BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029361
(194 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225451561|ref|XP_002274525.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Vitis vinifera]
Length = 191
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/191 (75%), Positives = 173/191 (90%), Gaps = 1/191 (0%)
Query: 5 ISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY 64
++K+LISV++AL L+SS+ SSDVPFIVAHKKASL RLKSGAER+SVSIDI+NQG++TAY
Sbjct: 1 MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAY 60
Query: 65 DVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIP 124
DVSLTDDSW QD F+++SGN S SWERLDAGG+LSH+FEL++KV+GMF+G+PA+ITFRIP
Sbjct: 61 DVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIP 120
Query: 125 TKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSK 184
T AALQEAYSTP+LPLD+LA +P E K E AKRLLAKYGSQISVISI+ +FVYL+ SPSK
Sbjct: 121 TTAALQEAYSTPILPLDILAVRPPEKKFEWAKRLLAKYGSQISVISIVSVFVYLVASPSK 180
Query: 185 S-AAKGSKKKR 194
S A KGSKKKR
Sbjct: 181 SGAGKGSKKKR 191
>gi|255543619|ref|XP_002512872.1| translocon-associated protein, beta subunit precursor, putative
[Ricinus communis]
gi|223547883|gb|EEF49375.1| translocon-associated protein, beta subunit precursor, putative
[Ricinus communis]
Length = 208
Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/183 (80%), Positives = 166/183 (90%), Gaps = 3/183 (1%)
Query: 12 VLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD 71
+L+ALFLISS+ ASSDVPFIVAHKKA+L RLKSGAER+SVSIDI+NQG+STAYDVSL DD
Sbjct: 9 LLVALFLISSTSASSDVPFIVAHKKATLNRLKSGAERVSVSIDIYNQGSSTAYDVSLLDD 68
Query: 72 SWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQE 131
WPQD FDVISGN SQSWERLD GGILSH+FEL+ KVKG+F+GSPA++TFRIPTKAALQE
Sbjct: 69 HWPQDIFDVISGNTSQSWERLDVGGILSHTFELEGKVKGLFYGSPAVVTFRIPTKAALQE 128
Query: 132 AYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSK-SAAKGS 190
A+STP+LPLDVLAE+P E K E RLLAKYGS ISVISI+VLFVYL+ SPSK SAAKGS
Sbjct: 129 AFSTPILPLDVLAERPPEKKFEW--RLLAKYGSLISVISIVVLFVYLVASPSKSSAAKGS 186
Query: 191 KKK 193
KK+
Sbjct: 187 KKR 189
>gi|359488447|ref|XP_002274610.2| PREDICTED: translocon-associated protein subunit beta isoform 2
[Vitis vinifera]
Length = 189
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/191 (74%), Positives = 171/191 (89%), Gaps = 3/191 (1%)
Query: 5 ISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY 64
++K+LISV++AL L+SS+ SSDVPFIVAHKKASL RLKSGAER+SVSIDI+NQG++TAY
Sbjct: 1 MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAY 60
Query: 65 DVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIP 124
DVSLTDDSW QD F+++SGN S SWERLDAGG+LSH+FEL++KV+GMF+G+PA+ITFRIP
Sbjct: 61 DVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIP 120
Query: 125 TKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSK 184
T AALQEAYSTP+LPLD+LA +P E K E RLLAKYGSQISVISI+ +FVYL+ SPSK
Sbjct: 121 TTAALQEAYSTPILPLDILAVRPPEKKFEW--RLLAKYGSQISVISIVSVFVYLVASPSK 178
Query: 185 S-AAKGSKKKR 194
S A KGSKKKR
Sbjct: 179 SGAGKGSKKKR 189
>gi|118484599|gb|ABK94173.1| unknown [Populus trichocarpa]
Length = 196
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 134/169 (79%), Positives = 156/169 (92%), Gaps = 1/169 (0%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
DVPFIVAHKKA+ + LKSGAER+SVSIDI+NQG+STAYD++LTDD WP+D FDV+SGN S
Sbjct: 28 DVPFIVAHKKATPRGLKSGAERVSVSIDIYNQGSSTAYDITLTDDHWPKDIFDVVSGNTS 87
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
QSW+RLDAGG+LSH+FEL+ KVKGMFHGSPA+ITFRIPTKAALQEAYSTP+LPLDVLAEK
Sbjct: 88 QSWDRLDAGGLLSHAFELEGKVKGMFHGSPAVITFRIPTKAALQEAYSTPILPLDVLAEK 147
Query: 147 PTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS-AAKGSKKKR 194
P KLELAK+LLAKYGS ISVISI+VLF+YL+ +PSKS AAK +KK+R
Sbjct: 148 PPVQKLELAKKLLAKYGSLISVISIVVLFIYLLVTPSKSGAAKANKKRR 196
>gi|297807427|ref|XP_002871597.1| translocon-associated protein beta family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297317434|gb|EFH47856.1| translocon-associated protein beta family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 195
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 167/194 (86%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
MA +SK LIS + L+S+SFA+S+VPF+V HKKA+L RLKSGAER+SVS DI+NQG+
Sbjct: 1 MAIALSKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
STAYDV+LTD+SW + F+V++GN S+SWERLDAGGILSHSFEL+AKVKG+F+G+PA++T
Sbjct: 61 STAYDVTLTDNSWDKATFEVVNGNTSKSWERLDAGGILSHSFELEAKVKGVFYGAPAVVT 120
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLIT 180
FRIPTK ALQEAYSTP+LPLD+LA+KP L++AKRLLAKYGS +SVIS++VLF+YL+
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKILDVAKRLLAKYGSLVSVISMVVLFIYLVA 180
Query: 181 SPSKSAAKGSKKKR 194
+P + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194
>gi|351725945|ref|NP_001236342.1| uncharacterized protein LOC100500066 precursor [Glycine max]
gi|255628939|gb|ACU14814.1| unknown [Glycine max]
Length = 194
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 134/179 (74%), Positives = 156/179 (87%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
MA PI+K+LI+ + L+ S ASSDVPFIVAHKKASL RLKSGAER+SV+IDI NQGT
Sbjct: 1 MADPIAKALIAFALLTSLLLCSHASSDVPFIVAHKKASLNRLKSGAERVSVTIDIFNQGT 60
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
STAYDVSL+DDSWP D FDVISG+ S+SWERLDAGGILSH+FEL+AK KG+F G PA+I
Sbjct: 61 STAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGILSHTFELEAKSKGVFAGEPAVIK 120
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLI 179
FR+PTK+ALQEAYSTP+LPLDVL+++P E K E AKRLLAKYGS ISVISI+VLFVYL+
Sbjct: 121 FRVPTKSALQEAYSTPILPLDVLSDRPPEKKFEWAKRLLAKYGSLISVISIMVLFVYLV 179
>gi|18417271|ref|NP_568293.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|186522719|ref|NP_001119221.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|186522723|ref|NP_001119222.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|186522727|ref|NP_001119223.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|14517446|gb|AAK62613.1| AT5g14030/MUA22_2 [Arabidopsis thaliana]
gi|21553748|gb|AAM62841.1| unknown [Arabidopsis thaliana]
gi|22136544|gb|AAM91058.1| AT5g14030/MUA22_2 [Arabidopsis thaliana]
gi|332004593|gb|AED91976.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|332004594|gb|AED91977.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|332004595|gb|AED91978.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
gi|332004596|gb|AED91979.1| translocon-associated protein subunit beta [Arabidopsis thaliana]
Length = 195
Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 125/194 (64%), Positives = 165/194 (85%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
MA ++K LIS + L+S+SFA+S+VPF+V HKKA+L RLKSGAER+SVS DI+NQG+
Sbjct: 1 MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
S+AYDV+LTD+SW + F+V++GN S+SWERLDAGGILSHS EL+AKVKG+F+G+PA++T
Sbjct: 61 SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLIT 180
FRIPTK ALQEAYSTP+LPLD+LA+KP L++AKRLLAKYGS +SVIS++V F+YL+
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDVAKRLLAKYGSLVSVISMVVCFIYLVA 180
Query: 181 SPSKSAAKGSKKKR 194
+P + +K S KK+
Sbjct: 181 TPKSNVSKASSKKK 194
>gi|388500708|gb|AFK38420.1| unknown [Lotus japonicus]
Length = 198
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/184 (72%), Positives = 160/184 (86%), Gaps = 2/184 (1%)
Query: 1 MASPISKSLI--SVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQ 58
MA PISK+LI S++ +L L S + +SSDVPFIVAHKKASL RLKSGAER+SVSIDI+NQ
Sbjct: 3 MADPISKALILLSIVASLLLCSHASSSSDVPFIVAHKKASLNRLKSGAERVSVSIDIYNQ 62
Query: 59 GTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118
G+STAYD+SL DD+WP D F +ISG+ S+SWERLDAGGILSH+FEL+AK KG+F G PA+
Sbjct: 63 GSSTAYDISLADDTWPSDLFSIISGSTSKSWERLDAGGILSHTFELEAKTKGVFSGQPAV 122
Query: 119 ITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYL 178
I FRIPTK+ALQEA+STP+LPLD+LA++P E KLE AKRLLAKYGS SVISI+VLFVYL
Sbjct: 123 IKFRIPTKSALQEAFSTPILPLDILADRPPEKKLEWAKRLLAKYGSLFSVISIMVLFVYL 182
Query: 179 ITSP 182
+ +P
Sbjct: 183 VATP 186
>gi|224055805|ref|XP_002298662.1| predicted protein [Populus trichocarpa]
gi|222845920|gb|EEE83467.1| predicted protein [Populus trichocarpa]
Length = 196
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 131/168 (77%), Positives = 148/168 (88%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
DVPFIVAHKKA+L LKSGAER+SVSIDI+NQG+STAYD++L DD WPQD F+V+SGN S
Sbjct: 28 DVPFIVAHKKATLSSLKSGAERVSVSIDIYNQGSSTAYDITLVDDHWPQDMFNVVSGNTS 87
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
QSWERL AGG+LSHSFELD KVKG+F GSPA+ITFRIPTKAALQEAYSTP+LPLDVLA+K
Sbjct: 88 QSWERLHAGGLLSHSFELDGKVKGLFLGSPAVITFRIPTKAALQEAYSTPILPLDVLADK 147
Query: 147 PTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSAAKGSKKKR 194
P KLE AK+LL KYGS ISVISI+VLFVYL+ +PSKS A S KKR
Sbjct: 148 PPVQKLEWAKKLLVKYGSLISVISIVVLFVYLLVTPSKSGAAKSGKKR 195
>gi|224129228|ref|XP_002328922.1| predicted protein [Populus trichocarpa]
gi|222839352|gb|EEE77689.1| predicted protein [Populus trichocarpa]
Length = 183
Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 132/169 (78%), Positives = 154/169 (91%), Gaps = 3/169 (1%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
DVPFIVAHKKA+ + LKSGAER+SVSIDI+NQG+STAYD++LTDD WP+D FDV+SGN S
Sbjct: 17 DVPFIVAHKKATPRGLKSGAERVSVSIDIYNQGSSTAYDITLTDDHWPKDIFDVVSGNTS 76
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
QSW+RLDAGG+LSH+FEL+ KVKGMFHGSPA+ITFRIPTKAALQEAYSTP+LPLDVLAEK
Sbjct: 77 QSWDRLDAGGLLSHAFELEGKVKGMFHGSPAVITFRIPTKAALQEAYSTPILPLDVLAEK 136
Query: 147 PTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS-AAKGSKKKR 194
P KLEL +LLAKYGS ISVISI+VLF+YL+ +PSKS AAK +KK+R
Sbjct: 137 PPVQKLEL--KLLAKYGSLISVISIVVLFIYLLVTPSKSGAAKANKKRR 183
>gi|225443331|ref|XP_002263980.1| PREDICTED: uncharacterized protein LOC100244388 [Vitis vinifera]
Length = 541
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/189 (71%), Positives = 159/189 (84%), Gaps = 5/189 (2%)
Query: 6 SKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYD 65
+K+LI V++A L+SS+ SSDVPFIV HKKASL RLKSG +R+SVSIDI NQG +TAYD
Sbjct: 356 AKTLIFVVMAFILVSSTLGSSDVPFIVTHKKASLTRLKSGDKRVSVSIDICNQGPTTAYD 415
Query: 66 VSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPT 125
VSLTDDSW QD F+V+SGN S SWERLD GG+LSH+FEL++K++GMF+G+PA+ITF IPT
Sbjct: 416 VSLTDDSWSQDVFNVVSGNTSTSWERLDVGGLLSHAFELESKMEGMFYGAPAVITFHIPT 475
Query: 126 KAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS 185
AALQEAYSTP+LP D+LA +P E K E AKRLLAKYGSQISVISI VYL+ SPSKS
Sbjct: 476 TAALQEAYSTPILPSDILAVRPPEKKFEWAKRLLAKYGSQISVISI----VYLVASPSKS 531
Query: 186 -AAKGSKKK 193
A KGSKKK
Sbjct: 532 GAGKGSKKK 540
>gi|449455914|ref|XP_004145695.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Cucumis sativus]
gi|449455916|ref|XP_004145696.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Cucumis sativus]
gi|449492917|ref|XP_004159140.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Cucumis sativus]
gi|449492920|ref|XP_004159141.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Cucumis sativus]
Length = 190
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/182 (71%), Positives = 153/182 (84%), Gaps = 4/182 (2%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
MA P +I +L A +SS+ A+SDVPFIVAHKKASL RLKSGAER+SVSIDI+NQG+
Sbjct: 1 MAPP----MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGS 56
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
STAYDVSL D SWP D FD++SG S SWERLDAGG +SHSFEL+AK +GMFHGSPA+IT
Sbjct: 57 STAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVIT 116
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLIT 180
FR+PTK+ALQEA STP+LPLDVLA++P E K E KRLLAKYGS ISV+SIIVLF+YL+
Sbjct: 117 FRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVKRLLAKYGSLISVVSIIVLFIYLVA 176
Query: 181 SP 182
SP
Sbjct: 177 SP 178
>gi|147834925|emb|CAN60036.1| hypothetical protein VITISV_042671 [Vitis vinifera]
Length = 186
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/190 (71%), Positives = 160/190 (84%), Gaps = 5/190 (2%)
Query: 6 SKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYD 65
+K+LI V++ L L+SS+ SSDVPFIV HKKASL RLKSG +R+SVSIDJ NQG +TAYD
Sbjct: 1 AKTLIFVVMXLILVSSTLGSSDVPFIVTHKKASLIRLKSGDKRVSVSIDJCNQGPTTAYD 60
Query: 66 VSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPT 125
VSLTDDSW QD F+V+SGN S SWE LDAGG+LSH+FEL++K++GMF+G+PA+ITF IPT
Sbjct: 61 VSLTDDSWSQDVFNVVSGNTSTSWEXLDAGGLLSHAFELESKMEGMFYGAPAVITFHIPT 120
Query: 126 KAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS 185
AALQEAYSTP+LP D+LA +P E K E AKRLLAKYGSQISVISI VYL+ SPSKS
Sbjct: 121 TAALQEAYSTPILPSDILAVRPPEKKFEWAKRLLAKYGSQISVISI----VYLVASPSKS 176
Query: 186 -AAKGSKKKR 194
A KGSKKKR
Sbjct: 177 GAGKGSKKKR 186
>gi|357508341|ref|XP_003624459.1| Translocon-associated protein subunit beta [Medicago truncatula]
gi|355499474|gb|AES80677.1| Translocon-associated protein subunit beta [Medicago truncatula]
gi|388511679|gb|AFK43901.1| unknown [Medicago truncatula]
Length = 194
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/183 (73%), Positives = 157/183 (85%), Gaps = 2/183 (1%)
Query: 1 MASPISKSLIS-VLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQG 59
MA PISK LI+ +LIA FL+ S ASSDVPFIVAHKKASL RLK+GAER+SV+IDI+NQG
Sbjct: 1 MADPISKPLIAFLLIASFLLCSH-ASSDVPFIVAHKKASLNRLKTGAERVSVTIDIYNQG 59
Query: 60 TSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALI 119
TSTAYDVSL+DDSW D F VISG S++WE+LDAGG+LSH+FEL+AK KG+F G PA+I
Sbjct: 60 TSTAYDVSLSDDSWTSDLFSVISGTTSKTWEKLDAGGVLSHTFELEAKSKGVFAGEPAII 119
Query: 120 TFRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLI 179
FR+PT AALQEAYSTP+LPLDVLA++ E K E AKRLLAKYGS ISVISIIV+FVYL+
Sbjct: 120 KFRVPTSAALQEAYSTPILPLDVLADRAPEKKFEWAKRLLAKYGSLISVISIIVMFVYLV 179
Query: 180 TSP 182
+P
Sbjct: 180 ATP 182
>gi|9757784|dbj|BAB08282.1| unnamed protein product [Arabidopsis thaliana]
Length = 193
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 163/194 (84%), Gaps = 2/194 (1%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
MA ++K LIS + L+S+SFA+S+VPF+V HKKA+L RLKSGAER+SVS DI+NQG+
Sbjct: 1 MAVAVAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGS 60
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
S+AYDV+LTD+SW + F+V++GN S+SWERLDAGGILSHS EL+AKVKG+F+G+PA++T
Sbjct: 61 SSAYDVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVT 120
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLIT 180
FRIPTK ALQEAYSTP+LPLD+LA+KP L++ RLLAKYGS +SVIS++V F+YL+
Sbjct: 121 FRIPTKPALQEAYSTPLLPLDILADKPPTKPLDV--RLLAKYGSLVSVISMVVCFIYLVA 178
Query: 181 SPSKSAAKGSKKKR 194
+P + +K S KK+
Sbjct: 179 TPKSNVSKASSKKK 192
>gi|82623435|gb|ABB87132.1| translocon-associated protein beta family protein-like [Solanum
tuberosum]
Length = 192
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/194 (65%), Positives = 161/194 (82%), Gaps = 2/194 (1%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
MA K L++ ++AL S + A+SD PFIVAHKKA+L RLKS ERIS+SIDI+N+G+
Sbjct: 1 MADCARKFLLATVLALLCFSWTIAASDGPFIVAHKKAALTRLKSDIERISISIDIYNEGS 60
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
+TAYDVSL DD+W QD F++++GN S SWERLDAG LSHSFEL+AK K +F+G+PA+IT
Sbjct: 61 ATAYDVSLYDDNWSQDVFEIVAGNTSMSWERLDAGASLSHSFELEAKKKTVFYGAPAVIT 120
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLIT 180
FRIPTKAALQEA+STP+LPLD+LA++P E K + AK+L+AKYGS ISVISI+VLFVYL+
Sbjct: 121 FRIPTKAALQEAFSTPILPLDILADRPPEKKFDWAKKLMAKYGSLISVISIVVLFVYLLA 180
Query: 181 SPSKSAAKGSKKKR 194
SPSKS A +KKKR
Sbjct: 181 SPSKSNA--AKKKR 192
>gi|351724837|ref|NP_001238351.1| uncharacterized protein LOC100306406 precursor [Glycine max]
gi|255628433|gb|ACU14561.1| unknown [Glycine max]
Length = 194
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/179 (73%), Positives = 156/179 (87%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
MA PI+K+LI+ + L+ ASSDVPFIVAHKKASL RLKSGAER+SV+IDI+NQGT
Sbjct: 1 MADPIAKALIAFALLASLLLCLQASSDVPFIVAHKKASLNRLKSGAERVSVTIDIYNQGT 60
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
STAYDVSL+DDSWP D FDVISG+ S+SWERLDAGGI+SH+FEL+AK KG+F G PA+I
Sbjct: 61 STAYDVSLSDDSWPSDAFDVISGSTSKSWERLDAGGIISHTFELEAKSKGVFAGEPAVIK 120
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLI 179
FR+PTKAALQEAYSTP+LPLDVL+++P E K E AKRLLAKYGS ISVISI+VLF+YL+
Sbjct: 121 FRVPTKAALQEAYSTPILPLDVLSDRPPEKKFEWAKRLLAKYGSLISVISIMVLFIYLV 179
>gi|296082292|emb|CBI21297.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 245 bits (626), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/152 (73%), Positives = 137/152 (90%)
Query: 5 ISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY 64
++K+LISV++AL L+SS+ SSDVPFIVAHKKASL RLKSGAER+SVSIDI+NQG++TAY
Sbjct: 1 MAKTLISVVVALILVSSTLGSSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSTTAY 60
Query: 65 DVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIP 124
DVSLTDDSW QD F+++SGN S SWERLDAGG+LSH+FEL++KV+GMF+G+PA+ITFRIP
Sbjct: 61 DVSLTDDSWSQDVFNIVSGNTSTSWERLDAGGLLSHAFELESKVEGMFYGAPAVITFRIP 120
Query: 125 TKAALQEAYSTPMLPLDVLAEKPTENKLELAK 156
T AALQEAYSTP+LPLD+LA +P E K E K
Sbjct: 121 TTAALQEAYSTPILPLDILAVRPPEKKFEWVK 152
>gi|346466259|gb|AEO32974.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 143/169 (84%), Gaps = 1/169 (0%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
D PFIVAHKK +L RL +G ER++V+ID++N+G++TAYDVSL+DDSW + FD+ SG+ S
Sbjct: 44 DGPFIVAHKKVALSRLNTGMERVTVTIDVYNEGSATAYDVSLSDDSWAHEVFDITSGSTS 103
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
++WERLDAG +SH+F L ++VKG++H S A+I +RIPTKA+LQEA STP+ PLD+LA+K
Sbjct: 104 KTWERLDAGASVSHTFVLQSQVKGLYHSSSAVIKYRIPTKASLQEALSTPVQPLDILADK 163
Query: 147 PTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSK-SAAKGSKKKR 194
P E K E AK+LLA+YGSQ+SV+S++ LFVY++ SPSK SAAKGSKK+R
Sbjct: 164 PPEKKFEWAKKLLARYGSQVSVVSLVGLFVYVVASPSKSSAAKGSKKRR 212
>gi|357135093|ref|XP_003569146.1| PREDICTED: translocon-associated protein subunit beta-like
[Brachypodium distachyon]
Length = 194
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 20 SSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFD 79
+++ A D PF+VAHK+ +L R G ER++V++D++NQG++TAYDVSL DDSWPQ+ F+
Sbjct: 19 TAAAAEGDAPFVVAHKRVALSRPVPGVERLAVTLDLYNQGSATAYDVSLNDDSWPQEAFE 78
Query: 80 VISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLP 139
++SG+ S+ E+LD G SHSF L+ KV+G F GSPA+I +R+PTKAALQEAYSTP+LP
Sbjct: 79 LVSGSTSKIVEKLDPGSTASHSFVLETKVQGRFQGSPAVIKYRVPTKAALQEAYSTPVLP 138
Query: 140 LDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS-AAKGSKKKR 194
D+LA++P + K ELAKRL+ K+G SV+S + F+YL+ SPSKS AAKGSKK+R
Sbjct: 139 FDILADRPPQKKFELAKRLVGKFGPLASVVSFVGAFIYLVASPSKSGAAKGSKKRR 194
>gi|357134460|ref|XP_003568835.1| PREDICTED: translocon-associated protein subunit beta-like
[Brachypodium distachyon]
Length = 193
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 135/172 (78%), Gaps = 1/172 (0%)
Query: 24 ASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG 83
A+ D PFIVAHKK +L R K G ER++VS+D++NQG++TAYDV++TDDSWP++ F+++SG
Sbjct: 22 AAGDAPFIVAHKKVALSRPKPGVERLAVSLDLYNQGSATAYDVAITDDSWPKEAFELVSG 81
Query: 84 NISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVL 143
+S++ ERLD G SH F L+ K +G F GSPA+I +R+PTKA LQEA+STP+L LD+L
Sbjct: 82 EVSKTLERLDPGATASHVFVLETKAQGRFQGSPAVIKYRVPTKAVLQEAFSTPILALDIL 141
Query: 144 AEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS-AAKGSKKKR 194
AE+P K E AK+L+AKYG+ +SV+S + F+YL+ SPSKS AK KK+R
Sbjct: 142 AERPPVKKFEWAKKLVAKYGALVSVVSFVAAFIYLVASPSKSGGAKAGKKRR 193
>gi|215704479|dbj|BAG93913.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 190
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 140/169 (82%), Gaps = 1/169 (0%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
D PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DD+WP++ F+++SG +S
Sbjct: 22 DAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMS 81
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
++ ERLD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTP+L LDVLAE+
Sbjct: 82 KTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDVLAER 141
Query: 147 PTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSA-AKGSKKKR 194
P E K E AKRL+AKYGS +SV+ ++ +F+YL+ SPSKS+ AK SKK+R
Sbjct: 142 PPEKKFEWAKRLVAKYGSLVSVVGLVGVFIYLVASPSKSSGAKASKKRR 190
>gi|52076608|dbj|BAD45510.1| unknown protein [Oryza sativa Japonica Group]
Length = 190
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 103/169 (60%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
D PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DD+WP++ F+++SG +S
Sbjct: 22 DAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMS 81
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
++ ERLD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTP+L LDVLAE+
Sbjct: 82 KTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDVLAER 141
Query: 147 PTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSA-AKGSKKKR 194
P E K E KRL+AKYGS +SV+ ++ +F+YL+ SPSKS+ AK SKK+R
Sbjct: 142 PPEKKFEWVKRLVAKYGSLVSVVGLVGVFIYLVASPSKSSGAKASKKRR 190
>gi|215737084|dbj|BAG96013.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 194
Score = 212 bits (539), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
Query: 24 ASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG 83
A D PF+VA KK +L R G ER++V+++++NQG++TAYDVSL DDSWPQ+ F +ISG
Sbjct: 23 AGQDAPFVVAQKKVALSRPGPGVERLAVTLNLYNQGSATAYDVSLNDDSWPQEAFQLISG 82
Query: 84 NISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVL 143
S+ E+LD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTPM PLD+L
Sbjct: 83 TTSKIVEKLDPGATASHNFILETKVQGKFQGSPAIITYRVPTKAALQEAYSTPMFPLDIL 142
Query: 144 AEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS-AAKGSKKKR 194
AE+P + K ELAKRL+ KYGS +SV+S + +F+YL+ SPSKS AAKGSKK+R
Sbjct: 143 AERPPQQKFELAKRLVGKYGSLVSVVSFVGVFIYLVASPSKSTAAKGSKKRR 194
>gi|15128456|dbj|BAB62640.1| P0402A09.25 [Oryza sativa Japonica Group]
gi|20804445|dbj|BAB92142.1| P0455C04.19 [Oryza sativa Japonica Group]
Length = 188
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/169 (60%), Positives = 138/169 (81%), Gaps = 3/169 (1%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
D PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DD+WP++ F+++SG +S
Sbjct: 22 DAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMS 81
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
++ ERLD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTP+L LDVLAE+
Sbjct: 82 KTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDVLAER 141
Query: 147 PTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSA-AKGSKKKR 194
P E K E RL+AKYGS +SV+ ++ +F+YL+ SPSKS+ AK SKK+R
Sbjct: 142 PPEKKFEW--RLVAKYGSLVSVVGLVGVFIYLVASPSKSSGAKASKKRR 188
>gi|195609004|gb|ACG26332.1| translocon-associated protein beta containing protein [Zea mays]
Length = 191
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 121/151 (80%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DDSWP + F++++G S++
Sbjct: 26 PFVVAHKKISLSRPKPGVERVAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKT 85
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
ERLD G SH++ L+ K +G F GSPA+IT+R+PTK ALQEAYSTP+ PLD+LAE+P
Sbjct: 86 LERLDPGATASHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERPP 145
Query: 149 ENKLELAKRLLAKYGSQISVISIIVLFVYLI 179
E K E AKRL+ KYGS +SV+S + LF+YL+
Sbjct: 146 EKKFEWAKRLVMKYGSLVSVVSFVGLFIYLV 176
>gi|194702576|gb|ACF85372.1| unknown [Zea mays]
gi|194707872|gb|ACF88020.1| unknown [Zea mays]
gi|224034209|gb|ACN36180.1| unknown [Zea mays]
gi|414878071|tpg|DAA55202.1| TPA: translocon-associated protein beta containing protein [Zea
mays]
Length = 190
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 121/151 (80%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DDSWP + F++++G S++
Sbjct: 25 PFVVAHKKISLSRPKPGVERVAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
ERLD G SH++ L+ K +G F GSPA+IT+R+PTK ALQEAYSTP+ PLD+LAE+P
Sbjct: 85 LERLDPGATASHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERPP 144
Query: 149 ENKLELAKRLLAKYGSQISVISIIVLFVYLI 179
E K E AKRL+ KYGS +SV+S + LF+YL+
Sbjct: 145 EKKFEWAKRLVMKYGSLVSVVSFVGLFIYLV 175
>gi|226492777|ref|NP_001149647.1| translocon-associated protein beta containing protein precursor
[Zea mays]
gi|195628792|gb|ACG36225.1| translocon-associated protein beta containing protein [Zea mays]
gi|223974959|gb|ACN31667.1| unknown [Zea mays]
gi|414868519|tpg|DAA47076.1| TPA: Translocon-associated protein beta containing protein [Zea
mays]
Length = 190
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 89/151 (58%), Positives = 120/151 (79%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVSL DDSWP F++++G S++
Sbjct: 25 PFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
ERLD G +H++ L+ K +G F GSPA+IT+R+PTK ALQEAYSTP+ PLD+LAE+
Sbjct: 85 LERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERLP 144
Query: 149 ENKLELAKRLLAKYGSQISVISIIVLFVYLI 179
E K E AKRL+AKYGS +SV+S + LF+YL+
Sbjct: 145 EKKFEWAKRLVAKYGSLVSVVSFVGLFIYLV 175
>gi|218195918|gb|EEC78345.1| hypothetical protein OsI_18092 [Oryza sativa Indica Group]
gi|222629874|gb|EEE62006.1| hypothetical protein OsJ_16788 [Oryza sativa Japonica Group]
Length = 192
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 135/172 (78%), Gaps = 3/172 (1%)
Query: 24 ASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG 83
A D PF+VA KK +L R G ER++V+++++NQG++TAYDVSL DDSWPQ+ F +ISG
Sbjct: 23 AGQDAPFVVAQKKVALSRPGPGVERLAVTLNLYNQGSATAYDVSLNDDSWPQEAFQLISG 82
Query: 84 NISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVL 143
S+ E+LD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTPM PLD+L
Sbjct: 83 TTSKIVEKLDPGATASHNFILETKVQGKFQGSPAIITYRVPTKAALQEAYSTPMFPLDIL 142
Query: 144 AEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS-AAKGSKKKR 194
AE+P + K EL RL+ KYGS +SV+S + +F+YL+ SPSKS AAKGSKK+R
Sbjct: 143 AERPPQQKFEL--RLVGKYGSLVSVVSFVGVFIYLVASPSKSTAAKGSKKRR 192
>gi|326501412|dbj|BAK02495.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326507858|dbj|BAJ86672.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 130/164 (79%), Gaps = 1/164 (0%)
Query: 19 ISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKF 78
+S +FA+ D PF+VAHKK +L R K G ER++VS+D++NQG++TAYDV++ DDSWP++ F
Sbjct: 18 VSCAFAA-DAPFLVAHKKVALSRPKPGVERLAVSLDLYNQGSATAYDVAINDDSWPKEAF 76
Query: 79 DVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPML 138
+++SG +S++ ERL+ G SH+F L++K +G F SPA+I +R+ TKAALQEAYSTP+
Sbjct: 77 ELVSGEVSKTLERLEPGATASHAFVLESKTQGRFQASPAVIKYRVATKAALQEAYSTPIP 136
Query: 139 PLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSP 182
LD+LAE+P K E AK+L+AKYG+ +SV+S ++ F+YL+ SP
Sbjct: 137 ALDILAERPPVKKFEWAKKLVAKYGALVSVVSFVLGFIYLVASP 180
>gi|116794106|gb|ABK27008.1| unknown [Picea sitchensis]
Length = 192
Score = 195 bits (495), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 86/155 (55%), Positives = 122/155 (78%)
Query: 25 SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN 84
+++ PF+V HKK SL + KS ER++VSID++N+G++TAYDVSL DDSWP D F ++SGN
Sbjct: 22 AAETPFMVVHKKVSLNKGKSDTERVTVSIDLYNRGSTTAYDVSLIDDSWPSDTFSLVSGN 81
Query: 85 ISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLA 144
S +W++LD G +SH+F L++KVKG+F+G PA++ +R+ K+ LQEAYS+P+ PLD+LA
Sbjct: 82 TSFTWDKLDVGASVSHTFVLESKVKGLFYGRPAVVKYRVAAKSVLQEAYSSPIPPLDILA 141
Query: 145 EKPTENKLELAKRLLAKYGSQISVISIIVLFVYLI 179
E+ E K E AK+L AKYG SV+SI+ LFVYL+
Sbjct: 142 ERAPEKKYEWAKKLAAKYGPLTSVLSIVGLFVYLM 176
>gi|218187342|gb|EEC69769.1| hypothetical protein OsI_00025 [Oryza sativa Indica Group]
gi|222617568|gb|EEE53700.1| hypothetical protein OsJ_00022 [Oryza sativa Japonica Group]
Length = 1355
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 119/147 (80%), Gaps = 2/147 (1%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
D PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DD+WP++ F+++SG +S
Sbjct: 22 DAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMS 81
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
++ ERLD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTP+L LDVLAE+
Sbjct: 82 KTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDVLAER 141
Query: 147 PTENKLELAKRLLAKYGSQISVISIIV 173
P E K E RL+AKYGS +SV+ ++
Sbjct: 142 PPEKKFEW--RLVAKYGSLVSVVGLVT 166
>gi|118483806|gb|ABK93795.1| unknown [Populus trichocarpa]
Length = 119
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/117 (77%), Positives = 102/117 (87%)
Query: 78 FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPM 137
F+V+SGN SQSWERL AGG+LSHSFELD KVKG+F GSPA+ITFRIPTKAALQEAYSTP+
Sbjct: 2 FNVVSGNTSQSWERLHAGGLLSHSFELDGKVKGLFLGSPAVITFRIPTKAALQEAYSTPI 61
Query: 138 LPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSAAKGSKKKR 194
LPLDVLA+KP KLE AK+LL KYGS ISVISI+VLFVYL+ +PSKS A S KKR
Sbjct: 62 LPLDVLADKPPVQKLEWAKKLLVKYGSLISVISIVVLFVYLLVTPSKSGAAKSGKKR 118
>gi|414878070|tpg|DAA55201.1| TPA: hypothetical protein ZEAMMB73_114623 [Zea mays]
Length = 193
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 111/157 (70%), Gaps = 5/157 (3%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DDSWP + F++++G S++
Sbjct: 25 PFVVAHKKISLSRPKPGVERVAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
ERLD G SH++ L+ K +G F GSPA+IT+R+PTK ALQEAYSTP+ PLD+LAE+P
Sbjct: 85 LERLDPGATASHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERPP 144
Query: 149 ENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS 185
E K E K +I V + LF + + P +
Sbjct: 145 EKKFEWVKAC-----DEIRVTCVCCLFCWTVYLPCRE 176
>gi|115433986|ref|NP_001041751.1| Os01g0102700 [Oryza sativa Japonica Group]
gi|113531282|dbj|BAF03665.1| Os01g0102700 [Oryza sativa Japonica Group]
Length = 205
Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 80/130 (61%), Positives = 106/130 (81%)
Query: 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
D PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DD+WP++ F+++SG +S
Sbjct: 22 DAPFLVAHKKVSLSRPKPGVERLAVSLDLYNQGSATAYDVSINDDTWPKEAFELVSGEMS 81
Query: 87 QSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEK 146
++ ERLD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTP+L LDVLAE+
Sbjct: 82 KTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKAALQEAYSTPILALDVLAER 141
Query: 147 PTENKLELAK 156
P E K E K
Sbjct: 142 PPEKKFEWVK 151
>gi|115461583|ref|NP_001054391.1| Os05g0103100 [Oryza sativa Japonica Group]
gi|113577942|dbj|BAF16305.1| Os05g0103100 [Oryza sativa Japonica Group]
Length = 225
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 103/133 (77%)
Query: 24 ASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG 83
A D PF+VA KK +L R G ER++V+++++NQG++TAYDVSL DDSWPQ+ F +ISG
Sbjct: 23 AGQDAPFVVAQKKVALSRPGPGVERLAVTLNLYNQGSATAYDVSLNDDSWPQEAFQLISG 82
Query: 84 NISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVL 143
S+ E+LD G SH+F L+ KV+G F GSPA+IT+R+PTKAALQEAYSTPM PLD+L
Sbjct: 83 TTSKIVEKLDPGATASHNFILETKVQGKFQGSPAIITYRVPTKAALQEAYSTPMFPLDIL 142
Query: 144 AEKPTENKLELAK 156
AE+P + K EL K
Sbjct: 143 AERPPQQKFELVK 155
>gi|414868521|tpg|DAA47078.1| TPA: hypothetical protein ZEAMMB73_824979 [Zea mays]
Length = 193
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVSL DDSWP F++++G S++
Sbjct: 25 PFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
ERLD G +H++ L+ K +G F GSPA+IT+R+PTK ALQEAYSTP+ PLD+LAE+
Sbjct: 85 LERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERLP 144
Query: 149 ENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSAAKGSKKKR 194
E K E K +I V + L +++ P + K++
Sbjct: 145 EKKFEWVKAC-----GEIWVTCVCCLICWIVYLPRCEPVEEQLKRK 185
>gi|414868520|tpg|DAA47077.1| TPA: hypothetical protein ZEAMMB73_824979 [Zea mays]
Length = 173
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 101/131 (77%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVSL DDSWP F++++G S++
Sbjct: 25 PFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
ERLD G +H++ L+ K +G F GSPA+IT+R+PTK ALQEAYSTP+ PLD+LAE+
Sbjct: 85 LERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQEAYSTPIFPLDILAERLP 144
Query: 149 ENKLELAKRLL 159
E K E AK L
Sbjct: 145 EKKFEWAKVFL 155
>gi|302824685|ref|XP_002993983.1| hypothetical protein SELMODRAFT_138003 [Selaginella moellendorffii]
gi|300138145|gb|EFJ04923.1| hypothetical protein SELMODRAFT_138003 [Selaginella moellendorffii]
Length = 190
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 130/188 (69%), Gaps = 3/188 (1%)
Query: 8 SLISVLIALFLISSSFA-SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDV 66
+L+ +AL + A +S F++ HK+ +KRLK G+ERI+VS+ +HN G++TAYDV
Sbjct: 5 ALVFAFVALLGAVGALADASSGAFLLLHKEVQIKRLKPGSERITVSLVVHNAGSTTAYDV 64
Query: 67 SLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTK 126
SL DDSWP F+V+SG+ S +WE+L+ G L HSF L+ K KG F +PA++ +R+ K
Sbjct: 65 SLIDDSWPSSYFNVVSGDTSTAWEKLEVGKSLQHSFVLEPKTKGSFQAAPAVVKYRVAAK 124
Query: 127 AALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSA 186
+ALQEA+STP+ PLD L++KP+ K + L KYG +SV+SI+ +FVYL+ +PS S
Sbjct: 125 SALQEAWSTPLPPLDTLSDKPSGIKYDFNIAL--KYGPLVSVLSIVGIFVYLMVAPSSSK 182
Query: 187 AKGSKKKR 194
SKK+R
Sbjct: 183 KSKSKKRR 190
>gi|414868522|tpg|DAA47079.1| TPA: hypothetical protein ZEAMMB73_824979 [Zea mays]
Length = 192
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 111/166 (66%), Gaps = 6/166 (3%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVSL DDSWP F++++G S++
Sbjct: 25 PFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
ERLD G +H++ L+ K +G F GSPA+IT+R+PTK ALQ AYSTP+ PLD+LAE+
Sbjct: 85 LERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQ-AYSTPIFPLDILAERLP 143
Query: 149 ENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKSAAKGSKKKR 194
E K E K +I V + L +++ P + K++
Sbjct: 144 EKKFEWVKAC-----GEIWVTCVCCLICWIVYLPRCEPVEEQLKRK 184
>gi|302794662|ref|XP_002979095.1| hypothetical protein SELMODRAFT_109700 [Selaginella moellendorffii]
gi|300153413|gb|EFJ20052.1| hypothetical protein SELMODRAFT_109700 [Selaginella moellendorffii]
Length = 190
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 112/152 (73%), Gaps = 2/152 (1%)
Query: 30 FIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW 89
F++ HK+ +KRLK G+ERI+VS+ +HN G++TAYDVSL DDSWP F+V+SG+ S +W
Sbjct: 28 FLLLHKEVQIKRLKPGSERITVSLVVHNAGSTTAYDVSLIDDSWPSSYFNVVSGDTSTAW 87
Query: 90 ERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTE 149
E+L+ G L HSF L+ K KG F +PA++ +R+ K+ALQEA+STP+ PLD L++KP+
Sbjct: 88 EKLEVGKSLQHSFVLEPKTKGSFQAAPAVVKYRVAAKSALQEAWSTPLPPLDTLSDKPSG 147
Query: 150 NKLELAKRLLAKYGSQISVISIIVLFVYLITS 181
K + L KYG +SV+SI+ +FVYL+ +
Sbjct: 148 IKYDFNIAL--KYGPLVSVLSIVGIFVYLMVA 177
>gi|226495983|ref|NP_001140613.1| hypothetical protein precursor [Zea mays]
gi|194700186|gb|ACF84177.1| unknown [Zea mays]
gi|414878069|tpg|DAA55200.1| TPA: hypothetical protein ZEAMMB73_114623 [Zea mays]
Length = 136
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 81/102 (79%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVS+ DDSWP + F++++G S++
Sbjct: 25 PFVVAHKKISLSRPKPGVERVAVSLDLYNQGSATAYDVSINDDSWPTEVFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQ 130
ERLD G SH++ L+ K +G F GSPA+IT+R+PTK ALQ
Sbjct: 85 LERLDPGATASHTYVLETKTQGRFQGSPAIITYRVPTKTALQ 126
>gi|414868523|tpg|DAA47080.1| TPA: hypothetical protein ZEAMMB73_824979, partial [Zea mays]
Length = 157
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 80/102 (78%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVSL DDSWP F++++G S++
Sbjct: 25 PFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQ 130
ERLD G +H++ L+ K +G F GSPA+IT+R+PTK ALQ
Sbjct: 85 LERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQ 126
>gi|308081744|ref|NP_001183839.1| uncharacterized protein LOC100502432 precursor [Zea mays]
gi|238014920|gb|ACR38495.1| unknown [Zea mays]
Length = 165
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 80/102 (78%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PF+VAHKK SL R K G ER++VS+D++NQG++TAYDVSL DDSWP F++++G S++
Sbjct: 25 PFVVAHKKVSLSRPKPGVERVAVSLDLYNQGSATAYDVSLNDDSWPTQAFELVTGEKSKT 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQ 130
ERLD G +H++ L+ K +G F GSPA+IT+R+PTK ALQ
Sbjct: 85 LERLDPGATATHTYVLETKTQGRFQGSPAIITYRVPTKTALQ 126
>gi|297735782|emb|CBI18469.3| unnamed protein product [Vitis vinifera]
Length = 82
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 51/64 (79%), Gaps = 5/64 (7%)
Query: 131 EAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISVISIIVLFVYLITSPSKS-AAKG 189
EAYSTP+LP D+LA +P E K E AKRLLAKYGSQISVISI VYL+ SPSKS A KG
Sbjct: 22 EAYSTPILPSDILAVRPPEKKFEWAKRLLAKYGSQISVISI----VYLVASPSKSGAGKG 77
Query: 190 SKKK 193
SKKK
Sbjct: 78 SKKK 81
>gi|428178925|gb|EKX47798.1| hypothetical protein GUITHDRAFT_137181 [Guillardia theta CCMP2712]
Length = 190
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 87/181 (48%), Gaps = 32/181 (17%)
Query: 18 LISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDK 77
L+S FA D+PF + N G+ AYDV+L DD W ++
Sbjct: 36 LVSRPFAGKDIPF---------------------QYRLFNIGSGPAYDVTLEDD-WSAEE 73
Query: 78 FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAA-LQEAYSTP 136
+ V+SG +S SW ++ AGG ++H L A G +PA +T++ AA +Q YS
Sbjct: 74 YSVVSGMVSGSWPQIPAGGNVTHIVVLKAHSFGYKSSTPAKVTYKATQDAADVQVGYSND 133
Query: 137 MLPLDVLAEKPTENKL---ELAKRLLAKYGSQISVISIIVLFVYLITSPSKSAAKGSKKK 193
+ + VL+ K +NKL + + LL + + + + + LF++ P SA G KK
Sbjct: 134 LGLIPVLSHK-EDNKLSAPHITEWLL--FIAMAAGLGFLPLFLF---RPQVSADAGKKKV 187
Query: 194 R 194
+
Sbjct: 188 K 188
>gi|50979074|ref|NP_001003269.1| translocon-associated protein subunit beta precursor [Canis lupus
familiaris]
gi|134931|sp|P23438.1|SSRB_CANFA RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Glycoprotein 25H;
Short=gp25H; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|846|emb|CAA37661.1| glycoprotein 25H [Canis lupus familiaris]
gi|937|emb|CAA37609.1| signal sequence receptor beta subunit [Canis lupus familiaris]
gi|227468|prf||1704250A signal sequence receptor beta
Length = 183
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
L SVL+ALF +S + + + K+ L R +++ +I+N G+S A DV L
Sbjct: 4 LASVLLALFAVSHAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A +T+
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTY 112
>gi|281342888|gb|EFB18472.1| hypothetical protein PANDA_016681 [Ailuropoda melanoleuca]
Length = 185
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 4/118 (3%)
Query: 4 PISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTA 63
P + L SV++ALF +S + + + K+ L R +++ +I+N G+S A
Sbjct: 1 PKMRLLASVVLALFAVSHAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAA 56
Query: 64 YDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
DV L+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A +T+
Sbjct: 57 LDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTY 114
>gi|197127486|gb|ACH43984.1| putative signal sequence receptor beta variant 1 [Taeniopygia
guttata]
Length = 183
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 13 LIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDS 72
L+A+F + S D ++A K+ L R + +++ +I+N G+S A DV L+DDS
Sbjct: 5 LLAVFALVSVARCEDGARLLA-SKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDS 63
Query: 73 WPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEA 132
+P + F ++SG +S W+R+ +SH+ L G F+ + A IT+ A +
Sbjct: 64 FPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAQVVAG 123
Query: 133 YSTPMLPLDVLAEKPTENKL 152
+++ +LA++ + +
Sbjct: 124 FTSAPGQGGILAQRDFDRRF 143
>gi|426332015|ref|XP_004026988.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Gorilla gorilla gorilla]
gi|426332017|ref|XP_004026989.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Gorilla gorilla gorilla]
Length = 202
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 1 MASPISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGT 60
+ P+ + L V++ALF ++ + + + K+ L R +++ +I+N G+
Sbjct: 15 LGMPMMRLLSFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGS 70
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
S A DV L+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT
Sbjct: 71 SAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATIT 130
Query: 121 F 121
+
Sbjct: 131 Y 131
>gi|349802965|gb|AEQ16955.1| putative translocon-associated protein subunit beta [Pipa
carvalhoi]
Length = 167
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
KA L R + +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 12 KALLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 71
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A IT+ A + Y++ +LA++ + +
Sbjct: 72 SNVSHTVVLRPLKAGYFNFTSATITYVAQEGAQVVVGYTSAPGQGGILAQREFDRRF 128
>gi|301783127|ref|XP_002926979.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Ailuropoda melanoleuca]
gi|301783129|ref|XP_002926980.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Ailuropoda melanoleuca]
Length = 183
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
L SV++ALF +S + + + K+ L R +++ +I+N G+S A DV L
Sbjct: 4 LASVVLALFAVSHAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A +T+
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTY 112
>gi|350537061|ref|NP_001232510.1| putative signal sequence receptor beta variant 2 precursor
[Taeniopygia guttata]
gi|197127487|gb|ACH43985.1| putative signal sequence receptor beta variant 2 [Taeniopygia
guttata]
Length = 183
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 13 LIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDS 72
L+A+F + S D ++A K+ L R + +++ +I+N G+S A DV L+DDS
Sbjct: 5 LLAVFALVSVARCEDGARLLA-SKSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDS 63
Query: 73 WPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEA 132
+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+ A +
Sbjct: 64 FPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEGAPVVAG 123
Query: 133 YSTPMLPLDVLAEKPTENKL 152
+++ +LA++ + +
Sbjct: 124 FTSAPGQGGILAQRDFDRRF 143
>gi|403293743|ref|XP_003937871.1| PREDICTED: translocon-associated protein subunit beta [Saimiri
boliviensis boliviensis]
Length = 183
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
L+ V++ALF ++ + + + K+ L R +++ +I+N G+S A DV L
Sbjct: 4 LVFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|34366445|emb|CAE46211.1| hypothetical protein [Homo sapiens]
Length = 143
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 4 PISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTA 63
P + L V++ALF ++ + + + K+ L R +++ +I+N G+S A
Sbjct: 20 PTMRLLSFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAA 75
Query: 64 YDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
DV L+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 76 LDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 133
>gi|114560188|ref|XP_001162990.1| PREDICTED: uncharacterized protein LOC457379 isoform 2 [Pan
troglodytes]
gi|397500875|ref|XP_003821130.1| PREDICTED: translocon-associated protein subunit beta [Pan
paniscus]
gi|194374097|dbj|BAG62361.1| unnamed protein product [Homo sapiens]
gi|410301502|gb|JAA29351.1| signal sequence receptor, beta (translocon-associated protein beta)
[Pan troglodytes]
Length = 202
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 4 PISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTA 63
P + L V++ALF ++ + + + K+ L R +++ +I+N G+S A
Sbjct: 18 PTMRLLSFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAA 73
Query: 64 YDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
DV L+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 74 LDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 131
>gi|410262768|gb|JAA19350.1| signal sequence receptor, beta (translocon-associated protein beta)
[Pan troglodytes]
Length = 239
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 4 PISKSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTA 63
P + L V++ALF ++ + + + K+ L R +++ +I+N G+S A
Sbjct: 18 PTMRLLSFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAA 73
Query: 64 YDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
DV L+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 74 LDVELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 131
>gi|296229140|ref|XP_002760044.1| PREDICTED: translocon-associated protein subunit beta [Callithrix
jacchus]
Length = 183
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
L V++ALF ++ + + + K+ L R +++ +I+N G+S A DV L
Sbjct: 4 LAFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
+DDS+P + F ++SG +S W+R+ +SH+ L G F+ + A IT+
Sbjct: 60 SDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|431892319|gb|ELK02759.1| Translocon-associated protein subunit beta [Pteropus alecto]
Length = 183
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
G +SH+ L G F+ + A +T+
Sbjct: 87 GNVSHTVVLRPLKAGHFNFTSAAVTY 112
>gi|326933506|ref|XP_003212844.1| PREDICTED: translocon-associated protein subunit beta-like
[Meleagris gallopavo]
Length = 183
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 7 KSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDV 66
K LI + ALF ++ + + K+ L R + +++ +I+N G+S A DV
Sbjct: 2 KLLILAVFALFYVARCEEGARL----LASKSLLNRYAVEGKDLTLQYNIYNVGSSAALDV 57
Query: 67 SLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
L+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 58 ELSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|344286884|ref|XP_003415186.1| PREDICTED: translocon-associated protein subunit beta-like
[Loxodonta africana]
Length = 186
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 12 VLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD 71
V++ALF ++ + + + K+ L R +++ +I+N G+S A DV L+DD
Sbjct: 10 VVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDD 65
Query: 72 SWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
S+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 66 SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 115
>gi|395532146|ref|XP_003768132.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Sarcophilus harrisii]
gi|395532148|ref|XP_003768133.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Sarcophilus harrisii]
gi|395532150|ref|XP_003768134.1| PREDICTED: translocon-associated protein subunit beta isoform 3
[Sarcophilus harrisii]
gi|395532152|ref|XP_003768135.1| PREDICTED: translocon-associated protein subunit beta isoform 4
[Sarcophilus harrisii]
Length = 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|126307640|ref|XP_001367144.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Monodelphis domestica]
gi|334322542|ref|XP_003340267.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Monodelphis domestica]
gi|334322544|ref|XP_003340268.1| PREDICTED: translocon-associated protein subunit beta-like isoform
3 [Monodelphis domestica]
Length = 183
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|351696648|gb|EHA99566.1| Translocon-associated protein subunit beta [Heterocephalus glaber]
Length = 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 30 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 89
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 90 SNVSHTVVLRPLKAGYFNFTSATITY 115
>gi|383872430|ref|NP_001244550.1| translocon-associated protein subunit beta precursor [Macaca
mulatta]
gi|355558550|gb|EHH15330.1| hypothetical protein EGK_01404 [Macaca mulatta]
gi|355745729|gb|EHH50354.1| hypothetical protein EGM_01170 [Macaca fascicularis]
gi|380815908|gb|AFE79828.1| translocon-associated protein subunit beta precursor [Macaca
mulatta]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
L V++ALF ++ + + + K+ L R +++ +I+N G+S A DV L
Sbjct: 4 LAFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
+DDS+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|4507239|ref|NP_003136.1| translocon-associated protein subunit beta precursor [Homo sapiens]
gi|332220694|ref|XP_003259489.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Nomascus leucogenys]
gi|410033890|ref|XP_003949648.1| PREDICTED: uncharacterized protein LOC457379 [Pan troglodytes]
gi|410033892|ref|XP_003949649.1| PREDICTED: uncharacterized protein LOC457379 [Pan troglodytes]
gi|441635361|ref|XP_004089904.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Nomascus leucogenys]
gi|441635364|ref|XP_004089905.1| PREDICTED: translocon-associated protein subunit beta isoform 3
[Nomascus leucogenys]
gi|1174451|sp|P43308.1|SSRB_HUMAN RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|452757|emb|CAA52207.1| translocon-associated protein [Homo sapiens]
gi|1736880|dbj|BAA07206.1| beta-signal sequence receptor [Homo sapiens]
gi|37955221|gb|AAP20059.1| HSD25 [Homo sapiens]
gi|48146063|emb|CAG33254.1| SSR2 [Homo sapiens]
gi|119573395|gb|EAW53010.1| signal sequence receptor, beta (translocon-associated protein
beta), isoform CRA_a [Homo sapiens]
gi|119573396|gb|EAW53011.1| signal sequence receptor, beta (translocon-associated protein
beta), isoform CRA_a [Homo sapiens]
gi|127796214|gb|AAH00341.2| Signal sequence receptor, beta (translocon-associated protein beta)
[Homo sapiens]
gi|189054049|dbj|BAG36556.1| unnamed protein product [Homo sapiens]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 12 VLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD 71
V++ALF ++ + + + K+ L R +++ +I+N G+S A DV L+DD
Sbjct: 7 VVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDD 62
Query: 72 SWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
S+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 63 SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|391328770|ref|XP_003738857.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Metaseiulus occidentalis]
gi|391328772|ref|XP_003738858.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Metaseiulus occidentalis]
Length = 187
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K L R +SV ++ N G + A +V LTD ++P FDV+SG++ +E++ G
Sbjct: 29 KKVLNRYLVENRDVSVDYELFNVGDAPALNVKLTDRTFPPSDFDVVSGSLDAKFEKILPG 88
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRI 123
+SHS + G+F+ + A +T+RI
Sbjct: 89 ANVSHSLVVRPNKYGLFNFTSAEVTYRI 116
>gi|354481564|ref|XP_003502971.1| PREDICTED: translocon-associated protein subunit beta-like
[Cricetulus griseus]
gi|344250969|gb|EGW07073.1| Translocon-associated protein subunit beta [Cricetulus griseus]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|348579807|ref|XP_003475670.1| PREDICTED: translocon-associated protein subunit beta-like [Cavia
porcellus]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|57529546|ref|NP_001006561.1| translocon-associated protein subunit beta precursor [Gallus
gallus]
gi|53128131|emb|CAG31274.1| hypothetical protein RCJMB04_4j5 [Gallus gallus]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|194036033|ref|XP_001928505.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Sus scrofa]
gi|194036035|ref|XP_001928508.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Sus scrofa]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|335772970|gb|AEH58235.1| translocon-associated protein subunit bet-like protein [Equus
caballus]
Length = 183
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|149751577|ref|XP_001499646.1| PREDICTED: translocon-associated protein subunit beta-like [Equus
caballus]
Length = 184
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 28 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSATITY 113
>gi|426216808|ref|XP_004002649.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Ovis aries]
Length = 186
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 30 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 89
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A +T+
Sbjct: 90 SNVSHTVVLRPLKAGYFNFTSATVTY 115
>gi|296489663|tpg|DAA31776.1| TPA: translocon-associated protein subunit beta precursor [Bos
taurus]
Length = 183
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A +T+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATVTY 112
>gi|226371906|gb|ACO51578.1| Translocon-associated protein subunit beta precursor [Rana
catesbeiana]
Length = 183
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 62/117 (52%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + +++ +I+N G+S A DV L+DDS+P + F +++G ++ W+R+
Sbjct: 27 KSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVAGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +T+ A + Y++ +LA++ + +
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATMTYLAQEGAQVVVGYTSAPGQGGILAQREFDRRF 143
>gi|62751819|ref|NP_001015533.1| translocon-associated protein subunit beta precursor [Bos taurus]
gi|426216810|ref|XP_004002650.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Ovis aries]
gi|83308967|sp|Q5E9E4.1|SSRB_BOVIN RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|59858317|gb|AAX08993.1| signal sequence receptor, beta precursor [Bos taurus]
gi|74267987|gb|AAI02098.1| SSR2 protein [Bos taurus]
Length = 183
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A +T+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATVTY 112
>gi|12860639|dbj|BAB32009.1| unnamed protein product [Mus musculus]
Length = 183
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|417408486|gb|JAA50793.1| Putative translocon-associated protein subunit beta isoform 2,
partial [Desmodus rotundus]
Length = 189
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 33 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 92
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A +T+
Sbjct: 93 SNVSHTVVLRPLKAGYFNFTSATVTY 118
>gi|154425931|gb|AAI51424.1| SSR2 protein [Bos taurus]
Length = 183
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A +T+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATVTY 112
>gi|157823735|ref|NP_001099912.1| translocon-associated protein subunit beta precursor [Rattus
norvegicus]
gi|149048121|gb|EDM00697.1| signal sequence receptor, beta (predicted), isoform CRA_b [Rattus
norvegicus]
gi|197245931|gb|AAI68754.1| Signal sequence receptor, beta [Rattus norvegicus]
Length = 183
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|13384850|ref|NP_079724.1| translocon-associated protein subunit beta precursor [Mus musculus]
gi|71162391|sp|Q9CPW5.1|SSRB_MOUSE RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|12837820|dbj|BAB23962.1| unnamed protein product [Mus musculus]
gi|12846101|dbj|BAB27030.1| unnamed protein product [Mus musculus]
gi|26341266|dbj|BAC34295.1| unnamed protein product [Mus musculus]
gi|26351151|dbj|BAC39212.1| unnamed protein product [Mus musculus]
gi|148683322|gb|EDL15269.1| signal sequence receptor, beta, isoform CRA_d [Mus musculus]
Length = 183
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|16307352|gb|AAH10214.1| Signal sequence receptor, beta [Mus musculus]
Length = 183
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|148683321|gb|EDL15268.1| signal sequence receptor, beta, isoform CRA_c [Mus musculus]
Length = 234
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 78 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 137
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A IT+
Sbjct: 138 SNVSHTVVLRPLKAGYFNFTSATITY 163
>gi|126697398|gb|ABO26656.1| signal sequence receptor beta-like protein [Haliotis discus discus]
Length = 189
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
++V I N G S A V L DDS+P+ F+V++GN+ WER+ ++H+ L
Sbjct: 45 LTVEYRIFNVGGSAALGVQLKDDSFPEADFEVVNGNLQVQWERIAPNSNVTHAVILRPTK 104
Query: 109 KGMFHGSPALITFRIPTKAA 128
G F+ + A +++++ +AA
Sbjct: 105 SGYFNFTSAEVSYKVSEEAA 124
>gi|410986764|ref|XP_003999679.1| PREDICTED: translocon-associated protein subunit beta [Felis catus]
Length = 183
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A +T+
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATVTY 112
>gi|443706692|gb|ELU02607.1| hypothetical protein CAPTEDRAFT_184319 [Capitella teleta]
Length = 185
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 7 KSLISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDV 66
K L++VL+ F+ A +D ++A K + L G + ++V +I N G S A +V
Sbjct: 2 KFLLTVLLFAFVS----ADADNARLLAAKNILNEILVEGRD-LTVQYNIFNVGGSAAREV 56
Query: 67 SLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTK 126
SLTD S+P+ F+VI G++ +W RL G +SH+ L G F+ + A I++ +
Sbjct: 57 SLTDASFPESDFEVIQGSLEVNWNRLAPGSNVSHAVILRPTKSGYFNFTSAEISYLASEE 116
Query: 127 AALQE 131
A+ ++
Sbjct: 117 ASERQ 121
>gi|40643038|emb|CAD91446.1| signal sequence receptor beta-like protein [Crassostrea gigas]
Length = 188
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
+++VLI+ S S +V ++A K + L G + ++V I N G S A DV+L
Sbjct: 6 VLAVLISFAGYSLS-EEENVARLLASKNVLNQYLVEGRD-LTVQYTIFNIGGSAALDVNL 63
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAA 128
++S+P+ F+V+ GN++ WER+ G +SH L G F+ + A ++++ AA
Sbjct: 64 KEESFPEQDFEVVKGNLNVKWERIAPGTNVSHVVVLRPLQFGYFNFTAAEVSYKPSENAA 123
>gi|62896759|dbj|BAD96320.1| signal sequence receptor, beta precursor variant [Homo sapiens]
Length = 183
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 12 VLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD 71
V++ALF ++ + + + K+ L R +++ + +N G+S A DV L+DD
Sbjct: 7 VVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNTYNVGSSAALDVELSDD 62
Query: 72 SWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
S+P + F ++SG ++ W+R+ +SH+ L G F+ + A IT+
Sbjct: 63 SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITY 112
>gi|410911542|ref|XP_003969249.1| PREDICTED: translocon-associated protein subunit beta-like
[Takifugu rubripes]
Length = 185
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 10 ISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLT 69
+ V + L L+ S A + + K+ L R +++ +I+N G+S A +V L+
Sbjct: 5 VHVFVLLALLGLSVAEEGARLLAS--KSLLNRYAVEGRDLTLQYNIYNVGSSAALEVELS 62
Query: 70 DDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
DDS+P + F ++SG ++ WER+ +SH+ L G F+ + A +++
Sbjct: 63 DDSFPPEDFGIVSGMLNVKWERIAPASNVSHTVVLRPLKAGYFNFTSASVSY 114
>gi|52345504|ref|NP_001004800.1| signal sequence receptor, beta precursor [Xenopus (Silurana)
tropicalis]
gi|49522034|gb|AAH74550.1| MGC69435 protein [Xenopus (Silurana) tropicalis]
gi|89272796|emb|CAJ82325.1| signal sequence receptor, beta (translocon-associated protein beta)
[Xenopus (Silurana) tropicalis]
Length = 183
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + +++ +I+N G+S A +V L+DDS+P + F ++SG +S W+R+
Sbjct: 27 KSLLNRYAVEGKDLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLSVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A I++ + Y++ +LA++ + +
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATISYLAQEGGQVVVGYTSAPGQGGILAQREFDRRF 143
>gi|55724916|emb|CAH89317.1| TRAP beta protein [Gallus gallus]
Length = 183
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGKDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L F+ + A IT+
Sbjct: 87 SNVSHTVVLRPLKAAYFNFTSATITY 112
>gi|148233495|ref|NP_001079681.1| signal sequence receptor, beta precursor [Xenopus laevis]
gi|13194764|gb|AAK15544.1| signal sequence receptor beta subunit [Xenopus laevis]
gi|28422221|gb|AAH46938.1| MGC53499 protein [Xenopus laevis]
Length = 183
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + +++ +I+N G+S A +V L+DDS+P + F ++SG +S W+R+
Sbjct: 27 KSLLNRFAVEGKDLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLSVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A + + + Y++ +LA++ + +
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSATVAYLAQEGGEVVVGYTSAPGQGGILAQREFDRRF 143
>gi|348544771|ref|XP_003459854.1| PREDICTED: translocon-associated protein subunit beta-like
[Oreochromis niloticus]
Length = 185
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ I+N G+S A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 29 KSLLNRYAVEGRDLTLQYSIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 88
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + + Y++ +LA++ + +
Sbjct: 89 SNVSHTVVLRPLKAGYFNFTSATVSYLVQEGGQVVVGYTSAPGQGGILAQREFDRRF 145
>gi|405974297|gb|EKC38953.1| Translocon-associated protein subunit beta [Crassostrea gigas]
Length = 1284
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 2/120 (1%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
+++VLI+ S S +V ++A K + L G + ++V I N G S A DV+L
Sbjct: 1102 VLAVLISFAGYSLS-EEENVARLLASKNVLNQYLVEGRD-LTVQYTIFNIGGSAALDVNL 1159
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAA 128
++S+P+ F+V+ GN++ WER+ G +SH L G F+ + A ++++ AA
Sbjct: 1160 KEESFPEQDFEVVKGNLNVKWERIAPGTNVSHVVVLRPLQFGYFNFTAAEVSYKPSENAA 1219
>gi|239937486|ref|NP_001154128.1| Translocon-associated protein subunit beta precursor [Oncorhynchus
mykiss]
gi|225704242|gb|ACO07967.1| Translocon-associated protein subunit beta precursor [Oncorhynchus
mykiss]
Length = 184
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N GTS A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 28 KSLLNRYAVEGRDLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGQVVVGYTSTPGQGGILAQREFDRRF 144
>gi|197632203|gb|ACH70825.1| signal sequence receptor beta [Salmo salar]
gi|221219480|gb|ACM08401.1| Translocon-associated protein subunit beta precursor [Salmo salar]
gi|221220758|gb|ACM09040.1| Translocon-associated protein subunit beta precursor [Salmo salar]
gi|221220834|gb|ACM09078.1| Translocon-associated protein subunit beta precursor [Salmo salar]
Length = 184
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N GTS A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 28 KSLLNRYAVEGRDLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRF 144
>gi|387018814|gb|AFJ51525.1| Signal sequence receptor, beta (SSR2) [Crotalus adamanteus]
gi|387019411|gb|AFJ51823.1| Translocon-associated protein subunit beta-like [Crotalus
adamanteus]
Length = 184
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K L R +++ +I+N G+S A +V L+DDS+P F ++SG ++ W+R+
Sbjct: 28 KTLLNRYAVEGRDLTLQYNIYNVGSSAALEVELSDDSFPPADFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A IT+ + + +++ +LA++ + +
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSATITYLVQEGGQVVVGFTSAPGQGGILAQREFDRRF 144
>gi|221221416|gb|ACM09369.1| Translocon-associated protein subunit beta precursor [Salmo salar]
Length = 184
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N GTS A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 28 KSLLNRYAVEGRDLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGHVVVGYTSAPGQGGILAQREFDRRF 144
>gi|58801260|ref|NP_001001399.1| translocon-associated protein subunit beta precursor [Danio rerio]
gi|50370027|gb|AAH75915.1| Signal sequence receptor, beta [Danio rerio]
Length = 184
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ I+N GTS A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 28 KSLLNRYAVEGRDLTLQYSIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRF 144
>gi|221219122|gb|ACM08222.1| Translocon-associated protein subunit beta precursor [Salmo salar]
Length = 184
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N GTS A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 28 KSLLNRYAVEGRDLTLQYNIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGHVVVGYTSAPGQGGILAQRGFDRRF 144
>gi|14348866|gb|AAK61351.1| translocon-associated protein beta [Danio rerio]
Length = 183
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ I+N GTS A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 27 KSLLNRYAVEGRDLTLQYSIYNVGTSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 87 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRF 143
>gi|47206673|emb|CAF90806.1| unnamed protein product [Tetraodon nigroviridis]
Length = 149
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 49/86 (56%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A +V L+DDS+P + F ++SG ++ WER+
Sbjct: 29 KSLLNRYAVEGRDLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWERIAPA 88
Query: 96 GILSHSFELDAKVKGMFHGSPALITF 121
+SH+ L G F+ + A +++
Sbjct: 89 SNVSHTVVLRPLKAGYFNFTSASVSY 114
>gi|330831757|ref|XP_003291923.1| hypothetical protein DICPUDRAFT_82569 [Dictyostelium purpureum]
gi|325077867|gb|EGC31552.1| hypothetical protein DICPUDRAFT_82569 [Dictyostelium purpureum]
Length = 184
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 6 SKSLISVLIALFLISSSFASSDVPFIVAHKKASL--KRLKSG---AERISVSIDIHNQGT 60
+K+L+SV + LF V F+ + K L K++ G + + + I+N G+
Sbjct: 3 TKTLVSVFLILF----------VSFVYSQKAELLFQKKIVEGPVVGKHLPIQFIIYNVGS 52
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
AYDVS D+ + FD+ISG WE L G + + ++ K G++ + ++
Sbjct: 53 DPAYDVSFIDNDFISADFDIISGQTEGKWETLAPGSQVQTNLTVEPKKSGIYSLTSTVLN 112
Query: 121 FR 122
+R
Sbjct: 113 YR 114
>gi|335955210|gb|AEH76611.1| signal sequence receptor beta [Epinephelus bruneus]
Length = 185
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 29 KSLLNRYAVEGRDLTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 88
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 89 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRF 145
>gi|291397796|ref|XP_002715370.1| PREDICTED: signal sequence receptor, beta-like [Oryctolagus
cuniculus]
Length = 148
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
+++ +I+N G+S A +V L+DDS+P + F ++SG +S W+R+ +SH+ L
Sbjct: 5 LTLQYNIYNVGSSAALEVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPLK 64
Query: 109 KGMFHGSPALITF 121
G F+ + A IT+
Sbjct: 65 AGYFNFTSATITY 77
>gi|432883712|ref|XP_004074342.1| PREDICTED: translocon-associated protein subunit beta-like [Oryzias
latipes]
Length = 189
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 60/117 (51%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +++N G+S A +V L+DDS+P + F ++SG ++ W+R+
Sbjct: 33 KSLLNRYAVEGRDLTLQYNLYNVGSSAALEVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 92
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 93 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRF 149
>gi|260788988|ref|XP_002589530.1| hypothetical protein BRAFLDRAFT_128185 [Branchiostoma floridae]
gi|229274709|gb|EEN45541.1| hypothetical protein BRAFLDRAFT_128185 [Branchiostoma floridae]
Length = 409
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
L +V I + + A +V ++A K + L G + ++V+ I+N GTS A V L
Sbjct: 226 LTAVAILGLVCLAGSADDNVARLLAAKHVQNQYLVEGRD-LTVTYSIYNVGTSAALSVQL 284
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAA 128
TD+ +P+ F V G S +W R+ G ++HS L G F+ + A +++ +P + A
Sbjct: 285 TDEGFPESDFKVKHGMPSVNWARIAPGTNVTHSIVLTPLKSGKFNFTAAELSY-VPAEGA 343
>gi|156361844|ref|XP_001625494.1| predicted protein [Nematostella vectensis]
gi|156212330|gb|EDO33394.1| predicted protein [Nematostella vectensis]
Length = 187
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 7/171 (4%)
Query: 25 SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN 84
SS IVA K L + + ++V I+N G+S A+ V+LT+ ++ ++ F V G
Sbjct: 22 SSSARLIVA--KNILNQFAVEGKDLTVHYTIYNVGSSPAFAVTLTETAFDENSFKVKHGL 79
Query: 85 ISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLA 144
S W+ + G +SH+ L+ G+F+ + A++T++ A Q A+ST V++
Sbjct: 80 TSIKWKSIVPGTNVSHTLILEPLKSGVFNFTSAMVTYKPSEDAPEQVAFSTAPGEGGVMS 139
Query: 145 EKPTENKLELAKRLLAKYG--SQISVISIIVLFVYLITSPSKSAAKGSKKK 193
K + K L +G S +S+ ++++ F+ S SK +KK
Sbjct: 140 NKDYQRK---HSPHLVDWGLFSLMSIPTMLIPFMVWYRSHSKYENIKAKKN 187
>gi|440795454|gb|ELR16574.1| transloconassociated protein subunit beta, putative [Acanthamoeba
castellanii str. Neff]
Length = 191
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 9/134 (6%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK- 107
+ V I+I N G ++AYDV L D W ++ FDV G + +W+++ G +SH F + K
Sbjct: 40 VVVKINIFNTGKTSAYDVELFDQDWLKN-FDVKVGIPTATWDKIAPGQNVSHYFVVQPKA 98
Query: 108 --VKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYG-- 163
+ P + +R K LQ S P P + + E ++ LA +G
Sbjct: 99 GVANTVVRALPGYVQYRETAKGPLQARLSIP--PSRIQFREALEGEVRSGSH-LAHWGIF 155
Query: 164 SQISVISIIVLFVY 177
S +SV S++V F +
Sbjct: 156 SFLSVASLLVPFGF 169
>gi|384249705|gb|EIE23186.1| hypothetical protein COCSUDRAFT_66208 [Coccomyxa subellipsoidea
C-169]
Length = 228
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
P +VA K K L G +V+I+++N G S AY+V +TD W + F+ + ++
Sbjct: 44 PHLVARKFLPGKDLVVG-RNTTVAIELYNAGKSAAYEVVVTDGEWQSEYFEFDPEAMVET 102
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAA-LQEAYSTPM 137
ER+ AG + F L G +PA IT+++ A LQ A ST M
Sbjct: 103 VERIPAGATVRVEFTLIPVKVGSGITAPAQITYKLEEGAKNLQTAVSTTM 152
>gi|312074114|ref|XP_003139825.1| hypothetical protein LOAG_04240 [Loa loa]
gi|307765012|gb|EFO24246.1| hypothetical protein LOAG_04240 [Loa loa]
Length = 193
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 26 SDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGN 84
+D IVA K + G + + + ++N G A V+L D D +P FDVI G
Sbjct: 24 NDSAHIVASKFTLSQYAVEGMDYV-IDYRLYNVGEKAALRVTLDDRDGFPTQAFDVIRGL 82
Query: 85 ISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAA--LQEAYSTPMLPLDV 142
+ WER+ G +SHS + + G F+ S A IT+ PT+ A ++ +Y+T
Sbjct: 83 LQVRWERIGPGNNVSHSVVVRPRAVGAFNYSSAQITY-YPTEDAKEVRVSYTTA------ 135
Query: 143 LAEKPTENKLELAKRLLAKYGSQISVISIIVLFV 176
P E + K K+ +++ V I ++ V
Sbjct: 136 ----PGEGYIYRRKDYDRKFSAKVGVWLIFLMLV 165
>gi|290982584|ref|XP_002674010.1| hypothetical protein NAEGRDRAFT_80788 [Naegleria gruberi]
gi|284087597|gb|EFC41266.1| hypothetical protein NAEGRDRAFT_80788 [Naegleria gruberi]
Length = 224
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%)
Query: 48 RISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107
I+ +I + N G TAYD+ + D+ WP+ +F++ G S+E++ +S+ + + K
Sbjct: 71 NITFTITVINVGEETAYDIDVKDNEWPEAQFELAEGETKASFEKVAPNDRVSYKYTIVPK 130
Query: 108 VKGMFHGSPALITFRIPTKAALQE 131
G + AL T+R+ A E
Sbjct: 131 SVGEINTQHALATYRLAPAAEKDE 154
>gi|225715560|gb|ACO13626.1| Translocon-associated protein subunit beta precursor [Esox lucius]
Length = 184
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A +V L+DDS P + F ++SG ++ W+R+
Sbjct: 28 KSLLNRYAVEGRDLTLQYNIYNVGSSAALEVELSDDSSPPEDFGIVSGMLNVKWDRIAPA 87
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A +++ + Y++ +LA++ + +
Sbjct: 88 SNVSHTVVLRPLKAGYFNFTSASVSYLAQEGGQVVVGYTSAPGQGGILAQREFDRRF 144
>gi|170588937|ref|XP_001899230.1| signal sequence receptor beta-like protein [Brugia malayi]
gi|158593443|gb|EDP32038.1| signal sequence receptor beta-like protein, putative [Brugia
malayi]
Length = 193
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 26 SDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGN 84
+D IVA K + G + I + ++N G A V+L D D +P FDVI G
Sbjct: 24 NDSAHIVASKFTLSQYAVEGMDYI-IDYRLYNVGDKAALRVALDDRDGFPTQTFDVIQGL 82
Query: 85 ISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAA--LQEAYSTPMLPLDV 142
+ WER+ G +SHS + + G F+ S A IT+ PT+ A ++ +Y+T
Sbjct: 83 LQVRWERIAPGNNVSHSVVVRPRAVGAFNYSSAQITY-YPTEDAKEVRVSYTT------- 134
Query: 143 LAEKPTENKLELAKRLLAKYGSQISVISIIVLFV 176
P E + K K+ +++ V + ++ V
Sbjct: 135 ---APGEGYIYRRKDYDRKFSAKVGVWLVFLMLV 165
>gi|32966898|gb|AAP92327.1| translocon-associated protein beta [Branchiostoma belcheri
tsingtauense]
Length = 187
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 4/141 (2%)
Query: 13 LIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDS 72
+ L ++ S A +V ++A K + L G + ++V+ I+N GTS A V LTD+
Sbjct: 9 IFGLVCLAGS-ADDNVARLLAAKHVQNQYLVEGRD-LTVTYSIYNVGTSAALSVQLTDEG 66
Query: 73 WPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAAL-QE 131
+P+ F V G + +W R+ G ++HS L G F+ + A +++ +P++ A Q
Sbjct: 67 FPESDFKVKHGMPTVNWARIAPGTNVTHSIVLTPLKSGKFNFTAAELSY-VPSEGAQPQI 125
Query: 132 AYSTPMLPLDVLAEKPTENKL 152
Y++ ++ E+ + K
Sbjct: 126 GYTSGPGEGGIMPERDYDRKF 146
>gi|417408313|gb|JAA50717.1| Putative translocon-associated protein subunit beta isoform 2,
partial [Desmodus rotundus]
Length = 168
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++ W+R+
Sbjct: 33 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 92
Query: 96 GILSHSFELDAKVKGMFHGSPA 117
+S D V F +P
Sbjct: 93 SNVSXXXXEDGPVVVGFTSAPG 114
>gi|291241246|ref|XP_002740523.1| PREDICTED: signal sequence receptor, beta-like [Saccoglossus
kowalevskii]
Length = 189
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%)
Query: 10 ISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLT 69
+ +I + L++ + D + K L + + ++V+ +I+N G+S A V L
Sbjct: 4 FTAVIGILLLAGFCQTEDTGARLLASKNILNQWLVEGKDLTVAYNIYNVGSSAALKVELR 63
Query: 70 DDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAAL 129
D+++P F + G +W+RL G +SH+ + G F+ + A I++ A
Sbjct: 64 DETFPTSDFQNVHGKYVVTWDRLAPGSNVSHTVIVRPLQAGFFNFTAATISYIPQEDAQP 123
Query: 130 QEAYST 135
Q Y++
Sbjct: 124 QFGYTS 129
>gi|225719752|gb|ACO15722.1| Translocon-associated protein subunit beta precursor [Caligus
clemensi]
Length = 199
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 12 VLIALFLISSSFA-------SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY 64
V++ LF +S + SS V ++ K+ K L G + I + I+N G A
Sbjct: 9 VVLGLFTCTSVYGEGSDPSSSSKVAHLLLSKQVQNKYLVEGMD-IVIKYGIYNVGDLPAV 67
Query: 65 DVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIP 124
DVS+ + +P+D FD++SG+ S +R+ +H+ + K G F+ + A I +R+
Sbjct: 68 DVSVKEVGFPEDSFDLVSGHASFKLDRVPPHSNNTHTLVVRPKKFGYFNFTSAEIKYRVS 127
Query: 125 TKA 127
+A
Sbjct: 128 EEA 130
>gi|324515103|gb|ADY46091.1| Translocon-associated protein subunit beta [Ascaris suum]
Length = 211
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 55 IHNQGTSTAYDVSLTD-DSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFH 113
++N G TA V+L D D++P F++I G + WER+ G +SHS + + G F+
Sbjct: 70 LYNIGDKTAMKVTLDDRDAFPTQAFEIIRGLLQVRWERIAPGQNVSHSVVVRPRAVGAFN 129
Query: 114 GSPALITF 121
S A IT+
Sbjct: 130 YSAAQITY 137
>gi|395845453|ref|XP_003795451.1| PREDICTED: translocon-associated protein subunit beta [Otolemur
garnettii]
Length = 191
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
L V++ALF ++ + + + K+ L R +++ +I+N G+S A DV L
Sbjct: 4 LAFVVLALFAVTQAEEGARL----LASKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVEL 59
Query: 69 TDDSWPQDKFDVISGNISQSWERL 92
+DDS+P + F ++SG ++ W+R+
Sbjct: 60 SDDSFPPEDFGIVSGMLNVKWDRI 83
>gi|307110682|gb|EFN58918.1| hypothetical protein CHLNCDRAFT_140871 [Chlorella variabilis]
Length = 228
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 46 AERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELD 105
++ +V+I I+N G + A V LT+ SWP + F + G ++ S++R+ G + H+++L
Sbjct: 59 GKQTTVTISIYNAGKAPATGVKLTEASWPPEGF-AVEGELTASFDRIPEGASVQHTYKLT 117
Query: 106 AK 107
K
Sbjct: 118 GK 119
>gi|340367721|ref|XP_003382402.1| PREDICTED: translocon-associated protein subunit beta-like
[Amphimedon queenslandica]
Length = 186
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
++V I+N G+S A DV LTDDS+ F+++ G +S SW+R+ G ++H+ L
Sbjct: 43 MTVRYTIYNTGSSVARDVKLTDDSFSSTDFELVHGLMSVSWDRIPNSGNVTHTVILRPLS 102
Query: 109 KGMFH 113
G+++
Sbjct: 103 SGIYN 107
>gi|281204862|gb|EFA79057.1| translocon-associated protein subunit beta [Polysphondylium
pallidum PN500]
Length = 186
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 31 IVAHKKASL---KRLKSG---AERISVSIDIHNQGTSTAYDVSLTDDSWPQD--KFDVIS 82
+ A KA L K++ G + + +S I+N G AYD++ TD + F+++
Sbjct: 16 VCAASKAELLFQKKIVDGPVVGKELEISFVIYNVGEGPAYDLAFTDSDFTASGSTFEIVK 75
Query: 83 GNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
G + WE L+AG +S + + +G++ +P ++++R
Sbjct: 76 GTTNGKWEVLEAGTNVSQTLTVVPSTQGIYPLTPTVLSYR 115
>gi|67083809|gb|AAY66839.1| signal sequence receptor beta [Ixodes scapularis]
Length = 191
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
+K L R I V +I+N G S A DV + D+S+ + F+V+SG + +RL
Sbjct: 31 QKRILNRYLVEGRDIIVDYNIYNVGGSAALDVKVVDNSFGEGDFEVVSGLLKFKLDRLPP 90
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFR 122
G ++H+ + A G F+ + A +T+R
Sbjct: 91 GSNVTHTAVVRAIKYGRFNFTSAEVTYR 118
>gi|449513277|ref|XP_002198396.2| PREDICTED: translocon-associated protein subunit beta-like, partial
[Taeniopygia guttata]
Length = 142
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
S A DV L+DDS+P + F ++SG +S W+R+ +SH+ L G F+ + A IT
Sbjct: 11 SAALDVELSDDSFPPEDFGIVSGMLSVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATIT 70
Query: 121 FRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+ A + +++ +LA++ + +
Sbjct: 71 YLAQEGAQVVAGFTSAPGQGGILAQRDFDRRF 102
>gi|241740497|ref|XP_002414113.1| signal sequence receptor beta [Ixodes scapularis]
gi|215507967|gb|EEC17421.1| signal sequence receptor beta [Ixodes scapularis]
gi|442756205|gb|JAA70262.1| Putative signal sequence receptor beta [Ixodes ricinus]
Length = 191
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
+K L R I V +I+N G S A DV + D+S+ + F+V+SG + +RL
Sbjct: 31 QKRILNRYLVEGRDIIVDYNIYNVGGSAALDVKVVDNSFGEGDFEVVSGLLKFKLDRLPP 90
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFR 122
G ++H+ + A G F+ + A +T+R
Sbjct: 91 GSNVTHTAVVRAIKYGRFNFTSAEVTYR 118
>gi|55724918|emb|CAH89318.1| TRAP beta protein [Ambystoma mexicanum]
Length = 121
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K+ L R + + + +I+N G+S A DV L+DDS F ++SG ++ W+R+
Sbjct: 1 KSLLNRYSVEGKDLRLQYNIYNVGSSAALDVDLSDDS-----FGIVSGMLNVKWDRIAPA 55
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKL 152
+SH+ L G F+ + A IT+ YS+ +LA++ + +
Sbjct: 56 SNVSHTVVLRPLKAGYFNFTSATITYVAQEGGQPVVGYSSAPGQGGILAQREFDRRF 112
>gi|15636691|gb|AAL02141.1| signal sequence receptor beta chain precursor [Branchiostoma
belcheri]
Length = 105
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 24 ASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG 83
A +V ++A K + L G + ++V+ I+N GTS A V LTD+ +P+ F V G
Sbjct: 23 ADDNVARLLAAKHVQNQYLVEGRD-LTVTYSIYNVGTSAALSVQLTDEGFPESDFKVKHG 81
Query: 84 NISQSWERLDAGGILSHSFEL 104
+ +W R+ G ++HS L
Sbjct: 82 MPTVNWARIAPGTNVTHSIVL 102
>gi|196014934|ref|XP_002117325.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190580078|gb|EDV20164.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 166
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
+K L + + + ++ +I+N G TA +V L DD D ++ G + W+R+
Sbjct: 9 RKNVLNNMVVENKELVINYEIYNVGQGTATEVELQDDIISGDSMKLVRGILPVVWDRIPP 68
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKLEL 154
GG ++H+ L G ++ + A I++ + Q + ST + V+ EK + K
Sbjct: 69 GGNVTHAVVLKPIKVGPYNFTSARISYTMNENGDRQLSLSTALGVTSVMNEKEYDRKHSP 128
Query: 155 AKRLLAKYGSQISVISI-IVLFVYLITSPSKSAAKGSKKKR 194
A +G +++I I++ YL+ SKS K K+
Sbjct: 129 HLTDWAIFG----LLNIPIIVIPYLMWYSSKSKYYTPKAKK 165
>gi|308489704|ref|XP_003107045.1| CRE-TRAP-2 protein [Caenorhabditis remanei]
gi|308252933|gb|EFO96885.1| CRE-TRAP-2 protein [Caenorhabditis remanei]
Length = 188
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 30 FIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGNISQS 88
F++AHK+ L + I+N G A V+L D S+P + F+++ G +
Sbjct: 26 FVLAHKQ-PLSTYAVENMDFVLEYGIYNVGDKPAQKVTLDDRHSFPTNSFEIVKGLLHVH 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
+E++ AGG ++HS + + G F+ + A +T+
Sbjct: 85 FEKIPAGGNVTHSVVIRPRAYGFFNYTAAQVTY 117
>gi|170291156|ref|YP_001737972.1| hypothetical protein Kcr_1543 [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175236|gb|ACB08289.1| hypothetical protein Kcr_1543 [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 287
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I V++ + N GT+ A V++ DD +P+D F ++SG+ + L GG+L+ S++L A
Sbjct: 7 IEVNVIVSNNGTAAASKVTIEDD-FPRDLFKLVSGDTKLTASSLSPGGVLALSYKLRAVR 65
Query: 109 KGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISV 168
G+ A +T+ P + + S+ P+ V KP EL+ R+ + +V
Sbjct: 66 DGIATFGSAKVTYIDPQEGQ-KTILSSMKSPVVVTIVKP-----ELSVRIEDIPPNVTNV 119
Query: 169 ISIIVLFVYLITSPSKSAAK 188
S+I +Y++ + A K
Sbjct: 120 NSLIQFSIYMMNKGNGDAKK 139
>gi|390358459|ref|XP_003729262.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Strongylocentrotus purpuratus]
Length = 186
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
++V I+N G+S A V L D+S+ + F V+SG + W+R+ ++H+ L
Sbjct: 41 MTVLYTIYNVGSSAASQVVLNDESFAESDFAVVSGQLKVQWDRISPASNVTHAVILQPLK 100
Query: 109 KGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQISV 168
G ++ + A +T+ + + AY++ V+A K + + A + + +++
Sbjct: 101 NGFYNVTHATVTYVPSEGSEARTAYTSAPGKAGVVAVKDYDRRFSPHYMDWAAF-AVMTI 159
Query: 169 ISIIVLFVYLITSPSKSAAKGSKKKR 194
I + F+ S SK A K K+
Sbjct: 160 APIGIPFLLWFRSKSKYEALSFKTKK 185
>gi|91092204|ref|XP_969577.1| PREDICTED: similar to signal sequence receptor beta subunit
[Tribolium castaneum]
gi|270014481|gb|EFA10929.1| hypothetical protein TcasGA2_TC001756 [Tribolium castaneum]
Length = 190
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 12 VLIALFLISSSFASSDV---PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
V+I L++S+F +++ P ++ K+ L R + I V ++N GTS A V L
Sbjct: 5 VVIFAALLASAFCNTEEETGPRLLVSKQI-LNRYLVENKDIEVKYTLYNVGTSAAVGVQL 63
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
D+ + + F+V+ G++S +ER+ +SH + K G F+ + A T++
Sbjct: 64 VDNGFHPEAFEVVGGHLSAKFERILPQTNVSHVVVVRPKRYGYFNFTSAEATYK 117
>gi|390358461|ref|XP_792530.2| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Strongylocentrotus purpuratus]
Length = 211
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
++V I+N G+S A V L D+S+ + F V+SG + W+R+ ++H+ L
Sbjct: 66 MTVLYTIYNVGSSAASQVVLNDESFAESDFAVVSGQLKVQWDRISPASNVTHAVILQPLK 125
Query: 109 KGMFHGSPALITFRIPTKAA-LQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQIS 167
G ++ + A +T+ +P++ + + AY++ V+A K + + A + + ++
Sbjct: 126 NGFYNVTHATVTY-VPSEGSEARTAYTSAPGKAGVVAVKDYDRRFSPHYMDWAAF-AVMT 183
Query: 168 VISIIVLFVYLITSPSKSAAKGSKKKR 194
+ I + F+ S SK A K K+
Sbjct: 184 IAPIGIPFLLWFRSKSKYEALSFKTKK 210
>gi|225708928|gb|ACO10310.1| Translocon-associated protein subunit beta precursor [Caligus
rogercresseyi]
Length = 199
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 25 SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN 84
+S V ++ K+ K L G + I V I+N G A DVS+++ +P D FDV+SG
Sbjct: 29 NSKVAQLLLSKQVQNKYLVEGMD-IVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQ 87
Query: 85 ISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKA 127
S +R+ +H+ + K G F + A + +R+ +A
Sbjct: 88 TSFKLDRIPPHSNNTHTLVVRPKKFGYFSFTSAEVKYRVSEEA 130
>gi|290562754|gb|ADD38772.1| Translocon-associated protein subunit beta [Lepeophtheirus
salmonis]
Length = 198
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
K+ K L G + I V I+N G A DV + + +P+D FDV+SG+ S +R+
Sbjct: 38 KQVQNKYLVEGMD-IVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPP 96
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFRIPTKA 127
+H+ + K G F+ + A + +R+ +A
Sbjct: 97 HSNNTHTLVVRPKKFGYFNFTSAEVQYRVSDEA 129
>gi|225712622|gb|ACO12157.1| Translocon-associated protein subunit beta precursor
[Lepeophtheirus salmonis]
gi|225714650|gb|ACO13171.1| Translocon-associated protein subunit beta precursor
[Lepeophtheirus salmonis]
Length = 198
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
K+ K L G + I V I+N G A DV + + +P+D FDV+SG+ S +R+
Sbjct: 38 KQVQNKYLVEGMD-IVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPP 96
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFRIPTKA 127
+H+ + K G F+ + A + +R+ +A
Sbjct: 97 HSNNTHTLVVRPKKFGYFNFTSAEVKYRVSDEA 129
>gi|225712054|gb|ACO11873.1| Translocon-associated protein subunit beta precursor
[Lepeophtheirus salmonis]
Length = 198
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
K+ K L G + I V I+N G A DV + + +P+D FDV+SG+ S +R+
Sbjct: 38 KQVQNKYLVEGMD-IVVKYAIYNIGEQPAVDVQVKEVGFPEDSFDVVSGHASFKLDRIPP 96
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFRIPTKA 127
+H+ + K G F+ + A + +R+ +A
Sbjct: 97 HSNNTHTLVVRPKKFGYFNFTSAEVKYRVSDEA 129
>gi|268637986|ref|XP_641369.2| translocon-associated protein subunit beta [Dictyostelium
discoideum AX4]
gi|182691581|sp|Q54VI6.2|SSRB_DICDI RecName: Full=Translocon-associated protein subunit beta;
Short=TRAP-beta; AltName: Full=Signal sequence receptor
subunit beta; Short=SSR-beta; Flags: Precursor
gi|256012964|gb|EAL67383.2| translocon-associated protein subunit beta [Dictyostelium
discoideum AX4]
Length = 184
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 7 KSLISVLIALFLISSSFASSDVPFIVAHKKASL---KRLKSG---AERISVSIDIHNQGT 60
K++IS+ + LF V F+ A L K++ G + + + I+N G+
Sbjct: 4 KTVISLFLVLF----------VSFVYCENGAELLFHKKIVEGPVVGKELPIQFIIYNVGS 53
Query: 61 STAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120
AYD+S D+ + +F+ +SG+ WE L + + + K G++ + ++
Sbjct: 54 EPAYDISFIDNDFSNAEFEFVSGSSEGKWETLAPNSQVQTNLTVIPKKSGIYSLTSTVLN 113
Query: 121 FR 122
+R
Sbjct: 114 YR 115
>gi|121543875|gb|ABM55602.1| putative signal sequence receptor beta subunit [Maconellicoccus
hirsutus]
Length = 196
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)
Query: 6 SKSLISVLIALFLIS-SSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY 64
S L+ +A FL+S SS D + K L + I + I+N G A
Sbjct: 3 STKLVLFALATFLVSCSSLEEEDTTARLLISKHILNKYLVQDMDIVIKYTIYNVGNGPAQ 62
Query: 65 DVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIP 124
+V + D+S+P D F V G ++ +R+ +SH+ + K G F+ S A + ++
Sbjct: 63 EVVINDESFPADAFVVAGGQLNVRIDRIPPQTNVSHTVVVRPKTFGSFNFSSAYVQYKAS 122
Query: 125 TKAA-LQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQI---------SVISIIVL 174
A LQ A S+ +P E ++ + K+ + ++ SIIV
Sbjct: 123 ESATELQSAVSS----------EPGEGRIINFRDYDKKFSPHVLDWAAFAIMTMPSIIVP 172
Query: 175 FVYLITSPSKSAAKGSKKKR 194
F+ +S +K A +K+
Sbjct: 173 FILFWSSKTKYEAIAKQKRE 192
>gi|341898890|gb|EGT54825.1| hypothetical protein CAEBREN_20265 [Caenorhabditis brenneri]
Length = 188
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 9/135 (6%)
Query: 30 FIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGNISQS 88
FI+AHK+ L + ++N G A V++ D S+P + F++I G +
Sbjct: 26 FILAHKQ-PLSTYAVENMDFVLEYGLYNVGDKAAQKVTIDDRHSFPTNSFEIIKGLLHVH 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
+E++ AG ++HS + + G F+ + A +T+ + +TP E
Sbjct: 85 YEKIPAGTNVTHSVVIRPRAYGFFNYTAAQVTYYTDNENLHVTLTNTP-------GEGYI 137
Query: 149 ENKLELAKRLLAKYG 163
+ E +R KYG
Sbjct: 138 YKQREYDRRFAPKYG 152
>gi|389608539|dbj|BAM17879.1| signal sequence receptor beta [Papilio xuthus]
Length = 190
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 13 LIALFLISSSFASSDVPFIVAH---KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLT 69
L++L L+ ++ ++D VA K L + I V ++N GT+ A DV L
Sbjct: 5 LLSLILVIAAAVTADEEAAVARLLVSKQVLNKYLVENMDILVKYTLYNVGTAPAVDVKLV 64
Query: 70 DDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
D+ + D F+V+ G ++ +R+ +SH + + G F+ + A +T+R
Sbjct: 65 DNGFHPDVFEVVGGQLTAEIDRIPPQTNVSHVVTVRSNRFGYFNFTAAEVTYR 117
>gi|225710348|gb|ACO11020.1| Translocon-associated protein subunit beta precursor [Caligus
rogercresseyi]
Length = 199
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 25 SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN 84
+S V ++ K+ K L G + I V I+N G A DVS+++ +P D FDV SG
Sbjct: 29 NSKVAQLLLSKQVQNKYLVEGMD-IVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVASGQ 87
Query: 85 ISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKA 127
S +R+ +H+ + K G F+ + A + +R+ +A
Sbjct: 88 TSFKLDRIPPHSNNTHALVVRPKKFGYFNFTSAEVKYRVSEEA 130
>gi|427783565|gb|JAA57234.1| Putative translocon-associated complex trap beta subunit
[Rhipicephalus pulchellus]
Length = 189
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
+K L + + I V +I+N G S A D+ L+D+S+ F+V SG +S RL
Sbjct: 29 QKRILNKFLVEGKDIIVDYNIYNVGGSAALDIKLSDNSFNPAYFEVTSGLLSFKLNRLAP 88
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFR 122
G ++H+ + G F+ + A +++R
Sbjct: 89 GSNVTHTIVIRPLTFGYFNFTSADVSYR 116
>gi|239793475|dbj|BAH72851.1| ACYPI007611 [Acyrthosiphon pisum]
Length = 132
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 9 LISVLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL 68
+++++ +SS A S ++ K+ L +L I V I+N G+ A +V L
Sbjct: 9 IVALICTSLTVSSQNADSQQARLLVSKQV-LNKLLVQDSDILVKYTIYNVGSVPATNVVL 67
Query: 69 TDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
D +P + F + GN++ + R+ +G ++H+ + G F+ + A++ ++
Sbjct: 68 QDSGFPDEAFATVKGNLNIRFNRIPSGANVTHAVVIKPLTYGRFNFTAAVVQYK 121
>gi|255073713|ref|XP_002500531.1| translocon-associated complex trap beta subunit [Micromonas sp.
RCC299]
gi|226515794|gb|ACO61789.1| translocon-associated complex trap beta subunit [Micromonas sp.
RCC299]
Length = 224
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 20/156 (12%)
Query: 11 SVLIALFLISSSF---ASSDVP---FIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY 64
+ L+ALF+ ++ F + + P ++ HK L G +++ I ++N G + A
Sbjct: 9 ATLVALFVAAALFQGVVADNAPTSAHLIVHK------LIIG-RNMTIEITLYNAGETAAT 61
Query: 65 DVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIP 124
V + D W F ++ + S + + +H F + KV G F P+L+++
Sbjct: 62 GVEINDPGWDSSSFAMLGPSTSAKFASIPPLTKKTHRFVVVPKVTGQFSAGPSLVSY--- 118
Query: 125 TKAALQEAYST--PMLPLDVLAEKPTENKLELAKRL 158
T A +A T + PL +L P E K+E+A ++
Sbjct: 119 TAGAGHQASGTSNALDPLPIL--TPWEAKVEVAMKI 152
>gi|346464523|gb|AEO32106.1| hypothetical protein [Amblyomma maculatum]
Length = 195
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWE 90
+ K+ K L G + I V +I+N G S A D+ + D+S+ F V SG +S
Sbjct: 32 VTCTKRILNKYLVEGRD-IVVDYNIYNVGGSAALDIKVVDNSFNPQHFQVTSGLLSFKLN 90
Query: 91 RLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
RL G ++H+ + G F+ + A +++R
Sbjct: 91 RLAPGSNVTHTVVVRPLTPGRFNFTSAEVSYR 122
>gi|355722016|gb|AES07446.1| signal sequence receptor, beta [Mustela putorius furo]
Length = 79
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNIS 86
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++SG ++
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLN 77
>gi|268576545|ref|XP_002643252.1| C. briggsae CBR-TRAP-2 protein [Caenorhabditis briggsae]
Length = 188
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 9/144 (6%)
Query: 30 FIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGNISQS 88
FI+AHK+ L + ++N G A V++ D S+P + F+++ G +
Sbjct: 26 FILAHKQP-LSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFEIVKGLLHVH 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
+E++ AG ++HS + + G F+ + A +T+ + +TP E
Sbjct: 85 YEKIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNENLHVTLTNTP-------GEGYI 137
Query: 149 ENKLELAKRLLAKYGSQISVISII 172
+ E +R KY I II
Sbjct: 138 YRQREYDRRFAPKYTYFIVFFLII 161
>gi|17569613|ref|NP_508150.1| Protein TRAP-2 [Caenorhabditis elegans]
gi|74965890|sp|Q22169.1|SSRB_CAEEL RecName: Full=Translocon-associated protein subunit beta; Flags:
Precursor
gi|351020735|emb|CCD62717.1| Protein TRAP-2 [Caenorhabditis elegans]
Length = 188
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 17/155 (10%)
Query: 30 FIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGNISQS 88
FI+AHK+ L + ++N G A V++ D S+P + FD++ G +
Sbjct: 26 FILAHKQP-LSTYAVENMDFVLEYGLYNVGDKPAQKVTIDDRHSFPTNSFDIVKGLLFVH 84
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPT 148
+E++ AG ++HS + + G F+ + A +T+ + +TP E
Sbjct: 85 FEQIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNENHHVTLTNTP-------GEGYI 137
Query: 149 ENKLELAKRLLAKYGSQISVISIIVLFVYLITSPS 183
+ E +R KY L +LI +P+
Sbjct: 138 YRQREYDRRFAPKY--------TYFLVFFLIVAPT 164
>gi|156550476|ref|XP_001602398.1| PREDICTED: translocon-associated protein subunit beta-like isoform
1 [Nasonia vitripennis]
gi|345488529|ref|XP_003425930.1| PREDICTED: translocon-associated protein subunit beta-like isoform
2 [Nasonia vitripennis]
Length = 192
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%)
Query: 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKG 110
V ++N G++ A +V +TD+S+ D F +SG +S +R+ ++H+ + + G
Sbjct: 48 VKYTVYNTGSAAALEVEITDNSFDPDNFAHVSGELSARIDRVPPNTNVTHTVVVRPRKPG 107
Query: 111 MFHGSPALITFR 122
F+ + A + +R
Sbjct: 108 YFNFTSAEVLYR 119
>gi|170038790|ref|XP_001847231.1| translocon-associated protein subunit beta [Culex quinquefasciatus]
gi|167882477|gb|EDS45860.1| translocon-associated protein subunit beta [Culex quinquefasciatus]
Length = 194
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 5 ISKSLISVLIALFLISS-SFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTA 63
+ ++ +VL+ LF +S A+ D + K L + I V ++N GT A
Sbjct: 1 MRNAVYAVLLGLFALSHLGLANEDSSARLLVSKQILNKYLVENRDIVVKYTVYNVGTGAA 60
Query: 64 YDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRI 123
+V L D+ + + F V+ G ++ + +R+ ++H + K G F+ + A + ++
Sbjct: 61 TNVQLVDNGFHPEAFTVVGGQLTATIDRIAPQTNVTHIAVVRPKAFGYFNFTAAEVNYQ- 119
Query: 124 PTKAA 128
PT+ A
Sbjct: 120 PTEEA 124
>gi|307209959|gb|EFN86736.1| Translocon-associated protein subunit beta [Harpegnathos saltator]
Length = 197
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + I+N G A++V +TD+S+ D F +SG ++ +R+ +SH+ + +
Sbjct: 44 IVIKYTIYNIGNVAAFEVEITDNSFHPDHFTHVSGEVNARIDRVPPYTNVSHTVVVRPRK 103
Query: 109 KGMFHGSPALITFR 122
G F+ + A + +R
Sbjct: 104 FGFFNFTSAEVLYR 117
>gi|114153022|gb|ABI52677.1| translocon associated complex TRAP beta-subunit [Argas
monolakensis]
Length = 202
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 35 KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDA 94
+K L R I V +I+N G S A DV + D S+ D F V+SG + +RL
Sbjct: 29 QKRILNRYLVEGRDIIVDYNIYNVGGSVALDVRIVDSSFGGD-FQVVSGLLDLKVDRLPP 87
Query: 95 GGILSHSFELDAKVKGMFHGSPALITFR 122
LSH+ + + G F+ + A + +R
Sbjct: 88 NANLSHTVVVRSSKPGRFNFTGAEVYYR 115
>gi|225711116|gb|ACO11404.1| Translocon-associated protein subunit beta precursor [Caligus
rogercresseyi]
Length = 192
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 25 SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN 84
+S V ++ K+ K L G + I V I+N G A DVS+++ +P D FDV+SG
Sbjct: 29 NSKVAQLLLSKQVQNKYLVEGMD-IVVKYGIYNIGDLPAVDVSVSEMGFPDDSFDVVSGQ 87
Query: 85 ISQSWERLDAGGILSHSFELDAKVKGMFH 113
S +R+ +H+ + K G F+
Sbjct: 88 TSFKLDRIPPHSNNTHTLVVRPKKFGYFN 116
>gi|303273178|ref|XP_003055950.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462034|gb|EEH59326.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 219
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG--NISQS 88
++ HK S + L G + +V++ +N+G A V + D + + F +++G +I
Sbjct: 35 VILHKAVSAEPLVLG-QNFTVTLTAYNRGNIDARSVDIIDAKYDPNVFTILNGASSIMSE 93
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
++ ++ G + SFEL A G++ +PA++T+R
Sbjct: 94 FDVVEPGENATFSFELVATRLGVYTLTPAVVTYR 127
>gi|389611275|dbj|BAM19249.1| signal sequence receptor beta [Papilio polytes]
Length = 190
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 13 LIALFLISSSFASSDVPFIVAH---KKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLT 69
L++L LI ++ ++D VA K L + + V ++N GT+ A +V L
Sbjct: 5 LLSLILIIAAAVTADEEAPVARLLVSKQVLNKYLVENMDVLVKYTLYNVGTAPAVEVKLI 64
Query: 70 DDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
D + D F+V+ G ++ +R+ +SH + + G F+ + A +T+R
Sbjct: 65 DTGFHPDVFEVVGGQLTAEIDRIPPQTNVSHVVTVRSTRFGYFNFTAAEVTYR 117
>gi|198438579|ref|XP_002132080.1| PREDICTED: similar to SSR2 protein [Ciona intestinalis]
Length = 184
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K L + + +++ +++N G A DV L D + F++ISG +S W+R+ G
Sbjct: 29 KNILNSIITQGNDLAIEYNMYNIGDGVATDVELADSTLHDTDFELISGKMSVKWDRIQPG 88
Query: 96 GILSH 100
++H
Sbjct: 89 TNVTH 93
>gi|383856498|ref|XP_003703745.1| PREDICTED: translocon-associated protein subunit beta-like
[Megachile rotundata]
Length = 191
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + ++N G + A +V +TD+S+ D F +SG I+ +R+ +SH+ + +
Sbjct: 45 IVIKYTVYNVGNAAALEVEITDNSFHPDHFTHVSGEINARIDRVPPYTNVSHTVVVRPRK 104
Query: 109 KGMFHGSPALITFR 122
G F+ + A + +R
Sbjct: 105 FGYFNFTSAEVLYR 118
>gi|332375172|gb|AEE62727.1| unknown [Dendroctonus ponderosae]
Length = 194
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAG 95
K L R + I V IHN G + A +V LTD + + F+++ G++S + R+
Sbjct: 34 KQILNRYLVQGKDIEVRYAIHNIGKAPAVNVQLTDVGFNSEAFEIVGGHLSTKFARIPPE 93
Query: 96 GILSHSFELDAKVKGMFHGSPALITFRI--PTKAALQEAYST 135
+H + G F+ + + I++++ A Q +YS+
Sbjct: 94 SNFTHVVVVRPNRFGFFNFTSSQISYKLSDAPDAKTQVSYSS 135
>gi|154417205|ref|XP_001581623.1| hypothetical protein [Trichomonas vaginalis G3]
gi|154417211|ref|XP_001581626.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915852|gb|EAY20637.1| hypothetical protein TVAG_163330 [Trichomonas vaginalis G3]
gi|121915855|gb|EAY20640.1| hypothetical protein TVAG_163360 [Trichomonas vaginalis G3]
Length = 187
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQS 88
PFIV KK S K G E I+ I NQG ST D+S+ ++ P + + + S
Sbjct: 28 PFIVFDKKLSSVSGKVG-EPINCYYVIINQGDSTVTDLSIVENGIPSEAWSFSGDSSILS 86
Query: 89 WERLDAGGILSHSFELDAKVKGMFHGSPALITF 121
W+ L G ++H F + G P+ + +
Sbjct: 87 WKSLKPGENITHIFPITPTKSGNLQIMPSTMIY 119
>gi|380023550|ref|XP_003695581.1| PREDICTED: translocon-associated protein subunit beta-like [Apis
florea]
Length = 192
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + ++N G++ A +V +TD+S+ D F +SG ++ +R+ +SH+ + +
Sbjct: 46 IVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRPRK 105
Query: 109 KGMFHGSPALITFR 122
G F+ + A + +R
Sbjct: 106 FGYFNFTSAEVLYR 119
>gi|322785544|gb|EFZ12206.1| hypothetical protein SINV_10588 [Solenopsis invicta]
Length = 202
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + I+N G A +V +TD+S+ D F +SG ++ +R+ +SH+ + +
Sbjct: 56 IVIKYTIYNTGNVAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRPRK 115
Query: 109 KGMFHGSPALITFR 122
G F+ + A + +R
Sbjct: 116 FGYFNFTSAEVLYR 129
>gi|357608662|gb|EHJ66087.1| signal sequence receptor beta subunit [Danaus plexippus]
Length = 149
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + + N GT+ A DV L D+ + + F V+ G +S +R+ +SH + +
Sbjct: 3 ILIKYTLFNVGTAPAVDVKLVDNGFHPEVFAVVGGQLSAHIDRIPPQTNVSHVVTVRSNR 62
Query: 109 KGMFHGSPALITFRIPTKAALQEAYSTPMLPLDVLAEKPTENKLELAKRLLAKYGSQI 166
G F+ + A +T++ P++ + + YS ++ P E + K K+ S I
Sbjct: 63 YGYFNFTAAEVTYK-PSEDSAEVQYS--------ISSAPGEGTIVAFKDYDRKFSSHI 111
>gi|332017836|gb|EGI58496.1| Translocon-associated protein subunit beta [Acromyrmex echinatior]
Length = 191
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + I+N G A +V +TD+S+ D F +SG ++ +R+ +SH+ + +
Sbjct: 45 IVIKYTIYNTGNVAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVVVRPRK 104
Query: 109 KGMFHGSPALITFR 122
G F+ + A + +R
Sbjct: 105 FGYFNFTSAEVLYR 118
>gi|148683320|gb|EDL15267.1| signal sequence receptor, beta, isoform CRA_b [Mus musculus]
Length = 164
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVIS 82
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++S
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVS 73
>gi|149048120|gb|EDM00696.1| signal sequence receptor, beta (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 164
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 36 KASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVIS 82
K+ L R +++ +I+N G+S A DV L+DDS+P + F ++S
Sbjct: 27 KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVS 73
>gi|195135078|ref|XP_002011962.1| GI16699 [Drosophila mojavensis]
gi|193918226|gb|EDW17093.1| GI16699 [Drosophila mojavensis]
Length = 190
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKG 110
V I N G A +V L D+ + D F+V+ G S + ER+ +H + K G
Sbjct: 47 VRYTIFNVGNGAATNVQLVDNGFHPDAFEVVGGQPSATVERIAPQTNFTHVLVVRPKAFG 106
Query: 111 MFHGSPALITFR-IPTKAALQEAYST 135
F+ + A ++++ I LQ A S+
Sbjct: 107 YFNFTAAEVSYKPIEEAEMLQLAISS 132
>gi|320167466|gb|EFW44365.1| signal sequence receptor beta [Capsaspora owczarzaki ATCC 30864]
Length = 192
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 8 SLISVLIALF-LISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDV 66
+L+ V +A+ + +FA D +I+A K L + I++ + N G A +
Sbjct: 5 TLLLVAVAVMACVGGAFA--DSAYILASKSILNNYLVENMD-ITIQYSLFNIGEGAASSI 61
Query: 67 SLTDDSWPQDKFDVISGNISQSWERLDAGGILSH 100
L D +PQ+ F++++G+ S W+ L AG ++H
Sbjct: 62 QLLD-YFPQEGFNIVAGSTSAKWDHLAAGANVTH 94
>gi|66501038|ref|XP_623954.1| PREDICTED: translocon-associated protein subunit beta isoform 2
[Apis mellifera]
gi|328792432|ref|XP_003251723.1| PREDICTED: translocon-associated protein subunit beta isoform 1
[Apis mellifera]
Length = 191
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 41/74 (55%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + ++N G++ A +V +TD+S+ D F +SG ++ +R+ +SH+ + +
Sbjct: 45 IVIKYTVYNIGSAAALEVEITDNSFHPDHFTHVSGELNARIDRVPPYTNVSHTVIVRPRK 104
Query: 109 KGMFHGSPALITFR 122
G F+ + A + +R
Sbjct: 105 FGYFNFTSAEVLYR 118
>gi|167517247|ref|XP_001742964.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778063|gb|EDQ91678.1| predicted protein [Monosiga brevicollis MX1]
Length = 180
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDK--FDVISGNISQSWERLDAGGILSHSFELDA 106
+++ ++N G + A D++L+D S+ ++ F ++SG S ++ L +SH + A
Sbjct: 38 LTIRYSLYNTGDAEATDITLSDTSFEEENSGFQLVSGLTSVNFASLTPQANVSHHVVVQA 97
Query: 107 KVKGMFHGSPALITFR 122
+ G ++ S A +T++
Sbjct: 98 EYSGYYNLSAATVTYK 113
>gi|328866294|gb|EGG14679.1| translocon-associated protein subunit beta [Dictyostelium
fasciculatum]
Length = 210
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 9 LISVLIALFL-ISSSFASSDVPFIVAHKKASLKRLKSG---AERISVSIDIHNQGTSTAY 64
L+++++ LF+ ++ S +D+ F K++ G + + +S I+N G AY
Sbjct: 30 LVALVVCLFVGVAVSSKGADLLF--------QKKISDGPVVGKELDISFIIYNVGEGAAY 81
Query: 65 DVSLTD-DSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
D+S D D F+V+ G S WE ++ +S + + G+F + ++ +R
Sbjct: 82 DISFADTDFGASADFEVVKGQSSGKWEVIEPNTNVSQTITITPSKGGVFPLTSTILEYR 140
>gi|326426652|gb|EGD72222.1| hypothetical protein PTSG_00243 [Salpingoeca sp. ATCC 50818]
Length = 184
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 46 AER-ISVSIDIHNQGTSTAYDVSLTDDSWPQDK--FDVISGNISQSWERLDAGGILSHSF 102
AER I+V + N G A D+S+TD+ + ++ F +++G S + L AG +SH+
Sbjct: 35 AERDITVRYSLFNIGEEEAKDISVTDEGFTREDSPFTLVAGLPSFNLAGLKAGANVSHNV 94
Query: 103 ELDAKVKGMFHGSPALITFRIPTKA-ALQEAYST-----PMLP 139
+ G ++ + A +T+ A A Q AYS+ P+LP
Sbjct: 95 IVRVDRPGYYNLTAARVTYFASEDADAEQVAYSSMPRDVPILP 137
>gi|321468810|gb|EFX79793.1| hypothetical protein DAPPUDRAFT_230994 [Daphnia pulex]
Length = 191
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 3/120 (2%)
Query: 12 VLIALFLISSSFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD 71
L+ +F ++++ P + K L + I + + N G + A DV + D+
Sbjct: 8 CLLVVFAVATTGNEEATPAKLLFSKQILNKYLVEGMDIVIKYSLFNVGGTAALDVQVADN 67
Query: 72 SW-PQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTKAALQ 130
++ PQD F+V+ G + + +R+ G +H + G F+ + A +T+ +P++ A +
Sbjct: 68 TFGPQD-FEVVGGQLKVTIDRIAPGSNATHVVVIRPSKFGYFNFTAAEVTY-LPSENAAE 125
>gi|93005874|ref|YP_580311.1| hypothetical protein Pcryo_1046 [Psychrobacter cryohalolentis K5]
gi|92393552|gb|ABE74827.1| protein of unknown function DUF11 [Psychrobacter cryohalolentis K5]
Length = 1757
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 19 ISSSFA-SSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDK 77
IS++ A +D+P + K+ +K G + ++ +I+I N GTSTAY+V L D+ P+
Sbjct: 325 ISTNIAIVNDIPTLQVTKEGDVKTASLG-DYVNYTINIKNDGTSTAYNVELK-DALPRG- 381
Query: 78 FDVISGNIS 86
FD + G++S
Sbjct: 382 FDYVGGSVS 390
>gi|289740131|gb|ADD18813.1| translocon-associated complex TRAP beta subunit [Glossina morsitans
morsitans]
Length = 190
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 35/72 (48%)
Query: 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKG 110
V I+N G A +V L D+ + + F+++ G + ER+ +H + K G
Sbjct: 47 VRYTIYNVGNGAATNVKLVDNGFHPEAFEIVGGQPMATIERIAPQANYTHVLVVRPKSYG 106
Query: 111 MFHGSPALITFR 122
F+ + A IT++
Sbjct: 107 YFNFTAAEITYK 118
>gi|195168305|ref|XP_002024972.1| GL17832 [Drosophila persimilis]
gi|194108402|gb|EDW30445.1| GL17832 [Drosophila persimilis]
Length = 190
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKG 110
V I N G A +V+L D+ + + F+V+ G + + ER+ +H + K G
Sbjct: 47 VRYTIFNVGNGAATNVALVDNGFHPEAFEVVGGQPTATVERIAPQTNFTHVVVVRPKAFG 106
Query: 111 MFHGSPALITFR-IPTKAALQEAYST 135
F+ + A ++++ + ALQ A S+
Sbjct: 107 YFNFTAAEVSYKPVEEAEALQLAISS 132
>gi|125976998|ref|XP_001352532.1| GA18908 [Drosophila pseudoobscura pseudoobscura]
gi|54641279|gb|EAL30029.1| GA18908 [Drosophila pseudoobscura pseudoobscura]
Length = 190
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKG 110
V I N G A +V+L D+ + + F+V+ G + + ER+ +H + K G
Sbjct: 47 VRYTIFNVGNGAATNVALVDNGFHPEAFEVVGGQPTATVERIAPQTNFTHVVVVRPKAFG 106
Query: 111 MFHGSPALITFR-IPTKAALQEAYST 135
F+ + A ++++ + ALQ A S+
Sbjct: 107 YFNFTAAEVSYKPVEEAEALQLAISS 132
>gi|224924406|gb|ACN69153.1| translocon-associated complex TRAP, beta subunit [Stomoxys
calcitrans]
Length = 192
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKG 110
V ++N G A ++ L D+ + + F+++ G S + ERL +H + K G
Sbjct: 49 VRYTLYNVGNGAATNIKLVDNGFHPEAFEIVGGKPSANVERLAPQANYTHVVVVRPKAHG 108
Query: 111 MFHGSPALITFR 122
F+ + A ++++
Sbjct: 109 YFNFTAAEVSYK 120
>gi|114052941|ref|NP_001040332.1| signal sequence receptor beta subunit precursor [Bombyx mori]
gi|87248411|gb|ABD36258.1| signal sequence receptor beta subunit [Bombyx mori]
Length = 190
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I V + N G++ A +V L D+ + D F V+ G ++ +R+ +SH + +
Sbjct: 44 ILVKYTLFNVGSAPAVEVKLVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNK 103
Query: 109 KGMFHGSPALITFR 122
G F+ S A +T++
Sbjct: 104 YGYFNFSSAEVTYK 117
>gi|313231512|emb|CBY08626.1| unnamed protein product [Oikopleura dioica]
Length = 186
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 13 LIALF-LISSSFASSDV------PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYD 65
L +F LI S+F D ++ KK K L + ++ + I+N G S A D
Sbjct: 3 LFGIFALIGSAFGQEDAQQAPVEARLLISKKTDTKILAENVD-MTFTYKIYNIGQSAALD 61
Query: 66 VSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122
V T++++ D + ++SG+ SW+ ++ ++H + G + + A++ +R
Sbjct: 62 VEFTEENFAND-WSIVSGDAKTSWKSIEPDSSVTHEIVVKPSKAGAQNITSAVLNYR 117
>gi|307169164|gb|EFN61980.1| Translocon-associated protein subunit beta [Camponotus floridanus]
Length = 191
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + I+N G A +V +TD+S+ D F +SG ++ + + +SH+ + +
Sbjct: 45 IVIKYTIYNTGNVAASEVEITDNSFHPDHFTHVSGELNARIDNVPPYTNVSHTVVVRPRK 104
Query: 109 KGMFHGSPALITFR 122
G F+ + A + +R
Sbjct: 105 SGYFNFTSAEVLYR 118
>gi|350419189|ref|XP_003492100.1| PREDICTED: translocon-associated protein subunit beta-like [Bombus
impatiens]
Length = 191
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 40/74 (54%)
Query: 49 ISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKV 108
I + ++N G++ A +V +TD+S+ D F ISG ++ +R+ +SH + +
Sbjct: 45 IVIKYTVYNVGSAAALEVEITDNSFHPDHFTHISGELNARIDRVPPYTNVSHIVVVRPRK 104
Query: 109 KGMFHGSPALITFR 122
G F+ + A + ++
Sbjct: 105 FGYFNFTSAEVLYK 118
>gi|341898172|gb|EGT54107.1| hypothetical protein CAEBREN_16446 [Caenorhabditis brenneri]
Length = 806
Score = 36.2 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 38 SLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGI 97
+LKR + E++ VS ++D+ L DD W +++ + GN+S + D G
Sbjct: 367 NLKRCLTFKEKLDVS----------SFDIFLNDDKWKVNQYYEVLGNLSAVLDEYDTDGT 416
Query: 98 LSHSFELDAKVKG 110
+ HS E K G
Sbjct: 417 ILHSLEKIRKYSG 429
>gi|383764384|ref|YP_005443366.1| hypothetical protein CLDAP_34290 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384652|dbj|BAM01469.1| hypothetical protein CLDAP_34290 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 2073
Score = 35.8 bits (81), Expect = 8.9, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 24 ASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTD 70
AS P++ K AS R+ +G E I ++ + NQGT+TAYD+ L D
Sbjct: 963 ASVRQPYLTLQKVASNNRVGAGDE-ILYTVLLRNQGTATAYDMKLRD 1008
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.130 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,728,193,196
Number of Sequences: 23463169
Number of extensions: 104760332
Number of successful extensions: 287125
Number of sequences better than 100.0: 196
Number of HSP's better than 100.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 286928
Number of HSP's gapped (non-prelim): 201
length of query: 194
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 59
effective length of database: 9,191,667,552
effective search space: 542308385568
effective search space used: 542308385568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)