BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029358
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 40 KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFG----GSFESKTRTPCMLLLDSLEM 95
+V W K +F K Y+ +PI C HW+L+I+C+ G E+ R PC+L LDS++
Sbjct: 375 RVQKWTKNVDLFEKDYIFIPINCSFHWSLVIICHPGELVPSHVENPQRVPCILHLDSIKG 434
Query: 96 SNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVP---KVPQQRNGEECGNFVLYFI 152
S+ ++ + +KA T + SR P + ++PQQ N +CG F+L+++
Sbjct: 435 SHKGGLINIFPSYLREEWKARHENTTNDS-SRAPNMQSISLELPQQENSFDCGLFLLHYL 493
Query: 153 NLFVEGAPENFN---LEDYPYFMEKNWFTAED 181
+LFV AP FN + F+ +NWF A++
Sbjct: 494 DLFVAQAPAKFNPSLISRSANFLTRNWFPAKE 525
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 89/168 (52%), Gaps = 21/168 (12%)
Query: 30 DLYRKPSSKA-------KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGG------ 76
DL + PSS A +V W ++ +F K Y+ VP+ HW+L+++C+ G
Sbjct: 447 DLDKDPSSIADGKAAFLRVRKWTRKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTD 506
Query: 77 -SFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISR---IPLLV 132
+ + PC+L +DS++ S+ + ++ ++ + +K + + ++ SR + +
Sbjct: 507 LDLDDSKKVPCILHMDSIKGSHAG-LKNLVQTYLCEEWKERHKETSDDISSRFMNLRFVS 565
Query: 133 PKVPQQRNGEECGNFVLYFINLFVEGAPENFN---LEDYPYFMEKNWF 177
++PQQ N +CG F+L+++ LF+ AP NF+ + + F+ NWF
Sbjct: 566 LELPQQENSFDCGLFLLHYLELFLAEAPLNFSPFKIYNASNFLYLNWF 613
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 44 WIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWRFEP 103
W K +F K Y+ +PI HW+L+I+C ES +L LDSL + +
Sbjct: 417 WWKGIDLFRKAYIFIPIHEDLHWSLVIVCIPDKKDESGL---TILHLDSLGLHSRKSIVE 473
Query: 104 DIRKFVMDIYK-------AEDRPET----KELISRIPLLVPKVPQQRNGEECGNFVLYFI 152
++++F+ D + + D P + K L RI V +VPQQ+N +CG FVL+FI
Sbjct: 474 NVKRFLKDEWNYLNQDDYSLDLPISEKVWKNLPRRISEAVVQVPQQKNDFDCGPFVLFFI 533
Query: 153 NLFVEGAPENFNLEDYPYFMEKNWFTAEDLDCF 185
F+E AP+ +D F +K WF ++
Sbjct: 534 KRFIEEAPQRLKRKDLGMF-DKKWFRPDEASAL 565
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 14/157 (8%)
Query: 39 AKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNP 98
K W K +F K Y+ +PI HW+L+I+C ES ++ LDSL +
Sbjct: 400 VKFRRWWKGFDLFCKSYIFIPIHEDLHWSLVIICIPDKEDESGL---TIIHLDSLGLHPR 456
Query: 99 WRFEPDIRKFVMDI--YKAEDRPETKELISRIPLLVP--------KVPQQRNGEECGNFV 148
++++F+ + Y +D P + +++ +P +VPQQ+N +CG F+
Sbjct: 457 NLIFNNVKRFLREEWNYLNQDAPLDLPISAKVWRDLPNMINEAEVQVPQQKNDFDCGLFL 516
Query: 149 LYFINLFVEGAPENFNLEDYPYFMEKNWFTAEDLDCF 185
L+FI F+E AP+ L+D + K WF E+
Sbjct: 517 LFFIRRFIEEAPQRLTLQDL-KMIHKKWFKPEEASAL 552
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 53.9 bits (128), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 32/149 (21%)
Query: 41 VLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFG-----------------GSFE---- 79
V W ++ +F KKY++VPI HW L I+CN S E
Sbjct: 416 VRKWTQKVDLFHKKYIIVPINETFHWYLAIICNIDRLMPVDTKLEEQDEIVMSSVEQPSA 475
Query: 80 SKTR-------TPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLV 132
SKTR +P +L+ DSL + +R+++++ +A +R + I
Sbjct: 476 SKTRQAELTSNSPAILIFDSLANLHKGALNY-LREYLLE--EAFERKNVHLKSTDIRGFH 532
Query: 133 PKVPQQRNGEECGNFVLYFINLFVEGAPE 161
KVPQQ N +CG + L+F+ LF+E PE
Sbjct: 533 AKVPQQSNFSDCGIYALHFVELFLE-TPE 560
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 57/191 (29%)
Query: 40 KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILC--------------------------- 72
+V TW + +IF+K Y+ VP+ HW L ++C
Sbjct: 822 RVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQEFQDQQSQH 881
Query: 73 --------------NFGGSFESKT------------RTPCMLLLDSLEMSNPWRFEPDIR 106
F + ES++ + PC+L+LDSL+ ++ ++R
Sbjct: 882 DNKTIDNDPHTTSTVFTSAEESQSTETSMSVPKKMCKRPCILILDSLKAASIQNTVQNLR 941
Query: 107 KFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLE 166
+++ ++ + + + + + L PKVP+Q N +CG ++L ++ F + NF L
Sbjct: 942 EYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFQDPIVNFEL- 1000
Query: 167 DYPYFMEKNWF 177
P +EK WF
Sbjct: 1001 --PIHLEK-WF 1008
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 57/191 (29%)
Query: 40 KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILC--------------------------N 73
+V TW + +IF+K Y+ VP+ HW L ++C N
Sbjct: 835 RVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEAVYEDFPQTVSQQSQAQQSQN 894
Query: 74 FGGSFESKTRT---------------------------PCMLLLDSLEMSNPWRFEPDIR 106
+ ++ RT PC+L+LDSL+ ++ ++R
Sbjct: 895 DNKTIDNDLRTTSTLSLSAEDSQSTESNMSVPKKMCKRPCILILDSLKAASVQNTVQNLR 954
Query: 107 KFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLE 166
+++ ++ + + + + + L PKVP+Q N +CG ++L ++ F + NF L
Sbjct: 955 EYLEVEWEVKLKTHRQFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFEL- 1013
Query: 167 DYPYFMEKNWF 177
P +EK WF
Sbjct: 1014 --PIHLEK-WF 1021
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 57/191 (29%)
Query: 40 KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILC----------NF--------------- 74
+V TW + +IF+K Y+ VP+ HW L ++C +F
Sbjct: 832 RVRTWTRHINIFNKDYIFVPVNESSHWYLAVICFPWLEEVVYEDFPQTIPQYSQAEESHH 891
Query: 75 ----------------GGSFESKT------------RTPCMLLLDSLEMSNPWRFEPDIR 106
G+ +S++ + PC+L+LDSL+ ++ ++R
Sbjct: 892 DSRTIDNDLHTSSALSSGTEDSQSPEMNVTVPKKMCKRPCILILDSLKAASIQNTVQNLR 951
Query: 107 KFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLE 166
+++ ++ + + + + + L PKVP+Q N +CG ++L ++ F + NF L
Sbjct: 952 EYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSSDCGVYLLQYVESFFKDPIVNFEL- 1010
Query: 167 DYPYFMEKNWF 177
P +EK WF
Sbjct: 1011 --PIHLEK-WF 1018
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
Query: 17 KKAGFTYLDSLWFDLYRKPSSKA--KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNF 74
KK G+ L +L Y K S V W K ++F ++ VLVPI HW+L+++
Sbjct: 427 KKQGYPALHALSTFFYPKLKSGGYQAVKRWTKGVNLFDQELVLVPIHRKVHWSLVVM--- 483
Query: 75 GGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELI-SRIPLLVP 133
R C+ LDS+ R + +++ D K + + L + +
Sbjct: 484 ------DLRKKCLKYLDSMGQKG-HRICEILLQYLQDESKTKRNTDLNLLEWTHYSMKPH 536
Query: 134 KVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 174
++PQQ NG +CG F + + P F P F +K
Sbjct: 537 EIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 577
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 56 VLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKA 115
+ VPI HW L ++ N R +L LDSL +P + K++ D +A
Sbjct: 371 IFVPIHRGVHWTLAVINN---------RESKLLYLDSLNGVDPMILNA-LAKYMGD--EA 418
Query: 116 EDRPETKELISRIPL-LVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYF 171
++ K + + V +PQQ+NG +CG F+L +I+ F G F+ E PYF
Sbjct: 419 NEKSGKKIDANSWDMEFVEDLPQQKNGYDCGMFMLKYIDFFSRGLGLCFSQEHMPYF 475
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 41 VLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWR 100
V W K+ +F K +L+PI HW+L+ + + S+ + DS + +
Sbjct: 616 VKRWTKKVDLFKKSLLLIPIHLEVHWSLITV-----TLSSRI----ISFYDSQGIHFKFC 666
Query: 101 FEPDIRKFVMDIYKAEDRPETKELISRIPLLVPK-VPQQRNGEECGNFVLYFINLFVEGA 159
E +IRK+++ + ++RPE + V K +PQQ+N +CG FVL +
Sbjct: 667 VE-NIRKYLLTEAREKNRPE---FLQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLALEQ 722
Query: 160 PENFNLEDYP 169
P F+ ED P
Sbjct: 723 PFQFSQEDMP 732
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 13/162 (8%)
Query: 16 DKKAGFTYLDSLWFDLYRKPSSKA--KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCN 73
KK G+ L + Y K S V W K ++F ++ VLVPI HW+L+++
Sbjct: 426 SKKQGYPALHAFSTFFYPKLKSGGYQAVKRWTKGVNLFEQELVLVPIHRKVHWSLVVM-- 483
Query: 74 FGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELI-SRIPLLV 132
R C+ LDS+ R + +++ D K + + L + +
Sbjct: 484 -------DLRKKCLKYLDSMGQKG-HRICEILLQYLQDESKTKRNTDLNLLEWTHYSMKP 535
Query: 133 PKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 174
++PQQ NG +CG F + + P F P F +K
Sbjct: 536 HEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 577
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Query: 16 DKKAGFTYLD--SLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCN 73
+KK G+ L S +F K V W K ++F ++ +LVPI HW+L+++
Sbjct: 427 NKKQGYPALHVFSTFFYPKLKSGGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI-- 484
Query: 74 FGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVP 133
R C+ LDS+ R + +++ D K + + L + P
Sbjct: 485 -------DLRKKCLKYLDSMGQKG-HRICEILLQYLQDESKTKRNSDLNLLEWTHHSMKP 536
Query: 134 -KVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 174
++PQQ NG +CG F + + P F P F +K
Sbjct: 537 HEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 578
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 39 AKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGG---------------SFESKTR 83
+ V W+ +FSKKYV++PI HW I+ N S E
Sbjct: 505 SNVKKWVNNTDLFSKKYVVIPINISYHWFSCIITNLDAILDFHQNKDKNDAINSDEISIN 564
Query: 84 TPC--MLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNG 141
P +L DSL ++ +P I++F+ I A D+ + ++I + VPQQ N
Sbjct: 565 NPLVNILTFDSLRQTHSREIDP-IKEFL--ISYALDKYSIQLDKTQIKMKTCPVPQQPNM 621
Query: 142 EECGNFVLYFINLFVEGAPENFNL 165
+CG V+ I F E E ++
Sbjct: 622 SDCGVHVILNIRKFFENPVETIDV 645
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 41 VLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWR 100
V W K+ +F K +L+PI HW+L+ + + DS + +
Sbjct: 622 VKRWTKKVDLFKKSLLLIPIHLEVHWSLITVT---------LSNRIISFYDSQGIHFKFC 672
Query: 101 FEPDIRKFVMDIYKAEDRPETKELISRIPLLVPK-VPQQRNGEECGNFVLYFINLFVEGA 159
E +IRK+++ + ++RPE + V K +PQQ+N +CG FVL +
Sbjct: 673 VE-NIRKYLLTEAREKNRPE---FLQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLALEQ 728
Query: 160 PENFNLEDYP 169
P F+ ED P
Sbjct: 729 PFQFSQEDMP 738
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 41 VLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWR 100
V W K+ +F K +L+PI HW+L+ + + DS + +
Sbjct: 622 VKRWTKKVDLFKKSLLLIPIHLEVHWSLITVT---------LSNRIISFYDSQGIHFKFC 672
Query: 101 FEPDIRKFVMDIYKAEDRPETKELISRIPLLVPK-VPQQRNGEECGNFVLYFINLFVEGA 159
E +IRK+++ + ++RPE + V K +PQQ+N +CG FVL +
Sbjct: 673 VE-NIRKYLLTEAREKNRPE---FLQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLALEQ 728
Query: 160 PENFNLEDYP 169
P F+ ED P
Sbjct: 729 PFQFSQEDMP 738
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Query: 16 DKKAGFTYLD--SLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCN 73
+KK G+ L S +F K V W K ++F ++ +LVPI HW+L+++
Sbjct: 427 NKKQGYPALHVFSTFFYPKLKSGGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI-- 484
Query: 74 FGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELI-SRIPLLV 132
R C+ LDS+ R + +++ D K + + L + +
Sbjct: 485 -------DLRKKCLKYLDSMGQKG-HRICEILLQYLQDESKTKRNIDLNLLEWTHYSMKP 536
Query: 133 PKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 174
++PQQ NG +CG F + + P F P F +K
Sbjct: 537 HEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKK 578
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 56 VLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKA 115
+ VPI HW L ++ N R + LDSL + K+++D K
Sbjct: 222 IFVPIHIDIHWTLGVINN---------RERKFVYLDSLFTGVGHTILNAMAKYLVDEVKQ 272
Query: 116 EDRPETKELISRIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYF 171
+ + ++ S V + PQQ+NG +CG F+L +I+ + G F+ +D PYF
Sbjct: 273 KSQKNI-DVSSWGMEYVEERPQQQNGYDCGMFMLKYIDFYSRGLSLQFSQKDMPYF 327
>sp|Q09275|ULP4_CAEEL Putative thiol protease ulp-4 OS=Caenorhabditis elegans GN=ulp-4
PE=3 SV=2
Length = 382
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 55 YVLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYK 114
Y++VP+ W HW+L ++C+ F ++ RT + +++N I F+ Y
Sbjct: 225 YIVVPVNEWEHWSLAVICH---PFTAQARTVIFDSQLTADLNNLQNMATLIESFMK--YS 279
Query: 115 AEDRPETKELISRIPLLVP-KVPQQRNGEECGNFVLYFINLFVEGAP---ENFNL-EDYP 169
E R + +P ++P ++PQQ N +CG F+ F F+ P +NF+ +YP
Sbjct: 280 YEKRT-GNAMPFPLPCILPQRMPQQTNNFDCGIFIAEFARRFLLSPPKDLDNFDFAREYP 338
Query: 170 YF 171
F
Sbjct: 339 DF 340
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 21/147 (14%)
Query: 34 KPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLIL------CNFGGSFESKTRTPCM 87
K + V W K+ +FS +LVPI HW L ++ + S C
Sbjct: 503 KTAGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACR 562
Query: 88 LLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGEECGNF 147
+LL L+ + +D + E +L S+ ++PQQ NG +CG F
Sbjct: 563 ILLQYLKQES------------IDKKRKEFDTNGWQLFSKKS---QEIPQQMNGSDCGMF 607
Query: 148 VLYFINLFVEGAPENFNLEDYPYFMEK 174
+ + + P NF + PYF ++
Sbjct: 608 ACKYADCITKDRPINFTQQHMPYFRKR 634
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 21/147 (14%)
Query: 34 KPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLIL------CNFGGSFESKTRTPCM 87
K + V W K+ +FS +LVPI HW L ++ + S C
Sbjct: 502 KTAGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFRKKNITYYDSMGGINNEACR 561
Query: 88 LLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGEECGNF 147
+LL L+ + +D + E +L S+ ++PQQ NG +CG F
Sbjct: 562 ILLQYLKQES------------IDKKRKEFDTNGWQLFSKKS---QEIPQQMNGSDCGMF 606
Query: 148 VLYFINLFVEGAPENFNLEDYPYFMEK 174
+ + + P NF + PYF ++
Sbjct: 607 ACKYADCITKDRPINFTQQHMPYFRKR 633
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 17 KKAGFTYLDSL--WFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLIL--- 71
K+ GF + + +F K + V W K+ +FS +LVPI HW L ++
Sbjct: 479 KEKGFPSVHAFNTFFFTKLKTAGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVDFR 538
Query: 72 ---CNFGGSFESKTRTPCMLLLDSL--EMSNPWRFEPDIRKFVMDIYKAEDRPETKELIS 126
+ S C +LL L E + R E D + + K+++
Sbjct: 539 RKSITYYDSMGGINNEACRILLQYLKQESVDKKRKEFDTNGWQLFSKKSQE--------- 589
Query: 127 RIPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEK 174
+PQQ NG +CG F + + + P NF + PYF ++
Sbjct: 590 --------IPQQMNGSDCGMFACKYADCITKDRPINFTQQHMPYFRKR 629
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 83 RTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGE 142
+ PC+L+LDSL+ ++ ++R+++ ++ + + + + + L PKVP+Q N
Sbjct: 918 KRPCILILDSLKAASIQNTVQNLREYLEVEWEVKRKTHREFSKTNMVDLCPKVPKQDNSS 977
Query: 143 ECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 177
+CG ++L ++ F + NF L P +EK WF
Sbjct: 978 DCGVYLLQYVESFFQDPIVNFEL---PIHLEK-WF 1008
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 40 KVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILC 72
+V TW + +IF+K Y+ VP+ HW L ++C
Sbjct: 822 RVRTWTRHINIFNKDYIFVPVNESSHWYLAVIC 854
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 49 HIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKF 108
H+ + +PI HW L ++ F+ LDS + P + R F
Sbjct: 377 HLKDCDKIFIPIHMNIHWTLAVINIKDQKFQ---------YLDSFKGREPKILDALARYF 427
Query: 109 VMDIYKAEDRPETKELISR-IPLLVPKVPQQRNGEECGNFVLYFINLFVEGAPENFNLED 167
V ++ D+ E +SR V +P QRNG +CG F++ +I+ + G F E
Sbjct: 428 VDEV---RDKSEVDLDVSRWRQEFVQDLPMQRNGFDCGMFMVKYIDFYSRGLDLCFTQEQ 484
Query: 168 YPYFMEK 174
PYF +
Sbjct: 485 MPYFRAR 491
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 83 RTPCMLLLDSLEMSNPWRFEPDIRKFVM---DIYKAEDRPETKELISRIPLLVPKVPQQR 139
+ PC+LL+DSL + +R+++ ++ K R +K+++ PKVPQQ
Sbjct: 988 KQPCILLMDSLRGPSRSNVVKILREYLEVEWEVKKGSKRSFSKDVMKGSN---PKVPQQN 1044
Query: 140 NGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 177
N +CG +VL ++ F E NF L P + NWF
Sbjct: 1045 NFSDCGVYVLQYVESFFENPVLNFEL---PMNL-MNWF 1078
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 39 AKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILC 72
+V TW + IF K ++ VP+ HW L ++C
Sbjct: 759 GRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVC 792
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 83 RTPCMLLLDSLEMSNPWRFEPDIRKFVM---DIYKAEDRPETKELISRIPLLVPKVPQQR 139
+ PC+LL+DSL + +R+++ ++ K R +K+++ PKVPQQ
Sbjct: 969 KQPCILLMDSLRGPSRSNVVKILREYLEVEWEVKKGSKRSFSKDVMKGSN---PKVPQQN 1025
Query: 140 NGEECGNFVLYFINLFVEGAPENFNLEDYPYFMEKNWF 177
N +CG +VL ++ F E +F L P + NWF
Sbjct: 1026 NFSDCGVYVLQYVESFFENPILSFEL---PMNL-ANWF 1059
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 39 AKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILC 72
+V TW + IF K ++ VP+ HW L ++C
Sbjct: 739 GRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVC 772
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 37.0 bits (84), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 23 YLDSLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKT 82
+ +S ++D R V W K IF+K+ +L+PI HW+L+ S + +
Sbjct: 424 FFNSFFYDKLRTKGYDG-VKRWTKNVDIFNKELLLIPIHLEVHWSLI-------SVDVRR 475
Query: 83 RTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGE 142
RT + DS N R I K++ +DR + + + V +Q N
Sbjct: 476 RT--ITYFDSQRTLN-RRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFKM--NVARQNNDS 530
Query: 143 ECGNFVLYFINLFVEGAPENFNLEDYP 169
+CG FVL + P +F +D P
Sbjct: 531 DCGAFVLQYCKHLALSQPFSFTQQDMP 557
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Query: 23 YLDSLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFESKT 82
+ +S ++D R V W K IF+K+ +L+PI HW+L+ S + +
Sbjct: 418 FFNSFFYDKLRTKGYDG-VKRWTKNVDIFNKELLLIPIHLEVHWSLI-------SVDVRR 469
Query: 83 RTPCMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGE 142
RT + DS N R I K++ +DR + + + V +Q N
Sbjct: 470 RT--ITYFDSQRTLN-RRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFKM--NVARQNNDS 524
Query: 143 ECGNFVLYFINLFVEGAPENFNLEDYP 169
+CG FVL + P +F +D P
Sbjct: 525 DCGAFVLQYCKHLALSQPFSFTQQDMP 551
>sp|A6H5J1|CYF_CYCTA Apocytochrome f OS=Cycas taitungensis GN=petA PE=3 SV=1
Length = 320
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 86 CMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGE 142
++L + E++ P R P+I++ + ++Y RP KE+ L++ VP Q+ E
Sbjct: 109 VLILPEGFELAPPDRISPEIKEKIGNLYFQNYRPNQKEI-----LVIGPVPGQKYSE 160
>sp|B1VKB7|CYF_CRYJA Apocytochrome f OS=Cryptomeria japonica GN=petA PE=3 SV=1
Length = 321
Score = 30.0 bits (66), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 86 CMLLLDSLEMSNPWRFEPDIRKFVMDIYKAEDRPETKELISRIPLLVPKVPQQRNGE 142
++L + E++ P R P+I++ + D+Y RP K + L++ VP Q+ E
Sbjct: 110 VLILPEGFELAPPDRIYPEIKEKIGDLYFQNYRPNQKNI-----LIIGPVPGQKYSE 161
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.463
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,120,720
Number of Sequences: 539616
Number of extensions: 3292409
Number of successful extensions: 7532
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 7472
Number of HSP's gapped (non-prelim): 41
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 58 (26.9 bits)