; Flags: Precursor
gi|55726689|emb|CAH90107.1| hypothetical protein [Pongo abelii]
Length = 148
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 28 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDISQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124
>gi|417615730|ref|ZP_12266175.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
gi|345356877|gb|EGW89077.1| single-stranded DNA-binding protein [Escherichia coli STEC_EH250]
Length = 178
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 109
>gi|290476871|ref|YP_003469782.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
gi|289176215|emb|CBJ83020.1| ssDNA-binding protein controls activity of RecBCD nuclease
[Xenorhabdus bovienii SS-2004]
Length = 175
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTG--EMREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L A + L K S VY+EG ++ R + D G+ + E+ +
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGSLQTRKWQDQ-GGQERYTTEVVV 104
>gi|260775602|ref|ZP_05884499.1| single-stranded DNA-binding protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608783|gb|EEX34948.1| single-stranded DNA-binding protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 182
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+++
Sbjct: 4 RGVNKVILVGNLGSDPEVRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVSLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D NG+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQ 105
>gi|153802217|ref|ZP_01956803.1| single-strand binding protein [Vibrio cholerae MZO-3]
gi|153825660|ref|ZP_01978327.1| single-strand binding protein [Vibrio cholerae MZO-2]
gi|153829318|ref|ZP_01981985.1| single-strand binding protein [Vibrio cholerae 623-39]
gi|254291302|ref|ZP_04962096.1| single-strand binding protein [Vibrio cholerae AM-19226]
gi|262191515|ref|ZP_06049699.1| single-stranded DNA-binding protein [Vibrio cholerae CT 5369-93]
gi|384423702|ref|YP_005633060.1| ssDNA-binding protein [Vibrio cholerae LMA3984-4]
gi|417819280|ref|ZP_12465897.1| single-stranded DNA-binding protein [Vibrio cholerae HE39]
gi|417823533|ref|ZP_12470125.1| single-stranded DNA-binding protein [Vibrio cholerae HE48]
gi|419828972|ref|ZP_14352461.1| single-stranded DNA-binding family protein [Vibrio cholerae HC-1A2]
gi|419831752|ref|ZP_14355219.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-61A2]
gi|419835343|ref|ZP_14358788.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46B1]
gi|421342177|ref|ZP_15792584.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43B1]
gi|421350256|ref|ZP_15800622.1| single-stranded DNA-binding protein [Vibrio cholerae HE-25]
gi|422916134|ref|ZP_16950475.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02A1]
gi|422921648|ref|ZP_16954859.1| single-stranded DNA-binding protein [Vibrio cholerae BJG-01]
gi|423733704|ref|ZP_17706920.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-41B1]
gi|423816094|ref|ZP_17715080.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-55C2]
gi|423848157|ref|ZP_17718866.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-59A1]
gi|423878735|ref|ZP_17722473.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-60A1]
gi|423946433|ref|ZP_17733341.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-40]
gi|423975591|ref|ZP_17736889.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-46]
gi|423996554|ref|ZP_17739820.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02C1]
gi|424007988|ref|ZP_17750938.1| single-stranded DNA-binding protein [Vibrio cholerae HC-44C1]
gi|424015252|ref|ZP_17755102.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55B2]
gi|424018367|ref|ZP_17758169.1| single-stranded DNA-binding protein [Vibrio cholerae HC-59B1]
gi|424623740|ref|ZP_18062220.1| single-stranded DNA-binding protein [Vibrio cholerae HC-50A1]
gi|424628315|ref|ZP_18066624.1| single-stranded DNA-binding protein [Vibrio cholerae HC-51A1]
gi|424632268|ref|ZP_18070387.1| single-stranded DNA-binding protein [Vibrio cholerae HC-52A1]
gi|424635356|ref|ZP_18073380.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55A1]
gi|424639148|ref|ZP_18077048.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A1]
gi|424647431|ref|ZP_18085111.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A1]
gi|429886285|ref|ZP_19367845.1| Single-stranded DNA-binding protein [Vibrio cholerae PS15]
gi|443526286|ref|ZP_21092372.1| single-stranded DNA-binding protein [Vibrio cholerae HC-78A1]
gi|124122241|gb|EAY40984.1| single-strand binding protein [Vibrio cholerae MZO-3]
gi|148875218|gb|EDL73353.1| single-strand binding protein [Vibrio cholerae 623-39]
gi|149740690|gb|EDM54797.1| single-strand binding protein [Vibrio cholerae MZO-2]
gi|150422758|gb|EDN14711.1| single-strand binding protein [Vibrio cholerae AM-19226]
gi|262032613|gb|EEY51167.1| single-stranded DNA-binding protein [Vibrio cholerae CT 5369-93]
gi|327483255|gb|AEA77662.1| Single-stranded DNA-binding protein [Vibrio cholerae LMA3984-4]
gi|340041136|gb|EGR02103.1| single-stranded DNA-binding protein [Vibrio cholerae HE39]
gi|340048162|gb|EGR09084.1| single-stranded DNA-binding protein [Vibrio cholerae HE48]
gi|341640967|gb|EGS65541.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02A1]
gi|341648363|gb|EGS72426.1| single-stranded DNA-binding protein [Vibrio cholerae BJG-01]
gi|395945680|gb|EJH56345.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43B1]
gi|395954378|gb|EJH64988.1| single-stranded DNA-binding protein [Vibrio cholerae HE-25]
gi|408016310|gb|EKG53860.1| single-stranded DNA-binding protein [Vibrio cholerae HC-50A1]
gi|408021623|gb|EKG58864.1| single-stranded DNA-binding protein [Vibrio cholerae HC-52A1]
gi|408027735|gb|EKG64687.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A1]
gi|408027822|gb|EKG64768.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55A1]
gi|408037226|gb|EKG73625.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A1]
gi|408059296|gb|EKG94063.1| single-stranded DNA-binding protein [Vibrio cholerae HC-51A1]
gi|408622161|gb|EKK95149.1| single-stranded DNA-binding family protein [Vibrio cholerae HC-1A2]
gi|408631861|gb|EKL04377.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-41B1]
gi|408636765|gb|EKL08887.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-55C2]
gi|408644180|gb|EKL15881.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-60A1]
gi|408645283|gb|EKL16939.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-59A1]
gi|408652159|gb|EKL23384.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-61A2]
gi|408662136|gb|EKL33108.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-40]
gi|408666219|gb|EKL37015.1| single-stranded DNA-binding family protein [Vibrio cholerae HE-46]
gi|408854831|gb|EKL94578.1| single-stranded DNA-binding protein [Vibrio cholerae HC-02C1]
gi|408858756|gb|EKL98426.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46B1]
gi|408862154|gb|EKM01696.1| single-stranded DNA-binding protein [Vibrio cholerae HC-55B2]
gi|408866275|gb|EKM05658.1| single-stranded DNA-binding protein [Vibrio cholerae HC-44C1]
gi|408870438|gb|EKM09716.1| single-stranded DNA-binding protein [Vibrio cholerae HC-59B1]
gi|429226802|gb|EKY32874.1| Single-stranded DNA-binding protein [Vibrio cholerae PS15]
gi|443455370|gb|ELT19151.1| single-stranded DNA-binding protein [Vibrio cholerae HC-78A1]
Length = 177
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|190571216|ref|YP_001975574.1| single-strand binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018616|ref|ZP_03334424.1| single-strand binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|353328157|ref|ZP_08970484.1| single-strand binding protein [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
gi|373450565|ref|ZP_09542546.1| Single-stranded DNA-binding protein [Wolbachia pipientis wAlbB]
gi|190357488|emb|CAQ54923.1| single-strand binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995567|gb|EEB56207.1| single-strand binding protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|371932233|emb|CCE77557.1| Single-stranded DNA-binding protein [Wolbachia pipientis wAlbB]
Length = 160
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + +NGK + FS+ T + + G++ + +WH I + +E
Sbjct: 6 INKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKFSGTR--SEKTEWHNIVIFSE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L K S VYVEG + R + D NG + E+ +
Sbjct: 64 GLVKIVKDFARKGSKVYVEGSLRTRKWTDQ-NGSERYTTEVVL 105
>gi|356582469|ref|NP_001239208.1| single-stranded DNA-binding protein, mitochondrial [Canis lupus
familiaris]
gi|359321657|ref|XP_003639657.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
[Canis lupus familiaris]
Length = 148
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Query: 54 VDDVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSV 113
V VF FV + E+ V R +++ + G+V PV + + VTIFS+
Sbjct: 6 VLQVFHQFVRRESEIASSLVLER------SLNRVQLLGRVGQDPVMRQVEGKNPVTIFSL 59
Query: 114 GTGGLF---DQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
T ++ + D+ + WHRI+V L A + + K S +YVEG ++ Y
Sbjct: 60 ATNEMWRSGESETYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEY 119
Query: 171 NDSIN 175
D N
Sbjct: 120 TDKNN 124
>gi|49188562|ref|YP_025660.1| single-stranded binding protein [Pseudomonas syringae pv.
maculicola]
gi|422649057|ref|ZP_16712170.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|47525145|gb|AAT35159.1| single-stranded binding protein [Pseudomonas syringae pv.
maculicola]
gi|330962584|gb|EGH62844.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 186
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQK--VEKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKIAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|414173653|ref|ZP_11428280.1| single-stranded DNA-binding protein [Afipia broomeae ATCC 49717]
gi|410890287|gb|EKS38086.1| single-stranded DNA-binding protein [Afipia broomeae ATCC 49717]
Length = 161
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + S+ T + + G + + +WHR+ + +E
Sbjct: 5 VNKVILVGNLGADPEIKRTQDGRPIANLSIATSDTWRDKNSGER--KEKTEWHRVVIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG ++ R + D
Sbjct: 63 GLCKIAEQYLKKGSKVYIEGQLQTRKWQD 91
>gi|423118079|ref|ZP_17105763.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5246]
gi|376402412|gb|EHT15006.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5246]
Length = 175
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K EI + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEIVVNVGGT 109
>gi|375266787|ref|YP_005024230.1| single-stranded DNA-binding protein [Vibrio sp. EJY3]
gi|369842107|gb|AEX23251.1| single-stranded DNA-binding protein [Vibrio sp. EJY3]
Length = 179
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSDSWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|38257082|ref|NP_940736.1| single-strand DNA-binding protein [Pseudomonas syringae pv.
syringae]
gi|37723859|gb|AAR02185.1| Ssb [Pseudomonas syringae pv. syringae]
Length = 201
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|395651537|ref|ZP_10439387.1| single-stranded DNA-binding protein [Pseudomonas extremaustralis
14-3 substr. 14-3b]
Length = 171
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+ +
Sbjct: 3 RGVNKVILVGTCGQDPEVRFLPNGNAVTNLSLATSEQWTDKQTGQK--VEKTEWHRVVMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y + K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----VRKGSQVYIEGKLQTREWE 89
>gi|226227220|ref|YP_002761326.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
gi|226090411|dbj|BAH38856.1| single-strand binding protein [Gemmatimonas aurantiaca T-27]
Length = 155
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
R + AI+ G V P + + G V FS+ TG + +D QWHR
Sbjct: 3 RSKNLAILIGNVGQDPEVRTVGTGGRVAQFSLATGKQWTDAQGNKQD---ATQWHRCVAW 59
Query: 142 NEILGSYAVKQLV-----KNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
N+ G Y + +V K +YVEG+IE R + D +G+ + EI +R
Sbjct: 60 NQ--GKYTLADIVEKYVRKGEKIYVEGEIEYRQWQDK-DGQTRYTTEIRVR 107
>gi|153215386|ref|ZP_01949984.1| single-strand binding protein [Vibrio cholerae 1587]
gi|124114757|gb|EAY33577.1| single-strand binding protein [Vibrio cholerae 1587]
Length = 177
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|443468490|ref|ZP_21058702.1| Single-stranded DNA-binding protein [Pseudomonas pseudoalcaligenes
KF707]
gi|442897652|gb|ELS24531.1| Single-stranded DNA-binding protein [Pseudomonas pseudoalcaligenes
KF707]
Length = 161
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + L NG VT ++ T + + G + + +WHR+
Sbjct: 3 RGVNKVILVGNVGGDPETRYLPNGNAVTNITLATSESWKDKQTGQQQ--ERTEWHRVVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VYVEG + R +
Sbjct: 61 GRLAEIAGEY----LRKGSQVYVEGSLRTREW 88
>gi|425183132|ref|ZP_18580804.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
gi|408093872|gb|EKH26920.1| single-stranded DNA-binding protein [Escherichia coli FRIK1999]
Length = 178
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGG 108
>gi|144899945|emb|CAM76809.1| Single-strand binding protein/Primosomal replication protein n
[Magnetospirillum gryphiswaldense MSR-1]
Length = 185
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G + ++ T + R G + + +WHR+ + N
Sbjct: 5 VNKVILVGNLGRDPEVRTAQDGSKIVNLNIATSESWKDRSSGER--REKTEWHRVVIFNP 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K SSVY+EG ++ R + D G K E+ I R
Sbjct: 63 NLADVAERFLRKGSSVYIEGALQTRKWTDQ-QGVEKYSTEVVIGR 106
>gi|422024005|ref|ZP_16370506.1| single-stranded DNA-binding protein [Providencia sneebia DSM 19967]
gi|414091405|gb|EKT53090.1| single-stranded DNA-binding protein [Providencia sneebia DSM 19967]
Length = 173
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTG--EMREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG ++ R + D +G+ + E+ + G+
Sbjct: 62 GK-LAEVAGEYLKKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNIGGS 109
>gi|422016926|ref|ZP_16363502.1| single-stranded DNA-binding protein [Providencia burhodogranariea
DSM 19968]
gi|414091356|gb|EKT53042.1| single-stranded DNA-binding protein [Providencia burhodogranariea
DSM 19968]
Length = 179
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTG--EMREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A + L K S VY+EG ++ R + D
Sbjct: 62 GK-LAEVAGEYLKKGSQVYIEGSLQTRKWQD 91
>gi|410689629|ref|YP_006963356.1| Single-stranded DNA-binding protein [Pseudomonas syringae]
gi|389596390|gb|AFK89155.1| Single-stranded DNA-binding protein [Pseudomonas syringae]
Length = 201
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPECRYLPNGTPVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LHKGSQVYIEGKLQTREWE 89
>gi|261209951|ref|ZP_05924251.1| single-stranded DNA-binding protein [Vibrio sp. RC341]
gi|260841016|gb|EEX67548.1| single-stranded DNA-binding protein [Vibrio sp. RC341]
Length = 177
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKTTGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|116515274|ref|YP_802903.1| hypothetical protein BCc_357 [Buchnera aphidicola BCc]
gi|116257128|gb|ABJ90810.1| single-strand DNA-binding protein [Buchnera aphidicola BCc]
Length = 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG TV ++ T + + G + +WHR+ +
Sbjct: 4 RGVNKVILIGYLGQDPDIRYMPNGGTVVNITLATSDTWKDKHTGEN--KEKTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S VY+EG ++ R + D NG + EI + G
Sbjct: 62 GKIAEISGQY----LKKGSQVYIEGSLQTRKWKDQ-NGLDRYTTEIVVSVTG 108
>gi|15640424|ref|NP_230051.1| single-stranded DNA-binding protein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121587597|ref|ZP_01677362.1| single-strand binding protein [Vibrio cholerae 2740-80]
gi|121727262|ref|ZP_01680421.1| single-strand binding protein [Vibrio cholerae V52]
gi|147673244|ref|YP_001218665.1| single-stranded DNA-binding protein [Vibrio cholerae O395]
gi|153818249|ref|ZP_01970916.1| single-strand binding protein [Vibrio cholerae NCTC 8457]
gi|153822251|ref|ZP_01974918.1| single-strand binding protein [Vibrio cholerae B33]
gi|227080608|ref|YP_002809159.1| single-stranded DNA-binding protein [Vibrio cholerae M66-2]
gi|227116802|ref|YP_002818698.1| single-strand binding protein [Vibrio cholerae O395]
gi|255743783|ref|ZP_05417740.1| single-stranded DNA-binding protein [Vibrio cholera CIRS 101]
gi|262153604|ref|ZP_06028732.1| single-stranded DNA-binding protein [Vibrio cholerae INDRE 91/1]
gi|262167638|ref|ZP_06035342.1| single-stranded DNA-binding protein [Vibrio cholerae RC27]
gi|360037036|ref|YP_004938799.1| single-stranded DNA-binding protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|379740272|ref|YP_005332241.1| single-stranded DNA-binding protein [Vibrio cholerae IEC224]
gi|417812380|ref|ZP_12459040.1| single-stranded DNA-binding protein [Vibrio cholerae HC-49A2]
gi|417815244|ref|ZP_12461878.1| single-stranded DNA-binding protein [Vibrio cholerae HCUF01]
gi|418331103|ref|ZP_12942053.1| single-stranded DNA-binding protein [Vibrio cholerae HC-06A1]
gi|418336262|ref|ZP_12945161.1| single-stranded DNA-binding protein [Vibrio cholerae HC-23A1]
gi|418342642|ref|ZP_12949443.1| single-stranded DNA-binding protein [Vibrio cholerae HC-28A1]
gi|418347806|ref|ZP_12952542.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43A1]
gi|418354311|ref|ZP_12957035.1| single-stranded DNA-binding protein [Vibrio cholerae HC-61A1]
gi|419824868|ref|ZP_14348375.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1033(6)]
gi|421315772|ref|ZP_15766344.1| single-stranded DNA-binding protein [Vibrio cholerae CP1032(5)]
gi|421319184|ref|ZP_15769743.1| single-stranded DNA-binding protein [Vibrio cholerae CP1038(11)]
gi|421323218|ref|ZP_15773747.1| single-stranded DNA-binding protein [Vibrio cholerae CP1041(14)]
gi|421327625|ref|ZP_15778141.1| single-stranded DNA-binding protein [Vibrio cholerae CP1042(15)]
gi|421330624|ref|ZP_15781106.1| single-stranded DNA-binding protein [Vibrio cholerae CP1046(19)]
gi|421334220|ref|ZP_15784690.1| single-stranded DNA-binding protein [Vibrio cholerae CP1048(21)]
gi|421338120|ref|ZP_15788559.1| single-stranded DNA-binding protein [Vibrio cholerae HC-20A2]
gi|421345722|ref|ZP_15796107.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46A1]
gi|421353205|ref|ZP_15803539.1| single-stranded DNA-binding protein [Vibrio cholerae HE-45]
gi|422305824|ref|ZP_16393011.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1035(8)]
gi|422901236|ref|ZP_16936614.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48A1]
gi|422905420|ref|ZP_16940278.1| single-stranded DNA-binding protein [Vibrio cholerae HC-70A1]
gi|422912140|ref|ZP_16946670.1| single-stranded DNA-binding protein [Vibrio cholerae HFU-02]
gi|422924620|ref|ZP_16957658.1| single-stranded DNA-binding protein [Vibrio cholerae HC-38A1]
gi|423143667|ref|ZP_17131285.1| single-stranded DNA-binding protein [Vibrio cholerae HC-19A1]
gi|423148651|ref|ZP_17136012.1| single-stranded DNA-binding protein [Vibrio cholerae HC-21A1]
gi|423152441|ref|ZP_17139643.1| single-stranded DNA-binding protein [Vibrio cholerae HC-22A1]
gi|423155225|ref|ZP_17142364.1| single-stranded DNA-binding protein [Vibrio cholerae HC-32A1]
gi|423159084|ref|ZP_17146058.1| single-stranded DNA-binding protein [Vibrio cholerae HC-33A2]
gi|423163761|ref|ZP_17150558.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48B2]
gi|423747003|ref|ZP_17711291.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-50A2]
gi|423891613|ref|ZP_17725305.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-62A1]
gi|423926389|ref|ZP_17729922.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-77A1]
gi|424000944|ref|ZP_17744037.1| single-stranded DNA-binding protein [Vibrio cholerae HC-17A2]
gi|424005104|ref|ZP_17748092.1| single-stranded DNA-binding protein [Vibrio cholerae HC-37A1]
gi|424022899|ref|ZP_17762566.1| single-stranded DNA-binding protein [Vibrio cholerae HC-62B1]
gi|424025917|ref|ZP_17765537.1| single-stranded DNA-binding protein [Vibrio cholerae HC-69A1]
gi|424585298|ref|ZP_18024894.1| single-stranded DNA-binding protein [Vibrio cholerae CP1030(3)]
gi|424589674|ref|ZP_18029121.1| single-stranded DNA-binding protein [Vibrio cholerae CP1037(10)]
gi|424593919|ref|ZP_18033262.1| single-stranded DNA-binding protein [Vibrio cholerae CP1040(13)]
gi|424597853|ref|ZP_18037055.1| single-stranded DNA-binding protein [Vibrio Cholerae CP1044(17)]
gi|424600618|ref|ZP_18039777.1| single-stranded DNA-binding protein [Vibrio cholerae CP1047(20)]
gi|424605534|ref|ZP_18044502.1| single-stranded DNA-binding protein [Vibrio cholerae CP1050(23)]
gi|424609251|ref|ZP_18048114.1| single-stranded DNA-binding protein [Vibrio cholerae HC-39A1]
gi|424612169|ref|ZP_18050980.1| single-stranded DNA-binding protein [Vibrio cholerae HC-41A1]
gi|424616047|ref|ZP_18054742.1| single-stranded DNA-binding protein [Vibrio cholerae HC-42A1]
gi|424620807|ref|ZP_18059338.1| single-stranded DNA-binding protein [Vibrio cholerae HC-47A1]
gi|424643627|ref|ZP_18081385.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A2]
gi|424651547|ref|ZP_18089075.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A2]
gi|424655495|ref|ZP_18092801.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A2]
gi|440708602|ref|ZP_20889264.1| single-stranded DNA-binding protein [Vibrio cholerae 4260B]
gi|443502446|ref|ZP_21069439.1| single-stranded DNA-binding protein [Vibrio cholerae HC-64A1]
gi|443506353|ref|ZP_21073151.1| single-stranded DNA-binding protein [Vibrio cholerae HC-65A1]
gi|443510189|ref|ZP_21076861.1| single-stranded DNA-binding protein [Vibrio cholerae HC-67A1]
gi|443514025|ref|ZP_21080570.1| single-stranded DNA-binding protein [Vibrio cholerae HC-68A1]
gi|443517838|ref|ZP_21084261.1| single-stranded DNA-binding protein [Vibrio cholerae HC-71A1]
gi|443522420|ref|ZP_21088670.1| single-stranded DNA-binding protein [Vibrio cholerae HC-72A2]
gi|443530324|ref|ZP_21096340.1| single-stranded DNA-binding protein [Vibrio cholerae HC-7A1]
gi|443537679|ref|ZP_21103536.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A1]
gi|449054373|ref|ZP_21733041.1| Single-stranded DNA-binding protein [Vibrio cholerae O1 str. Inaba
G4222]
gi|37999465|sp|Q9KUW2.1|SSB_VIBCH RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|9654818|gb|AAF93570.1| single-strand binding protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548170|gb|EAX58242.1| single-strand binding protein [Vibrio cholerae 2740-80]
gi|121630381|gb|EAX62776.1| single-strand binding protein [Vibrio cholerae V52]
gi|126511208|gb|EAZ73802.1| single-strand binding protein [Vibrio cholerae NCTC 8457]
gi|126520207|gb|EAZ77430.1| single-strand binding protein [Vibrio cholerae B33]
gi|146315127|gb|ABQ19666.1| single-strand binding protein [Vibrio cholerae O395]
gi|227008496|gb|ACP04708.1| single-strand binding protein [Vibrio cholerae M66-2]
gi|227012252|gb|ACP08462.1| single-strand binding protein [Vibrio cholerae O395]
gi|255738532|gb|EET93920.1| single-stranded DNA-binding protein [Vibrio cholera CIRS 101]
gi|262023974|gb|EEY42671.1| single-stranded DNA-binding protein [Vibrio cholerae RC27]
gi|262030631|gb|EEY49267.1| single-stranded DNA-binding protein [Vibrio cholerae INDRE 91/1]
gi|340043230|gb|EGR04189.1| single-stranded DNA-binding protein [Vibrio cholerae HCUF01]
gi|340043760|gb|EGR04717.1| single-stranded DNA-binding protein [Vibrio cholerae HC-49A2]
gi|341625752|gb|EGS51179.1| single-stranded DNA-binding protein [Vibrio cholerae HC-70A1]
gi|341627124|gb|EGS52450.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48A1]
gi|341641327|gb|EGS65883.1| single-stranded DNA-binding protein [Vibrio cholerae HFU-02]
gi|341648678|gb|EGS72719.1| single-stranded DNA-binding protein [Vibrio cholerae HC-38A1]
gi|356421593|gb|EHH75087.1| single-stranded DNA-binding protein [Vibrio cholerae HC-06A1]
gi|356422059|gb|EHH75543.1| single-stranded DNA-binding protein [Vibrio cholerae HC-21A1]
gi|356426866|gb|EHH80149.1| single-stranded DNA-binding protein [Vibrio cholerae HC-19A1]
gi|356433043|gb|EHH86236.1| single-stranded DNA-binding protein [Vibrio cholerae HC-23A1]
gi|356434813|gb|EHH87980.1| single-stranded DNA-binding protein [Vibrio cholerae HC-22A1]
gi|356438103|gb|EHH91154.1| single-stranded DNA-binding protein [Vibrio cholerae HC-28A1]
gi|356443487|gb|EHH96308.1| single-stranded DNA-binding protein [Vibrio cholerae HC-32A1]
gi|356447917|gb|EHI00702.1| single-stranded DNA-binding protein [Vibrio cholerae HC-43A1]
gi|356450533|gb|EHI03252.1| single-stranded DNA-binding protein [Vibrio cholerae HC-33A2]
gi|356454087|gb|EHI06742.1| single-stranded DNA-binding protein [Vibrio cholerae HC-61A1]
gi|356456547|gb|EHI09144.1| single-stranded DNA-binding protein [Vibrio cholerae HC-48B2]
gi|356648190|gb|AET28245.1| single-stranded DNA-binding protein [Vibrio cholerae O1 str.
2010EL-1786]
gi|378793782|gb|AFC57253.1| single-stranded DNA-binding protein [Vibrio cholerae IEC224]
gi|395922513|gb|EJH33329.1| single-stranded DNA-binding protein [Vibrio cholerae CP1032(5)]
gi|395923063|gb|EJH33875.1| single-stranded DNA-binding protein [Vibrio cholerae CP1041(14)]
gi|395925509|gb|EJH36306.1| single-stranded DNA-binding protein [Vibrio cholerae CP1038(11)]
gi|395931359|gb|EJH42104.1| single-stranded DNA-binding protein [Vibrio cholerae CP1042(15)]
gi|395934477|gb|EJH45215.1| single-stranded DNA-binding protein [Vibrio cholerae CP1046(19)]
gi|395937750|gb|EJH48461.1| single-stranded DNA-binding protein [Vibrio cholerae CP1048(21)]
gi|395946483|gb|EJH57146.1| single-stranded DNA-binding protein [Vibrio cholerae HC-20A2]
gi|395948391|gb|EJH59041.1| single-stranded DNA-binding protein [Vibrio cholerae HC-46A1]
gi|395954978|gb|EJH65583.1| single-stranded DNA-binding protein [Vibrio cholerae HE-45]
gi|395964044|gb|EJH74286.1| single-stranded DNA-binding protein [Vibrio cholerae HC-56A2]
gi|395964277|gb|EJH74510.1| single-stranded DNA-binding protein [Vibrio cholerae HC-57A2]
gi|395967165|gb|EJH77265.1| single-stranded DNA-binding protein [Vibrio cholerae HC-42A1]
gi|395975726|gb|EJH85203.1| single-stranded DNA-binding protein [Vibrio cholerae HC-47A1]
gi|395977912|gb|EJH87304.1| single-stranded DNA-binding protein [Vibrio cholerae CP1030(3)]
gi|395979345|gb|EJH88697.1| single-stranded DNA-binding protein [Vibrio cholerae CP1047(20)]
gi|408010147|gb|EKG48019.1| single-stranded DNA-binding protein [Vibrio cholerae HC-39A1]
gi|408017079|gb|EKG54599.1| single-stranded DNA-binding protein [Vibrio cholerae HC-41A1]
gi|408036639|gb|EKG73061.1| single-stranded DNA-binding protein [Vibrio cholerae CP1037(10)]
gi|408037561|gb|EKG73949.1| single-stranded DNA-binding protein [Vibrio cholerae CP1040(13)]
gi|408045052|gb|EKG80921.1| single-stranded DNA-binding protein [Vibrio Cholerae CP1044(17)]
gi|408046960|gb|EKG82618.1| single-stranded DNA-binding protein [Vibrio cholerae CP1050(23)]
gi|408057596|gb|EKG92436.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A2]
gi|408611892|gb|EKK85248.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1033(6)]
gi|408628016|gb|EKL00796.1| single-stranded DNA-binding family protein [Vibrio cholerae
CP1035(8)]
gi|408643022|gb|EKL14762.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-50A2]
gi|408659005|gb|EKL30061.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-77A1]
gi|408660041|gb|EKL31071.1| single-stranded DNA-binding family protein [Vibrio cholerae
HC-62A1]
gi|408849312|gb|EKL89334.1| single-stranded DNA-binding protein [Vibrio cholerae HC-37A1]
gi|408849807|gb|EKL89810.1| single-stranded DNA-binding protein [Vibrio cholerae HC-17A2]
gi|408874533|gb|EKM13703.1| single-stranded DNA-binding protein [Vibrio cholerae HC-62B1]
gi|408881482|gb|EKM20363.1| single-stranded DNA-binding protein [Vibrio cholerae HC-69A1]
gi|439975869|gb|ELP51971.1| single-stranded DNA-binding protein [Vibrio cholerae 4260B]
gi|443433146|gb|ELS75663.1| single-stranded DNA-binding protein [Vibrio cholerae HC-64A1]
gi|443436977|gb|ELS83086.1| single-stranded DNA-binding protein [Vibrio cholerae HC-65A1]
gi|443440763|gb|ELS90444.1| single-stranded DNA-binding protein [Vibrio cholerae HC-67A1]
gi|443444630|gb|ELS97898.1| single-stranded DNA-binding protein [Vibrio cholerae HC-68A1]
gi|443448468|gb|ELT05097.1| single-stranded DNA-binding protein [Vibrio cholerae HC-71A1]
gi|443451489|gb|ELT11743.1| single-stranded DNA-binding protein [Vibrio cholerae HC-72A2]
gi|443458525|gb|ELT25920.1| single-stranded DNA-binding protein [Vibrio cholerae HC-7A1]
gi|443466504|gb|ELT41161.1| single-stranded DNA-binding protein [Vibrio cholerae HC-81A1]
gi|448266166|gb|EMB03396.1| Single-stranded DNA-binding protein [Vibrio cholerae O1 str. Inaba
G4222]
Length = 177
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|392549064|ref|ZP_10296201.1| single-stranded DNA-binding protein [Pseudoalteromonas rubra ATCC
29570]
Length = 238
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V S+ T + + G + + +WHR+ +
Sbjct: 3 RGVNKVILVGNLGQDPEVRYMPNGNGVANISIATTDSWKDKNTGQ--MQERTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG ++ R + D G+ + EI + G
Sbjct: 61 GK-LAEVAGEYLRKGSQVYIEGRLQTRKWTDQ-GGQERYTTEIVVDMGG 107
>gi|387890917|ref|YP_006321215.1| single-strand binding protein [Escherichia blattae DSM 4481]
gi|414595775|ref|ZP_11445386.1| single-stranded DNA-binding protein [Escherichia blattae NBRC
105725]
gi|386925750|gb|AFJ48704.1| single-strand binding protein [Escherichia blattae DSM 4481]
gi|403193246|dbj|GAB83038.1| single-stranded DNA-binding protein [Escherichia blattae NBRC
105725]
Length = 179
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWQDQ-SGQERYTTEVVVNVGGT 109
>gi|416019927|ref|ZP_11566550.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320321622|gb|EFW77726.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. B076]
Length = 201
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|229512671|ref|ZP_04402140.1| single-stranded DNA-binding protein [Vibrio cholerae TMA 21]
gi|229525090|ref|ZP_04414495.1| single-stranded DNA-binding protein [Vibrio cholerae bv. albensis
VL426]
gi|229530242|ref|ZP_04419630.1| single-stranded DNA-binding protein [Vibrio cholerae 12129(1)]
gi|297580535|ref|ZP_06942461.1| single strand DNA-binding protein [Vibrio cholerae RC385]
gi|229332015|gb|EEN97503.1| single-stranded DNA-binding protein [Vibrio cholerae 12129(1)]
gi|229338671|gb|EEO03688.1| single-stranded DNA-binding protein [Vibrio cholerae bv. albensis
VL426]
gi|229350348|gb|EEO15299.1| single-stranded DNA-binding protein [Vibrio cholerae TMA 21]
gi|297534951|gb|EFH73786.1| single strand DNA-binding protein [Vibrio cholerae RC385]
Length = 183
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 10 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 67
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 68 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 111
>gi|332187745|ref|ZP_08389480.1| single-strand binding family protein [Sphingomonas sp. S17]
gi|332012311|gb|EGI54381.1| single-strand binding family protein [Sphingomonas sp. S17]
Length = 202
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH + + NE
Sbjct: 5 VNKVILVGNLGRDPESRSFQNGGKVVELRIATSESWKDRNSGER--KEKTEWHTVKIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L + A + L K S VY+EG + R + D
Sbjct: 63 GLANVAERFLRKGSKVYIEGALTTRKWQD 91
>gi|261493752|ref|ZP_05990269.1| bifunctional single-stranded DNA-binding protein/integrase
[Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261310597|gb|EEY11783.1| bifunctional single-stranded DNA-binding protein/integrase
[Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 152
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHR-IAVH 141
G++K II G++ + P + + NG +V SV T + ++ G K + +WH IA
Sbjct: 3 GINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDKVSGDKK--QATEWHSIIAFR 60
Query: 142 N--EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N +I+G Y L K S VYVEG + R +
Sbjct: 61 NLADIIGKY----LKKGSQVYVEGKLRTRKW 87
>gi|163802888|ref|ZP_02196776.1| single-strand DNA-binding protein [Vibrio sp. AND4]
gi|159173295|gb|EDP58121.1| single-strand DNA-binding protein [Vibrio sp. AND4]
Length = 184
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEVVVQ 105
>gi|365146438|ref|ZP_09349232.1| single-strand binding protein [Klebsiella sp. 4_1_44FAA]
gi|363643219|gb|EHL82542.1| single-strand binding protein [Klebsiella sp. 4_1_44FAA]
Length = 180
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTG--EMRENTEWHRVVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D G + + E+ + ++G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRNWQDDA-GVTRYVTEVLVGQNGT 109
>gi|449266777|gb|EMC77790.1| Single-stranded DNA-binding protein, mitochondrial, partial
[Columba livia]
Length = 143
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V P+ + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 22 RSMNRVQLLGRVGQDPIMRQVEGKNPVTIFSLATNEMWRTGDSDVTQGGDISQKTTWHRI 81
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L + + K S +YVEG I+ Y D N
Sbjct: 82 SVFRPGLRDVTYQYVKKGSRLYVEGKIDYGEYTDKNN 118
>gi|423729782|ref|ZP_17703103.1| single-stranded DNA-binding family protein, partial [Vibrio
cholerae HC-17A1]
gi|408627797|gb|EKL00596.1| single-stranded DNA-binding family protein, partial [Vibrio
cholerae HC-17A1]
Length = 176
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VY+EG ++ R + D
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQD 91
>gi|343508692|ref|ZP_08746009.1| single-stranded DNA-binding protein [Vibrio scophthalmi LMG 19158]
gi|342807282|gb|EGU42472.1| single-stranded DNA-binding protein [Vibrio scophthalmi LMG 19158]
Length = 149
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + NG V ++ T + + G + + +WHR+A++
Sbjct: 4 RGINKVILVGNLGADPEVRYMPNGTAVANITIATSESWRDKASGEQR--EKTEWHRVALY 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + + G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQNQ-QGQDQYTTEVVVQ 105
>gi|440746844|ref|ZP_20926119.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
gi|440370691|gb|ELQ07578.1| single-stranded DNA-binding protein [Pseudomonas syringae
BRIP39023]
Length = 201
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|416872470|ref|ZP_11916708.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 152504]
gi|334845999|gb|EGM24557.1| single-stranded DNA-binding protein [Pseudomonas aeruginosa 152504]
Length = 165
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + GK VT S+ T + + G + + +WHR+ +
Sbjct: 3 RGVNKVILVGHLGQDPDARSTPGGKAVTSLSLATSESWKDKQTGQQQ--ERTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
L A + L K S VY+EG + R + +G+ E+ + +GN
Sbjct: 61 GR-LAEIAAQYLRKGSQVYIEGSLRTRKWQGQ-DGQDHYSTEVVVDINGN 108
>gi|238898622|ref|YP_002924303.1| single-stranded DNA-binding protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|229466381|gb|ACQ68155.1| single-stranded DNA-binding protein [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + +G VT ++ T + R +++ + +WHR+ +
Sbjct: 4 RGINKVILVGYLGQDPEVRRMPSGNPVTNITIATSESW--RDKQTEEQKEKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ L A K L K S VY+EG ++ R + D NG+ + E+ +
Sbjct: 62 GK-LAEVAEKYLRKGSQVYIEGALQTRKWTDQ-NGQDRYTTEVIV 104
>gi|229507037|ref|ZP_04396543.1| single-stranded DNA-binding protein [Vibrio cholerae BX 330286]
gi|229508808|ref|ZP_04398300.1| single-stranded DNA-binding protein [Vibrio cholerae B33]
gi|229519796|ref|ZP_04409239.1| single-stranded DNA-binding protein [Vibrio cholerae RC9]
gi|229520042|ref|ZP_04409471.1| single-stranded DNA-binding protein [Vibrio cholerae TM 11079-80]
gi|229606321|ref|YP_002876969.1| single-stranded DNA-binding protein [Vibrio cholerae MJ-1236]
gi|254850629|ref|ZP_05239979.1| single strand DNA-binding protein [Vibrio cholerae MO10]
gi|298501070|ref|ZP_07010871.1| single strand DNA-binding protein [Vibrio cholerae MAK 757]
gi|229342991|gb|EEO07980.1| single-stranded DNA-binding protein [Vibrio cholerae TM 11079-80]
gi|229344485|gb|EEO09460.1| single-stranded DNA-binding protein [Vibrio cholerae RC9]
gi|229354211|gb|EEO19142.1| single-stranded DNA-binding protein [Vibrio cholerae B33]
gi|229355782|gb|EEO20702.1| single-stranded DNA-binding protein [Vibrio cholerae BX 330286]
gi|229368976|gb|ACQ59399.1| single-stranded DNA-binding protein [Vibrio cholerae MJ-1236]
gi|254846334|gb|EET24748.1| single strand DNA-binding protein [Vibrio cholerae MO10]
gi|297540318|gb|EFH76378.1| single strand DNA-binding protein [Vibrio cholerae MAK 757]
Length = 183
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 10 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 67
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VY+EG ++ R + D
Sbjct: 68 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQD 97
>gi|449016618|dbj|BAM80020.1| single strand binding protein, SSB [Cyanidioschyzon merolae strain
10D]
Length = 238
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 84 VHKAIICGKVKDTPVQKILR-NGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
V++ ++ G V PV + L +G TVT+F + T + S+ L QWH IA+++
Sbjct: 72 VNRVLLVGHVGRDPVTRQLTADGSTVTLFPLATKEFTSSQNASSQVL---TQWHNIAIYD 128
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
LG K VYVEG ++ R + D+ G V+ E+ +
Sbjct: 129 SKLGEIIQNACRKGYQVYVEGRLQSRQWTDA-KGVVRTHFEVAV 171
>gi|442609607|ref|ZP_21024344.1| Single-stranded DNA-binding protein [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441749079|emb|CCQ10406.1| Single-stranded DNA-binding protein [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 219
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V S+ T + + G L + +WHR+ +
Sbjct: 3 RGVNKVILVGNLGQDPEVRYMPNGNGVANISIATTDSWKDKNTG--QLQERTEWHRVVLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
E+ G Y L K S VY+EG ++ R + D G+ + EI + G
Sbjct: 61 GKLAEVAGEY----LRKGSQVYIEGRLQTRKWTDQ-GGQERYTTEIVVDMGG 107
>gi|431805729|ref|YP_007232630.1| ssDNA-binding protein [Liberibacter crescens BT-1]
gi|430799704|gb|AGA64375.1| Single-stranded DNA-binding protein [Liberibacter crescens BT-1]
Length = 168
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K II G + P + ++G+ + + T + R + + + +WH + + NE
Sbjct: 5 INKVIIIGNLGADPEIRRTQDGRMIVSIRIATSETWRDR--NTNERREKTEWHNVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D NG + EI ++
Sbjct: 63 GLCKIAEQYLTKGSKVYIEGQLQTRKWKDQ-NGNDRYTTEIVLQ 105
>gi|410664338|ref|YP_006916709.1| single-stranded DNA-binding protein [Simiduia agarivorans SA1 = DSM
21679]
gi|409026695|gb|AFU98979.1| single-stranded DNA-binding protein [Simiduia agarivorans SA1 = DSM
21679]
Length = 172
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P K + +G VT S+ T + + G + +WHR+
Sbjct: 3 RGINKVILVGNLGQDPETKYMPSGGAVTNVSIATSETWKDKQTGQPQ--ERTEWHRVVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
N EI G Y L K S VYVEG + R + +G+ + EI
Sbjct: 61 NRLAEIAGEY----LKKGSKVYVEGSLRTRKWQGQ-DGQDRYTTEIV 102
>gi|407976899|ref|ZP_11157794.1| single-strand binding protein [Nitratireductor indicus C115]
gi|407427626|gb|EKF40315.1| single-strand binding protein [Nitratireductor indicus C115]
Length = 169
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + + +WH + + N+
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDPVVNLRIATSETWRDRQSGER--RERTEWHNVVIFND 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG+ + EI +++
Sbjct: 63 NLAKVAEQYLKKGAKVYLEGQLQTRKWTDQ-NGQDRYTTEIVLQK 106
>gi|2624694|pdb|3ULL|A Chain A, Human Mitochondrial Single-Stranded Dna Binding Protein
gi|2624695|pdb|3ULL|B Chain B, Human Mitochondrial Single-Stranded Dna Binding Protein
gi|50513440|pdb|1S3O|A Chain A, Human Mitochondrial Single Strand Dna Binding Protein
(Hmssb)
gi|50513441|pdb|1S3O|B Chain B, Human Mitochondrial Single Strand Dna Binding Protein
(Hmssb)
Length = 132
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 12 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRI 71
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 72 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 108
>gi|3851548|gb|AAC72352.1| single strand DNA-binding protein [Vibrio cholerae C6706]
Length = 192
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 19 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 76
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
E+ G Y L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 77 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 120
>gi|372490084|ref|YP_005029649.1| single stranded DNA-binding protein [Dechlorosoma suillum PS]
gi|359356637|gb|AEV27808.1| single stranded DNA-binding protein [Dechlorosoma suillum PS]
Length = 164
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
V+K I+ G + P + + NG V + T + R G K + +WHR+
Sbjct: 3 AVNKVILLGNLGADPETRYMPNGDAVATVRLATTETWKDRNSGEKR--EATEWHRVVFFR 60
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI+G Y L K SSVY+EG I R + D +G+ + EI
Sbjct: 61 KLAEIVGQY----LKKGSSVYIEGRIRTRKWQDK-DGQERYTTEI 100
>gi|167949714|ref|ZP_02536788.1| Single-strand binding protein [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|345862683|ref|ZP_08814897.1| single-stranded DNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345126025|gb|EGW55891.1| single-stranded DNA-binding protein [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 148
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + +G VT +V T + + G + + +WHR+
Sbjct: 3 RGINKVILIGNLGRDPETRYMPSGGAVTNVTVATSDSWKDKNTGEQQ--ERTEWHRVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N L A + L K S VYVEG ++ R +
Sbjct: 61 NR-LAEIAAEYLKKGSKVYVEGRLQTRKW 88
>gi|402496938|ref|YP_006556198.1| single-stranded DNA-binding protein ssb [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650211|emb|CCF78381.1| single-stranded DNA-binding protein ssb [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 158
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +++GK + FS+ T + + G + + +WH I V +E
Sbjct: 6 VNKVILVGNLGKDPEIRTMQSGKEMASFSIATSENWTDKFSGIR--SEKTEWHNIVVFSE 63
Query: 144 ILGSYAVKQLV-KNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L +K LV K S VY+EG + R Y D NG + E+ ++
Sbjct: 64 GLVK-IIKDLVRKGSKVYIEGSLRTRKYTDQ-NGSERYTTEVMLQ 106
>gi|212710298|ref|ZP_03318426.1| hypothetical protein PROVALCAL_01357 [Providencia alcalifaciens DSM
30120]
gi|422020541|ref|ZP_16367079.1| single-stranded DNA-binding protein [Providencia alcalifaciens
Dmel2]
gi|212687105|gb|EEB46633.1| hypothetical protein PROVALCAL_01357 [Providencia alcalifaciens DSM
30120]
gi|414101178|gb|EKT62779.1| single-stranded DNA-binding protein [Providencia alcalifaciens
Dmel2]
Length = 172
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILIGNLGQDPEIRYMPNGGAVANLTLATSESWRDKQTG--EMREKTEWHRVVIF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A + L K S VY+EG ++ R + D
Sbjct: 62 GK-LAEVAGEYLKKGSQVYIEGSLQTRKWQD 91
>gi|86138434|ref|ZP_01057008.1| single-strand binding protein [Roseobacter sp. MED193]
gi|85824959|gb|EAQ45160.1| single-strand binding protein [Roseobacter sp. MED193]
Length = 171
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 5 VNKVILIGNLGRDPEVRSFQNGGKVCNLRIATSENWKDRNTGER--RERTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG ++ R + D
Sbjct: 63 GLVRVAEQYLRKGSKVYIEGQLQTRKWQD 91
>gi|62205329|gb|AAH93054.1| Single-stranded DNA binding protein 1 [Homo sapiens]
Length = 148
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 28 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKRSRIYLEGKIDYGEYMDKNN 124
>gi|42520614|ref|NP_966529.1| single-strand binding protein [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99034516|ref|ZP_01314498.1| hypothetical protein Wendoof_01000693 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410353|gb|AAS14463.1| single-strand binding protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 160
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + +NGK + FS+ T + ++ G + + +WH I + +E
Sbjct: 6 INKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKLSGMR--SEKTEWHNIVIFSE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L K S VYVEG + R + D GE
Sbjct: 64 GLVKIVKDFARKGSKVYVEGSLRTRKWTDQNGGE 97
>gi|21233694|ref|NP_639992.1| Single-strand DNA binding protein [Proteus vulgaris]
gi|21202878|dbj|BAB93594.1| Single-strand DNA binding protein [Proteus vulgaris]
Length = 154
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K II GK+ P + NG +V SV T + + G + + +WHR+
Sbjct: 4 RGVNKVIIVGKLGQDPEVHAMANGGSVANISVATSETWRDKQTGEQR--EKTEWHRVVFF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+++G Y L K S +Y+EG + R + D
Sbjct: 62 GKLADVVGEY----LRKGSQIYIEGQLSTRKWQD 91
>gi|444308449|ref|ZP_21144094.1| single-strand binding protein [Ochrobactrum intermedium M86]
gi|443488032|gb|ELT50789.1| single-strand binding protein [Ochrobactrum intermedium M86]
Length = 171
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + L +G V + T + R G + +WH + + NE
Sbjct: 5 VNKVILVGNLGADPEIRRLNSGDVVANLRIATSESWRDRQTGER--KDRTEWHSVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A + L K + VY+EG ++ R + D NG + E+ +++
Sbjct: 63 NLAKVAEQYLKKGAKVYIEGALQTRKWQDQ-NGNDRYSTEVVLQK 106
>gi|221057181|ref|XP_002259728.1| single-strand binding protein [Plasmodium knowlesi strain H]
gi|193809800|emb|CAQ40504.1| single-strand binding protein, putative [Plasmodium knowlesi strain
H]
Length = 280
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 80 GFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIA 139
G + ++K + G+V P KIL G V FS+ T + R + +L WHRI
Sbjct: 73 GEKSLNKISLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRIV 130
Query: 140 VHNEILGSYAVKQLVKNSSVYVEGDIEIRV-YNDSINGEVKNIPEICI 186
V+++ + K L K VY++G + R + + + + + I E+ +
Sbjct: 131 VYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQPRQITEVVL 178
>gi|15603815|ref|NP_246889.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
multocida str. Pm70]
gi|37999461|sp|Q9CJP4.1|SSB_PASMU RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|12722386|gb|AAK04034.1| Ssb [Pasteurella multocida subsp. multocida str. Pm70]
Length = 166
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTG-GLFDQRIVGSKDLPKPVQWHRIAVH 141
GV+K II G + + P + + NG+ V SV T D+ +++ +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREV---TEWHRIVFY 59
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 60 RRQAEVAGEY----LRKGSKVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|422296853|ref|ZP_16384505.1| Single-stranded DNA-binding protein [Pseudomonas avellanae BPIC
631]
gi|407991890|gb|EKG33638.1| Single-stranded DNA-binding protein [Pseudomonas avellanae BPIC
631]
Length = 197
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|261494925|ref|ZP_05991395.1| bifunctional single-stranded DNA-binding protein/integrase
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309419|gb|EEY10652.1| bifunctional single-stranded DNA-binding protein/integrase
[Mannheimia haemolytica serotype A2 str. OVINE]
Length = 152
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHR-IAVH 141
G++K II G++ + P + + NG +V SV T + ++ G K + +WH IA
Sbjct: 3 GINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDKVSGDKK--QATEWHSIIAFR 60
Query: 142 N--EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N +I+G Y L K S VYVEG + R +
Sbjct: 61 NLADIIGKY----LKKGSQVYVEGKLRTRKW 87
>gi|422890436|ref|ZP_16932862.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-40A1]
gi|341627798|gb|EGS53094.1| single-stranded DNA-binding protein [Vibrio cholerae HC-40A1]
Length = 168
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VY+EG ++ R + D
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQD 91
>gi|225631068|ref|ZP_03787804.1| single-strand binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591235|gb|EEH12381.1| single-strand binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 157
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + +NGK + FS+ T + ++ G + + +WH I + +E
Sbjct: 6 INKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKLSGMR--SEKTEWHNIVIFSE 63
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
L K S VYVEG + R + D GE
Sbjct: 64 GLVKIVKDFARKGSKVYVEGSLRTRKWTDQNGGE 97
>gi|99081266|ref|YP_613420.1| single-strand binding protein [Ruegeria sp. TM1040]
gi|99037546|gb|ABF64158.1| single-strand binding protein [Ruegeria sp. TM1040]
Length = 174
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G + P + +NG V + T + R G + + +WH +A+ NE
Sbjct: 5 LNKVMLIGNLGRDPEVRSFQNGGKVCNLRIATSETWKDRNTGER--REKTEWHSVAIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VYVEG ++ R + D
Sbjct: 63 GLVRVAEQYLRKGSKVYVEGQLQTRKWQD 91
>gi|378962346|ref|YP_005219832.1| ssDNA-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|374356218|gb|AEZ47979.1| Single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 176
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + R G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDRQTG--EMKEQTEWHRVVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D +G+ + EI + + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIG 108
>gi|163867692|ref|YP_001608893.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161017340|emb|CAK00898.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 148
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G + D P K + +G + F + T + + K +WH + V N
Sbjct: 2 LNKVMLIGYLGDDPESKTMTSGAEIVNFRMATSESYTDKATNKK--VGKTEWHSVVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A++ L K S VY+EG ++ R + D NG EI + +
Sbjct: 60 HLAKIALQYLSKGSKVYIEGKLQTRKWQDK-NGHDCYTTEIILSQ 103
>gi|386818218|ref|ZP_10105436.1| single-strand binding protein [Thiothrix nivea DSM 5205]
gi|386422794|gb|EIJ36629.1| single-strand binding protein [Thiothrix nivea DSM 5205]
Length = 156
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P K + +G +T +V T + + G K + +WHRI
Sbjct: 3 RGINKVILVGTLGKDPEVKYMPSGGAITNVTVATNDSYKDKNTGEK--KETTEWHRIVFF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N EI G Y L K VY+EG ++ R +
Sbjct: 61 NRLAEIAGEY----LRKGQQVYIEGRLQTRKW 88
>gi|163752256|ref|ZP_02159456.1| single-strand binding protein [Shewanella benthica KT99]
gi|161327839|gb|EDP99019.1| single-strand binding protein [Shewanella benthica KT99]
Length = 227
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V F+V T + + ++ +WH I ++
Sbjct: 4 RGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQQQER---TEWHNIVMY 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
EI G Y L K S VY+EG ++ + D G+ + EI
Sbjct: 61 RRLAEIAGEY----LKKGSKVYIEGKLQTSKWQDQATGQDRYKTEI 102
>gi|8569289|pdb|1QVC|A Chain A, Crystal Structure Analysis Of Single Stranded Dna Binding
Protein (Ssb) From E.Coli
gi|8569290|pdb|1QVC|B Chain B, Crystal Structure Analysis Of Single Stranded Dna Binding
Protein (Ssb) From E.Coli
gi|8569291|pdb|1QVC|C Chain C, Crystal Structure Analysis Of Single Stranded Dna Binding
Protein (Ssb) From E.Coli
gi|8569292|pdb|1QVC|D Chain D, Crystal Structure Analysis Of Single Stranded Dna Binding
Protein (Ssb) From E.Coli
Length = 145
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 3 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 61 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGT 108
>gi|328543831|ref|YP_004303940.1| ssDNA-binding protein [Polymorphum gilvum SL003B-26A1]
gi|326413575|gb|ADZ70638.1| Single-stranded DNA-binding protein [Polymorphum gilvum
SL003B-26A1]
Length = 176
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++GK + + T + R G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGADPEIRRTQDGKPIANLRIATSESWRDRNTGERR--ERTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKIAEQYLRKGAKVYIEGQLQTRKWQD 91
>gi|289812038|ref|ZP_06542667.1| single-stranded DNA-binding protein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 176
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + R G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDRQTG--EMKEQTEWHRVVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D +G+ + EI + + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQERYTTEINVPQIG 108
>gi|163869071|ref|YP_001610305.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
gi|161018752|emb|CAK02310.1| single-strand binding protein (ssb) [Bartonella tribocorum CIP
105476]
Length = 152
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P K + +G V F + T + + K +WH + V N
Sbjct: 7 LNKVILIGYLGANPESKTMSSGAEVVNFRMATSESYTDKATNKK--VDKTEWHSVVVFNP 64
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRR 188
L A++ L K S VY+EG ++ R + D NG + + E+ + +
Sbjct: 65 HLAKIALQYLKKGSKVYIEGQLQTRKWQDK-NGIERFVTEVILPK 108
>gi|395765076|ref|ZP_10445692.1| single-strand binding protein [Bartonella sp. DB5-6]
gi|395412929|gb|EJF79408.1| single-strand binding protein [Bartonella sp. DB5-6]
Length = 148
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K + G++ P K + +G V F + T + + K + +WH + V N
Sbjct: 2 LNKVTLIGRLGADPESKTMPSGGEVVNFRMATSESYTDKNTHQK--VEKTEWHSVVVFNP 59
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A++ L K S VYVEG ++ R + D NG ++ EI +
Sbjct: 60 HLAKIALQYLNKGSKVYVEGKLQTRKWQDK-NGNERHTTEIVL 101
>gi|359400119|ref|ZP_09193111.1| single-strand DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
gi|357598545|gb|EHJ60271.1| single-strand DNA-binding protein [Novosphingobium
pentaromativorans US6-1]
Length = 192
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPEVRSFQNGGKVCNLRIATSESWKDRNTGERQ--ERTEWHTVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG + R + D
Sbjct: 63 GLAGVAERFLKKGSKVYIEGQLRTRKWQD 91
>gi|242238175|ref|YP_002986356.1| single-strand binding protein [Dickeya dadantii Ech703]
gi|242130232|gb|ACS84534.1| single-strand binding protein [Dickeya dadantii Ech703]
Length = 180
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILLGHLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQK--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG ++ R + D +G+ + EI + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYTTEIVVNVGGT 109
>gi|126030307|pdb|2DUD|A Chain A, Crystal Structure Of Human Mitochondrial Single-Stranded
Dna-Binding Protein(Hmtssb)
gi|126030308|pdb|2DUD|B Chain B, Crystal Structure Of Human Mitochondrial Single-Stranded
Dna-Binding Protein(Hmtssb)
Length = 133
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 13 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRI 72
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 73 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 109
>gi|147870|gb|AAA24649.1| single-strand DNA-binding protein (ssb) [Escherichia coli]
Length = 178
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
+ L A + L K S VY+EG + R + D +G+ + E+ + G
Sbjct: 62 GK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGG 108
>gi|419954703|ref|ZP_14470839.1| putative single stranded DNA binding protein [Pseudomonas stutzeri
TS44]
gi|387968567|gb|EIK52856.1| putative single stranded DNA binding protein [Pseudomonas stutzeri
TS44]
Length = 164
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + L NG VT ++ T + + G L + +WHR+ +
Sbjct: 3 RGVNKVILIGNVGGDPETRYLPNGNAVTNITLATTDSWKDKQTGQ--LQERTEWHRVVLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S Y+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQCYIEGRLQTREW 88
>gi|92117607|ref|YP_577336.1| single-stranded DNA-binding protein [Nitrobacter hamburgensis X14]
gi|91800501|gb|ABE62876.1| single-strand binding protein [Nitrobacter hamburgensis X14]
Length = 163
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + + T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILIGNLGADPEIKRTQDGRPIANLRIATSETWRDKTSGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGQLQTRKWTD 91
>gi|28899483|ref|NP_799088.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus RIMD
2210633]
gi|153839889|ref|ZP_01992556.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
AQ3810]
gi|260363349|ref|ZP_05776201.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus K5030]
gi|260879283|ref|ZP_05891638.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
AN-5034]
gi|260897295|ref|ZP_05905791.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|260902462|ref|ZP_05910857.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
AQ4037]
gi|417321440|ref|ZP_12107978.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus 10329]
gi|433658780|ref|YP_007276159.1| Single-stranded DNA-binding protein [Vibrio parahaemolyticus
BB22OP]
gi|37999377|sp|Q87LA3.1|SSB_VIBPA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|28807719|dbj|BAC60972.1| single-strand binding protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149746586|gb|EDM57574.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
AQ3810]
gi|308087212|gb|EFO36907.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|308093088|gb|EFO42783.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
AN-5034]
gi|308109565|gb|EFO47105.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus
AQ4037]
gi|308111165|gb|EFO48705.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus K5030]
gi|328471380|gb|EGF42275.1| single-stranded DNA-binding protein [Vibrio parahaemolyticus 10329]
gi|432509468|gb|AGB10985.1| Single-stranded DNA-binding protein [Vibrio parahaemolyticus
BB22OP]
Length = 176
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A + L K S VYVEG ++ R + D
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQD 91
>gi|334140744|ref|YP_004533946.1| single-strand DNA-binding protein [Novosphingobium sp. PP1Y]
gi|333938770|emb|CCA92128.1| single-strand DNA-binding protein [Novosphingobium sp. PP1Y]
Length = 190
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILVGNLGADPEVRSFQNGGKVCNLRIATSESWKDRNTGERQ--ERTEWHTVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG + R + D
Sbjct: 63 GLAGVAERFLKKGSKVYIEGQLRTRKWQD 91
>gi|121610654|ref|YP_998461.1| single-strand-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121555294|gb|ABM59443.1| single-strand binding protein [Verminephrobacter eiseniae EF01-2]
Length = 167
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+KAII G + P + +G V S+ T + + G L + +WHR AV N
Sbjct: 4 VNKAIIVGYLGRDPEMRTFPSGDQVATVSIATTDRWKDKQTGQ--LKEATEWHR-AVFNG 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VYVEG + R + D
Sbjct: 61 RLAEIAGQYLRKGAQVYVEGSLRTRKWTD 89
>gi|444427510|ref|ZP_21222889.1| ssDNA-binding protein [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444239267|gb|ELU50839.1| ssDNA-binding protein [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 177
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A + L K S VYVEG ++ R + D
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQD 91
>gi|428937163|ref|ZP_19010491.1| single-stranded DNA-binding protein [Klebsiella pneumoniae JHCK1]
gi|426296839|gb|EKV59408.1| single-stranded DNA-binding protein [Klebsiella pneumoniae JHCK1]
Length = 180
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTG--EMRENTEWHRVVMF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
E+ G Y L K + VY+EG + R + D G + + E+ + ++G
Sbjct: 62 GKLAEVAGEY----LRKGAQVYIEGQLRTRNWQDDA-GVTRYVTEVLVGQNGT 109
>gi|416029203|ref|ZP_11572044.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|320326953|gb|EFW82970.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 201
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWADKQSGQKV--EKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|156094446|ref|XP_001613260.1| single-strand binding protein [Plasmodium vivax Sal-1]
gi|148802134|gb|EDL43533.1| single-strand binding protein, putative [Plasmodium vivax]
Length = 280
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 80 GFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIA 139
G + ++K + G+V P KIL G V FS+ T + R + +L WHRI
Sbjct: 72 GEKSLNKISLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDR--NTNELKSKTDWHRIV 129
Query: 140 VHNEILGSYAVKQLVKNSSVYVEGDIEIRV-YNDSINGEVKNIPEICI 186
V+++ + K L K VY++G + R + + + + + I E+ +
Sbjct: 130 VYDQNIVDLVDKFLRKGRRVYIQGSLHTRRWFGNDLTNQPRQITEVVL 177
>gi|388601516|ref|ZP_10159912.1| ssDNA-binding protein [Vibrio campbellii DS40M4]
Length = 179
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A + L K S VYVEG ++ R + D
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQD 91
>gi|345877715|ref|ZP_08829454.1| Lon protease 2 [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344225245|gb|EGV51609.1| Lon protease 2 [endosymbiont of Riftia pachyptila (vent Ph05)]
Length = 156
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + +G VT +V T + + G + + +WHR+
Sbjct: 11 RGINKVILIGNLGRDPETRYMPSGGAVTNVTVATSDSWKDKNTGEQQ--ERTEWHRVVFF 68
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N L A + L K S VYVEG ++ R +
Sbjct: 69 NR-LAEIAAEYLKKGSKVYVEGRLQTRKW 96
>gi|209694058|ref|YP_002261986.1| single-stranded DNA-binding protein [Aliivibrio salmonicida
LFI1238]
gi|208008009|emb|CAQ78146.1| single-stranded DNA-binding protein [Aliivibrio salmonicida
LFI1238]
Length = 183
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + +G V ++ T + + G + + +WHR+A+
Sbjct: 4 RGINKVILVGNLGQDPEIRYMPSGGAVANITIATSESWRDKATGEQR--EKTEWHRVALF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRFTTEVVVQ 105
>gi|153834027|ref|ZP_01986694.1| single-stranded DNA-binding protein [Vibrio harveyi HY01]
gi|156975939|ref|YP_001446846.1| single-stranded DNA-binding protein [Vibrio harveyi ATCC BAA-1116]
gi|148869671|gb|EDL68657.1| single-stranded DNA-binding protein [Vibrio harveyi HY01]
gi|156527533|gb|ABU72619.1| hypothetical protein VIBHAR_03705 [Vibrio harveyi ATCC BAA-1116]
Length = 178
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A + L K S VYVEG ++ R + D
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQD 91
>gi|114707073|ref|ZP_01439972.1| single-strand DNA binding protein [Fulvimarina pelagi HTCC2506]
gi|114537623|gb|EAU40748.1| single-strand DNA binding protein [Fulvimarina pelagi HTCC2506]
Length = 169
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++GK + FSV T + R G + + +WHR+ NE
Sbjct: 5 VNKVILVGNLGADPEMRRTQDGKPIANFSVATSESWRDRNSGER--REKTEWHRVVCFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVY 170
L + + K S VY+EG ++ R +
Sbjct: 63 GLNKVIEQYVKKGSKVYIEGQLQTRKW 89
>gi|56692915|ref|YP_164279.1| single-stranded DNA-binding protein [Pseudomonas phage F116]
gi|48527501|gb|AAT45876.1| single-stranded DNA-binding protein [Pseudomonas phage F116]
Length = 167
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + GK VT S+ T + + G + + +WHR+ +
Sbjct: 3 RGVNKVILVGHLGQDPDARSTPGGKAVTSLSLATSESWKDKQTGQQQ--ERTEWHRVVLF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
L A + L K S VY+EG + R + +G+ E+ + +GN
Sbjct: 61 GR-LAEIAAQYLRKGSQVYIEGSLRTRKWQGQ-DGQDHYSTEVVVDINGN 108
>gi|424034139|ref|ZP_17773547.1| single-stranded DNA-binding protein [Vibrio cholerae HENC-01]
gi|424041433|ref|ZP_17779363.1| single-stranded DNA-binding protein [Vibrio cholerae HENC-02]
gi|408873633|gb|EKM12828.1| single-stranded DNA-binding protein [Vibrio cholerae HENC-01]
gi|408890738|gb|EKM28767.1| single-stranded DNA-binding protein [Vibrio cholerae HENC-02]
Length = 179
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSESWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VYVEG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYVEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|407774935|ref|ZP_11122231.1| ssDNA-binding protein [Thalassospira profundimaris WP0211]
gi|407281883|gb|EKF07443.1| ssDNA-binding protein [Thalassospira profundimaris WP0211]
Length = 175
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + GK + FS+ T + R G + + +WHRI V NE
Sbjct: 5 VNKVILVGNLGRDPEIRFTQAGKKIANFSIATSEQWRDRQSGER--RERTEWHRIVVFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVY 170
L + + K S +Y+EG + R +
Sbjct: 63 GLADVVERFVKKGSKLYIEGQLRTRKW 89
>gi|126643294|ref|YP_001086278.1| recombinase B [Acinetobacter baumannii ATCC 17978]
Length = 166
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 108 VTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEI 167
+T FS+ T ++ + G + + +WHRI +HN LG A + L K S VY+EG +
Sbjct: 1 MTQFSIATSEVWTDKNTGERK--EQTEWHRIVLHNR-LGEIAQQFLRKGSKVYIEGSLRT 57
Query: 168 RVYNDSINGEVKNIPEI 184
R + D NG+ + EI
Sbjct: 58 RQWTDQ-NGQERYTTEI 73
>gi|443534094|ref|ZP_21100015.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-80A1]
gi|443462738|gb|ELT33768.1| single-stranded DNA-binding protein, partial [Vibrio cholerae
HC-80A1]
Length = 162
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G + + +WHR+ ++
Sbjct: 4 RGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK--EKTEWHRVTLY 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
E+ G Y L K S VY+EG ++ R + D
Sbjct: 62 GKLAEVAGEY----LRKGSQVYIEGQLQTRKWQD 91
>gi|400406509|ref|YP_006589257.1| single stranded DNA-binding protein [secondary endosymbiont of
Heteropsylla cubana]
gi|400364762|gb|AFP85829.1| single stranded DNA-binding protein [secondary endosymbiont of
Heteropsylla cubana]
Length = 175
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 10/112 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G + + +WHRI
Sbjct: 4 RGVNKVILIGNLGHDPEIRYMPNGGAVANITLATSETWRDKQTG--ESREKTEWHRIVFF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
EI G Y L K S VY+EG ++ R + D +G+ + E+ + +G
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGSLQTRKWQDQ-SGQDRYTTEVVVNMNG 108
>gi|383310967|ref|YP_005363777.1| single-strand DNA-binding protein [Pasteurella multocida subsp.
multocida str. HN06]
gi|417854829|ref|ZP_12500097.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|425064690|ref|ZP_18467815.1| Single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida X73]
gi|425066805|ref|ZP_18469925.1| Single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida P1059]
gi|338217305|gb|EGP03192.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|380872239|gb|AFF24606.1| single-strand DNA-binding protein [Pasteurella multocida subsp.
multocida str. HN06]
gi|404380591|gb|EJZ77081.1| Single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida P1059]
gi|404380876|gb|EJZ77365.1| Single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida X73]
Length = 166
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTG-GLFDQRIVGSKDLPKPVQWHRIAVH 141
GV+K II G + + P + + NG+ V SV T D+ +++ +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREV---TEWHRIVFY 59
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 60 RRQAEVAGEY----LRKGSKVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|333375873|ref|ZP_08467671.1| single-strand binding protein [Kingella kingae ATCC 23330]
gi|332969331|gb|EGK08356.1| single-strand binding protein [Kingella kingae ATCC 23330]
Length = 173
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P + + NG V FSV T + R G + + +WH I ++
Sbjct: 3 LNKVMLIGRLGRDPETRYMPNGDAVCNFSVATSENWTDRNNGQRQ--ERTEWHNITMYRR 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
A + L K S VY+EG I+ R Y D E +C
Sbjct: 61 -QAEIAAQYLRKGSQVYLEGKIQSRKYTDKTGAERTAYDIVC 101
>gi|283836653|ref|ZP_06356394.1| single-strand binding protein [Citrobacter youngae ATCC 29220]
gi|291067392|gb|EFE05501.1| single-strand binding protein [Citrobacter youngae ATCC 29220]
Length = 174
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGVEKYTTEVVVNVGGT 109
>gi|378775005|ref|YP_005177248.1| single-stranded DNA-binding protein [Pasteurella multocida 36950]
gi|417852087|ref|ZP_12497730.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|421264702|ref|ZP_15715668.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|338217801|gb|EGP03638.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|356597553|gb|AET16279.1| single-stranded DNA-binding protein [Pasteurella multocida 36950]
gi|401687814|gb|EJS83511.1| single-stranded DNA-binding protein [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 166
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTG-GLFDQRIVGSKDLPKPVQWHRIAVH 141
GV+K II G + + P + + NG+ V SV T D+ +++ +WHRI +
Sbjct: 3 GVNKVIIVGNLGNDPEIRTMPNGEAVANISVATSESWIDKNTNERREV---TEWHRIVFY 59
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG ++ R + D NG+ + EI
Sbjct: 60 RRQAEVAGEY----LRKGSKVYVEGRLKTRKWQDQ-NGQDRYTTEI 100
>gi|374314402|ref|YP_005060831.1| single-strand DNA-binding protein [Serratia symbiotica str. 'Cinara
cedri']
gi|363988628|gb|AEW44819.1| single-strand DNA-binding protein [Serratia symbiotica str. 'Cinara
cedri']
Length = 169
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 10/108 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + +I G + + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKITGEQK--EKTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
E+ G Y L K + VY+EG ++ R + D +G K E+ +
Sbjct: 62 GKVAEVAGEY----LRKGAQVYIEGSLQTRKWTDQ-SGTEKYTTEVIV 104
>gi|302130268|ref|ZP_07256258.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
tomato NCPPB 1108]
Length = 201
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGINKVILVGTCGQDPDCRYLPNGTAVTNLSLATSEQWTDKQSGQKV--EKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|238020331|ref|ZP_04600757.1| hypothetical protein GCWU000324_00211 [Kingella oralis ATCC 51147]
gi|237867311|gb|EEP68317.1| hypothetical protein GCWU000324_00211 [Kingella oralis ATCC 51147]
Length = 178
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K I+ G + P + + NG V FS+ T ++ R G + + +WH I ++
Sbjct: 3 LNKVILIGNLGRDPELRYMPNGDAVCNFSIATSESWNDRNSGQRQ--ERTEWHNITLYRR 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K S VY+EG I+ R Y D
Sbjct: 61 -LAEVAGQYLKKGSQVYIEGKIQSRKYTD 88
>gi|33519511|ref|NP_878343.1| single-strand DNA-binding protein [Candidatus Blochmannia
floridanus]
gi|33517174|emb|CAD83556.1| single-strand DNA-binding protein [Candidatus Blochmannia
floridanus]
Length = 158
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 10/109 (9%)
Query: 81 FRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAV 140
FRG++K I+ G + P + + NG V S+ T + + + + + +WHR+ +
Sbjct: 3 FRGINKVILVGYLGQDPEIRYMSNGNPVANISIATTDTWKDK--QTNEFKEKTEWHRVVL 60
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
EI SY L K S VY+EG + R + + +G+ + EI +
Sbjct: 61 FGKLAEITSSY----LRKGSQVYIEGSLRTRKWQNQ-DGQDRYTTEIIV 104
>gi|4507231|ref|NP_003134.1| single-stranded DNA-binding protein, mitochondrial precursor [Homo
sapiens]
gi|374671775|ref|NP_001243439.1| single-stranded DNA-binding protein, mitochondrial precursor [Homo
sapiens]
gi|374671785|ref|NP_001243440.1| single-stranded DNA-binding protein, mitochondrial precursor [Homo
sapiens]
gi|374671787|ref|NP_001243441.1| single-stranded DNA-binding protein, mitochondrial precursor [Homo
sapiens]
gi|374671789|ref|NP_001243442.1| single-stranded DNA-binding protein, mitochondrial precursor [Homo
sapiens]
gi|114616378|ref|XP_001156267.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 3 [Pan troglodytes]
gi|114616380|ref|XP_001156319.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 4 [Pan troglodytes]
gi|114616382|ref|XP_001156384.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 5 [Pan troglodytes]
gi|114616386|ref|XP_001156496.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 7 [Pan troglodytes]
gi|114616388|ref|XP_001156549.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 8 [Pan troglodytes]
gi|397484521|ref|XP_003813422.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 1 [Pan paniscus]
gi|397484523|ref|XP_003813423.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 2 [Pan paniscus]
gi|397484525|ref|XP_003813424.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 3 [Pan paniscus]
gi|397484527|ref|XP_003813425.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 4 [Pan paniscus]
gi|397484529|ref|XP_003813426.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 5 [Pan paniscus]
gi|426358137|ref|XP_004046377.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 1 [Gorilla gorilla gorilla]
gi|426358139|ref|XP_004046378.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 2 [Gorilla gorilla gorilla]
gi|426358141|ref|XP_004046379.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 3 [Gorilla gorilla gorilla]
gi|426358143|ref|XP_004046380.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 4 [Gorilla gorilla gorilla]
gi|426358145|ref|XP_004046381.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 5 [Gorilla gorilla gorilla]
gi|426358147|ref|XP_004046382.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 6 [Gorilla gorilla gorilla]
gi|426358149|ref|XP_004046383.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 7 [Gorilla gorilla gorilla]
gi|426358151|ref|XP_004046384.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 8 [Gorilla gorilla gorilla]
gi|426358153|ref|XP_004046385.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
isoform 9 [Gorilla gorilla gorilla]
gi|417811|sp|Q04837.1|SSBP_HUMAN RecName: Full=Single-stranded DNA-binding protein, mitochondrial;
Short=Mt-SSB; Short=MtSSB; AltName:
Full=PWP1-interacting protein 17; Flags: Precursor
gi|14579006|gb|AAK69112.1|AF277319_1 single-stranded DNA-binding protein [Homo sapiens]
gi|188856|gb|AAA36332.1| single stranded DNA binding protein [Homo sapiens]
gi|12654155|gb|AAH00895.1| SSBP1 protein [Homo sapiens]
gi|51094772|gb|EAL24018.1| single-stranded DNA binding protein 1 [Homo sapiens]
gi|119604384|gb|EAW83978.1| single-stranded DNA binding protein 1, isoform CRA_a [Homo sapiens]
gi|119604387|gb|EAW83981.1| single-stranded DNA binding protein 1, isoform CRA_a [Homo sapiens]
gi|123993391|gb|ABM84297.1| single-stranded DNA binding protein 1 [synthetic construct]
gi|124000367|gb|ABM87692.1| single-stranded DNA binding protein 1 [synthetic construct]
gi|189053614|dbj|BAG35866.1| unnamed protein product [Homo sapiens]
gi|311349738|gb|ADP92054.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349740|gb|ADP92055.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349742|gb|ADP92056.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349744|gb|ADP92057.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349746|gb|ADP92058.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349748|gb|ADP92059.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349750|gb|ADP92060.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349752|gb|ADP92061.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349754|gb|ADP92062.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349756|gb|ADP92063.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349758|gb|ADP92064.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349760|gb|ADP92065.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349762|gb|ADP92066.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349764|gb|ADP92067.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349766|gb|ADP92068.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349768|gb|ADP92069.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349770|gb|ADP92070.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349772|gb|ADP92071.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349774|gb|ADP92072.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349776|gb|ADP92073.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349778|gb|ADP92074.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349780|gb|ADP92075.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349782|gb|ADP92076.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349784|gb|ADP92077.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349786|gb|ADP92078.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349788|gb|ADP92079.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349790|gb|ADP92080.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349792|gb|ADP92081.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349794|gb|ADP92082.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349796|gb|ADP92083.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349798|gb|ADP92084.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349800|gb|ADP92085.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349802|gb|ADP92086.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349804|gb|ADP92087.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349806|gb|ADP92088.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349808|gb|ADP92089.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349810|gb|ADP92090.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349812|gb|ADP92091.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349814|gb|ADP92092.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|311349816|gb|ADP92093.1| single-stranded DNA-binding protein, mitochondrial [Homo sapiens]
gi|410215008|gb|JAA04723.1| single-stranded DNA binding protein 1 [Pan troglodytes]
gi|410251996|gb|JAA13965.1| single-stranded DNA binding protein 1 [Pan troglodytes]
gi|410337241|gb|JAA37567.1| single-stranded DNA binding protein 1 [Pan troglodytes]
gi|410337243|gb|JAA37568.1| single-stranded DNA binding protein 1 [Pan troglodytes]
Length = 148
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ D + D+ + WHRI
Sbjct: 28 RSLNRVHLLGRVGQDPVLRQVEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +Y+EG I+ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRIYLEGKIDYGEYMDKNN 124
>gi|427409105|ref|ZP_18899307.1| single-strand binding protein [Sphingobium yanoikuyae ATCC 51230]
gi|425711238|gb|EKU74253.1| single-strand binding protein [Sphingobium yanoikuyae ATCC 51230]
Length = 208
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K +NG + + T + R+ G + + +WH + +++E
Sbjct: 5 VNKVILIGNLGADPEVKSFQNGGKICNLRIATSESWKDRMSGER--KERTEWHSVVINSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
L A + L K S +Y+EG + R + D+ NG + E+ +
Sbjct: 63 GLVGVAERFLRKGSKIYIEGQLRTRKWQDN-NGNDRYTTEVAL 104
>gi|407769167|ref|ZP_11116544.1| ssDNA-binding protein [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288087|gb|EKF13566.1| ssDNA-binding protein [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 174
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + + GK + FS+ T + R G + + +WHRI V NE
Sbjct: 5 VNKVILVGNLGRDPEIRFTQAGKKIANFSIATSEQWRDRQSGER--RERTEWHRIVVFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVY 170
L + + K S +Y+EG + R +
Sbjct: 63 GLADVVERFVKKGSKLYIEGQLRTRKW 89
>gi|304310043|ref|YP_003809641.1| single-stranded DNA binding protein [gamma proteobacterium HdN1]
gi|301795776|emb|CBL43975.1| single-stranded DNA binding protein [gamma proteobacterium HdN1]
Length = 178
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
G++K I+ G + + P + L +G VT S+ T + + G + +WHR+ N
Sbjct: 5 GINKVILVGNLGNDPETRYLPSGGAVTNISLATSESWRDKETGQ--TQERTEWHRVVFFN 62
Query: 143 ---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
EI G Y L K VYVEG + R + D NG+ + EI
Sbjct: 63 KLAEIAGEY----LRKGGKVYVEGALRTRKWQDQ-NGQDRWSTEIV 103
>gi|110589368|gb|ABG77193.1| single stranded DNA-binding protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 156
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + P + + +G VT +V T + + G + + +WHR+
Sbjct: 11 RGINKVILIGNLGRDPETRYMPSGGAVTNVTVATSDSWKDKNTGEQQ--ERTEWHRVVFF 68
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVY 170
N L A + L K S VYVEG ++ R +
Sbjct: 69 NR-LAEIAAEYLKKGSKVYVEGRLQTRKW 96
>gi|296100686|ref|YP_003610832.1| single-strand DNA-binding protein Ssb [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|419958717|ref|ZP_14474778.1| single-stranded DNA-binding protein [Enterobacter cloacae subsp.
cloacae GS1]
gi|295055145|gb|ADF59883.1| single-strand DNA-binding protein Ssb [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|388606385|gb|EIM35594.1| single-stranded DNA-binding protein [Enterobacter cloacae subsp.
cloacae GS1]
Length = 174
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGT 109
>gi|440289514|ref|YP_007342279.1| single stranded DNA-binding protein [Enterobacteriaceae bacterium
strain FGI 57]
gi|440049036|gb|AGB80094.1| single stranded DNA-binding protein [Enterobacteriaceae bacterium
strain FGI 57]
Length = 176
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGVEKYTTEVVVNVGGT 109
>gi|409398041|ref|ZP_11248893.1| single-stranded DNA-binding protein [Pseudomonas sp. Chol1]
gi|409117547|gb|EKM93975.1| single-stranded DNA-binding protein [Pseudomonas sp. Chol1]
Length = 164
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + L NG VT ++ T + + G L + +WHR+ +
Sbjct: 3 RGVNKVILIGNVGGDPETRYLPNGNAVTNITLATTDSWKDKQTGQ--LQERTEWHRVVLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S Y+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQCYIEGRLQTREW 88
>gi|398820051|ref|ZP_10578591.1| single stranded DNA-binding protein [Bradyrhizobium sp. YR681]
gi|398229309|gb|EJN15391.1| single stranded DNA-binding protein [Bradyrhizobium sp. YR681]
Length = 165
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|383771705|ref|YP_005450770.1| single-strand DNA binding protein RecBCD nuclease [Bradyrhizobium
sp. S23321]
gi|381359828|dbj|BAL76658.1| single-strand DNA binding protein RecBCD nuclease [Bradyrhizobium
sp. S23321]
Length = 165
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|384218709|ref|YP_005609875.1| single-strand DNA-binding protein [Bradyrhizobium japonicum USDA 6]
gi|354957608|dbj|BAL10287.1| single-strand DNA-binding protein [Bradyrhizobium japonicum USDA 6]
Length = 165
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|311275253|ref|XP_003134650.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 1 [Sus scrofa]
Length = 148
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ + D+ + WHRI
Sbjct: 28 RSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLATNEMWRSGENEAYQMGDVSQKTTWHRI 87
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S VYVEG ++ Y D N
Sbjct: 88 SVFRPGLRDVAYQYVKKGSRVYVEGKVDYGEYTDKNN 124
>gi|163760270|ref|ZP_02167353.1| single-strand DNA-binding protein [Hoeflea phototrophica DFL-43]
gi|162282669|gb|EDQ32957.1| single-strand DNA-binding protein [Hoeflea phototrophica DFL-43]
Length = 172
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P K ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILIGNLGADPDIKRTQDGRPIANLSIATSESWRDKNSGER--REKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A L K S VY+EG ++ R + D +G+ K E+ ++
Sbjct: 63 GLCKIAESYLKKGSKVYIEGALQTRKWTDQ-SGQDKYSTEVVLQ 105
>gi|410624524|ref|ZP_11335321.1| single-strand DNA-binding protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410156031|dbj|GAC30695.1| single-strand DNA-binding protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 202
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF-DQRIVGSKDLPKPVQWHRIAV 140
RGV+K I+ G + + P + + NG V S+ T + DQ+ L + +WH++ +
Sbjct: 4 RGVNKVILVGNLGNDPEVRYMPNGNAVANLSIATSESWKDQQ----GQLQEKTEWHKVTM 59
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ EI G Y L K S +Y+EG ++ R + D
Sbjct: 60 YRRLAEIAGEY----LKKGSQIYLEGKLQTRKWQD 90
>gi|410626724|ref|ZP_11337477.1| single-strand DNA-binding protein [Glaciecola mesophila KMM 241]
gi|410153825|dbj|GAC24246.1| single-strand DNA-binding protein [Glaciecola mesophila KMM 241]
Length = 192
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 13/109 (11%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF-DQRIVGSKDLPKPVQWHRIAV 140
RG++K I+ G + P + + NG V S+ T + DQ+ + + +WHR+ +
Sbjct: 3 RGINKVILVGNLGQDPEVRYMPNGNAVANLSIATSESWKDQQ----GQMQERTEWHRLTM 58
Query: 141 HN---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICI 186
+ E+ G Y L K S +YVEG ++ R + D G+ K E+ +
Sbjct: 59 YRRLAEVAGEY----LRKGSQIYVEGKLQTRKWQDQ-QGQDKYTTEVIV 102
>gi|333898870|ref|YP_004472743.1| single-strand binding protein [Pseudomonas fulva 12-X]
gi|333114135|gb|AEF20649.1| single-strand binding protein [Pseudomonas fulva 12-X]
Length = 164
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L +G VT S+ T + + G + + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPETRYLPSGNAVTNLSLATSEQWTDKQTGQR--VEKTEWHRVSLF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYN 171
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREWE 89
>gi|423126882|ref|ZP_17114561.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5250]
gi|376396351|gb|EHT08992.1| single-stranded DNA-binding protein [Klebsiella oxytoca 10-5250]
Length = 175
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGT 109
>gi|326388330|ref|ZP_08209926.1| single-stranded DNA-binding protein [Novosphingobium
nitrogenifigens DSM 19370]
gi|326207062|gb|EGD57883.1| single-stranded DNA-binding protein [Novosphingobium
nitrogenifigens DSM 19370]
Length = 197
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ E
Sbjct: 12 VNKVILVGNLGADPEVRSFQNGGKVCNLRIATSESWKDRNSGER--QERTEWHSVAIFGE 69
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDG 190
L A + L K S +YVEG + R + D NG+ + E+ ++ G
Sbjct: 70 GLVGVAERFLRKGSKIYVEGQLRTRKWQDQ-NGQDRYTTEVVLQGPG 115
>gi|429212604|ref|ZP_19203769.1| single-stranded DNA-binding protein [Pseudomonas sp. M1]
gi|428157086|gb|EKX03634.1| single-stranded DNA-binding protein [Pseudomonas sp. M1]
Length = 165
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G V P + L NG VT ++ T + + G + + +WHR+
Sbjct: 3 RGVNKVILVGNVGGDPETRYLPNGNAVTNVTLATSESWKDKQTGQQQ--ERTEWHRVVFF 60
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
L + + K S +YVEG + R + +G+ + EI + +GN
Sbjct: 61 GR-LAEIVAEYVRKGSQIYVEGSLRTRKWQGQ-DGQDRYTTEIVVDINGN 108
>gi|27379809|ref|NP_771338.1| single-stranded DNA-binding protein [Bradyrhizobium japonicum USDA
110]
gi|37999424|sp|Q89L50.1|SSB_BRAJA RecName: Full=Single-stranded DNA-binding protein; Short=SSB;
AltName: Full=Helix-destabilizing protein
gi|27352962|dbj|BAC49963.1| single-strand DNA binding protein [Bradyrhizobium japonicum USDA
110]
Length = 164
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + ++G+ + S+ T + + G + + +WHR+ + NE
Sbjct: 5 VNKVILVGNLGKDPEIRRTQDGRPIANLSIATSETWRDKNSGERK--EKTEWHRVVIFNE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K + VY+EG ++ R + D
Sbjct: 63 GLCKVAEQYLKKGAKVYIEGALQTRKWTD 91
>gi|334123874|ref|ZP_08497888.1| single-strand binding protein [Enterobacter hormaechei ATCC 49162]
gi|333389852|gb|EGK61008.1| single-strand binding protein [Enterobacter hormaechei ATCC 49162]
Length = 176
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + +G V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATG--EMKEQTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K S VY+EG + R + D +G+ K E+ + G
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLRTRKWTDQ-SGQEKYTTEVVVNVGGT 109
>gi|153835212|ref|ZP_01987879.1| single-stranded DNA-binding protein [Vibrio harveyi HY01]
gi|148868322|gb|EDL67450.1| single-stranded DNA-binding protein [Vibrio harveyi HY01]
Length = 168
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + +WHR+ +
Sbjct: 4 RGINKVILAGNLGNDPEVRYMPNGGAVANITIATSDQWRDKATGEPR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
+ L A + L K S VY+EG ++ R + D
Sbjct: 62 GK-LAEVAGEYLKKGSQVYIEGQMQTRKWQD 91
>gi|381401598|ref|ZP_09926496.1| single-stranded binding protein [Kingella kingae PYKK081]
gi|380833452|gb|EIC13322.1| single-stranded binding protein [Kingella kingae PYKK081]
Length = 173
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G++ P + + NG V FSV T + R G + + +WH I ++
Sbjct: 3 LNKVMLIGRLGRDPETRYMPNGDAVCNFSVATSENWTDRNNGQRQ--ERTEWHNITMYRR 60
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEIC 185
A + L K S VY+EG I+ R Y D E +C
Sbjct: 61 -QAEIAAQYLRKGSQVYLEGKIQSRKYTDKTGAERTAYDIVC 101
>gi|149202689|ref|ZP_01879661.1| single-strand binding protein [Roseovarius sp. TM1035]
gi|149143971|gb|EDM32005.1| single-strand binding protein [Roseovarius sp. TM1035]
Length = 171
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPEVRTFQNGGKVCNLRIATSETWKDRNSGERR--ERTEWHTVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S VY+EG ++ R + D +G+ K EI ++
Sbjct: 63 GLVRVAEQYLRKGSKVYLEGKLQTRKWQDQ-SGQDKYSTEIVLQ 105
>gi|432663345|ref|ZP_19898963.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
gi|431195782|gb|ELE94745.1| single-stranded DNA-binding protein [Escherichia coli KTE111]
Length = 180
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + + NG V ++ T + + G ++ + +WHR+ +
Sbjct: 4 RGVNKVILVGHLGQDPEVRYMPNGGAVANLTLATSETWRDKQTG--EMRENTEWHRVVMF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
+ L A + L K + VY+EG + R + D G + + E+ + ++G
Sbjct: 62 GK-LAEVAGEYLRKGAQVYIEGQLRTRNWQDDA-GVTRYVTEVLVGQNGT 109
>gi|341615913|ref|ZP_08702782.1| single-strand binding protein [Citromicrobium sp. JLT1363]
Length = 179
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
++K ++ G + P + +NG V + T + R G + + +WH +A+ +E
Sbjct: 5 LNKVMLIGNLGADPEIRSFQNGGKVANLRIATSETWKDRNTGER--QERTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L + + L K S VY+EG ++ R + D NG+ + E+ +R
Sbjct: 63 GLVNVVERFLKKGSKVYIEGKLQTRKWQDQ-NGQDRYSTEVVLR 105
>gi|301772618|ref|XP_002921720.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
isoform 1 [Ailuropoda melanoleuca]
Length = 138
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 56 DVFDDFVVEKQELQPQGVDPRRGWGFRGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGT 115
VF FV + E+ V R +++ + G+V PV + + VTIFS+ T
Sbjct: 8 QVFHQFVRRESEVASSLVLER------SLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLAT 61
Query: 116 GGLF---DQRIVGSKDLPKPVQWHRIAVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
++ + D+ + WHRI+V L A + + K S +YVEG ++ Y D
Sbjct: 62 NEMWRSGENEAYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTD 121
Query: 173 SIN 175
N
Sbjct: 122 KNN 124
>gi|407800425|ref|ZP_11147287.1| single-stranded DNA-binding protein (SSB) [Oceaniovalibus
guishaninsula JLT2003]
gi|407057654|gb|EKE43628.1| single-stranded DNA-binding protein (SSB) [Oceaniovalibus
guishaninsula JLT2003]
Length = 168
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 84 VHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHNE 143
V+K I+ G + P + NG V + T + + G + + +WH +A+ +E
Sbjct: 5 VNKVILIGNLGRDPEVRTFGNGGKVCNLRIATSETWKDKNSGERR--EKTEWHSVAIFSE 62
Query: 144 ILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
L A + L K S +YVEG +E R + D +G+ + E+ +R
Sbjct: 63 PLVRVAEQYLKKGSKIYVEGQLETRKWQDQ-SGQDRYSTEVVLR 105
>gi|422405106|ref|ZP_16482153.1| single-stranded DNA-binding protein, partial [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330879410|gb|EGH13559.1| single-stranded DNA-binding protein [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 102
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G P + L NG VT S+ T + + G K + +WHR+++
Sbjct: 3 RGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQK--VEKTEWHRVSMF 60
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVY 170
EI G Y L K S VY+EG ++ R +
Sbjct: 61 GKVAEIAGEY----LRKGSQVYIEGKLQTREW 88
>gi|451976279|ref|ZP_21927443.1| single-stranded DNA-binding protein [Vibrio alginolyticus E0666]
gi|451929789|gb|EMD77519.1| single-stranded DNA-binding protein [Vibrio alginolyticus E0666]
Length = 177
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSDSWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|262393136|ref|YP_003284990.1| single-stranded DNA-binding protein [Vibrio sp. Ex25]
gi|262336730|gb|ACY50525.1| single-stranded DNA-binding protein [Vibrio sp. Ex25]
Length = 178
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSDSWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|354598994|ref|ZP_09017011.1| single-strand binding protein [Brenneria sp. EniD312]
gi|353676929|gb|EHD22962.1| single-strand binding protein [Brenneria sp. EniD312]
Length = 180
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RGV+K I+ G + P + L G V S+ T + + G + + +WHR+ +
Sbjct: 4 RGVNKVILVGFLGQDPEIRYLPAGSAVATLSLATSETWRDKQSGEQK--EKTEWHRVVLF 61
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIRRDGN 191
EI G Y L K S VY+EG ++ R + D +G+ + E+ + G
Sbjct: 62 GKLAEIAGEY----LRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVSMGGT 109
>gi|338214007|ref|YP_004658064.1| single-strand binding protein [Runella slithyformis DSM 19594]
gi|336307830|gb|AEI50932.1| single-strand binding protein [Runella slithyformis DSM 19594]
Length = 158
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P + L NG V F++ T + R S + + +WHRI + +
Sbjct: 3 GVNKVILLGNLGSDPEVRHLENGSAVARFNIATSEAYTNR---SGERVEQTEWHRIELWD 59
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYND 172
L A + L K ++VY+EG + + D
Sbjct: 60 N-LAKIAEQYLRKGNTVYIEGKLRTETWTD 88
>gi|91225639|ref|ZP_01260713.1| single-strand DNA-binding protein [Vibrio alginolyticus 12G01]
gi|91189759|gb|EAS76033.1| single-strand DNA-binding protein [Vibrio alginolyticus 12G01]
Length = 179
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVH 141
RG++K I+ G + + P + + NG V ++ T + + G + + +WHR+ +
Sbjct: 4 RGINKVILVGNLGNDPEIRYMPNGGAVANITIATSDSWRDKATGEQR--EKTEWHRVVLF 61
Query: 142 NEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEICIR 187
+ L A + L K S VY+EG ++ R + D +G+ + E+ ++
Sbjct: 62 GK-LAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-SGQDRYSTEVVVQ 105
>gi|113461272|ref|YP_719341.1| single-stranded DNA-binding protein [Haemophilus somnus 129PT]
gi|170717262|ref|YP_001784378.1| single-stranded DNA-binding protein [Haemophilus somnus 2336]
gi|112823315|gb|ABI25404.1| single-strand binding protein [Haemophilus somnus 129PT]
gi|168825391|gb|ACA30762.1| single-strand binding protein [Haemophilus somnus 2336]
Length = 154
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTG-GLFDQRIVGSKDLPKPVQWHRIAVH 141
GV+K II G + + P + + NG V SV T D+ +++ +WHRI +
Sbjct: 3 GVNKVIIVGNLGNAPEIRTMPNGDAVANISVATSESWIDKNTNERREI---TEWHRIVFY 59
Query: 142 N---EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGEVKNIPEI 184
E+ G Y L K S VYVEG + R + D NG+ + EI
Sbjct: 60 RRQAEVAGEY----LRKGSKVYVEGRLRTRKWQDQ-NGQDRYTTEI 100
>gi|431911644|gb|ELK13792.1| Wee1-like protein kinase 2 [Pteropus alecto]
Length = 701
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 82 RGVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLF---DQRIVGSKDLPKPVQWHRI 138
R +++ + G+V PV + + VTIFS+ T ++ + D+ + WHRI
Sbjct: 567 RSLNRVQLLGRVGQDPVMRQIEGKNPVTIFSLATNEMWKSGENEAYQMGDVSQKTTWHRI 626
Query: 139 AVHNEILGSYAVKQLVKNSSVYVEGDIEIRVYNDSIN 175
+V L A + + K S +YVEG ++ Y D N
Sbjct: 627 SVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYTDKNN 663
>gi|88607732|ref|YP_505066.1| single-strand binding protein [Anaplasma phagocytophilum HZ]
gi|88598795|gb|ABD44265.1| single-strand binding protein [Anaplasma phagocytophilum HZ]
Length = 159
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 83 GVHKAIICGKVKDTPVQKILRNGKTVTIFSVGTGGLFDQRIVGSKDLPKPVQWHRIAVHN 142
GV+K I+ G + P ++++NGK + FS+ T + + GS+ + +WH I V +
Sbjct: 5 GVNKVILIGYLGKDPDVRVMQNGKEMANFSLATSESWLDKASGSR--TEKTEWHNIVVFS 62
Query: 143 EILGSYAVKQLVKNSSVYVEGDIEIRVYNDSINGE 177
E L K S VY+EG + R + D N +
Sbjct: 63 EGLVKVVKTCARKGSKVYLEGSLRTRKWVDQNNND 97
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,235,999,079
Number of Sequences: 23463169
Number of extensions: 142767624
Number of successful extensions: 318845
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 1786
Number of HSP's that attempted gapping in prelim test: 317865
Number of HSP's gapped (non-prelim): 2193
length of query: 194
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 59
effective length of database: 9,191,667,552
effective search space: 542308385568
effective search space used: 542308385568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)