BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029366
MSLESTLNRTKALDGVRGVHVVPHSPFALKEITEHEDYESTCKSSFIGANQFLLMQRAWQ
QRPSCLRPIRGCIHGDLHLLERVANVLTSLPFIALGLQTPRKNLNMTLYANSLVGVGVTS
SLYHSSRGKLRKYLRWADYAMIATATVCLSRALRDENPKMLMAASALALPIQPLMVSAVH
TGMMEVNSLFFTPS

High Scoring Gene Products

Symbol, full name Information P value
AT1G23110 protein from Arabidopsis thaliana 1.4e-62
AT1G70900 protein from Arabidopsis thaliana 2.7e-61

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029366
        (194 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2201215 - symbol:AT1G23110 "AT1G23110" species...   639  1.4e-62   1
TAIR|locus:2013935 - symbol:AT1G70900 "AT1G70900" species...   627  2.7e-61   1


>TAIR|locus:2201215 [details] [associations]
            symbol:AT1G23110 "AT1G23110" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            EMBL:CP002684 EMBL:AY648308 IPI:IPI00520002 RefSeq:NP_001117336.1
            RefSeq:NP_001117337.1 RefSeq:NP_001185068.1 RefSeq:NP_001185069.1
            RefSeq:NP_173724.2 UniGene:At.41569 UniGene:At.50783
            EnsemblPlants:AT1G23110.1 EnsemblPlants:AT1G23110.2
            EnsemblPlants:AT1G23110.3 EnsemblPlants:AT1G23110.4
            EnsemblPlants:AT1G23110.5 GeneID:838919 KEGG:ath:AT1G23110
            TAIR:At1g23110 InParanoid:Q6DSU0 OMA:IADDFFP PhylomeDB:Q6DSU0
            ProtClustDB:CLSN2689133 Genevestigator:Q6DSU0 Uniprot:Q6DSU0
        Length = 248

 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 122/186 (65%), Positives = 146/186 (78%)

Query:     1 MSLESTLNRTKALDGVRGVHVVPHSPFALKEITEHEDYESTCKSSFIGANQFLLMQRAWQ 60
             MSL++    + AL+G+ GVHV  HSPF+ ++ T+  D+++  KSS + +NQ L ++R WQ
Sbjct:     1 MSLQNVSKSSNALEGIHGVHVTSHSPFSFEKTTQVSDFQTNTKSSVMESNQRLSIERFWQ 60

Query:    61 QRPSCLRPIRGCIHGDLHLLERVANVLTSLPFIALGLQTPRKNLNMTLYANSLVGVGVTS 120
             QRP CLRPI   I GD  +LE  ANV TSLPFI LG+Q PRKNLN  +YANSL+GVG+ S
Sbjct:    61 QRPPCLRPICCSIRGDQSVLETAANVATSLPFIFLGMQAPRKNLNTKVYANSLIGVGIAS 120

Query:   121 SLYHSSRGKLRKYLRWADYAMIATATVCLSRALRDENPKMLMAASALALPIQPLMVSAVH 180
             SLYH+SRGKLRKYLRW DY MIAT T+CLSRALR+ENPK LMAASAL LP QPLMVSAVH
Sbjct:   121 SLYHASRGKLRKYLRWVDYTMIATTTICLSRALRNENPKFLMAASALVLPFQPLMVSAVH 180

Query:   181 TGMMEV 186
             TGMMEV
Sbjct:   181 TGMMEV 186


>TAIR|locus:2013935 [details] [associations]
            symbol:AT1G70900 "AT1G70900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND]
            EMBL:CP002684 EMBL:AC008148 ProtClustDB:CLSN2689133 EMBL:AY050997
            EMBL:AY079318 IPI:IPI00528337 PIR:F96733 RefSeq:NP_565005.1
            UniGene:At.11632 EnsemblPlants:AT1G70900.1 GeneID:843429
            KEGG:ath:AT1G70900 TAIR:At1g70900 InParanoid:Q9SSK4 OMA:CLRPIHC
            PhylomeDB:Q9SSK4 ArrayExpress:Q9SSK4 Genevestigator:Q9SSK4
            Uniprot:Q9SSK4
        Length = 244

 Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
 Identities = 123/186 (66%), Positives = 144/186 (77%)

Query:     1 MSLESTLNRTKALDGVRGVHVVPHSPFALKEITEHEDYESTCKSSFIGANQFLLMQRAWQ 60
             MS +S    +K+L+GV GVHVV HS F  + I +   +ES    +  G  Q L ++R WQ
Sbjct:     1 MSPQSVSKTSKSLEGVHGVHVVSHSHFGFESIGQVSGFES----ADAGTKQRLFIERVWQ 56

Query:    61 QRPSCLRPIRGCIHGDLHLLERVANVLTSLPFIALGLQTPRKNLNMTLYANSLVGVGVTS 120
             QRP CLRPI   IHGD  +LE  ANV+TS+PFI LG+Q PRKNLNM +YANSL+GVG+ S
Sbjct:    57 QRPPCLRPIHCSIHGDQSILETAANVITSIPFIFLGMQAPRKNLNMKVYANSLIGVGIAS 116

Query:   121 SLYHSSRGKLRKYLRWADYAMIATATVCLSRALRDENPKMLMAASALALPIQPLMVSAVH 180
             SLYHSSRGK RKYLRWADY MIATAT+CL+RALR+ENPK LMAASALALP QPL+VSAVH
Sbjct:   117 SLYHSSRGKFRKYLRWADYTMIATATICLTRALREENPKFLMAASALALPFQPLVVSAVH 176

Query:   181 TGMMEV 186
             TGMMEV
Sbjct:   177 TGMMEV 182


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.133   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      194       194   0.00076  111 3  11 22  0.41    32
                                                     31  0.43    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  163 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.99u 0.09s 16.08t   Elapsed:  00:00:00
  Total cpu time:  15.99u 0.09s 16.08t   Elapsed:  00:00:00
  Start:  Fri May 10 17:14:42 2013   End:  Fri May 10 17:14:42 2013

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