BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029356
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3V384|LACE1_MOUSE Lactation elevated protein 1 OS=Mus musculus GN=Lace1 PE=2 SV=1
Length = 480
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 1 MTSAQQGFYFVGKGSSEVMKQKFRDLIGEHE---AGPQEVEVVMGRKLQVPLGANGCAYF 57
+ A + +Y + E + K D + + + P+ ++V GR+L++ A
Sbjct: 288 LAPAGKLYYLTSEADVEAVVDKLFDELAQKQNDLTSPRILKV-QGRELRLNKACGSVADC 346
Query: 58 EFEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAYRFVTLVDVMYENRARLLC 117
FEELC++PLGA+DY L K F T+ + IP F L RT A RF+TL+D Y+ + R++C
Sbjct: 347 TFEELCERPLGASDYLELSKNFDTVIIRNIPQFSLAKRTQARRFITLIDNFYDFKVRIIC 406
Query: 118 TAEGSPFQLFNKIVTISDAQQMAPRTSSRSMRNDEADLCV--DNELGFAKDRTISRLTEM 175
+A LF S++ Q + D A L + E FA RTISRLTEM
Sbjct: 407 SASAPISSLFLHQHQDSESDQSRILMDDLGLSQDSAGLSMFTGEEEIFAFQRTISRLTEM 466
Query: 176 NSKEY 180
+++Y
Sbjct: 467 QTEQY 471
>sp|Q8WV93|LACE1_HUMAN Lactation elevated protein 1 OS=Homo sapiens GN=LACE1 PE=2 SV=2
Length = 481
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 5/188 (2%)
Query: 1 MTSAQQGFYFVGKGSSEVMKQKFRDLIGEHEAGPQEVEV--VMGRKLQVPLGANGCAYFE 58
+ +A + +Y + E + K D + + + + V GR+L++ A
Sbjct: 288 LPAAGKLYYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGTVADCT 347
Query: 59 FEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAYRFVTLVDVMYENRARLLCT 118
FEELC++PLGA+DY L K F T+ L IP F L NRT RF+TL+D Y+ + R++C+
Sbjct: 348 FEELCERPLGASDYLELSKNFDTIFLRNIPQFTLANRTQGRRFITLIDNFYDLKVRIICS 407
Query: 119 AEGSPFQLFNKIVTISDAQQMAPRTSSRSMRNDEAD---LCVDNELGFAKDRTISRLTEM 175
A LF S+ +Q + D A+ + E FA RTISRLTEM
Sbjct: 408 ASTPISSLFLHQHHDSELEQSRILMDDLGLSQDSAEGLSMFTGEEEIFAFQRTISRLTEM 467
Query: 176 NSKEYLEQ 183
+++Y +
Sbjct: 468 QTEQYWNE 475
>sp|P46441|N2B_HAEIR Putative ATPase N2B OS=Haematobia irritans PE=2 SV=1
Length = 464
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 59 FEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAYRFVTLVDVMYENRARLLCT 118
FEELC++PLG +DY + + FHT+ + +P L ++ RF+TL+D +Y+NR R++ +
Sbjct: 332 FEELCNRPLGGSDYIQIGQFFHTVLIHDVPQLTLLLKSQMRRFITLIDTLYDNRVRVVIS 391
Query: 119 AEGSPFQLF---NKIVTISDAQQMAPRTSSRSMRNDEADLCVDNELGFAKDRTISRLTEM 175
AE QLF +K ++D Q+M + A + E FA DRTISRL EM
Sbjct: 392 AEVPLDQLFSFTDKPKDLADEQRMLMDDLKLGDTDTSASVFTGEEEMFAFDRTISRLYEM 451
Query: 176 NSKEYLEQHA 185
KEY EQ A
Sbjct: 452 QKKEYWEQWA 461
>sp|Q32PX9|LACE1_RAT Lactation elevated protein 1 OS=Rattus norvegicus GN=Lace1 PE=2
SV=1
Length = 480
Score = 90.5 bits (223), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Query: 1 MTSAQQGFYFVGKGSSEVMKQKFRDLIGEHE---AGPQEVEVVMGRKLQVPLGANGCAYF 57
+T A + +Y + + K D + + + P+ ++V GR+L++ A
Sbjct: 288 LTPAGKLYYLTSEADVGTVMDKLFDELAQKQNDLTSPRILKV-QGRELRLNKACGTVADC 346
Query: 58 EFEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAYRFVTLVDVMYENRARLLC 117
FEELC++PLGA+DY L K F T+ + IP F L RT RF+TL+D Y+ + R++C
Sbjct: 347 TFEELCERPLGASDYLELSKNFDTVIIRNIPQFSLAKRTQVRRFITLIDNFYDFKVRIIC 406
Query: 118 TAEGSPFQLFNKIVTISDAQQMAPRTSSRSMRNDEADLCV--DNELGFAKDRTISRLTEM 175
+A LF S++ Q + D A L + E F+ RT+SRLTEM
Sbjct: 407 SASVPISSLFVYQHQDSESDQSRVLMDDLGLSQDSAGLSMFTGEEEIFSFQRTLSRLTEM 466
Query: 176 NSKEY 180
+++Y
Sbjct: 467 QTEQY 471
>sp|O42895|YBQ2_SCHPO Uncharacterized protein C115.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC115.02c PE=3 SV=1
Length = 454
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 22/194 (11%)
Query: 1 MTSAQQGFYFVGKGSSEVMK---QKFRDLIGEHEAGPQEVEVVMGRKLQVPLGANGCAYF 57
+ S + Y S EV K F E + Q+ V GRK+ VP + A+F
Sbjct: 269 LKSKTEDTYLYPANSPEVKKALENWFLCYADEKDPAHQDEVEVFGRKIIVPKASGNVAWF 328
Query: 58 EFEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAYRFVTLVDVMYENRARLLC 117
FE+LC +P AADY L +H + IP + ++ +RF+T +D +Y+ +L+
Sbjct: 329 TFEQLCGEPKSAADYLSLASRYHVFIVSDIPKLSIESKDLIHRFITFIDALYDTHGKLIL 388
Query: 118 TAEGSPFQLFNKIVTISDAQQMAPRTSSRSMRNDEADLCVDN---------ELGFAKDRT 168
++E V + + AP S + A +++ E F R
Sbjct: 389 SSE----------VPVQEIYPTAPSEVLSSTADPAAKGKIESHYHGAFGGIEEVFTFTRC 438
Query: 169 ISRLTEMNSKEYLE 182
+SRL+EM + ++
Sbjct: 439 LSRLSEMKKQSWIH 452
>sp|Q5TYS0|LCE1B_DANRE Lactation elevated protein 1 homolog B OS=Danio rerio GN=lace1b
PE=2 SV=1
Length = 503
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 40 VMGRKLQVPLGANGCAYFEFEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAY 99
V GR++ + A F+ELC++PLGA DY + + F T+ + +P L + A
Sbjct: 351 VQGREVTLSRTCGTIADCSFQELCEQPLGAGDYLEIARCFDTVIIRNVPYLQLGMKDQAR 410
Query: 100 RFVTLVDVMYENRARLLCTAEGSPFQLFNKIVTISDAQQMAPRTSSRSMRN-----DEAD 154
RF TL+D Y+ + R++ A+ +L ++ Q R M + DEA
Sbjct: 411 RFTTLIDNFYDQKVRVVMLADAPLDRLLDQ------GQMTGEEARDRLMLDELGLTDEAS 464
Query: 155 ----LCVDNELGFAKDRTISRLTEMNSKEY 180
L +E FA RT+SRL EM +++Y
Sbjct: 465 KRITLFTADEEIFAFQRTVSRLAEMQTEQY 494
>sp|P32317|AFG1_YEAST Protein AFG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=AFG1 PE=1 SV=1
Length = 509
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 27/168 (16%)
Query: 39 VVMGRKLQVP-LGANGCAYFEFEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTA 97
+ GR+ +VP A F F++LC +PL A DY L K F + IP ++ R
Sbjct: 343 TIWGREFKVPKCTPPRVAQFTFKQLCGEPLAAGDYLTLAKNFEAFIVTDIPYLSIYVRDE 402
Query: 98 AYRFVTLVDVMYENRARLLCTAEGSPFQLFNKIVTISDAQQMAPRTSSRSMRNDEADLCV 157
RF+T +D +Y++ +L T LF + I + ++ P T D D +
Sbjct: 403 VRRFITFLDAVYDSGGKLATTGAADFSSLFVEPEQILNDFELRPTTKE----PDSVDTGM 458
Query: 158 DNEL----GFAKD------------------RTISRLTEMNSKEYLEQ 183
+E+ GF+K+ R +SRL++M+S +++ +
Sbjct: 459 VDEMVEKHGFSKEIAKKSQMFALDEERFAFARALSRLSQMSSTDWVTK 506
>sp|P64612|YHCM_ECOLI Uncharacterized protein YhcM OS=Escherichia coli (strain K12)
GN=yhcM PE=1 SV=1
Length = 375
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 29/132 (21%)
Query: 52 NGCAYFEFEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAYRFVTLVDVMYEN 111
N F LC DY L ++FHT+ L +P+ + A RF+ LVD YE
Sbjct: 268 NQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYER 327
Query: 112 RARLLCTAEGSPFQLFNKIVTISDAQQMAPRTSSRSMRNDEADLCVDNELGFAKDRTISR 171
+L+ +AE ++++ + L F R +SR
Sbjct: 328 HVKLVVSAEVPLYEIYQ-----------------------------GDRLKFEFQRCLSR 358
Query: 172 LTEMNSKEYLEQ 183
L EM S+EYL++
Sbjct: 359 LQEMQSEEYLKR 370
>sp|P64613|YHCM_ECO57 Uncharacterized protein YhcM OS=Escherichia coli O157:H7 GN=yhcM
PE=3 SV=1
Length = 375
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 29/132 (21%)
Query: 52 NGCAYFEFEELCDKPLGAADYFGLFKIFHTLALEGIPIFGLHNRTAAYRFVTLVDVMYEN 111
N F LC DY L ++FHT+ L +P+ + A RF+ LVD YE
Sbjct: 268 NQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYER 327
Query: 112 RARLLCTAEGSPFQLFNKIVTISDAQQMAPRTSSRSMRNDEADLCVDNELGFAKDRTISR 171
+L+ +AE ++++ + L F R +SR
Sbjct: 328 HVKLVVSAEVPLYEIYQ-----------------------------GDRLKFEFQRCLSR 358
Query: 172 LTEMNSKEYLEQ 183
L EM S+EYL++
Sbjct: 359 LQEMQSEEYLKR 370
>sp|B9DRV0|ADDA_STRU0 ATP-dependent helicase/nuclease subunit A OS=Streptococcus uberis
(strain ATCC BAA-854 / 0140J) GN=addA PE=3 SV=1
Length = 1220
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 1 MTSAQQGFYFVGKGSSEVMKQKF 23
MT A++ Y +GKGS E + QKF
Sbjct: 891 MTRAEKKLYLIGKGSQEKLSQKF 913
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,920,925
Number of Sequences: 539616
Number of extensions: 2555168
Number of successful extensions: 5124
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5107
Number of HSP's gapped (non-prelim): 12
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)