BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 029359
         (194 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q09676|YA03_SCHPO Uncharacterized protein C5H10.03 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPAC5H10.03 PE=4 SV=1
          Length = 219

 Score = 39.3 bits (90), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 25/136 (18%)

Query: 50  ERLGVHPCDKRRSISEYHSLFPAIDFKL----IESEDDKLWKADAREPFEEVTA-RGMEF 104
           + +G  PCD    + + + L+P  +F+     I  E   ++ +D       ++A R  E 
Sbjct: 96  QEVGHLPCDIGLELDKLNKLYPKYNFQSCQDGIYPEKRDIYASDVT-----ISAIRSKEA 150

Query: 105 MKWLWTRQEKEIAVVSHGIFLQQTLNALLN--DCQTSPNQELCPRFTNCEIRSVVIVDQS 162
           +++L    +++IAV++H  F++  L  ++   D    P Q     F NCE R   +V   
Sbjct: 151 LEYLAALPQQQIAVITHSAFIRFLLKKMVKAADIDFLPPQL---SFKNCEFRIYDLVQ-- 205

Query: 163 IRGSCYPGTISGELRL 178
                   T +GEL+L
Sbjct: 206 --------TTTGELKL 213


>sp|P36069|PMU1_YEAST Probable phosphomutase PMU1 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=PMU1 PE=1 SV=1
          Length = 295

 Score = 37.0 bits (84), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 13/101 (12%)

Query: 45  VELCRERLGVHPCDKR----RSISEYHSLFP----AIDFKLIES--EDDKLWKADAREPF 94
           +E  RE LG H CDKR     ++ EY          + ++ +    EDD+LW  D RE  
Sbjct: 165 IEGLRETLGSHTCDKRVAHSMAVDEYQDFSTESGHTVHWQYVPDYPEDDELWLPDHRETC 224

Query: 95  EEVTARGMEFMKWLWTR---QEKEIAVVSHGIFLQQTLNAL 132
            E+  R +  +  L+ +   +EK I++  H   +Q  L  L
Sbjct: 225 AEMDKRTLNGLFELFNQLSSEEKFISLTCHSGVIQSVLRNL 265


>sp|O94420|YQGD_SCHPO Probable phosphatase C1620.13 OS=Schizosaccharomyces pombe (strain
           972 / ATCC 24843) GN=SPCC1620.13 PE=3 SV=1
          Length = 282

 Score = 36.6 bits (83), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 34  TATVNCPPIIAVELCRERLGVHPCDKRRSISEYHSLFPAIDFKLIESEDDKLWKADAREP 93
           T   NCP  I+  L  + LG       R  + Y    P +    +ES D  L +A     
Sbjct: 120 TKVANCPLYISDFLMEKDLGSLEGTSFRYTANYRPREPPMKVTNLESRDSLLTRARGFTD 179

Query: 94  FEEVTARGMEFMKWLWTRQEKEIAVVSHGIFLQQTLNALLNDCQT 138
                A G E          K I VVSHGIFL   L A+L   +T
Sbjct: 180 ILFNEAIGFE------GESGKTIVVVSHGIFLPFLLRAILARART 218


>sp|Q029U7|Y1185_SOLUE UPF0502 protein Acid_1185 OS=Solibacter usitatus (strain Ellin6076)
           GN=Acid_1185 PE=3 SV=2
          Length = 206

 Score = 31.2 bits (69), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 124 FLQQTLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLPAD-- 181
           +   +LNAL+N C    N+E    F    + + +     +R       ISGE R+P    
Sbjct: 26  YYPMSLNALVNACNQKSNREPVVNFDEETVETAL---HELRAKGLSSRISGESRVPKHEQ 82

Query: 182 --VAKENIPREEVS 193
             V K N+ R E +
Sbjct: 83  RFVEKFNLGRREAA 96


>sp|P08953|TOLL_DROME Protein toll OS=Drosophila melanogaster GN=Tl PE=1 SV=1
          Length = 1097

 Score = 30.8 bits (68), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 135 DCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLP 179
           D    P +  CPR  NC +R+    D+++  +C+ G ++   RLP
Sbjct: 621 DFSDDPRERKCPRGCNCHVRT---YDKALVINCHSGNLTHVPRLP 662


>sp|P54788|ORC1_KLULA Origin recognition complex subunit 1 OS=Kluyveromyces lactis
           (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
           NRRL Y-1140 / WM37) GN=ORC1 PE=3 SV=2
          Length = 886

 Score = 30.4 bits (67), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 128 TLNALLNDCQTSPNQELCPRFTNCEIRSVVIVDQSIRGSCYPGTISGELRLPADVAKENI 187
           T+  ++ D  TS +Q+  PRF   EI  + IV  S     +   ISGE +L +  A E++
Sbjct: 480 TVREVVKDLMTSADQKELPRFQYIEINGLKIVKASDSYEVFWQKISGE-KLTSGAAMESL 538


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.135    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,865,665
Number of Sequences: 539616
Number of extensions: 2692948
Number of successful extensions: 5926
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 5923
Number of HSP's gapped (non-prelim): 9
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)