Query 029361
Match_columns 194
No_of_seqs 95 out of 109
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 19:09:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029361.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029361hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3idu_A Uncharacterized protein 97.7 0.00039 1.3E-08 54.2 11.0 86 22-118 10-96 (127)
2 2l0d_A Cell surface protein; s 96.7 0.016 5.5E-07 44.3 9.9 77 29-118 3-84 (114)
3 2xzz_A Protein-glutamine gamma 94.6 0.064 2.2E-06 40.1 5.7 68 39-114 13-81 (102)
4 3hrz_B Cobra venom factor; ser 94.2 0.3 1E-05 41.1 9.8 75 39-117 89-165 (252)
5 2x3c_A Toxic extracellular end 93.6 0.079 2.7E-06 47.2 5.3 58 47-105 36-110 (343)
6 2kut_A Uncharacterized protein 93.5 0.11 3.6E-06 40.3 5.0 72 39-117 9-91 (122)
7 1vjj_A Protein-glutamine gluta 90.2 0.77 2.6E-05 44.7 8.0 79 31-115 583-671 (692)
8 2e6j_A Hydin protein; PAPD, st 88.1 0.81 2.8E-05 32.7 5.1 81 28-115 7-89 (112)
9 2ys4_A Hydrocephalus-inducing 87.7 1.6 5.4E-05 32.2 6.6 83 27-121 22-104 (122)
10 3rfr_A PMOB; membrane, oxidore 86.8 1.5 5.3E-05 40.3 7.1 73 31-106 283-368 (419)
11 1ex0_A Coagulation factor XIII 86.0 2.2 7.7E-05 41.8 8.3 80 29-115 617-706 (731)
12 2qsv_A Uncharacterized protein 85.3 3.4 0.00012 33.5 7.9 80 27-118 116-202 (220)
13 2q3z_A Transglutaminase 2; tra 84.9 1.5 5.1E-05 42.7 6.4 81 29-115 574-665 (687)
14 3isy_A Bsupi, intracellular pr 84.9 5.1 0.00018 30.7 8.3 69 44-115 16-98 (120)
15 1yew_A Particulate methane mon 82.8 3.5 0.00012 37.6 7.5 74 29-105 247-335 (382)
16 4fxk_B Complement C4-A alpha c 82.4 2.9 0.0001 39.7 7.3 73 39-116 161-234 (767)
17 1g0d_A Protein-glutamine gamma 81.4 2.9 9.8E-05 40.8 6.8 80 29-115 572-662 (695)
18 4acq_A Alpha-2-macroglobulin; 81.0 5.2 0.00018 41.5 9.0 78 39-120 776-853 (1451)
19 3es6_B Prolactin-inducible pro 78.7 13 0.00043 28.2 8.4 71 42-121 18-89 (118)
20 3prx_B Cobra venom factor; imm 78.1 8.4 0.00029 40.6 9.5 73 39-116 821-896 (1642)
21 3c75_A Amicyanin; copper prote 77.4 4.6 0.00016 30.4 5.6 20 91-114 98-117 (132)
22 2hr0_B Complement C3 alpha' ch 75.8 12 0.00041 36.6 9.4 85 30-118 74-166 (915)
23 2b39_A C3; thioester, immune d 74.4 14 0.00047 38.6 9.9 77 39-119 835-914 (1661)
24 1iuz_A Plastocyanin; electron 71.8 8.5 0.00029 26.8 5.5 51 56-114 31-81 (98)
25 4hci_A Cupredoxin 1; structura 71.7 6.4 0.00022 27.6 4.9 22 91-114 62-83 (100)
26 3cfu_A Uncharacterized lipopro 70.8 24 0.00083 27.6 8.5 63 43-107 43-114 (159)
27 2x41_A Beta-glucosidase; hydro 65.5 11 0.00039 36.2 6.5 84 47-136 615-703 (721)
28 2iaa_C Azurin; quinoprotein, t 64.8 7.5 0.00026 29.5 4.3 64 50-114 27-109 (128)
29 2pn5_A TEP1R, thioester-contai 63.8 23 0.00078 35.8 8.7 83 30-116 659-751 (1325)
30 2cal_A Rusticyanin; iron respi 63.0 22 0.00074 27.4 6.7 62 50-114 70-135 (154)
31 3qbt_B Inositol polyphosphate 61.7 25 0.00085 26.8 6.7 71 28-105 24-99 (140)
32 1id2_A Amicyanin; beta barrel, 60.3 17 0.00058 25.9 5.3 45 56-114 47-91 (106)
33 2aan_A Auracyanin A; cupredoxi 57.8 22 0.00076 26.2 5.7 58 49-114 43-121 (139)
34 3ay2_A Lipid modified azurin p 54.4 9.9 0.00034 30.4 3.4 64 50-114 68-148 (167)
35 4a02_A EFCBM33A, CBM33, chitin 52.4 59 0.002 26.0 7.7 63 48-113 75-143 (166)
36 3zyz_A Beta-D-glucoside glucoh 52.2 48 0.0017 31.9 8.4 85 47-136 613-702 (713)
37 3ugu_A S-arrestin; arrestin fo 52.1 50 0.0017 29.9 8.0 68 37-109 219-295 (380)
38 1iby_A Nitrosocyanin; RED copp 51.5 49 0.0017 23.2 6.5 23 91-115 72-94 (112)
39 2ccw_A Azurin II, AZN-2; elect 48.7 13 0.00046 28.0 3.2 22 50-71 28-53 (129)
40 3erx_A Pseudoazurin; copper pr 48.4 28 0.00095 26.0 4.9 35 63-113 39-75 (123)
41 2plt_A Plastocyanin; electron 46.4 30 0.001 23.6 4.5 52 55-114 30-81 (98)
42 1nwp_A Azurin; electron transp 45.3 29 0.001 26.2 4.6 54 50-104 28-99 (128)
43 3ef4_A Pseudoazurin, blue copp 45.2 31 0.0011 26.0 4.8 50 54-126 33-82 (124)
44 3tu6_A Pseudoazurin (blue copp 43.0 33 0.0011 25.8 4.6 41 55-113 35-77 (127)
45 1b3i_A PETE protein, protein ( 40.7 23 0.00079 24.1 3.2 51 54-114 30-80 (97)
46 1pcs_A Plastocyanin; electron 39.7 39 0.0013 23.0 4.2 50 56-114 32-81 (98)
47 2qsv_A Uncharacterized protein 38.4 1.4E+02 0.0046 23.8 8.0 65 40-114 13-80 (220)
48 1bw3_A Barwin, basic barley SE 37.4 40 0.0014 26.0 4.3 51 39-94 58-123 (125)
49 3cu7_A Complement C5; Mg domai 36.6 29 0.00098 36.2 4.4 83 30-117 816-913 (1676)
50 2ux6_A Pseudoazurin; type-1 co 35.9 80 0.0027 23.2 5.7 43 54-114 32-76 (122)
51 1cuo_A Protein (azurin ISO-2); 34.8 49 0.0017 24.9 4.4 64 50-114 28-110 (129)
52 1z9l_A Vesicle-associated memb 34.8 88 0.003 23.0 5.8 52 47-107 27-79 (128)
53 3q48_A Chaperone CUPB2; IG fol 34.5 1.9E+02 0.0066 24.1 8.6 18 47-64 42-59 (257)
54 3uam_A Chitin binding domain; 34.2 65 0.0022 26.9 5.4 68 44-113 110-193 (216)
55 1plc_A Plastocyanin; electron 33.9 60 0.0021 22.1 4.5 54 54-114 28-82 (99)
56 3a0j_A Cold shock protein; OB- 33.0 69 0.0024 21.7 4.6 44 26-71 21-70 (73)
57 2ov0_A Amicyanin; beta-sandwic 32.7 75 0.0026 22.2 4.9 20 91-114 71-90 (105)
58 2l9d_A Uncharacterized protein 32.2 12 0.0004 28.6 0.5 26 134-159 7-35 (108)
59 1w8o_A Bacterial sialidase; 3D 31.7 1.7E+02 0.0057 26.2 8.1 66 42-115 369-437 (601)
60 1pmy_A Pseudoazurin; electron 30.8 76 0.0026 23.4 4.9 42 54-113 32-75 (123)
61 2gim_A Plastocyanin; beta shee 30.5 37 0.0013 23.4 2.9 52 56-114 33-88 (106)
62 1xf1_A C5A peptidase, SCP; hyd 29.5 1.1E+02 0.0038 30.1 7.0 61 47-107 499-565 (926)
63 1byp_A Protein (plastocyanin); 29.0 38 0.0013 23.1 2.7 54 55-114 29-82 (99)
64 3rgh_A Filamin-A; cell adhesio 28.8 1.1E+02 0.0038 21.4 5.3 65 41-122 20-84 (100)
65 1wic_A Hypothetical protein ri 28.7 1.5E+02 0.0051 22.7 6.4 55 44-107 32-87 (152)
66 1paz_A Pseudoazurin precursor; 28.6 98 0.0033 22.8 5.2 42 54-113 32-75 (123)
67 3abz_A Beta-glucosidase I; gly 27.9 1.2E+02 0.0039 30.0 6.8 84 47-136 735-826 (845)
68 2cri_A Vesicle-associated memb 26.1 1.2E+02 0.004 23.0 5.3 52 47-107 31-83 (147)
69 3gld_A Pilin; all-beta, cell a 24.9 2.8E+02 0.0095 24.0 8.0 66 30-99 161-242 (295)
70 1g4m_A Beta-arrestin1; sensory 23.5 3.5E+02 0.012 23.9 8.7 77 27-109 194-279 (393)
71 2b3r_A Phosphatidylinositol-4- 22.9 63 0.0021 23.3 3.1 47 61-110 87-134 (134)
72 2dia_A Filamin-B; beta-sandwic 22.6 1.8E+02 0.0063 20.6 5.6 61 40-114 22-82 (113)
73 1suj_A CONE arrestin; sensory 22.2 4.3E+02 0.015 23.7 9.1 77 31-109 194-276 (392)
74 3cu7_A Complement C5; Mg domai 21.9 1.5E+02 0.0051 31.0 6.6 77 47-123 1398-1498(1676)
75 3pdd_A Glycoside hydrolase, fa 21.6 2.5E+02 0.0086 21.9 6.7 78 47-136 17-99 (190)
76 1row_A SSP-19, MSP-domain prot 21.6 2.4E+02 0.0081 20.5 6.1 48 50-106 18-66 (109)
77 3rdl_A Protein kinase C alpha 21.3 20 0.00068 25.5 -0.0 60 51-114 72-132 (137)
78 1rlw_A Phospholipase A2, CALB 20.7 1.7E+02 0.0058 20.1 5.0 61 51-115 60-120 (126)
79 3vta_A Cucumisin; subtilisin-l 20.3 4.9E+02 0.017 24.0 9.3 69 47-123 537-606 (621)
No 1
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=97.72 E-value=0.00039 Score=54.18 Aligned_cols=86 Identities=10% Similarity=0.115 Sum_probs=62.9
Q ss_pred hcccCCCceEEEEeecccccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCce-eeEEEEecCCCceEE
Q 029361 22 SFASSDVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNI-SQSWERLDAGGILSH 100 (194)
Q Consensus 22 ~~~~~~~a~LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~-s~~~erI~pg~nvsH 100 (194)
.++....|-|.++. .....+..| +.++++.++-|.|+.+|.+.++.- .+.|.. ....-.|+||++.+-
T Consensus 10 ~~~~~~~pDL~V~i-s~P~~v~~G-~~~ti~vtV~N~G~~~a~~~~V~l---------yvng~~v~t~~v~La~G~s~tv 78 (127)
T 3idu_A 10 LATTFEFPDLTVEI-KGPDVVGVN-KLAEYEVHVKNLGGIGVPSTKVRV---------YINGTLYKNWTVSLGPKEEKVL 78 (127)
T ss_dssp C--CCSSCCEEEEE-ESCSEECTT-CCEEEEEEEEECSSSCEEEEEEEE---------EETTEEEEEEEEEECTTCEEEE
T ss_pred EeeeccCCCeEEEe-cCCCcccCC-CEEEEEEEEEECCCCccCCcEEEE---------EECCEEEeeEEeccCCCCeEEE
Confidence 34556778899955 467788889 999999999999998765555542 223443 111225999999999
Q ss_pred EEEEEecceeeEeeecEE
Q 029361 101 SFELDAKVKGMFHGSPAL 118 (194)
Q Consensus 101 ~vvv~Pk~~G~fn~t~A~ 118 (194)
.|...|...|.|++.+-+
T Consensus 79 ~f~~~~~~~G~~~v~AvV 96 (127)
T 3idu_A 79 TFNWTPTQEGMYRINATV 96 (127)
T ss_dssp EEEECCSSCEEEEEEEEE
T ss_pred EEEEEcCCCcEEEEEEEE
Confidence 999999999999887543
No 2
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.67 E-value=0.016 Score=44.34 Aligned_cols=77 Identities=18% Similarity=0.253 Sum_probs=57.9
Q ss_pred ceEEEEeecccccccccceeEEEEEEEEecCCc--ceeeeEEecCCCCCCCeeeecCce--eeEEEEecCCCceEEEEEE
Q 029361 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTS--TAYDVSLTDDSWPQDKFDVISGNI--SQSWERLDAGGILSHSFEL 104 (194)
Q Consensus 29 a~LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s--~A~dV~L~D~sfp~e~Felv~G~~--s~~~erI~pg~nvsH~vvv 104 (194)
|-|.+.- +....+++| ..++|+.+|-|+|.. ++..|.|.. .|.. ......|++|++.+-.|..
T Consensus 3 PDL~vt~-itP~~~~~~-~~~ti~atVkN~G~~~a~~~~V~ly~-----------~g~~v~t~~v~~LaaG~s~tv~~~w 69 (114)
T 2l0d_A 3 PDLVPVS-LTPVTVVPN-TVNTMTATIENQGNKDSTSFNVSLLV-----------DGIVVDTQTVTSLESENSTNVDFHW 69 (114)
T ss_dssp CCEEEEE-EECSEECTT-SEEEEEEEEEECSSSCBCCEEEEEEE-----------TTEEEEEEEESCBCBTCEEEEEEEE
T ss_pred CCcEEEe-ccCCCcCCC-CeEEEEEEEEECCCCCCCCEEEEEEE-----------CCEEEcceecccccCCCEEEEEEEE
Confidence 4465554 345568999 999999999999987 455566553 3443 3456679999999999999
Q ss_pred Eec-ceeeEeeecEE
Q 029361 105 DAK-VKGMFHGSPAL 118 (194)
Q Consensus 105 ~Pk-~~G~fn~t~A~ 118 (194)
.|+ ..|.|.++..+
T Consensus 70 ~~~~~~G~ytl~a~V 84 (114)
T 2l0d_A 70 TLDGTANSYTLTVNV 84 (114)
T ss_dssp ECCCSCSEEEEEEEE
T ss_pred eecCcCceEEEEEEE
Confidence 998 58999987643
No 3
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=94.63 E-value=0.064 Score=40.06 Aligned_cols=68 Identities=12% Similarity=0.006 Sum_probs=55.9
Q ss_pred cccccccceeEEEEEEEEecCCcceeeeEEe-cCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLT-DDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~-D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
...+++| ++++++.++.|-=.-+-.|..++ +- =-+..+ .......|+||+.+++.+.++|++.|.-.+
T Consensus 13 ~g~~~v~-~~l~v~vsf~NPL~~~L~~c~~~vEG------~GL~~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~~L 81 (102)
T 2xzz_A 13 LGAAVVG-QECEVQIVFKNPLPVTLTNVVFRLEG------SGLQRP-KILNVGDIGGNETVTLRQSFVPVRPGPRQL 81 (102)
T ss_dssp SSCCCSS-SCEEEEEEEECCSSSCBCSEEEEEEE------TTTEEE-EEEEECCBCTTCEEEEEEEECCCSCSSCCC
T ss_pred CCCcccC-CeEEEEEEEECCCCCcccCEEEEEEC------CCCCcc-eEEEcCcCCCCCEEEEEEEEecCcccceEE
Confidence 5677889 99999999999988888888776 31 115555 677888999999999999999999998554
No 4
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=94.24 E-value=0.3 Score=41.12 Aligned_cols=75 Identities=12% Similarity=-0.005 Sum_probs=54.1
Q ss_pred cccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecC--ceeeEEEEecCCCceEEEEEEEecceeeEeeec
Q 029361 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG--NISQSWERLDAGGILSHSFELDAKVKGMFHGSP 116 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G--~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~ 116 (194)
...++.| +.+.+..++||..+.. .+|++.=. ..+.|..... ....+--.|++|+..+..+.|+|++.|..+++-
T Consensus 89 P~sv~rG-E~~~l~~~V~Ny~~~~-~~v~V~l~--~~~~~~~~~~~~~~~~~~v~v~a~~~~~v~f~i~p~~~G~~~i~v 164 (252)
T 3hrz_B 89 PYSVVKN-EQVEIRAILHNYVNED-IYVRVELL--YNPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVEI 164 (252)
T ss_dssp CSCEETT-CCEEEEEEEEECSSSC-EEEEEEEC--CCTTEEESCCSSCCEEEEEEECTTEEEEEEEEEEECSSEEEEEEE
T ss_pred CcEEeeC-CEEEEEEEEEcccCce-EEEEEEEE--cCCceEeecCCCCceEEEEEECCCCeEEEEEEEEeccCCcEEEEE
Confidence 4455677 9999999999998854 44444321 2345766542 223455679999999999999999999887764
Q ss_pred E
Q 029361 117 A 117 (194)
Q Consensus 117 A 117 (194)
.
T Consensus 165 ~ 165 (252)
T 3hrz_B 165 K 165 (252)
T ss_dssp E
T ss_pred E
Confidence 3
No 5
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=93.65 E-value=0.079 Score=47.17 Aligned_cols=58 Identities=21% Similarity=0.255 Sum_probs=43.9
Q ss_pred eeEEEEEEEEecCCcceeeeE--EecCCCCCCCeeeecCce---------------eeEEEEecCCCceEEEEEEE
Q 029361 47 ERISVSIDIHNQGTSTAYDVS--LTDDSWPQDKFDVISGNI---------------SQSWERLDAGGILSHSFELD 105 (194)
Q Consensus 47 ~ditV~ytIYNvG~s~A~dV~--L~D~sfp~e~Felv~G~~---------------s~~~erI~pg~nvsH~vvv~ 105 (194)
.++.|+.+|.|.|+.+..=++ +- |++|.+.|+|-.+.. ...+-.|+||+++++++-|-
T Consensus 36 ~~~~vk~tvtN~g~~~~~lLk~~~l-D~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 36 DDVRVNLTLTNTGDKPIRLLKWQLP-GSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVS 110 (343)
T ss_dssp SCCEEEEEEEECSSSCEEEEGGGSC-SSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECT
T ss_pred CCeEEEEEEEeCCCCceEeeccCCC-CcCccceEEEEeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehh
Confidence 789999999999998743222 23 468889999865421 13588999999999999984
No 6
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=93.45 E-value=0.11 Score=40.34 Aligned_cols=72 Identities=19% Similarity=0.220 Sum_probs=51.2
Q ss_pred cccccccceeEEEEEEEEecCCc--ceeeeEEecCCCCCCCeeeecCce--eeEEEEecCCCceEEEEEEE--ecce---
Q 029361 39 LKRLKSGAERISVSIDIHNQGTS--TAYDVSLTDDSWPQDKFDVISGNI--SQSWERLDAGGILSHSFELD--AKVK--- 109 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s--~A~dV~L~D~sfp~e~Felv~G~~--s~~~erI~pg~nvsH~vvv~--Pk~~--- 109 (194)
...+++| ..++|+.+|-|+|.. +|..|.+.-++ |.. +|.+ +.....|+||++.+-.+.+. ++..
T Consensus 9 P~~p~~g-~~vTvsatVkN~Gt~~s~a~~V~~yl~~-p~~-----gg~~vgt~tv~~LaaG~s~t~~v~~~~~~~~~~~a 81 (122)
T 2kut_A 9 KETPFEG-EEITVSARVTNRGAAEAHNVPVAVYLGN-PAQ-----GGVEIGRDTISRIPVGGTGLARVQWKATRKLAGRA 81 (122)
T ss_dssp TTSCCTT-CEEEEEEEEECCSSSCBCCCCEEECSSC-TTT-----CCCCCBCCCCSCBCTTCEEECCEEEECCCCCSSCC
T ss_pred CCCCCCC-CeEEEEEEEEeCCCcccCcEEEEEEeCC-Ccc-----CCeEEeeEEccccCCCCeEEEEEEEecCCcccccc
Confidence 4567889 999999999999988 67778877654 321 2232 33457899999999555544 4443
Q ss_pred --eeEeeecE
Q 029361 110 --GMFHGSPA 117 (194)
Q Consensus 110 --G~fn~t~A 117 (194)
|.|.+.+.
T Consensus 82 ~~Gsy~v~Av 91 (122)
T 2kut_A 82 ANPGVPVYAV 91 (122)
T ss_dssp SCCCCCCCEE
T ss_pred cCceEEEEEE
Confidence 88887653
No 7
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=90.24 E-value=0.77 Score=44.71 Aligned_cols=79 Identities=14% Similarity=0.133 Sum_probs=63.8
Q ss_pred EEEEeeccccc----------ccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEE
Q 029361 31 IVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSH 100 (194)
Q Consensus 31 LlvsK~i~~~~----------~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH 100 (194)
+++.|.+.... +++| +++++++++.|-=..+-.|..|+=+ .=-|..|..+.....|+||+.+++
T Consensus 583 ~~~~~di~l~~P~l~I~v~g~~~v~-~~l~v~v~f~NPL~~~L~~c~~~vE-----G~GL~~~~~~~~~~~v~pg~~~~~ 656 (692)
T 1vjj_A 583 VVVERDIILDNPTLTLEVLNEARVR-KPVNVQMLFSNPLDEPVRDCVLMVE-----GSGLLLGNLKIDVPTLGPKERSRV 656 (692)
T ss_dssp EEEEEEEECBCCCEEEEECSCCBTT-SCEEEEEEEECCSSSCBCSEEEEEE-----CTTTSSSCEEEEECCBCTTCEEEE
T ss_pred EEEEEEEEEcCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEE-----CCCCCCCceEEEcCccCCCCEEEE
Confidence 77888775554 5788 9999999999998888888877621 112566677888899999999999
Q ss_pred EEEEEecceeeEeee
Q 029361 101 SFELDAKVKGMFHGS 115 (194)
Q Consensus 101 ~vvv~Pk~~G~fn~t 115 (194)
.+.++|++.|.-.+.
T Consensus 657 ~~~~~P~~~G~r~L~ 671 (692)
T 1vjj_A 657 RFDILPSRSGTKQLL 671 (692)
T ss_dssp EEEECCCSCEEEEEE
T ss_pred EEEEEeccccceEEE
Confidence 999999999997764
No 8
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.10 E-value=0.81 Score=32.71 Aligned_cols=81 Identities=15% Similarity=0.126 Sum_probs=53.0
Q ss_pred CceEEEEeecccc-cccccceeEEEEEEEEecCCcceeeeEEecCCC-CCCCeeeecCceeeEEEEecCCCceEEEEEEE
Q 029361 28 VPFIVAHKKASLK-RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSW-PQDKFDVISGNISQSWERLDAGGILSHSFELD 105 (194)
Q Consensus 28 ~a~LlvsK~i~~~-~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sf-p~e~Felv~G~~s~~~erI~pg~nvsH~vvv~ 105 (194)
+|.+-+++...+= ....| ...+-+++|.|.|+.++. .++.++.= ....|.+ +-.-..|+||+..+-.++..
T Consensus 7 ~P~i~~~~~~ldFG~v~~g-~~~~~~~~l~N~g~~p~~-~~~~~~~~~~~~~f~v-----~p~~g~i~pg~~~~i~V~f~ 79 (112)
T 2e6j_A 7 GPKIHFNFELLDIGKVFTG-SAHCYEAILYNKGSIDAL-FNMTPPTSALGACFVF-----SPKEGIIEPSGVQAIQISFS 79 (112)
T ss_dssp CCSEEESCSEEEEEEEESS-CCEEEEEEEEECCSSCEE-EEECCCSSHHHHHCEE-----ESSEEEECTTBCCEEEEEEC
T ss_pred CCEEEECcccEecEeEEEC-CEEEEEEEEEECCcceEE-EEEecCCccccCcEEE-----ECCcCEECCCCEEEEEEEEE
Confidence 4555565544333 34456 889999999999997654 33322110 0011322 23446899999999999999
Q ss_pred ecceeeEeee
Q 029361 106 AKVKGMFHGS 115 (194)
Q Consensus 106 Pk~~G~fn~t 115 (194)
|+..|.|+-+
T Consensus 80 ~~~~g~f~~~ 89 (112)
T 2e6j_A 80 SIILGNFEEE 89 (112)
T ss_dssp CCCCEEEEEE
T ss_pred CCCcceEEEE
Confidence 9999999865
No 9
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.73 E-value=1.6 Score=32.24 Aligned_cols=83 Identities=12% Similarity=0.188 Sum_probs=62.2
Q ss_pred CCceEEEEeecccccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEe
Q 029361 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDA 106 (194)
Q Consensus 27 ~~a~LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~P 106 (194)
..+.|-+...+.-.....| ..-+-++.|-|.|+.++. .++.. +..|.+-- .-..|+||+..+-++.-.|
T Consensus 22 ~~~~l~~p~~l~fg~~~v~-~~~~~~~~l~N~g~~~~~-f~~~~----~~~F~i~P-----~~g~L~pg~~~~i~V~F~P 90 (122)
T 2ys4_A 22 ARAILDFPDKLNFSTCPVK-YSTQKILLVRNIGNKNAV-FHIKT----CRPFSIEP-----AIGTLNVGESMQLEVEFEP 90 (122)
T ss_dssp CCCCCCCCSEECCCSEESS-SCEEEEEEEECCSSSCEE-EEEEC----CTTEEEES-----SEEEECTTCEEEEEEEECC
T ss_pred CCcEECCCCeeecCCeecC-CeEEEEEEEEECCCCCEE-EEEec----CCCeEEEC-----CcCEECCCCEEEEEEEEEc
Confidence 3344555566777777888 999999999999997663 34332 34686632 2388999999999999999
Q ss_pred cceeeEeeecEEEEE
Q 029361 107 KVKGMFHGSPALITF 121 (194)
Q Consensus 107 k~~G~fn~t~A~VtY 121 (194)
+..|.|+..- .+.|
T Consensus 91 ~~~g~~~~~l-~v~~ 104 (122)
T 2ys4_A 91 QSVGDHSGRL-IVCY 104 (122)
T ss_dssp SSSBCCCCBC-EEEE
T ss_pred CCCccEEEEE-EEEE
Confidence 9999998765 5556
No 10
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=86.78 E-value=1.5 Score=40.29 Aligned_cols=73 Identities=8% Similarity=0.087 Sum_probs=55.0
Q ss_pred EEEEeecccccccccceeEEEEEEEEecCCccee-------eeEEecCCC------CCCCeeeecCceeeEEEEecCCCc
Q 029361 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY-------DVSLTDDSW------PQDKFDVISGNISQSWERLDAGGI 97 (194)
Q Consensus 31 LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s~A~-------dV~L~D~sf------p~e~Felv~G~~s~~~erI~pg~n 97 (194)
-+.-|-..-+|-|.| +.++++++|-|.|+++.. +|.+.|++. .++....-.|..+-. -|+||++
T Consensus 283 ~V~~~v~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~--pI~PGET 359 (419)
T 3rfr_A 283 QVTTELNGGVYKVPG-RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD--VIAPGES 359 (419)
T ss_dssp CCEEEEEEEEEESSS-SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC--CBCTTCE
T ss_pred ceEEEEeceEEecCC-cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC--CcCCCcc
Confidence 355566667899999 999999999999999865 677776544 344554455644333 8999999
Q ss_pred eEEEEEEEe
Q 029361 98 LSHSFELDA 106 (194)
Q Consensus 98 vsH~vvv~P 106 (194)
.+-++.+.-
T Consensus 360 rt~~V~a~d 368 (419)
T 3rfr_A 360 KEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEeeh
Confidence 999988773
No 11
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=86.02 E-value=2.2 Score=41.77 Aligned_cols=80 Identities=14% Similarity=0.102 Sum_probs=63.4
Q ss_pred ceEEEEeeccccc----------ccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCce
Q 029361 29 PFIVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGIL 98 (194)
Q Consensus 29 a~LlvsK~i~~~~----------~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nv 98 (194)
-.+++.|.+.... +++| +++++++++.|-=..+-.|..|+=+ .=-|..+ .......|+||+.+
T Consensus 617 ~~~~~~~di~l~~P~l~I~v~g~~~v~-~~l~v~vsf~NPL~~~L~~c~~~vE-----G~GL~~~-~~~~~~~v~pg~~~ 689 (731)
T 1ex0_A 617 DVLAKQKSTVLTIPEIIIKVRGTQVVG-SDMTVTVQFTNPLKETLRNVWVHLD-----GPGVTRP-MKKMFREIRPNSTV 689 (731)
T ss_dssp CEEEEEEEEECBCCCCEEEEEECCBTT-SCEEEEEEEECCSSSCEEEEEEEEE-----ETTTEEE-EEEEEEEECTTCEE
T ss_pred eEEEEEEEEEEeCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEE-----CCCCCce-eeEecCccCCCCEE
Confidence 3477777775544 5788 9999999999998888888877621 0115555 67888999999999
Q ss_pred EEEEEEEecceeeEeee
Q 029361 99 SHSFELDAKVKGMFHGS 115 (194)
Q Consensus 99 sH~vvv~Pk~~G~fn~t 115 (194)
++.+.++|++.|.-.+.
T Consensus 690 ~~~~~~~P~~~G~r~L~ 706 (731)
T 1ex0_A 690 QWEEVCRPWVSGHRKLI 706 (731)
T ss_dssp EEEEEECCSSCEEEEEE
T ss_pred EEEEEEEeccccceEEE
Confidence 99999999999997764
No 12
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=85.28 E-value=3.4 Score=33.54 Aligned_cols=80 Identities=14% Similarity=0.154 Sum_probs=54.8
Q ss_pred CCceEEEEeecccccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEE--EEecCCCceEEEEEE
Q 029361 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW--ERLDAGGILSHSFEL 104 (194)
Q Consensus 27 ~~a~LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~--erI~pg~nvsH~vvv 104 (194)
..|.+-++ ...+=.-+.| +..+.+++|.|.|+++ +.|.|- .---|-+...| +.|+||++.+-.++.
T Consensus 116 ~~~~i~~~-~~~dfG~i~g-~~~~~~f~i~N~G~~p---L~I~~v-------~~scgct~~~~~~~~i~PGe~~~i~v~~ 183 (220)
T 2qsv_A 116 QTGVMELS-TYLDMGQLDG-ETTKAAIEIRNVGAGP---LRLHSV-------TTRNPALTAVPDRTEIKPGGSTLLRIAV 183 (220)
T ss_dssp GCCCEECC-CEEEEEECTT-SCEEEEEEEEECSSSC---EEEEEE-------EECSTTEEEEESCSEECTTCEEEEEEEE
T ss_pred cCCEEEEE-eEEeeeccCC-CeEEEEEEEEECCCCC---EEEEEE-------EeCCCCEeeecCCccCCCCCEEEEEEEE
Confidence 45667666 4434444555 9999999999999985 334332 12234454444 579999999999999
Q ss_pred Eecce-ee----EeeecEE
Q 029361 105 DAKVK-GM----FHGSPAL 118 (194)
Q Consensus 105 ~Pk~~-G~----fn~t~A~ 118 (194)
.|+.. |. |+-+-.+
T Consensus 184 ~~~~~~g~~~~~~~~~i~v 202 (220)
T 2qsv_A 184 DPQVMKAEGWQSIAADISI 202 (220)
T ss_dssp CHHHHHHTTCSEEEEEEEE
T ss_pred ecCCCCCcccceeccEEEE
Confidence 99988 88 7765444
No 13
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=84.88 E-value=1.5 Score=42.68 Aligned_cols=81 Identities=11% Similarity=0.178 Sum_probs=63.2
Q ss_pred ceEEEEeeccccc----------ccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEE-EEecCCCc
Q 029361 29 PFIVAHKKASLKR----------LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW-ERLDAGGI 97 (194)
Q Consensus 29 a~LlvsK~i~~~~----------~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~-erI~pg~n 97 (194)
-.+++.|.+.... +++| +++++++++.|-=..+-.|..|+=+ .=-|..++...+. ..|+||+.
T Consensus 574 ~~~~~~~di~l~~P~l~I~v~g~~~v~-~~~~v~v~f~NPL~~~L~~c~~~vE-----G~GL~~~~~~~~~~~~v~pg~~ 647 (687)
T 2q3z_A 574 SYLLAERDLYLENPEIKIRILGEPKQK-RKLVAEVSLQNPLPVALEGCTFTVE-----GAGLTEEQKTVEIPDPVEAGEE 647 (687)
T ss_dssp EEEEEEEEEECBCCCCEEEEESCCSSS-SCEEEEEEEECCSSSCBCSEEEEEE-----CTTTCSSCEEEEECSCBCTTCE
T ss_pred eEEEEEEEEEEeCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEE-----CCCCCCCceEEecCCCcCCCCE
Confidence 3477777765554 4678 9999999999998888888877621 1125666677888 78999999
Q ss_pred eEEEEEEEecceeeEeee
Q 029361 98 LSHSFELDAKVKGMFHGS 115 (194)
Q Consensus 98 vsH~vvv~Pk~~G~fn~t 115 (194)
+++.+.++|++.|.-.+.
T Consensus 648 ~~~~~~~~P~~~G~~~L~ 665 (687)
T 2q3z_A 648 VKVRMDLVPLHMGLHKLV 665 (687)
T ss_dssp EEEEEEECCCSSSCEEEE
T ss_pred EEEEEEEEeccccceEEE
Confidence 999999999999987753
No 14
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=84.85 E-value=5.1 Score=30.69 Aligned_cols=69 Identities=13% Similarity=0.268 Sum_probs=46.0
Q ss_pred ccceeEEEEEEEEecCCcce---------eeeEEec-CCCCCCCeeeecCce---eeEEEEecCCCceEEEEEEE-ecce
Q 029361 44 SGAERISVSIDIHNQGTSTA---------YDVSLTD-DSWPQDKFDVISGNI---SQSWERLDAGGILSHSFELD-AKVK 109 (194)
Q Consensus 44 ~g~~ditV~ytIYNvG~s~A---------~dV~L~D-~sfp~e~Felv~G~~---s~~~erI~pg~nvsH~vvv~-Pk~~ 109 (194)
.| ..+.+.++|-|.|+.+- +|+.|.| ++ .+.|.--.|.+ -..-..|+||+..+...+.- +...
T Consensus 16 ~g-~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G--~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~p 92 (120)
T 3isy_A 16 EP-EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEH--KERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEP 92 (120)
T ss_dssp CS-SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTC--CEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCS
T ss_pred CC-CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCC--CEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCC
Confidence 56 79999999999998542 3555554 21 22222222221 23457899999999999999 5678
Q ss_pred eeEeee
Q 029361 110 GMFHGS 115 (194)
Q Consensus 110 G~fn~t 115 (194)
|.|...
T Consensus 93 G~Ytl~ 98 (120)
T 3isy_A 93 GTYEVK 98 (120)
T ss_dssp EEEEEE
T ss_pred ccEEEE
Confidence 888754
No 15
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=82.79 E-value=3.5 Score=37.56 Aligned_cols=74 Identities=20% Similarity=0.281 Sum_probs=54.4
Q ss_pred ceEEEEeecccccccccceeEEEEEEEEecCCccee-------eeEEecCC-------CCCCCeeeecCceeeEEEE-ec
Q 029361 29 PFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAY-------DVSLTDDS-------WPQDKFDVISGNISQSWER-LD 93 (194)
Q Consensus 29 a~LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s~A~-------dV~L~D~s-------fp~e~Felv~G~~s~~~er-I~ 93 (194)
+..+.-|-..-+|-|.| +.++++.+|-|.|+++.. +|.+.|++ +|++ . +-.+-++++=+. |+
T Consensus 247 ~~~V~~~v~~A~Y~vpg-R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~-l-la~~gL~vsd~~pI~ 323 (382)
T 1yew_A 247 APTVSVKVEDATYRVPG-RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPED-L-LAEDGLSVSDNSPLA 323 (382)
T ss_dssp CCSEEEEEEEEEEESSC-SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGG-G-EETTCEEESCCSCBC
T ss_pred CCceEEEeeccEEecCC-cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHH-h-hccCCceeCCCCCcC
Confidence 34566777778999999 999999999999999875 66675533 3332 1 334345655555 99
Q ss_pred CCCceEEEEEEE
Q 029361 94 AGGILSHSFELD 105 (194)
Q Consensus 94 pg~nvsH~vvv~ 105 (194)
||++.+-++.+.
T Consensus 324 PGETr~~~v~a~ 335 (382)
T 1yew_A 324 PGETRTVDVTAS 335 (382)
T ss_dssp TTCEEEEEEEEE
T ss_pred CCceeEEEEEee
Confidence 999999988876
No 16
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=82.43 E-value=2.9 Score=39.72 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=52.2
Q ss_pred cccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCc-eeeEEEEecCCCceEEEEEEEecceeeEeeec
Q 029361 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-ISQSWERLDAGGILSHSFELDAKVKGMFHGSP 116 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~-~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~ 116 (194)
...++.| +.+++..+|+|..+. ...|++.=. +.+.|.+..+. ...++ .|+||+..+..|.|+|++.|..+++.
T Consensus 161 P~~v~~G-D~~~i~~~V~N~~~~-~~~v~v~l~--~~~~~~~~~~~~~~~~~-~v~a~~~~~v~f~i~~~~~G~~~i~v 234 (767)
T 4fxk_B 161 PMSVRRF-EQLELRPVLYNYLDK-NLTVSVHVS--PVEGLCLAGGGGLAQQV-LVPAGSARPVAFSVVPTAAAAVSLKV 234 (767)
T ss_dssp CSCEETT-CEEEECCEEEECSSS-CEEEEEEEC--CCTTEECSSSSCCCEEE-EECSSCEEECCEEEEECSCSEEEEEE
T ss_pred CCeeccC-CEEEEEEEEEECCCC-CEEEEEEEE--ecCCeEEecCCceeEEE-EEcCCCeEEEEEEEEECccCcEEEEE
Confidence 4556777 999999999999875 344444321 33556555443 33444 59999999999999999999887754
No 17
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=81.43 E-value=2.9 Score=40.80 Aligned_cols=80 Identities=11% Similarity=0.037 Sum_probs=60.2
Q ss_pred ceEEEEeecccc----------cccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEE-EEecCCCc
Q 029361 29 PFIVAHKKASLK----------RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSW-ERLDAGGI 97 (194)
Q Consensus 29 a~LlvsK~i~~~----------~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~-erI~pg~n 97 (194)
-.+++.|.+... .+++| +++++++++.|-=..+-.|..|+=. .=-|..+ ..... ..|+||+.
T Consensus 572 ~~~~~~~di~l~~P~l~I~v~g~~~v~-~~l~a~vsf~NPL~~~L~~c~~~vE-----G~GL~~~-~~~~~~~~v~Pg~~ 644 (695)
T 1g0d_A 572 GPIMTVANIPLSTPELLVQVPGKAVVW-EPLTAYVSFTNPLPVPLKGGVFTLE-----GAGLLSA-TQIHVNGAVAPSGK 644 (695)
T ss_dssp -EEEEEEEEECBCCCCEEECCSCEETT-CCEEEEEEEECCSSSCEESCEEEEE-----ETTTEEE-EEEECSSEECTTCE
T ss_pred eEEEEEEEEEEcCCCEEEEeCCCcccC-CeEEEEEEEECCCCCcccceEEEEE-----CCCCCcc-eEEecCCCcCCCCE
Confidence 347777776444 45788 9999999999988877777776511 0114455 56777 78999999
Q ss_pred eEEEEEEEecceeeEeee
Q 029361 98 LSHSFELDAKVKGMFHGS 115 (194)
Q Consensus 98 vsH~vvv~Pk~~G~fn~t 115 (194)
+++.+.++|++.|.-.+.
T Consensus 645 ~~~~~~~~P~~~G~r~L~ 662 (695)
T 1g0d_A 645 VSVKLSFSPMRTGVRKLL 662 (695)
T ss_dssp EEEEEEECCSSCEEEEEE
T ss_pred EEEEEEEEcCCccceEEE
Confidence 999999999999997753
No 18
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=80.98 E-value=5.2 Score=41.47 Aligned_cols=78 Identities=15% Similarity=0.096 Sum_probs=55.7
Q ss_pred cccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEeeecEE
Q 029361 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPAL 118 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~A~ 118 (194)
...++.| +.+++..+|||..+. +.+|++.=. .++.|++..+.....=-.|++|+..+..+.|+|++.|..+++..-
T Consensus 776 P~sv~rG-E~~~l~~~V~N~~~~-~~~v~V~l~--~~~~~~~~~~~~~~~~v~l~~~~~~~v~f~v~p~~~G~~~i~v~a 851 (1451)
T 4acq_A 776 PYSVIRG-EAFTLKATVLNYLPK-CIRVSVQLE--ASPAFLAVPVEKEQAPHCICANGRQTVSWAVTPKSLGNVNFTVSA 851 (1451)
T ss_dssp CSEEESS-SCEEEEEEEEECSSS-CEEEEEEEC--CCTTEEEEESCSCCCCEEECTTEEEEEEEEEEECSCEEEEEEEEE
T ss_pred CceEecC-CEEEEEEEEEeccCc-cEEEEEEEE--cCCCeEeecCCCCceEEEECCCCeEEEEEEEEECccceEEEEEEE
Confidence 5566777 999999999999774 444444321 234688876532222235999999999999999999998877654
Q ss_pred EE
Q 029361 119 IT 120 (194)
Q Consensus 119 Vt 120 (194)
.+
T Consensus 852 ~~ 853 (1451)
T 4acq_A 852 EA 853 (1451)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 19
>3es6_B Prolactin-inducible protein; major histocompatibility complex, protein-protein complex, P inducible protein, zinc 2-glycoprotein, ZAG-PIP complex; HET: NDG NAG BMA MAN P6G; 3.23A {Homo sapiens} SCOP: b.1.18.23
Probab=78.71 E-value=13 Score=28.21 Aligned_cols=71 Identities=3% Similarity=0.007 Sum_probs=49.4
Q ss_pred ccccceeEEEEEEEEecCCc-ceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEeeecEEEE
Q 029361 42 LKSGAERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120 (194)
Q Consensus 42 ~v~g~~ditV~ytIYNvG~s-~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~A~Vt 120 (194)
.+.| +.++++-++||.=+. -...|.|.. ++.|+...+. ..=.-|.+|+..++.+.++|. |..||+..--.
T Consensus 18 v~rg-E~~~~~~~V~nyl~~~~~v~v~L~~----s~~~~~~~~~--~~t~Clc~~~~~t~~W~i~~l--g~vniTvsAea 88 (118)
T 3es6_B 18 VRPN-DEVTAVLAVQTELKECMVVKTYLIS----SIPLQGAFNY--KYTACLCDDNPKTFYWDFYTN--RTVQIAAVVDV 88 (118)
T ss_dssp ECSS-CCEEEEEEEEECCSSCEEEEEEEEE----SSCCCSGGGC--EEEEEECSSSCEEEEEEECCS--SCEEEEEEEEE
T ss_pred EecC-CEEEEEEEEEecccceEEEEEEecC----CcCEEccCCC--cccEEecCCCceEEEEEEEeC--CeEEEEEEEEE
Confidence 5566 999999999999876 455666654 3455544433 222359999999999999885 66666655444
Q ss_pred E
Q 029361 121 F 121 (194)
Q Consensus 121 Y 121 (194)
.
T Consensus 89 ~ 89 (118)
T 3es6_B 89 I 89 (118)
T ss_dssp C
T ss_pred e
Confidence 3
No 20
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=78.08 E-value=8.4 Score=40.64 Aligned_cols=73 Identities=14% Similarity=0.040 Sum_probs=52.6
Q ss_pred cccccccceeEEEEEEEEecCCcc-eeeeEEecCCCCCCCeeeecC--ceeeEEEEecCCCceEEEEEEEecceeeEeee
Q 029361 39 LKRLKSGAERISVSIDIHNQGTST-AYDVSLTDDSWPQDKFDVISG--NISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s~-A~dV~L~D~sfp~e~Felv~G--~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t 115 (194)
...++.| +.+++..+|||..+.+ -..|+|.. ++.|.+.+. .-..+--.|+||+..+..+.|+|++.|..+++
T Consensus 821 Pysv~rG-Eq~~l~v~VfNy~~~~~~V~V~L~~----s~~~~~~~~~~~~~~q~v~v~a~~~~~v~f~i~p~~~G~~~i~ 895 (1642)
T 3prx_B 821 PYSVVKN-EQVEIRAILHNYVNEDIYVRVELLY----NPAFCSASTKGQRYRQQFPIKALSSRAVPFVIVPLEQGLHDVE 895 (1642)
T ss_dssp CSCEETT-CCEEEEEEEEECSSSCEEEEEEECC----CTTEEESCCSSSCCEEEEEECSSEEEEEEEEEEECSCEEEEEE
T ss_pred CCEEecC-CEEEEEEEEEcCCCCcEEEEEEEEc----CCCeEeeccCCCcceeEEEECCCCeEEEEEEEEEeecccEEEE
Confidence 4455566 9999999999999864 23444443 346766542 11122348999999999999999999998876
Q ss_pred c
Q 029361 116 P 116 (194)
Q Consensus 116 ~ 116 (194)
.
T Consensus 896 v 896 (1642)
T 3prx_B 896 I 896 (1642)
T ss_dssp E
T ss_pred E
Confidence 5
No 21
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=77.37 E-value=4.6 Score=30.37 Aligned_cols=20 Identities=10% Similarity=0.195 Sum_probs=12.5
Q ss_pred EecCCCceEEEEEEEecceeeEee
Q 029361 91 RLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 91 rI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
.|+||+..+++| .+.|.|.|
T Consensus 98 ~l~pG~t~~~tF----~~~G~y~y 117 (132)
T 3c75_A 98 MMTKDQAYAITF----NEAGSYDY 117 (132)
T ss_dssp CBCTTEEEEEEE----CSCEEEEE
T ss_pred ccCCCCEEEEEc----CCCEEEEE
Confidence 467887777665 35565544
No 22
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=75.82 E-value=12 Score=36.56 Aligned_cols=85 Identities=9% Similarity=0.029 Sum_probs=57.5
Q ss_pred eEEEEeecc-----cccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecC---ceeeEEEEecCCCceEEE
Q 029361 30 FIVAHKKAS-----LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISG---NISQSWERLDAGGILSHS 101 (194)
Q Consensus 30 ~LlvsK~i~-----~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G---~~s~~~erI~pg~nvsH~ 101 (194)
.+.+.|-+- ...++.| +.+++..+|+|..+..+.+|++.=. .++.|.+.+. ....++ .|+||+..+..
T Consensus 74 ~~~v~kp~~v~~~LP~~v~~G-D~~~i~~~v~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v-~l~~~~~~~v~ 149 (915)
T 2hr0_B 74 EVTVMQDFFIDLRLPYSVVRN-EQVEIRAVLYNYRQNQELKVRVELL--HNPAFCSLATTKRRHQQTV-TIPPKSSLSVP 149 (915)
T ss_dssp EEEECCSSEEEEECCSEEETT-CCEEEEEEEEECCSSCCEEEEEEEC--CCTTEECSCCSSSCEEEEE-EECTTEEEEEE
T ss_pred eEEEeccEEEEccCCCEEecC-cEEEEEEEEEcCCCCeeEEEEEEEe--cCCceEeecCCCCcceeEE-EECCCCeEEEE
Confidence 566666432 3456677 9999999999998723455555422 2345665432 122333 68999999999
Q ss_pred EEEEecceeeEeeecEE
Q 029361 102 FELDAKVKGMFHGSPAL 118 (194)
Q Consensus 102 vvv~Pk~~G~fn~t~A~ 118 (194)
+.|+|...|..+++-.-
T Consensus 150 f~i~~~~~G~~~i~v~a 166 (915)
T 2hr0_B 150 YVIVPLKTGLQEVEVKA 166 (915)
T ss_dssp EEEEECSCEEEEEEEEE
T ss_pred EEEEECccceEEEEEEE
Confidence 99999999988876543
No 23
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=74.42 E-value=14 Score=38.56 Aligned_cols=77 Identities=9% Similarity=0.034 Sum_probs=53.8
Q ss_pred cccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCc---eeeEEEEecCCCceEEEEEEEecceeeEeee
Q 029361 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN---ISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~---~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t 115 (194)
...++.| +.+++..+|||..+..+.+|++.=. .++.|.+..+. ...++ .|++|+..+..+.|+|.+.|..+++
T Consensus 835 P~sv~~G-D~~~i~~~V~N~~~~~~~~v~v~l~--~~~~~~~~~~~~~~~~~~v-~v~a~~~~~v~f~i~p~~~G~~~i~ 910 (1661)
T 2b39_A 835 PYSVVRN-EQVEIRAILYNYREAENLKVRVELL--YNPAFCSLATAKKRHQQTI-TIPARSSVAVPYVIVPLKIGLHEVE 910 (1661)
T ss_dssp CSCEESS-CEEEEEEEEEECCTTCCEEEEEEEC--CCTTEECSSCSSCCCEEEE-EECTTCEEEEEEEEEECSCEEEEEE
T ss_pred CcEEEeC-CEEEEEEEEEcCCCCccEEEEEEEc--CCCCeEeecCCCCcceEEE-EECCCCcEEEEEEEEEcccCeEEEE
Confidence 4466777 9999999999998724455555422 23456655431 22333 6899999999999999999988876
Q ss_pred cEEE
Q 029361 116 PALI 119 (194)
Q Consensus 116 ~A~V 119 (194)
-.--
T Consensus 911 v~a~ 914 (1661)
T 2b39_A 911 VKAA 914 (1661)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 24
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=71.83 E-value=8.5 Score=26.79 Aligned_cols=51 Identities=16% Similarity=0.211 Sum_probs=30.1
Q ss_pred EecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 56 HNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 56 YNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
.|.+. ..-+|.+.+..+|+. |+ ++.++..=..++||+..+++| .+.|.|.|
T Consensus 31 ~n~~~-~~H~v~~~~~~~p~g-~~--~~~~~~~~~~~~~g~~~~~tf----~~~G~y~y 81 (98)
T 1iuz_A 31 VNNAG-FPHNIVFDEDAVPAG-VD--ADAISYDDYLNSKGETVVRKL----STPGVYGV 81 (98)
T ss_dssp EECSS-CCEEEEECTTSSCTT-CC--HHHHCEEEEECSTTCEEEEEC----CSCEEEEE
T ss_pred EECCC-CCEEEEEeCCCCccc-cc--cccccccccccCCCCEEEEEc----CCCEEEEE
Confidence 48764 677888887666642 22 122222213688999877766 45666544
No 25
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=71.69 E-value=6.4 Score=27.61 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=12.9
Q ss_pred EecCCCceEEEEEEEecceeeEee
Q 029361 91 RLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 91 rI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
.++||++.+.+ ++|.+.|.|.+
T Consensus 62 ~~~pg~~~~~~--~t~~~~G~Y~y 83 (100)
T 4hci_A 62 VVESGKEKNIT--VKPKSAGTYEL 83 (100)
T ss_dssp EECTTCEEEEE--ECCCSCEEEEE
T ss_pred eecCCcceeEE--EecccCceEEE
Confidence 36677665443 45666676643
No 26
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=70.82 E-value=24 Score=27.62 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=42.7
Q ss_pred cccceeEEEEEEEEecCCcce----eeeEEec-CC--CCCCCeeeecCc-eeeEEEEecCCCceEEEEEEE-ec
Q 029361 43 KSGAERISVSIDIHNQGTSTA----YDVSLTD-DS--WPQDKFDVISGN-ISQSWERLDAGGILSHSFELD-AK 107 (194)
Q Consensus 43 v~g~~ditV~ytIYNvG~s~A----~dV~L~D-~s--fp~e~Felv~G~-~s~~~erI~pg~nvsH~vvv~-Pk 107 (194)
..|++=+.|.++|-|.|+.+. ++.+|.| ++ +.+ .+. ..+. -......|.||..++=.++.. |+
T Consensus 43 ~~G~~fviV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~-~~~-~~~~~~~l~~g~L~pG~kvtG~ivFeVP~ 114 (159)
T 3cfu_A 43 KDDEERLIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRP-VFS-IEEKGRILMGGTLVSGKKVTGVLSYVIPK 114 (159)
T ss_dssp CCCSEEEEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCC-EEC-STTTTTBCCEEEECTTCEEEEEEEEEEST
T ss_pred CCCCEEEEEEEEEEECCCCceeeCcccEEEEeCCCCEEec-eee-ecccCCcccccccCCCCEEEEEEEEEECC
Confidence 577689999999999998643 4677765 33 222 222 1222 133457999999999988887 44
No 27
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=65.47 E-value=11 Score=36.15 Aligned_cols=84 Identities=17% Similarity=0.195 Sum_probs=55.0
Q ss_pred eeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCc-eeeEEEE---ecCCCceEEEEEEEecceeeEeeecEEEEEE
Q 029361 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-ISQSWER---LDAGGILSHSFELDAKVKGMFHGSPALITFR 122 (194)
Q Consensus 47 ~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~-~s~~~er---I~pg~nvsH~vvv~Pk~~G~fn~t~A~VtY~ 122 (194)
..++|+.++-|.|+-+..+|.-.=-+.|... +..-. -=+-|+| |+||++.+-++.|.++...+|+ . -.|.
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~--~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~~~l~~~d-~---~~~~ 688 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGK--IDKPFQELKAFHKTRLLNPGESEEVVLEIPVRDLASFN-G---EEWV 688 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSS--SCCCSCEEEEEEECCCBCTTCEEEEEEEEEGGGGCEEC-S---SCEE
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCC--CCCchHHhhcccccccCCCCCeEEEEEEECHHHhcEEc-C---CeEE
Confidence 6799999999999998777654322222211 00000 0123444 5999999999999999999998 2 3456
Q ss_pred cCCC-cceeeEeecC
Q 029361 123 IPTK-AALQEAYSTP 136 (194)
Q Consensus 123 ~se~-~~~q~a~Ss~ 136 (194)
.+.+ =++.+|-||.
T Consensus 689 ~e~G~y~v~vG~ss~ 703 (721)
T 2x41_A 689 VEAGEYEVRVGASSR 703 (721)
T ss_dssp ECCEEEEEEEEEETT
T ss_pred EeCceEEEEEECCCC
Confidence 6655 2356777764
No 28
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=64.85 E-value=7.5 Score=29.50 Aligned_cols=64 Identities=16% Similarity=0.259 Sum_probs=35.5
Q ss_pred EEEEEEEecCCcc----eeeeEEecCCC------------CCCCeeeecCcee--eEEEEecCCCceEEEEEEEecceee
Q 029361 50 SVSIDIHNQGTST----AYDVSLTDDSW------------PQDKFDVISGNIS--QSWERLDAGGILSHSFELDAKVKGM 111 (194)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~L~D~sf------------p~e~Felv~G~~s--~~~erI~pg~nvsH~vvv~Pk~~G~ 111 (194)
+|++++-|.|.-+ --++.|.+.+- +...| +..+... ..=..|.||++.++++.+...+.|.
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~t~~l~pGes~~vtf~~~~l~~G~ 105 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDY-VKAGDERVIAHTSVIGGGETDSVTFDVSKLKEGE 105 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEESSCCCTTC
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccc-cccccchhhccceeeCCCCEEEEEEeccccCCCc
Confidence 4566777999876 68888876420 00111 1111111 1224689999988888654334552
Q ss_pred -Eee
Q 029361 112 -FHG 114 (194)
Q Consensus 112 -fn~ 114 (194)
|.|
T Consensus 106 ~Y~f 109 (128)
T 2iaa_C 106 DYAF 109 (128)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 543
No 29
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=63.79 E-value=23 Score=35.81 Aligned_cols=83 Identities=13% Similarity=0.085 Sum_probs=53.9
Q ss_pred eEEEEeec-----ccccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCc-----eeeEEEEecCCCceE
Q 029361 30 FIVAHKKA-----SLKRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGN-----ISQSWERLDAGGILS 99 (194)
Q Consensus 30 ~LlvsK~i-----~~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~-----~s~~~erI~pg~nvs 99 (194)
.+.+.|-+ +...++.| +.+++..+|+|..+.+ .+|++.=. -+.+.+++++.. .+.+ =.|++|+..+
T Consensus 659 ~~~v~kp~~v~~~lP~~v~~G-d~~~l~~~v~N~~~~~-~~v~v~l~-~~~~~~~~~~~~~~~~~~~~~-v~v~~~~~~~ 734 (1325)
T 2pn5_A 659 QFTTVQPFYIVENLPYSIKRG-EAVVLQFTLFNNLGAE-YIADVTLY-NVANQTEFVGRPNTDLSYTKS-VSVPPKVGVP 734 (1325)
T ss_dssp EEEECCSEEEEEECCSEEETT-CEEEEEEEEEECSSSC-EEEEEEEE-CGGGCEEETTSCTTCCEEEEE-EEECTTCCEE
T ss_pred EEEEeeeEEEEcCCCcEEEcC-CEEEEEEEEEeCCCCc-EEEEEEEe-ecCCceEEeccCCCCCcceEE-EEECCCCeEE
Confidence 45555543 24556777 9999999999997753 44544311 111236555432 1222 3689999999
Q ss_pred EEEEEEecceeeEeeec
Q 029361 100 HSFELDAKVKGMFHGSP 116 (194)
Q Consensus 100 H~vvv~Pk~~G~fn~t~ 116 (194)
..+.|+|.+.|..+++-
T Consensus 735 v~f~i~~~~~G~~~i~v 751 (1325)
T 2pn5_A 735 ISFLIKARKLGEMAVRV 751 (1325)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEEEcccceEEEEE
Confidence 99999999888776643
No 30
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=62.97 E-value=22 Score=27.43 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=31.7
Q ss_pred EEEEEEEecCCcceeeeEEecCCCCCCC----eeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 50 SVSIDIHNQGTSTAYDVSLTDDSWPQDK----FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 50 tV~ytIYNvG~s~A~dV~L~D~sfp~e~----Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
+|++++-|.|+...-++.+...+-+-+. -.++.+.- ....|.||++-+.+++.++ +.|.|.|
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~i~PG~sgt~t~tft~-~pGtY~y 135 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTG--FSPVPKDGKFGYTDFTWHP-TAGTYYY 135 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBC--CCCCCBTTBEEEEEEEECC-CSEEEEE
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccc--cccccCCCCceEEEEEEEE-CCceEEE
Confidence 4555666876555677777643211111 11221110 0126788885555555566 7777655
No 31
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=61.73 E-value=25 Score=26.76 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=44.7
Q ss_pred CceEEEEeeccc-ccccccceeEEEEEEEEecCCcceeeeEEec----CCCCCCCeeeecCceeeEEEEecCCCceEEEE
Q 029361 28 VPFIVAHKKASL-KRLKSGAERISVSIDIHNQGTSTAYDVSLTD----DSWPQDKFDVISGNISQSWERLDAGGILSHSF 102 (194)
Q Consensus 28 ~a~LlvsK~i~~-~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D----~sfp~e~Felv~G~~s~~~erI~pg~nvsH~v 102 (194)
.|-+-++++..+ -.+..+ +..+-+++|.|.|..||. .++.. ....+.-|.+- -.=..|+||+.++-.+
T Consensus 24 ~P~i~v~~~~ldFG~v~~~-~~~~~~l~I~Ntg~vpa~-F~f~~~~~~~~~~~~wl~v~-----P~~G~L~Pge~~~I~v 96 (140)
T 3qbt_B 24 LPSLELSRREFVFENVKFR-QLQKEKFQISNNGQVPCH-FSFIPKLNDSQYCKPWLRAE-----PFEGYLEPNETVDISL 96 (140)
T ss_dssp SCCEEESCCEEEEEEECBT-CCEEEEEEEEECSSSCEE-EEEECCTTCSSSSCTTEEEE-----SCEEEECTTCEEEEEE
T ss_pred CCceEeeeeeEEeeeceee-eeeeeEEEEEcCCccceE-EEEecCCCchhhhhHhhhcC-----CcccccCCCCeeEEEE
Confidence 355555554432 234455 788999999999999984 22221 12223345442 2346899999988888
Q ss_pred EEE
Q 029361 103 ELD 105 (194)
Q Consensus 103 vv~ 105 (194)
++.
T Consensus 97 ~~~ 99 (140)
T 3qbt_B 97 DVY 99 (140)
T ss_dssp EEC
T ss_pred EEE
Confidence 876
No 32
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=60.28 E-value=17 Score=25.87 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=25.5
Q ss_pred EecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 56 HNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 56 YNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
.|.+. ..-+|.+.+...+...|+ =..|+||+..+++| .+.|.|.|
T Consensus 47 ~N~d~-~~H~v~~~~~~~~~~~~~---------s~~l~~g~~~~~tf----~~~G~y~~ 91 (106)
T 1id2_A 47 VNGEV-MPHNVAFKKGIVGEDAFR---------GEMMTKDQAYAITF----NEAGSYDY 91 (106)
T ss_dssp EECSS-SCBCCEECTTTSSSSCEE---------CCCBCTTEEEEEEE----CSCEEEEE
T ss_pred EECCC-CcEEEEEeCCCCCccccc---------ccccCCCCEEEEEe----CCCEEEEE
Confidence 37765 456666665332222232 12578898877766 45576654
No 33
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=57.79 E-value=22 Score=26.24 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=34.4
Q ss_pred EEEEEEEEecCCcceeeeEEecCC-------------------CCCCCeeeecCceeeEE--EEecCCCceEEEEEEEec
Q 029361 49 ISVSIDIHNQGTSTAYDVSLTDDS-------------------WPQDKFDVISGNISQSW--ERLDAGGILSHSFELDAK 107 (194)
Q Consensus 49 itV~ytIYNvG~s~A~dV~L~D~s-------------------fp~e~Felv~G~~s~~~--erI~pg~nvsH~vvv~Pk 107 (194)
=+|++++.|.|..+.-++.+.+.. |.++ +....-+ ..|+||++.+++|+ +.
T Consensus 43 ~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~------~~~~~~~~t~~l~pGet~~v~f~--~~ 114 (139)
T 2aan_A 43 QTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA------DKSNIIAESPLANGNETVEVTFT--AP 114 (139)
T ss_dssp CEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS------CCTTEEEECCCBCTTCEEEEEEE--CC
T ss_pred CEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc------ccccccccccccCCCCEEEEEEE--CC
Confidence 457778889987536788877532 2211 1111112 23799999887765 44
Q ss_pred ceeeEee
Q 029361 108 VKGMFHG 114 (194)
Q Consensus 108 ~~G~fn~ 114 (194)
+.|.|.|
T Consensus 115 ~pG~y~f 121 (139)
T 2aan_A 115 AAGTYLY 121 (139)
T ss_dssp SSEEEEE
T ss_pred CCeEEEE
Confidence 6677654
No 34
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=54.39 E-value=9.9 Score=30.38 Aligned_cols=64 Identities=11% Similarity=0.171 Sum_probs=35.1
Q ss_pred EEEEEEEecCCcc----eeeeEEecCCCCC-----------CCeeeecCcee--eEEEEecCCCceEEEEEEEecceeeE
Q 029361 50 SVSIDIHNQGTST----AYDVSLTDDSWPQ-----------DKFDVISGNIS--QSWERLDAGGILSHSFELDAKVKGMF 112 (194)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~L~D~sfp~-----------e~Felv~G~~s--~~~erI~pg~nvsH~vvv~Pk~~G~f 112 (194)
+|++++-|.|+.+ --++.|.+.+-.. ..| +..+... ..=..|.||++.+.+|.+.+.+.|.|
T Consensus 68 ~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~-v~~~d~~vl~~t~~l~pGet~svtf~~~~lkpG~Y 146 (167)
T 3ay2_A 68 EFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDY-VKPDDARVVAHTKLIGGGEESSLTLDPAKLADGDY 146 (167)
T ss_dssp SEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTT-SCTTCTTEEEECCCBCTTCEEEEEECGGGGTTSCE
T ss_pred EEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhcccccc-ccccccchhccceeeCCCCEEEEEEecCCCCCcEE
Confidence 3456777999876 5778776532000 000 1111111 12245888988888876544466766
Q ss_pred ee
Q 029361 113 HG 114 (194)
Q Consensus 113 n~ 114 (194)
.|
T Consensus 147 ~f 148 (167)
T 3ay2_A 147 KF 148 (167)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 35
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=52.37 E-value=59 Score=26.01 Aligned_cols=63 Identities=16% Similarity=0.377 Sum_probs=46.2
Q ss_pred eEEEEEEEEecCCcceeeeEEecCCCCCC------CeeeecCceeeEEEEecCCCceEEEEEEEecceeeEe
Q 029361 48 RISVSIDIHNQGTSTAYDVSLTDDSWPQD------KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFH 113 (194)
Q Consensus 48 ditV~ytIYNvG~s~A~dV~L~D~sfp~e------~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn 113 (194)
.++++|..-=.....-..+=|+.++|.+. +||++. ...=.-..|+..++|.+.|=..+.|++-
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YITK~gwdp~~pLtw~dle~~~---~~~~~~~~p~~~y~~~v~lP~~rsG~hV 143 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYITKNGWNPNQPLDIKNFDKIA---SIDGKQEVPNKVVKQTINIPTDRKGYHV 143 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEECTTCCTTSCCCGGGEEEEE---EEEEEEECCCSEEEEEEEECTTCCEEEE
T ss_pred ceEEEEeeecccCCCeEEEEEcCCCCCCCCCccHHHCeeee---eecCCCcCCCCeEEEEEEeCCCCccCEE
Confidence 48999988888887889999999999873 688766 2222224567889999986324788773
No 36
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=52.25 E-value=48 Score=31.88 Aligned_cols=85 Identities=16% Similarity=0.268 Sum_probs=53.1
Q ss_pred eeEEEEEEEEecCCcceeeeEEecCCCCCCC----eeeecCceeeEEEEecCCCceEEEEEEEecceeeEeeecEEEEEE
Q 029361 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQDK----FDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFR 122 (194)
Q Consensus 47 ~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~----Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~A~VtY~ 122 (194)
..++|+.+|-|.|+-+..+|.-.=-+.|... -.-+.|= .+.. |+||++.+-+|.|.++...+|+-.. -.|.
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF--~kv~-L~pGes~~V~~~l~~~~ls~~d~~~--~~w~ 687 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGF--AKLN-LTPGQSGTATFNIRRRDLSYWDTAS--QKWV 687 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEE--EEEE-ECTTCEEEEEEEEEGGGGCEEETTT--TEEE
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhc--ccce-eCCCCeEEEEEEEcHHHeeeeecCC--CeEE
Confidence 6799999999999998877654322222211 0011111 1333 9999999999999999999887532 1344
Q ss_pred cCCC-cceeeEeecC
Q 029361 123 IPTK-AALQEAYSTP 136 (194)
Q Consensus 123 ~se~-~~~q~a~Ss~ 136 (194)
.+.+ =++.+|-||.
T Consensus 688 ve~G~y~v~vG~sS~ 702 (713)
T 3zyz_A 688 VPSGSFGISVGASSR 702 (713)
T ss_dssp ECCEEEEEEEESSSS
T ss_pred EcCceEEEEEECCCC
Confidence 4444 2244555553
No 37
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A
Probab=52.05 E-value=50 Score=29.95 Aligned_cols=68 Identities=16% Similarity=0.220 Sum_probs=46.5
Q ss_pred cccccccccceeEEEEEEEEecCCcceeeeE--Ee---c-CCCCCCCeeeecCceeeEEE---EecCCCceEEEEEEEec
Q 029361 37 ASLKRLKSGAERISVSIDIHNQGTSTAYDVS--LT---D-DSWPQDKFDVISGNISQSWE---RLDAGGILSHSFELDAK 107 (194)
Q Consensus 37 i~~~~~v~g~~ditV~ytIYNvG~s~A~dV~--L~---D-~sfp~e~Felv~G~~s~~~e---rI~pg~nvsH~vvv~Pk 107 (194)
+.-+-.+.| +.|.|+++|-|.-+.+...|+ |. | --|..+.|.-. -+..| -|+||++.++++.|+|.
T Consensus 219 LdK~~Y~pG-E~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~y~~~----Va~~E~~epV~pgst~~k~~~l~P~ 293 (380)
T 3ugu_A 219 LSKEIYYHG-EPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKT----VAAEEAQEKVPPNSSLTKTLTLVPL 293 (380)
T ss_dssp ESCSEEETT-CCEEEEEEEEECSSSCEEEEEEEEEEEEEECSSSCCEEEEE----EEEEECSCCBCTTEEEEEEEEECCC
T ss_pred eCCccCcCC-CEEEEEEEEEcCCCCeEeEEEEEEEEEEEEEEecCCeEEEE----EEEeccCCcCCCCCeEEeeEEEEEe
Confidence 344566778 999999999999998876553 32 3 22444433322 12222 78999999999999997
Q ss_pred ce
Q 029361 108 VK 109 (194)
Q Consensus 108 ~~ 109 (194)
-.
T Consensus 294 l~ 295 (380)
T 3ugu_A 294 LA 295 (380)
T ss_dssp GG
T ss_pred cc
Confidence 53
No 38
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=51.53 E-value=49 Score=23.22 Aligned_cols=23 Identities=30% Similarity=0.303 Sum_probs=16.4
Q ss_pred EecCCCceEEEEEEEecceeeEeee
Q 029361 91 RLDAGGILSHSFELDAKVKGMFHGS 115 (194)
Q Consensus 91 rI~pg~nvsH~vvv~Pk~~G~fn~t 115 (194)
.++||+..+.+|. +.+.|.|.+-
T Consensus 72 ~i~pG~~~~~~f~--~~~~G~y~~~ 94 (112)
T 1iby_A 72 VIKAGETKTISFT--ADKAGAFTIW 94 (112)
T ss_dssp EECTTCEEEEEEE--CCSCEEEEEB
T ss_pred EeCCCCEEEEEEE--CCCCEEEEEE
Confidence 4889988877764 5677877553
No 39
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=48.72 E-value=13 Score=28.05 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=15.8
Q ss_pred EEEEEEEecCCcc----eeeeEEecC
Q 029361 50 SVSIDIHNQGTST----AYDVSLTDD 71 (194)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~L~D~ 71 (194)
+|++++-|.|.-+ .-++.|.+.
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~ 53 (129)
T 2ccw_A 28 QFTMHLKHVGKMAKVAMGHNLVLTKD 53 (129)
T ss_dssp EEEEEEEECSCCCHHHHCBCCEEEEG
T ss_pred EEEEEEEECCCcccccCcceEEEcCc
Confidence 4456677999876 678887753
No 40
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=48.43 E-value=28 Score=26.04 Aligned_cols=35 Identities=11% Similarity=0.267 Sum_probs=22.3
Q ss_pred eeeeEEecCCCCCC--CeeeecCceeeEEEEecCCCceEEEEEEEecceeeEe
Q 029361 63 AYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFH 113 (194)
Q Consensus 63 A~dV~L~D~sfp~e--~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn 113 (194)
.-+|...+..+|.. .|+ +.||+..+++| .+.|.|.
T Consensus 39 ~H~v~~~~~~~P~g~~~f~------------~~pg~t~s~TF----~~pG~y~ 75 (123)
T 3erx_A 39 SHNVEAIKEILPEGVESFK------------SKINESYTLTV----TEPGLYG 75 (123)
T ss_dssp TCCCEECTTSSCTTCCCCB------------CCTTCCEEEEE----CSCEEEE
T ss_pred CceEEEcCCcCCCCcccee------------cCCCCEEEEEe----CCCeEEE
Confidence 37777776656653 343 35898888887 4556664
No 41
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=46.40 E-value=30 Score=23.56 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=28.9
Q ss_pred EEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 55 IYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
+.|.+. ..-++.+.+..+|.. ++ .|.+...=..++||++.+++|. +.|.|.|
T Consensus 30 ~~n~~~-~~H~~~~~~~~~p~~-~~--~~~~~~~~~~~~pG~~~~~tf~----~~G~y~y 81 (98)
T 2plt_A 30 FVNNAG-FPHNIVFDEDAIPSG-VN--ADAISRDDYLNAPGETYSVKLT----AAGEYGY 81 (98)
T ss_dssp EEECSS-CCEEEEECGGGSCTT-CC--HHHHCEEEEECSTTCEEEEECC----SCEEEEE
T ss_pred EEECCC-CceEEEEeCCCCCCc-cc--cccccccceecCCCCEEEEEeC----CCeEEEE
Confidence 368864 467888877656532 21 1111112236789988877653 4565543
No 42
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=45.31 E-value=29 Score=26.16 Aligned_cols=54 Identities=11% Similarity=0.341 Sum_probs=30.3
Q ss_pred EEEEEEEecCCcc----eeeeEEecCC---------C---CCCCeeeecCcee--eEEEEecCCCceEEEEEE
Q 029361 50 SVSIDIHNQGTST----AYDVSLTDDS---------W---PQDKFDVISGNIS--QSWERLDAGGILSHSFEL 104 (194)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~L~D~s---------f---p~e~Felv~G~~s--~~~erI~pg~nvsH~vvv 104 (194)
+|++++-|.|.-+ .-++.|.+.+ . +...| +-.+... ..=..|.||++.++++..
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~-~~~~~~~~~~~t~~l~pGet~svtf~~ 99 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQY-LKDGDARVIAHTKVIGAGEKDSVTFDV 99 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTT-SCTTCTTEEEECCCBCTTCEEEEEEEG
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccc-cccccchhheeeeeeCCCCEEEEEEec
Confidence 4566777999876 5788886531 1 00111 1111111 122358999998888865
No 43
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=45.23 E-value=31 Score=26.01 Aligned_cols=50 Identities=6% Similarity=0.186 Sum_probs=30.1
Q ss_pred EEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEeeecEEEEEEcCCC
Q 029361 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRIPTK 126 (194)
Q Consensus 54 tIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~A~VtY~~se~ 126 (194)
+..|.+ ..-+|...|..+|+..-. | .+.||+..+|+| .+.|.| .|....-
T Consensus 33 ~f~n~~--~~Hnv~~~~~~~p~g~~~---------~-~~~pg~t~s~TF----~~~G~y-------~Y~C~~H 82 (124)
T 3ef4_A 33 KFVPTD--KSHNAESVREVWPEGVAP---------V-KGGFSKEVVFNA----EKEGLY-------VLKCAPH 82 (124)
T ss_dssp EEECSS--SSCCCEECTTTSCTTSCC---------C-BCCTTCCEEEEC----CSSEEE-------EEECTTT
T ss_pred EEEECC--CCccEEEeCCcCCCCccc---------c-ccCCCCEEEEEe----CCCeEE-------EEEcCCC
Confidence 344665 577888877767753210 1 245899888888 344554 5666543
No 44
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=43.04 E-value=33 Score=25.81 Aligned_cols=41 Identities=7% Similarity=0.199 Sum_probs=24.4
Q ss_pred EEecCCcceeeeEEecCCCCCC--CeeeecCceeeEEEEecCCCceEEEEEEEecceeeEe
Q 029361 55 IHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFH 113 (194)
Q Consensus 55 IYNvG~s~A~dV~L~D~sfp~e--~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn 113 (194)
+.|.+. .-+|...|..+|.. .|+. .||+..+++| .+.|.|.
T Consensus 35 f~n~~~--~H~v~~~~~~~P~g~~~f~s------------~pGet~s~TF----~~pG~y~ 77 (127)
T 3tu6_A 35 FVAKDK--GHNSALMKGGAPEGAETWKG------------KINEEITVTL----SKPGVYM 77 (127)
T ss_dssp EECSSS--SCCCEECTTCSCTTCCCCBC------------CTTCCCEEEC----CSCEEEE
T ss_pred EEECCC--CceEEEccCcCCCCccceec------------CCCCEEEEEe----CCCeEEE
Confidence 344443 47887776656653 2322 5898888777 4556554
No 45
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=40.72 E-value=23 Score=24.15 Aligned_cols=51 Identities=10% Similarity=0.103 Sum_probs=28.8
Q ss_pred EEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 54 tIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
++.|.+. ..-++.+.+..+|.+. . ..+..=..++||++.+++| .+.|.|.|
T Consensus 30 ~~~n~~~-~~H~~~~~~~~~~~~~----~-~~~~~~~~~~~g~~~~~tf----~~~G~y~y 80 (97)
T 1b3i_A 30 EFVMNKV-GPHNVIFDKVPAGESA----P-ALSNTKLAIAPGSFYSVTL----GTPGTYSF 80 (97)
T ss_dssp EEEECSS-CCCCBEEEECCTTSCH----H-HHCBCCCCCSCSCCEEEEC----CSCSEEEE
T ss_pred EEEECCC-CCeEEEEeCCCCcccc----c-cccccceecCCCCEEEEEe----CCCeEEEE
Confidence 3348764 4678888776665321 0 0000112578999888866 45566543
No 46
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=39.71 E-value=39 Score=23.01 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=25.0
Q ss_pred EecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 56 HNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 56 YNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
.|.+. ..-++.+.+..+|... .+..+..=..++||++.+++| .+.|.|.|
T Consensus 32 ~n~~~-~~H~~~~~~~~~pg~~----~~~~~~~~~~~~pG~~~~~tf----~~~G~y~~ 81 (98)
T 1pcs_A 32 VNNKL-SPHNIVFDADGVPADT----AAKLSHKGLLFAAGESFTSTF----TEPGTYTY 81 (98)
T ss_dssp EECSS-CCEEEEECCSSSCHHH----HHHHCEEEEECSTTCEEEEEC----CSCEEEEE
T ss_pred EECCC-CCcEEEEeCCCCCccc----cccccccccccCCCCEEEEEc----CCCeEEEE
Confidence 37654 4577777765554100 000111113578888777765 34565543
No 47
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=38.41 E-value=1.4e+02 Score=23.82 Aligned_cols=65 Identities=17% Similarity=0.095 Sum_probs=43.2
Q ss_pred ccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecce---eeEee
Q 029361 40 KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVK---GMFHG 114 (194)
Q Consensus 40 ~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~---G~fn~ 114 (194)
..+.+| ++.+.++++.|.|+.|-. +++. .- +..|.+ +..=+.|+||+...-.++.-++.. |.+.-
T Consensus 13 g~v~~g-~~~~~~~~i~N~g~~pl~-i~~~--~~-p~~~~~-----~~~~~~I~PG~~g~I~vt~~~~~~~~~G~~~~ 80 (220)
T 2qsv_A 13 PISMPE-DEGVVRLVVNNTDESDLQ-VAVV--SL-PSFVSL-----DDRAFRLQAREPRELNLSLAVPRNMPPGMKDE 80 (220)
T ss_dssp CSBCTT-CCCEEEEEEEECSSSCEE-EEEE--EC-CTTEEC-----SCCEEEECSSSCEEEEEEECCCTTCCSEEEEE
T ss_pred ccccCC-CcceEEEEEEeCCCCceE-EEec--cC-CCceEe-----eeCcceeCCCCceEEEEEEcchhcccCCceee
Confidence 344566 888999999999996543 3332 11 222322 234578999999999999988885 55543
No 48
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=37.37 E-value=40 Score=26.03 Aligned_cols=51 Identities=16% Similarity=0.337 Sum_probs=33.0
Q ss_pred cccccccceeEEEEEEEEecCCcceeeeEEecC------CCC-CCCeeeec--------CceeeEEEEecC
Q 029361 39 LKRLKSGAERISVSIDIHNQGTSTAYDVSLTDD------SWP-QDKFDVIS--------GNISQSWERLDA 94 (194)
Q Consensus 39 ~~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~------sfp-~e~Felv~--------G~~s~~~erI~p 94 (194)
++....| +-+. |.|.+...-..|.++|- ..+ ++.|+-+. |.+.++|+.++=
T Consensus 58 ~~g~~CG-~cv~----Vtn~~nGksV~V~VvD~CP~ggLDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~V~C 123 (125)
T 1bw3_A 58 RGQAACG-KCLR----VTNPATGAQITARIVDQCANGGLDLDWDTVFTKIDTNGIGYQQGHLNVNYQFVDC 123 (125)
T ss_dssp CSGGGTT-CEEE----EEETTTTEEEEEEEEECCSSSSCCSCSSSSHHHHCSSCHHHHHSEEEEEEEEECC
T ss_pred CCCcccC-CEEE----eEeCCCCCEEEEEEEEeCCCCCCCCCCHHHHHHHhccCCcccCcEEEEEEEEEeC
Confidence 3445567 6444 44666566777888873 345 67887664 557888888763
No 49
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=36.61 E-value=29 Score=36.20 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=53.9
Q ss_pred eEEEEeecc-----cccccccceeEEEEEEEEecCCcc-eeeeEEecCCCCCCCeeeecCce---------eeEEEEecC
Q 029361 30 FIVAHKKAS-----LKRLKSGAERISVSIDIHNQGTST-AYDVSLTDDSWPQDKFDVISGNI---------SQSWERLDA 94 (194)
Q Consensus 30 ~LlvsK~i~-----~~~~v~g~~ditV~ytIYNvG~s~-A~dV~L~D~sfp~e~Felv~G~~---------s~~~erI~p 94 (194)
.+.+.|-+- ...++.| +.+++..+|||..+.+ -..|+|.- .+.|++..+.. ..+-=.|++
T Consensus 816 ~~~v~kpf~v~~~LP~~v~~G-D~~~i~~~V~N~~~~~~~v~v~l~~----~~~~~~~~~~~~~~~~~~~~~~~~v~v~a 890 (1676)
T 3cu7_A 816 KAKVFKDVFLEMNIPYSVVRG-EQIQLKGTVYNYRTSGMQFCVKMSA----VEGICTSESPVIDHQGTKSSKCVRQKVEG 890 (1676)
T ss_dssp EEEECCSEEEEEECCSCEETT-CCEEEEEEEEECSSSCBCCCCEECC----CTTEECSSCC----------CCCCCCBCT
T ss_pred EEEEEeeEEEEccCCcEEEEC-cEEEEEEEEEcCCCCcEEEEEEEec----CCCeEEeccccccccccccceeEEEEECC
Confidence 455555432 3456777 9999999999998753 23444432 34565554321 012235789
Q ss_pred CCceEEEEEEEecceeeEeeecE
Q 029361 95 GGILSHSFELDAKVKGMFHGSPA 117 (194)
Q Consensus 95 g~nvsH~vvv~Pk~~G~fn~t~A 117 (194)
|+..+..+.|+|.+.|..+++-.
T Consensus 891 ~~~~~v~f~i~p~~~G~~~i~v~ 913 (1676)
T 3cu7_A 891 SSSHLVTFTVLPLEIGLHNINFS 913 (1676)
T ss_dssp TEEEECCEEEEECSSSCCCEEEE
T ss_pred CCeEEEEEEEEEcccCcEEEEEE
Confidence 99999999999998887766543
No 50
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=35.90 E-value=80 Score=23.22 Aligned_cols=43 Identities=12% Similarity=0.177 Sum_probs=25.7
Q ss_pred EEEecCCcceeeeEEecCCCCCC--CeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 54 DIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 54 tIYNvG~s~A~dV~L~D~sfp~e--~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
++.|.+. .-+|.+.++.+|+. .|+ +.||+..+++| .+.|.|.+
T Consensus 32 ~f~n~d~--~H~v~~~~~~~p~~~~~~~------------~~~g~t~~~tF----~~~G~y~y 76 (122)
T 2ux6_A 32 TFIPTDK--GHNVETIKGMIPDGAEAFK------------SKINENYKVTF----TAPGVYGV 76 (122)
T ss_dssp EEEESSS--SCCCEECTTCSCTTCCCCB------------CCTTCCEEEEE----CSCEEEEE
T ss_pred EEEECCC--CcEEEEcccccCCCcceee------------cCCCCEEEEEe----CCCEEEEE
Confidence 3457765 57787776555543 232 25888888777 34565543
No 51
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=34.83 E-value=49 Score=24.85 Aligned_cols=64 Identities=14% Similarity=0.227 Sum_probs=33.4
Q ss_pred EEEEEEEecCCcc----eeeeEEecCCC------------CCCCeeeecCcee--eEEEEecCCCceEEEEEEEe-ccee
Q 029361 50 SVSIDIHNQGTST----AYDVSLTDDSW------------PQDKFDVISGNIS--QSWERLDAGGILSHSFELDA-KVKG 110 (194)
Q Consensus 50 tV~ytIYNvG~s~----A~dV~L~D~sf------------p~e~Felv~G~~s--~~~erI~pg~nvsH~vvv~P-k~~G 110 (194)
+|++++-|.|.-+ --++.|...+- +...| +..+... ..=..|.||++.+.+|...- .+.|
T Consensus 28 ~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~-v~~~~~~~~~~t~~l~pGet~svtf~~~~~~~~G 106 (129)
T 1cuo_A 28 EFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNF-VTPGDKRVIAFTPIIGGGEKTSVKFKVSALSKDE 106 (129)
T ss_dssp EEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTT-SCTTCTTCSEECCCBCTTCEEEEEEEGGGCCTTS
T ss_pred EEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccc-cccccccceeeeeEECCCCEEEEEEeccccCCCc
Confidence 4566777999876 57777775321 00011 1111111 12245889988887775310 2456
Q ss_pred eEee
Q 029361 111 MFHG 114 (194)
Q Consensus 111 ~fn~ 114 (194)
.|.|
T Consensus 107 ~Y~f 110 (129)
T 1cuo_A 107 AYTY 110 (129)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 5544
No 52
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=34.76 E-value=88 Score=22.98 Aligned_cols=52 Identities=15% Similarity=0.330 Sum_probs=40.9
Q ss_pred eeEEEEEEEEecCCc-ceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEec
Q 029361 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (194)
Q Consensus 47 ~ditV~ytIYNvG~s-~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk 107 (194)
+..+-..+|+|..+. -|+.|+-+.+ +.|- ..-....|+||+++.-.+.+.|.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p----~~y~-----VrP~~G~i~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAP----RRYC-----VRPNSGVIDPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCG----GGEE-----EESCEEEECTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCC----CceE-----EeCCCcEECCCCeEEEEEEECcC
Confidence 678899999999887 6889888764 4452 23456899999999988888764
No 53
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=34.54 E-value=1.9e+02 Score=24.12 Aligned_cols=18 Identities=11% Similarity=0.252 Sum_probs=13.5
Q ss_pred eeEEEEEEEEecCCccee
Q 029361 47 ERISVSIDIHNQGTSTAY 64 (194)
Q Consensus 47 ~ditV~ytIYNvG~s~A~ 64 (194)
.+=.++++|.|.|+.|.+
T Consensus 42 ~~k~~sl~l~N~~~~P~L 59 (257)
T 3q48_A 42 SEREVTLRVSNTSGTPVL 59 (257)
T ss_dssp TCSEEEEEEEECSSSCEE
T ss_pred CCcEEEEEEEeCCCCeEE
Confidence 445688899999987543
No 54
>3uam_A Chitin binding domain; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, protein binding; 2.00A {Burkholderia pseudomallei}
Probab=34.24 E-value=65 Score=26.93 Aligned_cols=68 Identities=19% Similarity=0.349 Sum_probs=46.2
Q ss_pred ccceeEEEEEEEEecCCcceeeeEEecCCCCCC------Ceeee-----cCceeeEE-----EEecCCCceEEEEEEEec
Q 029361 44 SGAERISVSIDIHNQGTSTAYDVSLTDDSWPQD------KFDVI-----SGNISQSW-----ERLDAGGILSHSFELDAK 107 (194)
Q Consensus 44 ~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e------~Felv-----~G~~s~~~-----erI~pg~nvsH~vvv~Pk 107 (194)
.| ..++|+|..-=.....-..+=|+.++|.+. +||++ .+...-.| +...|+.+++|.+.| |.
T Consensus 110 ~G-~~~tf~w~~TA~H~ts~f~~YITK~gwdp~~pLtw~dLEl~pf~~~~~~~~p~~~~~~d~~~~p~~~y~~~v~l-P~ 187 (216)
T 3uam_A 110 SG-QSLQISWSYSMPHKTRRWTYWITKPGWDTQARLARAHFEPDPLKVYLNTYQPYWGPDADKELIPQGETIHEFNL-PT 187 (216)
T ss_dssp TT-CEEEEEEEEESCCCEEEEEEEEBCTTCCTTSCCCGGGBCSSCSEEEECCCCSTTSTTHHHHHSCSSCEEEEEEC-CS
T ss_pred cC-ceEEEEEEeeccCCCceEEEEECCCCCCCCCcccHHHccccceeeccCCCccccccccccccCCCCeEEEEEEC-CC
Confidence 35 779999999888877779999999999764 45532 11111111 223467789999877 68
Q ss_pred ceeeEe
Q 029361 108 VKGMFH 113 (194)
Q Consensus 108 ~~G~fn 113 (194)
+.|++-
T Consensus 188 RsG~hV 193 (216)
T 3uam_A 188 RTGYHV 193 (216)
T ss_dssp CCEEEE
T ss_pred CcCCEE
Confidence 888873
No 55
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=33.85 E-value=60 Score=22.09 Aligned_cols=54 Identities=15% Similarity=0.163 Sum_probs=29.8
Q ss_pred EEEecCCcceeeeEEecCCCCCCCeeeec-CceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 54 DIHNQGTSTAYDVSLTDDSWPQDKFDVIS-GNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 54 tIYNvG~s~A~dV~L~D~sfp~e~Felv~-G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
++-|.+. ..-+|.+.+..+|... +.-. +..... -.++||++.+++|. +.|.|.|
T Consensus 28 ~~~n~~~-~~H~v~~~~~~~p~~~-~~~~~~~~~~~-~~~~~G~~~~~tf~----~~G~y~~ 82 (99)
T 1plc_A 28 VFKNNAG-FPHNIVFDEDSIPSGV-DASKISMSEED-LLNAKGETFEVALS----NKGEYSF 82 (99)
T ss_dssp EEEECSS-CCBCCEECTTSSCTTC-CHHHHCCCTTC-CBCSTTCEEEEECC----SCEEEEE
T ss_pred EEEECCC-CceEEEEeCCCCcccc-cccccccccCc-cccCCCCEEEEEEC----CCceEEE
Confidence 3468874 5678888887676431 1000 000000 24789998887663 5666544
No 56
>3a0j_A Cold shock protein; OB-fold, cytoplasm, transcription, structural genomics, NPPSFA; 1.65A {Thermus thermophilus}
Probab=33.00 E-value=69 Score=21.74 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=30.7
Q ss_pred CCCceEEEEeecccc----cccccceeEEEEEEEEe--cCCcceeeeEEecC
Q 029361 26 SDVPFIVAHKKASLK----RLKSGAERISVSIDIHN--QGTSTAYDVSLTDD 71 (194)
Q Consensus 26 ~~~a~LlvsK~i~~~----~~v~g~~ditV~ytIYN--vG~s~A~dV~L~D~ 71 (194)
+++..+++|..-+.. .|.+| +.++++..--. -| -.|.+|.+.|.
T Consensus 21 ~~g~dvFvH~s~i~~~g~~~l~~G-~~V~f~~~~~~~~kG-~~A~~V~~~~~ 70 (73)
T 3a0j_A 21 EGDTDVFVHYTAINAKGFRTLNEG-DIVTFDVEPGRNGKG-PQAVNVTVVEP 70 (73)
T ss_dssp TTSCCEEEEGGGBCSSSCSSCCTT-CEEEEEEECCSCCSS-SEEEEEEEEEC
T ss_pred CCCCcEEEEhhhccccCCCCCCCC-CEEEEEEEECCCCCC-CEEEEEEeCCC
Confidence 445779999988764 57788 77665554333 34 57999999874
No 57
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=32.70 E-value=75 Score=22.20 Aligned_cols=20 Identities=15% Similarity=0.213 Sum_probs=13.3
Q ss_pred EecCCCceEEEEEEEecceeeEee
Q 029361 91 RLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 91 rI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
.|+||+..+++| .+.|.|.+
T Consensus 71 ~~~pG~~~~~tf----~~~G~y~y 90 (105)
T 2ov0_A 71 MMKKEQAYSLTF----TEAGTYDY 90 (105)
T ss_dssp CBCTTEEEEEEE----CSCEEEEE
T ss_pred ccCCCCEEEEEe----CCCEEEEE
Confidence 478888777665 45665544
No 58
>2l9d_A Uncharacterized protein; PG9854E, structural genomics, PSI-biology, protein structure initiative, unknown function; NMR {Methylobacillus flagellatus}
Probab=32.16 E-value=12 Score=28.57 Aligned_cols=26 Identities=4% Similarity=0.104 Sum_probs=20.5
Q ss_pred ecCCCcceeeecCchhhhh---HHHHHHH
Q 029361 134 STPMLPLDVLAEKPTENKL---ELAKRLL 159 (194)
Q Consensus 134 Ss~pg~~~I~~~~~ydrkf---ewa~~l~ 159 (194)
+..+.+.-|..--.-.|+| |||+||.
T Consensus 7 ~~~~~e~iI~GiT~~Gk~FRPSDWAERL~ 35 (108)
T 2l9d_A 7 KSGIKEIIIQGLTRAGKPFRPSDWVDRMC 35 (108)
T ss_dssp CCCCCEEEEEEEETTSCBCSCTTHHHHHH
T ss_pred cCCcceEEEEeecCCCCCcCCchHHHHHh
Confidence 4455666777777888899 9999998
No 59
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=31.75 E-value=1.7e+02 Score=26.23 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=41.9
Q ss_pred ccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEec---ceeeEeee
Q 029361 42 LKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK---VKGMFHGS 115 (194)
Q Consensus 42 ~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk---~~G~fn~t 115 (194)
+..| +..+|+.+|-|.+..+..+.+++ . --+..|+.-. ....++||++.+-.+.|++. ..|.|..+
T Consensus 369 ~~~g-~~~~~~~~vtn~~~~~~~~~~~~-~-~~~~~~~~~~-----~~~~~~~g~~~t~~~~vt~~~~~~~g~y~l~ 437 (601)
T 1w8o_A 369 LEPG-QQVTVPVAVTNQSGIAVPKPSLQ-L-DASPDWQVQG-----SVEPLMPGRQAKGQVTITVPAGTTPGRYRVG 437 (601)
T ss_dssp ECTT-CEEEEEEEEECCSSSCBSSCEEE-E-ECCTTSEEEE-----EECCBCTTCEEEEEEEEECCTTCCCEEEEEE
T ss_pred ecCC-ceeEEEEEEECCCceeccCceEE-E-ecCCCcEEec-----cccccCCCCceEEEEEEecCCCCCCCcEEee
Confidence 4466 88899999999877655444333 1 1134443322 35778899998887777754 44666443
No 60
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=30.79 E-value=76 Score=23.42 Aligned_cols=42 Identities=12% Similarity=0.163 Sum_probs=25.0
Q ss_pred EEEecCCcceeeeEEecCCCCCC--CeeeecCceeeEEEEecCCCceEEEEEEEecceeeEe
Q 029361 54 DIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFH 113 (194)
Q Consensus 54 tIYNvG~s~A~dV~L~D~sfp~e--~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn 113 (194)
+..|.+. .-+|.+.++.+|.. .|. +.||+..+++| .+.|.|.
T Consensus 32 ~f~n~~~--~H~v~~~~~~~p~~~~~~~------------~~pG~t~~~tF----~~~G~y~ 75 (123)
T 1pmy_A 32 KFLPTDK--GHNVETIKGMAPDGADYVK------------TTVGQEAVVKF----DKEGVYG 75 (123)
T ss_dssp EEECSSS--SCCCEECTTSSCTTCCCCB------------CCTTSCEEEEC----CSCEEEE
T ss_pred EEEECCC--CcEEEEecccCCCCcccee------------cCCCCEEEEEe----CCCeEEE
Confidence 3456654 57777776656643 332 35888877776 3445543
No 61
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=30.46 E-value=37 Score=23.42 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=29.2
Q ss_pred EecCCcceeeeEEecCCCCCCCeeeecCc----eeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 56 HNQGTSTAYDVSLTDDSWPQDKFDVISGN----ISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 56 YNvG~s~A~dV~L~D~sfp~e~Felv~G~----~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
.|.+. ..-++.+.+..+|.+ .|. +...=..|+||++.+++|+ .|.+.|.|.|
T Consensus 33 ~n~~~-~~H~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~pG~~~~~~f~-~~~~~G~y~y 88 (106)
T 2gim_A 33 LNNKV-PPHNVVFDAALNPAK-----SADLAKSLSHKQLLMSPGQSTSTTFP-ADAPAGEYTF 88 (106)
T ss_dssp EECSS-SCCCBEECSSSSTTC-----CHHHHHHHCBCSCCCSTTCEEEEECC-TTCCSEEEEE
T ss_pred EECCC-CCceEEEeCCCCccc-----ccccchhccccceeeCCCCEEEEEEe-cCCCCceEEE
Confidence 38764 457788877666642 221 1111124789988776443 1267777654
No 62
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=29.54 E-value=1.1e+02 Score=30.05 Aligned_cols=61 Identities=16% Similarity=0.302 Sum_probs=35.4
Q ss_pred eeEEEEEEEEecCCcc---eeeeEEecCCCCCCCeeeecCce---eeEEEEecCCCceEEEEEEEec
Q 029361 47 ERISVSIDIHNQGTST---AYDVSLTDDSWPQDKFDVISGNI---SQSWERLDAGGILSHSFELDAK 107 (194)
Q Consensus 47 ~ditV~ytIYNvG~s~---A~dV~L~D~sfp~e~Felv~G~~---s~~~erI~pg~nvsH~vvv~Pk 107 (194)
...+++.++.|+|+.+ -|.+++.-+.=+.-.+.+....+ +..-=.|+||+..+-+|++.+.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~~~vt~~~~ 565 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQVTVPIDAS 565 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEEEEEEEECH
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEEEEEEEEcC
Confidence 4678899999999854 24444432100011122222211 1123368899999999999975
No 63
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=29.04 E-value=38 Score=23.09 Aligned_cols=54 Identities=15% Similarity=0.107 Sum_probs=29.1
Q ss_pred EEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 55 IHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 55 IYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
+-|.+. ..-++.+.+..||.. ++--.+.....=-.|+||++.+++|. +.|.|.|
T Consensus 29 ~~n~~~-~~H~~~~~~~~~p~g-~~~~~~~~~~~~~~~~~G~~~~~~f~----~~G~y~~ 82 (99)
T 1byp_A 29 FKNNAG-FPHNDLFDKKEVPAG-VDVTKISMPEEDLLNAPGEEYSVTLT----EKGTYKF 82 (99)
T ss_dssp EEECSS-CCBCCEECTTSSCTT-CCHHHHSCCTTCCBCSTTCEEEEEEC----SCEEEEE
T ss_pred EEECCC-CcceEEEeCCCCccc-cccccccccccceeeCCCCEEEEEeC----CCcEEEE
Confidence 368874 568888887667542 21100000000025789998887663 5666543
No 64
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=28.79 E-value=1.1e+02 Score=21.43 Aligned_cols=65 Identities=15% Similarity=0.290 Sum_probs=42.8
Q ss_pred cccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEeeecEEEE
Q 029361 41 RLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALIT 120 (194)
Q Consensus 41 ~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~A~Vt 120 (194)
...+| +...++++-.+.|. ....|++++++ |. ... -.+....+=++.+.-+|...|.|... |+
T Consensus 20 ~~~vg-~~~~F~V~~~~aG~-~~l~v~i~~~~----------g~-~~~-~~v~d~~dGty~V~Y~p~~~G~y~i~---V~ 82 (100)
T 3rgh_A 20 RATAG-EVGQFQVDCSSAGS-AELTIEICSEA----------GL-PAE-VYIQDHGDGTHTITYIPLCPGAYTVT---IK 82 (100)
T ss_dssp EEETT-SCEEEEEECTTSCS-CCEEEEEECTT----------SC-BCE-EEEEECSSSEEEEEEECCSSEEEEEE---EE
T ss_pred CeEcC-CcEEEEEEECCCCC-ceEEEEEECCC----------CC-EeE-EEEEeCCCCEEEEEEEeCCCeeEEEE---EE
Confidence 35677 88888888888876 46888888642 21 112 23334555678888888888888764 56
Q ss_pred EE
Q 029361 121 FR 122 (194)
Q Consensus 121 Y~ 122 (194)
|.
T Consensus 83 ~~ 84 (100)
T 3rgh_A 83 YG 84 (100)
T ss_dssp ET
T ss_pred EC
Confidence 64
No 65
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=28.71 E-value=1.5e+02 Score=22.75 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=43.0
Q ss_pred ccceeEEEEEEEEecCCc-ceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEec
Q 029361 44 SGAERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (194)
Q Consensus 44 ~g~~ditV~ytIYNvG~s-~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk 107 (194)
+.++..+...+|+|..+. -|+.|+-+.+ +.|- ..-....|+||+.+.-.+++.|.
T Consensus 32 ~~~~~~~~~l~L~N~s~~~VaFKVKTT~p----~~y~-----VrP~~GiI~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 32 IESGEKKTLIVLTNVTKNIVAFKVRTTAP----EKYR-----VKPSNSSCDPGASIDIIVSPHGG 87 (152)
T ss_dssp SSSSCCCEEEEEEBCSSSCEEEEEEESCT----TTEE-----EESSEEEECTTCEEEEEEEECSS
T ss_pred CCCceEEEEEEEEcCCCCeEEEEEECCCC----Ccee-----ecCCCcEECCCCeEEEEEEecCc
Confidence 333677889999999887 7889988764 4562 24467899999999999999875
No 66
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=28.64 E-value=98 Score=22.80 Aligned_cols=42 Identities=14% Similarity=0.163 Sum_probs=23.6
Q ss_pred EEEecCCcceeeeEEecCCCCCC--CeeeecCceeeEEEEecCCCceEEEEEEEecceeeEe
Q 029361 54 DIHNQGTSTAYDVSLTDDSWPQD--KFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFH 113 (194)
Q Consensus 54 tIYNvG~s~A~dV~L~D~sfp~e--~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn 113 (194)
+..|.+. .-+|.+.++.+|.. .|. ..||+..+++| .+.|.|.
T Consensus 32 ~f~~~~~--~H~v~~~~~~~p~~~~~~~------------~~pG~t~~~tF----~~~G~y~ 75 (123)
T 1paz_A 32 TFIPVDK--GHNVESIKDMIPEGAEKFK------------SKINENYVLTV----TQPGAYL 75 (123)
T ss_dssp EEEESSS--SCCCEECTTCSCTTCCCCB------------CCTTCCEEEEC----CSCEEEE
T ss_pred EEEECCC--CeEEEEecccCCCCcccee------------cCCCCEEEEEe----CCCEEEE
Confidence 3456554 47777766555543 232 24888777666 3445543
No 67
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=27.86 E-value=1.2e+02 Score=29.95 Aligned_cols=84 Identities=14% Similarity=0.247 Sum_probs=52.0
Q ss_pred eeEEEEEEEEecC-CcceeeeE---EecCC--CCCCCeeeecCceeeEEEEecCCCceEEEEEEE-ecceeeEeeecEEE
Q 029361 47 ERISVSIDIHNQG-TSTAYDVS---LTDDS--WPQDKFDVISGNISQSWERLDAGGILSHSFELD-AKVKGMFHGSPALI 119 (194)
Q Consensus 47 ~ditV~ytIYNvG-~s~A~dV~---L~D~s--fp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~-Pk~~G~fn~t~A~V 119 (194)
..++|+.++-|.| +-+..+|. +.|+. -..-.=+|. |= .+. .|+||++.+-++.|. +....+|+-.. -
T Consensus 735 ~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~-gF--~kv-~L~pGes~~V~~~l~~~~~l~~~d~~~--~ 808 (845)
T 3abz_A 735 DKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELK-GF--EKV-HLEPGEKKTVNIDLELKDAISYFNEEL--G 808 (845)
T ss_dssp SEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEE-EE--EEE-EECTTCEEEEEEEEEHHHHHCEEETTT--T
T ss_pred CeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheec-cc--eeE-EECCCCEEEEEEEeCChHHeeEEecCC--C
Confidence 6799999999999 77766654 33421 111111111 11 133 399999999999999 89888887642 1
Q ss_pred EEEcCCC-cceeeEeecC
Q 029361 120 TFRIPTK-AALQEAYSTP 136 (194)
Q Consensus 120 tY~~se~-~~~q~a~Ss~ 136 (194)
.|..+.+ =++.+|-||.
T Consensus 809 ~~~~e~G~y~v~vG~ss~ 826 (845)
T 3abz_A 809 KWHVEAGEYLVSVGTSSD 826 (845)
T ss_dssp EEEECSEEEEEEEESSTT
T ss_pred eEEEcCCEEEEEEECCCC
Confidence 3444444 2345666654
No 68
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=26.11 E-value=1.2e+02 Score=23.03 Aligned_cols=52 Identities=17% Similarity=0.329 Sum_probs=40.9
Q ss_pred eeEEEEEEEEecCCc-ceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEec
Q 029361 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAK 107 (194)
Q Consensus 47 ~ditV~ytIYNvG~s-~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk 107 (194)
+..+-..+|+|..+. -|+.|+-+.+ +.|-+ .-....|+||+++.-.+++.|.
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p----~~y~V-----rP~~GiI~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAP----RRYCV-----RPNSGIIDPGSIVTVSVMLQPF 83 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCT----TSEEE-----ESSEEECCTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCC----ccEEE-----cCCCcEECCCCeEEEEEEECCC
Confidence 677889999999887 6889988764 45622 3456889999999988888774
No 69
>3gld_A Pilin; all-beta, cell adhesion, structural protein, isopeptid WALL, fimbrium, isopeptide bond, membrane; 2.03A {Streptococcus pyogenes serotype M1} PDB: 3b2m_A 3gle_A
Probab=24.89 E-value=2.8e+02 Score=24.05 Aligned_cols=66 Identities=14% Similarity=0.099 Sum_probs=38.8
Q ss_pred eEEEEeecccccccccceeEEEEEEEEecC---Ccceeee-------------EEecCCCCCCCeeeecCceeeEEEEec
Q 029361 30 FIVAHKKASLKRLKSGAERISVSIDIHNQG---TSTAYDV-------------SLTDDSWPQDKFDVISGNISQSWERLD 93 (194)
Q Consensus 30 ~LlvsK~i~~~~~v~g~~ditV~ytIYNvG---~s~A~dV-------------~L~D~sfp~e~Felv~G~~s~~~erI~ 93 (194)
.|-++|++.-+..-.. ++..++.++-.-. ....+++ ++.+. ....|.|-+|+. ..+.-||
T Consensus 161 ~L~V~K~VtG~~~dk~-k~F~Ftl~l~~~~~~~~g~~y~~~~~~~~G~~~~~~~~~~G--~~~tftLKhGes-i~i~gLP 236 (295)
T 3gld_A 161 TLTVKKKVSGTGGDRS-KDFNFGLTLKANQYYKASEKVMIEKTTKGGQAPVQTEASID--QLYHFTLKDGES-IKVTNLP 236 (295)
T ss_dssp EEEEEEEEESTTCCTT-CCEEEEEEECCBTTBCTTCEEEEEEECSSSCCCEEEEEETT--SCEEEEECTTCE-EEEEEEE
T ss_pred ceEEEEEEECCCcccC-CcEEEEEEEeCCccccCCceEEEEEeccCCcccceeEEecC--ceEEEEECCCCE-EEEeCCC
Confidence 5889999876654444 6677776664432 1122333 33322 134577766665 8888888
Q ss_pred CCCceE
Q 029361 94 AGGILS 99 (194)
Q Consensus 94 pg~nvs 99 (194)
.|...+
T Consensus 237 ~G~~Yt 242 (295)
T 3gld_A 237 VGVDYV 242 (295)
T ss_dssp TTCEEE
T ss_pred CCCEEE
Confidence 886543
No 70
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A
Probab=23.49 E-value=3.5e+02 Score=23.90 Aligned_cols=77 Identities=13% Similarity=0.207 Sum_probs=51.3
Q ss_pred CCceEEEEeecccccccccceeEEEEEEEEecCCcceeeeE--Eec----CCCCCCCeeeecCceeeEE---EEecCCCc
Q 029361 27 DVPFIVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVS--LTD----DSWPQDKFDVISGNISQSW---ERLDAGGI 97 (194)
Q Consensus 27 ~~a~LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s~A~dV~--L~D----~sfp~e~Felv~G~~s~~~---erI~pg~n 97 (194)
+++ |-+.=++.-+-.+.| +.|.|++.|-|.-+.+...|+ |.- --|..+.+. ..-++. +.|+||++
T Consensus 194 sG~-l~l~~sldk~~Y~pG-E~I~v~v~I~N~S~k~Vk~Ikv~L~Q~~~~~~~s~~~~k----~~Va~~e~~~~V~~gs~ 267 (393)
T 1g4m_A 194 DKP-LHLEASLDKEIYYHG-EPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYK----CPVAMEEADDTVAPSST 267 (393)
T ss_dssp SSC-EEEEEEESCSEEETT-CCEEEEEEEEECSSCCEEEEEEEEEEEEEECSSBCEEEE----EEEEEEEECCCBCTTEE
T ss_pred CCC-EEEEEEECCceEcCC-CEEEEEEEEEcCCCCEEeEEEEEEEEEEEEEEecCCceE----EEEEEEecCCcCCCCCE
Confidence 444 555555666778889 999999999999877766543 443 224443332 111222 36999999
Q ss_pred eEEEEEEEecce
Q 029361 98 LSHSFELDAKVK 109 (194)
Q Consensus 98 vsH~vvv~Pk~~ 109 (194)
.++++.|.|...
T Consensus 268 ~~~~~~L~P~l~ 279 (393)
T 1g4m_A 268 FCKVYTLTPFLA 279 (393)
T ss_dssp EEEEEEECCCGG
T ss_pred EeeEEEEcCCCC
Confidence 999999987654
No 71
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=22.86 E-value=63 Score=23.29 Aligned_cols=47 Identities=15% Similarity=0.194 Sum_probs=31.4
Q ss_pred cceeeeEEec-CCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEeccee
Q 029361 61 STAYDVSLTD-DSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKG 110 (194)
Q Consensus 61 s~A~dV~L~D-~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G 110 (194)
.....|++-| +.+..++| =|......+.|.+|....+-+.|.|..+|
T Consensus 87 ~~~L~~~V~d~d~~~~~~~---lG~~~i~l~~l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 87 QRELQLSVLSAESLRENFF---LGGITLPLKDFNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp TCEEEEEEEECCSSSCCEE---EEEEEEEGGGSCTTSCEEEEEECBC----
T ss_pred cCEEEEEEEECCCCCCCcE---EEEEEEEhhhccCCCCcceeEECCCccCC
Confidence 3577788877 55555543 36788888888888888888888776654
No 72
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=22.59 E-value=1.8e+02 Score=20.57 Aligned_cols=61 Identities=20% Similarity=0.190 Sum_probs=39.1
Q ss_pred ccccccceeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 40 KRLKSGAERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 40 ~~~v~g~~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
+...+| +...++++-.+.|. ....|++.+++ | ..... .+....+=++.+.-+|...|.|..
T Consensus 22 ~~~~~g-~~~~F~V~~~daG~-~~l~v~i~~~~----------g-~~~~~-~v~d~~dGty~v~Y~p~~~G~y~i 82 (113)
T 2dia_A 22 EHGKVG-EAGLLSVDCSEAGP-GALGLEAVSDS----------G-TKAEV-SIQNNKDGTYAVTYVPLTAGMYTL 82 (113)
T ss_dssp TCEETT-CCCCEEEEESSCCS-CCEEEEEEETT----------T-EECEE-EEEECTTSEEEEEEECSSCEEEEE
T ss_pred CCeecC-CCEEEEEEECCCCC-ccEEEEEECCC----------C-CEeeE-EEEECCCCEEEEEEEeCCCccEEE
Confidence 334677 88888888888877 45777777632 1 11222 233344557888888888888764
No 73
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum}
Probab=22.15 E-value=4.3e+02 Score=23.68 Aligned_cols=77 Identities=16% Similarity=0.229 Sum_probs=49.9
Q ss_pred EEEEeecccccccccceeEEEEEEEEecCCcceeeeEE--ec---C-CCCCCCeeeecCceeeEEEEecCCCceEEEEEE
Q 029361 31 IVAHKKASLKRLKSGAERISVSIDIHNQGTSTAYDVSL--TD---D-SWPQDKFDVISGNISQSWERLDAGGILSHSFEL 104 (194)
Q Consensus 31 LlvsK~i~~~~~v~g~~ditV~ytIYNvG~s~A~dV~L--~D---~-sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv 104 (194)
|-+.=++.-+-.+.| +.|.|+..|-|.-+.+...|++ .- - -|....+.-+=- ...+-+-|+||++.+.++.|
T Consensus 194 l~l~vsLdK~~Y~pG-E~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~~~v~l~s~~~~k~~Va-~~e~~e~V~pgst~~k~~~L 271 (392)
T 1suj_A 194 LHLEASLDKEIYYHG-EPINVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVC-AEETNDTVAANSTLSKTFSV 271 (392)
T ss_dssp EEEEEEESCSEEETT-CCEEEEEEEEECSSSEEEEEEEEEEEEEEECSSSCCEEEEEEE-EEECCCCBCTTEEEEEEEEE
T ss_pred EEEEEEeCCccccCC-CEEEEEEEEECCCCCcEeEEEEEEEEEEEEEEecCCcEEEEEE-EEecCCCcCCCCEEEEEEEE
Confidence 333444556677888 9999999999999998776543 22 1 133343321100 01123468999999999999
Q ss_pred Eecce
Q 029361 105 DAKVK 109 (194)
Q Consensus 105 ~Pk~~ 109 (194)
+|...
T Consensus 272 ~P~l~ 276 (392)
T 1suj_A 272 TPMLA 276 (392)
T ss_dssp CCCGG
T ss_pred ecccc
Confidence 97766
No 74
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=21.86 E-value=1.5e+02 Score=30.95 Aligned_cols=77 Identities=10% Similarity=0.185 Sum_probs=54.3
Q ss_pred eeEEEEEEEEecCC----cceeeeEEecCCCCC--------------------CCeeeecCceeeEEEEecCCCceEEEE
Q 029361 47 ERISVSIDIHNQGT----STAYDVSLTDDSWPQ--------------------DKFDVISGNISQSWERLDAGGILSHSF 102 (194)
Q Consensus 47 ~ditV~ytIYNvG~----s~A~dV~L~D~sfp~--------------------e~Felv~G~~s~~~erI~pg~nvsH~v 102 (194)
..+.+...+-+.|. ....+..|.|..+|+ +.+|+-++.+-.=+|+|++++..+.+|
T Consensus 1398 ~~~~~~v~~~~~~~~~~~~~~s~maivdv~LpsGfe~~~~~l~~l~~~~~~~~~~~E~~~~~v~~Y~d~~~~~~~~~~~~ 1477 (1676)
T 3cu7_A 1398 DYKRIVACASYKPSREESSSGSSHAVMDISLPTGISANEEDLKALVEGVDQLFTDYQIKDGHVILQLNSIPSSDFLCVRF 1477 (1676)
T ss_dssp -CCEEEEEEEECCCTTCCSSCCCSEEEEEECCTTCEECHHHHHHHHSSTTCSCSBCCEETTEEEEEESCCCSSSCEEEEE
T ss_pred cEEEEEEEEEEcCccccccCCCCcEEEEEecCcCCccCHHHHHHHhhccccceEEEEecCCEEEEEecccCCCCCEEEEE
Confidence 66777777777774 445666666653332 457787788888999999998899999
Q ss_pred EEEecceeeEeeecEEEEEEc
Q 029361 103 ELDAKVKGMFHGSPALITFRI 123 (194)
Q Consensus 103 vv~Pk~~G~fn~t~A~VtY~~ 123 (194)
.++....|.|.-.+...=|.-
T Consensus 1478 ~~~~~~~v~~~~Pa~v~vydy 1498 (1676)
T 3cu7_A 1478 RIFELFEVGFLSPATFTVYEY 1498 (1676)
T ss_dssp EEECSSCCSSCCCEEEEEEET
T ss_pred EEEEEeEeccccceEEEEEec
Confidence 999999998754443444443
No 75
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=21.62 E-value=2.5e+02 Score=21.90 Aligned_cols=78 Identities=12% Similarity=0.163 Sum_probs=39.3
Q ss_pred eeEEEEEEEEecCCcceeeeEEecCCCCCCCeeeec----CceeeEEEEecCCCceEEEEEEEecc-eeeEeeecEEEEE
Q 029361 47 ERISVSIDIHNQGTSTAYDVSLTDDSWPQDKFDVIS----GNISQSWERLDAGGILSHSFELDAKV-KGMFHGSPALITF 121 (194)
Q Consensus 47 ~ditV~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~----G~~s~~~erI~pg~nvsH~vvv~Pk~-~G~fn~t~A~VtY 121 (194)
..++|.-+.- .+..-..|++..|+ +.++ +.-+..|..+++| +|++.++... .|.-.- ++.++.
T Consensus 17 ~~vtv~~~As--~d~~V~~Ve~~~dg------~~v~~~t~~~ys~~~~~~~~G---~htlta~A~D~aGn~s~-s~~v~v 84 (190)
T 3pdd_A 17 KDINISATVK--SKTPVSKVEFYNGD------TLISSDTTAPYTAKITGAAVG---AYNLKAVAVLSDGRRIE-SPVTPV 84 (190)
T ss_dssp SCEEEEEEEC--CSSCEEEEEEEETT------EEEEEECSSSEEEEECSCCSE---EEEEEEEEEETTSCEEE-CCCEEE
T ss_pred CeEEEEEEEe--CCCCEEEEEEEECC------EEEccccCCceEEEeccCCCc---cEEEEEEEEECCCCEee-ecceeE
Confidence 5666666554 23344555555442 1111 2236778876666 7999999664 455443 222333
Q ss_pred EcCCCcceeeEeecC
Q 029361 122 RIPTKAALQEAYSTP 136 (194)
Q Consensus 122 ~~se~~~~q~a~Ss~ 136 (194)
...+...+.+.++++
T Consensus 85 tV~~~~~Ptv~itsP 99 (190)
T 3pdd_A 85 LVKVIVKPTVKLTAP 99 (190)
T ss_dssp EEECCCCCEEEEEEC
T ss_pred EeccCCCCceeecCC
Confidence 333222234455443
No 76
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=21.58 E-value=2.4e+02 Score=20.52 Aligned_cols=48 Identities=15% Similarity=0.309 Sum_probs=38.9
Q ss_pred EEEEEEEecCCc-ceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEe
Q 029361 50 SVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDA 106 (194)
Q Consensus 50 tV~ytIYNvG~s-~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~P 106 (194)
....+|.|..+. -|+.|+-+++ +.|- ..-....|+||+.++-.+...|
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p----~~y~-----VrP~~G~I~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNN----NEYR-----IAPVFGFVDPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCS----SSEE-----EECSEEEECTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCC----CceE-----EcCCceEECCCCeEEEEEEeCC
Confidence 578999999887 7999998875 5562 3456788999999998888886
No 77
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=21.28 E-value=20 Score=25.54 Aligned_cols=60 Identities=17% Similarity=0.221 Sum_probs=40.4
Q ss_pred EEEEEEecCCcceeeeEEec-CCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEee
Q 029361 51 VSIDIHNQGTSTAYDVSLTD-DSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHG 114 (194)
Q Consensus 51 V~ytIYNvG~s~A~dV~L~D-~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~ 114 (194)
+.+.+.+........+++-| +.+..++| =|......+.|..+. ..|-+.+.++..|.+.-
T Consensus 72 f~f~~~~~~~~~~l~i~v~d~d~~~~~~~---iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~~~~ 132 (137)
T 3rdl_A 72 FTFKLKPSDKDRRLSVEIWDWDRTTRNDF---MGSLSFGVSELMKMP-ASGWYKLLNQEEGEYYN 132 (137)
T ss_dssp EEEECCGGGGGCEEEEEEEECCSSSCCEE---EEEEEEEHHHHHHSC-EEEEEECBCHHHHTTCC
T ss_pred EEEEcCchhcCCEEEEEEEECCCCCCCce---EEEEEEeHHHhccCc-cCceEECcCcccccccc
Confidence 34444443233467888888 55655554 377888888887666 88889898888887654
No 78
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=20.67 E-value=1.7e+02 Score=20.14 Aligned_cols=61 Identities=11% Similarity=0.191 Sum_probs=42.9
Q ss_pred EEEEEEecCCcceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEeee
Q 029361 51 VSIDIHNQGTSTAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGS 115 (194)
Q Consensus 51 V~ytIYNvG~s~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t 115 (194)
+.+.+.+ .+.....+++-|...-.++| =|......+.|..|....+.+.+.+...|...+.
T Consensus 60 f~f~v~~-~~~~~l~i~V~d~d~~~~~~---iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~ 120 (126)
T 1rlw_A 60 FEFILDP-NQENVLEITLMDANYVMDET---LGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMS 120 (126)
T ss_dssp EEEEECT-TSCCEEEEEEEECCSSCCEE---EEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEE
T ss_pred EEEEecC-CCCCEEEEEEEECCCCCCce---eEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEE
Confidence 3444433 34567888988843323433 4788888899999999999999998777776654
No 79
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=20.27 E-value=4.9e+02 Score=24.00 Aligned_cols=69 Identities=7% Similarity=0.135 Sum_probs=43.0
Q ss_pred eeEEEEEEEEecCCc-ceeeeEEecCCCCCCCeeeecCceeeEEEEecCCCceEEEEEEEecceeeEeeecEEEEEEc
Q 029361 47 ERISVSIDIHNQGTS-TAYDVSLTDDSWPQDKFDVISGNISQSWERLDAGGILSHSFELDAKVKGMFHGSPALITFRI 123 (194)
Q Consensus 47 ~ditV~ytIYNvG~s-~A~dV~L~D~sfp~e~Felv~G~~s~~~erI~pg~nvsH~vvv~Pk~~G~fn~t~A~VtY~~ 123 (194)
...+++-++-|+|.. .-|.+++.- ++..++.-- ..++.-=..|+..+.+++++.+..|.|.|.. ++...
T Consensus 537 ~~~t~~rtvtnvg~~~~ty~~~v~~----p~gv~v~V~--P~~l~f~~~~~~~~~~vt~~~~~~~~~~~g~--l~w~d 606 (621)
T 3vta_A 537 FNQYFNRTLTSVAPQASTYRAMISA----PQGLTISVN--PNVLSFNGLGDRKSFTLTVRGSIKGFVVSAS--LVWSD 606 (621)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEC----CSSEEEEEE--SSEEEECSTTCEEEEEEEEEECCCSSEEEEE--EEEEC
T ss_pred eEEEEEEEEEccCCCCeEEEEEEEC----CCCcEEEEe--cCEEEEcCCCcEEEEEEEEEecCCCceEEEE--EEEEc
Confidence 456788899999987 457777763 233322100 0011111568888889999888888877644 56654
Done!