Your job contains 1 sequence.
>029362
MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI
DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF
LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
GIYVSEKSTILGEE
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 029362
(194 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2206965 - symbol:AT1G33120 species:3702 "Arabi... 846 1.7e-84 1
TAIR|locus:2196646 - symbol:PGY2 "PIGGYBACK2" species:370... 846 1.7e-84 1
TAIR|locus:2127661 - symbol:AT4G10450 species:3702 "Arabi... 832 5.0e-83 1
MGI|MGI:1298373 - symbol:Rpl9 "ribosomal protein L9" spec... 564 1.3e-54 1
UNIPROTKB|Q3SYR7 - symbol:RPL9 "60S ribosomal protein L9"... 563 1.6e-54 1
UNIPROTKB|E2R149 - symbol:RPL9 "Uncharacterized protein" ... 562 2.1e-54 1
UNIPROTKB|P32969 - symbol:RPL9 "60S ribosomal protein L9"... 562 2.1e-54 1
UNIPROTKB|I3LP78 - symbol:RPL9 "Uncharacterized protein" ... 562 2.1e-54 1
RGD|62049 - symbol:Rpl9 "ribosomal protein L9" species:10... 562 2.1e-54 1
ZFIN|ZDB-GENE-030131-8646 - symbol:rpl9 "ribosomal protei... 558 5.5e-54 1
FB|FBgn0015756 - symbol:RpL9 "Ribosomal protein L9" speci... 553 1.9e-53 1
UNIPROTKB|G3MYL1 - symbol:Bt.105281 "Uncharacterized prot... 550 3.8e-53 1
UNIPROTKB|E1BUZ8 - symbol:RPL9 "Uncharacterized protein" ... 546 1.0e-52 1
UNIPROTKB|G3N0T8 - symbol:G3N0T8 "Uncharacterized protein... 546 1.0e-52 1
UNIPROTKB|G3N2H8 - symbol:G3N2H8 "Uncharacterized protein... 545 1.3e-52 1
UNIPROTKB|G3MXR3 - symbol:G3MXR3 "Uncharacterized protein... 542 2.7e-52 1
UNIPROTKB|D6RAN4 - symbol:RPL9 "60S ribosomal protein L9"... 538 7.2e-52 1
RGD|1561789 - symbol:RGD1561789 "similar to 60S ribosomal... 536 1.2e-51 1
DICTYBASE|DDB_G0278959 - symbol:rpl9 "60S ribosomal prote... 528 8.3e-51 1
UNIPROTKB|F1NS91 - symbol:RPL9 "Uncharacterized protein" ... 527 1.1e-50 1
UNIPROTKB|F6PWD5 - symbol:F6PWD5 "Uncharacterized protein... 527 1.1e-50 1
RGD|1561928 - symbol:RGD1561928 "similar to ribosomal pro... 526 1.3e-50 1
CGD|CAL0003957 - symbol:RPL9B species:5476 "Candida albic... 515 2.0e-49 1
WB|WBGene00004420 - symbol:rpl-9 species:6239 "Caenorhabd... 515 2.0e-49 1
RGD|1559566 - symbol:RGD1559566 "similar to 60S ribosomal... 510 6.7e-49 1
UNIPROTKB|H0Y9V9 - symbol:RPL9 "60S ribosomal protein L9"... 507 1.4e-48 1
ASPGD|ASPL0000053695 - symbol:AN9465 species:162425 "Emer... 489 1.1e-46 1
SGD|S000005011 - symbol:RPL9B "Ribosomal 60S subunit prot... 488 1.4e-46 1
SGD|S000003115 - symbol:RPL9A "Ribosomal 60S subunit prot... 486 2.3e-46 1
GENEDB_PFALCIPARUM|PF13_0129 - symbol:PF13_0129 "ribosoma... 485 3.0e-46 1
UNIPROTKB|Q8IE85 - symbol:PF13_0129 "60S ribosomal protei... 485 3.0e-46 1
UNIPROTKB|J9P1E5 - symbol:LOC100855666 "Uncharacterized p... 482 6.2e-46 1
POMBASE|SPCC613.06 - symbol:rpl902 "60S ribosomal protein... 482 6.2e-46 1
UNIPROTKB|J9NVY8 - symbol:J9NVY8 "Uncharacterized protein... 480 1.0e-45 1
POMBASE|SPAC4G9.16c - symbol:rpl901 "60S ribosomal protei... 475 3.4e-45 1
UNIPROTKB|F1LX84 - symbol:F1LX84 "Uncharacterized protein... 475 3.4e-45 1
UNIPROTKB|E7ESE0 - symbol:RPL9 "60S ribosomal protein L9"... 467 2.4e-44 1
UNIPROTKB|F1M2X8 - symbol:F1M2X8 "Uncharacterized protein... 456 3.5e-43 1
UNIPROTKB|D3ZZQ7 - symbol:D3ZZQ7 "Uncharacterized protein... 436 4.6e-41 1
UNIPROTKB|G3MWV9 - symbol:G3MWV9 "Uncharacterized protein... 302 7.3e-27 1
UNIPROTKB|H0Y9R4 - symbol:RPL9 "60S ribosomal protein L9"... 201 3.7e-16 1
UNIPROTKB|F1M309 - symbol:F1M309 "Uncharacterized protein... 178 1.0e-13 1
RGD|1585598 - symbol:LOC683597 "similar to ribosomal prot... 176 1.6e-13 1
TIGR_CMR|GSU_2842 - symbol:GSU_2842 "ribosomal protein L6... 126 1.8e-07 1
TIGR_CMR|SPO_0500 - symbol:SPO_0500 "ribosomal protein L6... 114 1.6e-05 1
TIGR_CMR|CHY_2294 - symbol:CHY_2294 "ribosomal protein L6... 109 9.7e-05 1
SGD|S000001190 - symbol:MRPL6 "Mitochondrial ribosomal pr... 111 0.00010 1
UNIPROTKB|P0AG55 - symbol:rplF "50S ribosomal subunit pro... 104 0.00040 1
UNIPROTKB|Q9KNZ9 - symbol:rplF "50S ribosomal protein L6"... 102 0.00072 1
TIGR_CMR|VC_2581 - symbol:VC_2581 "ribosomal protein L6" ... 102 0.00072 1
>TAIR|locus:2206965 [details] [associations]
symbol:AT1G33120 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005774
GO:GO:0005730 GO:GO:0006412 GO:GO:0009941 GO:GO:0003735
GO:GO:0019843 GO:GO:0022625 GO:GO:0009955 KO:K02940 EMBL:AC021045
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
EMBL:X91958 EMBL:AF324688 EMBL:AF326873 EMBL:AF339694 EMBL:AF375419
EMBL:AY039593 EMBL:AY054156 EMBL:AY058051 EMBL:AY072446
EMBL:AY128910 EMBL:Z17727 EMBL:Z17728 IPI:IPI00545250 PIR:F86455
PIR:S71255 RefSeq:NP_564417.1 RefSeq:NP_564418.1 UniGene:At.22864
UniGene:At.23014 UniGene:At.68560 ProteinModelPortal:P49209
SMR:P49209 IntAct:P49209 STRING:P49209 PaxDb:P49209 PRIDE:P49209
EnsemblPlants:AT1G33120.1 EnsemblPlants:AT1G33140.1 GeneID:840208
GeneID:840211 KEGG:ath:AT1G33120 KEGG:ath:AT1G33140 GeneFarm:416
GeneFarm:420 TAIR:At1g33120 TAIR:At1g33140 HOGENOM:HOG000039905
InParanoid:P49209 OMA:RDTRIFQ PhylomeDB:P49209
ProtClustDB:CLSN2685696 Genevestigator:P49209 GermOnline:AT1G33120
Uniprot:P49209
Length = 194
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 162/194 (83%), Positives = 181/194 (93%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILSSETMDIPD V +K++AKVIEVEGPRGKL RDFKHLNLDF L+ D ETGK+KLKI
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG + K+IEIRNF
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEKKVRKV+MLDGVT++RS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 181 GIYVSEKSTILGEE 194
GIYVSEKS I+ EE
Sbjct: 181 GIYVSEKSKIVEEE 194
>TAIR|locus:2196646 [details] [associations]
symbol:PGY2 "PIGGYBACK2" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009955 "adaxial/abaxial pattern
specification" evidence=IGI] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005730 GO:GO:0006412 GO:GO:0009941
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 GO:GO:0009955 KO:K02940
EMBL:AC021045 eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 EMBL:X91958 EMBL:AF324688 EMBL:AF326873
EMBL:AF339694 EMBL:AF375419 EMBL:AY039593 EMBL:AY054156
EMBL:AY058051 EMBL:AY072446 EMBL:AY128910 EMBL:Z17727 EMBL:Z17728
IPI:IPI00545250 PIR:F86455 PIR:S71255 RefSeq:NP_564417.1
RefSeq:NP_564418.1 UniGene:At.22864 UniGene:At.23014
UniGene:At.68560 ProteinModelPortal:P49209 SMR:P49209 IntAct:P49209
STRING:P49209 PaxDb:P49209 PRIDE:P49209 EnsemblPlants:AT1G33120.1
EnsemblPlants:AT1G33140.1 GeneID:840208 GeneID:840211
KEGG:ath:AT1G33120 KEGG:ath:AT1G33140 GeneFarm:416 GeneFarm:420
TAIR:At1g33120 TAIR:At1g33140 HOGENOM:HOG000039905
InParanoid:P49209 OMA:RDTRIFQ PhylomeDB:P49209
ProtClustDB:CLSN2685696 Genevestigator:P49209 GermOnline:AT1G33120
Uniprot:P49209
Length = 194
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 162/194 (83%), Positives = 181/194 (93%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILSSETMDIPD V +K++AKVIEVEGPRGKL RDFKHLNLDF L+ D ETGK+KLKI
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D+WFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASIG + K+IEIRNF
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEKKVRKV+MLDGVT++RS+KVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 181 GIYVSEKSTILGEE 194
GIYVSEKS I+ EE
Sbjct: 181 GIYVSEKSKIVEEE 194
>TAIR|locus:2127661 [details] [associations]
symbol:AT4G10450 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL161517 EMBL:AL049524 GO:GO:0022625 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 ProtClustDB:CLSN2685696 EMBL:AY065259
EMBL:AY117346 EMBL:AY086090 IPI:IPI00517389 PIR:T04180
RefSeq:NP_192783.1 UniGene:At.24000 ProteinModelPortal:Q9SZX9
SMR:Q9SZX9 STRING:Q9SZX9 PaxDb:Q9SZX9 PRIDE:Q9SZX9
EnsemblPlants:AT4G10450.1 GeneID:826637 KEGG:ath:AT4G10450
GeneFarm:419 TAIR:At4g10450 InParanoid:Q9SZX9 OMA:AVRTVCS
PhylomeDB:Q9SZX9 Genevestigator:Q9SZX9 GermOnline:AT4G10450
Uniprot:Q9SZX9
Length = 194
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 159/194 (81%), Positives = 178/194 (91%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILSSETMDIPDGV +K+NAKVIEVEGPRGKL+RDFKHLNLDF L+ D+ TGKR+LKI
Sbjct: 1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D+WFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI NNK+IEIRNF
Sbjct: 61 DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEKKVRKV+MLDGV ++RS+KVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 181 GIYVSEKSTILGEE 194
GIYVSEK I EE
Sbjct: 181 GIYVSEKGKIAVEE 194
>MGI|MGI:1298373 [details] [associations]
symbol:Rpl9 "ribosomal protein L9" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IC] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IC]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 MGI:MGI:1298373 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS CTD:6133 HOVERGEN:HBG000942
OrthoDB:EOG4T4CWJ EMBL:AF260271 EMBL:AK012331 EMBL:AK012445
EMBL:AK017388 EMBL:AK017427 EMBL:AK084278 EMBL:BC013165
EMBL:BC081435 EMBL:BC083166 EMBL:BC083329 EMBL:U17332 EMBL:U17331
IPI:IPI00122413 RefSeq:NP_035422.1 UniGene:Mm.300271
UniGene:Mm.383918 UniGene:Mm.422908 ProteinModelPortal:P51410
SMR:P51410 STRING:P51410 PhosphoSite:P51410 PaxDb:P51410
PRIDE:P51410 Ensembl:ENSMUST00000057885 Ensembl:ENSMUST00000120094
GeneID:20005 KEGG:mmu:20005 InParanoid:P51410 NextBio:297507
Bgee:P51410 CleanEx:MM_RPL9 Genevestigator:P51410
GermOnline:ENSMUSG00000071269 Uniprot:P51410
Length = 192
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 110/190 (57%), Positives = 140/190 (73%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V++ + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>UNIPROTKB|Q3SYR7 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS GeneTree:ENSGT00390000015224
EMBL:AY911321 EMBL:BC103427 IPI:IPI00686559 RefSeq:NP_001019640.2
UniGene:Bt.48917 ProteinModelPortal:Q3SYR7 SMR:Q3SYR7 STRING:Q3SYR7
PRIDE:Q3SYR7 Ensembl:ENSBTAT00000019298 GeneID:282884
KEGG:bta:282884 CTD:6133 HOVERGEN:HBG000942 InParanoid:Q3SYR7
OrthoDB:EOG4T4CWJ NextBio:20806412 Uniprot:Q3SYR7
Length = 192
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 110/190 (57%), Positives = 139/190 (73%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>UNIPROTKB|E2R149 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 EMBL:AAEX03002535
RefSeq:XP_003434445.1 RefSeq:XP_536256.1 ProteinModelPortal:E2R149
SMR:E2R149 PRIDE:E2R149 Ensembl:ENSCAFT00000008062 GeneID:479109
KEGG:cfa:479109 NextBio:20854340 Uniprot:E2R149
Length = 192
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 110/190 (57%), Positives = 139/190 (73%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>UNIPROTKB|P32969 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005840 "ribosome" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184 GO:GO:0006413
GO:GO:0003723 GO:GO:0003735 GO:GO:0019843 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 KO:K02940 eggNOG:COG0097 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:AVRTVCS
CTD:6133 HOVERGEN:HBG000942 OrthoDB:EOG4T4CWJ EMBL:D14531
EMBL:U09953 EMBL:U09954 EMBL:U21138 EMBL:AB062431 EMBL:BC000483
EMBL:BC004156 EMBL:BC004206 EMBL:BC007967 EMBL:BC012149
EMBL:BC031906 EMBL:BC066318 EMBL:BC070214 EMBL:AB007169
IPI:IPI00031691 PIR:S65792 RefSeq:NP_000652.2 RefSeq:NP_001020092.1
UniGene:Hs.412370 UniGene:Hs.513083 UniGene:Hs.730597
UniGene:Hs.741045 PDB:2CQL PDBsum:2CQL ProteinModelPortal:P32969
SMR:P32969 IntAct:P32969 MINT:MINT-5000985 STRING:P32969
PhosphoSite:P32969 DMDM:417677 SWISS-2DPAGE:P32969 PaxDb:P32969
PeptideAtlas:P32969 PRIDE:P32969 DNASU:6133 Ensembl:ENST00000295955
Ensembl:ENST00000449470 GeneID:6133 KEGG:hsa:6133 UCSC:uc003gub.3
HGNC:HGNC:10369 HPA:HPA003372 MIM:603686 neXtProt:NX_P32969
PharmGKB:PA34769 InParanoid:P32969 PhylomeDB:P32969
EvolutionaryTrace:P32969 GenomeRNAi:6133 NextBio:23821
ArrayExpress:P32969 Bgee:P32969 CleanEx:HS_RPL9
Genevestigator:P32969 GermOnline:ENSG00000163682
GermOnline:ENSG00000169653 GermOnline:ENSG00000182754
GermOnline:ENSG00000185078 Uniprot:P32969
Length = 192
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 110/190 (57%), Positives = 139/190 (73%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>UNIPROTKB|I3LP78 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 OMA:AVRTVCS GeneTree:ENSGT00390000015224 CTD:6133
EMBL:FP312767 RefSeq:NP_001230410.1 UniGene:Ssc.26752
ProteinModelPortal:I3LP78 SMR:I3LP78 PRIDE:I3LP78
Ensembl:ENSSSCT00000026428 GeneID:100627537 KEGG:ssc:100627537
Uniprot:I3LP78
Length = 192
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 110/190 (57%), Positives = 139/190 (73%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>RGD|62049 [details] [associations]
symbol:Rpl9 "ribosomal protein L9" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:62049 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
KO:K02940 eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 HOVERGEN:HBG000942
OrthoDB:EOG4T4CWJ EMBL:X51706 EMBL:BC086561 IPI:IPI00515778
PIR:JH0222 RefSeq:NP_001007599.3 RefSeq:XP_002725578.1
RefSeq:XP_002729193.1 RefSeq:XP_003748822.1 RefSeq:XP_003753735.1
UniGene:Rn.107914 UniGene:Rn.201359 ProteinModelPortal:P17077
SMR:P17077 IntAct:P17077 STRING:P17077 PhosphoSite:P17077
PRIDE:P17077 Ensembl:ENSRNOT00000038927 Ensembl:ENSRNOT00000042201
GeneID:100360449 GeneID:100364457 GeneID:29257 KEGG:rno:100360449
KEGG:rno:100364457 KEGG:rno:29257 UCSC:RGD:62049 InParanoid:P17077
NextBio:608568 Genevestigator:P17077 GermOnline:ENSRNOG00000026716
GermOnline:ENSRNOG00000030476 Uniprot:P17077
Length = 192
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 110/190 (57%), Positives = 139/190 (73%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>ZFIN|ZDB-GENE-030131-8646 [details] [associations]
symbol:rpl9 "ribosomal protein L9" species:7955
"Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 ZFIN:ZDB-GENE-030131-8646
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 GeneTree:ENSGT00390000015224 CTD:6133
HOVERGEN:HBG000942 EMBL:CR759875 EMBL:AY648736 IPI:IPI00497811
RefSeq:NP_001003861.1 UniGene:Dr.29079 SMR:Q6DRM3 STRING:Q6DRM3
Ensembl:ENSDART00000054340 GeneID:336702 KEGG:dre:336702
InParanoid:Q6DRM3 NextBio:20811865 Uniprot:Q6DRM3
Length = 193
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 110/194 (56%), Positives = 141/194 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIPD V V + + + V+GPRG L R+F H+NL+ L+ ++ +KL++
Sbjct: 1 MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQ---KKLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I + +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDELVL+GNDIELVS SAALI Q V+ KDIRKFLD
Sbjct: 118 LGEKYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVRKKDIRKFLD 177
Query: 181 GIYVSEKSTILGEE 194
GIYVSEK T++ ++
Sbjct: 178 GIYVSEKGTVVEQQ 191
>FB|FBgn0015756 [details] [associations]
symbol:RpL9 "Ribosomal protein L9" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:AE014134
GO:GO:0051298 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 GO:GO:0000022 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 EMBL:X94613 EMBL:BT022718
PIR:JC6062 RefSeq:NP_477161.1 RefSeq:NP_723644.1 UniGene:Dm.403
ProteinModelPortal:P50882 SMR:P50882 DIP:DIP-20042N IntAct:P50882
MINT:MINT-319853 STRING:P50882 PaxDb:P50882 PRIDE:P50882
EnsemblMetazoa:FBtr0080163 EnsemblMetazoa:FBtr0080164 GeneID:34526
KEGG:dme:Dmel_CG6141 FlyBase:FBgn0015756 InParanoid:P50882
OrthoDB:EOG4WDBTZ PhylomeDB:P50882 ChiTaRS:RPL9 GenomeRNAi:34526
NextBio:788899 Bgee:P50882 GermOnline:CG6141 Uniprot:P50882
Length = 190
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 109/191 (57%), Positives = 139/191 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
M+TI S++ + IP +K + A+V+ + G RG L R FKHL LD + M D KR LK+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMY-MPD----KRTLKV 55
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
+ WFG++K AA+RT SH+ N+I GVT G++YKMR VYAHFPIN NN IEIRNF
Sbjct: 56 EKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNF 115
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V+M GVTV+ S KDEL+++GNDIE VS SAALI Q VKNKDIRKFLD
Sbjct: 116 LGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLD 175
Query: 181 GIYVSEKSTIL 191
G+YVSEK+T++
Sbjct: 176 GLYVSEKTTVV 186
>UNIPROTKB|G3MYL1 [details] [associations]
symbol:Bt.105281 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:RDTRIFQ
GeneTree:ENSGT00390000015224 EMBL:DAAA02036360
Ensembl:ENSBTAT00000057439 NextBio:20925586 Uniprot:G3MYL1
Length = 192
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 107/190 (56%), Positives = 138/190 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EI+NF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIQNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
GEK +R+V M GV S +DEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 WGEKYIRRVRMRPGVACSVSQAQRDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>UNIPROTKB|E1BUZ8 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:RDTRIFQ
GeneTree:ENSGT00390000015224 EMBL:AADN02031187 IPI:IPI00812619
Ensembl:ENSGALT00000023127 Uniprot:E1BUZ8
Length = 187
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 110/190 (57%), Positives = 138/190 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V V + + + V+GPRG L RDF H+N++ L+ + +RKL++
Sbjct: 1 MKTILSNQTVDIPEQVSVSLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---RRKLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I +N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQDNGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLD-GVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFL 179
LGEK +R+V M GV+ S KDEL+L+GNDIELVS S ALI Q VKNK IRKFL
Sbjct: 118 LGEKYIRRVRMRPVGVSCAVSQAQKDELILEGNDIELVSNSGALIQQATTVKNKKIRKFL 177
Query: 180 DGIYVSEKST 189
DGIYVSEK T
Sbjct: 178 DGIYVSEKGT 187
>UNIPROTKB|G3N0T8 [details] [associations]
symbol:G3N0T8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
OMA:EGNDIDN EMBL:DAAA02072417 Ensembl:ENSBTAT00000065194
NextBio:20901425 Uniprot:G3N0T8
Length = 192
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 107/190 (56%), Positives = 136/190 (71%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDINVKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
GEK + +V M GV S KDEL+L+GNDIELVS SA LI Q VKNKDIRKFLD
Sbjct: 118 WGEKYICRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAVLIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>UNIPROTKB|G3N2H8 [details] [associations]
symbol:G3N2H8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
EMBL:DAAA02001715 Ensembl:ENSBTAT00000066335 OMA:SHMENAM
NextBio:20868221 Uniprot:G3N2H8
Length = 191
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 110/191 (57%), Positives = 136/191 (71%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRK-LK 59
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ GK+K L+
Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLL-----GKKKRLR 55
Query: 60 IDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRN 119
+D W+G+RK A +RT SHV N+I GVT G+ YKMR VYAHFPIN I N EIRN
Sbjct: 56 VDNWWGNRKELATVRTICSHVQNMIKGVTLGFHYKMRSVYAHFPINVVIQENGSLAEIRN 115
Query: 120 FLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFL 179
FLGE +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFL
Sbjct: 116 FLGETYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFL 175
Query: 180 DGIYVSEKSTI 190
DGIYVSEK T+
Sbjct: 176 DGIYVSEKGTV 186
>UNIPROTKB|G3MXR3 [details] [associations]
symbol:G3MXR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
EMBL:DAAA02034597 PRIDE:G3MXR3 Ensembl:ENSBTAT00000064379
OMA:HFPMRVS NextBio:20925657 Uniprot:G3MXR3
Length = 192
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 106/190 (55%), Positives = 137/190 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T++IP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVNIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+ YKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFPYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
GEK + +V M GV + S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 GGEKYIHRVRMRPGVACLVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>UNIPROTKB|D6RAN4 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005737 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 HGNC:HGNC:10369 EMBL:AC021148
IPI:IPI00965303 ProteinModelPortal:D6RAN4 SMR:D6RAN4
Ensembl:ENST00000503040 ArrayExpress:D6RAN4 Bgee:D6RAN4
Uniprot:D6RAN4
Length = 182
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 108/190 (56%), Positives = 137/190 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVRMRPV-----SQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLD 172
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 173 GIYVSEKGTV 182
>RGD|1561789 [details] [associations]
symbol:RGD1561789 "similar to 60S ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:1561789 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
IPI:IPI00369278 RefSeq:XP_001074676.1 RefSeq:XP_003750128.1
RefSeq:XP_345601.1 PRIDE:D3ZMB8 Ensembl:ENSRNOT00000041351
GeneID:100910002 GeneID:366500 KEGG:rno:100910002 KEGG:rno:366500
UCSC:RGD:1561789 CTD:366500 OMA:EKGTMQQ OrthoDB:EOG4ZGPDH
NextBio:689547 Uniprot:D3ZMB8
Length = 192
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 106/190 (55%), Positives = 137/190 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T++IP+ V + + + V+GP+G L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVNIPENVDITLKGCTVIVKGPKGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+ YKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R+V M GV S KDEL+L+GNDIELVS SAA+I Q VKNKDIRKFLD
Sbjct: 118 LGEKYIRRVQMRTGVARSVSQAQKDELILEGNDIELVSNSAAVIQQATTVKNKDIRKFLD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTM 187
>DICTYBASE|DDB_G0278959 [details] [associations]
symbol:rpl9 "60S ribosomal protein L9" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 dictyBase:DDB_G0278959
GO:GO:0045335 GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AAFI02000024 GO:GO:0019843 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 HSSP:P32969
OMA:AVRTVCS RefSeq:XP_647818.2 ProteinModelPortal:Q54XI5
STRING:Q54XI5 PRIDE:Q54XI5 EnsemblProtists:DDB0231259
GeneID:8621778 KEGG:ddi:DDB_G0278959 Uniprot:Q54XI5
Length = 188
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 98/190 (51%), Positives = 138/190 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MK I SS + IP+ V V + + ++V GPRG LS+ F H ++D +L+ GK++L +
Sbjct: 1 MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLV-----GKKELTV 55
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D WFG+RK A I+T S + N+ITGVTKGY YKMRFVYAHFPIN ++ + + +EIRNF
Sbjct: 56 DLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNF 115
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
GEK VR++++LDG+T R++K KDE+VL GN +EL+S+S A I + +K KD+RKFLD
Sbjct: 116 FGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLD 175
Query: 181 GIYVSEKSTI 190
GIYVSE++ +
Sbjct: 176 GIYVSERNVL 185
>UNIPROTKB|F1NS91 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 EMBL:AADN02015873 EMBL:AADN02015874
EMBL:AADN02015875 EMBL:AADN02015876 EMBL:AADN02015877
EMBL:AADN02015878 EMBL:AADN02015879 EMBL:AADN02015880
EMBL:AADN02015886 EMBL:AADN02015881 EMBL:AADN02015882
EMBL:AADN02015883 EMBL:AADN02015884 EMBL:AADN02015885
EMBL:AADN02015867 EMBL:AADN02015868 EMBL:AADN02015869
EMBL:AADN02015870 EMBL:AADN02015871 EMBL:AADN02015872
IPI:IPI00601775 Ensembl:ENSGALT00000000206 Uniprot:F1NS91
Length = 181
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 104/179 (58%), Positives = 130/179 (72%)
Query: 12 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSA 71
IP+ V V + + + V+GPRG L RDF H+N++ L+ + +RKL++D W+G+RK A
Sbjct: 1 IPEQVSVSLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---RRKLRVDKWWGNRKELA 57
Query: 72 AIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDM 131
+RT SHV N+I GVT G+RYKMR VYAHFPIN I +N +EIRNFLGEK +R+V M
Sbjct: 58 TVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQDNGSLVEIRNFLGEKYIRRVRM 117
Query: 132 LDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 190
GV+ S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+
Sbjct: 118 RPGVSCAVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 176
>UNIPROTKB|F6PWD5 [details] [associations]
symbol:F6PWD5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
IPI:IPI00686559 EMBL:DAAA02020438 Ensembl:ENSBTAT00000023649
OMA:TINIRNF Uniprot:F6PWD5
Length = 192
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 105/189 (55%), Positives = 133/189 (70%)
Query: 2 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKID 61
KTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L +D
Sbjct: 2 KTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLHVD 58
Query: 62 AWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFL 121
W+G+RK A +RT S V N+I VT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 59 KWWGNRKELATVRTICSQVQNMIKSVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFW 118
Query: 122 GEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 181
GEK + +V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDG
Sbjct: 119 GEKYICRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDG 178
Query: 182 IYVSEKSTI 190
IYVSEK T+
Sbjct: 179 IYVSEKGTV 187
>RGD|1561928 [details] [associations]
symbol:RGD1561928 "similar to ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 RGD:1561928 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
IPI:IPI00959106 PRIDE:F1M7A9 Ensembl:ENSRNOT00000042609
Uniprot:F1M7A9
Length = 192
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 106/189 (56%), Positives = 133/189 (70%)
Query: 2 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKID 61
KTILS++T+DIP+ V + + + VEGPRG L RDF H+N++ L+ +E ++L++D
Sbjct: 2 KTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKE---KRLRVD 58
Query: 62 AWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFL 121
W+G+ K A +RT SHV N+I GVT G+ YKMR VYAHFPIN I N +EIRNFL
Sbjct: 59 KWWGNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFL 118
Query: 122 GEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 181
GEK +R+V M V S KDEL+L+GNDIELVS SAALI Q VKNKDI KFLDG
Sbjct: 119 GEKYIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDG 178
Query: 182 IYVSEKSTI 190
IYVSEK T+
Sbjct: 179 IYVSEKGTV 187
>CGD|CAL0003957 [details] [associations]
symbol:RPL9B species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0002181 "cytoplasmic translation"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
CGD:CAL0003957 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 EMBL:AACQ01000027 EMBL:AACQ01000026 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 RefSeq:XP_719935.1 RefSeq:XP_720065.1
ProteinModelPortal:Q5AEN2 STRING:Q5AEN2 GeneID:3638287
GeneID:3638348 KEGG:cal:CaO19.236 KEGG:cal:CaO19.7866
Uniprot:Q5AEN2
Length = 191
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 106/195 (54%), Positives = 142/195 (72%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MK I + + +DIP+GV V I A+V++V GPRG+L++D KH+++ F+ + + R +KI
Sbjct: 1 MKYIQTDQILDIPEGVTVDIKARVVKVTGPRGELTKDLKHIDVTFNKINN-----RAIKI 55
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASI--GNNNKAIEIR 118
G RK AA+RT S + NLITGVTKGY+YKMRFVYAHFPIN +I + +EIR
Sbjct: 56 TVHNGDRKHVAALRTVKSLIANLITGVTKGYKYKMRFVYAHFPINVNIIKKDGQDYVEIR 115
Query: 119 NFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKF 178
NFLGEK+VR+V + +GVT+ S KDEL++ GN +E VS++AA I Q C V+NKDIRKF
Sbjct: 116 NFLGEKRVREVKIHEGVTMEISSTQKDELIVSGNSLEAVSQNAADIQQICRVRNKDIRKF 175
Query: 179 LDGIYVSEKSTILGE 193
LDGIYVSE+ TI+ E
Sbjct: 176 LDGIYVSERGTIVEE 190
>WB|WBGene00004420 [details] [associations]
symbol:rpl-9 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0009408 "response to heat"
evidence=IMP] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0006412 GO:GO:0010171 GO:GO:0000003 GO:GO:0009408
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:FO080424 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS GeneTree:ENSGT00390000015224
RefSeq:NP_498660.1 ProteinModelPortal:Q95Y90 SMR:Q95Y90
DIP:DIP-26431N IntAct:Q95Y90 MINT:MINT-214155 STRING:Q95Y90
PaxDb:Q95Y90 PRIDE:Q95Y90 EnsemblMetazoa:R13A5.8.1
EnsemblMetazoa:R13A5.8.2 GeneID:176071 KEGG:cel:CELE_R13A5.8
UCSC:R13A5.8.1 CTD:176071 WormBase:R13A5.8 InParanoid:Q95Y90
NextBio:890984 Uniprot:Q95Y90
Length = 189
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 100/191 (52%), Positives = 136/191 (71%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MK I S++T+ P+GV + +++ V GPRG + +DF+HL+++ E GK L++
Sbjct: 1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEM-----ERIGKSTLRV 55
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
WFG RK AAIRT SH+ N+I GVT G+RYKMR VYAHFPIN ++ + N+ +EIRNF
Sbjct: 56 RKWFGVRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNF 115
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK VR+V + +GV S KDE+V++GND++ VS++AA I Q VK KDIRKFLD
Sbjct: 116 LGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLD 175
Query: 181 GIYVSEKSTIL 191
GIYVSEK+TI+
Sbjct: 176 GIYVSEKTTIV 186
>RGD|1559566 [details] [associations]
symbol:RGD1559566 "similar to 60S ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:1559566 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
OrthoDB:EOG4ZGPDH IPI:IPI00203400 RefSeq:XP_001056263.1
RefSeq:XP_003752034.1 RefSeq:XP_234521.1 Ensembl:ENSRNOT00000042622
GeneID:100911472 GeneID:314434 KEGG:rno:100911472 KEGG:rno:314434
UCSC:RGD:1559566 CTD:314434 NextBio:667677 Uniprot:D4ABC9
Length = 193
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 106/191 (55%), Positives = 132/191 (69%)
Query: 1 MKT-ILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLK 59
MKT ILS+ET+DIP+ V + + + V PRG L RDF H+N++ L+ + K++L
Sbjct: 1 MKTTILSNETVDIPENVDITLKGCTVIVRDPRGTLRRDFNHINVELSLLGKK---KKRLC 57
Query: 60 IDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRN 119
+D W+G+ K A +RT SHV N+I GVT G+ Y+MR V AHFPIN I N +EIRN
Sbjct: 58 VDKWWGNSKELATVRTICSHVQNMIKGVTLGFCYEMRSVDAHFPINVIIQENGSLVEIRN 117
Query: 120 FLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFL 179
FLGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFL
Sbjct: 118 FLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFL 177
Query: 180 DGIYVSEKSTI 190
DGIYVSEK T+
Sbjct: 178 DGIYVSEKGTV 188
>UNIPROTKB|H0Y9V9 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005737 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HGNC:HGNC:10369 EMBL:AC021148
Ensembl:ENST00000508595 Uniprot:H0Y9V9
Length = 189
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 100/175 (57%), Positives = 125/175 (71%)
Query: 16 VKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSAAIRT 75
V + + + + V+GPRG L RDF H+N++ L+ + K++L++D W+G+RK A +RT
Sbjct: 13 VDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRVDKWWGNRKELATVRT 69
Query: 76 ALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGV 135
SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNFLGEK +R+V M GV
Sbjct: 70 ICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGV 129
Query: 136 TVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTI 190
S KDEL+L+GNDIELVS SAALI Q VKNKDIRKFLDGIYVSEK T+
Sbjct: 130 ACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 184
>ASPGD|ASPL0000053695 [details] [associations]
symbol:AN9465 species:162425 "Emericella nidulans"
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:BN001308
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS EMBL:AACD01000192
RefSeq:XP_868847.1 ProteinModelPortal:Q5AQG5 STRING:Q5AQG5
EnsemblFungi:CADANIAT00001236 GeneID:3684062 KEGG:ani:AN9465.2
Uniprot:Q5AQG5
Length = 192
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 105/197 (53%), Positives = 133/197 (67%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
M+ I S ET+ IP+ VKV I ++V+ VEGPRGKL++D H+ + F K + I
Sbjct: 1 MRYIHSEETLPIPENVKVHIRSRVVTVEGPRGKLTKDLSHIAVTFG-----RPKKDVISI 55
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKA----IE 116
+ GSRK A +RT + + NLI GVTKG++YKMR+VYAHFPIN +I N + +E
Sbjct: 56 EMHHGSRKGVATLRTVRTLINNLIIGVTKGFKYKMRYVYAHFPINVNIEKNAETGQYDVE 115
Query: 117 IRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIR 176
IRNFLGEK VR+V GV +I S VKDEL L GN +E VS+SAA I Q C V+NKDIR
Sbjct: 116 IRNFLGEKYVRRVVCQPGVEIIASPNVKDELQLSGNSLEAVSQSAADIQQICRVRNKDIR 175
Query: 177 KFLDGIYVSEKSTILGE 193
KFLDG+YVSEK I+ E
Sbjct: 176 KFLDGLYVSEKGNIVEE 192
>SGD|S000005011 [details] [associations]
symbol:RPL9B "Ribosomal 60S subunit protein L9B" species:4932
"Saccharomyces cerevisiae" [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 SGD:S000005011
EMBL:BK006947 GO:GO:0003735 GO:GO:0002181 EMBL:U12141 GO:GO:0019843
EMBL:X86470 EMBL:Z71343 GO:GO:0022625 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS OrthoDB:EOG4RJK9X
GeneTree:ENSGT00390000015224 EMBL:AY693129 PIR:S53915
RefSeq:NP_014332.1 ProteinModelPortal:P51401 SMR:P51401
IntAct:P51401 MINT:MINT-2732420 STRING:P51401 PaxDb:P51401
PeptideAtlas:P51401 EnsemblFungi:YNL067W GeneID:855658
KEGG:sce:YNL067W CYGD:YNL067w NextBio:979917 Genevestigator:P51401
GermOnline:YNL067W Uniprot:P51401
Length = 191
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 99/193 (51%), Positives = 137/193 (70%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MK I + + ++IP+GV V I +++++V GPRG L+++ KH+++ F + + +K+
Sbjct: 1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKV 55
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIR 118
G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+R
Sbjct: 56 AVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVR 115
Query: 119 NFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKF 178
NFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKF
Sbjct: 116 NFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKF 175
Query: 179 LDGIYVSEKSTIL 191
LDGIYVS K I+
Sbjct: 176 LDGIYVSHKGFIV 188
>SGD|S000003115 [details] [associations]
symbol:RPL9A "Ribosomal 60S subunit protein L9A" species:4932
"Saccharomyces cerevisiae" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
SGD:S000003115 EMBL:BK006941 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 EMBL:X60190 EMBL:X99960 PDB:4B6A PDBsum:4B6A PDB:3J16
PDBsum:3J16 GO:GO:0022625 RefSeq:NP_011368.3 GeneID:852730
KEGG:sce:YGL147C KO:K02940 KO:K02835 RefSeq:NP_011372.3
GeneID:852734 KEGG:sce:YGL143C Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000039905
OMA:RDTRIFQ OrthoDB:EOG4RJK9X EMBL:Z72669 PIR:S19077
ProteinModelPortal:P05738 SMR:P05738 DIP:DIP-4826N IntAct:P05738
MINT:MINT-493534 STRING:P05738 PeptideAtlas:P05738
EnsemblFungi:YGL147C CYGD:YGL147c GeneTree:ENSGT00390000015224
EvolutionaryTrace:P05738 NextBio:972123 Genevestigator:P05738
GermOnline:YGL147C Uniprot:P05738
Length = 191
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 98/192 (51%), Positives = 136/192 (70%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MK I + + +++P+GV V I +++++V GPRG L+++ KH+++ F + + +K+
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTF-----TKVNNQLIKV 55
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIR 118
G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+R
Sbjct: 56 AVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVR 115
Query: 119 NFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKF 178
NFLG+KK+R V + DGVT+ S VKDE+VL GN +E VS++AA + Q C V+NKDIRKF
Sbjct: 116 NFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKF 175
Query: 179 LDGIYVSEKSTI 190
LDGIYVS K I
Sbjct: 176 LDGIYVSHKGFI 187
>GENEDB_PFALCIPARUM|PF13_0129 [details] [associations]
symbol:PF13_0129 "ribosomal protein L6
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR000702
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0019843 EMBL:AL844509
GO:GO:0015934 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 RefSeq:XP_001349971.1
ProteinModelPortal:Q8IE85 IntAct:Q8IE85 MINT:MINT-1554718
PRIDE:Q8IE85 EnsemblProtists:PF13_0129:mRNA GeneID:814100
KEGG:pfa:PF13_0129 EuPathDB:PlasmoDB:PF3D7_1323100 OMA:EGNDIDN
ProtClustDB:PTZ00027 Uniprot:Q8IE85
Length = 190
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 102/194 (52%), Positives = 134/194 (69%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTI+S++ + IP+GVKV INA+ + V G G L R F+HL +D L K+ +K+
Sbjct: 1 MKTIVSTQKVLIPEGVKVAINARKVTVSGKYGTLRRSFRHLPIDIRL----NKLKKYIKV 56
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
WFG + A IRT +H+ N+ TGVTK + YKMR V+AHFPIN++I +NN IEIRN+
Sbjct: 57 VMWFGVPDSLACIRTVCTHLKNMFTGVTKKFLYKMRLVHAHFPINSNIVDNNTRIEIRNY 116
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK VR V L GV + +S VKDE+ + G DIE VS +AALI+Q +NKDIRKFLD
Sbjct: 117 LGEKSVRFVKALPGVVIEKSPNVKDEIYVSGADIENVSLTAALIHQSVLCRNKDIRKFLD 176
Query: 181 GIYVSEKSTILGEE 194
GIYVSE +T+ +E
Sbjct: 177 GIYVSEVTTVEKDE 190
>UNIPROTKB|Q8IE85 [details] [associations]
symbol:PF13_0129 "60S ribosomal protein L6, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0019843 EMBL:AL844509 GO:GO:0015934 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 RefSeq:XP_001349971.1
ProteinModelPortal:Q8IE85 IntAct:Q8IE85 MINT:MINT-1554718
PRIDE:Q8IE85 EnsemblProtists:PF13_0129:mRNA GeneID:814100
KEGG:pfa:PF13_0129 EuPathDB:PlasmoDB:PF3D7_1323100 OMA:EGNDIDN
ProtClustDB:PTZ00027 Uniprot:Q8IE85
Length = 190
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 102/194 (52%), Positives = 134/194 (69%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTI+S++ + IP+GVKV INA+ + V G G L R F+HL +D L K+ +K+
Sbjct: 1 MKTIVSTQKVLIPEGVKVAINARKVTVSGKYGTLRRSFRHLPIDIRL----NKLKKYIKV 56
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
WFG + A IRT +H+ N+ TGVTK + YKMR V+AHFPIN++I +NN IEIRN+
Sbjct: 57 VMWFGVPDSLACIRTVCTHLKNMFTGVTKKFLYKMRLVHAHFPINSNIVDNNTRIEIRNY 116
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK VR V L GV + +S VKDE+ + G DIE VS +AALI+Q +NKDIRKFLD
Sbjct: 117 LGEKSVRFVKALPGVVIEKSPNVKDEIYVSGADIENVSLTAALIHQSVLCRNKDIRKFLD 176
Query: 181 GIYVSEKSTILGEE 194
GIYVSE +T+ +E
Sbjct: 177 GIYVSEVTTVEKDE 190
>UNIPROTKB|J9P1E5 [details] [associations]
symbol:LOC100855666 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:AAEX03002898
RefSeq:XP_003639053.1 Ensembl:ENSCAFT00000025164 GeneID:100855666
KEGG:cfa:100855666 Uniprot:J9P1E5
Length = 191
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 102/191 (53%), Positives = 128/191 (67%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRK-LK 59
MKTILS++T+DIP+ V + + + V+GPRG L R+F H+N++ L GK+K L+
Sbjct: 1 MKTILSNKTVDIPENVDITLKGCTVIVKGPRGTLRRNFNHINIELSL-----PGKKKRLQ 55
Query: 60 IDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRN 119
D W+G+RK A I T SHV N+I G+T G+ YKMR VYAHFPIN I N +EIRN
Sbjct: 56 ADKWWGNRKELATICTICSHVQNMIKGMTLGFCYKMRSVYAHFPINVVIQENVSLVEIRN 115
Query: 120 FLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFL 179
FLGEK + +V M GV S KDEL+L+GNDIELV SAA I Q VKN+DIRK L
Sbjct: 116 FLGEKYIHRVRMRPGVACSVSQAQKDELILEGNDIELVLNSAASIQQATTVKNQDIRKIL 175
Query: 180 DGIYVSEKSTI 190
GIYVSE T+
Sbjct: 176 GGIYVSENGTV 186
>POMBASE|SPCC613.06 [details] [associations]
symbol:rpl902 "60S ribosomal protein L9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
PomBase:SPCC613.06 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022625 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:RDTRIFQ OrthoDB:EOG4RJK9X
PIR:T41472 RefSeq:NP_587694.1 ProteinModelPortal:O74905
STRING:O74905 PRIDE:O74905 EnsemblFungi:SPCC613.06.1 GeneID:2539464
KEGG:spo:SPCC613.06 NextBio:20800626 Uniprot:O74905
Length = 189
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 96/189 (50%), Positives = 132/189 (69%)
Query: 2 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKID 61
+ I ET+ IP+GV V I A+++ V+GPRG L ++ + ++++ ++ G +K
Sbjct: 3 RDIYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRVDIEL-----KKQGNT-IKFI 56
Query: 62 AWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFL 121
W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFL
Sbjct: 57 VWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFL 116
Query: 122 GEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 181
GE+ R + L GVTV S VKDE++++GN +E VS+SAA I Q C+V+NKDIRKFLDG
Sbjct: 117 GERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDG 176
Query: 182 IYVSEKSTI 190
IYVSE+ I
Sbjct: 177 IYVSERGNI 185
>UNIPROTKB|J9NVY8 [details] [associations]
symbol:J9NVY8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:AAEX03008706
Ensembl:ENSCAFT00000001006 Uniprot:J9NVY8
Length = 192
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 98/190 (51%), Positives = 129/190 (67%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MK ILS++T++IP+ V + + V+GPRG L RDF H+N++ L+ + K+++++
Sbjct: 1 MKIILSNQTVNIPENVDNTLKGCTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRIRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+ K + T SH+ N+I GVT+G+ YKM VYAHF IN I N +EIRNF
Sbjct: 58 DKWWGNTKELTTVCTMCSHIQNMIKGVTQGFCYKMTSVYAHFRINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK +R V M GV S KDEL+L+GNDIELVS SAALI Q VK+KDIRKF D
Sbjct: 118 LGEKYIRGVWMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQAITVKDKDIRKFGD 177
Query: 181 GIYVSEKSTI 190
GIYVSEK T+
Sbjct: 178 GIYVSEKGTV 187
>POMBASE|SPAC4G9.16c [details] [associations]
symbol:rpl901 "60S ribosomal protein L9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 PomBase:SPAC4G9.16c GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022625 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS PIR:T38875 RefSeq:NP_593698.1
ProteinModelPortal:Q10232 STRING:Q10232 PRIDE:Q10232
EnsemblFungi:SPAC4G9.16c.1 GeneID:2543380 KEGG:spo:SPAC4G9.16c
OrthoDB:EOG4RJK9X NextBio:20804395 Uniprot:Q10232
Length = 190
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 96/189 (50%), Positives = 129/189 (68%)
Query: 2 KTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKID 61
+ I ET+ IP GV V I A+ + V GPRG L ++ +H++++ ++ G +K
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEM-----KKQGNT-IKFI 56
Query: 62 AWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFL 121
W GSRK +A IR+ S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNFL
Sbjct: 57 VWHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFL 116
Query: 122 GEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 181
GE+ R + L GVTV S VKDE++L+GN +E VS+SAA I Q C+V+NKDIRKFLDG
Sbjct: 117 GERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDG 176
Query: 182 IYVSEKSTI 190
IYVSE+ I
Sbjct: 177 IYVSERGNI 185
>UNIPROTKB|F1LX84 [details] [associations]
symbol:F1LX84 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 IPI:IPI00189880
Ensembl:ENSRNOT00000048551 Uniprot:F1LX84
Length = 194
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 97/191 (50%), Positives = 130/191 (68%)
Query: 2 KTILSSE--TMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLK 59
+T+LS+ +++IP+ V + + + V+GPRG L RDF H++++ L+ + K++L+
Sbjct: 2 ETVLSTIRLSVNIPENVDITLKGHTVIVKGPRGTLRRDFNHISVELSLLGKK---KKRLR 58
Query: 60 IDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRN 119
+D W+G+RK A +RT S V NLI GVT G+RYK R V AHFPIN + N +EI+N
Sbjct: 59 VDKWWGNRKELATVRTICSRVQNLIKGVTLGFRYKRRSVCAHFPINVVVQENGSLVEIQN 118
Query: 120 FLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFL 179
FLGEK +R+V M V S KDEL+L+GN IELVS S ALI Q VKNKDIRKFL
Sbjct: 119 FLGEKYIRRVRMRTSVACSVSPAQKDELILEGNGIELVSNSTALIQQATTVKNKDIRKFL 178
Query: 180 DGIYVSEKSTI 190
DGIYVSEK T+
Sbjct: 179 DGIYVSEKGTV 189
>UNIPROTKB|E7ESE0 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HGNC:HGNC:10369 EMBL:AC021148 IPI:IPI00966707
ProteinModelPortal:E7ESE0 SMR:E7ESE0 Ensembl:ENST00000504470
ArrayExpress:E7ESE0 Bgee:E7ESE0 Uniprot:E7ESE0
Length = 166
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 91/166 (54%), Positives = 119/166 (71%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MKTILS++T+DIP+ V + + + + V+GPRG L RDF H+N++ L+ + K++L++
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK---KKRLRV 57
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF
Sbjct: 58 DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNF 117
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQ 166
LGEK +R+V M GV S KDEL+L+GNDIELVS SAALI Q
Sbjct: 118 LGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQ 163
>UNIPROTKB|F1M2X8 [details] [associations]
symbol:F1M2X8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 IPI:IPI00393445
Ensembl:ENSRNOT00000033203 Uniprot:F1M2X8
Length = 189
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 94/186 (50%), Positives = 126/186 (67%)
Query: 6 SSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFG 65
S +T++IP+ V + + + + V+GP G L RDF H+N++ L+ + K++L++D W+G
Sbjct: 6 SQQTVNIPENVDISLKGRTVIVKGP-GTLRRDFNHINVELSLLGKK---KKRLRVDKWWG 61
Query: 66 SRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKK 125
+ K A +RT S V N+I G+T G+ YKMR VYAHFPIN N +EI+NFL EK
Sbjct: 62 NGKELATVRTICSRVQNMIKGMTLGFHYKMRSVYAHFPINVVTQENGSLVEIQNFLDEKY 121
Query: 126 VRKVDMLDGVTVIR-SDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 184
+R+V M GV S KDEL+L+GNDIELVS SAALI VKNK+IRKFLDGIYV
Sbjct: 122 IRRVRMSTGVVAYSVSQAQKDELILEGNDIELVSNSAALIKT---VKNKNIRKFLDGIYV 178
Query: 185 SEKSTI 190
SEK T+
Sbjct: 179 SEKGTV 184
>UNIPROTKB|D3ZZQ7 [details] [associations]
symbol:D3ZZQ7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 OrthoDB:EOG4ZGPDH IPI:IPI00209078
Ensembl:ENSRNOT00000028742 Uniprot:D3ZZQ7
Length = 190
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 96/190 (50%), Positives = 124/190 (65%)
Query: 1 MKTILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
MK ILS++T+D P V + + + ++GPRG L RDF H+N++ L+ + K++L +
Sbjct: 1 MKIILSNQTVDNPKNVDITLKEHTV-IKGPRGTLRRDFNHINVELSLLGKK---KKRLCV 56
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNF 120
D G+RK A +RT+ SHV + GVT G+ Y+MR V A FPIN I N +EIRNF
Sbjct: 57 DKCGGNRKELATVRTSCSHVQTTMKGVTLGFHYEMRSV-ASFPINVVIQENWSLVEIRNF 115
Query: 121 LGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
LGEK + +V M GV S KDEL+L+GNDIELV SAAL Q VKNKDIRKFLD
Sbjct: 116 LGEKYICRVWMRTGVACSVSQAQKDELILEGNDIELVPNSAALTQQATTVKNKDIRKFLD 175
Query: 181 GIYVSEKSTI 190
GI VSEK T+
Sbjct: 176 GIRVSEKGTV 185
>UNIPROTKB|G3MWV9 [details] [associations]
symbol:G3MWV9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR020040 PIRSF:PIRSF002162
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:DAAA02053278
Ensembl:ENSBTAT00000009223 Uniprot:G3MWV9
Length = 178
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 79/189 (41%), Positives = 110/189 (58%)
Query: 3 TILSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDA 62
TILS+ T +P+ + K V+GPRG RDF H+++ F L+ + K++L++D
Sbjct: 1 TILSNWTAGVPE-ISAH-TLKGCTVKGPRGTQWRDFNHIDVAFSLLGKK---KKRLQVDK 55
Query: 63 WFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLG 122
W+ ++K + T S V N+I VT G+ YKMR V AHFPI+ +I N EI NF
Sbjct: 56 WWRNKKELVTVCTICSRVQNMIKSVTLGFCYKMRSVRAHFPIDVAIQENGSLAEI-NFGD 114
Query: 123 EKKVRKVDM-LDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDG 181
K + + M LD + + +DEL L+GN ELVS SA+ +KDIRKFLDG
Sbjct: 115 GKYIHRGQMSLDMAYSVPQAQ-EDELSLEGNHTELVSDSAS---------HKDIRKFLDG 164
Query: 182 IYVSEKSTI 190
IYVSEK T+
Sbjct: 165 IYVSEKGTV 173
>UNIPROTKB|H0Y9R4 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 HGNC:HGNC:10369 EMBL:AC021148
Ensembl:ENST00000506581 Uniprot:H0Y9R4
Length = 91
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 45/82 (54%), Positives = 53/82 (64%)
Query: 109 GNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQKC 168
GN + +R + +M+ GV S KDEL+L+GNDIELVS SAALI Q
Sbjct: 9 GNRKELATVRTICSHVQ----NMIKGVACSVSQAQKDELILEGNDIELVSNSAALIQQAT 64
Query: 169 HVKNKDIRKFLDGIYVSEKSTI 190
VKNKDIRKFLDGIYVSEK T+
Sbjct: 65 TVKNKDIRKFLDGIYVSEKGTV 86
Score = 99 (39.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 58 LKIDAWFGSRKTSAAIRTALSHVGNLITGV--TKGYRYKMRFVYAHFPINASIGNNNKAI 115
L++D W+G+RK A +RT SHV N+I GV + K + I + N+ I
Sbjct: 2 LRVDKWWGNRKELATVRTICSHVQNMIKGVACSVSQAQKDELILEGNDIEL-VSNSAALI 60
Query: 116 EIRNFLGEKKVRKVDMLDGVTVIRSDKVK 144
+ + K +RK LDG+ V V+
Sbjct: 61 QQATTVKNKDIRK--FLDGIYVSEKGTVQ 87
>UNIPROTKB|F1M309 [details] [associations]
symbol:F1M309 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
IPI:IPI00778956 Ensembl:ENSRNOT00000039259 Uniprot:F1M309
Length = 113
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 41/117 (35%), Positives = 62/117 (52%)
Query: 4 ILSSETMDIPDGVK---VKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKI 60
I ++ ++P K + + + + V+GPRG L RDF +N++ L+ GK K +
Sbjct: 4 IATTPKPNLPQNTKMSNITLKGRTVIVKGPRGTLWRDFNRINVELRLL-----GKEKSVL 58
Query: 61 DAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEI 117
G+RK +R+ + V N+I GVT G+RYK R HFPIN I N +EI
Sbjct: 59 TN--GNRKELVTVRSVCTRVQNVIKGVTLGFRYKTRSACVHFPINVVIQENGSVVEI 113
>RGD|1585598 [details] [associations]
symbol:LOC683597 "similar to ribosomal protein L9" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 RGD:1585598
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 Gene3D:3.90.930.12 PANTHER:PTHR11655
GeneTree:ENSGT00390000015224 IPI:IPI00388839
Ensembl:ENSRNOT00000030099 Uniprot:D3ZKV5
Length = 152
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 48/150 (32%), Positives = 78/150 (52%)
Query: 12 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSA 71
I VK+ NA ++ V+ RG L RDF H+N++ L+ K++L++D W + K +
Sbjct: 6 INQAVKIPENAHIVIVKDTRGTLQRDFNHINIELRLLAKR---KKQLQVDKWLKTMKLAT 62
Query: 72 AIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDM 131
A T SHV N+I V G ++ + + P N +EI NFLGEK ++ V M
Sbjct: 63 A-HTIYSHVQNMIKRVD-GLVFQDVILVSSIPQQQE---NQSLVEISNFLGEKYIQGVQM 117
Query: 132 LDGVTVIRSDKVKDELVLDGNDIELVSRSA 161
V+R +VK++ + + ++ VS A
Sbjct: 118 R--TDVVRKLQVKNKDIREVSNSVYVSEKA 145
>TIGR_CMR|GSU_2842 [details] [associations]
symbol:GSU_2842 "ribosomal protein L6" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000702
InterPro:IPR002358 InterPro:IPR019906 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525
GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903
KO:K02933 OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 TIGRFAMs:TIGR03654 HSSP:P02391 ProtClustDB:PRK05498
HAMAP:MF_01365_B PANTHER:PTHR11655:SF6 RefSeq:NP_953885.1
ProteinModelPortal:Q749A2 GeneID:2687150 KEGG:gsu:GSU2842
PATRIC:22028531 BioCyc:GSUL243231:GH27-2808-MONOMER Uniprot:Q749A2
Length = 179
Score = 126 (49.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/162 (29%), Positives = 76/162 (46%)
Query: 5 LSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWF 64
+ ++IP GVKV+ + V+ +EGP+GKLSR + + KR D
Sbjct: 4 IGKRPIEIPSGVKVEFSDSVLTIEGPKGKLSRQVMD-GVSLEITPSSIEVKRA---DDGL 59
Query: 65 GSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAI-EIRNF-LG 122
+R RT V N++ GVTKG+ + IN +G +A ++ N LG
Sbjct: 60 KARSAHGLTRTL---VNNMVVGVTKGFERALE-------ING-VGYRAEAKGDVLNLSLG 108
Query: 123 EKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALI 164
+ G+ ++ DK+ +LV+ G D ELV ++AA I
Sbjct: 109 YSHPINYALPAGI-IVEVDKMT-KLVVKGIDKELVGQTAAKI 148
>TIGR_CMR|SPO_0500 [details] [associations]
symbol:SPO_0500 "ribosomal protein L6" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR000702
InterPro:IPR002358 InterPro:IPR019906 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903
KO:K02933 OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 TIGRFAMs:TIGR03654 HSSP:P02391 ProtClustDB:PRK05498
HAMAP:MF_01365_B PANTHER:PTHR11655:SF6 RefSeq:YP_165762.1
ProteinModelPortal:Q5LW43 SMR:Q5LW43 GeneID:3195456
KEGG:sil:SPO0500 PATRIC:23374261 Uniprot:Q5LW43
Length = 177
Score = 114 (45.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/165 (27%), Positives = 76/165 (46%)
Query: 5 LSSETMDIPDGVKVKINAKVIEVEGPRGKLS---RDFKHLNLDFHLMTDEETGKRKLKID 61
+ + +++P GV ++ + IEV+GP+G S D + +D ++++ G K
Sbjct: 4 IGKKPVELPSGVSAAVSGQTIEVKGPKGARSFTATDDVTITVDGNVVSITPRGMSKRARQ 63
Query: 62 AWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFL 121
W G +T A NL+ GVT+G++ ++ + NA GN K N L
Sbjct: 64 QW-GMSRTMVA---------NLVAGVTEGFKKELEITGVGYRANAQ-GNTLKL----N-L 107
Query: 122 GEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALINQ 166
G + GVTV S + E+V++G D + V AA I +
Sbjct: 108 GYSHDVDFTVPAGVTV--STPKQTEIVVEGIDQQQVGEVAAKIRE 150
>TIGR_CMR|CHY_2294 [details] [associations]
symbol:CHY_2294 "ribosomal protein L6" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000702 InterPro:IPR002358
InterPro:IPR019906 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903 KO:K02933
OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 ProtClustDB:PRK05498 HAMAP:MF_01365_B
PANTHER:PTHR11655:SF6 RefSeq:YP_361103.1 HSSP:Q5SHQ3
ProteinModelPortal:Q3A9T1 SMR:Q3A9T1 STRING:Q3A9T1 GeneID:3726911
KEGG:chy:CHY_2294 PATRIC:21277659
BioCyc:CHYD246194:GJCN-2293-MONOMER Uniprot:Q3A9T1
Length = 182
Score = 109 (43.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 38/160 (23%), Positives = 75/160 (46%)
Query: 5 LSSETMDIPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWF 64
+ + + +P GV+VK+ + V+GP+G L+R+F H D + D G + L ++
Sbjct: 4 IGRKPIPVPQGVEVKVEGTTVTVKGPKGSLTREF-HP--DMKITFD---GSQIL-VERPS 56
Query: 65 GSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEK 124
++ A + + N+I GVT GY+ + V + A+ + + G
Sbjct: 57 DEKEHKALHGLTRTLINNMIVGVTNGYQKSLELVGVGY--RAAKQGRKLVLTV----GYS 110
Query: 125 KVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRSAALI 164
++D +G+ + ++++++ G D ELV AA I
Sbjct: 111 HPVEMDPPEGIEI--EVPAQNQIIVKGIDKELVGNFAATI 148
>SGD|S000001190 [details] [associations]
symbol:MRPL6 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;IDA;IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0032543 "mitochondrial
translation" evidence=IC] [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=IDA;IPI] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] InterPro:IPR000702
InterPro:IPR002358 InterPro:IPR019906 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525
SGD:S000001190 EMBL:BK006934 GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 GO:GO:0019843 EMBL:U10397 EMBL:X69480 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039904 OrthoDB:EOG4RZ28K PIR:S46764
RefSeq:NP_012017.1 ProteinModelPortal:P32904 SMR:P32904
DIP:DIP-5622N IntAct:P32904 MINT:MINT-503396 STRING:P32904
PaxDb:P32904 EnsemblFungi:YHR147C GeneID:856552 KEGG:sce:YHR147C
CYGD:YHR147c OMA:MWGTVRS NextBio:982360 Genevestigator:P32904
GermOnline:YHR147C Uniprot:P32904
Length = 214
Score = 111 (44.1 bits), Expect = 0.00010, P = 0.00010
Identities = 47/171 (27%), Positives = 84/171 (49%)
Query: 25 IEVEGPRGKLSRDFKHLNLDF-HLMTDEETGKRKLKIDAWFGSRKTSAAIRTALSHVGNL 83
I V+GP+G+LS + DF HL DE+ GK + + + S T S + N
Sbjct: 56 ITVKGPKGELSVEVP----DFLHLDKDEKHGKINVTVQNSEDKHQRSMW-GTVRSLINNH 110
Query: 84 ITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDMLDGVTVIRSDKV 143
I GVT+G+ +RFV + A + N+ K + ++ +G + +D+ +G+ V
Sbjct: 111 IIGVTEGHLAVLRFVGTGY--RAQLENDGKFVNVK--VGASIKQGLDVPEGIVV--KTPA 164
Query: 144 KDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKSTILGEE 194
L+++G + + V AA + +K H K GIYV++++ L ++
Sbjct: 165 PTSLIIEGCNKQQVLLFAAKL-RKFHPPEPYKGK---GIYVNDETIKLKDK 211
>UNIPROTKB|P0AG55 [details] [associations]
symbol:rplF "50S ribosomal subunit protein L6"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000702
InterPro:IPR002358 InterPro:IPR019906 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525
EMBL:X01563 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0046677 EMBL:U18997
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 PDB:2VHM PDBsum:2VHM
PDB:2RDO PDBsum:2RDO eggNOG:COG0097 HOGENOM:HOG000039903 KO:K02933
OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12
PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y
PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS
PDB:1EG0 PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4
PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM
PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK
PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L
PDB:2Z4N PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R
PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19
PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR
PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:487D PDB:4GAR
PDB:4GAU PDBsum:1EG0 PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6
PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA
PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM
PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG
PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ
PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N
PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P
PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT
PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:487D PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
ProtClustDB:PRK05498 HAMAP:MF_01365_B PANTHER:PTHR11655:SF6
PIR:D65123 RefSeq:NP_417764.1 RefSeq:YP_492127.1
ProteinModelPortal:P0AG55 SMR:P0AG55 DIP:DIP-35860N IntAct:P0AG55
MINT:MINT-1244940 PaxDb:P0AG55 PRIDE:P0AG55
EnsemblBacteria:EBESCT00000002485 EnsemblBacteria:EBESCT00000014824
GeneID:12934434 GeneID:947803 KEGG:ecj:Y75_p3871 KEGG:eco:b3305
PATRIC:32122042 EchoBASE:EB0862 EcoGene:EG10869
BioCyc:EcoCyc:EG10869-MONOMER BioCyc:ECOL316407:JW3267-MONOMER
EvolutionaryTrace:P0AG55 Genevestigator:P0AG55 Uniprot:P0AG55
Length = 177
Score = 104 (41.7 bits), Expect = 0.00040, P = 0.00040
Identities = 41/151 (27%), Positives = 68/151 (45%)
Query: 12 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEETGKRKLKIDAWFGSRKTSA 71
+P GV VKIN +VI ++G G+L+R H G R D W A
Sbjct: 11 VPAGVDVKINGQVITIKGKNGELTRTLNDAVEVKHADNTLTFGPRDGYADGW-------A 63
Query: 72 AIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVDM 131
TA + + +++ GVT+G+ K++ V + A++ N I + LG +
Sbjct: 64 QAGTARALLNSMVIGVTEGFTKKLQLVGVGY--RAAVKGN--VINLS--LGFSHPVDHQL 117
Query: 132 LDGVTVIRSDKVKDELVLDGNDIELVSRSAA 162
G+T + E+VL G D +++ + AA
Sbjct: 118 PAGITA--ECPTQTEIVLKGADKQVIGQVAA 146
>UNIPROTKB|Q9KNZ9 [details] [associations]
symbol:rplF "50S ribosomal protein L6" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000702 InterPro:IPR002358
InterPro:IPR019906 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0097 KO:K02933 OMA:INNMVVG
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 ProtClustDB:PRK05498 HAMAP:MF_01365_B
PANTHER:PTHR11655:SF6 PIR:G82057 RefSeq:NP_232209.1
ProteinModelPortal:Q9KNZ9 SMR:Q9KNZ9 DNASU:2615598 GeneID:2615598
KEGG:vch:VC2581 PATRIC:20084188 Uniprot:Q9KNZ9
Length = 177
Score = 102 (41.0 bits), Expect = 0.00072, P = 0.00072
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 12 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEET-GKRKLKIDAWFGSRKTS 70
IP GV+VK+N + I ++G +G+L+R F H + ++ T G R+ +AW
Sbjct: 11 IPAGVEVKLNGQEITIKGAKGELTRVF-HNGVVIAQEDNQLTFGPREGVANAW------- 62
Query: 71 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVD 130
A TA + V N++ GVT+G+ K+ V A++ N A+ + LG + +
Sbjct: 63 AQAGTARALVKNMVVGVTEGFTKKL--VLKGVGYRAAMKGN--AVGLT--LGFSHPVEHE 116
Query: 131 MLDGVTVIRSDKVKDELVLDGNDIELVSRSAA 162
+ GV + E+VL G D ++V + AA
Sbjct: 117 LPAGVKAECPSQT--EIVLTGCDKQVVGQVAA 146
>TIGR_CMR|VC_2581 [details] [associations]
symbol:VC_2581 "ribosomal protein L6" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000702 InterPro:IPR002358 InterPro:IPR019906
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059
PROSITE:PS00525 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
eggNOG:COG0097 KO:K02933 OMA:INNMVVG Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 TIGRFAMs:TIGR03654
ProtClustDB:PRK05498 HAMAP:MF_01365_B PANTHER:PTHR11655:SF6
PIR:G82057 RefSeq:NP_232209.1 ProteinModelPortal:Q9KNZ9 SMR:Q9KNZ9
DNASU:2615598 GeneID:2615598 KEGG:vch:VC2581 PATRIC:20084188
Uniprot:Q9KNZ9
Length = 177
Score = 102 (41.0 bits), Expect = 0.00072, P = 0.00072
Identities = 45/152 (29%), Positives = 76/152 (50%)
Query: 12 IPDGVKVKINAKVIEVEGPRGKLSRDFKHLNLDFHLMTDEET-GKRKLKIDAWFGSRKTS 70
IP GV+VK+N + I ++G +G+L+R F H + ++ T G R+ +AW
Sbjct: 11 IPAGVEVKLNGQEITIKGAKGELTRVF-HNGVVIAQEDNQLTFGPREGVANAW------- 62
Query: 71 AAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFLGEKKVRKVD 130
A TA + V N++ GVT+G+ K+ V A++ N A+ + LG + +
Sbjct: 63 AQAGTARALVKNMVVGVTEGFTKKL--VLKGVGYRAAMKGN--AVGLT--LGFSHPVEHE 116
Query: 131 MLDGVTVIRSDKVKDELVLDGNDIELVSRSAA 162
+ GV + E+VL G D ++V + AA
Sbjct: 117 LPAGVKAECPSQT--EIVLTGCDKQVVGQVAA 146
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 194 194 0.00076 111 3 11 22 0.48 32
31 0.43 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 50
No. of states in DFA: 571 (61 KB)
Total size of DFA: 137 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.36u 0.15s 18.51t Elapsed: 00:00:01
Total cpu time: 18.37u 0.15s 18.52t Elapsed: 00:00:01
Start: Fri May 10 17:09:44 2013 End: Fri May 10 17:09:45 2013