BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029369
(194 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356563826|ref|XP_003550159.1| PREDICTED: uncharacterized protein LOC100807125 [Glycine max]
Length = 161
Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/130 (83%), Positives = 113/130 (86%), Gaps = 5/130 (3%)
Query: 34 RRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLD 93
R+P V FA S+ P SP PEIELEFI P+ G DGSYPVER KAISGEKLLRNIMLD
Sbjct: 27 RQPNTVIFAAASS-PESP----PEIELEFIGPKPGSDGSYPVERVKAISGEKLLRNIMLD 81
Query: 94 NKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153
NKIELYATYGK+MNC GGGSCGTCIVEII+GKDLLNERTNTELRYL KKPESWRLACQTI
Sbjct: 82 NKIELYATYGKLMNCAGGGSCGTCIVEIIEGKDLLNERTNTELRYLSKKPESWRLACQTI 141
Query: 154 VGNKENSGKV 163
VGNKENSGKV
Sbjct: 142 VGNKENSGKV 151
>gi|225430081|ref|XP_002281853.1| PREDICTED: uncharacterized protein LOC100250753 [Vitis vinifera]
Length = 172
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/168 (70%), Positives = 135/168 (80%), Gaps = 4/168 (2%)
Query: 3 TSLNFSANQVSTQPPELCLRRSSFKSKLS--SPRRPKFVSFAVNSTEPSSPEPEKPEIEL 60
+LNF+A +S +PPE + ++ +S RRP ++ A NS E S PEKPEIEL
Sbjct: 2 AALNFTA--ISLRPPEKSYVTGNHRNPISFLPGRRPMKIAAAANSVESSPTVPEKPEIEL 59
Query: 61 EFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVE 120
EFI + G DGS+PVERAKA+SGEKLLRNIMLDNKIELYA YGK+MNCGGGGSCGTCIVE
Sbjct: 60 EFIGEKPGSDGSFPVERAKAVSGEKLLRNIMLDNKIELYAPYGKLMNCGGGGSCGTCIVE 119
Query: 121 IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV + +
Sbjct: 120 IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRL 167
>gi|296081922|emb|CBI20927.3| unnamed protein product [Vitis vinifera]
Length = 137
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/130 (82%), Positives = 115/130 (88%)
Query: 39 VSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIEL 98
++ A NS E S PEKPEIELEFI + G DGS+PVERAKA+SGEKLLRNIMLDNKIEL
Sbjct: 3 IAAAANSVESSPTVPEKPEIELEFIGEKPGSDGSFPVERAKAVSGEKLLRNIMLDNKIEL 62
Query: 99 YATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKE 158
YA YGK+MNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKE
Sbjct: 63 YAPYGKLMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKE 122
Query: 159 NSGKVCSRTM 168
NSGKV + +
Sbjct: 123 NSGKVVVQRL 132
>gi|449441962|ref|XP_004138751.1| PREDICTED: uncharacterized protein LOC101202753 isoform 1 [Cucumis
sativus]
Length = 176
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/175 (66%), Positives = 134/175 (76%), Gaps = 14/175 (8%)
Query: 3 TSLNFSANQVSTQPPEL--------CLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEP- 53
+SLN + +S + PE CL +F S+ P RP +S A NS+EP P
Sbjct: 2 SSLNVTTAFLSLRQPEFFSDNANRRCL-IGNFPSR--KPTRP--LSVAANSSEPLLSTPA 56
Query: 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGS 113
EKPEIELEFI P+ G DGS+PV+ KAISG+KLLRNIMLDNK+ELYA YGK+MNCGGGGS
Sbjct: 57 EKPEIELEFIGPKPGSDGSFPVDTVKAISGDKLLRNIMLDNKLELYAPYGKLMNCGGGGS 116
Query: 114 CGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
CGTCIVEI+DGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV + +
Sbjct: 117 CGTCIVEILDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRL 171
>gi|255551138|ref|XP_002516617.1| electron carrier, putative [Ricinus communis]
gi|223544437|gb|EEF45958.1| electron carrier, putative [Ricinus communis]
Length = 171
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/171 (66%), Positives = 128/171 (74%), Gaps = 8/171 (4%)
Query: 1 MATSLNFSANQVSTQPPELCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSP---EPEKPE 57
MAT +NF + +P +F+S L +R V A S+ SSP E PE
Sbjct: 1 MAT-INFVPVSMRRRPEFSSGNEKTFRSSLILKKR--LVKVAAASSLESSPPVMEK--PE 55
Query: 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTC 117
IELEFIAP+AG DG YPV+R KAISGEKLLRNIM +NK+ELYA YGKVMNCGGGGSCGTC
Sbjct: 56 IELEFIAPKAGSDGKYPVDRVKAISGEKLLRNIMSENKLELYAAYGKVMNCGGGGSCGTC 115
Query: 118 IVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
IVEI+DGKDLLNE+TNTELRYLKKK ESWRLACQTIVGNKENSGKV + +
Sbjct: 116 IVEILDGKDLLNEKTNTELRYLKKKAESWRLACQTIVGNKENSGKVVVQRL 166
>gi|224092396|ref|XP_002309590.1| predicted protein [Populus trichocarpa]
gi|222855566|gb|EEE93113.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 122/172 (70%), Gaps = 11/172 (6%)
Query: 1 MATSLNFSANQVSTQPPELCLRRSSFKSKLSSPR---RPKFVS-----FAVNSTEPSSPE 52
MAT +NF +S PEL S + R + VS A + S
Sbjct: 1 MAT-INFGG--ISLMMPELSHANGKGYGNCVSVKVVPRKRLVSVSASASAKSMESSGSVT 57
Query: 53 PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGG 112
+KPEIELEFI P+ DG YPVERAKAISGEKLLRNIM DNKIELYATYGKVMNCGGGG
Sbjct: 58 DQKPEIELEFIGPKPEADGKYPVERAKAISGEKLLRNIMSDNKIELYATYGKVMNCGGGG 117
Query: 113 SCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVC 164
SCGTCIVEI+DG DLLNERTNTELRYLKK PESWRLACQTIVGNKENSGKV
Sbjct: 118 SCGTCIVEILDGNDLLNERTNTELRYLKKNPESWRLACQTIVGNKENSGKVV 169
>gi|242091313|ref|XP_002441489.1| hypothetical protein SORBIDRAFT_09g027890 [Sorghum bicolor]
gi|241946774|gb|EES19919.1| hypothetical protein SORBIDRAFT_09g027890 [Sorghum bicolor]
Length = 185
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/138 (71%), Positives = 114/138 (82%), Gaps = 6/138 (4%)
Query: 33 PRRPKFVSFAVNSTEPS----SPEPE--KPEIELEFIAPRAGDDGSYPVERAKAISGEKL 86
PRR + + +S P+ +P P KP+IELEF+ P+ G DGS+PV+RA+A SGEKL
Sbjct: 34 PRRFRAGTVRCSSASPNVSQGAPAPALPKPQIELEFVGPKPGADGSFPVDRAEAASGEKL 93
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR+IM +NKIELYA YGKVMNCGGGGSCGTCIVEIIDGK+LLNERTNTE RYLKKKP+SW
Sbjct: 94 LRDIMNENKIELYAAYGKVMNCGGGGSCGTCIVEIIDGKELLNERTNTENRYLKKKPDSW 153
Query: 147 RLACQTIVGNKENSGKVC 164
RLACQTIVGNKENSGK C
Sbjct: 154 RLACQTIVGNKENSGKAC 171
>gi|449441964|ref|XP_004138752.1| PREDICTED: uncharacterized protein LOC101202753 isoform 2 [Cucumis
sativus]
Length = 158
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 116/175 (66%), Gaps = 32/175 (18%)
Query: 3 TSLNFSANQVSTQPPEL--------CLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEP- 53
+SLN + +S + PE CL +F S+ P RP +S A NS+EP P
Sbjct: 2 SSLNVTTAFLSLRQPEFFSDNANRRCLI-GNFPSR--KPTRP--LSVAANSSEPLLSTPA 56
Query: 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGS 113
EKPEIELEFI P+ G DGS+PV+ KAISG+KLLRNIMLDNK+ELYA Y
Sbjct: 57 EKPEIELEFIGPKPGSDGSFPVDTVKAISGDKLLRNIMLDNKLELYAPY----------- 105
Query: 114 CGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
I+DGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV + +
Sbjct: 106 -------ILDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVVVQRL 153
>gi|297802756|ref|XP_002869262.1| hypothetical protein ARALYDRAFT_913185 [Arabidopsis lyrata subsp.
lyrata]
gi|297315098|gb|EFH45521.1| hypothetical protein ARALYDRAFT_913185 [Arabidopsis lyrata subsp.
lyrata]
Length = 175
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/121 (78%), Positives = 104/121 (85%), Gaps = 4/121 (3%)
Query: 48 PSSPE----PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYG 103
SSP+ PEIELEF P+ G DGSYPV++AKA+SGEKLLR+IM D KIELYA YG
Sbjct: 46 ASSPQGISAATPPEIELEFFGPKPGSDGSYPVDKAKAVSGEKLLRSIMQDTKIELYAAYG 105
Query: 104 KVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
KVMNCGGGGSCGTCIVEI+DG+DLLNERT+TE RYLKKKPESWRLACQTIVGNKENSGKV
Sbjct: 106 KVMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSGKV 165
Query: 164 C 164
Sbjct: 166 V 166
>gi|226503349|ref|NP_001147484.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195611680|gb|ACG27670.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 182
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/136 (70%), Positives = 112/136 (82%), Gaps = 6/136 (4%)
Query: 34 RRPKFVSFAVNSTEPSSPE------PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLL 87
R + + +ST P+ + P KP+IELEF+ P+ G DGS+PV+RA+A SGEKLL
Sbjct: 37 RHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELEFVGPKPGADGSFPVDRAEAASGEKLL 96
Query: 88 RNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWR 147
R++M +NKIELYA YGKVMNCGGGGSCGTCIVEIIDGK+LLNERTNTE RYLKKKP+SWR
Sbjct: 97 RDVMNENKIELYAAYGKVMNCGGGGSCGTCIVEIIDGKELLNERTNTENRYLKKKPDSWR 156
Query: 148 LACQTIVGNKENSGKV 163
LACQTIVGNKENSGKV
Sbjct: 157 LACQTIVGNKENSGKV 172
>gi|226500972|ref|NP_001150870.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195642484|gb|ACG40710.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 184
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 6/137 (4%)
Query: 34 RRPKFVSFAVNSTEPSSPE------PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLL 87
R + + +ST P+ + P KP+IELEF+ P+ G DGS+PV+RA+A SGEKLL
Sbjct: 39 RHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELEFVGPKPGADGSFPVDRAEATSGEKLL 98
Query: 88 RNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWR 147
R++M +NKIELYA YGKVMNCGGGGSCGTCIVEIIDGK+LLNERTNTE RYLKKKP+SWR
Sbjct: 99 RDVMNENKIELYAAYGKVMNCGGGGSCGTCIVEIIDGKELLNERTNTENRYLKKKPDSWR 158
Query: 148 LACQTIVGNKENSGKVC 164
LACQTIVGNKENSGKV
Sbjct: 159 LACQTIVGNKENSGKVV 175
>gi|413946430|gb|AFW79079.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 184
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 112/137 (81%), Gaps = 6/137 (4%)
Query: 34 RRPKFVSFAVNSTEPSSPE------PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLL 87
R + + +ST P+ + P KP+IELEF+ P+ G DGS+PV+RA+A SGEKLL
Sbjct: 39 RHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELEFVGPKPGADGSFPVDRAEAASGEKLL 98
Query: 88 RNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWR 147
R++M +NKIELYA YGKVMNCGGGGSCGTCIVEIIDGK+LLNERTNTE RYLKKKP+SWR
Sbjct: 99 RDVMNENKIELYAAYGKVMNCGGGGSCGTCIVEIIDGKELLNERTNTENRYLKKKPDSWR 158
Query: 148 LACQTIVGNKENSGKVC 164
LACQTIVGNKENSGKV
Sbjct: 159 LACQTIVGNKENSGKVV 175
>gi|18418042|ref|NP_567899.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
gi|15028325|gb|AAK76639.1| unknown protein [Arabidopsis thaliana]
gi|22136786|gb|AAM91737.1| unknown protein [Arabidopsis thaliana]
gi|332660683|gb|AEE86083.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
Length = 173
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/143 (67%), Positives = 112/143 (78%), Gaps = 7/143 (4%)
Query: 29 KLSSPRRPKFV------SFAVNSTEPSSPEPEKP-EIELEFIAPRAGDDGSYPVERAKAI 81
K+S R + + S + ++ P P EIELEF P+ G DGSYPV++AKA+
Sbjct: 22 KVSGGGRARVISCNSSSSSSSQASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAV 81
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
SG+KLLR+IM DNKIELYA YGKVMNCGGGGSCGTCIVEI+DG+DLLNERT+TE RYLKK
Sbjct: 82 SGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKK 141
Query: 142 KPESWRLACQTIVGNKENSGKVC 164
KPESWRLACQTIVGNKENSGKV
Sbjct: 142 KPESWRLACQTIVGNKENSGKVV 164
>gi|115465347|ref|NP_001056273.1| Os05g0555300 [Oryza sativa Japonica Group]
gi|113579824|dbj|BAF18187.1| Os05g0555300 [Oryza sativa Japonica Group]
gi|215693060|dbj|BAG88480.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632504|gb|EEE64636.1| hypothetical protein OsJ_19490 [Oryza sativa Japonica Group]
Length = 185
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/119 (77%), Positives = 105/119 (88%), Gaps = 1/119 (0%)
Query: 46 TEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKV 105
E + P KP+I+LEF+ P+A DGS+PV+RA A SGEKLLR++M++NKIELYA YGKV
Sbjct: 59 AE-EAAPPPKPQIDLEFVGPKADADGSFPVDRAAAGSGEKLLRDVMVENKIELYAAYGKV 117
Query: 106 MNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVC 164
MNCGGGGSCGTCIVEI+DGK+LLNERTNTE RYLKKKPESWRLACQTIVGNKENSGKV
Sbjct: 118 MNCGGGGSCGTCIVEIVDGKELLNERTNTENRYLKKKPESWRLACQTIVGNKENSGKVV 176
>gi|42573135|ref|NP_974664.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
gi|332660684|gb|AEE86084.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
Length = 180
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 111/141 (78%), Gaps = 7/141 (4%)
Query: 29 KLSSPRRPKFV------SFAVNSTEPSSPEPEKP-EIELEFIAPRAGDDGSYPVERAKAI 81
K+S R + + S + ++ P P EIELEF P+ G DGSYPV++AKA+
Sbjct: 22 KVSGGGRARVISCNSSSSSSSQASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAV 81
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
SG+KLLR+IM DNKIELYA YGKVMNCGGGGSCGTCIVEI+DG+DLLNERT+TE RYLKK
Sbjct: 82 SGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKK 141
Query: 142 KPESWRLACQTIVGNKENSGK 162
KPESWRLACQTIVGNKENSGK
Sbjct: 142 KPESWRLACQTIVGNKENSGK 162
>gi|49328038|gb|AAT58739.1| unknown protein [Oryza sativa Japonica Group]
gi|215693131|dbj|BAG88513.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 91/117 (77%), Positives = 104/117 (88%), Gaps = 1/117 (0%)
Query: 46 TEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKV 105
E + P KP+I+LEF+ P+A DGS+PV+RA A SGEKLLR++M++NKIELYA YGKV
Sbjct: 59 AE-EAAPPPKPQIDLEFVGPKADADGSFPVDRAAAGSGEKLLRDVMVENKIELYAAYGKV 117
Query: 106 MNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGK 162
MNCGGGGSCGTCIVEI+DGK+LLNERTNTE RYLKKKPESWRLACQTIVGNKENSGK
Sbjct: 118 MNCGGGGSCGTCIVEIVDGKELLNERTNTENRYLKKKPESWRLACQTIVGNKENSGK 174
>gi|218197242|gb|EEC79669.1| hypothetical protein OsI_20921 [Oryza sativa Indica Group]
Length = 185
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/119 (76%), Positives = 104/119 (87%), Gaps = 1/119 (0%)
Query: 46 TEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKV 105
E + P KP+I+LEF+ P+A DGS+PV+RA A SGEKLLR++M++NKIELYA YGKV
Sbjct: 59 AE-EAAPPPKPQIDLEFVGPKADADGSFPVDRAAAGSGEKLLRDVMVENKIELYAAYGKV 117
Query: 106 MNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVC 164
MNCGGGGSCGTCIVEI+DGK+ LNERTNTE RYLKKKPESWRLACQTIVGNKENSGKV
Sbjct: 118 MNCGGGGSCGTCIVEIVDGKEFLNERTNTENRYLKKKPESWRLACQTIVGNKENSGKVV 176
>gi|326523007|dbj|BAJ88549.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 182
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/108 (77%), Positives = 98/108 (90%)
Query: 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT 116
+IELEF+ P+ G DGSYPV+RA A+SG+KLLR++M++NKIELYA YGK+MNCGGGGSCGT
Sbjct: 66 QIELEFLGPKPGADGSYPVDRAAAVSGDKLLRDVMVENKIELYAAYGKLMNCGGGGSCGT 125
Query: 117 CIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVC 164
CIVEIIDGK+LL+ RT+ E RYLKKKPESWRL CQTIVGNKENSGKV
Sbjct: 126 CIVEIIDGKELLSPRTDAENRYLKKKPESWRLTCQTIVGNKENSGKVV 173
>gi|195655453|gb|ACG47194.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 184
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 110/137 (80%), Gaps = 6/137 (4%)
Query: 34 RRPKFVSFAVNSTEPSSPE------PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLL 87
R + + +ST P+ + P KP+IELEF+ P+ G DGS+PV+RA+A SGEKLL
Sbjct: 39 RHSRAATVRCSSTSPNVSQGAPAPAPPKPQIELEFVGPKPGPDGSFPVDRAEATSGEKLL 98
Query: 88 RNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWR 147
R++M +NKIELYA YGKVMNCGGGGSCGTCIVEIIDGK+LLNERTN E RYLKKKP+SWR
Sbjct: 99 RDVMNENKIELYAAYGKVMNCGGGGSCGTCIVEIIDGKELLNERTNXENRYLKKKPDSWR 158
Query: 148 LACQTIVGNKENSGKVC 164
LACQTIVGNK NSGKV
Sbjct: 159 LACQTIVGNKXNSGKVV 175
>gi|388503094|gb|AFK39613.1| unknown [Lotus japonicus]
Length = 160
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 101/131 (77%), Positives = 108/131 (82%), Gaps = 6/131 (4%)
Query: 34 RRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLD 93
+RP V FAVNS P P PEIELEFI P+ D +++AKAISG KLLRNIMLD
Sbjct: 27 QRPNSVLFAVNSP--PPPPPSPPEIELEFIGPKGEGD----LDKAKAISGAKLLRNIMLD 80
Query: 94 NKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153
NKIELYATYGK+MNCGGGGSCGTCIVEII+G DLLNERTNTELRYLKKKPESWRLACQTI
Sbjct: 81 NKIELYATYGKLMNCGGGGSCGTCIVEIIEGGDLLNERTNTELRYLKKKPESWRLACQTI 140
Query: 154 VGNKENSGKVC 164
VGNKEN GKV
Sbjct: 141 VGNKENCGKVV 151
>gi|388492882|gb|AFK34507.1| unknown [Medicago truncatula]
Length = 163
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/131 (75%), Positives = 110/131 (83%), Gaps = 3/131 (2%)
Query: 34 RRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLD 93
RRP V NS E S PEIELEF+ P+ DGS+PV++ KAISGEKL+R+IM D
Sbjct: 27 RRPNSVCLVANSPESPS---PPPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSD 83
Query: 94 NKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153
NKI+LYATYGK+MNCGGGGSCGTCIVEII+GKDLLNERTNTEL+YLKKKPESWRLACQTI
Sbjct: 84 NKIDLYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELKYLKKKPESWRLACQTI 143
Query: 154 VGNKENSGKVC 164
VGNKENSGKV
Sbjct: 144 VGNKENSGKVV 154
>gi|357436821|ref|XP_003588686.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
gi|355477734|gb|AES58937.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
Length = 182
Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/130 (76%), Positives = 110/130 (84%), Gaps = 3/130 (2%)
Query: 34 RRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLD 93
RRP V NS E S PEIELEF+ P+ DGS+PV++ KAISGEKL+R+IM D
Sbjct: 46 RRPNSVCLVANSPESPS---PPPEIELEFVGPKPEGDGSFPVDKVKAISGEKLMRSIMSD 102
Query: 94 NKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153
NKI+LYATYGK+MNCGGGGSCGTCIVEII+GKDLLNERTNTEL+YLKKKPESWRLACQTI
Sbjct: 103 NKIDLYATYGKLMNCGGGGSCGTCIVEIIEGKDLLNERTNTELKYLKKKPESWRLACQTI 162
Query: 154 VGNKENSGKV 163
VGNKENSGKV
Sbjct: 163 VGNKENSGKV 172
>gi|357128564|ref|XP_003565942.1| PREDICTED: uncharacterized protein LOC100844664 [Brachypodium
distachyon]
Length = 180
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 114/168 (67%), Gaps = 20/168 (11%)
Query: 12 VSTQPPELCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPE-----------KPEIEL 60
V QPP + + + A SS P+ KP+IEL
Sbjct: 17 VLPQPP---------TATRTRTTCHRRRHTAATRVRCSSASPDLSPAAPSPAPPKPQIEL 67
Query: 61 EFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVE 120
EF+ P+AG DGSYPV+RA A SGEKLLR++ML+NK+ELYA YGK+MNCGGGGSCGTCIVE
Sbjct: 68 EFLGPKAGADGSYPVDRAAAASGEKLLRDVMLENKLELYAAYGKLMNCGGGGSCGTCIVE 127
Query: 121 IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
IIDGK+LL+ERT E RYLKKKP+SWRL CQTIVGNKENSGKV + +
Sbjct: 128 IIDGKELLSERTAAENRYLKKKPDSWRLTCQTIVGNKENSGKVVVQRL 175
>gi|413920596|gb|AFW60528.1| hypothetical protein ZEAMMB73_761500 [Zea mays]
Length = 139
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/109 (73%), Positives = 95/109 (87%)
Query: 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSC 114
+ +I + P+ G DGS+P++RA+A SGEKLL ++M +NKIELY YGKVMNCGGGGSC
Sbjct: 21 RAQIPRPTVGPKPGADGSFPLDRAEATSGEKLLCDVMNENKIELYVAYGKVMNCGGGGSC 80
Query: 115 GTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
GTCIVEIIDGK+LLNERT+TE +YLKKKP+SWRLACQTIVGNKENSGKV
Sbjct: 81 GTCIVEIIDGKELLNERTSTENQYLKKKPDSWRLACQTIVGNKENSGKV 129
>gi|168013122|ref|XP_001759250.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689563|gb|EDQ75934.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/121 (65%), Positives = 96/121 (79%), Gaps = 4/121 (3%)
Query: 45 STEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGK 104
S+ PS+ + P I+LE + P AG + V SGEKLLRNI+L+NK+ELY YGK
Sbjct: 55 SSSPSAVDLAPPTIDLEIVGPEAGGE----VTTTSVGSGEKLLRNIILENKLELYGLYGK 110
Query: 105 VMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVC 164
VMNCGGGGSCGTC+VEI++GK+LLNERT+TE +YLKKKPESWRL+CQTIVG+K NSGKV
Sbjct: 111 VMNCGGGGSCGTCVVEILEGKELLNERTDTEYKYLKKKPESWRLSCQTIVGDKSNSGKVT 170
Query: 165 S 165
S
Sbjct: 171 S 171
>gi|242045682|ref|XP_002460712.1| hypothetical protein SORBIDRAFT_02g033590 [Sorghum bicolor]
gi|241924089|gb|EER97233.1| hypothetical protein SORBIDRAFT_02g033590 [Sorghum bicolor]
Length = 195
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 5/125 (4%)
Query: 43 VNSTEPSSPEPEK---PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELY 99
V + +PEPE+ P I+ F++PR DG+ V A G+KL R+IMLD I+LY
Sbjct: 57 VGAPSAGAPEPEQVEPPSIDFAFVSPRLLPDGTPDVHYRTACGGQKL-RDIMLDAYIDLY 115
Query: 100 ATYGKVM-NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKE 158
Y KV+ NC GGG CGTC+VE+++GK++L+ +T+ E LK+KP++WRLACQ VGN +
Sbjct: 116 GPYDKVLLNCAGGGVCGTCLVEVVEGKEMLSPKTDVEKELLKRKPKTWRLACQATVGNAD 175
Query: 159 NSGKV 163
++G++
Sbjct: 176 STGQM 180
>gi|398313925|emb|CCI55389.1| NDH subunit PnsB3 [Marchantia polymorpha]
Length = 184
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 98/140 (70%), Gaps = 13/140 (9%)
Query: 34 RRPKFVSFAV------NSTEPSSPEPEK---PEIELEFIAPRAGDDGSYPVERAKAISGE 84
RRP+ ++ V ++ SS PE+ P IEL+F P AG + SGE
Sbjct: 39 RRPQRMTSLVAALDTETASTSSSENPEQQGPPMIELQFYGPEAGS----VAQTLTVQSGE 94
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE 144
K +R M +NK+ELYA YGKVMNCGGGGSCGTC+V+I++G++LL+ERT+ E +YLKKKPE
Sbjct: 95 KNMRKFMTENKLELYALYGKVMNCGGGGSCGTCLVDILEGQELLSERTDAEYKYLKKKPE 154
Query: 145 SWRLACQTIVGNKENSGKVC 164
SWRLACQTI+G+K NSGKV
Sbjct: 155 SWRLACQTIIGDKSNSGKVV 174
>gi|115472141|ref|NP_001059669.1| Os07g0489800 [Oryza sativa Japonica Group]
gi|33146986|dbj|BAC80058.1| 2Fe-2S iron-sulfur cluster protein-like [Oryza sativa Japonica
Group]
gi|113611205|dbj|BAF21583.1| Os07g0489800 [Oryza sativa Japonica Group]
gi|125600273|gb|EAZ39849.1| hypothetical protein OsJ_24289 [Oryza sativa Japonica Group]
gi|215686926|dbj|BAG90796.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 79/111 (71%), Gaps = 2/111 (1%)
Query: 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVM-NCGGGG 112
E P ++ F+APR DG+ V A G+KL R+IMLDN I+LY Y K++ NC GGG
Sbjct: 86 EPPSVDFAFVAPRLLPDGTPDVHYRTACGGQKL-RDIMLDNYIDLYGPYDKLLLNCEGGG 144
Query: 113 SCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
CGTCIVE+++G +LL+ +T+ E LK+KP++WRLACQ VGN +++G++
Sbjct: 145 ECGTCIVEVVEGGELLSPKTDVEKELLKRKPKTWRLACQATVGNPDSTGQM 195
>gi|388506454|gb|AFK41293.1| unknown [Lotus japonicus]
Length = 83
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/73 (94%), Positives = 71/73 (97%)
Query: 91 MLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLAC 150
MLDNKIELYATYGK+MNCGGGGSCGTCIVEII+G DLLNERTNTELRYLKKKPESWRLAC
Sbjct: 1 MLDNKIELYATYGKLMNCGGGGSCGTCIVEIIEGDDLLNERTNTELRYLKKKPESWRLAC 60
Query: 151 QTIVGNKENSGKV 163
QTIVGNKEN GKV
Sbjct: 61 QTIVGNKENCGKV 73
>gi|79326134|ref|NP_001031772.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
gi|332660686|gb|AEE86086.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
Length = 176
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 90/120 (75%), Gaps = 7/120 (5%)
Query: 29 KLSSPRRPKFV------SFAVNSTEPSSPEPEKP-EIELEFIAPRAGDDGSYPVERAKAI 81
K+S R + + S + ++ P P EIELEF P+ G DGSYPV++AKA+
Sbjct: 22 KVSGGGRARVISCNSSSSSSSQASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAV 81
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
SG+KLLR+IM DNKIELYA YGKVMNCGGGGSCGTCIVEI+DG+DLLNERT+TE RYLKK
Sbjct: 82 SGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKK 141
>gi|297834498|ref|XP_002885131.1| hypothetical protein ARALYDRAFT_897928 [Arabidopsis lyrata subsp.
lyrata]
gi|297330971|gb|EFH61390.1| hypothetical protein ARALYDRAFT_897928 [Arabidopsis lyrata subsp.
lyrata]
Length = 204
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 20/168 (11%)
Query: 12 VSTQPPELCLRRSSFKSKLSSPR----RPKF----------VSFAVNSTEPSSPEP-EKP 56
V++ PP S K+KLS+P+ R K +S A S P++ EP E P
Sbjct: 12 VASLPPNHSF---SHKTKLSNPKSYFLRSKHNAAGTKTVRAISTAPASQPPAADEPDEPP 68
Query: 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVM-NCGGGGSCG 115
++ F+ DG+ V +A G+KL R+IMLD+ IELY Y K + NC G G+C
Sbjct: 69 AVDFAFVHSVLLPDGTPDVHWRRACGGQKL-RDIMLDSNIELYGPYSKPLSNCAGVGTCA 127
Query: 116 TCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
TC+VEI++GK+LLN RT+ E LK+KP++WRLACQT VGN +++G V
Sbjct: 128 TCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLV 175
>gi|226532728|ref|NP_001147712.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195613236|gb|ACG28448.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
Length = 193
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query: 42 AVNSTEPSSPEPEKPE---IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIEL 98
A + EPS+ PE+ E I+ F++PR DG+ V A G+KL R++MLD I+L
Sbjct: 54 APSGGEPSAGTPEEVEESTIDFAFVSPRLLPDGTPDVHYRTARGGQKL-RDVMLDGYIDL 112
Query: 99 YATYGKVM-NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNK 157
Y Y KV+ NC GGG CGTC+VE+++GK++L+ +T E LK+KP++WRLACQ VGN
Sbjct: 113 YGPYDKVLLNCSGGGVCGTCVVEVVEGKEMLSPKTEVEKELLKRKPKTWRLACQATVGNA 172
Query: 158 ENSGKV 163
+++G++
Sbjct: 173 DSTGQM 178
>gi|15228165|ref|NP_188246.1| NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]
gi|9279708|dbj|BAB01265.1| unnamed protein product [Arabidopsis thaliana]
gi|14596159|gb|AAK68807.1| Unknown protein [Arabidopsis thaliana]
gi|30023670|gb|AAP13368.1| At3g16240 [Arabidopsis thaliana]
gi|332642269|gb|AEE75790.1| NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]
Length = 204
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 95/147 (64%), Gaps = 5/147 (3%)
Query: 26 FKSKLSSPRRP--KFVSFAVNSTEPSSPEP-EKPEIELEFIAPRAGDDGSYPVERAKAIS 82
F+SK ++ R + +S A S P++ EP E P ++ F+ DG+ V +A
Sbjct: 35 FRSKHNAARTKTVRAISTAPASQPPAADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANG 94
Query: 83 GEKLLRNIMLDNKIELYATYGKVM-NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
G+KL R+IMLD+ IELY Y K + NC G G+C TC+VEI++GK+LLN RT+ E LK+
Sbjct: 95 GQKL-RDIMLDSNIELYGPYSKPLSNCAGVGTCATCMVEIVNGKELLNPRTDIEKEKLKR 153
Query: 142 KPESWRLACQTIVGNKENSGKVCSRTM 168
KP++WRLACQT VGN +++G V + +
Sbjct: 154 KPKNWRLACQTNVGNPDSTGLVVIQQL 180
>gi|449448008|ref|XP_004141758.1| PREDICTED: uncharacterized protein LOC101218377 [Cucumis sativus]
gi|449491773|ref|XP_004158999.1| PREDICTED: uncharacterized protein LOC101228255 [Cucumis sativus]
Length = 197
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 95/151 (62%), Gaps = 12/151 (7%)
Query: 19 LCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERA 78
L RR+ ++ + P+ + +E + PE E P ++L F+ DG+ V
Sbjct: 36 LTFRRTQVRAVGTVPQ---------SQSEATDPE-EPPIVDLAFVNSVLLPDGTPDVHLR 85
Query: 79 KAISGEKLLRNIMLDNKIELYATYGK-VMNCGGGGSCGTCIVEIIDGKDLLNERTNTELR 137
+A G+KL RNIMLD+ I+LY Y + ++NC GGG+CGTC+VEI++GK+LLN RT+ E
Sbjct: 86 RACGGQKL-RNIMLDSNIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKD 144
Query: 138 YLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
LK+KP++WRLACQT VG ++ G + + +
Sbjct: 145 KLKRKPKNWRLACQTTVGKPDSRGMLVVQQL 175
>gi|125558371|gb|EAZ03907.1| hypothetical protein OsI_26041 [Oryza sativa Indica Group]
Length = 210
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVM-NCGGGGSCGT 116
++ F+APR DG+ V A G+KL R+IMLDN I+LY Y K++ NC GGG CGT
Sbjct: 90 VDFAFVAPRLLPDGTPDVHYRTACGGQKL-RDIMLDNYIDLYGPYDKLLLNCEGGGECGT 148
Query: 117 CIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
CIVE+++G +LL+ +T+ E LK+KP++WRLACQ VGN +++G++
Sbjct: 149 CIVEVVEGGELLSPKTDVEKELLKRKPKTWRLACQATVGNPDSTGQM 195
>gi|226530383|ref|NP_001141368.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|194704210|gb|ACF86189.1| unknown [Zea mays]
gi|195611892|gb|ACG27776.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|195637836|gb|ACG38386.1| electron carrier/ electron transporter/ iron ion binding protein
[Zea mays]
gi|414886715|tpg|DAA62729.1| TPA: electron carrier/ electron transporter/ iron ion binding
protein [Zea mays]
Length = 191
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVM-NCGGGGSCGT 116
++ F++PR DG+ V A G+KL R+IMLD I+LY Y KV+ NC GGG CGT
Sbjct: 71 VDFAFVSPRLLPDGTPDVHYRTARGGQKL-RDIMLDGYIDLYGPYDKVLLNCSGGGVCGT 129
Query: 117 CIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
CIVE+++GK++L+ +T+ E LK+KP++WRLACQ VGN +++G++
Sbjct: 130 CIVEVVEGKEMLSPKTDVEKELLKRKPKTWRLACQATVGNADSTGQM 176
>gi|357122795|ref|XP_003563100.1| PREDICTED: uncharacterized protein LOC100845974 [Brachypodium
distachyon]
Length = 187
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 81/126 (64%), Gaps = 5/126 (3%)
Query: 42 AVNSTEPS---SPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIEL 98
AV + EPS PE E P ++ F++PR DG+ V A G+KL R+IML I+L
Sbjct: 47 AVETDEPSVAAPPEEEPPSVDFAFVSPRLLPDGTPDVHYRTACGGQKL-RDIMLQGHIDL 105
Query: 99 YATYGK-VMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNK 157
Y Y K ++NC GGG CGTCIVE+++G ++L+ + E L++KP++WRLACQ VG
Sbjct: 106 YGPYDKFLLNCSGGGECGTCIVEVVEGGEMLSPKNEVEKEKLRRKPKTWRLACQATVGKP 165
Query: 158 ENSGKV 163
++ G++
Sbjct: 166 DSRGQM 171
>gi|326523759|dbj|BAJ93050.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 196
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Query: 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVM-NCGGGG 112
E P ++ F++PR DG+ V A G+KL R+IMLD I+LY Y K++ NC GGG
Sbjct: 72 EPPSVDFAFVSPRLLPDGTPDVHYRTACGGQKL-RDIMLDAYIDLYGPYDKLLLNCSGGG 130
Query: 113 SCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
CGTCIVE+++G ++L+ + E LK+KP+SWRLACQ VGN +++G++
Sbjct: 131 ECGTCIVEVVEGGEMLSPKNEVEKEKLKRKPKSWRLACQATVGNPDSTGQM 181
>gi|357454845|ref|XP_003597703.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
gi|355486751|gb|AES67954.1| Electron carrier/ electron transporter/ iron ion binding protein
[Medicago truncatula]
Length = 191
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Query: 46 TEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKV 105
+E ++ + P I F++ DG+ V A G+KL RNIMLD+ IELY YG++
Sbjct: 48 SETTTDSNDPPSIGFAFVSSVLLPDGTPDVHYRTACGGQKL-RNIMLDSNIELYGPYGRI 106
Query: 106 M-NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
+ NCGGGG+C TC+VE+++GK+LL+ T+ E LK+KP++WRLACQT VG +++G V
Sbjct: 107 LLNCGGGGTCATCMVEVLEGKELLSPCTDKEKEKLKRKPKNWRLACQTTVGEADSTGVV 165
>gi|388508898|gb|AFK42515.1| unknown [Lotus japonicus]
Length = 195
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Query: 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVM-NCGGGG 112
E P + F++ DG+ + A G+KL R+IMLD+ IELY YGK+ NC GGG
Sbjct: 60 EPPSVGFAFVSSVLLPDGTPDIHYRSATGGQKL-RDIMLDSNIELYGPYGKLFSNCAGGG 118
Query: 113 SCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
+C TC+VE+++G +LLN RT+ E LK+KP++WRLACQT VG +++G V
Sbjct: 119 TCATCMVEVLEGTELLNPRTDKEKEKLKRKPKNWRLACQTTVGEPDSTGVV 169
>gi|449528676|ref|XP_004171329.1| PREDICTED: uncharacterized LOC101202753, partial [Cucumis sativus]
Length = 143
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 91/127 (71%), Gaps = 14/127 (11%)
Query: 3 TSLNFSANQVSTQPPELCL----RR---SSFKSKLSSPRRPKFVSFAVNSTEP--SSPEP 53
+SLN + +S Q PE RR +F S+ P RP +S A NS+EP S+P
Sbjct: 2 SSLNVTTAFLSLQQPEFFFDNANRRCLIGNFPSR--KPTRP--LSVAANSSEPLLSTPA- 56
Query: 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGS 113
EKPEIELEFI P+ G DGS+PV+ KAISG+KLLRNIMLDNK+ELYA YGK+MNCGGGGS
Sbjct: 57 EKPEIELEFIGPKPGSDGSFPVDTVKAISGDKLLRNIMLDNKLELYAPYGKLMNCGGGGS 116
Query: 114 CGTCIVE 120
CGTCIVE
Sbjct: 117 CGTCIVE 123
>gi|224059120|ref|XP_002299725.1| predicted protein [Populus trichocarpa]
gi|118486517|gb|ABK95098.1| unknown [Populus trichocarpa]
gi|222846983|gb|EEE84530.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 88/136 (64%), Gaps = 6/136 (4%)
Query: 32 SPRRPKFVSFAV---NSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLR 88
SP R K + + +S+E PE E P + L F+ DG+ V A G+KL R
Sbjct: 32 SPSRLKIRAVSTVPESSSEAKEPE-EPPCVHLAFVHSVLLPDGTPDVHFRNAPGGQKL-R 89
Query: 89 NIMLDNKIELYATYGK-VMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWR 147
+IM+D IELY Y + ++NCGGGG+C TC+VE+I+GK+LL+ RT+ E LKKKP++WR
Sbjct: 90 DIMMDTNIELYGPYSRALLNCGGGGTCATCMVEVIEGKELLSPRTDNEKEKLKKKPKNWR 149
Query: 148 LACQTIVGNKENSGKV 163
LACQT VGN ++ G V
Sbjct: 150 LACQTTVGNPDSRGLV 165
>gi|302782810|ref|XP_002973178.1| hypothetical protein SELMODRAFT_59158 [Selaginella moellendorffii]
gi|300158931|gb|EFJ25552.1| hypothetical protein SELMODRAFT_59158 [Selaginella moellendorffii]
Length = 104
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 80/99 (80%)
Query: 70 DGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLN 129
DG V + SGEK+LRN+M +NK+ELY YGK+MNCGGGGSCGTCIVEI++G++LL+
Sbjct: 1 DGKGDVLKTSVKSGEKVLRNVMRENKLELYGLYGKLMNCGGGGSCGTCIVEILEGQELLS 60
Query: 130 ERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
+ T+ E ++LK+KP +WRLACQTIVG+K N+GKV + +
Sbjct: 61 QPTSAEKKHLKQKPGTWRLACQTIVGDKSNAGKVVVQRL 99
>gi|302789814|ref|XP_002976675.1| hypothetical protein SELMODRAFT_59157 [Selaginella moellendorffii]
gi|300155713|gb|EFJ22344.1| hypothetical protein SELMODRAFT_59157 [Selaginella moellendorffii]
Length = 104
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 80/99 (80%)
Query: 70 DGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLN 129
DG V + SGEK+LRN+M +NK+ELY YGK+MNCGGGGSCGTCIVEI++G++LL+
Sbjct: 1 DGKGDVLKTSVKSGEKVLRNVMRENKLELYGLYGKLMNCGGGGSCGTCIVEILEGQELLS 60
Query: 130 ERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
+ T+ E ++LK+KP +WRLACQTIVG+K N+G+V + +
Sbjct: 61 QPTSAEKKHLKQKPGTWRLACQTIVGDKSNAGRVVVQRL 99
>gi|302844552|ref|XP_002953816.1| hypothetical protein VOLCADRAFT_64100 [Volvox carteri f.
nagariensis]
gi|300260924|gb|EFJ45140.1| hypothetical protein VOLCADRAFT_64100 [Volvox carteri f.
nagariensis]
Length = 110
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 73/108 (67%), Gaps = 7/108 (6%)
Query: 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCG 115
P ++L + R G + VE SG+ +LR +++ K++LY T+GKV CGG G+CG
Sbjct: 2 PTVQL-TVQTREGQSLNISVE-----SGD-ILRTVLMAEKVDLYTTWGKVWQCGGVGNCG 54
Query: 116 TCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
TCIVE+ DG +LL+ERT E + L KP +WRLACQT+VG+ E++G V
Sbjct: 55 TCIVEVRDGAELLSERTPVEKKKLSGKPATWRLACQTLVGDGESTGVV 102
>gi|3063711|emb|CAA18602.1| hypothetical protein [Arabidopsis thaliana]
gi|7270163|emb|CAB79976.1| hypothetical protein [Arabidopsis thaliana]
Length = 163
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 60/85 (70%), Gaps = 18/85 (21%)
Query: 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT 116
EIELEF P+ G DGSYPV++AKA+SG+KLLR+IM DNKIELYA Y
Sbjct: 57 EIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAY-------------- 102
Query: 117 CIVEIIDGKDLLNERTNTELRYLKK 141
I+DG+DLLNERT+TE RYLKK
Sbjct: 103 ----ILDGRDLLNERTDTENRYLKK 123
>gi|255549894|ref|XP_002515998.1| electron carrier, putative [Ricinus communis]
gi|223544903|gb|EEF46418.1| electron carrier, putative [Ricinus communis]
Length = 204
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 77/114 (67%), Gaps = 2/114 (1%)
Query: 51 PEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGK-VMNCG 109
P E P ++ F+ DG+ V G+KL R+ MLD+ I+LY YG+ ++NC
Sbjct: 67 PPEEPPSVKFVFVHSVLLPDGTPDVHFRTTCGGQKL-RDTMLDSNIDLYGPYGRPLLNCA 125
Query: 110 GGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
GGG+CG+C+VE++ GK+LL+ RT E + LKKKP++WRLACQT VG+ +++G V
Sbjct: 126 GGGTCGSCMVEVVMGKELLSPRTEKEKKILKKKPKNWRLACQTTVGSPDSTGLV 179
>gi|158335182|ref|YP_001516354.1| 2Fe-2S type ferredoxin [Acaryochloris marina MBIC11017]
gi|158305423|gb|ABW27040.1| ferredoxin, 2Fe-2S type [Acaryochloris marina MBIC11017]
Length = 99
Score = 92.0 bits (227), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 57/74 (77%)
Query: 81 ISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK 140
IS E LR++ LDNKI+LY GK+MNCGG G CGTC++E+++G + L+ RT E LK
Sbjct: 15 ISEEDDLRSVALDNKIDLYTFKGKLMNCGGYGQCGTCLIEVVEGMENLSPRTPVEDAKLK 74
Query: 141 KKPESWRLACQTIV 154
+KPE++RLACQT+V
Sbjct: 75 RKPETYRLACQTLV 88
>gi|254413036|ref|ZP_05026808.1| hypothetical protein MC7420_2196 [Coleofasciculus chthonoplastes
PCC 7420]
gi|196180200|gb|EDX75192.1| hypothetical protein MC7420_2196 [Coleofasciculus chthonoplastes
PCC 7420]
Length = 98
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L NKI+LY GK+MNCGG G CGTCIVE+++G + L+ RT E R LKKKPES+
Sbjct: 21 LREKALQNKIDLYTFKGKLMNCGGYGQCGTCIVEVVEGMENLSPRTEVEQRKLKKKPESY 80
Query: 147 RLACQTIV 154
RLACQ +V
Sbjct: 81 RLACQALV 88
>gi|359460292|ref|ZP_09248855.1| 2Fe-2S type ferredoxin [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 55/71 (77%)
Query: 84 EKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP 143
E LR++ LDNKI+LY GK+MNCGG G CGTC++E+++G + L+ RT E LK+KP
Sbjct: 18 EDDLRSVALDNKIDLYTFKGKLMNCGGYGQCGTCLIEVVEGMENLSPRTPVEDAKLKRKP 77
Query: 144 ESWRLACQTIV 154
E++RLACQT+V
Sbjct: 78 ETYRLACQTLV 88
>gi|119485082|ref|ZP_01619467.1| probable ferredoxin [Lyngbya sp. PCC 8106]
gi|119457310|gb|EAW38435.1| probable ferredoxin [Lyngbya sp. PCC 8106]
Length = 98
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 54/68 (79%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+ +I+LY GK+MNCGG G CGTCIVE+++G + L+ RT+TE R LKKKP+S+
Sbjct: 21 LRIKALEKQIDLYTFMGKMMNCGGYGQCGTCIVEVVEGMENLSPRTDTEKRILKKKPDSY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTMV 88
>gi|428203760|ref|YP_007082349.1| ferredoxin [Pleurocapsa sp. PCC 7327]
gi|427981192|gb|AFY78792.1| ferredoxin [Pleurocapsa sp. PCC 7327]
Length = 98
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N+I++Y GK+ NCGG G CGTCIVEI++G + L+ +T+ ELR LKKKPES+
Sbjct: 21 LREKALQNRIDIYTLKGKLTNCGGYGQCGTCIVEIVEGMENLSPKTDFELRKLKKKPESY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|354565784|ref|ZP_08984958.1| ferredoxin [Fischerella sp. JSC-11]
gi|353548657|gb|EHC18102.1| ferredoxin [Fischerella sp. JSC-11]
Length = 99
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N I++Y +GK+MNCGG G CGTCIVEII+G++ L+ T E R+LKKKP ++
Sbjct: 21 LRQKALENGIDIYKLWGKMMNCGGYGQCGTCIVEIIEGRENLSPPTQAENRFLKKKPANY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTVV 88
>gi|414878388|tpg|DAA55519.1| TPA: hypothetical protein ZEAMMB73_916473, partial [Zea mays]
Length = 559
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/63 (85%), Positives = 59/63 (93%)
Query: 96 IELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155
+ LY + GKVMNCGGGGSCGTCIVEIIDGK+LLNERT+TE RYLKKKP+SWRLACQTIVG
Sbjct: 497 VLLYRSQGKVMNCGGGGSCGTCIVEIIDGKELLNERTSTENRYLKKKPDSWRLACQTIVG 556
Query: 156 NKE 158
NKE
Sbjct: 557 NKE 559
>gi|218247644|ref|YP_002373015.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|257061021|ref|YP_003138909.1| ferredoxin [Cyanothece sp. PCC 8802]
gi|218168122|gb|ACK66859.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|256591187|gb|ACV02074.1| ferredoxin [Cyanothece sp. PCC 8802]
Length = 97
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L NKI++Y GK+ NCGG G CGTCIVEI++G + L+ RT+ E R LKKKP+S+
Sbjct: 20 LREKALQNKIDIYTFKGKLTNCGGYGQCGTCIVEIVEGMENLSPRTDFEQRVLKKKPDSY 79
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 80 RLACQTLV 87
>gi|354555045|ref|ZP_08974348.1| ferredoxin [Cyanothece sp. ATCC 51472]
gi|353553199|gb|EHC22592.1| ferredoxin [Cyanothece sp. ATCC 51472]
Length = 98
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L NK+++Y GK+MNCGG G CGTCIVEI +G + L+ RT+ E R LKKKP+++
Sbjct: 20 LREKALQNKVDIYTLKGKLMNCGGYGQCGTCIVEIAEGMENLSPRTDFEKRVLKKKPDNY 79
Query: 147 RLACQTIV 154
RLACQTIV
Sbjct: 80 RLACQTIV 87
>gi|428776449|ref|YP_007168236.1| ferredoxin [Halothece sp. PCC 7418]
gi|428690728|gb|AFZ44022.1| ferredoxin [Halothece sp. PCC 7418]
Length = 102
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 58/77 (75%), Gaps = 4/77 (5%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N+I+LY GK++NCGG G CGTC+VE+ +G + L+ERT E + LKKKP+++
Sbjct: 21 LREKALENRIDLYTFKGKMLNCGGYGQCGTCVVEVAEGMENLSERTPAEQQKLKKKPDTY 80
Query: 147 RLACQTIVGNKENSGKV 163
RL+CQTIV NSG+V
Sbjct: 81 RLSCQTIV----NSGEV 93
>gi|126656797|ref|ZP_01728011.1| hydrogenase component [Cyanothece sp. CCY0110]
gi|126622017|gb|EAZ92725.1| hydrogenase component [Cyanothece sp. CCY0110]
Length = 103
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L NK+++Y GK+MNCGG G CGTCIVEI +G + L+ RT+ E R LKKKP+++
Sbjct: 25 LREKALQNKVDIYTFKGKLMNCGGYGQCGTCIVEIAEGMENLSPRTDFEKRVLKKKPDNY 84
Query: 147 RLACQTIV 154
RLACQTIV
Sbjct: 85 RLACQTIV 92
>gi|172035808|ref|YP_001802309.1| ferredoxin [Cyanothece sp. ATCC 51142]
gi|171697262|gb|ACB50243.1| probable ferredoxin [Cyanothece sp. ATCC 51142]
Length = 111
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L NK+++Y GK+MNCGG G CGTCIVEI +G + L+ RT+ E R LKKKP+++
Sbjct: 33 LREKALQNKVDIYTLKGKLMNCGGYGQCGTCIVEIAEGMENLSPRTDFEKRVLKKKPDNY 92
Query: 147 RLACQTIV 154
RLACQTIV
Sbjct: 93 RLACQTIV 100
>gi|428778861|ref|YP_007170647.1| ferredoxin [Dactylococcopsis salina PCC 8305]
gi|428693140|gb|AFZ49290.1| ferredoxin [Dactylococcopsis salina PCC 8305]
Length = 102
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 57/74 (77%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N++++Y GK++NCGG G CGTC+VE+++G + L+ERT E + LKKKP+S+
Sbjct: 21 LREKALENRVDIYTFRGKMLNCGGYGQCGTCVVEVVEGMENLSERTPAEQKKLKKKPDSY 80
Query: 147 RLACQTIVGNKENS 160
RL+CQTIV + + S
Sbjct: 81 RLSCQTIVNHGDVS 94
>gi|428210463|ref|YP_007094816.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
gi|428012384|gb|AFY90947.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
Length = 114
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N I+LY T+GK+MNCGG G CGTCIVEI++G + L+ RT E + LKKKP ++
Sbjct: 36 LRIKALENGIDLYTTWGKMMNCGGYGQCGTCIVEIVEGVENLSPRTPVENKKLKKKPANY 95
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 96 RLACQTLV 103
>gi|300865224|ref|ZP_07110041.1| ferredoxin [Oscillatoria sp. PCC 6506]
gi|300336789|emb|CBN55191.1| ferredoxin [Oscillatoria sp. PCC 6506]
Length = 98
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N+++LY GK+MNCGG G CGTCIVEI++G + L+ RT+ E R LKKKP ++
Sbjct: 21 LRLKALENRVDLYTFSGKMMNCGGYGQCGTCIVEIVEGMEHLSPRTDVENRKLKKKPPTY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|427737730|ref|YP_007057274.1| ferredoxin [Rivularia sp. PCC 7116]
gi|427372771|gb|AFY56727.1| ferredoxin [Rivularia sp. PCC 7116]
Length = 98
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N I++Y +GK+MNCGG G CGTCIVEI +G + L+ RT+ E + LKKKPE++
Sbjct: 21 LRLKAIQNNIDIYKVWGKMMNCGGAGQCGTCIVEITEGMENLSPRTDAEKKILKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|334117084|ref|ZP_08491176.1| ferredoxin [Microcoleus vaginatus FGP-2]
gi|333461904|gb|EGK90509.1| ferredoxin [Microcoleus vaginatus FGP-2]
Length = 98
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N+I+LY GK+MNCGG G CGTCIVEI++G + L+ RT+ E R LKKKPE++
Sbjct: 21 LRLKALENRIDLYTFSGKLMNCGGIGQCGTCIVEIVEGSENLSPRTDFENRKLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQ +V
Sbjct: 81 RLACQAMV 88
>gi|255087989|ref|XP_002505917.1| predicted protein [Micromonas sp. RCC299]
gi|226521188|gb|ACO67175.1| predicted protein [Micromonas sp. RCC299]
Length = 151
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 24/155 (15%)
Query: 4 SLNFSANQVSTQPPELCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFI 63
SL+ ++ + +P CL R RRP V + S E +++
Sbjct: 2 SLSIASPASAVRPSIACLSR----------RRP------VGRSSRSQMRVEAASVKVTIT 45
Query: 64 APRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID 123
G+ + V+ A +LR ++LD +LY ++MNCGG G+CGTC+V++++
Sbjct: 46 PSDGGESITTTVDTAS------VLRTVILDTGAQLYGGMDRLMNCGGMGNCGTCLVDVVE 99
Query: 124 GKDLLNERTNTELRYLK--KKPESWRLACQTIVGN 156
G DLL+E+T ELR +K K E WR++CQ +VG
Sbjct: 100 GADLLSEQTEAELRKVKAGKLKEGWRMSCQCLVGG 134
>gi|332712347|ref|ZP_08432274.1| ferredoxin [Moorea producens 3L]
gi|332348821|gb|EGJ28434.1| ferredoxin [Moorea producens 3L]
Length = 109
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ML N+I+LY GK++NCGG G CGTCIVEI+ G + L+ RT E R LKKKP+++
Sbjct: 21 LREKMLQNRIDLYTFRGKLVNCGGYGQCGTCIVEIVAGIENLSPRTEVENRKLKKKPDTY 80
Query: 147 RLACQTIV 154
RLACQ +V
Sbjct: 81 RLACQVLV 88
>gi|428319051|ref|YP_007116933.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
gi|428242731|gb|AFZ08517.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
Length = 98
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N+I+LY GK+MNCGG G CGTCIVEI++G + L+ RT+ E R LKKKPE++
Sbjct: 21 LRLKALENRIDLYTFSGKMMNCGGYGQCGTCIVEIVEGSENLSPRTDFENRKLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQ V
Sbjct: 81 RLACQATV 88
>gi|411119525|ref|ZP_11391905.1| ferredoxin [Oscillatoriales cyanobacterium JSC-12]
gi|410711388|gb|EKQ68895.1| ferredoxin [Oscillatoriales cyanobacterium JSC-12]
Length = 98
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N I++Y GK+MNCGG G CGTC+VE++DG + L+ +T E R LKKKP+S+
Sbjct: 21 LRFKALENGIDIYTLVGKMMNCGGYGQCGTCVVEVVDGIENLSPKTEVEKRKLKKKPDSY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|428305234|ref|YP_007142059.1| ferredoxin [Crinalium epipsammum PCC 9333]
gi|428246769|gb|AFZ12549.1| ferredoxin [Crinalium epipsammum PCC 9333]
Length = 98
Score = 85.9 bits (211), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +L+N I+LY GK+MNCGG G CGTC+VEI++G + L+ RT E LKKKPE++
Sbjct: 21 LREKILENGIDLYTFKGKLMNCGGYGQCGTCVVEIVEGLENLSPRTEFENSKLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQTIV
Sbjct: 81 RLACQTIV 88
>gi|225442545|ref|XP_002284206.1| PREDICTED: uncharacterized protein LOC100241139 [Vitis vinifera]
gi|297743235|emb|CBI36102.3| unnamed protein product [Vitis vinifera]
Length = 191
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 4/164 (2%)
Query: 6 NFSANQVSTQPPELCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAP 65
+FS Q T L+ F SS + K + S ++P E P + F+
Sbjct: 13 SFSLTQNFTSKTHKTLK--PFNPPSSSRPKIKAIGTIPESQSQATPSDEPPSVNFAFVNS 70
Query: 66 RAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGK-VMNCGGGGSCGTCIVEIIDG 124
DG+ V A G+K LR+IMLD+ I+LY Y + ++NCGGGG+CGTCIVE+I+G
Sbjct: 71 VLLPDGTPDVHFRSACGGQK-LRDIMLDSNIDLYGPYARPLLNCGGGGTCGTCIVEVIEG 129
Query: 125 KDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
KDLL RT+ E LK+ P++WRLACQT VG ++ G V + +
Sbjct: 130 KDLLTPRTDKEKEKLKRNPKTWRLACQTTVGKADSRGLVVIQQL 173
>gi|428211944|ref|YP_007085088.1| ferredoxin [Oscillatoria acuminata PCC 6304]
gi|428000325|gb|AFY81168.1| ferredoxin [Oscillatoria acuminata PCC 6304]
Length = 98
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N IELY GK+MNCGG G CGTCIVE+++G + L++RT E + LKKKP S+
Sbjct: 21 LRLKALENGIELYKFVGKLMNCGGYGQCGTCIVEVVEGMENLSDRTPAENQKLKKKPPSY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|416385264|ref|ZP_11684743.1| Ferredoxin [Crocosphaera watsonii WH 0003]
gi|357264902|gb|EHJ13729.1| Ferredoxin [Crocosphaera watsonii WH 0003]
Length = 98
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L NK+++Y GK+MNCGG G CGTC+VEI++G ++ RT+ E R LKKKP+++
Sbjct: 20 LREKALQNKVDIYTFKGKLMNCGGYGQCGTCLVEIVEGMGNVSPRTDFEQRVLKKKPDNY 79
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 80 RLACQTLV 87
>gi|428314377|ref|YP_007125354.1| ferredoxin [Microcoleus sp. PCC 7113]
gi|428255989|gb|AFZ21948.1| ferredoxin [Microcoleus sp. PCC 7113]
Length = 100
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N I+LY GK+MNCGG G CGTCIVE+ DG + L+ RT+ E R LKKKP+++
Sbjct: 21 LREKALQNGIDLYTFTGKMMNCGGYGQCGTCIVEVTDGIENLSPRTDVENRKLKKKPDTY 80
Query: 147 RLACQTIV 154
RLACQ +V
Sbjct: 81 RLACQALV 88
>gi|56750841|ref|YP_171542.1| ferredoxin [Synechococcus elongatus PCC 6301]
gi|81299509|ref|YP_399717.1| ferredoxin [Synechococcus elongatus PCC 7942]
gi|56685800|dbj|BAD79022.1| probable ferredoxin [Synechococcus elongatus PCC 6301]
gi|81168390|gb|ABB56730.1| probable ferredoxin [Synechococcus elongatus PCC 7942]
Length = 144
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N+++LY GK+MNCGG G CGTCIVEI+ G + L+ RT+ E R LK+KP+S+
Sbjct: 21 LRFKAVENQVDLYTFGGKMMNCGGYGQCGTCIVEIVQGAENLSPRTSFEERKLKRKPDSY 80
Query: 147 RLACQTIV 154
RLACQ V
Sbjct: 81 RLACQATV 88
>gi|443329424|ref|ZP_21058010.1| ferredoxin [Xenococcus sp. PCC 7305]
gi|442790976|gb|ELS00477.1| ferredoxin [Xenococcus sp. PCC 7305]
Length = 111
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+NKI++Y GK+ NCGG G CGTC+VEI++G + L+ RT E R LKKKP+S+
Sbjct: 26 LRERALENKIDIYTLKGKLTNCGGYGQCGTCVVEIVEGMENLSPRTAFEQRKLKKKPDSY 85
Query: 147 RLACQTIV 154
RLACQ V
Sbjct: 86 RLACQATV 93
>gi|218440428|ref|YP_002378757.1| ferredoxin [Cyanothece sp. PCC 7424]
gi|218173156|gb|ACK71889.1| ferredoxin [Cyanothece sp. PCC 7424]
Length = 98
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N I++Y GK+ NCGG G CGTCIVEI++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKALQNSIDIYTFKGKLTNCGGYGQCGTCIVEIVEGMENLSPKTDFEQRKLKKKPETY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|427715818|ref|YP_007063812.1| ferredoxin [Calothrix sp. PCC 7507]
gi|427348254|gb|AFY30978.1| ferredoxin [Calothrix sp. PCC 7507]
Length = 98
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N I++Y +GK+ NCGG G CGTCIVE+++G D L+ RT+ E + LKKKPE++
Sbjct: 21 LRLKAIQNGIDIYTIFGKMTNCGGYGQCGTCIVEVVEGIDNLSPRTDVENKKLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|428224568|ref|YP_007108665.1| ferredoxin [Geitlerinema sp. PCC 7407]
gi|427984469|gb|AFY65613.1| ferredoxin [Geitlerinema sp. PCC 7407]
Length = 115
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N I++Y GK+MNCGG G CGTCIVE+++G + L+ RT+ E R L+KK +S+
Sbjct: 35 LRIKALENGIDIYTLMGKMMNCGGYGQCGTCIVEVLEGMENLSPRTDVEDRKLRKKADSY 94
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RLACQ +V +G VC +T
Sbjct: 95 RLACQALV-----NGPVCIKT 110
>gi|113477902|ref|YP_723963.1| ferredoxin [Trichodesmium erythraeum IMS101]
gi|110168950|gb|ABG53490.1| ferredoxin [Trichodesmium erythraeum IMS101]
Length = 102
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N++++Y K+MNCGG G CGTC+VEII+G + L+ RT E + LKK+PE+W
Sbjct: 22 LRLKALENRVDIYTFTAKLMNCGGYGQCGTCVVEIIEGLENLSPRTEVEEKKLKKRPENW 81
Query: 147 RLACQTIV 154
RLACQ +V
Sbjct: 82 RLACQVLV 89
>gi|67925330|ref|ZP_00518686.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|67852829|gb|EAM48232.1| Ferredoxin [Crocosphaera watsonii WH 8501]
Length = 110
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L NK+++Y GK+MNCGG G CGTC+VEI++G ++ RT+ E R LKKKP++
Sbjct: 32 LREKALQNKVDIYTFKGKLMNCGGYGQCGTCLVEIVEGMGNVSPRTDFEQRVLKKKPDNH 91
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 92 RLACQTLV 99
>gi|427708184|ref|YP_007050561.1| ferredoxin [Nostoc sp. PCC 7107]
gi|427360689|gb|AFY43411.1| ferredoxin [Nostoc sp. PCC 7107]
Length = 98
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I+LY +GK+ NCGG G CGTC+VEI++G + L+ RT E R KKKPE++
Sbjct: 21 LRLKAVENGIDLYTLFGKMTNCGGYGQCGTCVVEIVEGLENLSPRTEVENRKFKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTVV 88
>gi|307152058|ref|YP_003887442.1| ferredoxin [Cyanothece sp. PCC 7822]
gi|306982286|gb|ADN14167.1| ferredoxin [Cyanothece sp. PCC 7822]
Length = 98
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N +++Y GK+ NCGG G CGTCIVEI++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKALQNSVDIYTFKGKLTNCGGYGQCGTCIVEIVEGMENLSPKTDFEQRKLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|86607779|ref|YP_476541.1| (Fe-S)-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556321|gb|ABD01278.1| iron-sulfur cluster-binding protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 98
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N+I+LY K++NCGG G CGTC+VEI++G + L+ RT E R LK+KP+S+
Sbjct: 21 LRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGSENLSPRTEAENRKLKRKPDSY 80
Query: 147 RLACQTIV 154
RLACQT V
Sbjct: 81 RLACQTKV 88
>gi|425434873|ref|ZP_18815337.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9432]
gi|425448817|ref|ZP_18828661.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
7941]
gi|440754831|ref|ZP_20934033.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
gi|389675466|emb|CCH95407.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9432]
gi|389768746|emb|CCI06242.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
7941]
gi|440175037|gb|ELP54406.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
Length = 99
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ RT+ E R LKKKPE++
Sbjct: 21 LREKAVQNGVDIYTFSGKLMNCGGYGQCGTCIVAIVEGMENLSARTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTMV 88
>gi|434394461|ref|YP_007129408.1| ferredoxin [Gloeocapsa sp. PCC 7428]
gi|428266302|gb|AFZ32248.1| ferredoxin [Gloeocapsa sp. PCC 7428]
Length = 98
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y YGK+MNCGG G CGTCIVEI G + L+ RT E R LKKKP+++
Sbjct: 21 LRLKAMENGIDIYKFYGKMMNCGGYGQCGTCIVEITQGMENLSPRTEVEDRKLKKKPKNY 80
Query: 147 RLACQTIV 154
RLACQ +V
Sbjct: 81 RLACQALV 88
>gi|428300319|ref|YP_007138625.1| ferredoxin [Calothrix sp. PCC 6303]
gi|428236863|gb|AFZ02653.1| ferredoxin [Calothrix sp. PCC 6303]
Length = 98
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y T+GK+MNCGG G CG C V++IDG + L+ RT+ E + LKKKP+++
Sbjct: 21 LRLKAMENGIDIYKTWGKMMNCGGYGQCGHCAVQVIDGMENLSPRTDAENKLLKKKPDNF 80
Query: 147 RLACQTIV 154
RLACQ+IV
Sbjct: 81 RLACQSIV 88
>gi|42573133|ref|NP_974663.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
gi|332660685|gb|AEE86085.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Arabidopsis thaliana]
Length = 130
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 70/99 (70%), Gaps = 7/99 (7%)
Query: 29 KLSSPRRPKFV------SFAVNSTEPSSPEPEKP-EIELEFIAPRAGDDGSYPVERAKAI 81
K+S R + + S + ++ P P EIELEF P+ G DGSYPV++AKA+
Sbjct: 22 KVSGGGRARVISCNSSSSSSSQASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAV 81
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVE 120
SG+KLLR+IM DNKIELYA YGKVMNCGGGGSCGTCIVE
Sbjct: 82 SGDKLLRSIMQDNKIELYAAYGKVMNCGGGGSCGTCIVE 120
>gi|425469540|ref|ZP_18848466.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9701]
gi|389880592|emb|CCI38670.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9701]
Length = 99
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ RT+ E R LKKKPE++
Sbjct: 21 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGMENLSARTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTMV 88
>gi|37522567|ref|NP_925944.1| ferredoxin [Gloeobacter violaceus PCC 7421]
gi|35213568|dbj|BAC90939.1| gsl2998 [Gloeobacter violaceus PCC 7421]
Length = 98
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 52/69 (75%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+ ML+ +I+LY KV+NCGG G CGTCIV+I+ G + +ERT E + L+KKP +
Sbjct: 20 ILRDAMLEKRIDLYKGMAKVLNCGGVGQCGTCIVDILSGIEHCSERTPVEDQKLRKKPAT 79
Query: 146 WRLACQTIV 154
+RLACQT+V
Sbjct: 80 YRLACQTLV 88
>gi|390438834|ref|ZP_10227269.1| Ferredoxin [Microcystis sp. T1-4]
gi|389837757|emb|CCI31393.1| Ferredoxin [Microcystis sp. T1-4]
Length = 99
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGMENLSAKTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQTIV
Sbjct: 81 RLACQTIV 88
>gi|428771951|ref|YP_007163739.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
gi|428686230|gb|AFZ46090.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
Length = 98
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR N I++Y GK++NCGG G CGTC+VEI++G D L+ +T+ ELR LKKKP+++
Sbjct: 21 LREKAKQNGIDIYRLRGKLINCGGYGQCGTCLVEIVEGMDNLSPKTDFELRKLKKKPDNY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|427714040|ref|YP_007062664.1| ferredoxin [Synechococcus sp. PCC 6312]
gi|427378169|gb|AFY62121.1| ferredoxin [Synechococcus sp. PCC 6312]
Length = 107
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+ I+LY GK+MNC G G CGTCIVEI++G + L+ERT E R LKKKPES+
Sbjct: 30 LRLRALEAGIDLYTLKGKLMNCNGYGQCGTCIVEIVEGMENLSERTPVENRKLKKKPESF 89
Query: 147 RLACQTIV 154
RLACQT V
Sbjct: 90 RLACQTKV 97
>gi|186680809|ref|YP_001864005.1| ferredoxin [Nostoc punctiforme PCC 73102]
gi|186463261|gb|ACC79062.1| ferredoxin [Nostoc punctiforme PCC 73102]
Length = 98
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N I++Y GK+ NCGG G CGTCIVEI++G + L+ RT+ E R KKKPE++
Sbjct: 21 LRLKAMQNDIDIYTFIGKMTNCGGNGQCGTCIVEIVEGLENLSPRTDVENRKFKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|422303428|ref|ZP_16390779.1| Ferredoxin [Microcystis aeruginosa PCC 9806]
gi|389791616|emb|CCI12598.1| Ferredoxin [Microcystis aeruginosa PCC 9806]
Length = 99
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGMENLSVKTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQTIV
Sbjct: 81 RLACQTIV 88
>gi|428219075|ref|YP_007103540.1| ferredoxin [Pseudanabaena sp. PCC 7367]
gi|427990857|gb|AFY71112.1| ferredoxin [Pseudanabaena sp. PCC 7367]
Length = 98
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y GK+ NCGG G CGTCIVEI +G + L+ RTN E R LK+KP+++
Sbjct: 21 LRQKAIENGIDIYKFVGKLTNCGGYGQCGTCIVEINEGMEHLSPRTNAEDRKLKRKPDNY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTMV 88
>gi|86605357|ref|YP_474120.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86553899|gb|ABC98857.1| iron-sulfur cluster-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 98
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N+I+LY K++NCGG G CGTC+VEI++G + L+ RT E R LK+KP+++
Sbjct: 21 LRLKALENQIDLYKMMAKLLNCGGNGQCGTCVVEIVEGAENLSPRTEAENRKLKRKPDTY 80
Query: 147 RLACQTIV 154
RLACQT V
Sbjct: 81 RLACQTKV 88
>gi|209526248|ref|ZP_03274778.1| ferredoxin [Arthrospira maxima CS-328]
gi|376007915|ref|ZP_09785097.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|409994083|ref|ZP_11277204.1| ferredoxin [Arthrospira platensis str. Paraca]
gi|423062812|ref|ZP_17051602.1| ferredoxin [Arthrospira platensis C1]
gi|209493345|gb|EDZ93670.1| ferredoxin [Arthrospira maxima CS-328]
gi|291567887|dbj|BAI90159.1| probable 2Fe-2S ferredoxin [Arthrospira platensis NIES-39]
gi|375323708|emb|CCE20850.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|406715768|gb|EKD10921.1| ferredoxin [Arthrospira platensis C1]
gi|409935075|gb|EKN76618.1| ferredoxin [Arthrospira platensis str. Paraca]
Length = 99
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 52/68 (76%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N+I+LY GK++NCGG G CGTCIVE+++G + L+ +T E R LKKKP+++
Sbjct: 21 LRLKAMENQIDLYTLKGKLLNCGGYGQCGTCIVEVVEGMENLSPKTPVEERMLKKKPDTY 80
Query: 147 RLACQTIV 154
RLACQT V
Sbjct: 81 RLACQTTV 88
>gi|119509735|ref|ZP_01628880.1| Ferredoxin [Nodularia spumigena CCY9414]
gi|119465601|gb|EAW46493.1| Ferredoxin [Nodularia spumigena CCY9414]
Length = 98
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y GK+ NCGG G CGTCIVEI++G + L+ RTN E + KKKP+++
Sbjct: 21 LRLKAMENGIDIYKFIGKMTNCGGAGQCGTCIVEIVEGMENLSPRTNVENQKFKKKPDNY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|425459016|ref|ZP_18838502.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9808]
gi|389823314|emb|CCI28567.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9808]
Length = 99
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGMENLSAKTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTMV 88
>gi|428768942|ref|YP_007160732.1| ferredoxin [Cyanobacterium aponinum PCC 10605]
gi|428683221|gb|AFZ52688.1| ferredoxin [Cyanobacterium aponinum PCC 10605]
Length = 98
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N I++Y GK++NCGG G C TC+VEI++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKALQNNIDIYKWRGKLINCGGYGQCATCVVEIVEGMENLSPKTDFETRKLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|17228379|ref|NP_484927.1| hypothetical protein asl0884 [Nostoc sp. PCC 7120]
gi|17130229|dbj|BAB72841.1| asl0884 [Nostoc sp. PCC 7120]
Length = 98
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +DN +++Y +GK+ NCGG G CGTCIVEI++G + L+ T+ E R LKKKP ++
Sbjct: 21 LRLKAMDNGVDIYKLFGKLTNCGGVGQCGTCIVEIVEGIENLSTPTDVENRMLKKKPANY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|443323311|ref|ZP_21052319.1| ferredoxin [Gloeocapsa sp. PCC 73106]
gi|442787049|gb|ELR96774.1| ferredoxin [Gloeocapsa sp. PCC 73106]
Length = 98
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N I+LY GK+MNCGG G CGTCIVEI+ G + L++ T+ E R LKKKP ++
Sbjct: 21 LREKALQNGIDLYTLKGKLMNCGGYGQCGTCIVEIVAGMENLSDPTDFEKRKLKKKPGNY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|75910684|ref|YP_324980.1| ferredoxin [Anabaena variabilis ATCC 29413]
gi|75704409|gb|ABA24085.1| Ferredoxin [Anabaena variabilis ATCC 29413]
Length = 98
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +DN +++Y +GK+ NCGG G CGTCIVEI++G + L+ T+ E R LKKKP ++
Sbjct: 21 LRLKAMDNGVDIYKFFGKLTNCGGVGQCGTCIVEIVEGIENLSTPTDVENRMLKKKPANY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|15638595|gb|AAL05047.1|AF410434_1 putative [2Fe-2S] ferredoxin [Anabaena variabilis ATCC 29413]
Length = 99
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +DN +++Y +GK+ NCGG G CGTCIVEI++G + L+ T+ E R LKKKP ++
Sbjct: 21 LRLKAMDNGVDIYKFFGKLTNCGGVGQCGTCIVEIVEGIENLSTPTDVENRMLKKKPANY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|443658268|ref|ZP_21132086.1| putative ferredoxin [Microcystis aeruginosa DIANCHI905]
gi|443332930|gb|ELS47510.1| putative ferredoxin [Microcystis aeruginosa DIANCHI905]
Length = 87
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ +T+ E R LKKKPE++
Sbjct: 9 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGLENLSAKTDFEQRCLKKKPENY 68
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 69 RLACQTMV 76
>gi|425445104|ref|ZP_18825142.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9443]
gi|425455367|ref|ZP_18835087.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9807]
gi|159029269|emb|CAO90135.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389734974|emb|CCI01444.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9443]
gi|389803771|emb|CCI17346.1| Genome sequencing data, contig C319 [Microcystis aeruginosa PCC
9807]
Length = 99
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGLENLSAKTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTMV 88
>gi|170078750|ref|YP_001735388.1| putative ferredoxin (2Fe-2S) [Synechococcus sp. PCC 7002]
gi|169886419|gb|ACB00133.1| putative ferredoxin (2Fe-2S) [Synechococcus sp. PCC 7002]
Length = 98
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N ++LY GK+MNCGG G CGTCIVEI++G + L+ +T+ E R LK+KP S+
Sbjct: 21 LREKALQNGVDLYTFGGKLMNCGGVGQCGTCIVEILEGMENLSPKTDFEKRRLKRKPPSY 80
Query: 147 RLACQTI 153
RLACQT+
Sbjct: 81 RLACQTL 87
>gi|434399372|ref|YP_007133376.1| ferredoxin [Stanieria cyanosphaera PCC 7437]
gi|428270469|gb|AFZ36410.1| ferredoxin [Stanieria cyanosphaera PCC 7437]
Length = 98
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N I++Y GK++NCGG G CGTCIVEI++G + L+ +T E R LK+KP+S+
Sbjct: 21 LREKALQNGIDIYTLRGKLVNCGGYGQCGTCIVEIVEGMENLSPKTLFEERKLKRKPDSY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|303275882|ref|XP_003057235.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461587|gb|EEH58880.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 163
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTC 117
+ +EF GD V +A +LR++ L +K++LY K++NCGG G+CGTC
Sbjct: 54 VRVEFTPSDGGDVIVTDVTKAS------VLRDVALGDKVQLYEGMAKLLNCGGMGNCGTC 107
Query: 118 IVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGN 156
V + +G +LL+ RT+ E LK E WRLACQ +VG
Sbjct: 108 KVRVTEGMELLSPRTDAENGKLKGLGEDWRLACQCLVGG 146
>gi|356556426|ref|XP_003546527.1| PREDICTED: uncharacterized protein LOC100820264 [Glycine max]
Length = 194
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 79/120 (65%), Gaps = 10/120 (8%)
Query: 54 EKPEIELEFIA----PRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGK-VMNC 108
E P + L F++ P D + ++ G + LR IMLD+ +ELY Y + ++NC
Sbjct: 59 EPPYVGLVFVSSVLLPDGTPDMHF-----RSACGGQRLRKIMLDSNVELYGPYARPLLNC 113
Query: 109 GGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
GGGG+CGTC+VE+++GK+LLN RT+ E LKKKP++WRLACQTIVG ++ G V + +
Sbjct: 114 GGGGTCGTCMVEVLEGKELLNPRTDKEKEILKKKPKNWRLACQTIVGKPDSRGAVVIQQL 173
>gi|166367272|ref|YP_001659545.1| ferredoxin [Microcystis aeruginosa NIES-843]
gi|425441620|ref|ZP_18821890.1| Ferredoxin [Microcystis aeruginosa PCC 9717]
gi|166089645|dbj|BAG04353.1| ferredoxin [Microcystis aeruginosa NIES-843]
gi|389717599|emb|CCH98322.1| Ferredoxin [Microcystis aeruginosa PCC 9717]
Length = 99
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGMENLSAKTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT V
Sbjct: 81 RLACQTSV 88
>gi|220906296|ref|YP_002481607.1| ferredoxin [Cyanothece sp. PCC 7425]
gi|219862907|gb|ACL43246.1| ferredoxin [Cyanothece sp. PCC 7425]
Length = 98
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 49/68 (72%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+ I++Y GK+ NCGG G CGTCIVE++DG + L++RT E R LK KP ++
Sbjct: 21 LRLKALEAGIDIYTLKGKLFNCGGYGQCGTCIVEVVDGLEHLSDRTEVENRKLKNKPPTY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|440683793|ref|YP_007158588.1| ferredoxin [Anabaena cylindrica PCC 7122]
gi|428680912|gb|AFZ59678.1| ferredoxin [Anabaena cylindrica PCC 7122]
Length = 98
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y GK+ NCGG G CGTCIV++++G + L+ RT+ E R KKKP+++
Sbjct: 21 LRLKAMENNIDIYTLIGKMTNCGGAGQCGTCIVQVVEGLENLSPRTDFENRKFKKKPDNY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|16330969|ref|NP_441697.1| hydrogenase subunit [Synechocystis sp. PCC 6803]
gi|383322711|ref|YP_005383564.1| hydrogenase subunit [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325880|ref|YP_005386733.1| hydrogenase subunit [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491764|ref|YP_005409440.1| hydrogenase subunit [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384437031|ref|YP_005651755.1| hydrogenase subunit [Synechocystis sp. PCC 6803]
gi|451815127|ref|YP_007451579.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|1653463|dbj|BAA18377.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|339274063|dbj|BAK50550.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|359272030|dbj|BAL29549.1| hydrogenase component [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359275200|dbj|BAL32718.1| hydrogenase component [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359278370|dbj|BAL35887.1| hydrogenase component [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407961665|dbj|BAM54905.1| hydrogenase component [Synechocystis sp. PCC 6803]
gi|451781096|gb|AGF52065.1| hydrogenase component [Synechocystis sp. PCC 6803]
Length = 99
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N +++Y GK+MNCGG G CGTCIVEI G + L+ +T+ E R L+KKP+++
Sbjct: 20 LREKALQNGVDIYTLKGKLMNCGGYGQCGTCIVEITAGMENLSPKTDFENRVLRKKPDNF 79
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 80 RLACQTLV 87
>gi|159474836|ref|XP_001695531.1| 2Fe-2S ferredoxin [Chlamydomonas reinhardtii]
gi|158276014|gb|EDP01789.1| 2Fe-2S ferredoxin [Chlamydomonas reinhardtii]
Length = 117
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
SG+KL ++++ NK+ELY T+GKV +CGGGG CGTCIV++ G D+L ERT E + L
Sbjct: 31 SGDKLR-DVLMANKVELYTTWGKVWSCGGGGQCGTCIVDVKSGADILTERTGAEKKKLSG 89
Query: 142 KPESWRLACQTIVGNKENSGKVCSRT 167
KPES+RLACQT+VG+ ENSG V T
Sbjct: 90 KPESFRLACQTLVGDGENSGAVTIAT 115
>gi|427727646|ref|YP_007073883.1| ferredoxin [Nostoc sp. PCC 7524]
gi|427363565|gb|AFY46286.1| ferredoxin [Nostoc sp. PCC 7524]
Length = 98
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y +GK+ NCGG G CGTC+VEI++G + L+ T+ E R LKKKP ++
Sbjct: 21 LRLKAMENGIDIYKFFGKLTNCGGYGQCGTCVVEIVEGVENLSTPTDVENRMLKKKPANY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|22299072|ref|NP_682319.1| ferredoxin [Thermosynechococcus elongatus BP-1]
gi|22295254|dbj|BAC09081.1| tll1529 [Thermosynechococcus elongatus BP-1]
Length = 108
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++ ++LY GK+ NCGG G CGTCIVEI++G + L+ RT E R L++KPE++
Sbjct: 29 LRLKAMEAGVDLYTLKGKLFNCGGYGQCGTCIVEIVEGMEHLSPRTPVEERKLRRKPENY 88
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 89 RLACQTLV 96
>gi|427418499|ref|ZP_18908682.1| ferredoxin [Leptolyngbya sp. PCC 7375]
gi|425761212|gb|EKV02065.1| ferredoxin [Leptolyngbya sp. PCC 7375]
Length = 102
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +DN++++Y GK+MNCGG G CG C+VEI +G D L+ RT E + LKK+P +
Sbjct: 21 LRQKAIDNRVDVYTFTGKMMNCGGYGQCGLCVVEITEGLDNLSPRTAVEEKRLKKRPGNC 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|425463476|ref|ZP_18842813.1| Ferredoxin [Microcystis aeruginosa PCC 9809]
gi|389832414|emb|CCI23991.1| Ferredoxin [Microcystis aeruginosa PCC 9809]
Length = 99
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N +++Y GK+MNCGG G CGTCIV I++G + L+ +T+ E R LKKKPE++
Sbjct: 21 LREKAIQNGVDIYTFGGKLMNCGGYGQCGTCIVAIVEGLENLSVKTDFEQRCLKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT V
Sbjct: 81 RLACQTSV 88
>gi|434386944|ref|YP_007097555.1| ferredoxin [Chamaesiphon minutus PCC 6605]
gi|428017934|gb|AFY94028.1| ferredoxin [Chamaesiphon minutus PCC 6605]
Length = 98
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + N+I++Y GK+MNCGG G CG C+VEI +G + L+ RT+ E R L KKP ++
Sbjct: 21 LREKAVQNQIDIYTFKGKLMNCGGYGQCGMCVVEIAEGMENLSPRTDFENRKLAKKPANY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|443311688|ref|ZP_21041313.1| ferredoxin [Synechocystis sp. PCC 7509]
gi|442778261|gb|ELR88529.1| ferredoxin [Synechocystis sp. PCC 7509]
Length = 99
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 76 ERAKAISGEKL-LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134
E +AI+ + LR ++N I++Y GK+MNCGG G CGTCIV+I +G + L+ +T+
Sbjct: 9 EEKEAIAADGANLRIKAIENGIDIYTLRGKMMNCGGYGQCGTCIVDIAEGLENLSPKTDF 68
Query: 135 ELRYLKKKPESWRLACQTIV 154
E R LKKKP ++RLACQ +V
Sbjct: 69 ENRKLKKKPSTYRLACQALV 88
>gi|427722683|ref|YP_007069960.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427354403|gb|AFY37126.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 106
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L N +++Y K+MNCGG G C TC+VE+++G + L+ RT+ E R LKK+P+++
Sbjct: 24 LREKALQNGVDIYTFGAKLMNCGGVGQCATCMVEVVEGMENLSPRTDFEERRLKKRPDNY 83
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RLACQ+IV +G+V +T
Sbjct: 84 RLACQSIV-----NGRVVVKT 99
>gi|282900000|ref|ZP_06307960.1| Ferredoxin [Cylindrospermopsis raciborskii CS-505]
gi|281195098|gb|EFA70035.1| Ferredoxin [Cylindrospermopsis raciborskii CS-505]
Length = 98
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N I++Y +GK+ NCGG G C TCIVE+ +G + L+ RT+ E R K P+++
Sbjct: 21 LRLKALENGIDIYKLWGKMTNCGGYGQCATCIVEVTEGLENLSSRTDVEKRKFKNSPDTY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|443315840|ref|ZP_21045311.1| ferredoxin [Leptolyngbya sp. PCC 6406]
gi|442784565|gb|ELR94434.1| ferredoxin [Leptolyngbya sp. PCC 6406]
Length = 101
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 47/68 (69%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++ I+LY GK+ NCGG G CGTC+VEI +G + L+ RT E R L+K+PE+
Sbjct: 21 LRFKAMEQGIDLYTFVGKMTNCGGYGQCGTCVVEIAEGMENLSPRTAVEERKLRKRPEAC 80
Query: 147 RLACQTIV 154
RLACQ +V
Sbjct: 81 RLACQVVV 88
>gi|308804377|ref|XP_003079501.1| ferredoxin-related (ISS) [Ostreococcus tauri]
gi|116057956|emb|CAL54159.1| ferredoxin-related (ISS) [Ostreococcus tauri]
Length = 291
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 70 DGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLN 129
DGS +ER I+ ++LR L+ K LY+ + +MNCGG G+C TC V++ G +LL+
Sbjct: 14 DGSSAIERE--ITANEVLRTCALEAKAPLYSGWDSMMNCGGLGNCATCAVDVKRGGELLS 71
Query: 130 ERTNTELRYLK--KKPESWRLACQTIVGNKENSG 161
E T+ E R K K ++WRLACQ +V E +
Sbjct: 72 EETDAEKRKRKAGKLQDTWRLACQCVVKCDEAAA 105
>gi|434405978|ref|YP_007148863.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
gi|428260233|gb|AFZ26183.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
Length = 98
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y K+ NCGG G C TC+VEI++G + L+ RT+ E + KKKPE++
Sbjct: 21 LRLKAIENGIDIYTFLSKMTNCGGYGQCATCVVEIVEGLENLSPRTDVENKKFKKKPENY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|282897090|ref|ZP_06305092.1| Ferredoxin [Raphidiopsis brookii D9]
gi|281197742|gb|EFA72636.1| Ferredoxin [Raphidiopsis brookii D9]
Length = 98
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N I++Y +GK+ NCGG G C TCIVE+ +G + L+ RT+ E R K P ++
Sbjct: 21 LRLKALENGIDIYKLWGKMTNCGGYGQCATCIVEVTEGLENLSSRTDVEKRKFKNSPHTY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|298489968|ref|YP_003720145.1| ferredoxin ['Nostoc azollae' 0708]
gi|298231886|gb|ADI63022.1| ferredoxin ['Nostoc azollae' 0708]
Length = 98
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y GK+ NCGG G C TCIVE+++G + L+ RT+ E R K KP+++
Sbjct: 21 LRLKAIENGIDIYKFLGKMTNCGGYGQCATCIVEVVEGLENLSPRTDFENRKFKNKPDNY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTMV 88
>gi|428223240|ref|YP_007107410.1| ferredoxin [Synechococcus sp. PCC 7502]
gi|427996580|gb|AFY75275.1| ferredoxin [Synechococcus sp. PCC 7502]
Length = 98
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Query: 76 ERAKAISGEKL-LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134
E +AI+ + + LR ++N +++Y GK+ NCGG G CGTC+VEI +G + L+ RT+
Sbjct: 9 ENKEAIAMDGVNLRIKAIENNVDIYKFMGKLTNCGGYGQCGTCVVEITEGIENLSPRTDF 68
Query: 135 ELRYLKKKPESWRLACQTIV 154
E LK+KP+++RLACQ +V
Sbjct: 69 ETFKLKRKPDNYRLACQVVV 88
>gi|414077281|ref|YP_006996599.1| ferredoxin [Anabaena sp. 90]
gi|413970697|gb|AFW94786.1| ferredoxin [Anabaena sp. 90]
Length = 98
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++N I++Y +GK+ NCGG G C TC+V+I +G + L+ RT+ E + K KP+++
Sbjct: 21 LRLKAVENGIDIYKFFGKMTNCGGAGQCTTCVVQITEGLENLSPRTDLETKKFKNKPDNY 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTLV 88
>gi|78185429|ref|YP_377864.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
gi|78169723|gb|ABB26820.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
Length = 163
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID--GKDLLNERTNTELRYLKKKPE 144
LR + L ++ELY G++ NCGG G C TC V ++D D L RT E L+++P+
Sbjct: 26 LREVALRERLELYGLKGQLGNCGGCGQCSTCFVSVVDENNADALTVRTPVEDSKLRRRPQ 85
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLAFLQKEMRVTSLNHSKLP 192
WRLACQ +V E S V +R L + E R+ + + LP
Sbjct: 86 EWRLACQALV---EKSVMVLTRPQMRLP-----EAETRLAAARQAPLP 125
>gi|219124243|ref|XP_002182418.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406379|gb|EEC46319.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 312
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 69 DDGSYPVERAKAISGEKLLRNIM------LDNKIELYATYGKVMNCGGGGSCGTCIVEII 122
DDGS V+ +A++GE L R M D + + NCGG G CGTC+V ++
Sbjct: 189 DDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVL 248
Query: 123 DGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155
G DLLN + + E+ K +P SWR +C+T VG
Sbjct: 249 QGMDLLNPKDSHEVFITKGRPPSWRASCRTTVG 281
>gi|116072658|ref|ZP_01469924.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
gi|116064545|gb|EAU70305.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
Length = 158
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID--GKDLLNERTNTELRYLKKKPE 144
LR + L +ELY G++ NCGG G C TC V ++D D L RT E L+++P+
Sbjct: 21 LREVALRQSLELYGLKGQLGNCGGCGQCSTCFVSVVDENNADALTARTPVEDSKLRRRPQ 80
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLAFLQKEMRVTSLNHSKLP 192
WRLACQ +V E S V +R L E R+ + + LP
Sbjct: 81 EWRLACQALV---EKSVMVLTRPQIRLP-----DAETRLAAARQAPLP 120
>gi|254422452|ref|ZP_05036170.1| 2Fe-2S iron-sulfur cluster binding domain protein [Synechococcus
sp. PCC 7335]
gi|196189941|gb|EDX84905.1| 2Fe-2S iron-sulfur cluster binding domain protein [Synechococcus
sp. PCC 7335]
Length = 139
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +N I++Y GK+ CGG G CGTC+V++I+G L+ R E R LKK+P +
Sbjct: 21 LRFKAQENGIDIYTFMGKLAQCGGYGQCGTCVVDVIEGGHNLSPRNAVEERMLKKRPSTC 80
Query: 147 RLACQTIV 154
RLACQT+V
Sbjct: 81 RLACQTVV 88
>gi|352096611|ref|ZP_08957438.1| ferredoxin [Synechococcus sp. WH 8016]
gi|351676261|gb|EHA59415.1| ferredoxin [Synechococcus sp. WH 8016]
Length = 155
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 17/110 (15%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKKPE 144
LR++ L IELY G++ NCGG G C TC V+++ D L RT E L+++PE
Sbjct: 21 LRDVALRENIELYGLKGQLGNCGGCGQCITCFVDVVGSDADAPLTARTAVEDSKLRRRPE 80
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLAFLQKEMRVTSLNHSKLPSR 194
SWRLACQ +V +++ + ++R+ L+ K+ +R
Sbjct: 81 SWRLACQALVEQ---------------SVIVLTRPQVRLADLDKKKVAAR 115
>gi|224143053|ref|XP_002324835.1| predicted protein [Populus trichocarpa]
gi|222866269|gb|EEF03400.1| predicted protein [Populus trichocarpa]
Length = 55
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%)
Query: 121 IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVC 164
I+D KD+LNER +TELRYLKK PESWR ACQTI NKENSGKV
Sbjct: 3 ILDVKDILNERADTELRYLKKGPESWRPACQTIFENKENSGKVV 46
>gi|427702892|ref|YP_007046114.1| ferredoxin [Cyanobium gracile PCC 6307]
gi|427346060|gb|AFY28773.1| ferredoxin [Cyanobium gracile PCC 6307]
Length = 156
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELRYLKKKPE 144
LR + L IELY G++ NCGG G C TC VE+++G L E+T E L+++P+
Sbjct: 21 LREVALREGIELYGLKGRLGNCGGCGQCITCFVEVVEGGTATALTEQTAVEQLKLRRRPQ 80
Query: 145 SWRLACQTIV 154
SWRLACQ +V
Sbjct: 81 SWRLACQALV 90
>gi|113955411|ref|YP_729761.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9311]
gi|113882762|gb|ABI47720.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9311]
Length = 197
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKKPE 144
LR++ L IELY G++ NCGG G C TC V+++ D L RT E L+++PE
Sbjct: 63 LRDVALRENIELYGLKGQLGNCGGCGQCITCFVDVVGSDADAPLTARTVVEDNKLRRRPE 122
Query: 145 SWRLACQTIV 154
SWRLACQ +V
Sbjct: 123 SWRLACQALV 132
>gi|299470431|emb|CBN80192.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 260
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
KA +G+ L R +L K+E+Y GK+ NC GGG CGTC+V++++ + + R+ E
Sbjct: 174 KAKTGDNL-RKTLLAGKVEVYDMVGKMTNCNGGGQCGTCVVQVVEAEG-WDPRSEWEAGK 231
Query: 139 LKKKPESWRLACQTIV 154
LK +PES RL+CQT++
Sbjct: 232 LKGRPESQRLSCQTVI 247
>gi|443478291|ref|ZP_21068062.1| ferredoxin [Pseudanabaena biceps PCC 7429]
gi|443016435|gb|ELS31096.1| ferredoxin [Pseudanabaena biceps PCC 7429]
Length = 99
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L+N I++Y K+ NC G G C TC VEI++G + L+ RT E + LK KP+++
Sbjct: 21 LRIKALENNIDIYKFVAKLTNCNGYGQCATCTVEIVEGLENLSPRTEFEEKKLKNKPKNY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RLACQT+V N G + +T
Sbjct: 81 RLACQTLV----NQGNISVKT 97
>gi|116075864|ref|ZP_01473123.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
gi|116067179|gb|EAU72934.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
Length = 200
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK--DLLNERTNTELRYLKKKPE 144
LR++ L IELY G++ NC G G C TC VEI G D L+ RT E LK++PE
Sbjct: 58 LRDVALREGIELYGLKGRLGNCNGCGQCITCFVEISGGAGPDSLSPRTAVEDAKLKRRPE 117
Query: 145 SWRLACQTIV 154
WRLACQ +V
Sbjct: 118 DWRLACQALV 127
>gi|87124895|ref|ZP_01080742.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
gi|86167215|gb|EAQ68475.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
Length = 155
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDL--LNERTNTELRYLKKKPE 144
LR++ L I LY G++ NCGG G C TC V++ +G L L+ RT E L+++P+
Sbjct: 21 LRDVALREGIALYGLKGQLGNCGGCGQCITCFVDVQEGGALGALSPRTAVEEAKLRRRPQ 80
Query: 145 SWRLACQTIV 154
SWRLACQT+V
Sbjct: 81 SWRLACQTLV 90
>gi|33866513|ref|NP_898072.1| ferredoxin [Synechococcus sp. WH 8102]
gi|33633291|emb|CAE08496.1| possible ferredoxin [2Fe-2S] [Synechococcus sp. WH 8102]
Length = 153
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID--GKDLLNERTNTELRYLKKKPE 144
LR + L IELY G++ NCGG G C TC V ++D GK L RT E L+++P
Sbjct: 21 LREVALREGIELYGLKGQLGNCGGCGQCITCFVSVVDEGGKKALTARTPVEDNKLRRRPA 80
Query: 145 SWRLACQTIV 154
WRLACQ +V
Sbjct: 81 EWRLACQALV 90
>gi|351726798|ref|NP_001235859.1| uncharacterized protein LOC100500287 [Glycine max]
gi|255629942|gb|ACU15323.1| unknown [Glycine max]
Length = 194
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 45 STEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGK 104
+T+P P P + L F++ DG+ + A G++ LR IMLD+ ++LY Y +
Sbjct: 54 TTDPDEP----PYVGLVFVSSVLLPDGTPDMHFRSACGGQR-LRKIMLDSNVDLYGPYAR 108
Query: 105 -VMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
++NCGGGG+CGTC+VE+++GK+LLN RT+ E + LKKKP++WRLACQT VG ++ G V
Sbjct: 109 PLLNCGGGGTCGTCMVEVLEGKELLNPRTDKEKKILKKKPKNWRLACQTTVGKPDSRGAV 168
Query: 164 CSRTM 168
+ +
Sbjct: 169 VIQQL 173
>gi|78212021|ref|YP_380800.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
gi|78196480|gb|ABB34245.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
Length = 158
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKKPE 144
LR + IELY G++ NCGG G C TC V ++ D D L RT E L+++P+
Sbjct: 21 LREVARREGIELYGLKGQLGNCGGCGQCITCFVSVVDEDNADALTARTAVEDSKLRRRPQ 80
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLAFLQKEMRVTSLNHSKLPS 193
WRLACQ +V E S V +R L + R+ + + LP+
Sbjct: 81 EWRLACQALV---EKSVMVLTRPQVRL-----ANADSRLAAARQAPLPA 121
>gi|260434661|ref|ZP_05788631.1| ferredoxin [Synechococcus sp. WH 8109]
gi|260412535|gb|EEX05831.1| ferredoxin [Synechococcus sp. WH 8109]
Length = 146
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKKPE 144
LR + IELY G++ NCGG G C TC V ++ D D L RT E L+++P+
Sbjct: 9 LREVARREGIELYGLKGQLGNCGGCGQCITCFVSVVDEDNADALTARTAVEDSKLRRRPQ 68
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLAFLQKEMRVTSLNHSKLPS 193
WRLACQ +V E S V +R L + R+ + + LP+
Sbjct: 69 EWRLACQALV---EKSVMVLTRPQVRL-----ANADSRLAAARQAPLPA 109
>gi|254430766|ref|ZP_05044469.1| ferredoxin [Cyanobium sp. PCC 7001]
gi|197625219|gb|EDY37778.1| ferredoxin [Cyanobium sp. PCC 7001]
Length = 174
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK--DLLNERTNTELRYLKKKPE 144
LR + L ++LY G + NCGG G C TC VEI +G L+ RT E + LK++P
Sbjct: 21 LREVALREGVQLYGLKGTLGNCGGCGQCITCFVEIPEGTPGQALSGRTPVEDQKLKRRPG 80
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLAFLQKEMRVTSLNHSKLP 192
WRLACQ +V + S V +R + K+ R+ + S LP
Sbjct: 81 HWRLACQALV---QQSLVVLTRPQ-----VGLADKDTRLVAAMASPLP 120
>gi|91069913|gb|ABE10842.1| putative ferredoxin [uncultured Prochlorococcus marinus clone
ASNC2150]
Length = 120
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ ++LY G + NCGG G C TC + + G KD L+ T+ E LK +PE+
Sbjct: 21 LRELVMKENLQLYGLKGILGNCGGAGQCSTCFISVEGGNKDSLSPLTSVEEEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|148241518|ref|YP_001226675.1| ferredoxin [Synechococcus sp. RCC307]
gi|147849828|emb|CAK27322.1| Ferredoxin [Synechococcus sp. RCC307]
Length = 146
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK--DLLNERTNTELRYLKKKPE 144
LR + L +ELY G++ NCGG G C TC VE++ + L T E + L+++PE
Sbjct: 21 LRELALQEGVELYGLKGRLGNCGGCGQCITCFVEVVAERKEGALTPLTPVEQQKLRRRPE 80
Query: 145 SWRLACQTIV 154
SWRLACQ +V
Sbjct: 81 SWRLACQALV 90
>gi|194477092|ref|YP_002049271.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
gi|171192099|gb|ACB43061.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
Length = 159
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII-----DGKDLLNERTNTELRYLKK 141
LR + L + IELY GK+ NCGG G C TC V+II + L+ RT E L++
Sbjct: 21 LREVALRHGIELYGIKGKLGNCGGCGQCITCFVDIISPHGSNSPSTLSARTQVENMKLRR 80
Query: 142 KPESWRLACQTIV 154
+P++WRL CQ +V
Sbjct: 81 RPDTWRLGCQVLV 93
>gi|317968714|ref|ZP_07970104.1| ferredoxin (2Fe-2S) [Synechococcus sp. CB0205]
Length = 152
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKKPE 144
LR + L +ELY G++ NCGG G C TC V+++ L+ RT E + L+++P+
Sbjct: 21 LREVALREGLELYGLKGQLGNCGGCGQCITCFVDVVGESSPGSLSGRTAVEEQKLRRRPQ 80
Query: 145 SWRLACQTIV 154
+WRLACQT+V
Sbjct: 81 TWRLACQTLV 90
>gi|412987640|emb|CCO20475.1| unknown protein [Bathycoccus prasinos]
Length = 154
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTC-IVEIIDGKDLLNERTNTELRYL- 139
S +LRN+ L+N +E+Y + K++NCGG G CGTC ++ DGKD+L+ T E + L
Sbjct: 58 SSSGILRNLALENNVEIYEGFNKLLNCGGNGQCGTCGMIITTDGKDVLSAPTEVERKKLG 117
Query: 140 -KKKPESWRLACQT 152
K + +RL+CQT
Sbjct: 118 EAKLNKGYRLSCQT 131
>gi|124023904|ref|YP_001018211.1| ferredoxin [Prochlorococcus marinus str. MIT 9303]
gi|123964190|gb|ABM78946.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9303]
Length = 125
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKD---LLNERTNTELRYLKKKP 143
LR + L +ELY GK+ NCGG G C TC V I+G+ L+ RT E LK++P
Sbjct: 26 LREVALREGMELYGLKGKLGNCGGCGQCITCFVG-IEGESKVGALSPRTEVEEIKLKRRP 84
Query: 144 ESWRLACQTIV 154
E+WRLACQTIV
Sbjct: 85 ENWRLACQTIV 95
>gi|33863931|ref|NP_895491.1| ferredoxin [Prochlorococcus marinus str. MIT 9313]
gi|33635515|emb|CAE21839.1| Ferredoxin [Prochlorococcus marinus str. MIT 9313]
Length = 129
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKD---LLNERTNTELRYLKKKP 143
LR + L +ELY GK+ NCGG G C TC V I+G+ L+ RT E LK++P
Sbjct: 30 LREVALREGMELYGLKGKLGNCGGCGQCITCFVG-IEGESKVGALSPRTEVEEIKLKRRP 88
Query: 144 ESWRLACQTIV 154
E+WRLACQTIV
Sbjct: 89 ENWRLACQTIV 99
>gi|87300979|ref|ZP_01083821.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
gi|87284850|gb|EAQ76802.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
Length = 157
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKKPE 144
LR + L +ELY G++ NCGG G C TC V+++ L RT E R L+++P+
Sbjct: 21 LREVALREGLELYGLKGQLGNCGGCGQCITCFVDVVAEASPGALTPRTAVEDRKLRRRPD 80
Query: 145 SWRLACQTIV 154
WRLACQ +V
Sbjct: 81 GWRLACQALV 90
>gi|254431333|ref|ZP_05045036.1| iron-sulfur cluster-binding protein [Cyanobium sp. PCC 7001]
gi|197625786|gb|EDY38345.1| iron-sulfur cluster-binding protein [Cyanobium sp. PCC 7001]
Length = 119
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD I Y + V NCGG G CGTC++E+++G L+ R++ E YL +P S+
Sbjct: 21 LRKAALDAGINPYKGFNNVNNCGGLGQCGTCVMEVLEGMQNLSPRSDVEEVYLADRPASY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTVRT 96
>gi|91070578|gb|ABE11481.1| putative ferredoxin [uncultured Prochlorococcus marinus clone
HOT0M-7C8]
Length = 120
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLKKKPES 145
LR +++ ++LY GK+ NCGG G C TC + + G + L+ T+ E LK +PE+
Sbjct: 21 LRELVMRENLQLYGLKGKLGNCGGAGQCSTCFISVEGGNINSLSPLTSVEEEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|148238855|ref|YP_001224242.1| ferredoxin [Synechococcus sp. WH 7803]
gi|147847394|emb|CAK22945.1| Ferredoxin [Synechococcus sp. WH 7803]
Length = 161
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDL---LNERTNTELRYLKKKP 143
LR++ L I+LY G++ NCGG G C TC VE+ + L RT E L+++P
Sbjct: 21 LRDVALREGIQLYGLKGQLGNCGGCGQCITCFVEVKGDQTAAASLTGRTAVEEAKLRRRP 80
Query: 144 ESWRLACQTIV 154
+SWRLACQ +V
Sbjct: 81 DSWRLACQALV 91
>gi|318042633|ref|ZP_07974589.1| ferredoxin (2Fe-2S) [Synechococcus sp. CB0101]
Length = 213
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKKPE 144
LR + L I LY G++ NCGG G C TC V+++ L+ RT E + L+++P+
Sbjct: 78 LREVALREGIALYGLKGQLGNCGGCGQCITCFVDVVGESSPGSLSGRTAVEDQKLRRRPQ 137
Query: 145 SWRLACQTIV 154
+WRLACQT+V
Sbjct: 138 TWRLACQTLV 147
>gi|123967877|ref|YP_001008735.1| ferredoxin [Prochlorococcus marinus str. AS9601]
gi|123197987|gb|ABM69628.1| possible ferredoxin [Prochlorococcus marinus str. AS9601]
Length = 120
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ ++LY G + NCGG G C TC + + G K+ L+ T+ E LK +PE+
Sbjct: 21 LRELVMKENLQLYGLKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|91070125|gb|ABE11049.1| putative ferredoxin [uncultured Prochlorococcus marinus clone
ASNC729]
Length = 120
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ ++LY G + NCGG G C TC + + G K+ L+ T+ E LK +PE+
Sbjct: 21 LRELVMKENLQLYGLKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|78185229|ref|YP_377664.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
gi|78169523|gb|ABB26620.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9902]
Length = 128
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135
E+ I G L R LD I Y + + NC G G CGTC++E+++G+D L+ R++ E
Sbjct: 20 EQVGCIEGANL-RRASLDAGINPYKSLNNLNNCSGVGQCGTCVMEVVEGQDNLSPRSDVE 78
Query: 136 LRYLKKKPESWRLACQTIV 154
YL +P ++RL+C+T V
Sbjct: 79 EVYLADRPANFRLSCRTTV 97
>gi|78778707|ref|YP_396819.1| ferredoxin-like [Prochlorococcus marinus str. MIT 9312]
gi|78712206|gb|ABB49383.1| ferredoxin-like protein [Prochlorococcus marinus str. MIT 9312]
Length = 120
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ ++LY G + NCGG G C TC + + G K+ L+ T+ E LK +PE+
Sbjct: 21 LRELVIKENLQLYGLKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|126695679|ref|YP_001090565.1| ferredoxin [Prochlorococcus marinus str. MIT 9301]
gi|126542722|gb|ABO16964.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9301]
Length = 120
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ ++LY G + NCGG G C TC + + G K+ L+ T+ E LK +PE+
Sbjct: 21 LRELVMRENLQLYGLKGILGNCGGAGQCSTCFISVEGGNKNSLSPLTSVEEEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|123965583|ref|YP_001010664.1| ferredoxin [Prochlorococcus marinus str. MIT 9515]
gi|123199949|gb|ABM71557.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9515]
Length = 120
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ K++LY G + NCGG G C TC + + G K+ L+ T E LK +PE+
Sbjct: 21 LRELVIKEKLQLYGLKGLLGNCGGVGQCSTCFISLEGGTKNSLSPITAVEQEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|88807800|ref|ZP_01123311.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
gi|88787839|gb|EAR18995.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
Length = 162
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNE---RTNTELRYLKKKP 143
LR++ L I+LY G++ NCGG G C TC VE+ + N RT E L+++P
Sbjct: 21 LRDVALREGIQLYGLKGQLGNCGGCGQCITCFVEVKGDQAAANSLSGRTAVEDSKLRRRP 80
Query: 144 ESWRLACQTIV 154
SWRLACQ +V
Sbjct: 81 GSWRLACQALV 91
>gi|427701407|ref|YP_007044629.1| ferredoxin [Cyanobium gracile PCC 6307]
gi|427344575|gb|AFY27288.1| ferredoxin [Cyanobium gracile PCC 6307]
Length = 120
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD + Y + NCGG G CGTC+VE+++G L+ R++ E YL +P S+
Sbjct: 21 LRKAALDAGVNPYTGLNNLNNCGGLGQCGTCVVEVVEGARNLSPRSDVEEVYLADRPASY 80
Query: 147 RLACQTIV 154
RL+C+T V
Sbjct: 81 RLSCRTTV 88
>gi|317969635|ref|ZP_07971025.1| ferredoxin [Synechococcus sp. CB0205]
Length = 154
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 51 PEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGG 110
P P P I E + G I G L R +D + Y + NCGG
Sbjct: 32 PRPTVPTIRFEKEGQQVG-----------CIEGANL-RKAAVDAGVNPYGGLNNLNNCGG 79
Query: 111 GGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRT 167
G CGTC+VE+++G L+ R++ E YL +P ++RL+C+T V +G V RT
Sbjct: 80 VGQCGTCVVEVVEGMQNLSPRSDVEQVYLADRPANYRLSCRTSV-----NGDVTVRT 131
>gi|148238961|ref|YP_001224348.1| ferredoxin [Synechococcus sp. WH 7803]
gi|147847500|emb|CAK23051.1| Ferredoxin [Synechococcus sp. WH 7803]
Length = 119
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD+ I Y + NCGG G CGTC+VE+++G L+ R++ E YL +P ++
Sbjct: 21 LRKAALDSGINPYKGLNNLNNCGGVGQCGTCVVEVLEGSQNLSPRSDVEEVYLADRPANY 80
Query: 147 RLACQTIV 154
RL+C+T V
Sbjct: 81 RLSCRTSV 88
>gi|87302629|ref|ZP_01085446.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
gi|87282973|gb|EAQ74930.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 5701]
Length = 120
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD I Y + NCGG G CGTC+VE+++G L+ R++ E YL +P ++
Sbjct: 21 LRQAALDAGINPYKGLNNLNNCGGLGQCGTCVVEVLEGAQNLSPRSDVEQVYLSDRPANY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTIRT 96
>gi|33239808|ref|NP_874750.1| ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237334|gb|AAP99402.1| Ferredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 130
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR + L +ELY GK+ NCGG G C TC V + +G +D L+ T+ E L+ +P +
Sbjct: 31 LREVALREGLELYGFKGKLGNCGGYGQCITCYVSVAEGQQDSLSPITDIEQTKLRGRPGN 90
Query: 146 WRLACQTIV 154
WRLACQ +V
Sbjct: 91 WRLACQAVV 99
>gi|157412678|ref|YP_001483544.1| ferredoxin [Prochlorococcus marinus str. MIT 9215]
gi|157387253|gb|ABV49958.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9215]
Length = 120
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ K++LY G + NC G G C TC V I G K+ L+ T E LK +PE+
Sbjct: 21 LRELIIREKLQLYGLKGLLGNCNGAGQCSTCFVSIEGGNKNSLSPLTFVEEEKLKNRPEN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|194477324|ref|YP_002049503.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
gi|171192331|gb|ACB43293.1| possible ferredoxin (2Fe-2S) [Paulinella chromatophora]
Length = 120
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD I Y + NCGG G CGTC+VE+I+G L+ R++ E YL +P ++
Sbjct: 21 LRKAALDAGINPYKGLNNLNNCGGVGQCGTCVVEVIEGVRNLSPRSDVEEVYLADRPANY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTVRT 96
>gi|87123893|ref|ZP_01079743.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
gi|86168462|gb|EAQ69719.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9917]
Length = 119
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD I Y + NCGG G CGTC+VE+++G L+ R++ E YL +P ++
Sbjct: 21 LRKAALDAGINPYKGLNNLNNCGGVGQCGTCVVEVLEGAQNLSPRSDVEEVYLADRPANY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTVRT 96
>gi|219119177|ref|XP_002180355.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408612|gb|EEC48546.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 356
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 34 RRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLD 93
R+PK +N T PE +P+++LE A + + L++ + L+
Sbjct: 233 RKPK-----INLTLQYPPEMNEPDVKLELFA-------------GENLRRSMLVKGVKLN 274
Query: 94 NKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153
+ + G + +CG G+C TC V+I+ G +L N R E + L K+ +WR++C+TI
Sbjct: 275 DALSRRFDSGGIGDCGAEGTCATCAVKIVQGGNLCNPRAQQEAQILVKRA-NWRMSCKTI 333
Query: 154 VGNKENSGKVCSRT 167
VG G + R
Sbjct: 334 VGYGMKEGSMTVRV 347
>gi|318041150|ref|ZP_07973106.1| ferredoxin [Synechococcus sp. CB0101]
Length = 119
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +D I Y + NCGG G CGTC+VE+++G L+ R++ E YL +P ++
Sbjct: 21 LRKAAIDAGINPYKGLNNLNNCGGVGQCGTCVVEVVEGMQNLSPRSDVEQVYLADRPANY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTVRT 96
>gi|148241970|ref|YP_001227127.1| ferredoxin [Synechococcus sp. RCC307]
gi|147850280|emb|CAK27774.1| Ferredoxin [Synechococcus sp. RCC307]
Length = 122
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD + Y + NCGG G CGTC++E+++G + L+ R++ E YL +P ++
Sbjct: 21 LRKAALDAGVNPYQGLNNLNNCGGVGQCGTCVMEVVEGMENLSPRSDVEEVYLADRPATY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTVRT 96
>gi|428220662|ref|YP_007104832.1| ferredoxin [Synechococcus sp. PCC 7502]
gi|427994002|gb|AFY72697.1| ferredoxin [Synechococcus sp. PCC 7502]
Length = 91
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 104 KVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
K+ NCGG G CGTC+VEI G + L+ RT+ E K+KP+++RLACQ +V
Sbjct: 20 KLTNCGGYGQCGTCVVEITKGIENLSPRTDFETFKFKRKPDNYRLACQVVV 70
>gi|116072893|ref|ZP_01470158.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
gi|116064419|gb|EAU70180.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. BL107]
Length = 119
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135
E+ I G L R LD I Y + + NC G G CGTC++E+++G++ L+ R++ E
Sbjct: 11 EQVGCIEGANL-RRASLDAGINPYKSLNNLNNCSGVGQCGTCVMEVVEGQENLSPRSDVE 69
Query: 136 LRYLKKKPESWRLACQTIV 154
YL +P ++RL+C+T V
Sbjct: 70 EVYLADRPANFRLSCRTTV 88
>gi|33860874|ref|NP_892435.1| ferredoxin [Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633816|emb|CAE18775.1| possible ferredoxin [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 120
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR +++ K++LY G + NCGG G C TC V + G K+ L+ T+ E L +P++
Sbjct: 21 LRELVIREKLQLYGLKGILGNCGGVGQCSTCFVSVEGGAKNSLSPLTSVEEEKLNNRPDN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|113955075|ref|YP_731220.1| (Fe-S)-binding protein [Synechococcus sp. CC9311]
gi|113882426|gb|ABI47384.1| iron-sulfur cluster-binding protein [Synechococcus sp. CC9311]
Length = 119
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L + + Y + + NCGG G CGTC++E+++G L+ R++ E YL +P ++
Sbjct: 21 LRKAALSSGVNPYKGFNNLNNCGGVGQCGTCVIEVLEGAQNLSPRSDVEEVYLSDRPANY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTVRT 96
>gi|422293297|gb|EKU20597.1| hypothetical protein NGA_0602310 [Nannochloropsis gaditana CCMP526]
Length = 330
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK-KPESWRLACQTIVGNKENSGKVCS 165
NCGG G CGTC+V++++GK+LLNE+ E +K +WRL+C+ IVG G V
Sbjct: 258 NCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGAANWRLSCRVIVGATNTPGTVRF 317
Query: 166 RTM 168
+ M
Sbjct: 318 KLM 320
>gi|254525580|ref|ZP_05137632.1| ferredoxin [Prochlorococcus marinus str. MIT 9202]
gi|221537004|gb|EEE39457.1| ferredoxin [Prochlorococcus marinus str. MIT 9202]
Length = 120
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNERTNTELRYLKKKPES 145
LR++++ K++LY G + NC G G C TC + G K+ L+ T E LK +P++
Sbjct: 21 LRDLIIREKLQLYGLKGLLGNCNGAGQCSTCFISFEGGNKNSLSPLTFVEEEKLKNRPQN 80
Query: 146 WRLACQTIV 154
WRLACQT++
Sbjct: 81 WRLACQTLI 89
>gi|116075304|ref|ZP_01472564.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
gi|116067501|gb|EAU73255.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. RS9916]
Length = 119
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L I Y + NCGG G CGTC+VE+++G L+ R++ E YL +P ++
Sbjct: 21 LRKAALSAGINPYKGLNNLNNCGGVGQCGTCVVEVVEGAQNLSPRSDVEEVYLADRPANY 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTSV-----NGDVTVRT 96
>gi|224003811|ref|XP_002291577.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973353|gb|EED91684.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 318
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++ DN I +Y ++ + NC G CGTCIV I +G N ++ E L++ PES+
Sbjct: 232 LRQVLTDNGINVYQSFTRWTNCKGKQLCGTCIVNIANGSGDTNRKSLDEASTLRENPESY 291
Query: 147 RLACQTI 153
RL+C T
Sbjct: 292 RLSCVTF 298
>gi|88807672|ref|ZP_01123184.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
gi|88788886|gb|EAR20041.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. WH 7805]
Length = 119
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L + I Y + NCGG G CGTC+VE+++G L+ R++ E YL +P ++
Sbjct: 21 LRKAALASGINPYKGLNNLNNCGGVGQCGTCVVEVLEGSQNLSPRSDVEEVYLSDRPANY 80
Query: 147 RLACQTIV 154
RL+C+T V
Sbjct: 81 RLSCRTSV 88
>gi|33866300|ref|NP_897859.1| ferredoxin [Synechococcus sp. WH 8102]
gi|33639275|emb|CAE08283.1| possible ferredoxin [2Fe-2S] [Synechococcus sp. WH 8102]
Length = 119
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD I Y + NC G G CGTC++E+++G+ L+ R++ E YL +P ++
Sbjct: 21 LRKAALDAGINPYNGVNNLNNCSGVGQCGTCVMEVVEGQANLSPRSDVEEVYLADRPANF 80
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 81 RLSCRTTV-----NGDVTVRT 96
>gi|260435553|ref|ZP_05789523.1| ferredoxin [Synechococcus sp. WH 8109]
gi|260413427|gb|EEX06723.1| ferredoxin [Synechococcus sp. WH 8109]
Length = 132
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD + Y + + NC G G CGTC++E+++G+ L+ R++ E YL +P ++
Sbjct: 34 LRKAALDAGVNPYKSLNNLNNCSGVGQCGTCVMEVLEGQANLSPRSDVEEVYLADRPANF 93
Query: 147 RLACQTIVGNKENSGKVCSRT 167
RL+C+T V +G V RT
Sbjct: 94 RLSCRTTV-----NGDVTVRT 109
>gi|352094742|ref|ZP_08955913.1| ferredoxin [Synechococcus sp. WH 8016]
gi|351681082|gb|EHA64214.1| ferredoxin [Synechococcus sp. WH 8016]
Length = 119
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR L + I Y + NCGG G CGTC++E+++G L+ R++ E YL +P ++
Sbjct: 21 LRKAALSSGINPYKGLNNLNNCGGVGQCGTCVIEVLEGAQNLSPRSDVEEVYLSDRPANY 80
Query: 147 RLACQTIV 154
RL+C+T V
Sbjct: 81 RLSCRTSV 88
>gi|78212246|ref|YP_381025.1| ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
gi|78196705|gb|ABB34470.1| possible ferredoxin (2Fe-2S) [Synechococcus sp. CC9605]
Length = 132
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR LD + Y + + NC G G CGTC++E+++G+ L+ R++ E YL +P ++
Sbjct: 34 LRKAALDAGVNPYKSLNNLNNCSGVGQCGTCVMEVLEGQANLSPRSDVEEVYLADRPANF 93
Query: 147 RLACQTIV 154
RL+C+T V
Sbjct: 94 RLSCRTTV 101
>gi|224010703|ref|XP_002294309.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970326|gb|EED88664.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 334
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
L R I L++K+ G +CG G+C TC+V + G +LL+ TE + L KKP
Sbjct: 247 LTRGIKLNDKLSERFDSGGTGDCGADGTCATCVVSVTKGGELLSPMKMTESQILSKKPR- 305
Query: 146 WRLACQTIVG 155
WR+AC+T+VG
Sbjct: 306 WRMACKTVVG 315
>gi|159902892|ref|YP_001550236.1| ferredoxin [Prochlorococcus marinus str. MIT 9211]
gi|159888068|gb|ABX08282.1| possible ferredoxin [Prochlorococcus marinus str. MIT 9211]
Length = 120
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI-IDGKDLLNERTNTELRYLKKKPES 145
LR + L ++LY G + NCGG G C TC V + GKD L+ T E L +P++
Sbjct: 21 LREVALKEGLQLYGLKGVLGNCGGCGQCITCFVSVEGGGKDSLSPLTEVENAKLSNRPKN 80
Query: 146 WRLACQTIV 154
WRL+CQ +V
Sbjct: 81 WRLSCQCLV 89
>gi|299472521|emb|CBN77306.1| Ferredoxin [Ectocarpus siliculosus]
Length = 337
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 99 YATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGN 156
YAT NC G G+CGTC VE+ G DLL EL L + P WRL+C+ IVG
Sbjct: 259 YATG----NCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGK 314
Query: 157 KENSGKV 163
+ +G V
Sbjct: 315 ENKAGTV 321
>gi|219123585|ref|XP_002182103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406704|gb|EEC46643.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
+R + +DN I +Y + + NC G CGTCIV + DG N ++ E L++ P+S+
Sbjct: 218 VRELCVDNGINVYQSVTRWTNCKGKQLCGTCIVNVSDGAIQTNRKSMDEDSTLRENPDSY 277
Query: 147 RLACQTI 153
RL+C T
Sbjct: 278 RLSCVTF 284
>gi|397576439|gb|EJK50260.1| hypothetical protein THAOC_30796, partial [Thalassiosira oceanica]
Length = 267
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A++G + R ++DN I +Y + + NC G CGTCIV + +G N ++ E
Sbjct: 174 QAMAGANV-RQTLVDNGINVYQSVTRWTNCKGKQLCGTCIVNVKEGGADTNRKSIDESST 232
Query: 139 LKKKPESWRLACQTI 153
L++ PES+RL+C T
Sbjct: 233 LRENPESYRLSCVTF 247
>gi|414590283|tpg|DAA40854.1| TPA: hypothetical protein ZEAMMB73_132806 [Zea mays]
Length = 165
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 34/43 (79%)
Query: 121 IIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
+++GK++L+ +T E LK+KP++WRLACQ VGN +++G++
Sbjct: 108 VVEGKEMLSPKTEVEKELLKRKPKTWRLACQATVGNADSTGQM 150
>gi|428213977|ref|YP_007087121.1| ferredoxin [Oscillatoria acuminata PCC 6304]
gi|428002358|gb|AFY83201.1| ferredoxin [Oscillatoria acuminata PCC 6304]
Length = 112
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++LDN I+LY K++NC G GSCGTC VEI N R T P ++
Sbjct: 19 LRQVLLDNGIDLYNGKAKLINCRGLGSCGTCAVEIEGEISAPNWRDRTRRSLPPHSPAKN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|219128739|ref|XP_002184563.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404013|gb|EEC43962.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 357
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVM------NC 108
KP++ ++ P + +D E + +GE L R ML ++L K NC
Sbjct: 238 KPKVTIKLQYPPSQEDAED--ETIELFAGENL-RQGMLIRGVKLNDPLAKRFDSKNGGNC 294
Query: 109 GGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRT 167
G GG C TC V + G +LLN + E + L P WRLAC+ IVG G++ R
Sbjct: 295 GAGGLCRTCSVSVTSGINLLNPQRLAEKQMLADNPR-WRLACKAIVGFGMQEGEMTVRV 352
>gi|311748253|ref|ZP_07722038.1| ferredoxin, 2Fe-2S [Algoriphagus sp. PR1]
gi|126576747|gb|EAZ80995.1| ferredoxin, 2Fe-2S [Algoriphagus sp. PR1]
Length = 106
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQTIVGN 156
Y + CGG C TC VE+++GKD L E T+ EL L+ PE + RLACQ +G+
Sbjct: 35 YPVLATCGGMALCATCHVEVLEGKDELGEATDMELDQLENLPEYYPTSRLACQIRIGD 92
>gi|414878387|tpg|DAA55518.1| TPA: hypothetical protein ZEAMMB73_916473 [Zea mays]
Length = 553
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 42/46 (91%)
Query: 96 IELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+ LY + GKVMNCGGGGSCGTCIVEIIDGK+LLNERT+TE RYLKK
Sbjct: 497 VLLYRSQGKVMNCGGGGSCGTCIVEIIDGKELLNERTSTENRYLKK 542
>gi|219113233|ref|XP_002186200.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583050|gb|ACI65670.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 259
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 87 LRNIMLDNKIELY-ATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
LR ++LDN +E+Y K+ NCGGGG C C + +D + ER++ E + LKK P++
Sbjct: 182 LRQVLLDNSVEVYQGMKQKLGNCGGGGQCTFCAFDFVDSEG-WAERSDYESQKLKKNPDA 240
Query: 146 WRLAC 150
RL C
Sbjct: 241 -RLTC 244
>gi|159898027|ref|YP_001544274.1| guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
gi|159891066|gb|ABX04146.1| adenylate/guanylate cyclase [Herpetosiphon aurantiacus DSM 785]
Length = 561
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES--WRLACQTI 153
+CGG G C TC +EII+G LN T TELR LK+ S RLACQTI
Sbjct: 286 SCGGRGRCSTCRIEIIEGVKALNPPTETELRLLKRFGASGDIRLACQTI 334
>gi|434406478|ref|YP_007149363.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
gi|428260733|gb|AFZ26683.1| ferredoxin [Cylindrospermum stagnale PCC 7417]
Length = 113
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR I+L N I+LY KV+NC G GSCGTC V++ N R T P S
Sbjct: 19 LRKILLHNGIDLYNGNAKVINCRGIGSCGTCAVKVEGEVSAANWRDKTRRSLPPHSPTSD 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTEV 87
>gi|440748303|ref|ZP_20927557.1| Ferredoxin, 2Fe-2S [Mariniradius saccharolyticus AK6]
gi|436483507|gb|ELP39561.1| Ferredoxin, 2Fe-2S [Mariniradius saccharolyticus AK6]
Length = 107
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQTIVG 155
Y + CGG C TC VEI++GKD L + T+TEL L+ PE + RL+CQ +G
Sbjct: 35 YPILATCGGMALCATCHVEILEGKDGLGDATDTELDQLENLPEYFPTSRLSCQIRIG 91
>gi|147838870|emb|CAN70335.1| hypothetical protein VITISV_011434 [Vitis vinifera]
Length = 159
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 35 RPKFVSFAV--NSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIML 92
RPK + S ++P E P + F+ DG+ V A G+KL R+IML
Sbjct: 38 RPKIKAIGTIPESQSQATPSDEPPSVNFAFVNSVLLPDGTPDVHFRSACGGQKL-RDIML 96
Query: 93 DNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
D+ I+LY Y ++++ +I+GK+LL RT+ E LK+
Sbjct: 97 DSNIDLYGPYVRILDS----------YTVIEGKELLTPRTDKEKEKLKR 135
>gi|119494564|ref|ZP_01624702.1| hypothetical protein L8106_18037 [Lyngbya sp. PCC 8106]
gi|119452096|gb|EAW33306.1| hypothetical protein L8106_18037 [Lyngbya sp. PCC 8106]
Length = 111
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR ++L N I+LY V+NC G G+CGTC VEI L R T L P+ S
Sbjct: 19 LRQVLLKNGIDLYNGQASVINCRGLGTCGTCAVEIEGEVSELQWREKTRLSLPPHSPQTS 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|440680602|ref|YP_007155397.1| ferredoxin [Anabaena cylindrica PCC 7122]
gi|428677721|gb|AFZ56487.1| ferredoxin [Anabaena cylindrica PCC 7122]
Length = 112
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++L+N I+LY K++NC G GSCGTC V++ N R T P S
Sbjct: 19 LRKVLLENGIDLYNGGSKLINCRGIGSCGTCAVKVEGEVSAANWRDQTRRSLPPHSPTSN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|343085889|ref|YP_004775184.1| ferredoxin [Cyclobacterium marinum DSM 745]
gi|342354423|gb|AEL26953.1| ferredoxin [Cyclobacterium marinum DSM 745]
Length = 106
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQTIVGNK 157
Y + CGG C TC VE+++GKD L + T+ EL L+ PE + RLACQ + ++
Sbjct: 35 YPVLATCGGMALCATCHVEVLEGKDGLGDATDVELDQLEALPEYYPTSRLACQVRISDE 93
>gi|443669526|ref|ZP_21134738.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa DIANCHI905]
gi|159026274|emb|CAO88850.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330200|gb|ELS44936.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa DIANCHI905]
Length = 110
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR I+L + I LY K++NC G GSCGTC V I+ +N R L P+ S
Sbjct: 19 LRRILLKHDISLYNGGSKLINCRGIGSCGTCAVAIVGEVSAINWREKARLSLPPHNPDNS 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|428306522|ref|YP_007143347.1| ferredoxin [Crinalium epipsammum PCC 9333]
gi|428248057|gb|AFZ13837.1| ferredoxin [Crinalium epipsammum PCC 9333]
Length = 112
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++L N I++Y KV+NC G G+CGTC V++ + ++E + TE LK P S
Sbjct: 19 LRQVLLTNGIDVYNGKAKVINCTGIGTCGTCAVQV---EGEVSEASWTEKTRLKLPPHSP 75
Query: 146 ---WRLACQTIV 154
RL+CQT V
Sbjct: 76 KQNRRLSCQTQV 87
>gi|431799955|ref|YP_007226859.1| ferredoxin [Echinicola vietnamensis DSM 17526]
gi|430790720|gb|AGA80849.1| ferredoxin [Echinicola vietnamensis DSM 17526]
Length = 106
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQTIVGNK 157
Y + CGG C TC VE++ GKD L E T+ EL L+ PE + RLACQ + ++
Sbjct: 35 YPVLATCGGMALCATCHVEVLGGKDGLGEATDVELDQLEALPEMYDTSRLACQIRISDE 93
>gi|404450875|ref|ZP_11015852.1| ferredoxin [Indibacter alkaliphilus LW1]
gi|403763537|gb|EJZ24492.1| ferredoxin [Indibacter alkaliphilus LW1]
Length = 106
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQT 152
Y + CGG C TC VE+I+G+D L E T+ EL L+ PE + RLACQ
Sbjct: 35 YPVLATCGGMALCATCHVEVIEGEDELGEATDPELDQLENLPEYFPTSRLACQV 88
>gi|186684189|ref|YP_001867385.1| ferredoxin [Nostoc punctiforme PCC 73102]
gi|186466641|gb|ACC82442.1| ferredoxin [Nostoc punctiforme PCC 73102]
Length = 126
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+ +SG L R I+L N I LY KV+NC G GSCGTC V++ N R
Sbjct: 26 QCVSGSNL-RTILLQNGIHLYNDGAKVINCRGIGSCGTCAVKVEGEVSAANWRDRARRSL 84
Query: 139 LKKKPES-WRLACQTIV 154
P++ RLACQT V
Sbjct: 85 PPHSPKTDLRLACQTQV 101
>gi|390945341|ref|YP_006409102.1| ferredoxin [Belliella baltica DSM 15883]
gi|390418769|gb|AFL86347.1| ferredoxin [Belliella baltica DSM 15883]
Length = 106
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQT 152
Y + CGG C TC VE+++G+D L E T+ EL L+ PE + RLACQ
Sbjct: 35 YPVLATCGGMALCATCHVEVMEGEDELGEATDVELDQLENLPEYFPTSRLACQV 88
>gi|170079270|ref|YP_001735908.1| ferredoxin [Synechococcus sp. PCC 7002]
gi|169886939|gb|ACB00653.1| probable ferredoxin [Synechococcus sp. PCC 7002]
Length = 169
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 15/96 (15%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE--- 135
+ + E LL+ +L K+ L A CGG G CGTC+V ++ G L+ T E
Sbjct: 37 QTLETETLLKA-LLRAKVHLDAI------CGGKGYCGTCVVHVVSGATQLSPVTAQEQTI 89
Query: 136 LRYLKKKPESWRLACQTIVGNKENSGKVC---SRTM 168
L LKK +++RL+CQ V + E VC SRT+
Sbjct: 90 LNNLKKSSDTYRLSCQAYVRDGETV--VCDLPSRTL 123
>gi|298707649|emb|CBJ25966.1| possible ferredoxin (2Fe-2S) [Ectocarpus siliculosus]
Length = 333
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR+ + +N I +Y + + NC G CGTCIV I +G + R+ E L+ P ++
Sbjct: 247 LRDFLTENGINVYQSVTRWTNCKGKQLCGTCIVAIDEGLESTTIRSVDESSTLRDNPPNY 306
Query: 147 RLACQT 152
RL+C T
Sbjct: 307 RLSCVT 312
>gi|428166951|gb|EKX35918.1| hypothetical protein GUITHDRAFT_160176 [Guillardia theta CCMP2712]
Length = 158
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 84 EKLLRNIMLDNKIELYATY-GKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK 142
E +LR+ ML K++LY T GK+ NCGGGG+CGTC V+++ G L+ RT E + LK
Sbjct: 77 ETILRDAMLAGKVDLYYTMKGKLFNCGGGGNCGTCKVDLVSGN--LSPRTAAEEKLLKGC 134
Query: 143 PESWRLACQTIV 154
P S+RLACQ+ V
Sbjct: 135 PPSFRLACQSCV 146
>gi|88770646|gb|ABD51926.1| chloroplast ferredoxin-like [Guillardia theta]
Length = 165
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
Query: 84 EKLLRNIMLDNKIELYATY-GKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK 142
E +LR+ ML K++LY T GK+ NCGGGG+CGTC V+++ G L+ RT E + LK
Sbjct: 84 ETILRDAMLAGKVDLYYTMKGKLFNCGGGGNCGTCKVDLVSGN--LSPRTAAEEKLLKGC 141
Query: 143 PESWRLACQTIV 154
P S+RLACQ+ V
Sbjct: 142 PPSFRLACQSCV 153
>gi|158336247|ref|YP_001517421.1| 2Fe-2S type ferredoxin [Acaryochloris marina MBIC11017]
gi|158306488|gb|ABW28105.1| ferredoxin, 2Fe-2S type, putative [Acaryochloris marina MBIC11017]
Length = 110
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPE 144
LR ++L+N+++LY +++NC G G+CGTC V I+ +N R R L
Sbjct: 19 LRQVLLENQVDLYNGQARLINCHGIGTCGTCAVAIMGDVSEVNRRDRMR-RSLPPHDSQR 77
Query: 145 SWRLACQTIV 154
RLACQT V
Sbjct: 78 DLRLACQTKV 87
>gi|17231013|ref|NP_487561.1| hypothetical protein all3521 [Nostoc sp. PCC 7120]
gi|17132654|dbj|BAB75220.1| all3521 [Nostoc sp. PCC 7120]
Length = 112
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L + I+LY + KV+NC G GSCGTC V++ + N R P +
Sbjct: 19 LRKVLLKSGIDLYNSGAKVINCRGIGSCGTCAVQVEGEVSVANWRDQARRSLPPHSPTKD 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|428775199|ref|YP_007166986.1| ferredoxin [Halothece sp. PCC 7418]
gi|428689478|gb|AFZ42772.1| ferredoxin [Halothece sp. PCC 7418]
Length = 120
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++L+N IE+Y +V+NC G G+CGTC VE+ +R L K E+
Sbjct: 19 LRKVLLENNIEVYNGNARVINCHGLGTCGTCTVEVEGEVSPRGQREKLRLSLPPHKEETT 78
Query: 147 -RLACQTIV 154
RL+CQ V
Sbjct: 79 RRLSCQVQV 87
>gi|75909424|ref|YP_323720.1| ferredoxin [Anabaena variabilis ATCC 29413]
gi|75703149|gb|ABA22825.1| Ferredoxin [Anabaena variabilis ATCC 29413]
Length = 112
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L + I+LY + KV+NC G GSCGTC V++ + N R P +
Sbjct: 19 LRKVLLKSGIDLYNSGAKVINCRGIGSCGTCAVQVEGEVSVANWRDQARRSLPPHSPTKD 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|170076880|ref|YP_001733518.1| ferredoxin-like protein [Synechococcus sp. PCC 7002]
gi|169884549|gb|ACA98262.1| ferredoxin-like protein [Synechococcus sp. PCC 7002]
Length = 109
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR ++L NKI LY K +NC G G+CGTC VEI + + T L P+
Sbjct: 19 LRKVLLANKISLYNGNAKTINCHGLGTCGTCAVEITGPVSAQSWKEKTRLSLPPHNPDKE 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVSV 87
>gi|193214969|ref|YP_001996168.1| ferredoxin [Chloroherpeton thalassium ATCC 35110]
gi|193088446|gb|ACF13721.1| ferredoxin [Chloroherpeton thalassium ATCC 35110]
Length = 263
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGNKENSGKVC 164
+CGG G+C TC V + +G + L+E TE+ +L +K+ E RLACQ + +V
Sbjct: 33 SCGGNGACQTCEVVVHEGMEALSEINPTEMAWLTPQKREEGHRLACQAKIVQDGIPIRVT 92
Query: 165 SRTMFLLNLL 174
+R L+ +
Sbjct: 93 TRVQMLMEIF 102
>gi|428201511|ref|YP_007080100.1| ferredoxin [Pleurocapsa sp. PCC 7327]
gi|427978943|gb|AFY76543.1| ferredoxin [Pleurocapsa sp. PCC 7327]
Length = 116
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++++N I+LY K++NC G GSCGTC VEI N + T P ++
Sbjct: 19 LRRVLIENGIDLYNGNAKIINCMGIGSCGTCAVEIEGEVSEPNWKDKTRRSLPPHSPTKN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 RRLACQTKV 87
>gi|194333970|ref|YP_002015830.1| ferredoxin [Prosthecochloris aestuarii DSM 271]
gi|194311788|gb|ACF46183.1| ferredoxin [Prosthecochloris aestuarii DSM 271]
Length = 356
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C TC V +++G+D L++ ++ E +L +K RLACQT + KE + +V S
Sbjct: 33 CGGHGVCQTCYVTVLEGEDCLSDLSDIERAFLSEKQIAGGGRLACQTTI-EKEGTIRVLS 91
Query: 166 R 166
R
Sbjct: 92 R 92
>gi|254425323|ref|ZP_05039041.1| hypothetical protein S7335_5486 [Synechococcus sp. PCC 7335]
gi|196192812|gb|EDX87776.1| hypothetical protein S7335_5486 [Synechococcus sp. PCC 7335]
Length = 114
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPE 144
LR ++LDN I+LY+ +NC G G+CGTC V I N R + R L +
Sbjct: 19 LRQVLLDNGIDLYSPRANYINCMGIGTCGTCAVAIEGDVSKANWR-DIARRSLPPHDAQK 77
Query: 145 SWRLACQTIV 154
S RLACQT V
Sbjct: 78 SLRLACQTQV 87
>gi|359458745|ref|ZP_09247308.1| 2Fe-2S type ferredoxin [Acaryochloris sp. CCMEE 5410]
Length = 110
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPE 144
LR ++L+N++E+Y +++NC G G+CGTC V I +N R R L
Sbjct: 19 LRQVLLENQVEIYNGQARLINCHGIGTCGTCAVAITGEVSEVNRRDRIR-RSLPPHDSQR 77
Query: 145 SWRLACQTIV 154
RLACQT V
Sbjct: 78 DLRLACQTKV 87
>gi|449015896|dbj|BAM79298.1| unknown [2Fe-2S] ferredoxin [Cyanidioschyzon merolae strain 10D]
Length = 191
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPE 144
LR ++L+NKI++Y GK+ NCGGGG CGTCIV+I +G+ N R E R K+ P+
Sbjct: 111 LRKVLLENKIDVYTLRGKLTNCGGGGQCGTCIVDITEGQYNTNPRGWREARIFENKQAPD 170
Query: 145 SWRLACQTIV 154
SWRL+C T +
Sbjct: 171 SWRLSCCTKI 180
>gi|290975964|ref|XP_002670711.1| predicted protein [Naegleria gruberi]
gi|284084273|gb|EFC37967.1| predicted protein [Naegleria gruberi]
Length = 122
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID------GKDLLNERTNTELRYLK 140
LR +++N I LY + NCGG G+CGTC V+++D KD + + E+R LK
Sbjct: 23 LRAALVENGIPLYNGKTETFNCGGNGTCGTCAVQVLDIDEKTSVKDSMKRTSGEEMR-LK 81
Query: 141 -----KKPESWRLACQTIV 154
K + RLACQ V
Sbjct: 82 LPPHFNKNQDIRLACQCQV 100
>gi|166362744|ref|YP_001655017.1| ferredoxin [Microcystis aeruginosa NIES-843]
gi|166085117|dbj|BAF99824.1| ferredoxin [Microcystis aeruginosa NIES-843]
Length = 111
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR I+L + I LY K++NC G GSCGTC V I+ +N + L P+ +
Sbjct: 19 LRRILLKHDISLYNGASKLINCRGIGSCGTCAVAIVGEVSAINWQEKARLSLPPHNPDNN 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|443324468|ref|ZP_21053219.1| ferredoxin [Xenococcus sp. PCC 7305]
gi|442795931|gb|ELS05267.1| ferredoxin [Xenococcus sp. PCC 7305]
Length = 109
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR ++L+NK+ LY K +NC G G+CGTC VEI+ N + P +
Sbjct: 19 LRRVLLENKLNLYNGNAKYINCMGIGTCGTCAVEIVGEVSAPNWKDKARRSLPPHNPNRN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 RRLACQTKV 87
>gi|427739914|ref|YP_007059458.1| ferredoxin [Rivularia sp. PCC 7116]
gi|427374955|gb|AFY58911.1| ferredoxin [Rivularia sp. PCC 7116]
Length = 108
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++LDN I+LY K +NC G G+CGTC V I + ++E + E L P S
Sbjct: 19 LRKVLLDNNIDLYNGNAKTINCRGLGTCGTCAVAI---QGEVSEPSWKEKTRLGLPPHSS 75
Query: 146 ---WRLACQTIV 154
RLACQT V
Sbjct: 76 ESDRRLACQTKV 87
>gi|427731506|ref|YP_007077743.1| ferredoxin [Nostoc sp. PCC 7524]
gi|427367425|gb|AFY50146.1| ferredoxin [Nostoc sp. PCC 7524]
Length = 112
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR I+L + I+LY KV+NC G GSCGTC V++ N R P +
Sbjct: 19 LRKILLKSSIDLYNDGAKVINCRGIGSCGTCAVKVEGEVSAANWRDQARRSLPPHSPTKD 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|397647627|gb|EJK77785.1| hypothetical protein THAOC_00360, partial [Thalassiosira oceanica]
Length = 183
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTEL-------R 137
LR ML N + + +++NC G G+CGTC VEI +G L ERT E
Sbjct: 88 LRTSMLKNGMSPHNGRSRLINCRGLGTCGTCAVEIYGKEGSILPKERTAQERIRLNFPPH 147
Query: 138 YLKKKPESWRLACQTIV 154
L K+ ++ RLACQ V
Sbjct: 148 NLAKQSDNLRLACQVQV 164
>gi|406661026|ref|ZP_11069151.1| Putidaredoxin [Cecembia lonarensis LW9]
gi|405555109|gb|EKB50156.1| Putidaredoxin [Cecembia lonarensis LW9]
Length = 106
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQ 151
Y + CGG C TC VEI++G++ L E T+ EL L+ PE + RLACQ
Sbjct: 35 YPILATCGGMALCATCHVEILEGENELGEATDAELDQLENLPEYFPTSRLACQ 87
>gi|409097128|ref|ZP_11217152.1| ferredoxin [Pedobacter agri PB92]
Length = 100
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE---SWRLACQTIVGNKE 158
Y + CGG C TC V++++G++ LNE T+ E L P+ + RLACQ + N
Sbjct: 30 YDILATCGGMALCATCCVDVLEGEEKLNEMTDDEYAMLDTLPDLLPNSRLACQLQLNNNM 89
Query: 159 NSGKV 163
+ KV
Sbjct: 90 DGLKV 94
>gi|428224955|ref|YP_007109052.1| ferredoxin [Geitlerinema sp. PCC 7407]
gi|427984856|gb|AFY66000.1| ferredoxin [Geitlerinema sp. PCC 7407]
Length = 112
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L N + LY KV+NC G G+CGTC V I N R P ++
Sbjct: 19 LRQVLLQNGVALYNGQAKVINCHGIGTCGTCAVAIEGEVSEANWRDQARRSLPPHSPAQN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 RRLACQTQV 87
>gi|424865875|ref|ZP_18289731.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86B]
gi|400758448|gb|EJP72655.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86B]
Length = 408
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
K SG KLL+ + DNKI L + CGGGG+C C +I++G + +
Sbjct: 49 KVQSGSKLLQT-LADNKIFLSSA------CGGGGTCSQCKCQILEGGGSILPTEESHFNS 101
Query: 139 LKKKPESWRLACQTIVGN 156
+KK E WRL+CQ V N
Sbjct: 102 REKK-EGWRLSCQVAVKN 118
>gi|448602800|ref|ZP_21656735.1| ferredoxin-like protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445747152|gb|ELZ98609.1| ferredoxin-like protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 128
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++ + + NC GGGSCGTC VE+ ++ LR+ P+S
Sbjct: 18 VLRDVLRAAGESPHNGHSSWFNCRGGGSCGTCAVEVRGPVTYRTKKERRRLRFPPHDPDS 77
Query: 146 W-RLACQTIV 154
RLACQT+V
Sbjct: 78 GLRLACQTVV 87
>gi|448621248|ref|ZP_21668223.1| ferredoxin-like protein [Haloferax denitrificans ATCC 35960]
gi|445755741|gb|EMA07123.1| ferredoxin-like protein [Haloferax denitrificans ATCC 35960]
Length = 128
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++ + + NC GGGSCGTC VE+ ++ LR+ P+S
Sbjct: 18 VLRDVLRAAGESPHNGHSSWFNCRGGGSCGTCAVEVRGPVTYRTKKERRRLRFPPHDPDS 77
Query: 146 W-RLACQTIV 154
RLACQT+V
Sbjct: 78 GLRLACQTVV 87
>gi|425470246|ref|ZP_18849116.1| Ferredoxin [Microcystis aeruginosa PCC 9701]
gi|389884166|emb|CCI35497.1| Ferredoxin [Microcystis aeruginosa PCC 9701]
Length = 112
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR I+L + I LY K++NC G GSCGTC V I+ +N + L P+ +
Sbjct: 19 LRRILLKHDISLYNGGSKLINCRGIGSCGTCAVAIVGEVSAINWQEKARLSLPPHNPDNN 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|395211671|ref|ZP_10399445.1| ferredoxin [Pontibacter sp. BAB1700]
gi|394457616|gb|EJF11742.1| ferredoxin [Pontibacter sp. BAB1700]
Length = 109
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 70 DGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLN 129
DGS P + A+ GE +L ++ L+N I+L NCGG C TC V I G D L
Sbjct: 12 DGS-PDQVHPAVEGESVL-DVALNNDIKLQH------NCGGVCGCSTCHVYIESGMDDLP 63
Query: 130 ERTNTELRYLKKKPE---SWRLACQTIVGNKEN 159
E T+ E Y+ + + + RL CQ +V E+
Sbjct: 64 EITDKEEDYIDRAVDPRINSRLGCQCVVQGNED 96
>gi|427419738|ref|ZP_18909921.1| ferredoxin [Leptolyngbya sp. PCC 7375]
gi|425762451|gb|EKV03304.1| ferredoxin [Leptolyngbya sp. PCC 7375]
Length = 111
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++LDN I LY ++NC G GSCGTC V I N + PE
Sbjct: 22 LRRVLLDNDIALYNGNANLINCRGIGSCGTCAVMIEGEVSAANWKDRGRRSLPPHTPERP 81
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 82 LRLACQTTV 90
>gi|224009734|ref|XP_002293825.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970497|gb|EED88834.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 289
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 54/112 (48%), Gaps = 28/112 (25%)
Query: 52 EPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNK-IELY-ATYGKVMNCG 109
+P+K +I LE + GD+ LR +L NK IELY K+ NCG
Sbjct: 191 QPDKADIVLE---AKVGDN----------------LRKTLLANKDIELYRGLKKKLGNCG 231
Query: 110 GGGSCGTCIVEIID---GKDLLNERTNTELRYLKKKPE--SWRLAC-QTIVG 155
G G CG C VE++D GK + ER+ E +K E RLAC IVG
Sbjct: 232 GSGQCGFCAVELVDETEGK-VWGERSEYEDNKIKGGEERKGQRLACLNNIVG 282
>gi|218440346|ref|YP_002378675.1| hydrogenase subunit [Cyanothece sp. PCC 7424]
gi|218173074|gb|ACK71807.1| putative hydrogenase component [Cyanothece sp. PCC 7424]
Length = 112
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L + IELY K++NC G GSCGTC VEI L + L + P +
Sbjct: 19 LRQVLLKHGIELYNGNAKLINCLGLGSCGTCAVEIEGEVTDLTWKEKARLSFPPHSPTKK 78
Query: 146 WRLACQT-IVGN 156
RLACQ ++G+
Sbjct: 79 RRLACQIGVIGD 90
>gi|76803089|ref|YP_331184.1| ferredoxin I 4 [Natronomonas pharaonis DSM 2160]
gi|76558954|emb|CAI50550.1| ferredoxin (2Fe-2S) [Natronomonas pharaonis DSM 2160]
Length = 109
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+I+L+ + + ++NC G G+CGTC VEI + R + L PES
Sbjct: 18 ILRDILLNAGLSPHNGRSDLLNCRGLGTCGTCAVEIDGAVSNIGRRERSRLAVPPHDPES 77
Query: 146 -WRLACQTIV 154
RLACQT V
Sbjct: 78 GLRLACQTRV 87
>gi|223993101|ref|XP_002286234.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977549|gb|EED95875.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 275
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKV 163
NCG GG C TC V + G +LL+ E + L++ P WRLAC++ VG G V
Sbjct: 211 NCGSGGLCRTCAVSVTRGGELLSPPKANEKKMLEETPR-WRLACKSWVGYGMKEGDV 266
>gi|292655400|ref|YP_003535297.1| ferredoxin-like protein [Haloferax volcanii DS2]
gi|448292028|ref|ZP_21482702.1| ferredoxin-like protein [Haloferax volcanii DS2]
gi|291372964|gb|ADE05191.1| ferredoxin like protein [Haloferax volcanii DS2]
gi|445573547|gb|ELY28068.1| ferredoxin-like protein [Haloferax volcanii DS2]
Length = 125
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++ + + NC GGGSCGTC V + ++ LR+ P+S
Sbjct: 18 VLRDVLRAAGESPHNGHSSWFNCRGGGSCGTCAVRVRGPATYRTKKERRRLRFPPHDPDS 77
Query: 146 W-RLACQTIV 154
RLACQT+V
Sbjct: 78 GLRLACQTVV 87
>gi|425466004|ref|ZP_18845307.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389831623|emb|CCI25429.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 110
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR ++L + I LY K++NC G GSCGTC V I+ +N + L P+ +
Sbjct: 19 LRRVLLKHDISLYNGGSKLINCRGIGSCGTCAVAIVGEVSAINWQEKARLSLPPHNPDNN 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|383620008|ref|ZP_09946414.1| ferredoxin [Halobiforma lacisalsi AJ5]
gi|448696382|ref|ZP_21697856.1| ferredoxin [Halobiforma lacisalsi AJ5]
gi|445783588|gb|EMA34416.1| ferredoxin [Halobiforma lacisalsi AJ5]
Length = 124
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 73 YPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERT 132
Y ER + G +LR+++L+ + + +NCGG +CGTC V + + ++E T
Sbjct: 6 YRGERIECERG-AILRDVLLEAGLSPHNGMADTLNCGGHATCGTCAVRV---EGDVSEPT 61
Query: 133 NTELRYLKKKP----ESWRLACQTIV 154
E R L P E RLACQT V
Sbjct: 62 AAERRRLSVPPLRGREGLRLACQTEV 87
>gi|300772651|ref|ZP_07082521.1| ferredoxin [Sphingobacterium spiritivorum ATCC 33861]
gi|300760954|gb|EFK57780.1| ferredoxin [Sphingobacterium spiritivorum ATCC 33861]
Length = 109
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP---ESWRLACQTIVGNKE 158
Y + CGG C TC V+I++G + L+E + EL L P E RLACQ +GN E
Sbjct: 38 YEILATCGGMALCATCHVQILEGAENLSEPQDQELDMLDTLPDADEESRLACQIRLGN-E 96
Query: 159 NSG 161
N G
Sbjct: 97 NDG 99
>gi|67923529|ref|ZP_00517003.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|416397961|ref|ZP_11686751.1| Ferredoxin [Crocosphaera watsonii WH 0003]
gi|67854615|gb|EAM49900.1| Ferredoxin [Crocosphaera watsonii WH 8501]
gi|357262622|gb|EHJ11735.1| Ferredoxin [Crocosphaera watsonii WH 0003]
Length = 119
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR +++++KI+L+ K++NC G GSCGTC +EI N + + PE +
Sbjct: 19 LRRVLINHKIDLHNGNSKIINCRGIGSCGTCSLEIEGLVSEANWKDKARRSFPPHSPEKN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 RRLACQTKV 87
>gi|422304726|ref|ZP_16392066.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389790035|emb|CCI13998.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 110
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR I+L + I LY K++NC G GSCGTC V I+ +N + L P +
Sbjct: 19 LRRILLKHDISLYNGGSKLINCRGIGSCGTCAVAIVGEVSAINWQEKARLSLPPHNPNNN 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|448386119|ref|ZP_21564327.1| ferredoxin I 5 [Haloterrigena thermotolerans DSM 11522]
gi|445656017|gb|ELZ08859.1| ferredoxin I 5 [Haloterrigena thermotolerans DSM 11522]
Length = 114
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135
ER ++ +LR+ +L++ +Y T +V NCGG G C TC VE+ + +
Sbjct: 15 ERVIEVASGTILRDALLEHGFPVYGTVSRVANCGGRGLCSTCTVEVDPAPEPTHWHDAAA 74
Query: 136 LRY 138
+R+
Sbjct: 75 VRF 77
>gi|433590222|ref|YP_007279718.1| ferredoxin [Natrinema pellirubrum DSM 15624]
gi|448332372|ref|ZP_21521616.1| ferredoxin I 5 [Natrinema pellirubrum DSM 15624]
gi|433305002|gb|AGB30814.1| ferredoxin [Natrinema pellirubrum DSM 15624]
gi|445627476|gb|ELY80800.1| ferredoxin I 5 [Natrinema pellirubrum DSM 15624]
Length = 114
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135
ER ++ +LR+ +L++ +Y T +V NCGG G C TC VE+ + +
Sbjct: 15 ERVIEVASGTILRDALLEHGFPVYGTVSRVANCGGRGLCSTCTVEVDPAPEPTHWHDAAA 74
Query: 136 LRY 138
+R+
Sbjct: 75 VRF 77
>gi|434389560|ref|YP_007100171.1| ferredoxin [Chamaesiphon minutus PCC 6605]
gi|428020550|gb|AFY96644.1| ferredoxin [Chamaesiphon minutus PCC 6605]
Length = 108
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR ++L N ++LY K++NC G G+CGTC V + N + + P +
Sbjct: 19 LRQVLLANGVDLYNGNAKIINCMGIGTCGTCAVALEGDVSAPNWKDTARRSFPPHTPSRN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|255534001|ref|YP_003094373.1| ferredoxin [Pedobacter heparinus DSM 2366]
gi|255346985|gb|ACU06311.1| ferredoxin [Pedobacter heparinus DSM 2366]
Length = 109
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQ 151
Y + CGG C TC V++++G+D LNE ++ E L P+ RLACQ
Sbjct: 39 YDILATCGGMALCATCCVDVLEGEDKLNEMSDDEYAMLDTLPDVLPNSRLACQ 91
>gi|448318738|ref|ZP_21508251.1| ferredoxin [Natronococcus jeotgali DSM 18795]
gi|445598059|gb|ELY52126.1| ferredoxin [Natronococcus jeotgali DSM 18795]
Length = 110
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE- 144
+LR+++L+ + + ++NC G G+CGTC VE IDG +E T+ E R L P
Sbjct: 18 ILRDVLLEAGLSPHNGRAALLNCRGHGTCGTCAVE-IDGP--ASEPTSRERRRLSAPPHD 74
Query: 145 ---SWRLACQTIV 154
RL+CQT V
Sbjct: 75 PDAGLRLSCQTEV 87
>gi|390441740|ref|ZP_10229776.1| Ferredoxin [Microcystis sp. T1-4]
gi|389834947|emb|CCI33902.1| Ferredoxin [Microcystis sp. T1-4]
Length = 110
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++L + I LY +++NC G GSCGTC V I+ +N + L P++
Sbjct: 19 LRRVLLKHDISLYNGGSQLINCRGIGSCGTCAVAIVGEVSAINWQEKARLSLPPHNPDNH 78
Query: 147 -RLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVRV 87
>gi|397605147|gb|EJK58903.1| hypothetical protein THAOC_20937 [Thalassiosira oceanica]
Length = 248
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII--DGKDLLNERTNTEL-------R 137
LR ML N + + +++NC G G+CGTC VEI +G L ERT E
Sbjct: 124 LRTSMLKNGMSPHNGRSRLINCRGLGTCGTCAVEIYGREGSILPMERTAQERIRLNFPPH 183
Query: 138 YLKKKPESWRLACQTIVGN 156
L K+ ++ RLACQ V +
Sbjct: 184 NLAKQSDNLRLACQVQVHD 202
>gi|227538019|ref|ZP_03968068.1| ferredoxin, 2Fe-2S (andrenodoxin family) [Sphingobacterium
spiritivorum ATCC 33300]
gi|227242095|gb|EEI92110.1| ferredoxin, 2Fe-2S (andrenodoxin family) [Sphingobacterium
spiritivorum ATCC 33300]
Length = 109
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES---WRLACQTIVGNKE 158
Y + CGG C TC V+I++G + L+E + EL L P++ RLACQ +GN E
Sbjct: 38 YEILATCGGMALCATCHVQILEGAENLSEPQDQELDMLDTLPDADDESRLACQIRLGN-E 96
Query: 159 NSG 161
N G
Sbjct: 97 NDG 99
>gi|354554927|ref|ZP_08974230.1| ferredoxin [Cyanothece sp. ATCC 51472]
gi|353553081|gb|EHC22474.1| ferredoxin [Cyanothece sp. ATCC 51472]
Length = 111
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++L N I+LY K++NC G G+CGTC +EI + L++E + P S
Sbjct: 19 LRRVLLRNNIDLYNGQAKIINCRGIGTCGTCALEI---EGLVSEANWKDQARRSLPPHSL 75
Query: 147 ----RLACQTIV 154
RLACQT V
Sbjct: 76 DKNRRLACQTKV 87
>gi|218245331|ref|YP_002370702.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|257058367|ref|YP_003136255.1| ferredoxin [Cyanothece sp. PCC 8802]
gi|218165809|gb|ACK64546.1| ferredoxin [Cyanothece sp. PCC 8801]
gi|256588533|gb|ACU99419.1| ferredoxin [Cyanothece sp. PCC 8802]
Length = 108
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L + I LY K +NC G GSCGTC VEI+ N + P ++
Sbjct: 19 LRRVLLQHGIPLYNHKAKFINCRGIGSCGTCAVEIVGEVSDPNWKDTARRSLPPHSPLKN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 RRLACQTQV 87
>gi|428309797|ref|YP_007120774.1| ferredoxin [Microcoleus sp. PCC 7113]
gi|428251409|gb|AFZ17368.1| ferredoxin [Microcoleus sp. PCC 7113]
Length = 112
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++L++ +ELY K++NC G GSCGTC V + N + P +
Sbjct: 19 LRQVLLEHGVELYNGKAKIINCMGFGSCGTCAVTVEGDVSEPNWKDKARRSLPPHSPTAN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 RRLACQTKV 87
>gi|126659889|ref|ZP_01731014.1| Ferredoxin [Cyanothece sp. CCY0110]
gi|126618852|gb|EAZ89596.1| Ferredoxin [Cyanothece sp. CCY0110]
Length = 111
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++L N I+LY K++NC G G+CGTC +EI + L++E + P S
Sbjct: 19 LRRVLLKNNIDLYNGQAKIINCRGIGTCGTCALEI---EGLVSEANWKDKARRSLPPHSL 75
Query: 147 ----RLACQTIV 154
RLACQT V
Sbjct: 76 EKNRRLACQTKV 87
>gi|428318398|ref|YP_007116280.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
gi|428242078|gb|AFZ07864.1| ferredoxin [Oscillatoria nigro-viridis PCC 7112]
Length = 112
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++L N I+LY KV+NC G G+CGTC V + R L P S
Sbjct: 19 LREVLLKNGIDLYNGNAKVINCHGLGTCGTCAVTVEGEVSEPQWREKARLSVPPHSPASN 78
Query: 146 WRLACQTIV 154
RL+CQT V
Sbjct: 79 RRLSCQTKV 87
>gi|172035687|ref|YP_001802188.1| hypothetical protein cce_0771 [Cyanothece sp. ATCC 51142]
gi|171697141|gb|ACB50122.1| hypothetical protein cce_0771 [Cyanothece sp. ATCC 51142]
Length = 123
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++L N I+LY K++NC G G+CGTC +EI + L++E + P S
Sbjct: 31 LRRVLLRNNIDLYNGQAKIINCRGIGTCGTCALEI---EGLVSEANWKDQARRSLPPHSL 87
Query: 147 ----RLACQTIV 154
RLACQT V
Sbjct: 88 DKNRRLACQTKV 99
>gi|428779764|ref|YP_007171550.1| ferredoxin [Dactylococcopsis salina PCC 8305]
gi|428694043|gb|AFZ50193.1| ferredoxin [Dactylococcopsis salina PCC 8305]
Length = 109
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
LR+++L NK++LY +NC G G+CGTC VEI
Sbjct: 19 LRDVLLKNKVDLYNEAASFINCYGLGTCGTCTVEI 53
>gi|435846323|ref|YP_007308573.1| ferredoxin [Natronococcus occultus SP4]
gi|433672591|gb|AGB36783.1| ferredoxin [Natronococcus occultus SP4]
Length = 110
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 72 SYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
+Y E G +LR+++L+ + + ++NC G G+CGTC VE IDG ++E
Sbjct: 5 TYEAEEIDCEDG-AILRDVLLEAGLSPHNGRAALLNCRGHGTCGTCAVE-IDGP--VSEP 60
Query: 132 TNTELRYLKKKPE----SWRLACQTIV 154
T E R L P RL+CQT V
Sbjct: 61 TTREKRRLSVPPHDPDGGLRLSCQTEV 87
>gi|76802531|ref|YP_327539.1| ferredoxin I 5 [Natronomonas pharaonis DSM 2160]
gi|76558396|emb|CAI49987.2| ferredoxin (2Fe-2S) [Natronomonas pharaonis DSM 2160]
Length = 113
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT 116
+IEL I A D+ + VER +LR+++L+ +Y T +NCGG G C T
Sbjct: 4 DIELTVIT--AADESTITVERGS------VLRDVLLERGFSVYGTVSSRVNCGGRGLCAT 55
Query: 117 CIVEI 121
C VE+
Sbjct: 56 CTVEV 60
>gi|427724141|ref|YP_007071418.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427355861|gb|AFY38584.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 108
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR ++L + LY ++NC G GSCGTC VEI N + L + PE
Sbjct: 19 LRKVLLKHNAALYNGKANIINCMGIGSCGTCAVEIEGELPERNWKEKARLSFPPHNPEKQ 78
Query: 147 -RLACQTIVGN 156
RLACQ V N
Sbjct: 79 RRLACQITVEN 89
>gi|448319823|ref|ZP_21509311.1| ferredoxin I 4 [Natronococcus amylolyticus DSM 10524]
gi|445606229|gb|ELY60133.1| ferredoxin I 4 [Natronococcus amylolyticus DSM 10524]
Length = 110
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++++ + + ++NC G G+CGTC VE IDG +E TN E R L P
Sbjct: 18 ILRDVLVEAGLSPHNGRSALLNCRGHGTCGTCAVE-IDGS--TSEPTNREKRRLSVPPHD 74
Query: 146 ----WRLACQTIV 154
RL+CQT V
Sbjct: 75 SDSGLRLSCQTEV 87
>gi|448571518|ref|ZP_21639777.1| ferredoxin-like protein [Haloferax lucentense DSM 14919]
gi|448596272|ref|ZP_21653612.1| ferredoxin-like protein [Haloferax alexandrinus JCM 10717]
gi|445721863|gb|ELZ73527.1| ferredoxin-like protein [Haloferax lucentense DSM 14919]
gi|445741960|gb|ELZ93458.1| ferredoxin-like protein [Haloferax alexandrinus JCM 10717]
Length = 140
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++ + + NC GGGSCGTC V + + + RT E R L+ P
Sbjct: 18 VLRDVLRAAGESPHNGHSSWFNCRGGGSCGTCAVRV---RGPVTYRTKKERRRLRFPPHD 74
Query: 146 ----WRLACQTIV 154
RLACQT+V
Sbjct: 75 SESGLRLACQTVV 87
>gi|427724303|ref|YP_007071580.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427356023|gb|AFY38746.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 178
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTE---LRYLKKKPESWRLACQTIVGNKE 158
CGG G CGTC V I G L+ T E L L + PE +RL+CQ V + E
Sbjct: 68 CGGKGYCGTCSVRINSGSQQLSPVTTQEISTLNNLNQSPEDYRLSCQVKVDDGE 121
>gi|425460122|ref|ZP_18839604.1| Ferredoxin [Microcystis aeruginosa PCC 9808]
gi|389827233|emb|CCI21661.1| Ferredoxin [Microcystis aeruginosa PCC 9808]
Length = 110
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-S 145
LR I+L + I Y K++NC G GSCGTC V I+ +N + L P+ +
Sbjct: 19 LRRILLKHDISSYNGASKLINCRGIGSCGTCAVAIVGEVSAINWQEKARLSLPPHNPDNN 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|448561908|ref|ZP_21635041.1| ferredoxin-like protein [Haloferax prahovense DSM 18310]
gi|445720004|gb|ELZ71681.1| ferredoxin-like protein [Haloferax prahovense DSM 18310]
Length = 125
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 77 RAKAISGEK--LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134
R + I+ ++ +LR+++ + + NC GGGSCGTC V + + + RT
Sbjct: 7 RGREIACDRGDVLRDVLRAAGEPPHNGHSSWFNCRGGGSCGTCAVRV---RGPVTYRTKK 63
Query: 135 ELRYLKKKPE----SWRLACQTIV 154
E R L+ P RLACQT+V
Sbjct: 64 ERRRLRFPPHDSDSGLRLACQTVV 87
>gi|428209100|ref|YP_007093453.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
gi|428011021|gb|AFY89584.1| ferredoxin [Chroococcidiopsis thermalis PCC 7203]
Length = 121
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L + IELY KV+NC G GSCGTC V + N + T P +
Sbjct: 28 LRQVLLKHDIELYNGGAKVINCHGIGSCGTCAVLVEGEVSEPNWQDKTRRSLPPHSPTRN 87
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 88 LRLACQTKV 96
>gi|326800365|ref|YP_004318184.1| ferredoxin [Sphingobacterium sp. 21]
gi|326551129|gb|ADZ79514.1| ferredoxin [Sphingobacterium sp. 21]
Length = 106
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP---ESWRLACQ 151
Y + CGG C TC VE++ G + L+E ++ EL L P E+ RLACQ
Sbjct: 35 YNILATCGGMALCATCHVEVLSGMERLHEASDDELNMLDTLPDADENSRLACQ 87
>gi|390444188|ref|ZP_10231970.1| ferredoxin [Nitritalea halalkaliphila LW7]
gi|389665197|gb|EIM76672.1| ferredoxin [Nitritalea halalkaliphila LW7]
Length = 107
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 102 YGKVMNCGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESW---RLACQT 152
Y + CGG C TC VEI++ G D L E T+ EL L+ PE + RLACQ
Sbjct: 35 YPVLATCGGMALCATCHVEILEGGADDLGEATDVELDQLENLPEYFPTSRLACQV 89
>gi|332709534|ref|ZP_08429495.1| ferredoxin [Moorea producens 3L]
gi|332351793|gb|EGJ31372.1| ferredoxin [Moorea producens 3L]
Length = 110
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPE 144
LR ++L++ + LY KV+NC G GSCGTC VE +DG+ + R L
Sbjct: 19 LRKVLLEHGVALYNGNAKVINCRGLGSCGTCAVE-LDGEVSEPNWKDKARRSLPPHSPTA 77
Query: 145 SWRLACQTIV 154
+ RLACQT V
Sbjct: 78 NRRLACQTKV 87
>gi|448586014|ref|ZP_21648186.1| ferredoxin-like protein [Haloferax gibbonsii ATCC 33959]
gi|445725632|gb|ELZ77255.1| ferredoxin-like protein [Haloferax gibbonsii ATCC 33959]
Length = 125
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE- 144
+LR+++ + + NC GGGSCGTC V + + + RT E R L+ P
Sbjct: 18 VLRDVLRAAGEPPHNGHSSWFNCRGGGSCGTCAVRV---RGPVTYRTKKERRRLRFPPHD 74
Query: 145 ---SWRLACQTIV 154
RLACQT+V
Sbjct: 75 SDSGLRLACQTVV 87
>gi|448541219|ref|ZP_21624050.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-646]
gi|448549604|ref|ZP_21628209.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-645]
gi|448555284|ref|ZP_21631324.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-644]
gi|445708381|gb|ELZ60221.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-646]
gi|445712652|gb|ELZ64433.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-645]
gi|445718029|gb|ELZ69732.1| ferredoxin-like protein [Haloferax sp. ATCC BAA-644]
Length = 137
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++ + + NC GGGSCGTC V + ++ R+ P+S
Sbjct: 18 VLRDVLRAAGESPHNGHSSWFNCRGGGSCGTCAVRVRGPVTYRTKKERRRFRFPPHDPDS 77
Query: 146 W-RLACQTIV 154
RLACQT+V
Sbjct: 78 GLRLACQTVV 87
>gi|440751776|ref|ZP_20930979.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
gi|440176269|gb|ELP55542.1| 2Fe-2S iron-sulfur cluster binding domain protein [Microcystis
aeruginosa TAIHU98]
Length = 110
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR I+L + I LY K +NC G GSCGTC V I+ +N + P +
Sbjct: 19 LRRILLKHDISLYNGGSKFINCRGIGSCGTCAVAIVGEVSAINWQEKARFSLPPHNPNNN 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQVKV 87
>gi|297621230|ref|YP_003709367.1| ferredoxin [2Fe-2S] 4 [Waddlia chondrophila WSU 86-1044]
gi|297376531|gb|ADI38361.1| putative ferredoxin [2Fe-2S] 4 [Waddlia chondrophila WSU 86-1044]
gi|337293458|emb|CCB91447.1| Ferredoxin-4 [Waddlia chondrophila 2032/99]
Length = 88
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQ 151
G CGTC++EI +G + L++ T E+ +L P+ RLACQ
Sbjct: 37 GVCGTCVIEIKEGGENLSDPTQEEIDFLGDDPQDERLACQ 76
>gi|99080454|ref|YP_612608.1| guanylate cyclase [Ruegeria sp. TM1040]
gi|99036734|gb|ABF63346.1| adenylate/guanylate cyclase [Ruegeria sp. TM1040]
Length = 586
Score = 43.9 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK--KKPESWRLACQ 151
CGG G C TC V I+ G D L T E R L+ PE+ RLACQ
Sbjct: 312 CGGKGRCTTCRVAILAGGDDLPPPTAAEARSLRAINAPENMRLACQ 357
>gi|428296951|ref|YP_007135257.1| ferredoxin [Calothrix sp. PCC 6303]
gi|428233495|gb|AFY99284.1| ferredoxin [Calothrix sp. PCC 6303]
Length = 112
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR+ +L N IELY KV+NC G G+CGTC V I + N + P
Sbjct: 19 LRSCLLRNGIELYNGGAKVINCRGIGTCGTCAVYIEGEVNQPNWKDKARRSLPPHSPTRE 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|307154164|ref|YP_003889548.1| ferredoxin [Cyanothece sp. PCC 7822]
gi|306984392|gb|ADN16273.1| ferredoxin [Cyanothece sp. PCC 7822]
Length = 112
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L + + LY KV+NC G GSCGTC VEI N + L P +
Sbjct: 19 LRQVLLKHGVALYNGKAKVINCLGLGSCGTCAVEIEGAVTDPNWKEKARLSLPPHSPTKK 78
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 79 RRLACQIRV 87
>gi|300869574|ref|ZP_07114155.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300332442|emb|CBN59355.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 112
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++L N I +Y ++NC G G+CGTC VE+ + R T L P S
Sbjct: 19 LRQVLLKNDIAVYNGKAAIVNCHGLGTCGTCAVEVEGEVSEPSWREKTRLSLPPHSPTSN 78
Query: 146 WRLACQTIV 154
RL+CQT V
Sbjct: 79 RRLSCQTQV 87
>gi|149275896|ref|ZP_01882041.1| ferredoxin, 2Fe-2S [Pedobacter sp. BAL39]
gi|149233324|gb|EDM38698.1| ferredoxin, 2Fe-2S [Pedobacter sp. BAL39]
Length = 110
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 71 GSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNE 130
G PVE A SGE +L + LDN IEL NCGG C TC V + G D L E
Sbjct: 14 GKSPVELPIA-SGESVLE-VCLDNGIELQH------NCGGVCGCSTCHVYVNKGMDDLQE 65
Query: 131 RTNTELRYLKK--KPE-SWRLACQTIV 154
++ E ++ + +P+ + RL CQ +V
Sbjct: 66 ISDKEEDFIDRAVRPKITSRLGCQCVV 92
>gi|359299810|ref|ZP_09185649.1| 2Fe-2S ferredoxin [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305615|ref|ZP_10824674.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sputorum HK 2154]
gi|400376728|gb|EJP29615.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sputorum HK 2154]
Length = 113
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 25 DNLLELAHNAGVEIHHACDGSCACTTCHVVIREGYDSLNETTDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG+++
Sbjct: 82 DSRLSCQCVVGDED 95
>gi|149922427|ref|ZP_01910860.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
gi|149816707|gb|EDM76198.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
Length = 798
Score = 43.5 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 74 PVER--AKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
P ER A A G+ LL + L A CGG C TC V ++ G+D L+ R
Sbjct: 375 PGERVVASAPEGDTLL-------DVSLNAGIPHFHACGGNARCSTCRVVVLQGRDNLSPR 427
Query: 132 TNTELRYLKKK--PESWRLACQTIV 154
E R +++ P S RLACQ V
Sbjct: 428 PPLEQRIAERRQWPASTRLACQARV 452
>gi|402847598|ref|ZP_10895878.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas sp. oral
taxon 279 str. F0450]
gi|402265990|gb|EJU15442.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas sp. oral
taxon 279 str. F0450]
Length = 404
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGNKENSGKVCS 165
CGG GSCG C +++G E TE + K++ E WRLACQT V KE+ +
Sbjct: 61 CGGSGSCGQCRCRVVEGG---GEILPTETGFFSRKEQKEHWRLACQTKV--KEDMQVIVP 115
Query: 166 RTMF 169
++F
Sbjct: 116 ESVF 119
>gi|451947019|ref|YP_007467614.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Desulfocapsa sulfexigens DSM 10523]
gi|451906367|gb|AGF77961.1| Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF
[Desulfocapsa sulfexigens DSM 10523]
Length = 145
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 83 GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK 142
G LL N +++N ++ T CGG +CG C + I++G+ L + E++ L K
Sbjct: 58 GYSLLNNFLINNA-PIHTT------CGGHANCGCCRIRILEGEKGLTQPNEREVKRLGKD 110
Query: 143 --PESWRLACQT 152
+ WRL+CQT
Sbjct: 111 LISQGWRLSCQT 122
>gi|193212320|ref|YP_001998273.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
gi|193085797|gb|ACF11073.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
Length = 222
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG C TC V+I++G +LL+ ++ E L E R+ACQ + E GK+
Sbjct: 33 CGGNAICQTCYVKILEGAELLSPMSDAEKAMLSDTLVKEGTRMACQATI---EKPGKI-- 87
Query: 166 RTMFLLNLLAFLQKEMRVTSLNHSKLPS 193
LL +++ R+T N ++LP+
Sbjct: 88 ------TLLTTVEEAKRMTLTNPTQLPA 109
>gi|375014013|ref|YP_004991001.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Owenweeksia hongkongensis DSM 17368]
gi|359349937|gb|AEV34356.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Owenweeksia hongkongensis DSM 17368]
Length = 437
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGN 156
CGGGG+C C +++DG E TE Y +K ++WRL CQ V N
Sbjct: 73 CGGGGTCAMCKCQVLDGG---GEILPTEAPYFTRKEIADNWRLGCQVKVKN 120
>gi|451980870|ref|ZP_21929255.1| Iron-sulfur cluster-binding protein [Nitrospina gracilis 3/211]
gi|451761992|emb|CCQ90498.1| Iron-sulfur cluster-binding protein [Nitrospina gracilis 3/211]
Length = 99
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KP 143
LR + NKI +Y K++NC G G C +C VEI G + R E LKK K
Sbjct: 21 LREAAIANKIGIYQHIFKILNCRGRGLCSSCRVEITSGN--VAPRNEVEENNLKKALTKN 78
Query: 144 ESWRLACQTIV 154
+ RLACQ V
Sbjct: 79 PNLRLACQIKV 89
>gi|428773166|ref|YP_007164954.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
gi|428687445|gb|AFZ47305.1| ferredoxin [Cyanobacterium stanieri PCC 7202]
Length = 111
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY-LKKKPES 145
LR I+L N + LY K +NC G GSCGTC V+I + N + + +
Sbjct: 19 LRKILLKNDLNLYNGKAKYINCMGIGSCGTCAVQIEGEVNAPNWKDKARRSFPPHSRDRD 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTEV 87
>gi|448466696|ref|ZP_21599201.1| ferredoxin [Halorubrum kocurii JCM 14978]
gi|445813556|gb|EMA63533.1| ferredoxin [Halorubrum kocurii JCM 14978]
Length = 104
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 72 SYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
SY E + G+ +LR+++ + + +Y K +NC G GSCG+C V++ ++
Sbjct: 5 SYQGEEIECEKGD-VLRDVLAEAGLSVYNGKMKQLNCRGAGSCGSCAVQVDGEVSEPGKK 63
Query: 132 TNTELRYLKKKP-ESWRLACQTIV 154
T L + P RLACQT V
Sbjct: 64 EKTRLWFPPHHPSHDVRLACQTKV 87
>gi|410446623|ref|ZP_11300726.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86E]
gi|409980295|gb|EKO37046.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86E]
Length = 410
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
SG KLL+ + +NKI L + CGGGG+C C +I +G + + K+
Sbjct: 52 SGNKLLQT-LAENKIFLSSA------CGGGGTCSQCKCQIAEGGGSILPTEESHFNS-KE 103
Query: 142 KPESWRLACQTIVGN 156
K + WRL+CQ V N
Sbjct: 104 KKDGWRLSCQVAVKN 118
>gi|448299546|ref|ZP_21489555.1| ferredoxin I 5 [Natronorubrum tibetense GA33]
gi|445587521|gb|ELY41779.1| ferredoxin I 5 [Natronorubrum tibetense GA33]
Length = 115
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT 116
EIEL I GD + VER LR+ + D +Y T +NCGG G C T
Sbjct: 6 EIELTVIDD--GDRSTITVERGTT------LRDALRDRGFSVYGTVSSQLNCGGRGLCAT 57
Query: 117 CIVEI 121
C VE+
Sbjct: 58 CTVEV 62
>gi|149280699|ref|ZP_01886810.1| ferrodoxin [Pedobacter sp. BAL39]
gi|149228564|gb|EDM33972.1| ferrodoxin [Pedobacter sp. BAL39]
Length = 109
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE---SWRLACQ 151
Y + CGG C TC V++++G++ LNE ++ E L P+ + RLACQ
Sbjct: 39 YDILATCGGMALCATCCVDVLEGEEKLNEMSDDEYAMLDTLPDLLPNSRLACQ 91
>gi|424811603|ref|ZP_18236854.1| ferredoxin [Candidatus Nanosalinarum sp. J07AB56]
gi|339757329|gb|EGQ40910.1| ferredoxin [Candidatus Nanosalinarum sp. J07AB56]
Length = 100
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 75 VERAKAIS---GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
V+R +A+ GE +L + +LDN I+ CGG +C TC VE+ DG D L++
Sbjct: 7 VDRERALEVDEGETVL-DALLDNGIDWMHA------CGGFCNCTTCAVEVEDGWDNLSDM 59
Query: 132 TNTELRYLKK------KPESWRLACQTIV 154
++E LK+ S+RL+CQ +V
Sbjct: 60 EDSERNTLKRFQGDEALDGSFRLSCQAVV 88
>gi|21673484|ref|NP_661549.1| chlorosome envelope protein X [Chlorobium tepidum TLS]
gi|21646590|gb|AAM71891.1| chlorosome envelope protein X [Chlorobium tepidum TLS]
Length = 221
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG C TC V +++G +LL+ ++ E L K E R+ACQT++ E GK+
Sbjct: 33 CGGNAICQTCYVRVLEGAELLSPMSDAEKAMLSDKLIKEGTRMACQTLI---EKPGKI-- 87
Query: 166 RTMFLLNLLAFLQKEMRVTSLNHSKLPS 193
+L+ ++ R+T N +LP+
Sbjct: 88 ------TVLSEVEAAKRLTLENPLQLPA 109
>gi|448502973|ref|ZP_21612837.1| ferredoxin [Halorubrum coriense DSM 10284]
gi|445693375|gb|ELZ45527.1| ferredoxin [Halorubrum coriense DSM 10284]
Length = 127
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 70 DGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDL 127
DG VE A+ + LR +MLD + YA + +NCGG G C TC V + +G D
Sbjct: 27 DGDERVE--LAVERGRNLRRVMLDAGLSPYAAATRRLNCGGRGLCATCGVRVREGPAADH 84
Query: 128 LNERTNTELRYLKKKPESWRLACQTIV 154
++R Y RL+CQ V
Sbjct: 85 WHDRLADRFGYP-------RLSCQISV 104
>gi|443313400|ref|ZP_21043011.1| ferredoxin [Synechocystis sp. PCC 7509]
gi|442776343|gb|ELR86625.1| ferredoxin [Synechocystis sp. PCC 7509]
Length = 112
Score = 42.7 bits (99), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++L+N I LY ++NC G G+CGTC V +++G+ ++E T + P S
Sbjct: 19 LRQVLLNNDINLYNGNASIINCHGLGTCGTCAV-MVEGE--VSEVTWQDKTRRSLPPHSP 75
Query: 146 ---WRLACQTIV 154
RLACQT V
Sbjct: 76 TKNLRLACQTKV 87
>gi|374587368|ref|ZP_09660460.1| adenylate/guanylate cyclase [Leptonema illini DSM 21528]
gi|373876229|gb|EHQ08223.1| adenylate/guanylate cyclase [Leptonema illini DSM 21528]
Length = 538
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQT 152
CGG C TC V ++DG D L +T+ E + +KK E RLACQ
Sbjct: 38 CGGNARCSTCRVMVLDGMDNLEPQTDEEKKLARKKNFEEGIRLACQA 84
>gi|307261409|ref|ZP_07543083.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
gi|306868899|gb|EFN00702.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 12 str.
1096]
Length = 121
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 33 DNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDK---AWGLEM 89
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG ++
Sbjct: 90 DSRLSCQCVVGEED 103
>gi|329123602|ref|ZP_08252162.1| ferredoxin [Haemophilus aegyptius ATCC 11116]
gi|327469801|gb|EGF15266.1| ferredoxin [Haemophilus aegyptius ATCC 11116]
Length = 113
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE T+ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFDSLNETTDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VGN++
Sbjct: 82 DSRLSCQCVVGNED 95
>gi|92113698|ref|YP_573626.1| Na(+)-translocating NADH-quinone reductase subunit F
[Chromohalobacter salexigens DSM 3043]
gi|91796788|gb|ABE58927.1| NADH:ubiquinone oxidoreductase, subunit F [Chromohalobacter
salexigens DSM 3043]
Length = 410
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGGSC C ++DG L E ++ LR +K E WRL+CQ V
Sbjct: 73 CGGGGSCAQCRCRVVDGGGSILPTEESHFTLR---EKKEGWRLSCQVPV 118
>gi|307256977|ref|ZP_07538753.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|307263589|ref|ZP_07545203.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
gi|306864461|gb|EFM96368.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 10 str.
D13039]
gi|306871052|gb|EFN02782.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 13 str.
N273]
Length = 121
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 33 DNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDK---AWGLEM 89
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG ++
Sbjct: 90 DSRLSCQCVVGEED 103
>gi|322514673|ref|ZP_08067701.1| ferredoxin [Actinobacillus ureae ATCC 25976]
gi|322119371|gb|EFX91480.1| ferredoxin [Actinobacillus ureae ATCC 25976]
Length = 113
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 25 DNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG ++
Sbjct: 82 DSRLSCQCVVGEED 95
>gi|53729020|ref|ZP_00134288.2| COG0633: Ferredoxin [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307245835|ref|ZP_07527920.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|307247911|ref|ZP_07529945.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|307252549|ref|ZP_07534444.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307254808|ref|ZP_07536634.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259250|ref|ZP_07540979.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
gi|306853195|gb|EFM85415.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 1 str.
4074]
gi|306855561|gb|EFM87730.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str.
S1536]
gi|306859954|gb|EFM91972.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306862179|gb|EFM94147.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866617|gb|EFM98476.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 11 str.
56153]
Length = 121
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 33 DNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDK---AWGLEM 89
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG ++
Sbjct: 90 DSRLSCQCVVGEED 103
>gi|190150251|ref|YP_001968776.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189915382|gb|ACE61634.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 113
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 25 DNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG ++
Sbjct: 82 DSRLSCQCVVGEED 95
>gi|307250166|ref|ZP_07532125.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
gi|306857797|gb|EFM89894.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 4 str.
M62]
Length = 121
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 33 DNLLELAHNAGVEIHNACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDK---AWGLEM 89
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG ++
Sbjct: 90 DSRLSCQCVVGEED 103
>gi|21673483|ref|NP_661548.1| chlorosome envelope protein J [Chlorobium tepidum TLS]
gi|13878451|sp|O68983.1|CSMJ_CHLTE RecName: Full=Chlorosome protein J
gi|3089164|gb|AAC14870.1| chlorosome envelope protein J [Chlorobaculum tepidum]
gi|21646589|gb|AAM71890.1| chlorosome envelope protein J [Chlorobium tepidum TLS]
Length = 225
Score = 42.4 bits (98), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C +C V +++G + L+E E ++ K E RLAC+T + KE + +V +
Sbjct: 33 CGGNGICQSCFVYVLEGAECLSEPGEDEKAFISDKLFAEGGRLACRTTI-VKEGTIRVLT 91
Query: 166 RT------MFLLNLLAFLQKEMRVTSLNHSKLPS 193
R + LN+ F+ + +KLPS
Sbjct: 92 RAEKFRRIVLGLNVPGFITYAQTIGYNVTNKLPS 125
>gi|126208400|ref|YP_001053625.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165976343|ref|YP_001651936.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|303251405|ref|ZP_07337582.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|303252967|ref|ZP_07339122.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|407691994|ref|YP_006816783.1| ferredoxin [Actinobacillus suis H91-0380]
gi|126097192|gb|ABN74020.1| 2Fe-2S ferredoxin [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165876444|gb|ABY69492.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|302648158|gb|EFL78359.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|302649759|gb|EFL79938.1| ferredoxin [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|407388051|gb|AFU18544.1| ferredoxin [Actinobacillus suis H91-0380]
Length = 113
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C G +C TC V I +G D LNE T+ E L K +W
Sbjct: 25 DNLLELAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNETTDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG ++
Sbjct: 82 DSRLSCQCVVGEED 95
>gi|387895489|ref|YP_006325786.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens A506]
gi|388467273|ref|ZP_10141483.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas synxantha BG33R]
gi|387159984|gb|AFJ55183.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens A506]
gi|388010853|gb|EIK72040.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas synxantha BG33R]
Length = 113
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A +G+ LL ++ DN IE+ + CGG +C TC I G D LNE + E Y
Sbjct: 20 EAETGKSLL-DVAHDNHIEIESA------CGGVNACTTCHCIIRKGFDSLNEADDLEEDY 72
Query: 139 LKK----KPESWRLACQTIVGNKE 158
L + +P S RL+CQ VG ++
Sbjct: 73 LDRAWGLEPTS-RLSCQAKVGTED 95
>gi|119512495|ref|ZP_01631575.1| hypothetical protein N9414_16761 [Nodularia spumigena CCY9414]
gi|119462845|gb|EAW43802.1| hypothetical protein N9414_16761 [Nodularia spumigena CCY9414]
Length = 112
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 83 GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK 142
G KL R ++ N I+LY K++NC G GSCGTC V++ N R
Sbjct: 16 GAKLGR-VLQHNGIDLYNGGAKLINCRGIGSCGTCAVKVEGEVSAANWRDKARRSLPPHS 74
Query: 143 PES-WRLACQTIV 154
P + RLACQT V
Sbjct: 75 PTAELRLACQTQV 87
>gi|21674204|ref|NP_662269.1| chlorosome envelope protein I [Chlorobium tepidum TLS]
gi|21647368|gb|AAM72611.1| chlorosome envelope protein I [Chlorobium tepidum TLS]
Length = 244
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 99 YATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGN 156
+A G V CGG G C C + + +G D L T+ E +L ++ R+ACQ +
Sbjct: 26 HAHVGYV--CGGHGLCQACYITVQEGADCLAPLTDVEKAFLSPRQIAAGGRMACQATIA- 82
Query: 157 KENSGKVCSR 166
KE + KV SR
Sbjct: 83 KEGTVKVLSR 92
>gi|193212443|ref|YP_001998396.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
gi|193085920|gb|ACF11196.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
Length = 233
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 78 AKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELR 137
A+A GE + + L+ +A G V CGG G C C V + +G D L T+ E
Sbjct: 10 AQATVGETVGKAARLN-----HAHVGYV--CGGHGLCQACYVTVQEGADCLGPLTDVEKA 62
Query: 138 YL--KKKPESWRLACQTIVGNKENSGKVCSR 166
+L ++ R+ACQ + KE + KV SR
Sbjct: 63 FLSPRQIAAGGRMACQATLA-KEGTVKVLSR 92
>gi|330444434|ref|YP_004377420.1| ferredoxin IV [Chlamydophila pecorum E58]
gi|328807544|gb|AEB41717.1| ferredoxin IV [Chlamydophila pecorum E58]
Length = 91
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYL-KKKPESWRLACQTIV 154
G CGTC+VE+++GK+ L+E T E +L + E+ RLACQ +
Sbjct: 39 GVCGTCVVEVLEGKENLSEFTEAERDFLGDSEDENERLACQCHI 82
>gi|13878452|sp|O68988.1|CSMI_CHLTE RecName: Full=Chlorosome protein I
gi|3089171|gb|AAC14875.1| chlorosome envelope protein I [Chlorobaculum tepidum]
Length = 244
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 99 YATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGN 156
+A G V CGG G C C + + +G D L T+ E +L ++ R+ACQ +
Sbjct: 26 HAHVGYV--CGGHGLCQACYITVQEGADCLAPLTDVEKAFLSPRQIAAGGRIACQATIA- 82
Query: 157 KENSGKVCSR 166
KE + KV SR
Sbjct: 83 KEGTVKVLSR 92
>gi|389848960|ref|YP_006351196.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|448619385|ref|ZP_21667322.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|388246266|gb|AFK21209.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|445745991|gb|ELZ97457.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
Length = 110
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR +LD + + + NC G CGTC VEI++G ++ T E R LK P S
Sbjct: 19 LRQTLLDAGLSPHNGKAQYTNCRGNALCGTCAVEIVEGD--VSNPTGKERRRLKLPPHSL 76
Query: 146 ---WRLACQTIV 154
RL+CQ +
Sbjct: 77 DSGLRLSCQLTI 88
>gi|167838540|ref|ZP_02465399.1| ferredoxin [Burkholderia thailandensis MSMB43]
gi|424906120|ref|ZP_18329623.1| ferredoxin [Burkholderia thailandensis MSMB43]
gi|390929013|gb|EIP86417.1| ferredoxin [Burkholderia thailandensis MSMB43]
Length = 99
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTE---LRYLKKKPESWRLACQTIV 154
G+CG C++E+++G+D L +R+ E L L +++RLACQ V
Sbjct: 41 GACGACVIEVLEGRDQLGKRSTGESAFLDTLGYAGDAFRLACQCRV 86
>gi|334120022|ref|ZP_08494105.1| ferredoxin [Microcoleus vaginatus FGP-2]
gi|333457204|gb|EGK85829.1| ferredoxin [Microcoleus vaginatus FGP-2]
Length = 112
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES- 145
LR ++L N I++Y KV+NC G G+CGTC V + R L P S
Sbjct: 19 LREVLLKNGIDVYNGNAKVINCHGLGTCGTCAVTVEGEVSESQWREKARLSVPPHSPASN 78
Query: 146 WRLACQTIV 154
RL+C T V
Sbjct: 79 RRLSCHTKV 87
>gi|389879632|ref|YP_006381862.1| ferredoxin [Tistrella mobilis KA081020-065]
gi|388531022|gb|AFK56217.1| ferredoxin [Tistrella mobilis KA081020-065]
Length = 590
Score = 42.0 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK--KKPESWRLACQ 151
CGG G C TC V ++DG+D L E L+ + P RLACQ
Sbjct: 298 CGGQGRCSTCRVRVLDGRDQLPPPRAVEAEMLRRIRAPGDVRLACQ 343
>gi|336399694|ref|ZP_08580494.1| NADH:ubiquinone oxidoreductase, subunit F [Prevotella
multisaccharivorax DSM 17128]
gi|336069430|gb|EGN58064.1| NADH:ubiquinone oxidoreductase, subunit F [Prevotella
multisaccharivorax DSM 17128]
Length = 422
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 93 DNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLAC 150
DN I L + CGG GSCG C +++++G E +TE + +K + WRL C
Sbjct: 60 DNGIHLSSA------CGGKGSCGQCRLQVLEGG---GEILDTEKGHFSRKEIKDHWRLGC 110
Query: 151 QTIV 154
QT V
Sbjct: 111 QTKV 114
>gi|429742342|ref|ZP_19275985.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas catoniae
F0037]
gi|429157388|gb|EKX99988.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas catoniae
F0037]
Length = 413
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGNKENSGKVCS 165
CGG GSCG C +++G E TE + K++ E WRL+CQT V KE+ +
Sbjct: 70 CGGSGSCGQCRCRVVEGG---GEILPTETGFFSRKEQKEHWRLSCQTKV--KEDMQVIVP 124
Query: 166 RTMF 169
++F
Sbjct: 125 ESVF 128
>gi|423693452|ref|ZP_17667972.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens SS101]
gi|387997717|gb|EIK59046.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens SS101]
Length = 113
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A +G+ LL ++ DN IE+ + CGG +C TC I G D LNE + E Y
Sbjct: 20 EAETGKSLL-DVAHDNHIEIESA------CGGVNACTTCHCIIRKGFDSLNEADDLEEDY 72
Query: 139 LKKKPESW------RLACQTIVGNKE 158
L + +W RL+CQ VG ++
Sbjct: 73 LDR---AWGLEATSRLSCQAKVGTED 95
>gi|367037881|ref|XP_003649321.1| hypothetical protein THITE_2107816 [Thielavia terrestris NRRL 8126]
gi|346996582|gb|AEO62985.1| hypothetical protein THITE_2107816 [Thielavia terrestris NRRL 8126]
Length = 199
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 13 STQPPELCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGS 72
S+QPP +RRS + + S RP VS AV+ P+P + E+ + FI
Sbjct: 48 SSQPP---IRRSLWSAAFQS--RPFSVSTAVSHGHIQPPKPGE-ELYVTFIDKEG----- 96
Query: 73 YPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK--DLLNE 130
VE A+S L +I + +E+ CGG +C TC V ++D + D + E
Sbjct: 97 --VEHKLAVSKGDNLLDIAQAHDLEMEGA------CGGSCACSTCHVIVMDQEYYDRMPE 148
Query: 131 RTNTELRYLKKK---PESWRLACQTIVGNKENSGKV 163
+ E L E+ RL CQ ++ + N +V
Sbjct: 149 PDDDENDMLDLAFGLQETSRLGCQVVMTPELNGLRV 184
>gi|448712812|ref|ZP_21701841.1| ferredoxin [Halobiforma nitratireducens JCM 10879]
gi|445790238|gb|EMA40907.1| ferredoxin [Halobiforma nitratireducens JCM 10879]
Length = 129
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-- 143
LLR+ +L+ + + +NCGG +CGTC V +DG +++ T E R L P
Sbjct: 18 LLRDALLEAGLTPHNGTTDRLNCGGRATCGTCAVR-VDGD--VSDPTAAEKRRLGVPPLR 74
Query: 144 --ESWRLACQTIV 154
+ RLACQT V
Sbjct: 75 GRKGLRLACQTAV 87
>gi|434385330|ref|YP_007095941.1| ferredoxin [Chamaesiphon minutus PCC 6605]
gi|428016320|gb|AFY92414.1| ferredoxin [Chamaesiphon minutus PCC 6605]
Length = 118
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-- 144
LR +L I+LY K+ NC G G CGTC+V++ + ++ T E R P
Sbjct: 19 LREALLAQDIDLYNAGAKIFNCHGHGICGTCLVQV---EGSVSVPTAAETRPTLLHPHVN 75
Query: 145 --SWRLACQTIV 154
RLACQT V
Sbjct: 76 DNKRRLACQTKV 87
>gi|374629303|ref|ZP_09701688.1| ferredoxin [Methanoplanus limicola DSM 2279]
gi|373907416|gb|EHQ35520.1| ferredoxin [Methanoplanus limicola DSM 2279]
Length = 612
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQ 151
CGG G+CG C V+II LNE T TE L + +RLACQ
Sbjct: 41 CGGAGTCGKCRVQIIRHYGSLNELTRTEEEKLSDDEIKDGYRLACQ 86
>gi|374581506|ref|ZP_09654600.1| putative metal-binding protein [Desulfosporosinus youngiae DSM
17734]
gi|374417588|gb|EHQ90023.1| putative metal-binding protein [Desulfosporosinus youngiae DSM
17734]
Length = 636
Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG G+CG C VEII G ++N N L K RLAC+T V
Sbjct: 38 CGGKGTCGACKVEIISGDPIVNGTGNLTPEQLSK---GIRLACKTSV 81
>gi|302336562|ref|YP_003801768.1| ferredoxin [Spirochaeta smaragdinae DSM 11293]
gi|301633747|gb|ADK79174.1| ferredoxin [Spirochaeta smaragdinae DSM 11293]
Length = 105
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK----PESWRLACQTIV 154
CGG CGTC V+I+DG+ + E L K PES RLACQT +
Sbjct: 36 CGGKAQCGTCRVKILDGESFCSPMGERERLRLSGKEGTLPESVRLACQTYI 86
>gi|409098300|ref|ZP_11218324.1| ferredoxin [Pedobacter agri PB92]
Length = 110
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133
PVE A +GE +L ++ LDN IEL NCGG C TC V + G D + E ++
Sbjct: 17 PVELPIA-AGESVL-DVCLDNGIELQH------NCGGVCGCSTCHVYVTKGMDNIEEISD 68
Query: 134 TELRYLKK--KPE-SWRLACQTIV 154
E ++ + +P + RL CQ +V
Sbjct: 69 KEEDFIDRAVRPRITSRLGCQCVV 92
>gi|427713565|ref|YP_007062189.1| ferredoxin [Synechococcus sp. PCC 6312]
gi|427377694|gb|AFY61646.1| ferredoxin [Synechococcus sp. PCC 6312]
Length = 160
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133
P+ R +I+ + + +LD+++ + + CGG G C TC V I DG D L+ T
Sbjct: 9 PIARETSINTNDNILSALLDSELHV------LKECGGRGMCATCHVFIKDGMDSLSPLTR 62
Query: 134 TELRYLKK----KPESWRLACQT-IVG 155
E R L+ KP S RLACQ +VG
Sbjct: 63 REQRTLEVITTCKPNS-RLACQARVVG 88
>gi|56695803|ref|YP_166154.1| guanylate cyclase [Ruegeria pomeroyi DSS-3]
gi|56677540|gb|AAV94206.1| adenylate/guanylate cyclase [Ruegeria pomeroyi DSS-3]
Length = 565
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQ 151
CGG G C TC V I G DLL+ + ELR L+ P + RLACQ
Sbjct: 290 CGGKGRCTTCRVVIEAGADLLHPPSEVELRSLRAVGAPPNTRLACQ 335
>gi|448311884|ref|ZP_21501637.1| ferredoxin [Natronolimnobius innermongolicus JCM 12255]
gi|445603505|gb|ELY57467.1| ferredoxin [Natronolimnobius innermongolicus JCM 12255]
Length = 126
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE 144
++LR+++L+ + +NC G G+CGTC V I + ++E T E R L P
Sbjct: 22 RILRDVLLEADESPHNGRANYLNCRGHGTCGTCAVAI---EGAVSEPTAAERRRLSIPPH 78
Query: 145 S----WRLACQTIV 154
RL+CQT V
Sbjct: 79 DPDSGLRLSCQTRV 92
>gi|387790123|ref|YP_006255188.1| ferredoxin [Solitalea canadensis DSM 3403]
gi|379652956|gb|AFD06012.1| ferredoxin [Solitalea canadensis DSM 3403]
Length = 110
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 69 DDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLL 128
++G PVE A GE +L ++ L+N IEL NCGG C TC + +++G D +
Sbjct: 12 EEGKEPVELTIA-EGESVL-DVALENDIELQH------NCGGVCGCSTCHIYVLNGMDNI 63
Query: 129 NERTNTELRYLKKKPE---SWRLACQTIV--GNKE 158
+ ++ E ++ + + RL CQ ++ GN E
Sbjct: 64 QDISDKEEDFIDRAVNPKITSRLGCQCVIIDGNIE 98
>gi|193212319|ref|YP_001998272.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
gi|193085796|gb|ACF11072.1| ferredoxin [Chlorobaculum parvum NCIB 8327]
Length = 224
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--P 143
LL N +NK A G + CGG C +C V +++G D L++ E ++ K
Sbjct: 17 LLLNTAKNNK----AHIGYI--CGGNAICQSCFVYVLEGADCLSQPGEDEKAFISDKLFA 70
Query: 144 ESWRLACQTIVGNKENSGKVCS------RTMFLLNLLAFLQKEMRVTSLNHSKLPS 193
E RLAC+T + KE + +V + RT+ LN+ F+ + + LPS
Sbjct: 71 EGGRLACRTTI-IKEGTVRVLTRAEKFRRTVLGLNVPGFITYAQTIGYNVTTMLPS 125
>gi|251772771|gb|EES53333.1| ferredoxin [Leptospirillum ferrodiazotrophum]
Length = 100
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 90 IMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK---PESW 146
++L ++ +G V C G +C TC+V++++G D L R + E +L K +
Sbjct: 20 LLLQGAMDQGVAFGFV--CAGESACATCLVKVVEGLDSLPPRNSVE-DFLSKAMLLETDY 76
Query: 147 RLACQTIVGN 156
RLACQT G+
Sbjct: 77 RLACQTPAGS 86
>gi|359687961|ref|ZP_09257962.1| adenylate/guanylate cyclase [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750300|ref|ZP_13306586.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
licerasiae str. MMD4847]
gi|418758764|ref|ZP_13314946.1| 2Fe-2S iron-sulfur cluster-binding domain / adenylate/guanylate
cyclase catalytic domain / peroxidase multi-domain
protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384114666|gb|EIE00929.1| 2Fe-2S iron-sulfur cluster-binding domain / adenylate/guanylate
cyclase catalytic domain / peroxidase multi-domain
protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404272903|gb|EJZ40223.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
licerasiae str. MMD4847]
Length = 576
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 95 KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQT 152
+I L A + CGG C TC V I DG + L R E +KK P++ RLACQT
Sbjct: 59 QISLDAGIPHIHACGGNARCSTCRVLIQDGDEHLLPRNEKETTLAQKKGFPDNVRLACQT 118
>gi|300727041|ref|ZP_07060460.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bryantii B14]
gi|299775585|gb|EFI72176.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bryantii B14]
Length = 422
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIVGN 156
CGG GSCG C ++++G E +TE + +K + WRL CQT V N
Sbjct: 69 CGGKGSCGQCRCQVLEGG---GEILDTEKGHFTRKEIKDHWRLGCQTKVKN 116
>gi|399519569|ref|ZP_10760364.1| 2Fe-2S ferredoxin [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112665|emb|CCH36922.1| 2Fe-2S ferredoxin [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 113
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------RLACQTIVGNKE 158
CGG +C TC + +G D LNE E YL K +W RLACQ IVG ++
Sbjct: 42 CGGVCACTTCHCIVREGFDSLNEADELEEDYLDK---AWGLEAQSRLACQAIVGEED 95
>gi|320103758|ref|YP_004179349.1| ferredoxin [Isosphaera pallida ATCC 43644]
gi|319751040|gb|ADV62800.1| ferredoxin [Isosphaera pallida ATCC 43644]
Length = 157
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 105 VMNCGGGGSCGTCIVEIIDGKDLL---NERTNTELRYLKKKPESWRLACQ 151
+M+CGG G C TC V I +G D L ER N L Y+ RLACQ
Sbjct: 33 LMSCGGKGLCSTCHVYIKEGMDRLTPRTERENRTLSYVTSVTPQSRLACQ 82
>gi|146308521|ref|YP_001188986.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas mendocina ymp]
gi|145576722|gb|ABP86254.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas mendocina ymp]
Length = 113
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------RLACQTIVGNKE 158
CGG +C TC + +G D LNE E YL K +W RLACQ IVG ++
Sbjct: 42 CGGVCACTTCHCIVREGFDSLNEADELEEDYLDK---AWGLEAQSRLACQAIVGEED 95
>gi|330504685|ref|YP_004381554.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas mendocina NK-01]
gi|328918971|gb|AEB59802.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas mendocina NK-01]
Length = 113
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------RLACQTIVGNKE 158
CGG +C TC + +G D LNE E YL K +W RLACQ IVG ++
Sbjct: 42 CGGVCACTTCHCIVREGFDSLNEADELEEDYLDK---AWGLEAHSRLACQAIVGEED 95
>gi|110598533|ref|ZP_01386802.1| Ferredoxin [Chlorobium ferrooxidans DSM 13031]
gi|110339837|gb|EAT58343.1| Ferredoxin [Chlorobium ferrooxidans DSM 13031]
Length = 226
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C +C V + +GK L+ N E ++ +K E RLACQ+++ KE V S
Sbjct: 33 CGGNGICQSCFVYVREGKGTLSAPNNIEKAFISEKLFQEGGRLACQSVI-VKEGPLSVLS 91
Query: 166 RTMFL------LNLLAFLQKEMRVTSLNHSKLP 192
R L LN+ F+ + +KLP
Sbjct: 92 RAEHLRRIVLGLNIPGFVTYARTIGYNVTNKLP 124
>gi|421504544|ref|ZP_15951485.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina DLHK]
gi|400344502|gb|EJO92871.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina DLHK]
Length = 407
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + DN I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-DNNIFLSSA------CGGGGTCAQCKCIVESGGGEMLSTEESHFTKREA 102
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 103 R---EGWRLSCQTPV 114
>gi|374384275|ref|ZP_09641801.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Odoribacter laneus YIT 12061]
gi|373228882|gb|EHP51185.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Odoribacter laneus YIT 12061]
Length = 422
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKEN 159
CGG GSCG C +++ G + T T K++ ++WRLACQ V KEN
Sbjct: 76 CGGKGSCGMCKCQVLSGAGSI-LPTETGFFSYKQQHDNWRLACQVKV--KEN 124
>gi|448615613|ref|ZP_21664376.1| ferredoxin-like protein [Haloferax mediterranei ATCC 33500]
gi|445751744|gb|EMA03175.1| ferredoxin-like protein [Haloferax mediterranei ATCC 33500]
Length = 110
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE- 144
+LR+++ + + +NC G GSCGTC V + + + RT E R L+ P
Sbjct: 18 VLRDVLRGAGEPPHNGHSSWLNCHGRGSCGTCAVRV---QGPVTYRTKKETRRLRLPPHD 74
Query: 145 ---SWRLACQTIV 154
RLACQT+V
Sbjct: 75 PDSGLRLACQTLV 87
>gi|152987897|ref|YP_001347537.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PA7]
gi|452880172|ref|ZP_21957187.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa VRFPA01]
gi|189030476|sp|A6V3A2.1|NQRF_PSEA7 RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|150963055|gb|ABR85080.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, f subunit
[Pseudomonas aeruginosa PA7]
gi|452183350|gb|EME10368.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa VRFPA01]
Length = 407
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C ++DG E TE + +
Sbjct: 51 AGGKLLQTLAANNVFLSSA-------CGGGGTCAQCKCVVVDGG---GEMLPTEESHFTR 100
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 RQAKEGWRLSCQTPV 115
>gi|146306631|ref|YP_001187096.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina ymp]
gi|145574832|gb|ABP84364.1| NADH:ubiquinone oxidoreductase, subunit F [Pseudomonas mendocina
ymp]
Length = 407
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + DN I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-DNNIFLSSA------CGGGGTCAQCKCIVESGGGEMLSTEESHFTKREA 102
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 103 R---EGWRLSCQTPV 114
>gi|421505108|ref|ZP_15952048.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas mendocina DLHK]
gi|400344331|gb|EJO92701.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas mendocina DLHK]
Length = 113
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------RLACQTIVGNKE 158
CGG +C TC + +G D LNE E YL K +W RLACQ IVG ++
Sbjct: 42 CGGVCACTTCHCIVREGFDSLNEADELEEDYLDK---AWGLEAQSRLACQAIVGGED 95
>gi|338733010|ref|YP_004671483.1| ferredoxin-4 [Simkania negevensis Z]
gi|336482393|emb|CCB88992.1| ferredoxin-4 [Simkania negevensis Z]
Length = 86
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQT 152
G CGTC++E+ +G + L+E T EL +L ++ E+ RLACQ
Sbjct: 36 GVCGTCVIEVEEGMEHLSEFTQEELDFLGEQ-ETERLACQC 75
>gi|333980086|ref|YP_004518031.1| ferredoxin [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823567|gb|AEG16230.1| ferredoxin [Desulfotomaculum kuznetsovii DSM 6115]
Length = 611
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG G CG C V +++G+ + E+R L KK E +RLACQ ++
Sbjct: 41 CGGKGLCGRCRVRLVEGE--FSPPNEVEVRLLGKKGLEEGYRLACQAVI 87
>gi|16272320|ref|NP_438533.1| ferredoxin [Haemophilus influenzae Rd KW20]
gi|68248975|ref|YP_248087.1| (2Fe-2S) ferredoxin [Haemophilus influenzae 86-028NP]
gi|145632619|ref|ZP_01788353.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 3655]
gi|145634632|ref|ZP_01790341.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittAA]
gi|145636360|ref|ZP_01792029.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittHH]
gi|145638719|ref|ZP_01794328.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittII]
gi|145640322|ref|ZP_01795906.1| ferredoxin, 2Fe-2S [Haemophilus influenzae R3021]
gi|148825345|ref|YP_001290098.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittEE]
gi|148827511|ref|YP_001292264.1| hypothetical protein CGSHiGG_04670 [Haemophilus influenzae PittGG]
gi|229844540|ref|ZP_04464680.1| hypothetical protein CGSHi6P18H1_09500 [Haemophilus influenzae
6P18H1]
gi|229846459|ref|ZP_04466567.1| hypothetical protein CGSHi7P49H1_07300 [Haemophilus influenzae
7P49H1]
gi|260580565|ref|ZP_05848393.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae RdAW]
gi|260582536|ref|ZP_05850326.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae NT127]
gi|319775761|ref|YP_004138249.1| ferredoxin, 2Fe-2S [Haemophilus influenzae F3047]
gi|319896701|ref|YP_004134894.1| ferredoxin, 2fe-2S [Haemophilus influenzae F3031]
gi|378696555|ref|YP_005178513.1| [2Fe-2S] ferredoxin [Haemophilus influenzae 10810]
gi|386265233|ref|YP_005828725.1| [2FE-2S] ferredoxin, electron carrer protein [Haemophilus
influenzae R2846]
gi|1169674|sp|P44428.2|FER_HAEIN RecName: Full=2Fe-2S ferredoxin
gi|1573341|gb|AAC22030.1| ferredoxin (fdx-1) [Haemophilus influenzae Rd KW20]
gi|68057174|gb|AAX87427.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 86-028NP]
gi|144986814|gb|EDJ93366.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 3655]
gi|145268177|gb|EDK08172.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittAA]
gi|145270525|gb|EDK10459.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittHH]
gi|145272314|gb|EDK12222.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittII]
gi|145274908|gb|EDK14770.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 22.4-21]
gi|148715505|gb|ABQ97715.1| ferredoxin, 2Fe-2S [Haemophilus influenzae PittEE]
gi|148718753|gb|ABQ99880.1| hypothetical protein CGSHiGG_04670 [Haemophilus influenzae PittGG]
gi|229810552|gb|EEP46270.1| hypothetical protein CGSHi7P49H1_07300 [Haemophilus influenzae
7P49H1]
gi|229812789|gb|EEP48478.1| hypothetical protein CGSHi6P18H1_09500 [Haemophilus influenzae
6P18H1]
gi|260092907|gb|EEW76842.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae RdAW]
gi|260094347|gb|EEW78245.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus influenzae NT127]
gi|301169074|emb|CBW28671.1| [2Fe-2S] ferredoxin [Haemophilus influenzae 10810]
gi|309750209|gb|ADO80193.1| [2FE-2S] ferredoxin, electron carrer protein [Haemophilus
influenzae R2866]
gi|309972469|gb|ADO95670.1| [2FE-2S] ferredoxin, electron carrer protein [Haemophilus
influenzae R2846]
gi|317432203|emb|CBY80555.1| ferredoxin, 2Fe-2S [Haemophilus influenzae F3031]
gi|317450352|emb|CBY86568.1| ferredoxin, 2Fe-2S [Haemophilus influenzae F3047]
Length = 113
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFDSLNETSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VGN++
Sbjct: 82 DSRLSCQCVVGNED 95
>gi|424863189|ref|ZP_18287102.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86A]
gi|400757810|gb|EJP72021.1| NADH:ubiquinone oxidoreductase, F subunit [SAR86 cluster bacterium
SAR86A]
Length = 408
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL + DN I L + CGGGG+C C ++ +G + + +K
Sbjct: 52 AGSKLLTT-LADNNIFLASA------CGGGGTCSQCKCQVFEGGGSILAAEESHFNATQK 104
Query: 142 KPESWRLACQTIVGN 156
K + WRL+CQ V N
Sbjct: 105 K-DGWRLSCQVPVKN 118
>gi|399521390|ref|ZP_10762130.1| NqrF [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399110628|emb|CCH38690.1| NqrF [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 407
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + DN I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-DNGIFLSSA------CGGGGTCAQCKCIVESGGGEMLSTEESHFTKREA 102
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 103 R---EGWRLSCQTPV 114
>gi|448457344|ref|ZP_21595764.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
gi|445810660|gb|EMA60677.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
Length = 104
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 72 SYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
SY E + G+ +LR+++ + + +Y K +NC G GSCG+C V++ ++
Sbjct: 5 SYQGEEIECEKGD-VLRDVLAEAGLSVYNGKMKQLNCRGSGSCGSCAVQVDGEVSEPGKK 63
Query: 132 TNTELRYLKKKP-ESWRLACQTIV 154
L + P RLACQT V
Sbjct: 64 EKARLWFPPHHPSHDVRLACQTKV 87
>gi|83645468|ref|YP_433903.1| Na(+)-translocating NADH-quinone reductase subunit F [Hahella
chejuensis KCTC 2396]
gi|83633511|gb|ABC29478.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Hahella chejuensis KCTC 2396]
Length = 408
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGGSC C ++ DG L ER + R ++ E WRL+CQ V
Sbjct: 71 CGGGGSCAQCKCKVFDGGGSMLPTERAHFTRR---EEKEGWRLSCQVAV 116
>gi|255528511|ref|ZP_05395295.1| ferredoxin [Clostridium carboxidivorans P7]
gi|255507793|gb|EET84249.1| ferredoxin [Clostridium carboxidivorans P7]
Length = 607
Score = 40.8 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 12/81 (14%)
Query: 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135
E K SGE L N+++DN+I + + C G G CG C V+++ G L E T+ +
Sbjct: 19 EVIKVKSGENLF-NVLMDNRIFIDSP------CNGKGICGKCKVKVVKG---LKEPTSLD 68
Query: 136 LRYLKKK--PESWRLACQTIV 154
+++L K+ +RL+C +
Sbjct: 69 IKHLTKEELESGFRLSCNLTI 89
>gi|162447824|ref|YP_001620956.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Acholeplasma laidlawii PG-8A]
gi|161985931|gb|ABX81580.1| Na+-transporting NADH:ubiquinone oxidoreductase subunit F
[Acholeplasma laidlawii PG-8A]
Length = 358
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 80 AISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL 139
ISG + N + +NKI L ++ CGG +CGTC ++D + TE+ +L
Sbjct: 45 TISGRETALNALTNNKIFLPSS------CGGKATCGTCKFRLVDWHE---APKPTEIPFL 95
Query: 140 KKK--PESWRLACQTIVGNKENSGKVCSRTMFLLNLLAFLQKEMRVTSLNHS 189
K E RL+CQ +V S +LN+ F K + V L H
Sbjct: 96 SKDEISEGVRLSCQVVVTEDMQVEVPPS----VLNVKPFYGKVVEVEQLTHD 143
>gi|398348014|ref|ZP_10532717.1| adenylate/guanylate cyclase [Leptospira broomii str. 5399]
Length = 543
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 104 KVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
+ CGG C TC V +++G D L+ R + E ++K PE+ RLACQ+ V
Sbjct: 33 HIHACGGNARCSTCRVLVLEGVDNLSPRNDKESALAERKGFPENVRLACQSRV 85
>gi|423097177|ref|ZP_17084973.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens Q2-87]
gi|397889192|gb|EJL05675.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens Q2-87]
Length = 113
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A +G+ +L + DN IE+ + CGG +C TC I +G D LNE E Y
Sbjct: 20 EAETGKSILE-VAHDNHIEIESA------CGGVCACTTCHCVIREGFDSLNEADELEEDY 72
Query: 139 LKK----KPESWRLACQTIVGNKE 158
L K +P S RL CQ VG ++
Sbjct: 73 LDKAWGLEPTS-RLTCQAKVGTED 95
>gi|448308953|ref|ZP_21498824.1| ferredoxin I 5 [Natronorubrum bangense JCM 10635]
gi|445592339|gb|ELY46527.1| ferredoxin I 5 [Natronorubrum bangense JCM 10635]
Length = 112
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 57 EIELEFIAPRAGDDG---SYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGS 113
E+EL I DDG + VER LR+ + D +Y T +NCGG G
Sbjct: 4 EVELTVI-----DDGERSTITVERGTT------LRDALRDRGFSVYGTVSSQLNCGGRGL 52
Query: 114 CGTCIVEIIDGKDLLNERTNTELRY 138
C TC VE+ + ++ +R+
Sbjct: 53 CATCTVEVDPAPEPVHWHDGAAVRF 77
>gi|338212882|ref|YP_004656937.1| ferredoxin [Runella slithyformis DSM 19594]
gi|336306703|gb|AEI49805.1| ferredoxin [Runella slithyformis DSM 19594]
Length = 120
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 102 YGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQ 151
Y + CGG C TC VE+++G D L ++ EL L P + RLACQ
Sbjct: 49 YNILATCGGMALCATCHVEVLEGGDSLPSVSDAELDILDTLPAATSCSRLACQ 101
>gi|373467495|ref|ZP_09558791.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sp. oral taxon 851
str. F0397]
gi|371758529|gb|EHO47296.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus sp. oral taxon 851
str. F0397]
Length = 131
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 43 DNLLEVAHNAGVEIHHACDGSCACTTCHVIIREGFDSLNETSDQEEDMLDK---AWGLEM 99
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG+++
Sbjct: 100 DSRLSCQCVVGDED 113
>gi|325579023|ref|ZP_08148979.1| ferredoxin [Haemophilus parainfluenzae ATCC 33392]
gi|345429689|ref|YP_004822807.1| [2Fe-2S] ferredoxin [Haemophilus parainfluenzae T3T1]
gi|301155750|emb|CBW15218.1| [2Fe-2S] ferredoxin [Haemophilus parainfluenzae T3T1]
gi|325159258|gb|EGC71392.1| ferredoxin [Haemophilus parainfluenzae ATCC 33392]
Length = 113
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNEASDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG+++
Sbjct: 82 DSRLSCQCVVGDED 95
>gi|344213223|ref|YP_004797543.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula hispanica ATCC 33960]
gi|343784578|gb|AEM58555.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula hispanica ATCC 33960]
Length = 111
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++LD + + Y K +NCGG G C TC V + + D + + R+
Sbjct: 24 VLRDVLLDADLSPHGRYAKRVNCGGRGICATCGVRLAEPPDPDHWHDDLADRFSYP---- 79
Query: 146 WRLACQTIV 154
RL+CQ V
Sbjct: 80 -RLSCQLRV 87
>gi|379010426|ref|YP_005268238.1| corrinoid activation/regeneration protein [Acetobacterium woodii
DSM 1030]
gi|375301215|gb|AFA47349.1| corrinoid activation/regeneration protein [Acetobacterium woodii
DSM 1030]
Length = 606
Score = 40.8 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 83 GEKLLRNIMLDNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL- 139
GEKL+ +E + G +++ C G G+CG C V +I GK +E T E + L
Sbjct: 9 GEKLIEVTSNSTLLEAASKAGMLIDGSCNGAGTCGKCKVRMIAGKP--DELTAAEKKILT 66
Query: 140 -KKKPESWRLACQTIVGN 156
++ +RLAC+T+V N
Sbjct: 67 VEEVEAGFRLACKTMVKN 84
>gi|333901481|ref|YP_004475354.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fulva 12-X]
gi|333116746|gb|AEF23260.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fulva 12-X]
Length = 113
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 9/57 (15%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------RLACQTIVGNKE 158
CGG +C TC + G D LNE E YL K +W RLACQ IVG ++
Sbjct: 42 CGGVCACTTCHCIVRKGFDSLNEADELEEDYLDK---AWGLEAQSRLACQAIVGEQD 95
>gi|419801258|ref|ZP_14326495.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK262]
gi|419844435|ref|ZP_14367724.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK2019]
gi|385193989|gb|EIF41335.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK262]
gi|386417346|gb|EIJ31831.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parainfluenzae
HK2019]
Length = 113
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNEASDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG+++
Sbjct: 82 DSRLSCQCVVGDED 95
>gi|313126725|ref|YP_004036995.1| hypothetical protein Hbor_19840 [Halogeometricum borinquense DSM
11551]
gi|448288810|ref|ZP_21480008.1| hypothetical protein C499_18504 [Halogeometricum borinquense DSM
11551]
gi|312293090|gb|ADQ67550.1| uncharacterized metal-binding protein [Halogeometricum borinquense
DSM 11551]
gi|445569195|gb|ELY23770.1| hypothetical protein C499_18504 [Halogeometricum borinquense DSM
11551]
Length = 120
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++L + ++NC G G+CGTC V + +R T L + P+S
Sbjct: 18 VLRDVLLAAGESPHNGSADMLNCRGRGTCGTCAVAVEGAVTDRTKREETRLSFPPHHPDS 77
Query: 146 W-RLACQTIV 154
RL+CQT V
Sbjct: 78 GLRLSCQTRV 87
>gi|194337175|ref|YP_002018969.1| ferredoxin [Pelodictyon phaeoclathratiforme BU-1]
gi|194309652|gb|ACF44352.1| ferredoxin [Pelodictyon phaeoclathratiforme BU-1]
Length = 226
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C +C V + +G D L+ N E ++ K E RLACQ ++ KE + ++ S
Sbjct: 33 CGGNGICQSCFVYVKEGMDSLSAPNNIEKAFISDKLFQEGGRLACQCVI-IKEGTVRLLS 91
Query: 166 RT------MFLLNLLAFLQKEMRVTSLNHSKLP 192
R + LN+ F+ + +KLP
Sbjct: 92 RAENLKRIVLSLNVPGFITYAQTIGYNVVNKLP 124
>gi|408480034|ref|ZP_11186253.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas sp. R81]
Length = 113
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A +G+ +L + DN IE+ + CGG +C TC I +G + LNE E Y
Sbjct: 20 EAETGKSILE-VAHDNHIEIESA------CGGVCACTTCHCVIREGFNSLNEADELEEDY 72
Query: 139 LKKKPESW------RLACQTIVGNKE 158
L + +W RL CQ IVG ++
Sbjct: 73 LDR---AWGLEATSRLTCQAIVGTED 95
>gi|428217953|ref|YP_007102418.1| ferredoxin [Pseudanabaena sp. PCC 7367]
gi|427989735|gb|AFY69990.1| ferredoxin [Pseudanabaena sp. PCC 7367]
Length = 112
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
LR ++L N +++Y K +NC G G+CGTC V++
Sbjct: 19 LRQVLLANGVDVYNGAAKTVNCHGLGTCGTCAVQV 53
>gi|145628728|ref|ZP_01784528.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 22.1-21]
gi|145631825|ref|ZP_01787584.1| ferredoxin, 2Fe-2S [Haemophilus influenzae R3021]
gi|144979198|gb|EDJ88884.1| ferredoxin, 2Fe-2S [Haemophilus influenzae 22.1-21]
gi|144982544|gb|EDJ90098.1| ferredoxin, 2Fe-2S [Haemophilus influenzae R3021]
Length = 97
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE ++ E L K +W
Sbjct: 9 DNLLEVAHNAGVEIHHACDGSCACTTCHVIVREGFDSLNETSDQEEDMLDK---AWGLEM 65
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VGN++
Sbjct: 66 DSRLSCQCVVGNED 79
>gi|251792928|ref|YP_003007654.1| 2Fe-2S type ferredoxin [Aggregatibacter aphrophilus NJ8700]
gi|422336473|ref|ZP_16417446.1| 2Fe-2S ferredoxin [Aggregatibacter aphrophilus F0387]
gi|247534321|gb|ACS97567.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter aphrophilus
NJ8700]
gi|353346659|gb|EHB90944.1| 2Fe-2S ferredoxin [Aggregatibacter aphrophilus F0387]
Length = 113
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ IVG+++
Sbjct: 82 DSRLSCQCIVGDED 95
>gi|325280270|ref|YP_004252812.1| NADH:ubiquinone oxidoreductase, subunit F [Odoribacter splanchnicus
DSM 20712]
gi|324312079|gb|ADY32632.1| NADH:ubiquinone oxidoreductase, subunit F [Odoribacter splanchnicus
DSM 20712]
Length = 422
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKEN 159
CGG GSCG C ++ G + T T K++ E+WRLACQ V KEN
Sbjct: 76 CGGKGSCGMCKCQVDSGAGSI-LPTETGFFSYKQQHENWRLACQVKV--KEN 124
>gi|384104901|ref|ZP_10005838.1| 2Fe-2S ferredoxin [Rhodococcus imtechensis RKJ300]
gi|383837681|gb|EID77080.1| 2Fe-2S ferredoxin [Rhodococcus imtechensis RKJ300]
Length = 106
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 103 GKVMNCGGGGSCGTCIVEII-DGKDLLNERTNTE---LRYLKKKPESWRLACQTIVGNKE 158
G V CGG SC TC V + D + L +E T+ E L YL RL+CQ IV ++
Sbjct: 35 GIVAECGGSCSCATCHVFLDEDSQGLFDEATDEERDLLEYLDGVQSHSRLSCQLIVNDRC 94
Query: 159 NSGKV 163
N +V
Sbjct: 95 NGLRV 99
>gi|443477089|ref|ZP_21066960.1| ferredoxin [Pseudanabaena biceps PCC 7429]
gi|443017860|gb|ELS32216.1| ferredoxin [Pseudanabaena biceps PCC 7429]
Length = 146
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 84 EKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE---LRYLK 140
+KL R++ K+EL AT C G G CGTC + + DG L+ N E L+ ++
Sbjct: 19 DKLWRSLK-HAKVELAAT------CQGQGICGTCALRVFDGASSLSPMENLEQATLKNVR 71
Query: 141 KKPESWRLACQTIV 154
+ +RL CQT V
Sbjct: 72 RDIALYRLTCQTSV 85
>gi|386389960|ref|ZP_10074757.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus
paraphrohaemolyticus HK411]
gi|387773059|ref|ZP_10128657.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parahaemolyticus
HK385]
gi|385694002|gb|EIG24628.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus
paraphrohaemolyticus HK411]
gi|386905548|gb|EIJ70310.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus parahaemolyticus
HK385]
Length = 113
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNESSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ ++G+++
Sbjct: 82 ESRLSCQCVIGDED 95
>gi|240949686|ref|ZP_04754021.1| 2Fe-2S ferredoxin [Actinobacillus minor NM305]
gi|257464491|ref|ZP_05628862.1| 2Fe-2S ferredoxin [Actinobacillus minor 202]
gi|240295944|gb|EER46620.1| 2Fe-2S ferredoxin [Actinobacillus minor NM305]
gi|257450151|gb|EEV24194.1| 2Fe-2S ferredoxin [Actinobacillus minor 202]
Length = 113
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 16/86 (18%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A +GE LL + + +E++ C G +C TC V I +G D LNE ++ E
Sbjct: 20 EAQTGENLLE-VAHNAGVEIHHA------CDGSCACTTCHVVIREGFDSLNESSDQEEDM 72
Query: 139 LKKKPESW------RLACQTIVGNKE 158
L K +W RL+CQ ++G+++
Sbjct: 73 LDK---AWGLEMESRLSCQCVIGDED 95
>gi|152978545|ref|YP_001344174.1| ferredoxin, 2Fe-2S type, ISC system [Actinobacillus succinogenes
130Z]
gi|150840268|gb|ABR74239.1| ferredoxin, 2Fe-2S type, ISC system [Actinobacillus succinogenes
130Z]
Length = 113
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVIREGYDSLNETSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ ++G+++
Sbjct: 82 ESRLSCQCVIGDED 95
>gi|428220782|ref|YP_007104952.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
gi|427994122|gb|AFY72817.1| family 3 adenylate cyclase [Synechococcus sp. PCC 7502]
Length = 342
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK---PESWRLACQTIVGNKENSGKVC 164
CGG C TC + I+DG + T+ E R L KK P RLACQT V SG V
Sbjct: 37 CGGNAYCSTCRIMILDGIQNCSAPTSAE-RALAKKLDFPVHIRLACQTRV-----SGDVA 90
Query: 165 SRTMFLLN 172
R M + N
Sbjct: 91 IRRMVIDN 98
>gi|406966613|gb|EKD91976.1| ferredoxin [uncultured bacterium]
Length = 87
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTE---LRYLKKKPESWRLACQTIV 154
G+CG C++EI+DG++ L+ + E L +L S RLACQ ++
Sbjct: 35 GACGACVIEIVDGQNNLSVMESDEKDFLEFLGLNNGSHRLACQCVI 80
>gi|342904033|ref|ZP_08725835.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
gi|342904665|ref|ZP_08726464.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
gi|417840462|ref|ZP_12486595.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19107]
gi|417840786|ref|ZP_12486894.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19501]
gi|417843011|ref|ZP_12489088.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21127]
gi|341948177|gb|EGT74810.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19107]
gi|341950245|gb|EGT76834.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21127]
gi|341950597|gb|EGT77184.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M19501]
gi|341953086|gb|EGT79600.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
gi|341954042|gb|EGT80536.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21621]
Length = 113
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVIIREGFDSLNETSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG+++
Sbjct: 82 DSRLSCQCVVGDED 95
>gi|255533100|ref|YP_003093472.1| ferredoxin [Pedobacter heparinus DSM 2366]
gi|255346084|gb|ACU05410.1| ferredoxin [Pedobacter heparinus DSM 2366]
Length = 110
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 81 ISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK 140
I+G + + ++ LD+ IEL NCGG C TC V + G D + E ++ E ++
Sbjct: 22 IAGGESVLDVCLDHGIELQH------NCGGVCGCSTCHVYVTRGMDDIQEISDKEEDFID 75
Query: 141 K--KPE-SWRLACQTIV 154
+ +P+ S RL CQ +V
Sbjct: 76 RAVRPKISSRLGCQCVV 92
>gi|417844944|ref|ZP_12490980.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21639]
gi|341956145|gb|EGT82584.1| 2Fe-2S ferredoxin [Haemophilus haemolyticus M21639]
Length = 113
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVIIREGFDSLNETSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG+++
Sbjct: 82 DSRLSCQCVVGDED 95
>gi|343519060|ref|ZP_08756045.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus pittmaniae HK 85]
gi|343392826|gb|EGV05386.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus pittmaniae HK 85]
Length = 120
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 32 DNLLEVAHNAGVEIHHACDGSCACTTCHVVIREGFDSLNEASDQEEDMLDK---AWGLEM 88
Query: 147 --RLACQTIVGNKE 158
RL+CQ IVG ++
Sbjct: 89 DSRLSCQCIVGEED 102
>gi|419839242|ref|ZP_14362655.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus haemolyticus
HK386]
gi|386909550|gb|EIJ74219.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus haemolyticus
HK386]
Length = 113
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVIIREGFDSLNETSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ +VG+++
Sbjct: 82 DSRLSCQCVVGDED 95
>gi|409198108|ref|ZP_11226771.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinilabilia
salmonicolor JCM 21150]
Length = 419
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES--WRLACQTIV 154
CGGGG+C C ++ DG + TE Y +K ++ WRLACQ V
Sbjct: 76 CGGGGTCAMCRCQVHDGAGSI---LPTETGYFTRKEQAADWRLACQVKV 121
>gi|332299361|ref|YP_004441282.1| NADH:ubiquinone oxidoreductase subunit F [Porphyromonas
asaccharolytica DSM 20707]
gi|332176424|gb|AEE12114.1| NADH:ubiquinone oxidoreductase, subunit F [Porphyromonas
asaccharolytica DSM 20707]
Length = 415
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE--SWRLACQTIVGNKENSGKVCS 165
CGG GSCG C +++G E TE + +K + WRL CQT V KE+ +
Sbjct: 72 CGGSGSCGQCRCRVVEGG---GEILATEKGFFSRKEQMAHWRLGCQTKV--KEDLKVIVP 126
Query: 166 RTMF 169
++F
Sbjct: 127 ESVF 130
>gi|300711292|ref|YP_003737106.1| ferredoxin [Halalkalicoccus jeotgali B3]
gi|448296605|ref|ZP_21486660.1| ferredoxin [Halalkalicoccus jeotgali B3]
gi|299124975|gb|ADJ15314.1| ferredoxin [Halalkalicoccus jeotgali B3]
gi|445581110|gb|ELY35473.1| ferredoxin [Halalkalicoccus jeotgali B3]
Length = 106
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 72 SYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
SY ER + G +L R +L+ + + NCGG CGTC V +DG ++E
Sbjct: 5 SYEGERIECAVGTEL-REALLEAGLSPHNGASNYANCGGWAVCGTCAV-AVDGA--VSEM 60
Query: 132 TNTELRYLKKKPE----SWRLACQTIV 154
+ E + L K P RLACQT +
Sbjct: 61 SEAERKRLSKWPHDLDSGLRLACQTHI 87
>gi|313886029|ref|ZP_07819767.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924559|gb|EFR35330.1| NADH:ubiquinone oxidoreductase, F subunit [Porphyromonas
asaccharolytica PR426713P-I]
Length = 412
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE--SWRLACQTIVGNKENSGKVCS 165
CGG GSCG C +++G E TE + +K + WRL CQT V KE+ +
Sbjct: 69 CGGSGSCGQCRCRVVEGG---GEILATEKGFFSRKEQMAHWRLGCQTKV--KEDLKVIVP 123
Query: 166 RTMF 169
++F
Sbjct: 124 ESVF 127
>gi|113460432|ref|YP_718494.1| ferredoxin [Haemophilus somnus 129PT]
gi|170717851|ref|YP_001783512.1| 2Fe-2S type ferredoxin [Haemophilus somnus 2336]
gi|112822475|gb|ABI24564.1| ferredoxin [Haemophilus somnus 129PT]
gi|168825980|gb|ACA31351.1| ferredoxin, 2Fe-2S type, ISC system [Haemophilus somnus 2336]
Length = 113
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
A GE LL ++ + +E++ C G +C TC V I +G D LNE T E
Sbjct: 20 DAAPGENLL-DVAHNAGVEIHHA------CDGSCACTTCHVVIREGFDSLNETTEQEEDM 72
Query: 139 LKKKPESW------RLACQTIVGNKE 158
L K +W RL+CQ +VG ++
Sbjct: 73 LDK---AWGLEMDSRLSCQCVVGEED 95
>gi|15834949|ref|NP_296708.1| ferredoxin [Chlamydia muridarum Nigg]
gi|270285121|ref|ZP_06194515.1| ferredoxin [Chlamydia muridarum Nigg]
gi|270289142|ref|ZP_06195444.1| ferredoxin [Chlamydia muridarum Weiss]
gi|301336516|ref|ZP_07224718.1| ferredoxin [Chlamydia muridarum MopnTet14]
gi|7190371|gb|AAF39193.1| ferredoxin [Chlamydia muridarum Nigg]
Length = 91
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQTIV 154
G CGTC+VEI++G D L+E + E +L S RLACQ +
Sbjct: 39 GVCGTCVVEILEGTDNLSEFSEAEQDFLGDPDSSNERLACQCCI 82
>gi|448435984|ref|ZP_21587000.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
gi|445683144|gb|ELZ35547.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
Length = 130
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELRYLKKKPE 144
LR ++LD + YA + +NCGG G C TC V + +G D ++R Y
Sbjct: 42 LRRVLLDAGLSPYAPATRRLNCGGRGLCATCGVRVREGPPADHWHDRLADRFGYP----- 96
Query: 145 SWRLACQTIV 154
RL+CQ V
Sbjct: 97 --RLSCQIAV 104
>gi|70732284|ref|YP_262040.1| (2Fe-2S)-binding protein [Pseudomonas protegens Pf-5]
gi|68346583|gb|AAY94189.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas protegens Pf-5]
Length = 113
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 93 DNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------ 146
DN IE+ + CGG +C TC I +G D LNE E L K +W
Sbjct: 33 DNHIEIESA------CGGVCACTTCHCIIREGFDSLNEADELEEDLLDK---AWGLEAQS 83
Query: 147 RLACQTIVGNKE 158
RL+CQ IVG+++
Sbjct: 84 RLSCQAIVGDED 95
>gi|347754687|ref|YP_004862251.1| ferredoxin [Candidatus Chloracidobacterium thermophilum B]
gi|347587205|gb|AEP11735.1| Ferredoxin [Candidatus Chloracidobacterium thermophilum B]
Length = 157
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 106 MNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---RLACQT-IVGN 156
M CGG G C TC V +I G++ L RT E+R L + RL+CQ I+G+
Sbjct: 34 MACGGMGLCATCHVFVIKGEESLTPRTEREIRTLATITGATARSRLSCQARIIGD 88
>gi|448479063|ref|ZP_21603987.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum arcis JCM 13916]
gi|448512238|ref|ZP_21616352.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 9100]
gi|448520860|ref|ZP_21618193.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 10118]
gi|445694558|gb|ELZ46683.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 9100]
gi|445702996|gb|ELZ54935.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum distributum JCM 10118]
gi|445822697|gb|EMA72460.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum arcis JCM 13916]
Length = 135
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELRYLK---- 140
LR ++LD + YA + +NCGG G C TC V + +G D ++R Y +
Sbjct: 41 LRRVLLDAGLSPYAPATRRLNCGGRGLCATCGVRVREGPPADHWHDRLADRFGYPRLSCQ 100
Query: 141 ---KKPESWRLACQTIVGNKENSGK 162
+P + L + + G +++ G+
Sbjct: 101 ISVDRPMTVALVDKRVWGGRQSDGR 125
>gi|448664385|ref|ZP_21684188.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula amylolytica JCM 13557]
gi|445775030|gb|EMA26044.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloarcula amylolytica JCM 13557]
Length = 111
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++LD + + Y K +NCGG G C TC V + + D + + R+
Sbjct: 24 VLRDVLLDADLSPHGRYAKRVNCGGRGICATCGVRLAEPPDPDHWHDDLADRFGYP---- 79
Query: 146 WRLACQTIV 154
RL+CQ V
Sbjct: 80 -RLSCQLRV 87
>gi|323144177|ref|ZP_08078812.1| NADH:ubiquinone oxidoreductase, F subunit [Succinatimonas hippei
YIT 12066]
gi|322416018|gb|EFY06717.1| NADH:ubiquinone oxidoreductase, F subunit [Succinatimonas hippei
YIT 12066]
Length = 409
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEII-DGKDLLN-ERTNTELRYLKKKPESWRLACQTIVGN 156
CGG G+CG C V+++ G D+L E ++ R ++ E WRLACQ V N
Sbjct: 70 CGGRGACGQCKVKVVKGGGDVLPIEYSHFTKRQIR---EGWRLACQVTVKN 117
>gi|402698604|ref|ZP_10846583.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fragi A22]
Length = 113
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE 144
K + + DN IE+ + CGG +C TC I +G D LNE E YL +
Sbjct: 25 KTILEVAHDNHIEIESA------CGGVCACTTCHCVIREGFDSLNEADELEEDYLDR--- 75
Query: 145 SW------RLACQTIVGNKE 158
+W RL+CQ VG ++
Sbjct: 76 AWGLEATSRLSCQARVGTED 95
>gi|346993707|ref|ZP_08861779.1| adenylate/guanylate cyclase [Ruegeria sp. TW15]
Length = 551
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQ 151
CGG G C TC V + +G D L+ T E R LK P+ RLACQ
Sbjct: 279 CGGKGRCTTCRVVVEEGADQLHPPTEVEARSLKAVSAPKGTRLACQ 324
>gi|366163216|ref|ZP_09462971.1| ferredoxin [Acetivibrio cellulolyticus CD2]
Length = 88
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
C G G CG CIV++I GK ++E T E L KK + +RLAC+T V
Sbjct: 32 CNGKGKCGKCIVKVISGK--VSEPTKCEEDLLGKKNLGQGYRLACETTV 78
>gi|448448505|ref|ZP_21591236.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum litoreum JCM 13561]
gi|445814521|gb|EMA64482.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum litoreum JCM 13561]
Length = 135
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELRYLKKKPE 144
LR ++LD + YA + +NCGG G C TC V + +G D ++R Y
Sbjct: 41 LRRVLLDAGLSPYAPATRRLNCGGRGLCATCGVRVREGPPADHWHDRLADRFGYP----- 95
Query: 145 SWRLACQTIV 154
RL+CQ V
Sbjct: 96 --RLSCQISV 103
>gi|315633889|ref|ZP_07889178.1| ferredoxin [Aggregatibacter segnis ATCC 33393]
gi|315477139|gb|EFU67882.1| ferredoxin [Aggregatibacter segnis ATCC 33393]
Length = 113
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE ++ E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ I+G+++
Sbjct: 82 ESRLSCQCIIGDED 95
>gi|303288275|ref|XP_003063426.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455258|gb|EEH52562.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 234
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 12/91 (13%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLL--NERTNTELRYLKKKPE 144
LR +L + + V+NC G G+CGTC VE+ +D + T E L+ P
Sbjct: 91 LRTALLRAGLSPHNDAANVINCRGLGTCGTCAVEVTP-RDAASPSSWTTMEAARLRFPPH 149
Query: 145 S------WRLACQTIVGNKENSGKVCSRTMF 169
+ RLACQ V E+S V RT F
Sbjct: 150 ASPGNRRLRLACQVRV---ESSCAVVKRTKF 177
>gi|66044490|ref|YP_234331.1| ferredoxin, 2Fe-2S type [Pseudomonas syringae pv. syringae B728a]
gi|422671336|ref|ZP_16730702.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aceris str. M302273]
gi|63255197|gb|AAY36293.1| Ferredoxin, 2Fe-2S type [Pseudomonas syringae pv. syringae B728a]
gi|330969076|gb|EGH69142.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aceris str. M302273]
Length = 113
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
+ +I ++ IE+ + CGG +C TC I +G D LNE E L K +W
Sbjct: 27 ILDIAHEHHIEIESA------CGGVCACTTCHCVIREGFDSLNEADELEEDMLDK---AW 77
Query: 147 ------RLACQTIVGNKE 158
RL+CQ IVGN++
Sbjct: 78 GLERQSRLSCQAIVGNED 95
>gi|352100743|ref|ZP_08958299.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
HAL1]
gi|350600964|gb|EHA17020.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
HAL1]
Length = 410
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCI--VEIIDGKDLLNER 131
P K +G KLL N + N I L + CGGGGSC C VE G L E
Sbjct: 46 PEHTLKTQAGGKLL-NTLAANGIFLSSA------CGGGGSCAQCKCRVEEGGGSILPTEE 98
Query: 132 TNTELRYLKKKPESWRLACQTIV 154
++ +R +K E WRL+CQ V
Sbjct: 99 SHFTMR---EKKEGWRLSCQVPV 118
>gi|284118230|ref|ZP_06386763.1| ferredoxin [Candidatus Poribacteria sp. WGA-A3]
gi|283829466|gb|EFC33836.1| ferredoxin [Candidatus Poribacteria sp. WGA-A3]
Length = 115
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES---WRLACQTIV 154
+CGG SC TC VE+I G D L+E E L ++ + RL+CQ +V
Sbjct: 36 DCGGSASCSTCRVEVIAGGDHLSEIDFEEQDLLDREALTEPYHRLSCQAMV 86
>gi|448746709|ref|ZP_21728374.1| NADH-quinone reductase, Na(+)-translocating, F subunit [Halomonas
titanicae BH1]
gi|445565637|gb|ELY21746.1| NADH-quinone reductase, Na(+)-translocating, F subunit [Halomonas
titanicae BH1]
Length = 410
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCI--VEIIDGKDLLNER 131
P K +G KLL N + N I L + CGGGGSC C VE G L E
Sbjct: 46 PEHTLKTQAGGKLL-NTLAANGIFLSSA------CGGGGSCAQCKCRVEEGGGSILPTEE 98
Query: 132 TNTELRYLKKKPESWRLACQTIV 154
++ +R +K E WRL+CQ V
Sbjct: 99 SHFTMR---EKKEGWRLSCQVPV 118
>gi|304382725|ref|ZP_07365216.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
marshii DSM 16973]
gi|304336120|gb|EFM02365.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
marshii DSM 16973]
Length = 422
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQ 151
CGG GSCG C V +I+G E ++E + +K + WRL CQ
Sbjct: 69 CGGKGSCGQCKVRVIEGG---GEILDSERSHFTRKEVKDHWRLGCQ 111
>gi|189347075|ref|YP_001943604.1| ferredoxin [Chlorobium limicola DSM 245]
gi|189341222|gb|ACD90625.1| ferredoxin [Chlorobium limicola DSM 245]
Length = 360
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQ-TIVGNKENSGKVC 164
CGG G C C V +++G +LL+ ++ E +L ++ RLACQ TI G E + K
Sbjct: 33 CGGHGICQACYVTVLEGNELLSSLSDIEKAFLSPRQIQSGGRLACQATITG--EGTIKAL 90
Query: 165 SR 166
SR
Sbjct: 91 SR 92
>gi|189500627|ref|YP_001960097.1| ferredoxin [Chlorobium phaeobacteroides BS1]
gi|189496068|gb|ACE04616.1| ferredoxin [Chlorobium phaeobacteroides BS1]
Length = 226
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C +C V + +G D L+ E ++ K RLACQT + K+ + +V S
Sbjct: 33 CGGSGVCQSCFVYVKEGMDCLSAPNKVEKAFISDKLTEAGGRLACQTRI-IKDGAVRVLS 91
Query: 166 RTMFLLNLLAFLQ 178
R L ++ LQ
Sbjct: 92 RAEMLRRIVVGLQ 104
>gi|189346299|ref|YP_001942828.1| ferredoxin [Chlorobium limicola DSM 245]
gi|189340446|gb|ACD89849.1| ferredoxin [Chlorobium limicola DSM 245]
Length = 221
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKV 163
CGG G C TC V++I+G +LL+ + TE L + E R+AC T N E G V
Sbjct: 33 CGGNGICQTCYVKVIEGSELLSPISETEKAMLSDRLIEEGTRMACLT---NIEKPGTV 87
>gi|448731157|ref|ZP_21713460.1| hypothetical protein C449_15277 [Halococcus saccharolyticus DSM
5350]
gi|445792751|gb|EMA43352.1| hypothetical protein C449_15277 [Halococcus saccharolyticus DSM
5350]
Length = 118
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 84 EKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP 143
E LR+ +L + +NCGG +CGTC V I +++R L + P
Sbjct: 16 EANLRDALLVTGESPHNGASSTLNCGGHATCGTCAVAIDGPVSDMDDRERRRLSFPPHSP 75
Query: 144 ES-WRLACQTIV 154
+S RLAC+T V
Sbjct: 76 DSGLRLACRTRV 87
>gi|448424091|ref|ZP_21582217.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum terrestre JCM 10247]
gi|445682756|gb|ELZ35169.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Halorubrum terrestre JCM 10247]
Length = 135
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELRYLK---- 140
LR ++LD + YA + +NCGG G C TC V + +G D ++R Y +
Sbjct: 41 LRRVLLDAGLSPYAPATRRLNCGGRGLCATCGVRVREGPPADHWHDRLADRFGYPRLSCQ 100
Query: 141 ---KKPESWRLACQTIVGNKENSGK 162
+P + L + + G +++ G+
Sbjct: 101 ISVDRPMTVALVDKRVWGGRQSDGR 125
>gi|427713664|ref|YP_007062288.1| family 3 adenylate cyclase [Synechococcus sp. PCC 6312]
gi|427377793|gb|AFY61745.1| family 3 adenylate cyclase [Synechococcus sp. PCC 6312]
Length = 332
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 98 LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVG 155
L A CGG +C TC + ++DG + + EL KK P RLACQT
Sbjct: 26 LRANIDHTHVCGGHANCSTCRIMVLDGIEHCTLPSGPELALAKKLDFPFHIRLACQT--- 82
Query: 156 NKENSGKVCSRTMFL 170
K + GKV R M L
Sbjct: 83 -KVSQGKVEIRRMVL 96
>gi|33152212|ref|NP_873565.1| ferredoxin [Haemophilus ducreyi 35000HP]
gi|33148434|gb|AAP95954.1| ferredoxin [Haemophilus ducreyi 35000HP]
Length = 113
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +EL G ++ C +C TC V I +G D LNE ++ E L K +W
Sbjct: 25 DNLLELAHNAGVEIHHACDASCACTTCHVVIREGFDSLNETSDQEEDMLDK---AWGLEM 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ IVG ++
Sbjct: 82 DSRLSCQCIVGEED 95
>gi|134022758|gb|ABO45325.1| NqrF [Marinobacter hydrocarbonoclasticus]
Length = 408
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C +++DG + T ++K E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVLDGGGAMLPTEKTHFTNREEK-EGWRLSCQVPV 116
>gi|387813797|ref|YP_005429280.1| Na(+)-translocating NADH-quinone reductase subunit F
(Na(+)-translocating NADH-quinone reductase subunit
beta) (Na(+)-translocating NQR subunit F) (Na(+)-NQR
subunit F) (NQR complex subunit F) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338810|emb|CCG94857.1| Na(+)-translocating NADH-quinone reductase subunit F
(Na(+)-translocating NADH-quinone reductase subunit
beta) (Na(+)-translocating NQR subunit F) (Na(+)-NQR
subunit F) (NQR complex subunit F) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 408
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C +++DG + T ++K E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVLDGGGAMLPTEKTHFTNREEK-EGWRLSCQVPV 116
>gi|389685971|ref|ZP_10177294.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas chlororaphis O6]
gi|399009187|ref|ZP_10711629.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas sp. GM17]
gi|388550313|gb|EIM13583.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas chlororaphis O6]
gi|398113464|gb|EJM03311.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas sp. GM17]
Length = 113
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A G +L + DN IE+ + CGG +C TC I +G D LNE E
Sbjct: 20 EAAPGTSILE-VAHDNHIEIESA------CGGVCACTTCHCIIREGFDSLNEADELEEDL 72
Query: 139 LKKKPESW------RLACQTIVGNKE 158
L K +W RL+CQ IVG ++
Sbjct: 73 LDK---AWGLEAQSRLSCQAIVGEED 95
>gi|348590016|ref|YP_004874478.1| ferredoxin, 2Fe-2S [Taylorella asinigenitalis MCE3]
gi|347973920|gb|AEP36455.1| Ferredoxin, 2Fe-2S [Taylorella asinigenitalis MCE3]
gi|399116853|emb|CCG19664.1| ferredoxin [Taylorella asinigenitalis 14/45]
Length = 111
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 113 SCGTCIVEIIDGKDLLNERTNTELRYLKK----KPESWRLACQTIVGNKE 158
+C TC V +++G D LNE T+ E L K KP S RL+CQ +VG+++
Sbjct: 48 ACTTCHVYVVEGFDNLNESTDDEEDMLDKAWGLKPNS-RLSCQVVVGDED 96
>gi|86142970|ref|ZP_01061392.1| adenylate/guanylate cyclase [Leeuwenhoekiella blandensis MED217]
gi|85830415|gb|EAQ48874.1| adenylate/guanylate cyclase [Leeuwenhoekiella blandensis MED217]
Length = 313
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTE--LRYLKKKPESWRLACQTIV 154
CGG C TC + I+ G++ L+E E LR + P++ RLACQT V
Sbjct: 39 CGGKARCSTCRILIVKGEENLSEINAAEAKLRTYFELPKNVRLACQTYV 87
>gi|225175253|ref|ZP_03729249.1| ferredoxin [Dethiobacter alkaliphilus AHT 1]
gi|225169429|gb|EEG78227.1| ferredoxin [Dethiobacter alkaliphilus AHT 1]
Length = 634
Score = 39.7 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV-GN 156
NCGG G+CG C+V++ DG L +T K K LACQT+V GN
Sbjct: 37 NCGGDGTCGRCLVKVKDGNVRLK---STGAVSQKAKQAGMVLACQTMVEGN 84
>gi|120554843|ref|YP_959194.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
aquaeolei VT8]
gi|120324692|gb|ABM19007.1| NADH:ubiquinone oxidoreductase, subunit F [Marinobacter aquaeolei
VT8]
Length = 408
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C +++DG + T ++K E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVLDGGGAMLPTEKTHFTNREEK-EGWRLSCQVPV 116
>gi|448734440|ref|ZP_21716666.1| ferredoxin I 5 [Halococcus salifodinae DSM 8989]
gi|445800488|gb|EMA50843.1| ferredoxin I 5 [Halococcus salifodinae DSM 8989]
Length = 112
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
LR+ +L++ +Y T + NCGG G C TC VEI
Sbjct: 25 LRDALLEHGFPVYGTLSQYANCGGRGLCATCTVEI 59
>gi|94499519|ref|ZP_01306056.1| Na(+)-translocating NADH-quinone reductase subunit F [Bermanella
marisrubri]
gi|94428273|gb|EAT13246.1| Na(+)-translocating NADH-quinone reductase subunit F [Oceanobacter
sp. RED65]
Length = 411
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133
P + K +G KLL N + +N + L + CGGGG+C C +I +G +
Sbjct: 46 PEKTIKTQAGGKLL-NTLANNGVFLSSA------CGGGGTCAQCSCQIFEGGGSM---LP 95
Query: 134 TELRYLKKKP--ESWRLACQTIV 154
TE + K+ E WRL+CQ V
Sbjct: 96 TEESHFTKRDAREGWRLSCQVPV 118
>gi|443477087|ref|ZP_21066958.1| ferredoxin [Pseudanabaena biceps PCC 7429]
gi|443017858|gb|ELS32214.1| ferredoxin [Pseudanabaena biceps PCC 7429]
Length = 168
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133
P+ + ++ E L +++L ++ + CGG G C TC V + DG D L+ ++
Sbjct: 8 PLNQDVEVATESTLLSVLLKQEMNVLQA------CGGQGRCATCHVYVRDGGDALSPKSE 61
Query: 134 TE---LRYLKKKPESWRLACQTIV 154
E L ++ + RLACQ V
Sbjct: 62 QEIMTLSFITSSKANSRLACQARV 85
>gi|403049441|ref|ZP_10903925.1| Na(+)-translocating NADH-quinone reductase subunit F, partial
[SAR86 cluster bacterium SAR86D]
Length = 402
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKD--LLNERTNTELRYL 139
+G KLL+ + +NKI L + CGGGG+C C ++DG L E ++ R
Sbjct: 52 AGSKLLQT-LAENKIFLSSA------CGGGGTCSQCKCVVLDGGGSILPTEESHFNSR-- 102
Query: 140 KKKPESWRLACQTIV 154
++ E WRL+CQ V
Sbjct: 103 -ERNEGWRLSCQVPV 116
>gi|226943582|ref|YP_002798655.1| Na(+)-translocating NADH-quinone reductase subunit F [Azotobacter
vinelandii DJ]
gi|226718509|gb|ACO77680.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating protein,
subunit F [Azotobacter vinelandii DJ]
Length = 407
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + +N A CGGGG+C C+VE G+ L E ++ R
Sbjct: 50 AGGKLLQTLAANNIFLSSA-------CGGGGTCAQCKCVVESGGGEMLPTEESHFTRRQA 102
Query: 140 KKKPESWRLACQTIV 154
K E WRL+CQT V
Sbjct: 103 K---EGWRLSCQTPV 114
>gi|424841237|ref|ZP_18265862.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Saprospira grandis DSM 2844]
gi|395319435|gb|EJF52356.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Saprospira grandis DSM 2844]
Length = 442
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGGGG+C C ++ + G D+L TEL ++ +K ++WRLACQ V
Sbjct: 71 CGGGGTCAMCRCQVDNGGGDIL----PTELNHISRKDAQDNWRLACQVKV 116
>gi|379731166|ref|YP_005323362.1| Na(+)-translocating NADH-quinone reductase subunit F [Saprospira
grandis str. Lewin]
gi|378576777|gb|AFC25778.1| Na(+)-translocating NADH-quinone reductase subunit F [Saprospira
grandis str. Lewin]
Length = 442
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGGGG+C C ++ + G D+L TEL ++ +K ++WRLACQ V
Sbjct: 71 CGGGGTCAMCRCQVDNGGGDIL----PTELNHISRKDAQDNWRLACQVKV 116
>gi|189500314|ref|YP_001959784.1| ferredoxin [Chlorobium phaeobacteroides BS1]
gi|189495755|gb|ACE04303.1| ferredoxin [Chlorobium phaeobacteroides BS1]
Length = 355
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 83 GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK 142
GEKL + I L++K + G V C G G C TC V +++G + L+ ++ E +L +K
Sbjct: 15 GEKLSK-IALESK----SHVGYV--CAGLGICQTCYVTVLEGGERLSPLSDVERAFLSEK 67
Query: 143 --PESWRLACQTIVGNKENSGKVCSR 166
+ RLACQT V +E +V SR
Sbjct: 68 QIAQGARLACQTTV-IQEGMIRVLSR 92
>gi|416892751|ref|ZP_11924075.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter aphrophilus
ATCC 33389]
gi|347814449|gb|EGY31098.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter aphrophilus
ATCC 33389]
Length = 113
Score = 39.7 bits (91), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE + E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPCDQEEDMLDK---AWGLEI 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ IVG+++
Sbjct: 82 DSRLSCQCIVGDED 95
>gi|29840189|ref|NP_829295.1| ferredoxin [Chlamydophila caviae GPIC]
gi|29834537|gb|AAP05173.1| ferredoxin [Chlamydophila caviae GPIC]
Length = 91
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQ 151
G CGTC++E+++GK+ L++ T+ E +L + +S RLACQ
Sbjct: 39 GVCGTCVIEVLEGKENLSDFTDEEKDFLGEPEDSNERLACQ 79
>gi|404486531|ref|ZP_11021721.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Barnesiella intestinihominis YIT 11860]
gi|404336349|gb|EJZ62810.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Barnesiella intestinihominis YIT 11860]
Length = 422
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE--SWRLACQTIVGN 156
CGGGGSC C ++++G E TE + +K + WRL CQ V N
Sbjct: 69 CGGGGSCAQCRCQVLEGG---GEILPTEQVHFSRKQQLNHWRLGCQVKVKN 116
>gi|166154280|ref|YP_001654398.1| ferredoxin [Chlamydia trachomatis 434/Bu]
gi|166155155|ref|YP_001653410.1| ferredoxin [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|301335531|ref|ZP_07223775.1| ferredoxin [Chlamydia trachomatis L2tet1]
gi|339625710|ref|YP_004717189.1| ferredoxin-4 [Chlamydia trachomatis L2c]
gi|165930268|emb|CAP03754.1| ferredoxin [Chlamydia trachomatis 434/Bu]
gi|165931143|emb|CAP06708.1| ferredoxin [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|339460678|gb|AEJ77181.1| ferredoxin-4 [Chlamydia trachomatis L2c]
gi|407651594|gb|AFU24094.1| ferredoxin [Chlamydia trachomatis]
gi|407651597|gb|AFU24096.1| ferredoxin [Chlamydia trachomatis]
gi|408777321|gb|AFU90691.1| ferredoxin [Chlamydia trachomatis]
gi|440525866|emb|CCP51350.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/8200/07]
gi|440535690|emb|CCP61203.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/795]
gi|440536580|emb|CCP62094.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/440/LN]
gi|440537472|emb|CCP62986.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/1322/p2]
gi|440538362|emb|CCP63876.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/115]
gi|440539251|emb|CCP64765.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L1/224]
gi|440540141|emb|CCP65655.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2/25667R]
gi|440541031|emb|CCP66545.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L3/404/LN]
gi|440541919|emb|CCP67433.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/UCH-2]
gi|440542809|emb|CCP68323.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Canada2]
gi|440543701|emb|CCP69215.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/LST]
gi|440544591|emb|CCP70105.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams1]
gi|440545481|emb|CCP70995.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/CV204]
gi|440913743|emb|CCP90160.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams2]
gi|440914633|emb|CCP91050.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams3]
gi|440915523|emb|CCP91940.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Canada1]
gi|440916418|emb|CCP92835.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams4]
gi|440917308|emb|CCP93725.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis L2b/Ams5]
Length = 91
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQTIV 154
G CGTC++E+++G D L++ + E +L +S RLACQ +
Sbjct: 39 GVCGTCVIEVLEGADNLSDFSEAEYDFLGDPEDSNERLACQCCI 82
>gi|333901086|ref|YP_004474959.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
fulva 12-X]
gi|333116351|gb|AEF22865.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
fulva 12-X]
Length = 407
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + +N I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-ENDIFLSSA------CGGGGTCAQCKCIVESGGGEMLSTEESHFNKREA 102
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 103 R---EGWRLSCQTPV 114
>gi|386021368|ref|YP_005939392.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 4166]
gi|327481340|gb|AEA84650.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 4166]
Length = 407
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + +N A CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLAANNIFLSSA-------CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAAEGWRLSCQTPV 114
>gi|284038149|ref|YP_003388079.1| ferredoxin [Spirosoma linguale DSM 74]
gi|283817442|gb|ADB39280.1| ferredoxin [Spirosoma linguale DSM 74]
Length = 107
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 100 ATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES---WRLACQTIVGN 156
+ Y + CGG C TC V++++G D L + EL L P++ RLACQ V N
Sbjct: 33 SDYKILATCGGMALCATCHVQVLNGFDDLPAAQDAELDMLDTLPDADFDSRLACQIRV-N 91
Query: 157 KENSGKV 163
+ G V
Sbjct: 92 EAIEGAV 98
>gi|189466193|ref|ZP_03014978.1| hypothetical protein BACINT_02563 [Bacteroides intestinalis DSM
17393]
gi|189434457|gb|EDV03442.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides intestinalis
DSM 17393]
Length = 424
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C +++DG E +E+ + +K + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLDGG---GEILPSEVPHFSRKQVQDHWRLGCQVKV 115
>gi|189346298|ref|YP_001942827.1| ferredoxin [Chlorobium limicola DSM 245]
gi|189340445|gb|ACD89848.1| ferredoxin [Chlorobium limicola DSM 245]
Length = 226
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C +C V + +G L+ + E ++ +K E RLACQT++ E + KV S
Sbjct: 33 CGGNGICQSCFVYVKEGAGSLSRPSEEEKAFISEKLFQEGGRLACQTVI-TGEGTIKVLS 91
Query: 166 RT------MFLLNLLAFLQKEMRVTSLNHSKLPS 193
R + LN+ F+ + +KLP
Sbjct: 92 RAENLRRIVIGLNVPGFITYAQTIGYNVLNKLPG 125
>gi|443472674|ref|ZP_21062700.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
pseudoalcaligenes KF707]
gi|442903116|gb|ELS28529.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
pseudoalcaligenes KF707]
Length = 408
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + N A CGGGG+C C+VE G+ L E ++ R
Sbjct: 51 AGGKLLQTLAAQNIFLSSA-------CGGGGTCAQCKCVVESGGGEMLPTEESHFTRRQA 103
Query: 140 KKKPESWRLACQTIV 154
K E WRL+CQT V
Sbjct: 104 K---EGWRLSCQTPV 115
>gi|423224897|ref|ZP_17211365.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides cellulosilyticus CL02T12C19]
gi|392634193|gb|EIY28119.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides cellulosilyticus CL02T12C19]
Length = 424
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C +++DG E +E+ + +K + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLDGG---GEILPSEVPHFSRKQVQDHWRLGCQVKV 115
>gi|330807641|ref|YP_004352103.1| adrenodoxin family ferredoxin [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|378948953|ref|YP_005206441.1| ferredoxin, 2Fe-2S [Pseudomonas fluorescens F113]
gi|423695449|ref|ZP_17669939.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens
Q8r1-96]
gi|327375749|gb|AEA67099.1| adrenodoxin family ferredoxin(2Fe-2S iron-sulfur cluster binding
domain) [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|359758967|gb|AEV61046.1| Ferredoxin, 2Fe-2S [Pseudomonas fluorescens F113]
gi|388009295|gb|EIK70546.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas fluorescens
Q8r1-96]
Length = 113
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A +G+ +L + DN IE+ + CGG +C TC I +G D LNE E Y
Sbjct: 20 EAETGKSILE-VAHDNHIEIESA------CGGVCACTTCHCIIREGFDSLNEADELEEDY 72
Query: 139 LKK----KPESWRLACQTIVGNKE 158
L + +P S RL CQ VG ++
Sbjct: 73 LDRAWGLEPTS-RLTCQAKVGTED 95
>gi|374995790|ref|YP_004971289.1| metal-binding protein [Desulfosporosinus orientis DSM 765]
gi|357214156|gb|AET68774.1| putative metal-binding protein [Desulfosporosinus orientis DSM 765]
Length = 644
Score = 39.3 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG G+CG C V ++ G +++ N L K +RLAC+T+V
Sbjct: 46 CGGKGTCGACKVVVLSGDPIIDGTGNLTSEQLSK---GYRLACKTLV 89
>gi|198274583|ref|ZP_03207115.1| hypothetical protein BACPLE_00735 [Bacteroides plebeius DSM 17135]
gi|198272030|gb|EDY96299.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides plebeius DSM
17135]
Length = 422
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVVEGG---GEILPSEVSHFSRKQQKDHWRLGCQVKV 115
>gi|260912954|ref|ZP_05919439.1| ferredoxin [Pasteurella dagmatis ATCC 43325]
gi|260632944|gb|EEX51110.1| ferredoxin [Pasteurella dagmatis ATCC 43325]
Length = 111
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 16/82 (19%)
Query: 83 GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK 142
GE LL + LD I++ C +C TC V I +G D LNE T+TE L K
Sbjct: 24 GENLL-DAALDAGIDIEHA------CDKSCACTTCHVIIREGFDSLNESTDTEDDMLDK- 75
Query: 143 PESW------RLACQTIVGNKE 158
+W RL+CQ IVG ++
Sbjct: 76 --AWGLEVDSRLSCQCIVGKED 95
>gi|229496272|ref|ZP_04389992.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, f subunit
[Porphyromonas endodontalis ATCC 35406]
gi|229316850|gb|EEN82763.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, f subunit
[Porphyromonas endodontalis ATCC 35406]
Length = 425
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE-- 144
L N + +N I L + CGG GSCG C +++G E TE + +K +
Sbjct: 57 LLNTLQNNGIYLSSA------CGGSGSCGQCRCRVVEGG---GEILPTEKGFFSRKEQKA 107
Query: 145 SWRLACQTIVGNKENSGKVCSRTMF 169
WRL CQT V KE+ + ++F
Sbjct: 108 HWRLGCQTKV--KEDLKIIVPESVF 130
>gi|448392752|ref|ZP_21567382.1| ferredoxin [Haloterrigena salina JCM 13891]
gi|445664071|gb|ELZ16791.1| ferredoxin [Haloterrigena salina JCM 13891]
Length = 123
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE 144
++LR+++L+ + +NC G G+CGTC V I + +E T E R L P
Sbjct: 17 RILRDVLLEADESPHNGGANWLNCRGHGTCGTCAVAI---EGDASEPTAAERRRLAIPPH 73
Query: 145 S----WRLACQTIV 154
RL+CQT V
Sbjct: 74 DPDAGLRLSCQTRV 87
>gi|224539394|ref|ZP_03679933.1| hypothetical protein BACCELL_04299 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518968|gb|EEF88073.1| hypothetical protein BACCELL_04299 [Bacteroides cellulosilyticus
DSM 14838]
Length = 424
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C +++DG E +E+ + +K + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLDGG---GEILPSEVPHFSRKQVQDHWRLGCQVKV 115
>gi|62185042|ref|YP_219827.1| ferredoxin [Chlamydophila abortus S26/3]
gi|424825096|ref|ZP_18250083.1| ferredoxin, root r-b2 [Chlamydophila abortus LLG]
gi|62148109|emb|CAH63866.1| ferredoxin, root r-b2 [Chlamydophila abortus S26/3]
gi|333410195|gb|EGK69182.1| ferredoxin, root r-b2 [Chlamydophila abortus LLG]
Length = 91
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQ 151
G CGTC++E+++GK+ L+ T E +L + +S RLACQ
Sbjct: 39 GVCGTCVIEVVEGKENLSSFTEEEKDFLGESEDSNERLACQ 79
>gi|427383185|ref|ZP_18879905.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides oleiciplenus YIT 12058]
gi|425729099|gb|EKU91952.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides oleiciplenus YIT 12058]
Length = 424
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C +++DG E +E+ + +K + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLDGG---GEILPSEVPHFSRKQVQDHWRLGCQVKV 115
>gi|15604778|ref|NP_219562.1| ferredoxin [Chlamydia trachomatis D/UW-3/CX]
gi|76788772|ref|YP_327858.1| ferredoxin [Chlamydia trachomatis A/HAR-13]
gi|237802493|ref|YP_002887687.1| ferredoxin [Chlamydia trachomatis B/Jali20/OT]
gi|237804408|ref|YP_002888562.1| ferredoxin [Chlamydia trachomatis B/TZ1A828/OT]
gi|255310861|ref|ZP_05353431.1| ferredoxin [Chlamydia trachomatis 6276]
gi|255317161|ref|ZP_05358407.1| ferredoxin [Chlamydia trachomatis 6276s]
gi|255348422|ref|ZP_05380429.1| ferredoxin [Chlamydia trachomatis 70]
gi|255502964|ref|ZP_05381354.1| ferredoxin [Chlamydia trachomatis 70s]
gi|255506633|ref|ZP_05382272.1| ferredoxin [Chlamydia trachomatis D(s)2923]
gi|376282068|ref|YP_005155894.1| ferredoxin [Chlamydia trachomatis A2497]
gi|385239571|ref|YP_005807413.1| ferredoxin [Chlamydia trachomatis G/9768]
gi|385240492|ref|YP_005808333.1| ferredoxin [Chlamydia trachomatis G/11222]
gi|385241420|ref|YP_005809260.1| ferredoxin [Chlamydia trachomatis E/11023]
gi|385242347|ref|YP_005810186.1| ferredoxin [Chlamydia trachomatis G/9301]
gi|385243266|ref|YP_005811112.1| Ferredoxin [Chlamydia trachomatis D-EC]
gi|385244146|ref|YP_005811990.1| Ferredoxin [Chlamydia trachomatis D-LC]
gi|385245030|ref|YP_005813853.1| ferredoxin [Chlamydia trachomatis E/150]
gi|385245957|ref|YP_005814779.1| ferredoxin [Chlamydia trachomatis G/11074]
gi|385269709|ref|YP_005812869.1| Ferredoxin [Chlamydia trachomatis A2497]
gi|386262416|ref|YP_005815695.1| ferredoxin [Chlamydia trachomatis Sweden2]
gi|389857757|ref|YP_006359999.1| ferredoxin [Chlamydia trachomatis F/SW4]
gi|389858630|ref|YP_006360871.1| ferredoxin [Chlamydia trachomatis E/SW3]
gi|389859508|ref|YP_006361748.1| ferredoxin [Chlamydia trachomatis F/SW5]
gi|3328452|gb|AAC67650.1| Ferredoxin [Chlamydia trachomatis D/UW-3/CX]
gi|76167302|gb|AAX50310.1| ferredoxin [Chlamydia trachomatis A/HAR-13]
gi|231272708|emb|CAX09612.1| ferredoxin [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273727|emb|CAX10506.1| ferredoxin [Chlamydia trachomatis B/Jali20/OT]
gi|289525104|emb|CBJ14575.1| ferredoxin [Chlamydia trachomatis Sweden2]
gi|296434646|gb|ADH16824.1| ferredoxin [Chlamydia trachomatis E/150]
gi|296435576|gb|ADH17750.1| ferredoxin [Chlamydia trachomatis G/9768]
gi|296436500|gb|ADH18670.1| ferredoxin [Chlamydia trachomatis G/11222]
gi|296437436|gb|ADH19597.1| ferredoxin [Chlamydia trachomatis G/11074]
gi|296438363|gb|ADH20516.1| ferredoxin [Chlamydia trachomatis E/11023]
gi|297139935|gb|ADH96693.1| ferredoxin [Chlamydia trachomatis G/9301]
gi|297748189|gb|ADI50735.1| Ferredoxin [Chlamydia trachomatis D-EC]
gi|297749069|gb|ADI51747.1| Ferredoxin [Chlamydia trachomatis D-LC]
gi|347974849|gb|AEP34870.1| Ferredoxin [Chlamydia trachomatis A2497]
gi|371908098|emb|CAX08718.1| ferredoxin [Chlamydia trachomatis A2497]
gi|380248828|emb|CCE14113.1| ferredoxin [Chlamydia trachomatis F/SW5]
gi|380249704|emb|CCE13224.1| ferredoxin [Chlamydia trachomatis F/SW4]
gi|380250579|emb|CCE12335.1| ferredoxin [Chlamydia trachomatis E/SW3]
gi|407651567|gb|AFU24076.1| ferredoxin [Chlamydia trachomatis]
gi|407651570|gb|AFU24078.1| ferredoxin [Chlamydia trachomatis]
gi|407651573|gb|AFU24080.1| ferredoxin [Chlamydia trachomatis]
gi|407651576|gb|AFU24082.1| ferredoxin [Chlamydia trachomatis]
gi|407651579|gb|AFU24084.1| ferredoxin [Chlamydia trachomatis]
gi|407651582|gb|AFU24086.1| ferredoxin [Chlamydia trachomatis]
gi|407651585|gb|AFU24088.1| ferredoxin [Chlamydia trachomatis]
gi|407651588|gb|AFU24090.1| ferredoxin [Chlamydia trachomatis]
gi|407651591|gb|AFU24092.1| ferredoxin [Chlamydia trachomatis]
gi|408777325|gb|AFU90694.1| ferredoxin [Chlamydia trachomatis]
gi|408777329|gb|AFU90697.1| ferredoxin [Chlamydia trachomatis]
gi|408777333|gb|AFU90700.1| ferredoxin [Chlamydia trachomatis]
gi|438689978|emb|CCP49235.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis A/7249]
gi|438691062|emb|CCP48336.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis A/5291]
gi|438692434|emb|CCP47436.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis A/363]
gi|440524974|emb|CCP50225.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis K/SotonK1]
gi|440526757|emb|CCP52241.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis D/SotonD1]
gi|440527650|emb|CCP53134.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis D/SotonD5]
gi|440528541|emb|CCP54025.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis D/SotonD6]
gi|440529433|emb|CCP54917.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis E/SotonE4]
gi|440530326|emb|CCP55810.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis E/SotonE8]
gi|440531223|emb|CCP56733.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis F/SotonF3]
gi|440532114|emb|CCP57624.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis G/SotonG1]
gi|440533006|emb|CCP58516.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis Ia/SotonIa1]
gi|440533900|emb|CCP59410.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis Ia/SotonIa3]
gi|440534795|emb|CCP60305.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
trachomatis E/Bour]
Length = 91
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQTIV 154
G CGTC++E+++G D L++ + E +L +S RLACQ +
Sbjct: 39 GVCGTCVIEVLEGADNLSDFSEAEYDFLGDPEDSNERLACQCCI 82
>gi|255034221|ref|YP_003084842.1| ferredoxin [Dyadobacter fermentans DSM 18053]
gi|254946977|gb|ACT91677.1| ferredoxin [Dyadobacter fermentans DSM 18053]
Length = 107
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 94 NKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES---WRL 148
N +EL Y + CGG C TC +E+++GK+ L E + EL L P + RL
Sbjct: 25 NLMELLKAYEYDIQATCGGMALCATCHIEVLEGKENLPESNDQELDTLDTLPNADANSRL 84
Query: 149 ACQ 151
+CQ
Sbjct: 85 SCQ 87
>gi|189462709|ref|ZP_03011494.1| hypothetical protein BACCOP_03406 [Bacteroides coprocola DSM 17136]
gi|189430578|gb|EDU99562.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides coprocola
DSM 17136]
Length = 422
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVVEGG---GEILPSEVSHFSRKQQKDHWRLGCQVKV 115
>gi|15618279|ref|NP_224564.1| ferredoxin IV [Chlamydophila pneumoniae CWL029]
gi|15835897|ref|NP_300421.1| ferredoxin IV [Chlamydophila pneumoniae J138]
gi|16752675|ref|NP_444942.1| ferredoxin [Chlamydophila pneumoniae AR39]
gi|33241707|ref|NP_876648.1| ferredoxin IV [Chlamydophila pneumoniae TW-183]
gi|384449377|ref|YP_005661979.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydophila pneumoniae LPCoLN]
gi|4376640|gb|AAD18508.1| Ferredoxin IV [Chlamydophila pneumoniae CWL029]
gi|7189318|gb|AAF38239.1| ferredoxin [Chlamydophila pneumoniae AR39]
gi|8978736|dbj|BAA98572.1| ferredoxin IV [Chlamydophila pneumoniae J138]
gi|33236216|gb|AAP98305.1| ferredoxin IV [Chlamydophila pneumoniae TW-183]
gi|269303239|gb|ACZ33339.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydophila
pneumoniae LPCoLN]
Length = 91
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQ 151
G CGTC++E+++G++ L+E T E +L + +S RLACQ
Sbjct: 39 GVCGTCVIEVLEGRENLSEFTEPEYDFLGEPEDSNERLACQ 79
>gi|393760655|ref|ZP_10349462.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 2
[Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393161153|gb|EJC61220.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 2
[Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 92
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 110 GGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
GGG CGTC I +G D +E E ++L ++ E +R+ACQT V
Sbjct: 38 GGGICGTCKCRITEGLDNTDEVKAKEHKHLSEQDLAEGFRMACQTFV 84
>gi|322369289|ref|ZP_08043854.1| ferredoxin [Haladaptatus paucihalophilus DX253]
gi|320551021|gb|EFW92670.1| ferredoxin [Haladaptatus paucihalophilus DX253]
Length = 106
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE- 144
+LRN++L + +NC G CGTC VE+ + ++E+ ++E L K P
Sbjct: 18 VLRNVLLAADETPHNGSAHYLNCRGNAVCGTCAVEV---EGDVSEQKSSERNRLSKPPHD 74
Query: 145 ---SWRLACQTIV 154
RLACQT V
Sbjct: 75 PESGLRLACQTRV 87
>gi|116050997|ref|YP_790178.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa UCBPP-PA14]
gi|296388511|ref|ZP_06877986.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAb1]
gi|313108284|ref|ZP_07794316.1| Na+-translocating NADH:quinone oxidoreductase, subunit 6
[Pseudomonas aeruginosa 39016]
gi|355641271|ref|ZP_09052156.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas sp. 2_1_26]
gi|386067026|ref|YP_005982330.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa NCGM2.S1]
gi|421166858|ref|ZP_15625079.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 700888]
gi|421173808|ref|ZP_15631545.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CI27]
gi|122260126|sp|Q02PF8.1|NQRF_PSEAB RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|115586218|gb|ABJ12233.1| Na+-translocating NADH:quinone oxidoreductase, subunit 6
[Pseudomonas aeruginosa UCBPP-PA14]
gi|310880818|gb|EFQ39412.1| Na+-translocating NADH:quinone oxidoreductase, subunit 6
[Pseudomonas aeruginosa 39016]
gi|348035585|dbj|BAK90945.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa NCGM2.S1]
gi|354830869|gb|EHF14901.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas sp. 2_1_26]
gi|404535332|gb|EKA45033.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CI27]
gi|404536556|gb|EKA46193.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 700888]
Length = 407
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C +++G E TE + +
Sbjct: 51 AGGKLLQTLATNNVFLSSA-------CGGGGTCAQCKCVVVEGG---GEMLPTEESHFTR 100
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 RQAKEGWRLSCQTPV 115
>gi|452207992|ref|YP_007488114.1| ferredoxin (2Fe-2S) [Natronomonas moolapensis 8.8.11]
gi|452084092|emb|CCQ37425.1| ferredoxin (2Fe-2S) [Natronomonas moolapensis 8.8.11]
Length = 112
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
+LR+++ + + +Y + +V NCGG G CGTC V +
Sbjct: 25 ILRDVLRSHGVAVYGSVSRVANCGGRGLCGTCGVRV 60
>gi|416862520|ref|ZP_11915022.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 138244]
gi|334835951|gb|EGM14792.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 138244]
gi|453043727|gb|EME91455.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PA21_ST175]
Length = 407
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C +++G E TE + +
Sbjct: 51 AGGKLLQTLAANNVFLSSA-------CGGGGTCAQCKCVVVEGG---GEMLPTEESHFTR 100
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 RQAKEGWRLSCQTPV 115
>gi|15598190|ref|NP_251684.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAO1]
gi|107102544|ref|ZP_01366462.1| hypothetical protein PaerPA_01003608 [Pseudomonas aeruginosa PACS2]
gi|254235968|ref|ZP_04929291.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa C3719]
gi|254241699|ref|ZP_04935021.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa 2192]
gi|386058032|ref|YP_005974554.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa M18]
gi|392983278|ref|YP_006481865.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa DK2]
gi|418586438|ref|ZP_13150480.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P1]
gi|418590993|ref|ZP_13154897.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P2]
gi|419756465|ref|ZP_14282815.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PADK2_CF510]
gi|420139180|ref|ZP_14647037.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CIG1]
gi|421159695|ref|ZP_15618808.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 25324]
gi|421517524|ref|ZP_15964198.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAO579]
gi|424942363|ref|ZP_18358126.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa NCMG1179]
gi|451985367|ref|ZP_21933589.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 18A]
gi|15214157|sp|Q9HZL1.1|NQRF_PSEAE RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|9949094|gb|AAG06382.1|AE004724_11 Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa PAO1]
gi|126167899|gb|EAZ53410.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa C3719]
gi|126195077|gb|EAZ59140.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa 2192]
gi|346058809|dbj|GAA18692.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa NCMG1179]
gi|347304338|gb|AEO74452.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa M18]
gi|375043181|gb|EHS35812.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P1]
gi|375050234|gb|EHS42717.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa MPAO1/P2]
gi|384397196|gb|EIE43609.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PADK2_CF510]
gi|392318783|gb|AFM64163.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa DK2]
gi|403248050|gb|EJY61649.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa CIG1]
gi|404347006|gb|EJZ73355.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa PAO579]
gi|404546452|gb|EKA55505.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 25324]
gi|451756984|emb|CCQ86112.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 18A]
Length = 407
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C +++G E TE + +
Sbjct: 51 AGGKLLQTLAANNVFLSSA-------CGGGGTCAQCKCVVVEGG---GEMLPTEESHFTR 100
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 RQAKEGWRLSCQTPV 115
>gi|421153564|ref|ZP_15613105.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 14886]
gi|404523406|gb|EKA33829.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa ATCC 14886]
Length = 407
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C +++G E TE + +
Sbjct: 51 AGGKLLQTLAANNVFLSSA-------CGGGGTCAQCKCVVVEGG---GEMLPTEESHFTR 100
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 RQAKEGWRLSCQTPV 115
>gi|398393204|ref|XP_003850061.1| hypothetical protein MYCGRDRAFT_74842 [Zymoseptoria tritici IPO323]
gi|339469939|gb|EGP85037.1| hypothetical protein MYCGRDRAFT_74842 [Zymoseptoria tritici IPO323]
Length = 216
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 23 RSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAIS 82
R S +S SSP R + + + P+P + E ++ FI + G + ++ V
Sbjct: 64 RCSHRSYTSSPHRTFHTTSVRQHGDLTPPKPGE-ERKVTFI-DKDGQESTFEV-----AD 116
Query: 83 GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTC--IVEIIDGKDLLNERTNTELRYLK 140
G+ LL +I N +E+ CGG +C TC IV+ D D + E ++ E L
Sbjct: 117 GDNLL-DIAQANDLEMEGA------CGGSCACSTCHVIVKDEDIYDKMEEPSDDENDMLD 169
Query: 141 KK---PESWRLACQTIVGNKENSGKVCSRTMFLLNLLA--FLQKEMR 182
E+ RL CQ +V +KE G V NL A F +KE +
Sbjct: 170 LAFGLTETSRLGCQ-VVMSKEIDGLVVKLPSMTRNLQASDFAEKEKK 215
>gi|218890807|ref|YP_002439671.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa LESB58]
gi|421179845|ref|ZP_15637419.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa E2]
gi|218771030|emb|CAW26795.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas aeruginosa LESB58]
gi|404546423|gb|EKA55477.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa E2]
Length = 407
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C +++G E TE + +
Sbjct: 51 AGGKLLQTLAANNVFLSSA-------CGGGGTCAQCKCVVVEGG---GEMLPTEESHFTR 100
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 RQAKEGWRLSCQTPV 115
>gi|219848207|ref|YP_002462640.1| ferredoxin [Chloroflexus aggregans DSM 9485]
gi|219542466|gb|ACL24204.1| ferredoxin [Chloroflexus aggregans DSM 9485]
Length = 205
Score = 39.3 bits (90), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
C G G C TC V+++ G + LN T E ++ ++ E WRL CQ V
Sbjct: 34 CNGTGFCQTCKVKVLAGSESLNPPTELEKNWIPEQRLQEGWRLGCQAAV 82
>gi|302185751|ref|ZP_07262424.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
syringae 642]
gi|422616362|ref|ZP_16685068.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
japonica str. M301072]
gi|422628422|ref|ZP_16693631.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv. pisi
str. 1704B]
gi|440720308|ref|ZP_20900727.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae
BRIP34876]
gi|440726436|ref|ZP_20906690.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae
BRIP34881]
gi|443645108|ref|ZP_21128958.1| Ferredoxin, 2Fe-2S, ISC system [Pseudomonas syringae pv. syringae
B64]
gi|330895882|gb|EGH28167.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
japonica str. M301072]
gi|330936990|gb|EGH41088.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv. pisi
str. 1704B]
gi|440366344|gb|ELQ03428.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae
BRIP34876]
gi|440366597|gb|ELQ03676.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae
BRIP34881]
gi|443285125|gb|ELS44130.1| Ferredoxin, 2Fe-2S, ISC system [Pseudomonas syringae pv. syringae
B64]
Length = 113
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK----K 142
+ +I ++ IE+ + CGG +C TC I +G + LNE E L K +
Sbjct: 27 ILDIAHEHHIEIESA------CGGVCACTTCHCVIREGFNSLNEADELEEDMLDKAWGLE 80
Query: 143 PESWRLACQTIVGNKE 158
P+S RL+CQ IVGN++
Sbjct: 81 PQS-RLSCQAIVGNED 95
>gi|425901327|ref|ZP_18877918.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
gi|397883160|gb|EJK99646.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas chlororaphis
subsp. aureofaciens 30-84]
Length = 113
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A G +L + DN IE+ + CGG +C TC + +G D LNE E
Sbjct: 20 EAAPGTSILE-VAHDNHIEIESA------CGGVCACTTCHCIVREGFDSLNEADELEEDL 72
Query: 139 LKKKPESW------RLACQTIVGNKE 158
L K +W RL+CQ IVG ++
Sbjct: 73 LDK---AWGLEAQSRLSCQAIVGEED 95
>gi|416874125|ref|ZP_11917935.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 152504]
gi|334843764|gb|EGM22348.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
aeruginosa 152504]
Length = 407
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C +++G E TE + +
Sbjct: 51 AGGKLLQTLATNNVFLSSA-------CGGGGTCAQCKCVVVEGG---GEMLPTEESHFTR 100
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 RQAKEGWRLSCQTPV 115
>gi|284165247|ref|YP_003403526.1| ferredoxin [Haloterrigena turkmenica DSM 5511]
gi|284014902|gb|ADB60853.1| ferredoxin [Haloterrigena turkmenica DSM 5511]
Length = 123
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE 144
++LR+++L+ + +NC G G+CGTC V I + +E T E R L P
Sbjct: 17 RILRDVLLEAGESPHNGRANWLNCRGHGTCGTCAVAI---EGDASEPTAAERRRLSLPPH 73
Query: 145 ----SWRLACQTIV 154
RL+CQT V
Sbjct: 74 DPDGGLRLSCQTRV 87
>gi|428319817|ref|YP_007117699.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
gi|428243497|gb|AFZ09283.1| adenylate/guanylate cyclase [Oscillatoria nigro-viridis PCC 7112]
Length = 351
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQTIVGNKENSGKVC 164
CGG C TC V I++G + + RT+ E KK +PE RLACQT V GKV
Sbjct: 36 CGGSARCSTCRVLIVEGLEFCSPRTSPEEELAKKLRLEPEI-RLACQTQVAG----GKVI 90
Query: 165 SRTM 168
R +
Sbjct: 91 LRRL 94
>gi|224023677|ref|ZP_03642043.1| hypothetical protein BACCOPRO_00391 [Bacteroides coprophilus DSM
18228]
gi|224016899|gb|EEF74911.1| hypothetical protein BACCOPRO_00391 [Bacteroides coprophilus DSM
18228]
Length = 422
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL-- 139
SG LL + ++N A CGG GSCG C ++++G E +E+ +
Sbjct: 51 SGSTLLNTLAVNNVFLPSA-------CGGKGSCGQCKCQVLEGG---GEILPSEVSHFSR 100
Query: 140 KKKPESWRLACQTIV 154
K++ + WRL CQ V
Sbjct: 101 KQQKDHWRLGCQVKV 115
>gi|121718224|ref|XP_001276139.1| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus
clavatus NRRL 1]
gi|119404337|gb|EAW14713.1| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus
clavatus NRRL 1]
Length = 201
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 30 LSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRN 89
++SPRR + V + P+P + E+ + FI D Y E A+ G+ LL +
Sbjct: 59 VNSPRRSFSATAGVQHGHITPPKPGE-ELHVSFIDK---DGQKYDFEVAE---GDNLL-D 110
Query: 90 IMLDNKIELYATYGKVMNCGGGGSCGTCIV-----EIIDGKDLLNERTNTELRYLKKKPE 144
I N +E+ CGG +C TC V E+ D + ++ N L E
Sbjct: 111 IAQANDLEMEGA------CGGSCACSTCHVIVEDPEMFDKMEEPSDDENDMLDLAFGLTE 164
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLA--FLQKE 180
+ RL CQ I+ K+ G V NL A F QK+
Sbjct: 165 TSRLGCQVIM-TKDLDGLVVQLPSMTRNLQASDFAQKQ 201
>gi|429732244|ref|ZP_19266861.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans Y4]
gi|429156690|gb|EKX99313.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans Y4]
Length = 118
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE + E L K +W
Sbjct: 30 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPCDQEEDMLDK---AWGLEI 86
Query: 147 --RLACQTIVGNKE 158
RL+CQ I+G+++
Sbjct: 87 DSRLSCQCIIGDED 100
>gi|389846715|ref|YP_006348954.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
gi|388244021|gb|AFK18967.1| ferredoxin I [Haloferax mediterranei ATCC 33500]
Length = 89
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 106 MNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE----SWRLACQTIV 154
+NC G GSCGTC V + + + RT E R L+ P RLACQT+V
Sbjct: 17 LNCHGRGSCGTCAVRV---QGPVTYRTKKETRRLRLPPHDPDSGLRLACQTLV 66
>gi|88800092|ref|ZP_01115662.1| Na(+)-translocating NADH-quinone reductase subunit F [Reinekea
blandensis MED297]
gi|88777218|gb|EAR08423.1| Na(+)-translocating NADH-quinone reductase subunit F [Reinekea
blandensis MED297]
Length = 408
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNER---TNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C +++DG L E T ELR E WRLACQ V
Sbjct: 71 CGGGGTCAQCKCKVLDGGGSALPTEEPHFTRGELR------EGWRLACQVAV 116
>gi|428165376|gb|EKX34372.1| hypothetical protein GUITHDRAFT_55409, partial [Guillardia theta
CCMP2712]
Length = 153
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 33 PRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIML 92
P RP + S P E E E+E Y E+ + GE LLR+ +L
Sbjct: 2 PPRPCRACSSAMSKTPGGGEEEGQYHEVE-----------YKGEKLRVKDGE-LLRSSLL 49
Query: 93 DNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES------W 146
+ + + + +NC G G+CGTC V I G+ E T E L P S
Sbjct: 50 RASLSPHNSLAQTINCRGLGTCGTCAVS-IQGRVSPAEWTAMERARLNFPPYSNDNNSLL 108
Query: 147 RLACQTIV 154
RLACQ V
Sbjct: 109 RLACQVRV 116
>gi|78189139|ref|YP_379477.1| chlorosome envelope protein I [Chlorobium chlorochromatii CaD3]
gi|78171338|gb|ABB28434.1| chlorosome envelope protein I [Chlorobium chlorochromatii CaD3]
Length = 145
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 91 MLDNKIELYATYGKVMN-------------CGGGGSCGTCIVEIIDGKDLLNERTNTELR 137
++ N I AT G+ + CGG G C TC V +++G + L+ + E
Sbjct: 3 LIVNDIACTATVGQTLGSAAWKNHSHVGAVCGGRGVCQTCYVTVLEGSEALSPLSEVEQA 62
Query: 138 YL--KKKPESWRLACQTIVGNKENSGKVCSR 166
+L +++ RLACQT + ++ + ++ SR
Sbjct: 63 FLSPRQQQAGGRLACQTRI-ERDGTIRILSR 92
>gi|393787946|ref|ZP_10376077.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides nordii CL02T12C05]
gi|392656159|gb|EIY49798.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides nordii CL02T12C05]
Length = 423
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E TE + K++ + WRL CQ V
Sbjct: 69 CGGKGSCGQCRCQVLEGG---GEILPTETGFFSRKQQADHWRLGCQVKV 114
>gi|374702980|ref|ZP_09709850.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
sp. S9]
Length = 407
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C I+ G E +TE + +
Sbjct: 50 AGGKLLQTLAANNVFLSSA-------CGGGGTCAQCKCVIVSGG---GEMLSTEESHFTR 99
Query: 142 KP--ESWRLACQTIV 154
+ E WRL+CQ V
Sbjct: 100 REAKEGWRLSCQAAV 114
>gi|392408069|ref|YP_006444677.1| metal-binding protein [Anaerobaculum mobile DSM 13181]
gi|390621205|gb|AFM22352.1| putative metal-binding protein [Anaerobaculum mobile DSM 13181]
Length = 611
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK-PESWRLACQTIV 154
CGG G CG C V + DG +L + E+++L ++ E WRLACQ V
Sbjct: 46 GCGGLGKCGRCKV-MTDG--ILGRPSQIEMKHLGEELDEGWRLACQATV 91
>gi|261867566|ref|YP_003255488.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|365967354|ref|YP_004948916.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|387120476|ref|YP_006286359.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415763537|ref|ZP_11482144.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|415769231|ref|ZP_11484082.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416032087|ref|ZP_11572720.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|416050646|ref|ZP_11577022.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|416067132|ref|ZP_11582181.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|418465210|ref|ZP_13036147.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|444334429|ref|ZP_21149979.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|444345163|ref|ZP_21153186.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261412898|gb|ACX82269.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|347993836|gb|EGY35165.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|348000466|gb|EGY41250.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|348002303|gb|EGY43005.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348654526|gb|EGY70136.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348657590|gb|EGY75178.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|359756142|gb|EHK90301.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|365746267|gb|AEW77172.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|385874968|gb|AFI86527.1| 2Fe-2S type ferredoxin [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|443543303|gb|ELT53560.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443550413|gb|ELT58724.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 113
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE + E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPCDQEEDMLDK---AWGLEI 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ I+G+++
Sbjct: 82 DSRLSCQCIIGDED 95
>gi|307544810|ref|YP_003897289.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
elongata DSM 2581]
gi|307216834|emb|CBV42104.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
elongata DSM 2581]
Length = 410
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL N + N I L + CGGGGSC C VE G L E ++ LR
Sbjct: 54 AGGKLL-NTLAANGIFLSSA------CGGGGSCAQCRCRVEEGGGSILPTEESHFTLR-- 104
Query: 140 KKKPESWRLACQTIV 154
+K E WRL+CQ V
Sbjct: 105 -EKKEGWRLSCQVPV 118
>gi|448442265|ref|ZP_21589489.1| ferredoxin [Halorubrum saccharovorum DSM 1137]
gi|445687883|gb|ELZ40157.1| ferredoxin [Halorubrum saccharovorum DSM 1137]
Length = 104
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-- 143
+LR+++ + + +Y K +NC G GSCG+C V+ +DG+ ++E E L P
Sbjct: 18 VLRDVLEEAGLSVYNGKMKQLNCRGAGSCGSCAVQ-VDGE--VSEPGKKETARLWLPPHH 74
Query: 144 --ESWRLACQTIV 154
RLACQT V
Sbjct: 75 PSHDVRLACQTRV 87
>gi|393783876|ref|ZP_10372045.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides salyersiae CL02T12C01]
gi|392667535|gb|EIY61042.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides salyersiae CL02T12C01]
Length = 423
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E TE + K++ + WRL CQ V
Sbjct: 69 CGGKGSCGQCRCQVLEGG---GEILPTETGFFSRKQQADHWRLGCQVKV 114
>gi|392421851|ref|YP_006458455.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri CCUG 29243]
gi|390984039|gb|AFM34032.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri CCUG 29243]
Length = 407
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + +N A CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLAANNIFLSSA-------CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|146282989|ref|YP_001173142.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri A1501]
gi|339494708|ref|YP_004715001.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|145571194|gb|ABP80300.1| Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6
[Pseudomonas stutzeri A1501]
gi|338802080|gb|AEJ05912.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 407
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + +N A CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLAANNIFLSSA-------CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|90417528|ref|ZP_01225450.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium HTCC2207]
gi|90330681|gb|EAS45965.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2207]
Length = 407
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 81 ISGEKLLRNIMLDNKIELYATYGKVM--NCGGGGSCGTCIVEIIDGKD--LLNERTNTEL 136
I+GEK + D ++ + G + CGGGGSC C I DG L E ++
Sbjct: 40 INGEKTITVAAGDKLLQTLSNAGLFLPSACGGGGSCAQCKCVIADGGGSMLPTEESHFNR 99
Query: 137 RYLKKKPESWRLACQTIV 154
R + E WRL+CQ V
Sbjct: 100 R---EAAEGWRLSCQVPV 114
>gi|428221771|ref|YP_007105941.1| ferredoxin [Synechococcus sp. PCC 7502]
gi|427995111|gb|AFY73806.1| ferredoxin [Synechococcus sp. PCC 7502]
Length = 332
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 60 LEFIAPRAGDDGSY---PVERAKAIS-GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCG 115
L F P D +Y ++ A + E L +I+L+NK+ + CGG G C
Sbjct: 157 LTFAVPDVQDTETYIGLKIDGKHATTPRETRLLSILLNNKVSILKA------CGGQGRCA 210
Query: 116 TCIVEIIDGKDLLNERTNTELRYL---KKKPESWRLACQ 151
TC V + G + L T EL L K + + RLACQ
Sbjct: 211 TCHVFVDKGMEYLTPPTEQELMTLSMMKIEQPNARLACQ 249
>gi|78186511|ref|YP_374554.1| chlorosome envelope protein J [Chlorobium luteolum DSM 273]
gi|78166413|gb|ABB23511.1| chlorosome envelope protein J [Chlorobium luteolum DSM 273]
Length = 226
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG G C +C V + +G + L+ +N E + +K E RLACQT++
Sbjct: 33 CGGNGICQSCFVYVQEGMEHLSPLSNVEKACISEKLLAEGGRLACQTVI 81
>gi|416076203|ref|ZP_11585331.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444344826|ref|ZP_21153011.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348005346|gb|EGY45833.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443543327|gb|ELT53582.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 113
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE + E L K +W
Sbjct: 25 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPCDQEEDMLDK---AWGLEI 81
Query: 147 --RLACQTIVGNKE 158
RL+CQ I+G+++
Sbjct: 82 DSRLSCQCIIGDED 95
>gi|338998613|ref|ZP_08637285.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
TD01]
gi|338764530|gb|EGP19490.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
TD01]
Length = 410
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCI--VEIIDGKDLLNER 131
P + +G KLL N + N I L + CGGGGSC C VE G L E
Sbjct: 46 PEHTLQTQAGGKLL-NTLAANGIFLSSA------CGGGGSCAQCKCRVEEGGGSILPTEE 98
Query: 132 TNTELRYLKKKPESWRLACQTIV 154
++ +R +K E WRL+CQ V
Sbjct: 99 SHFTMR---EKKEGWRLSCQVPV 118
>gi|333993623|ref|YP_004526236.1| ferredoxin [Treponema azotonutricium ZAS-9]
gi|333734266|gb|AEF80215.1| ferredoxin [Treponema azotonutricium ZAS-9]
Length = 662
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
C G GSCG C+V I+ G+ E + + E WRLACQT V
Sbjct: 53 CSGNGSCGKCLVRILSGR---AESEKSRHISPESYEEGWRLACQTKV 96
>gi|222106624|ref|YP_002547415.1| adenylate cyclase [Agrobacterium vitis S4]
gi|221737803|gb|ACM38699.1| adenylate cyclase [Agrobacterium vitis S4]
Length = 571
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTE---LRYLKKKPESWRLACQ 151
CGG G C TC V++IDG+ LL E L +K P RLACQ
Sbjct: 295 CGGKGQCSTCRVQVIDGEQLLPPAETLEQGTLNRIKAGPGV-RLACQ 340
>gi|119498775|ref|XP_001266145.1| 2Fe-2S iron-sulfur cluster binding domain protein [Neosartorya
fischeri NRRL 181]
gi|119414309|gb|EAW24248.1| 2Fe-2S iron-sulfur cluster binding domain protein [Neosartorya
fischeri NRRL 181]
Length = 201
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 30 LSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRN 89
+SPRR ++ V + P+P + E+ + FI D + E A+ G+ LL +
Sbjct: 59 FNSPRRNFSITAGVQHGHITPPKPGE-ELHVSFIDK---DGQKHDFEVAE---GDNLL-D 110
Query: 90 IMLDNKIELYATYGKVMNCGGGGSCGTCIV-----EIIDGKDLLNERTNTELRYLKKKPE 144
I N +E+ CGG +C TC V E+ D + ++ N L E
Sbjct: 111 IAQANDLEMEGA------CGGSCACSTCHVIVEDPEVFDKMEEPSDDENDMLDLAFGLTE 164
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLA--FLQKE 180
+ RL CQ +V NK+ G V NL A F QK+
Sbjct: 165 TSRLGCQ-VVMNKDLDGLVVRLPSMTRNLQASDFAQKK 201
>gi|70984896|ref|XP_747954.1| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus
fumigatus Af293]
gi|66845582|gb|EAL85916.1| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus
fumigatus Af293]
gi|159126120|gb|EDP51236.1| 2Fe-2S iron-sulfur cluster binding domain protein [Aspergillus
fumigatus A1163]
Length = 201
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 22/158 (13%)
Query: 30 LSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRN 89
+SPRR ++ V + P+P + E+ + FI D + E A+ G+ LL +
Sbjct: 59 FNSPRRSFSITARVQHGHVTPPKPGE-ELHVSFIDK---DGQKHDFEVAE---GDNLL-D 110
Query: 90 IMLDNKIELYATYGKVMNCGGGGSCGTCIV-----EIIDGKDLLNERTNTELRYLKKKPE 144
I N +E+ CGG +C TC V E+ D + ++ N L E
Sbjct: 111 IAQANDLEMEGA------CGGSCACSTCHVIVEDPEVFDKMEEPSDDENDMLDLAFGLTE 164
Query: 145 SWRLACQTIVGNKENSGKVCSRTMFLLNLLA--FLQKE 180
+ RL CQ +V NK+ G V NL A F QK+
Sbjct: 165 TSRLGCQ-VVMNKDLDGLVVRLPSMTRNLQASDFAQKK 201
>gi|409398237|ref|ZP_11249058.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
sp. Chol1]
gi|409117370|gb|EKM93804.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
sp. Chol1]
Length = 407
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + N I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-SNNIFLSSA------CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|289677954|ref|ZP_06498844.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
syringae FF5]
gi|424066436|ref|ZP_17803902.1| (2Fe-2S) ferredoxin [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424071087|ref|ZP_17808514.1| (2Fe-2S) ferredoxin [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407999546|gb|EKG39928.1| (2Fe-2S) ferredoxin [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408002285|gb|EKG42544.1| (2Fe-2S) ferredoxin [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 113
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK----KPESWRLACQTIVGNKE 158
CGG +C TC I +G + LNE E L K +P+S RL+CQ IVGN++
Sbjct: 42 CGGVCACTTCHCVIREGFNSLNEADELEEDMLDKAWGLEPQS-RLSCQAIVGNED 95
>gi|89094307|ref|ZP_01167248.1| Na(+)-translocating NADH-quinone reductase subunit F
[Neptuniibacter caesariensis]
gi|89081366|gb|EAR60597.1| Na(+)-translocating NADH-quinone reductase subunit F
[Oceanospirillum sp. MED92]
Length = 408
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C E+ G L E ++ +R K E WRL+CQ V
Sbjct: 71 CGGGGTCAQCACEVHSGGGSMLPTEESHFTMREAK---EGWRLSCQVAV 116
>gi|423268002|ref|ZP_17246974.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T00C42]
gi|423274544|ref|ZP_17253491.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T12C13]
gi|423285856|ref|ZP_17264737.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 615]
gi|392704970|gb|EIY98102.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T00C42]
gi|392705570|gb|EIY98700.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL05T12C13]
gi|404578540|gb|EKA83261.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 615]
Length = 423
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E TE + K++ + WRL CQ V
Sbjct: 69 CGGKGSCGQCRCQVLEGG---GEILPTETGFFSRKEQADHWRLGCQVKV 114
>gi|53713305|ref|YP_099297.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
fragilis YCH46]
gi|265763380|ref|ZP_06091948.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_16]
gi|336409624|ref|ZP_08590106.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_56FAA]
gi|375358429|ref|YP_005111201.1| putative Na+-translocating NADH-quinone reductase subunit F
[Bacteroides fragilis 638R]
gi|383118290|ref|ZP_09939032.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_2_5]
gi|423249933|ref|ZP_17230949.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T00C08]
gi|423255433|ref|ZP_17236362.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T12C07]
gi|423257680|ref|ZP_17238603.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T00C01]
gi|423265353|ref|ZP_17244356.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T12C05]
gi|52216170|dbj|BAD48763.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides
fragilis YCH46]
gi|251945562|gb|EES85969.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_2_5]
gi|263255988|gb|EEZ27334.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_16]
gi|301163110|emb|CBW22659.1| putative Na+-translocating NADH-quinone reductase subunit F
[Bacteroides fragilis 638R]
gi|335946005|gb|EGN07811.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_56FAA]
gi|387778048|gb|EIK40144.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T00C01]
gi|392651078|gb|EIY44743.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T12C07]
gi|392653995|gb|EIY47644.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL03T00C08]
gi|392703011|gb|EIY96155.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis CL07T12C05]
Length = 423
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E TE + K++ + WRL CQ V
Sbjct: 69 CGGKGSCGQCRCQVLEGG---GEILPTETGFFSRKEQADHWRLGCQVKV 114
>gi|313146675|ref|ZP_07808868.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|423276992|ref|ZP_17255906.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 610]
gi|424663265|ref|ZP_18100302.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 616]
gi|313135442|gb|EFR52802.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404576955|gb|EKA81693.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 616]
gi|404587468|gb|EKA92007.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides fragilis HMW 610]
Length = 423
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E TE + K++ + WRL CQ V
Sbjct: 69 CGGKGSCGQCRCQVLEGG---GEILPTETGFFSRKEQADHWRLGCQVKV 114
>gi|448729309|ref|ZP_21711626.1| ferredoxin I 5 [Halococcus saccharolyticus DSM 5350]
gi|445795256|gb|EMA45785.1| ferredoxin I 5 [Halococcus saccharolyticus DSM 5350]
Length = 122
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
LR+ L++++ +Y T + NCGG G C TC VE+
Sbjct: 35 LRDASLEHELPVYGTLSQYANCGGRGLCSTCTVEV 69
>gi|60681554|ref|YP_211698.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
fragilis NCTC 9343]
gi|60492988|emb|CAH07767.1| putative Na+-translocating NADH-quinone reductase subunit F
[Bacteroides fragilis NCTC 9343]
Length = 423
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E TE + K++ + WRL CQ V
Sbjct: 69 CGGKGSCGQCRCQVLEGG---GEILPTETGFFSRKEQADHWRLGCQVKV 114
>gi|319943131|ref|ZP_08017414.1| Na(+)-translocating NADH-quinone reductase subunit F [Lautropia
mirabilis ATCC 51599]
gi|319743673|gb|EFV96077.1| Na(+)-translocating NADH-quinone reductase subunit F [Lautropia
mirabilis ATCC 51599]
Length = 408
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGT--CIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGGSC CIVE G+ L E + R E WRL+CQT V
Sbjct: 69 CGGGGSCAQCKCIVESGGGEMLPTEEAHFTRR---DASEGWRLSCQTPV 114
>gi|260892252|ref|YP_003238349.1| ferredoxin [Ammonifex degensii KC4]
gi|260864393|gb|ACX51499.1| ferredoxin [Ammonifex degensii KC4]
Length = 622
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153
CGG G CG C V++ +GK + N L L+++ E W LACQ +
Sbjct: 36 CGGEGVCGRCRVQVQEGK--VTSPPNPRLS-LQERQEGWVLACQAV 78
>gi|407276424|ref|ZP_11104894.1| 2Fe-2S ferredoxin [Rhodococcus sp. P14]
Length = 106
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 103 GKVMNCGGGGSCGTCIVEII-DGKDLLNERTNTE---LRYLKKKPESWRLACQTIV 154
G V CGG SC TC V + + DL E T+ E L Y E RL+CQ IV
Sbjct: 35 GIVAECGGSCSCATCHVHVDSEFADLFGEATDEERDLLEYADDVDERSRLSCQLIV 90
>gi|325297931|ref|YP_004257848.1| NADH:ubiquinone oxidoreductase subunit F [Bacteroides salanitronis
DSM 18170]
gi|324317484|gb|ADY35375.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides salanitronis
DSM 18170]
Length = 420
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL-- 139
SG LL + ++N A CGG GSCG C ++++G E +E+ +
Sbjct: 49 SGSTLLNTLAVNNIFLSSA-------CGGKGSCGQCKCQVLEGG---GEILPSEVGHFSR 98
Query: 140 KKKPESWRLACQTIV 154
K++ + WRL CQ V
Sbjct: 99 KQQKDHWRLGCQVKV 113
>gi|372273351|ref|ZP_09509399.1| Na(+)-translocating NADH-quinone reductase subunit F
[Marinobacterium stanieri S30]
Length = 410
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKD--LLNERTNTELRYL 139
+G KLL+ + D I L + CGGGG+C C ++ +G L E ++ LR
Sbjct: 53 AGGKLLQT-LADKGIFLASA------CGGGGTCAQCKCQVTEGGGSMLPTEESHFTLREG 105
Query: 140 KKKPESWRLACQTIV 154
K E WRL+CQ V
Sbjct: 106 K---EGWRLSCQVAV 117
>gi|89897937|ref|YP_515047.1| Na(+)-translocating NADH-quinone reductase subunit F [Chlamydophila
felis Fe/C-56]
gi|123735929|sp|Q255Y6.1|NQRF_CHLFF RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|89331309|dbj|BAE80902.1| Na (+)-translocating NADH-quinone reductase subunit F
[Chlamydophila felis Fe/C-56]
Length = 431
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIVGNKEN 159
CGG +C C V+I+ G D L +R R L+ + WRL+CQT V + N
Sbjct: 76 CGGKATCKQCKVKIVKGADQPLETDRATFSKRQLE---QGWRLSCQTKVQHDMN 126
>gi|448491969|ref|ZP_21608637.1| ferredoxin [Halorubrum californiensis DSM 19288]
gi|445692187|gb|ELZ44368.1| ferredoxin [Halorubrum californiensis DSM 19288]
Length = 149
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELRYLKKKPE 144
LR ++LD + YA + +NCGG G C TC V + +G + ++R Y
Sbjct: 53 LRRVLLDAGLSPYAPATRRLNCGGRGICATCGVRVREGPPAEHWHDRLADRFGYP----- 107
Query: 145 SWRLACQTIVGNKENSGKVCSRTM 168
RL+CQ V G V R
Sbjct: 108 --RLSCQIPVDRPMTVGLVDKRVW 129
>gi|444347740|ref|ZP_21155564.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443548247|gb|ELT57540.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 110
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE + E L K +W
Sbjct: 22 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPCDQEEDMLDK---AWGLEI 78
Query: 147 --RLACQTIVGNKE 158
RL+CQ I+G+++
Sbjct: 79 DSRLSCQCIIGDED 92
>gi|282879618|ref|ZP_06288349.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella timonensis
CRIS 5C-B1]
gi|281306566|gb|EFA98595.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella timonensis
CRIS 5C-B1]
Length = 423
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 23/91 (25%)
Query: 108 CGGGGSCGTCIVEIID--GKDLLNERTNTELRYLKKKPESWRLACQ-------------T 152
CGG GSCG C +++I+ G+ L +ER + + +K +WRL CQ T
Sbjct: 70 CGGKGSCGQCKLQVIEGGGEILDSERPHFSRKEIKN---NWRLGCQCKVKGDLKIKIPET 126
Query: 153 IVGNKENSGKVCSRTMFLLNLLAFLQKEMRV 183
++G KE V S N+ +F+ KE +V
Sbjct: 127 VLGVKEWECTVISNK----NVSSFI-KEFKV 152
>gi|397687620|ref|YP_006524939.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 10701]
gi|395809176|gb|AFN78581.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri DSM 10701]
Length = 407
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + N I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-SNNIFLSSA------CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|421616791|ref|ZP_16057793.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
gi|421617279|ref|ZP_16058273.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
gi|409780777|gb|EKN60394.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
gi|409781272|gb|EKN60874.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri KOS6]
Length = 407
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + +N A CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLAANNIFLSSA-------CGGGGTCAQCKCIVERGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|330502566|ref|YP_004379435.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina NK-01]
gi|328916852|gb|AEB57683.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
mendocina NK-01]
Length = 407
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGT--CIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C CIVE G+ L E ++ R + E WRL+CQT V
Sbjct: 69 CGGGGTCAQCKCIVESGGGEMLSTEESHFTKREAR---EGWRLSCQTPV 114
>gi|374996396|ref|YP_004971895.1| metal-binding protein [Desulfosporosinus orientis DSM 765]
gi|357214762|gb|AET69380.1| putative metal-binding protein [Desulfosporosinus orientis DSM 765]
Length = 610
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 105 VMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK--KKPESWRLACQTIV 154
+ CGG G+CG C V+I G ++ T E ++LK + W LACQ I+
Sbjct: 33 ISTCGGKGTCGKCRVQITTGTP--SQMTEIEKKFLKVSEWEAGWTLACQHIL 82
>gi|288932107|ref|YP_003436167.1| ferredoxin [Ferroglobus placidus DSM 10642]
gi|288894355|gb|ADC65892.1| ferredoxin [Ferroglobus placidus DSM 10642]
Length = 630
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQT 152
CGG +CG C V I G++ L++ T E R L K+ +++RLAC T
Sbjct: 38 CGGKLTCGKCQVVIEQGEENLSQMTEDERRLLDKRKAGKNYRLACVT 84
>gi|448539635|ref|ZP_21623101.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-646]
gi|448548855|ref|ZP_21627748.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-645]
gi|448555924|ref|ZP_21631782.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-644]
gi|445710377|gb|ELZ62192.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-646]
gi|445713948|gb|ELZ65720.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-645]
gi|445717209|gb|ELZ68929.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. ATCC BAA-644]
Length = 123
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK 125
+LR+ +LD I YA K +NCGG G C TC V + G+
Sbjct: 41 VLRDALLDAGISPYARLTKRVNCGGRGLCATCGVRVRSGE 80
>gi|292655868|ref|YP_003535765.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax volcanii DS2]
gi|433419685|ref|ZP_20405324.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. BAB2207]
gi|448289857|ref|ZP_21481019.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax volcanii DS2]
gi|448570487|ref|ZP_21639317.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax lucentense DSM 14919]
gi|448595447|ref|ZP_21653150.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax alexandrinus JCM 10717]
gi|291371179|gb|ADE03406.1| 2Fe-2S iron-sulfur cluster binding domain protein [Haloferax
volcanii DS2]
gi|432199384|gb|ELK55565.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sp. BAB2207]
gi|445581039|gb|ELY35403.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax volcanii DS2]
gi|445723134|gb|ELZ74781.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax lucentense DSM 14919]
gi|445742901|gb|ELZ94391.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax alexandrinus JCM 10717]
Length = 123
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK 125
+LR+ +LD I YA K +NCGG G C TC V + G+
Sbjct: 41 VLRDALLDAGISPYARLTKRVNCGGRGLCATCGVRVRSGE 80
>gi|386288435|ref|ZP_10065576.1| ferredoxin [gamma proteobacterium BDW918]
gi|385278451|gb|EIF42422.1| ferredoxin [gamma proteobacterium BDW918]
Length = 106
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK--DLLNERTNTELRYLKKK 142
K L I LDN I G +CGG +CGTC V II+G ++ T EL+ L
Sbjct: 22 KSLMQIALDNGIP-----GIDADCGGVCACGTCHV-IIEGGAVNITGGATEDELQMLDLT 75
Query: 143 P---ESWRLACQTI 153
P E+ RLACQ I
Sbjct: 76 PERSETSRLACQII 89
>gi|222478486|ref|YP_002564723.1| ferredoxin [Halorubrum lacusprofundi ATCC 49239]
gi|222451388|gb|ACM55653.1| ferredoxin [Halorubrum lacusprofundi ATCC 49239]
Length = 104
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-E 144
+LR+++ + + +Y + NC G GSCGTC V++ ++ L P
Sbjct: 18 ILRDVLKEAGLSVYNGRAEQFNCRGTGSCGTCAVQVDGAVSEPGKKEKARLWLPPHHPSH 77
Query: 145 SWRLACQTIV 154
RLACQT V
Sbjct: 78 DVRLACQTRV 87
>gi|334119774|ref|ZP_08493858.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
gi|333457415|gb|EGK86038.1| adenylate/guanylate cyclase [Microcoleus vaginatus FGP-2]
Length = 351
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQTIVGNKENSGKVC 164
CGG C TC V +++G + + RT+ E KK +PE RLACQT V GKV
Sbjct: 36 CGGSARCSTCRVLVVEGLEFCSPRTSPEEELAKKLRLEPEI-RLACQTQVA----GGKVI 90
Query: 165 SRTM 168
R +
Sbjct: 91 LRRL 94
>gi|55379207|ref|YP_137057.1| (2Fe-2S)-binding protein [Haloarcula marismortui ATCC 43049]
gi|448638301|ref|ZP_21676274.1| (2Fe-2S)-binding protein [Haloarcula sinaiiensis ATCC 33800]
gi|448655202|ref|ZP_21682054.1| (2Fe-2S)-binding protein [Haloarcula californiae ATCC 33799]
gi|55231932|gb|AAV47351.1| 2Fe-2S iron-sulfur cluster binding domain [Haloarcula marismortui
ATCC 43049]
gi|445763550|gb|EMA14737.1| (2Fe-2S)-binding protein [Haloarcula sinaiiensis ATCC 33800]
gi|445765651|gb|EMA16789.1| (2Fe-2S)-binding protein [Haloarcula californiae ATCC 33799]
Length = 111
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++LD + + Y +NCGG G C TC V + + D + + R+
Sbjct: 24 VLRDVLLDADLSPHGRYATRVNCGGRGICATCGVRLAEPPDPDHWHDDLADRFGYP---- 79
Query: 146 WRLACQTIV 154
RL+CQ V
Sbjct: 80 -RLSCQLQV 87
>gi|300855252|ref|YP_003780236.1| hypothetical protein CLJU_c20720 [Clostridium ljungdahlii DSM
13528]
gi|300435367|gb|ADK15134.1| conserved hypothetical protein with a metal binding domain
[Clostridium ljungdahlii DSM 13528]
Length = 617
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG G+CG C ++I+D K+L + T EL++L++K E LAC+T V
Sbjct: 38 CGGMGTCGKCRIKILD-KNL--KATEKELKFLEEKELKEGIHLACETKV 83
>gi|452747553|ref|ZP_21947348.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri NF13]
gi|452008669|gb|EME00907.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri NF13]
Length = 407
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + N I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-SNNIFLSSA------CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|149919831|ref|ZP_01908307.1| Na(+)-translocating NADH-quinone reductase subunit F [Plesiocystis
pacifica SIR-1]
gi|149819278|gb|EDM78711.1| Na(+)-translocating NADH-quinone reductase subunit F [Plesiocystis
pacifica SIR-1]
Length = 421
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTEL 136
+A I L N + DNKI + + CGG GSCG CIV + +G + TE
Sbjct: 59 KALKIPAGATLLNTLADNKIFIPSA------CGGMGSCGVCIVHVHEGGGAV---LPTEE 109
Query: 137 RYLKKKP--ESWRLACQTIV 154
+L + E RLACQ V
Sbjct: 110 GWLSRGQIREGCRLACQVKV 129
>gi|186473714|ref|YP_001861056.1| oxidoreductase FAD/NAD(P)-binding subunit [Burkholderia phymatum
STM815]
gi|184196046|gb|ACC74010.1| oxidoreductase FAD/NAD(P)-binding domain protein [Burkholderia
phymatum STM815]
Length = 459
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 37 KFVSFAVNSTEP-SSPEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNK 95
+F + + NST P +S ++ + F G R A +G+ LL +
Sbjct: 332 RFFTDSFNSTRPLASNSSPLTDVSVSFEGQMQG--------RIHAETGQTLL-------Q 376
Query: 96 IELYATYGKVMNCGGGGSCGTCIVEI----IDGKDLLNERTNTELRYLKKKPESWRLACQ 151
+ L A CGGG CGTC V + +DG +NE L L+ E RLACQ
Sbjct: 377 VLLRAGLNLDHYCGGGAVCGTCKVRVEPPLLDG---MNEDEADLLECLESSSEGHRLACQ 433
Query: 152 TIVGNKENSGKV 163
+ + S +
Sbjct: 434 MALCQQVGSHTI 445
>gi|431926806|ref|YP_007239840.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas stutzeri RCH2]
gi|431825093|gb|AGA86210.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Pseudomonas stutzeri RCH2]
Length = 407
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGT--CIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C CIVE G+ L E ++ R + E WRL+CQT V
Sbjct: 69 CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR---EAGEGWRLSCQTPV 114
>gi|418294241|ref|ZP_12906137.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379065620|gb|EHY78363.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 407
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + N I L + CGGGG+C CIVE G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-SNNIFLSSA------CGGGGTCAQCKCIVESGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|170079268|ref|YP_001735906.1| ferredoxin [Synechococcus sp. PCC 7002]
gi|169886937|gb|ACB00651.1| probable ferredoxin [Synechococcus sp. PCC 7002]
Length = 184
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 60 LEFIAPRAGDD--GSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTC 117
L+F+ P++ + P+++ + G++ L +++L + + CG G C TC
Sbjct: 6 LDFLPPQSPVNKISIQPLDKTVPVQGQETLLDVLLREDMSVMQA------CGAQGRCATC 59
Query: 118 IVEIIDGKDLL---NERTNTELRYLKKKPESWRLACQT 152
+ + G + L N++ L ++ + RLACQT
Sbjct: 60 HIYVKSGGEALSPMNDQERLTLSFIATAQANSRLACQT 97
>gi|453083525|gb|EMF11571.1| NAD(P)-binding protein [Mycosphaerella populorum SO2202]
Length = 340
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYA-------TYGKVMNCGG 110
I+L + P GDD +YPV A GEK + + + K A GK++ G
Sbjct: 159 IDLAWAPPPYGDDRAYPVYAASKAEGEKAMWQFVKEQKPSFIANAILPNFNMGKILPGGS 218
Query: 111 GGSCGTCIVEIIDGK 125
G+ G I ++ +GK
Sbjct: 219 PGATGGAIPDLYNGK 233
>gi|384098196|ref|ZP_09999315.1| Na(+)-translocating NADH-quinone reductase subunit F [Imtechella
halotolerans K1]
gi|383836342|gb|EID75755.1| Na(+)-translocating NADH-quinone reductase subunit F [Imtechella
halotolerans K1]
Length = 430
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGGGG+C C ++DG E TE + +K E WRL CQ V
Sbjct: 70 CGGGGTCIQCKCRVLDGG---GEALPTETPHFTRKELAEGWRLGCQVKV 115
>gi|359395286|ref|ZP_09188338.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
boliviensis LC1]
gi|357969551|gb|EHJ91998.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas
boliviensis LC1]
Length = 410
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCI--VEIIDGKDLLNERTNTELRYL 139
+G KLL N + N I L + CGGGGSC C VE G L E ++ +R
Sbjct: 54 AGGKLL-NTLAANGIFLSSA------CGGGGSCAQCKCRVEEGGGSILPTEESHFTMR-- 104
Query: 140 KKKPESWRLACQTIV 154
+K E WRL+CQ V
Sbjct: 105 -EKKEGWRLSCQVPV 118
>gi|270340101|ref|ZP_06007039.2| NADH:ubiquinone oxidoreductase subunit F [Prevotella bergensis DSM
17361]
gi|270332653|gb|EFA43439.1| NADH:ubiquinone oxidoreductase subunit F [Prevotella bergensis DSM
17361]
Length = 421
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGG GSC C ++++G E ++E + +K E WRL CQT V
Sbjct: 68 CGGKGSCAQCKCQVLEGG---GEILDSEKSHFTRKQIKEHWRLGCQTKV 113
>gi|166032609|ref|ZP_02235438.1| hypothetical protein DORFOR_02324 [Dorea formicigenerans ATCC
27755]
gi|166026966|gb|EDR45723.1| 2Fe-2S iron-sulfur cluster binding domain protein [Dorea
formicigenerans ATCC 27755]
Length = 609
Score = 38.5 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 16/67 (23%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--P 143
L +NI +DN C G G CG C V I+ G+ + E ++TELR+LK +
Sbjct: 34 LAQNIFIDNP------------CNGKGVCGKCKVRIVSGE--VGEVSSTELRFLKPEEVK 79
Query: 144 ESWRLAC 150
RL+C
Sbjct: 80 SGVRLSC 86
>gi|255691834|ref|ZP_05415509.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides finegoldii DSM 17565]
gi|260622557|gb|EEX45428.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides finegoldii
DSM 17565]
Length = 424
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEIPHFSRKQQQDHWRLGCQVKV 115
>gi|423299691|ref|ZP_17277716.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides finegoldii CL09T03C10]
gi|408473500|gb|EKJ92022.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides finegoldii CL09T03C10]
Length = 424
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEIPHFSRKQQQDHWRLGCQVKV 115
>gi|387771056|ref|ZP_10127228.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella bettyae CCUG 2042]
gi|386902975|gb|EIJ67796.1| ferredoxin, 2Fe-2S type, ISC system [Pasteurella bettyae CCUG 2042]
Length = 113
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
A +G+ LL + L+ IE+ C G +C TC I +G D LNE T+ E
Sbjct: 20 DAAAGDNLLE-VALEAGIEIEHA------CDGSCACTTCHCIIREGGDSLNESTDQEDDM 72
Query: 139 LKKKPESW------RLACQTIVGNKE 158
L K +W RL+CQ +GN++
Sbjct: 73 LDK---AWGLEVDSRLSCQCKIGNED 95
>gi|443695410|gb|ELT96328.1| hypothetical protein CAPTEDRAFT_187825 [Capitella teleta]
Length = 398
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGGGG+C C +++ G E TE + K+ E WRL+CQ V
Sbjct: 61 CGGGGTCAQCKCKVLSGG---GEMLPTERSHFTKREEKEGWRLSCQVAV 106
>gi|332980823|ref|YP_004462264.1| ferredoxin [Mahella australiensis 50-1 BON]
gi|332698501|gb|AEE95442.1| ferredoxin [Mahella australiensis 50-1 BON]
Length = 98
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP- 143
K L I +DN IE+ CGG G C TC + G++ L+E E L K
Sbjct: 19 KTLLEIAMDNGIEVRH------ECGGHGMCTTCRCIVQKGRENLSEVNEKEKEKLGAKVL 72
Query: 144 ESWRLACQTIV 154
++RL+CQT+V
Sbjct: 73 MNYRLSCQTVV 83
>gi|409730974|ref|ZP_11272526.1| ferredoxin I 5 [Halococcus hamelinensis 100A6]
gi|448724242|ref|ZP_21706750.1| ferredoxin I 5 [Halococcus hamelinensis 100A6]
gi|445785912|gb|EMA36693.1| ferredoxin I 5 [Halococcus hamelinensis 100A6]
Length = 113
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
LR+ +L++ +Y T NCGG G C TC VE+ G + + +R+
Sbjct: 26 LRDALLEHGFPVYGTISTHANCGGRGLCATCTVEVDPGPEPTHWHDVAAVRF 77
>gi|410479993|ref|YP_006767630.1| ferredoxin [Leptospirillum ferriphilum ML-04]
gi|424866614|ref|ZP_18290446.1| Ferredoxin [Leptospirillum sp. Group II 'C75']
gi|124516574|gb|EAY58082.1| Ferredoxin [Leptospirillum rubarum]
gi|387222703|gb|EIJ77122.1| Ferredoxin [Leptospirillum sp. Group II 'C75']
gi|406775245|gb|AFS54670.1| ferredoxin [Leptospirillum ferriphilum ML-04]
Length = 109
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK---PESWRLACQTIVGNKE 158
CGG +CGTC V + +G D L R N + +L K + RL CQT +G+ +
Sbjct: 36 CGGNAACGTCTVVVKEGADSLKPR-NAKESFLAKAMMLGDDQRLGCQTEMGSGD 88
>gi|119356704|ref|YP_911348.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
gi|119354053|gb|ABL64924.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
Length = 222
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C +C V + +G + L++ E ++ K E RLAC+T + KE V S
Sbjct: 33 CGGNGICQSCFVYVKEGSEYLSDPGEEEKTFISAKLLNEGGRLACRTTI-KKEGRISVLS 91
Query: 166 RTMFL------LNLLAFLQKEMRVTSLNHSKLPS 193
R +L LN+ F+ + ++LP
Sbjct: 92 RAEYLRRIVVGLNVPGFITYAQTIGDNVLNQLPG 125
>gi|373501032|ref|ZP_09591400.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella micans F0438]
gi|371950884|gb|EHO68736.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella micans F0438]
Length = 422
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++II+G L +ER + + +K WRL+CQ V
Sbjct: 69 CGGKGSCGQCRLQIIEGGGEILDSERPHFTRKEIKNH---WRLSCQCKV 114
>gi|345882637|ref|ZP_08834097.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. C561]
gi|345044568|gb|EGW48603.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. C561]
Length = 422
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C +++++G L +ER + + +K + WRL CQ V
Sbjct: 69 CGGKGSCGQCKLQVVEGGGEILDSERPHFSRKEIK---DHWRLGCQCKV 114
>gi|282877425|ref|ZP_06286248.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella buccalis ATCC
35310]
gi|281300477|gb|EFA92823.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella buccalis ATCC
35310]
Length = 423
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 23/91 (25%)
Query: 108 CGGGGSCGTCIVEIID--GKDLLNERTNTELRYLKKKPESWRLACQ-------------T 152
CGG GSCG C +++I+ G+ L +ER + + +K +WRL CQ T
Sbjct: 70 CGGKGSCGQCRLQVIEGGGEILDSERPHFTRKEIKN---NWRLGCQCKVKGDLKVKIPET 126
Query: 153 IVGNKENSGKVCSRTMFLLNLLAFLQKEMRV 183
++G KE V S N+ +F+ KE +V
Sbjct: 127 VLGVKEWECTVISNK----NVSSFI-KEFKV 152
>gi|434388902|ref|YP_007099513.1| ferredoxin [Chamaesiphon minutus PCC 6605]
gi|428019892|gb|AFY95986.1| ferredoxin [Chamaesiphon minutus PCC 6605]
Length = 156
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTE---LRYLKKKPESWRLACQT 152
CGG G C +C ++DG D L + T E L++ K RLACQ+
Sbjct: 36 CGGQGMCASCHFFVVDGVDSLTQPTTQEQMTLQFTKIDRPGARLACQS 83
>gi|317476038|ref|ZP_07935290.1| ubiquinone oxidoreductase [Bacteroides eggerthii 1_2_48FAA]
gi|316907676|gb|EFV29378.1| ubiquinone oxidoreductase [Bacteroides eggerthii 1_2_48FAA]
Length = 424
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + +K + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVVEGG---GEILPSEIPHFSRKQIQDHWRLGCQVKV 115
>gi|218130842|ref|ZP_03459646.1| hypothetical protein BACEGG_02437 [Bacteroides eggerthii DSM 20697]
gi|217987186|gb|EEC53517.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides eggerthii
DSM 20697]
Length = 438
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + +K + WRL CQ V
Sbjct: 84 CGGKGSCGQCKCQVVEGG---GEILPSEIPHFSRKQIQDHWRLGCQVKV 129
>gi|329955221|ref|ZP_08296178.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides clarus YIT
12056]
gi|328526220|gb|EGF53239.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides clarus YIT
12056]
Length = 438
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + +K + WRL CQ V
Sbjct: 84 CGGKGSCGQCKCQVVEGG---GEILPSEIPHFSRKQVQDHWRLGCQVKV 129
>gi|114565975|ref|YP_753129.1| hypothetical protein Swol_0420 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336910|gb|ABI67758.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 610
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 70 DGSYPVERAKAISGE-KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLL 128
DG V + +GE +LL +++ D IEL ++ C G G+CG C V II G+ L
Sbjct: 6 DGLSGVHVVCSSNGEIQLLMDLLDDTGIELESS------CAGNGTCGKCRVLIISGECLP 59
Query: 129 NERTNTELRYLKKKPESWRLACQTIV 154
EL K RLAC +V
Sbjct: 60 PGTAEMELLSPKDFKRGIRLACHCLV 85
>gi|416054577|ref|ZP_11579220.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|416080499|ref|ZP_11586266.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|416103663|ref|ZP_11589525.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348003486|gb|EGY44086.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348007808|gb|EGY48097.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348011224|gb|EGY51197.1| ferredoxin, 2Fe-2S type, ISC system [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 97
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 93 DNKIELYATYGKVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW---- 146
DN +E+ G ++ C G +C TC V + +G D LNE + E L K +W
Sbjct: 9 DNLLEVAHNAGVEIHHACDGSCACTTCHVVVREGGDSLNEPCDQEEDMLDK---AWGLEI 65
Query: 147 --RLACQTIVGNKE 158
RL+CQ I+G+++
Sbjct: 66 DSRLSCQCIIGDED 79
>gi|330504469|ref|YP_004381338.1| hypothetical protein [Pseudomonas mendocina NK-01]
gi|328918755|gb|AEB59586.1| hypothetical protein MDS_3555 [Pseudomonas mendocina NK-01]
Length = 312
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 111 GGSCGTCIVEIIDGK--DLLNERTNTELRYLKKKPESWRLACQTIV 154
GSC C+V +DG+ DLL E + K+ E WRLACQ V
Sbjct: 36 AGSCHACLVRCVDGEPLDLLPEALAAD-----KRAEGWRLACQCRV 76
>gi|288802921|ref|ZP_06408358.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella melaninogenica D18]
gi|288334738|gb|EFC73176.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella melaninogenica D18]
Length = 422
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGG GSCG C +++++G E ++E + +K + WRL CQ V
Sbjct: 69 CGGKGSCGQCKLQVVEGG---GEILDSERPHFSRKDVKDHWRLGCQCKV 114
>gi|149924465|ref|ZP_01912827.1| putative 2Fe-2S cluster assembly ferredoxin [Plesiocystis pacifica
SIR-1]
gi|149814668|gb|EDM74245.1| putative 2Fe-2S cluster assembly ferredoxin [Plesiocystis pacifica
SIR-1]
Length = 113
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 66 RAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK 125
R G DG VE A +G+ LL I ++ +++ + CGG +C +C I++G+
Sbjct: 7 RGGPDGERTVE---AKTGQNLLE-IAEEHDVKMGSA------CGGVCACSSCHCYILEGE 56
Query: 126 DLLNERTNTELRYLKK----KPESWRLACQTIVGNKE 158
D L+E ++ E L KP S RL CQ +G+++
Sbjct: 57 DSLDEPSDAEEDRLDMAFDVKPSS-RLGCQVKLGDED 92
>gi|392965629|ref|ZP_10331048.1| ferredoxin [Fibrisoma limi BUZ 3]
gi|387844693|emb|CCH53094.1| ferredoxin [Fibrisoma limi BUZ 3]
Length = 106
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 100 ATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES---WRLACQ 151
+ Y + CGG C TC V++++G D L + EL L P++ RL+CQ
Sbjct: 33 SDYNVLATCGGMALCATCHVQVLEGLDKLPPAQDAELDMLDTLPDADFDSRLSCQ 87
>gi|167762698|ref|ZP_02434825.1| hypothetical protein BACSTE_01056 [Bacteroides stercoris ATCC
43183]
gi|167699038|gb|EDS15617.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides stercoris
ATCC 43183]
Length = 438
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + +K + WRL CQ V
Sbjct: 84 CGGKGSCGQCKCQVVEGG---GEILPSEIPHFSRKQVQDHWRLGCQVKV 129
>gi|428218405|ref|YP_007102870.1| adenylate/guanylate cyclase [Pseudanabaena sp. PCC 7367]
gi|427990187|gb|AFY70442.1| adenylate/guanylate cyclase [Pseudanabaena sp. PCC 7367]
Length = 360
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 98 LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK---PESWRLACQT 152
LYA + CGG C TC V I DG + + T E + L KK P+ RLACQT
Sbjct: 26 LYADIPHMHVCGGFARCSTCRVLIADGVEACSPPTVHE-QILAKKLDLPDHIRLACQT 82
>gi|302346255|ref|YP_003814553.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
melaninogenica ATCC 25845]
gi|302151124|gb|ADK97385.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
melaninogenica ATCC 25845]
Length = 422
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGG GSCG C +++++G E ++E + +K + WRL CQ V
Sbjct: 69 CGGKGSCGQCKLQVVEGG---GEILDSERPHFSRKDVKDHWRLGCQCKV 114
>gi|254504666|ref|ZP_05116817.1| Adenylate and Guanylate cyclase catalytic domain protein [Labrenzia
alexandrii DFL-11]
gi|222440737|gb|EEE47416.1| Adenylate and Guanylate cyclase catalytic domain protein [Labrenzia
alexandrii DFL-11]
Length = 528
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQ 151
CGG C TC V++++G D L++ E LK+ PE RLACQ
Sbjct: 245 CGGRARCSTCRVKVLNGLDSLSQPNPAETTVLKRIGVPEDVRLACQ 290
>gi|153806720|ref|ZP_01959388.1| hypothetical protein BACCAC_00991 [Bacteroides caccae ATCC 43185]
gi|423218153|ref|ZP_17204649.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides caccae CL03T12C61]
gi|149131397|gb|EDM22603.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides caccae ATCC
43185]
gi|392627656|gb|EIY21691.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides caccae CL03T12C61]
Length = 424
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 115
>gi|319779392|ref|YP_004130305.1| (2Fe-2S) ferredoxin [Taylorella equigenitalis MCE9]
gi|397661630|ref|YP_006502330.1| ferredoxin [Taylorella equigenitalis ATCC 35865]
gi|317109416|gb|ADU92162.1| Ferredoxin, 2Fe-2S [Taylorella equigenitalis MCE9]
gi|394349809|gb|AFN35723.1| ferredoxin [Taylorella equigenitalis ATCC 35865]
gi|399115024|emb|CCG17820.1| ferredoxin [Taylorella equigenitalis 14/56]
Length = 111
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 113 SCGTCIVEIIDGKDLLNERTNTELRYLKK----KPESWRLACQTIVGNKE 158
+C TC V +++G + LNE T+ E L K KP S RL+CQ +VG+++
Sbjct: 48 ACTTCHVYVVEGFESLNESTDDEEDMLDKAWGLKPNS-RLSCQVVVGDED 96
>gi|294646743|ref|ZP_06724366.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD CC
2a]
gi|294807727|ref|ZP_06766520.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides
xylanisolvens SD CC 1b]
gi|292637903|gb|EFF56298.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD CC
2a]
gi|294445163|gb|EFG13837.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides
xylanisolvens SD CC 1b]
Length = 422
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 68 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 113
>gi|333030251|ref|ZP_08458312.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides coprosuis
DSM 18011]
gi|332740848|gb|EGJ71330.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides coprosuis
DSM 18011]
Length = 416
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES--WRLACQTIV 154
CGG GSCG C ++++G E TE + +K ++ WRL CQ V
Sbjct: 71 CGGKGSCGQCTCQVLEGG---GEILPTEKVHFSRKEQNAKWRLGCQVKV 116
>gi|237721017|ref|ZP_04551498.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298484226|ref|ZP_07002391.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D22]
gi|299145401|ref|ZP_07038469.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_23]
gi|336405372|ref|ZP_08586051.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_30]
gi|423213332|ref|ZP_17199861.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides xylanisolvens CL03T12C04]
gi|229449852|gb|EEO55643.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|295084404|emb|CBK65927.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides xylanisolvens XB1A]
gi|298269639|gb|EFI11235.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D22]
gi|298515892|gb|EFI39773.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_23]
gi|335937953|gb|EGM99847.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_30]
gi|392693792|gb|EIY87022.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides xylanisolvens CL03T12C04]
Length = 424
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 115
>gi|262407908|ref|ZP_06084456.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_22]
gi|293373021|ref|ZP_06619390.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD
CMC 3f]
gi|336416350|ref|ZP_08596685.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus 3_8_47FAA]
gi|345511614|ref|ZP_08791154.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D1]
gi|229443951|gb|EEO49742.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D1]
gi|262354716|gb|EEZ03808.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 2_1_22]
gi|292632089|gb|EFF50698.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus SD
CMC 3f]
gi|335938767|gb|EGN00651.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus 3_8_47FAA]
Length = 424
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 115
>gi|380695173|ref|ZP_09860032.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
faecis MAJ27]
gi|380695202|ref|ZP_09860061.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
faecis MAJ27]
Length = 424
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 115
>gi|298387705|ref|ZP_06997256.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_14]
gi|383122751|ref|ZP_09943441.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_6]
gi|251842146|gb|EES70226.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_6]
gi|298259561|gb|EFI02434.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 1_1_14]
Length = 424
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 115
>gi|392413734|ref|YP_006450341.1| putative metal-binding protein [Desulfomonile tiedjei DSM 6799]
gi|390626870|gb|AFM28077.1| putative metal-binding protein [Desulfomonile tiedjei DSM 6799]
Length = 615
Score = 38.1 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 104 KVMN--CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
K+M CGG G CG C + +++G +NE T +E + L + RLACQT V
Sbjct: 35 KIMTAPCGGRGQCGRCRIRLLEGT--VNEPTESETKLLSADELNQGVRLACQTEV 87
>gi|383811089|ref|ZP_09966565.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. oral
taxon 306 str. F0472]
gi|383356277|gb|EID33785.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella sp. oral
taxon 306 str. F0472]
Length = 422
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C +++++G E ++E + +K + WRL CQ V
Sbjct: 69 CGGKGSCGQCKLQVVEGG---GEILDSERPHFSRKEVKDHWRLGCQCKV 114
>gi|319902432|ref|YP_004162160.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides helcogenes P
36-108]
gi|319417463|gb|ADV44574.1| NADH:ubiquinone oxidoreductase, subunit F [Bacteroides helcogenes P
36-108]
Length = 422
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 68 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQKDHWRLGCQVKV 113
>gi|160886019|ref|ZP_02067022.1| hypothetical protein BACOVA_04025 [Bacteroides ovatus ATCC 8483]
gi|423286989|ref|ZP_17265840.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL02T12C04]
gi|423297991|ref|ZP_17276051.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL03T12C18]
gi|156108832|gb|EDO10577.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides ovatus ATCC
8483]
gi|392664628|gb|EIY58166.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL03T12C18]
gi|392673821|gb|EIY67276.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides ovatus CL02T12C04]
Length = 424
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 115
>gi|29346565|ref|NP_810068.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
thetaiotaomicron VPI-5482]
gi|29338461|gb|AAO76262.1| Na+-translocating NADH-quinone reductase subunit [Bacteroides
thetaiotaomicron VPI-5482]
Length = 422
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E+ + K++ + WRL CQ V
Sbjct: 68 CGGKGSCGQCKCQVLEGG---GEILPSEVPHFSRKQQQDHWRLGCQVKV 113
>gi|341898761|gb|EGT54696.1| hypothetical protein CAEBREN_03025 [Caenorhabditis brenneri]
Length = 430
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 21/143 (14%)
Query: 7 FSANQVSTQPPELCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPEKP---EIELEFI 63
++ NQ T P E RRSS KS S R P + PS+ EP K +IEL
Sbjct: 19 WTTNQEDTPPAETTSRRSSRKSTKSRKRSPS------SGAAPSTSEPRKKARRKIELIIT 72
Query: 64 AP------RAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTC 117
P G+ G YPV + + L+ ML N +Y V +
Sbjct: 73 PPTKPRQLHFGEKGYYPVTDGQVLENRYELQK-MLGN-----GSYATVHLAKDRQTQSAV 126
Query: 118 IVEIIDGKDLLNERTNTELRYLK 140
++I+ +L N ++ E+ ++K
Sbjct: 127 AIKIVRTGELYNIASDLEIGFMK 149
>gi|237747550|ref|ZP_04578030.1| ferredoxin protein [Oxalobacter formigenes OXCC13]
gi|229378912|gb|EEO29003.1| ferredoxin protein [Oxalobacter formigenes OXCC13]
Length = 111
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 89 NIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW-- 146
+ +LDN IE+ CG G+C TC V + G D L+E + E L + +W
Sbjct: 29 DALLDNHIEIEHA------CGKCGACSTCHVIVKKGYDSLSEMSEKEEDMLDR---AWGL 79
Query: 147 ----RLACQTIVGNKENSGKVCSRTMFLLN 172
RL+CQ VG+++ + ++ T+ L++
Sbjct: 80 TAESRLSCQAKVGDEDLTVEIPKYTINLVS 109
>gi|110833898|ref|YP_692757.1| Na(+)-translocating NADH-quinone reductase subunit F [Alcanivorax
borkumensis SK2]
gi|110647009|emb|CAL16485.1| sodium-translocating NADH-ubiquinone reductase,subunit F
[Alcanivorax borkumensis SK2]
Length = 409
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID-GKDLL---- 128
P + +A +G KLL + D I L + CGGGG+C C +++D G D+L
Sbjct: 44 PDKSIEAPAGGKLL-GTLADQGIFLSSA------CGGGGTCAQCRCQVLDGGGDILPTEE 96
Query: 129 NERTNTELRYLKKKPESWRLACQTIV 154
T ++R + WRL+CQ V
Sbjct: 97 GHFTKGQIR------DGWRLSCQVNV 116
>gi|254480666|ref|ZP_05093913.1| NADH:ubiquinone oxidoreductase, F subunit [marine gamma
proteobacterium HTCC2148]
gi|214039249|gb|EEB79909.1| NADH:ubiquinone oxidoreductase, F subunit [marine gamma
proteobacterium HTCC2148]
Length = 407
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGGGG+C C I DG TE + K+ E WRL+CQT V
Sbjct: 69 CGGGGTCAQCKCIINDGG---GSMLPTEEGHFTKRDAAEGWRLSCQTAV 114
>gi|299469804|emb|CBN76658.1| ferredoxin [Ectocarpus siliculosus]
Length = 159
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 81 ISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYL- 139
++G+ LR ++DNKI++Y GK+ NCGGGGSCGTC V + G + + E + L
Sbjct: 74 LAGKTNLRKALMDNKIDIYPLQGKIYNCGGGGSCGTCAVNVKAGAQNCSPKGPGEKKLLD 133
Query: 140 -KKKPESWRLACQTIV 154
K+P S+RL+C T+V
Sbjct: 134 KNKRPASYRLSCCTMV 149
>gi|83815978|ref|YP_444879.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Salinibacter ruber DSM 13855]
gi|83757372|gb|ABC45485.1| 2Fe-2S iron-sulfur cluster binding domain protein [Salinibacter
ruber DSM 13855]
Length = 206
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + + + + NCGG G CG C+VEI++G + ++ L +
Sbjct: 135 LRQALRRHGHSPHNAVTDIANCGGRGHCGLCVVEIVEGAPPPTQALDSTLSGMGVG---- 190
Query: 147 RLACQTIVGN 156
RL+C V +
Sbjct: 191 RLSCLVTVDH 200
>gi|422643968|ref|ZP_16707107.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330957521|gb|EGH57781.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 113
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
+ +I ++ IE+ + CGG +C TC I +G D LNE E L K +W
Sbjct: 27 ILDIAHEHHIEIESA------CGGVCACTTCHCVIREGFDSLNEADELEEDMLDK---AW 77
Query: 147 ------RLACQTIVGNKE 158
RL+CQ IVG ++
Sbjct: 78 GLEAQSRLSCQAIVGTED 95
>gi|371775771|ref|ZP_09482093.1| Na(+)-translocating NADH-quinone reductase subunit F [Anaerophaga
sp. HS1]
Length = 419
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLK 140
SG+ LL + +NKI L + CGGGG+C C ++ +G +L T R K
Sbjct: 57 SGQTLL-TALGNNKIFLPSA------CGGGGTCAMCRCQVHEGAGSILPTETGHFTR--K 107
Query: 141 KKPESWRLACQTIV 154
++ + WRLACQ V
Sbjct: 108 EQMQDWRLACQVKV 121
>gi|259419132|ref|ZP_05743049.1| adenylate/guanylate cyclase [Silicibacter sp. TrichCH4B]
gi|259345354|gb|EEW57208.1| adenylate/guanylate cyclase [Silicibacter sp. TrichCH4B]
Length = 560
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK--KKPESWRLACQ 151
CGG G C TC V ++ G D L E R L K P++ RLACQ
Sbjct: 289 CGGKGRCTTCRVMVLAGGDELPPPNAAEARSLAAIKAPDNMRLACQ 334
>gi|291280285|ref|YP_003497120.1| Na(+)-translocating NADH-quinone reductase subunit F [Deferribacter
desulfuricans SSM1]
gi|290754987|dbj|BAI81364.1| Na(+)-translocating NADH-quinone reductase subunit F [Deferribacter
desulfuricans SSM1]
Length = 407
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 7/52 (13%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKP--ESWRLACQTIVGN 156
CGG G+CG C V++++ G D+L TEL ++ K+ E RL+CQ V N
Sbjct: 69 CGGQGTCGLCKVKVLEGGGDIL----PTELSHISKREEKEGVRLSCQVTVKN 116
>gi|448624490|ref|ZP_21670438.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax denitrificans ATCC 35960]
gi|445749695|gb|EMA01137.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax denitrificans ATCC 35960]
Length = 125
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK 125
+LR+ +LD + YA K +NCGG G C TC V + G+
Sbjct: 43 VLRDALLDAGLSPYARLTKRVNCGGRGLCATCGVRVRSGE 82
>gi|323446318|gb|EGB02524.1| hypothetical protein AURANDRAFT_68800 [Aureococcus anophagefferens]
Length = 206
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTC 117
LR +L +K +Y+ G +MNC GGG CG C
Sbjct: 175 LRAALLGDKQAVYSFQGTLMNCNGGGQCGLC 205
>gi|448407065|ref|ZP_21573492.1| (2Fe-2S)-binding protein [Halosimplex carlsbadense 2-9-1]
gi|445676278|gb|ELZ28801.1| (2Fe-2S)-binding protein [Halosimplex carlsbadense 2-9-1]
Length = 129
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
+LR+++L+ + + Y + +NCGG G C TC V + + D + + R+
Sbjct: 32 VLRDVLLEAGLSPHGRYARRVNCGGRGLCATCGVRLAEPPDPDHWHDDLADRFGYP---- 87
Query: 146 WRLACQTIV 154
RL+CQ V
Sbjct: 88 -RLSCQLRV 95
>gi|332876778|ref|ZP_08444536.1| NADH:ubiquinone oxidoreductase, F subunit [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|357047378|ref|ZP_09108985.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella clara YIT
11840]
gi|332685337|gb|EGJ58176.1| NADH:ubiquinone oxidoreductase, F subunit [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|355529979|gb|EHG99404.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella clara YIT
11840]
Length = 422
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQ 151
CGG GSCG C ++++ G ++L+ R K+ + WRL CQ
Sbjct: 70 CGGKGSCGQCKCQVVEGGGEILDSEKGQFTR--KQIKDHWRLGCQ 112
>gi|448411041|ref|ZP_21575583.1| hypothetical protein C475_14673 [Halosimplex carlsbadense 2-9-1]
gi|445670930|gb|ELZ23526.1| hypothetical protein C475_14673 [Halosimplex carlsbadense 2-9-1]
Length = 113
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE 144
+LR ++LD + + K +NC G G+CGTC V + R L +
Sbjct: 17 DILREVLLDAGVVPHNGNAKRVNCRGHGTCGTCAVAVDGPTSAPTARERWRLDFPPHDAG 76
Query: 145 S-WRLACQTIV 154
+ RLACQT V
Sbjct: 77 TGLRLACQTRV 87
>gi|260427126|ref|ZP_05781105.1| ferredoxin [Citreicella sp. SE45]
gi|260421618|gb|EEX14869.1| ferredoxin [Citreicella sp. SE45]
Length = 95
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 88 RNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPES 145
R I + KI TYG G CGTC+ +++G + L+E + ELR LK+ +
Sbjct: 22 RIIEISEKIGAGITYGCRK-----GDCGTCLARVLEGAENLSEPSALELRVLKENLAGHN 76
Query: 146 WRLACQTIV 154
RLACQ V
Sbjct: 77 DRLACQCQV 85
>gi|330995712|ref|ZP_08319610.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella
xylaniphila YIT 11841]
gi|329574771|gb|EGG56332.1| NADH:ubiquinone oxidoreductase, F subunit [Paraprevotella
xylaniphila YIT 11841]
Length = 422
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQ 151
CGG GSCG C ++++ G ++L+ R K+ + WRL CQ
Sbjct: 70 CGGKGSCGQCKCQVVEGGGEILDSEKGQFTR--KQIKDHWRLGCQ 112
>gi|448604598|ref|ZP_21657765.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sulfurifontis ATCC BAA-897]
gi|445744007|gb|ELZ95487.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax sulfurifontis ATCC BAA-897]
Length = 125
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK 125
+LR+ +LD + YA K +NCGG G C TC V + G+
Sbjct: 43 VLRDALLDAGLSPYARLTKRVNCGGRGLCATCGVRVRSGE 82
>gi|206603447|gb|EDZ39927.1| Ferredoxin [Leptospirillum sp. Group II '5-way CG']
Length = 109
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK---PESWRLACQTIVGNKE 158
CGG +CGTC + + +G D L R N + +L K + RL CQT +G+ +
Sbjct: 36 CGGNAACGTCTIVVKEGADSLKPR-NAKESFLAKAMMLGDDQRLGCQTEMGSGD 88
>gi|346224059|ref|ZP_08845201.1| Na(+)-translocating NADH-quinone reductase subunit F [Anaerophaga
thermohalophila DSM 12881]
Length = 419
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGGGG+C C ++ +G + TE Y K++ + WRLACQ V
Sbjct: 76 CGGGGTCAMCRCQVHEGAGSI---LPTETGYFTRKEQMQDWRLACQVKV 121
>gi|149376576|ref|ZP_01894336.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
algicola DG893]
gi|149359094|gb|EDM47558.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
algicola DG893]
Length = 408
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C ++++G + T ++K E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVLEGGGAMLPTEKTHFTNREEK-EGWRLSCQVPV 116
>gi|419953540|ref|ZP_14469684.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri TS44]
gi|387969600|gb|EIK53881.1| Na(+)-translocating NADH-quinone reductase subunit F [Pseudomonas
stutzeri TS44]
Length = 407
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + N I L + CGGGG+C CIV+ G+ L E ++ R
Sbjct: 50 AGGKLLQTLA-SNNIFLSSA------CGGGGTCAQCKCIVQSGGGEMLPTEESHFTRR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQT V
Sbjct: 101 -EAGEGWRLSCQTPV 114
>gi|307354687|ref|YP_003895738.1| ferredoxin [Methanoplanus petrolearius DSM 11571]
gi|307157920|gb|ADN37300.1| ferredoxin [Methanoplanus petrolearius DSM 11571]
Length = 612
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQT 152
+CGG G CG C V+I+ +++ T E +LK +RLACQT
Sbjct: 40 DCGGAGVCGKCRVQIVKLYGEVSDPTEKERDHLKDGEIAAGYRLACQT 87
>gi|126664944|ref|ZP_01735927.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. ELB17]
gi|126630314|gb|EBA00929.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. ELB17]
Length = 408
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C ++ +G L E+T+ R ++ E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVFEGGGAMLATEKTHFTNR---EEKEGWRLSCQVPV 116
>gi|399544109|ref|YP_006557417.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. BSs20148]
gi|399159441|gb|AFP30004.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
sp. BSs20148]
Length = 408
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C ++ +G L E+T+ R ++ E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVFEGGGAMLATEKTHFTNR---EEKEGWRLSCQVPV 116
>gi|358450753|ref|ZP_09161204.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
manganoxydans MnI7-9]
gi|357225049|gb|EHJ03563.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
manganoxydans MnI7-9]
Length = 408
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C ++++G + T ++K E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVLEGGGAMLPTEKTHFTNREEK-EGWRLSCQVPV 116
>gi|163761519|ref|ZP_02168591.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
gi|162281233|gb|EDQ31532.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
Length = 616
Score = 37.7 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK--KKPESWRLACQ 151
CGG G C TC V+II+ E R L+ + PE+ RLACQ
Sbjct: 319 CGGRGRCSTCRVQIIETAVPTTPPLEAESRVLERIRAPENVRLACQ 364
>gi|385331989|ref|YP_005885940.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
adhaerens HP15]
gi|311695139|gb|ADP98012.1| Na(+)-translocating NADH-quinone reductase subunit F [Marinobacter
adhaerens HP15]
Length = 408
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C ++++G + T ++K E WRL+CQ V
Sbjct: 71 CGGGGTCAQCKCKVLEGGGAMLPTEKTHFTNREEK-EGWRLSCQVPV 116
>gi|119357530|ref|YP_912174.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
gi|119354879|gb|ABL65750.1| ferredoxin [Chlorobium phaeobacteroides DSM 266]
Length = 355
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGNKENSGKVCS 165
C G G C C V + +G D L+ ++ E +L ++ + RLACQ ++ ++ KV S
Sbjct: 33 CAGQGICQACYVTVQEGADSLSPLSDVEKAFLSDRQIAKGGRLACQAVI-ERDGVVKVLS 91
Query: 166 R 166
R
Sbjct: 92 R 92
>gi|323345197|ref|ZP_08085420.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
oralis ATCC 33269]
gi|323093311|gb|EFZ35889.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
oralis ATCC 33269]
Length = 422
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV-GNKE 158
CGG SCG C V+++ G L +ER + + +K + WRL CQ V GN E
Sbjct: 69 CGGKASCGQCKVQVLQGGGEILDSERPHFSRKQIK---DHWRLGCQCKVKGNLE 119
>gi|359464285|ref|ZP_09252848.1| Fe-S cluster-binding ferredoxin [Acaryochloris sp. CCMEE 5410]
Length = 157
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133
P+E +I L ++L K+++ CGG G C TC + I G++ L+ ++
Sbjct: 9 PIESQASIKTNDHLLAVLLQEKLDVQ------WKCGGRGRCATCHIYIQSGEESLSPKSK 62
Query: 134 TELRYLK---KKPESWRLACQ 151
E++ L+ E+ RLACQ
Sbjct: 63 REVKTLELISNSQENSRLACQ 83
>gi|359784787|ref|ZP_09287953.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
GFAJ-1]
gi|359297932|gb|EHK62154.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
GFAJ-1]
Length = 410
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCI--VEIIDGKDLLNERTNTELRYL 139
+G KLL N + N I L + CGGGGSC C VE G L E ++ +R
Sbjct: 54 AGGKLL-NTLAANGIFLSSA------CGGGGSCAQCKCRVEEGGGSILPTEESHFTMR-- 104
Query: 140 KKKPESWRLACQTIV 154
+K + WRL+CQ V
Sbjct: 105 -EKKDGWRLSCQVPV 118
>gi|410858394|ref|YP_006974334.1| ferredoxin, root r-b2 [Chlamydia psittaci 01DC12]
gi|410811289|emb|CCO01935.1| ferredoxin, root r-b2 [Chlamydia psittaci 01DC12]
Length = 91
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQ 151
G CGTC++E+++GK+ L+ T E +L +S RLACQ
Sbjct: 39 GVCGTCVIEVVEGKENLSNFTEEEKDFLGDCEDSNERLACQ 79
>gi|383620744|ref|ZP_09947150.1| ferredoxin I 5 [Halobiforma lacisalsi AJ5]
gi|448698335|ref|ZP_21698974.1| ferredoxin I 5 [Halobiforma lacisalsi AJ5]
gi|445780954|gb|EMA31824.1| ferredoxin I 5 [Halobiforma lacisalsi AJ5]
Length = 117
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
LR +L++ + +Y T + NCGG G C TC VE+ + + +R+
Sbjct: 28 LRESLLEHGLPVYGTVSQYANCGGRGLCSTCTVEVDPAPEPTHWHDAAAVRF 79
>gi|329942778|ref|ZP_08291557.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydophila
psittaci Cal10]
gi|332287371|ref|YP_004422272.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|384450523|ref|YP_005663123.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|384451525|ref|YP_005664123.1| ferredoxin [Chlamydophila psittaci 01DC11]
gi|384452498|ref|YP_005665095.1| ferredoxin [Chlamydophila psittaci 08DC60]
gi|384453474|ref|YP_005666070.1| ferredoxin [Chlamydophila psittaci C19/98]
gi|384454453|ref|YP_005667048.1| ferredoxin [Chlamydophila psittaci 02DC15]
gi|392376610|ref|YP_004064388.1| ferredoxin, root r-b2 [Chlamydophila psittaci RD1]
gi|406592283|ref|YP_006739463.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci CP3]
gi|406593373|ref|YP_006740552.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci NJ1]
gi|406594250|ref|YP_006741588.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci MN]
gi|407453957|ref|YP_006733065.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci 84/55]
gi|407455267|ref|YP_006734158.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci GR9]
gi|407456650|ref|YP_006735223.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci VS225]
gi|407458001|ref|YP_006736306.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci WS/RT/E30]
gi|407459242|ref|YP_006737345.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci M56]
gi|407460618|ref|YP_006738393.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Chlamydia psittaci WC]
gi|449071081|ref|YP_007438161.1| ferredoxin, root r-b2 [Chlamydophila psittaci Mat116]
gi|313847953|emb|CBY16949.1| ferredoxin, root r-b2 [Chlamydophila psittaci RD1]
gi|325507051|gb|ADZ18689.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|328815038|gb|EGF85027.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydophila
psittaci Cal10]
gi|328914617|gb|AEB55450.1| ferredoxin [Chlamydophila psittaci 6BC]
gi|334692255|gb|AEG85474.1| ferredoxin [Chlamydophila psittaci C19/98]
gi|334693235|gb|AEG86453.1| ferredoxin [Chlamydophila psittaci 01DC11]
gi|334694210|gb|AEG87427.1| ferredoxin [Chlamydophila psittaci 02DC15]
gi|334695187|gb|AEG88403.1| ferredoxin [Chlamydophila psittaci 08DC60]
gi|405780716|gb|AFS19466.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci 84/55]
gi|405781810|gb|AFS20559.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci GR9]
gi|405782682|gb|AFS21430.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci MN]
gi|405783911|gb|AFS22658.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci VS225]
gi|405785250|gb|AFS23996.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci WS/RT/E30]
gi|405785679|gb|AFS24424.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci M56]
gi|405787615|gb|AFS26359.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci WC]
gi|405788155|gb|AFS26898.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci CP3]
gi|405789245|gb|AFS27987.1| 2Fe-2S iron-sulfur cluster binding domain protein [Chlamydia
psittaci NJ1]
gi|449039589|gb|AGE75013.1| ferredoxin, root r-b2 [Chlamydophila psittaci Mat116]
Length = 91
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQ 151
G CGTC++E+++GK+ L+ T E +L +S RLACQ
Sbjct: 39 GVCGTCVIEVVEGKENLSNFTEEEKDFLGDCEDSNERLACQ 79
>gi|86136499|ref|ZP_01055078.1| adenylate/guanylate cyclase [Roseobacter sp. MED193]
gi|85827373|gb|EAQ47569.1| adenylate/guanylate cyclase [Roseobacter sp. MED193]
Length = 563
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK--KKPESWRLACQT 152
CGG G C TC +E+ G + L ++ E R LK K E+ RLACQ
Sbjct: 279 CGGKGRCTTCRIEVTKGLENLAPPSSAEARTLKAIKARENVRLACQV 325
>gi|289626159|ref|ZP_06459113.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aesculi str. NCPPB 3681]
gi|289649065|ref|ZP_06480408.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aesculi str. 2250]
gi|422584775|ref|ZP_16659876.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|298159494|gb|EFI00541.1| Ferredoxin, 2Fe-2S [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330869583|gb|EGH04292.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 113
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------RLACQTIVGNKE 158
CGG +C TC I +G + LNE E L K +W RL+CQ IVGN++
Sbjct: 42 CGGVCACTTCHCVIREGFNSLNEADELEEDMLDK---AWGLEAQSRLSCQAIVGNED 95
>gi|340353581|ref|ZP_08676393.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
pallens ATCC 700821]
gi|339609399|gb|EGQ14273.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
pallens ATCC 700821]
Length = 422
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++++G L +ER + + +K + WRL CQ V
Sbjct: 69 CGGKGSCGQCKCQVLEGGGEILDSERPHFSRKEIK---DHWRLGCQAKV 114
>gi|392384065|ref|YP_005033261.1| ferredoxin [Azospirillum brasilense Sp245]
gi|356880780|emb|CCD01744.1| ferredoxin [Azospirillum brasilense Sp245]
Length = 566
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLK--KKPESWRLACQ 151
CGG G C TC + + +G D L TE L+ K P + RLACQ
Sbjct: 290 CGGRGRCSTCRIRVTEGVDALPPPNATERAVLERMKAPRAVRLACQ 335
>gi|193214970|ref|YP_001996169.1| ferredoxin [Chloroherpeton thalassium ATCC 35110]
gi|193088447|gb|ACF13722.1| ferredoxin [Chloroherpeton thalassium ATCC 35110]
Length = 241
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRY--LKKKPESWRLACQTIV 154
CGG G C TC V + +G +LL+E E + KK + RLACQ V
Sbjct: 34 CGGNGLCQTCDVVVHEGGELLSEPNEVEKAWNPQKKLDDGHRLACQARV 82
>gi|429737806|ref|ZP_19271653.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
saccharolytica F0055]
gi|429161939|gb|EKY04304.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella
saccharolytica F0055]
Length = 422
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 108 CGGGGSCGTCIVEIID--GKDLLNERTNTELRYLKKKPESWRLACQ 151
CGG SCG C +++++ G+ L +ER++ + +K + WRL CQ
Sbjct: 69 CGGKASCGQCKLQVVEGGGEILDSERSHFTRKEIK---DHWRLGCQ 111
>gi|399911446|ref|ZP_10779760.1| Na(+)-translocating NADH-quinone reductase subunit F [Halomonas sp.
KM-1]
Length = 410
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCI--VEIIDGKDLLNERTNTELRYL 139
+G KLL N + N I L + CGGGGSC C VE G L E ++ +R
Sbjct: 54 AGGKLL-NTLAANGIFLSSA------CGGGGSCAQCKCRVEEGGGAILPTEESHFTMR-- 104
Query: 140 KKKPESWRLACQTIV 154
+K + WRL+CQ V
Sbjct: 105 -EKKDGWRLSCQVPV 118
>gi|78044449|ref|YP_360062.1| iron-sulfur cluster binding protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|383280344|pdb|3ZYY|X Chain X, Reductive Activator For Corrinoid,Iron-Sulfur Protein
gi|383280345|pdb|3ZYY|Y Chain Y, Reductive Activator For Corrinoid,Iron-Sulfur Protein
gi|77996564|gb|ABB15463.1| iron-sulfur cluster binding protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 631
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPE----SWRLACQT 152
CGG G+CG C+V ++DG+ +R + Y K K E + LACQT
Sbjct: 38 CGGAGTCGKCLVRVVDGQ----KRVES---YGKLKQEEIAQGYVLACQT 79
>gi|392394265|ref|YP_006430867.1| metal-binding protein [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525343|gb|AFM01074.1| putative metal-binding protein [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 610
Score = 37.4 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 73 YPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERT 132
+P ++ IS L + I+L +T CGG G+CG C V++ GK L+
Sbjct: 7 FPGKKTVEISEGTTLLETAIAAGIQLEST------CGGRGTCGKCKVQVEPGK--LDSHK 58
Query: 133 NTELRYL--KKKPESWRLACQTIV 154
+ ++L +K E W LAC+ V
Sbjct: 59 DYGNKFLSESEKEEGWVLACKVQV 82
>gi|363582938|ref|ZP_09315748.1| Na(+)-translocating NADH-quinone reductase subunit F
[Flavobacteriaceae bacterium HQM9]
Length = 435
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C ++++ G DLL R K+ E WRL CQ V
Sbjct: 75 CGGGGTCIQCKCQVLEGGGDLLPTEEPHFTR--KEAAEGWRLGCQVKV 120
>gi|288799900|ref|ZP_06405359.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. oral taxon 299 str. F0039]
gi|288333148|gb|EFC71627.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella sp. oral taxon 299 str. F0039]
Length = 423
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQ 151
CGG SCG C +++++G L +ER++ + +K ++WRL CQ
Sbjct: 70 CGGKASCGQCKLQVVEGGGEILDSERSHFTRKEIK---DNWRLGCQ 112
>gi|265753647|ref|ZP_06089002.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_33FAA]
gi|263235361|gb|EEZ20885.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 3_1_33FAA]
Length = 424
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++++ G ++L R K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVVEGGGEILPSEKGHFSR--KQQQDHWRLGCQVKV 115
>gi|422665479|ref|ZP_16725351.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330975897|gb|EGH75963.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 113
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK----KPESWRLACQTIVGNKE 158
CGG +C TC I +G + L+E E L K +P+S RL+CQ IVGN++
Sbjct: 42 CGGVCACTTCHCVIREGFNSLDEADELEEDMLDKAWGLEPQS-RLSCQAIVGNED 95
>gi|307566471|ref|ZP_07628903.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella amnii CRIS
21A-A]
gi|307344815|gb|EFN90220.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella amnii CRIS
21A-A]
Length = 421
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 23/92 (25%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQ-------------T 152
CGG SCG C ++I+G L +ER + + +K E+WRL CQ T
Sbjct: 68 CGGKASCGQCKCQVIEGGGEILDSERPHFSRKEIK---ENWRLGCQAKVKGDISIKIPET 124
Query: 153 IVGNKENSGKVCSRTMFLLNLLAFLQKEMRVT 184
++G KE +V S N+ +F+ KE +V
Sbjct: 125 VLGVKEWECEVISNK----NVSSFI-KEFKVA 151
>gi|423231423|ref|ZP_17217826.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T00C15]
gi|423246010|ref|ZP_17227083.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T12C06]
gi|392628309|gb|EIY22342.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T00C15]
gi|392637357|gb|EIY31230.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL02T12C06]
Length = 422
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++++ G ++L R K++ + WRL CQ V
Sbjct: 68 CGGKGSCGQCKCQVVEGGGEILPSEKGHFSR--KQQQDHWRLGCQVKV 113
>gi|212693253|ref|ZP_03301381.1| hypothetical protein BACDOR_02764 [Bacteroides dorei DSM 17855]
gi|237709996|ref|ZP_04540477.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
9_1_42FAA]
gi|345515394|ref|ZP_08794896.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei 5_1_36/D4]
gi|423238456|ref|ZP_17219572.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL03T12C01]
gi|212664204|gb|EEB24776.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides dorei DSM
17855]
gi|229436026|gb|EEO46103.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei 5_1_36/D4]
gi|229456089|gb|EEO61810.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
9_1_42FAA]
gi|392648139|gb|EIY41829.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides dorei CL03T12C01]
Length = 424
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++++ G ++L R K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVVEGGGEILPSEKGHFSR--KQQQDHWRLGCQVKV 115
>gi|209526318|ref|ZP_03274847.1| ferredoxin [Arthrospira maxima CS-328]
gi|376001484|ref|ZP_09779352.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|423062693|ref|ZP_17051483.1| ferredoxin [Arthrospira platensis C1]
gi|209493247|gb|EDZ93573.1| ferredoxin [Arthrospira maxima CS-328]
gi|375330093|emb|CCE15105.1| Ferredoxin (2Fe-2S) [Arthrospira sp. PCC 8005]
gi|406715649|gb|EKD10802.1| ferredoxin [Arthrospira platensis C1]
Length = 161
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLL---NERTNTELRYLKKKPESWRLACQTIV 154
CGG G C TC V I DG + L N R L + ++ RLACQ V
Sbjct: 37 CGGRGMCATCHVYIKDGMESLSPVNRREQRTLEVITTAQKTSRLACQAHV 86
>gi|150005746|ref|YP_001300490.1| Na(+)-translocating NADH-quinone reductase subunit F [Bacteroides
vulgatus ATCC 8482]
gi|294777225|ref|ZP_06742681.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides vulgatus
PC510]
gi|319640917|ref|ZP_07995626.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
3_1_40A]
gi|149934170|gb|ABR40868.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides
vulgatus ATCC 8482]
gi|294448939|gb|EFG17483.1| NADH:ubiquinone oxidoreductase, F subunit [Bacteroides vulgatus
PC510]
gi|317387436|gb|EFV68306.1| Na+-translocating NADH-quinone reductase subunit F [Bacteroides sp.
3_1_40A]
Length = 424
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++++ G ++L R K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVVEGGGEILPSEKGHFSR--KQQQDHWRLGCQVKV 115
>gi|268324483|emb|CBH38071.1| conserved hypothetical protein containing 2Fe-2S iron-sulfur
cluster binding domain [uncultured archaeon]
Length = 521
Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQT 152
CGG G CG C+VE+ L++ T E +++ ++ RLACQ
Sbjct: 35 CGGEGKCGQCLVEVEYATGALSDVTEAEKKFI--HDDTCRLACQA 77
>gi|453083723|gb|EMF11768.1| ferredoxin [Mycosphaerella populorum SO2202]
Length = 225
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 22/180 (12%)
Query: 8 SANQVSTQPPELCLRRSSFKSKLSSPRRPKFVSFAVNSTEPSSPEPEKPEIELEFIAPRA 67
S+ Q S R + K +S PRR F S + +P E ++ F+ +
Sbjct: 61 SSAQASHSATSCAFRPAPRKHIISPPRR-TFASSTIQRHGDITPPKPGEERKVTFV-DKE 118
Query: 68 GDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-- 125
G D ++ V G+ LL +I N +E+ CGG +C TC V + D
Sbjct: 119 GRDWTFEV-----ADGDNLL-DIAQANDLEMEGA------CGGSCACSTCHVIVADDAMY 166
Query: 126 DLLNERTNTELRYLKKK---PESWRLACQTIVGNKENSGKVCSRTMFLLNLLA--FLQKE 180
D + E ++ E L E+ RL CQ +V +KE G V NL A F +K+
Sbjct: 167 DKMEEPSDDENDMLDLAFGLTETSRLGCQ-VVMSKELDGLVVKLPSMTRNLQASDFAEKK 225
>gi|224367812|ref|YP_002601975.1| Na(+)-translocating NADH-quinone reductase subunit F
[Desulfobacterium autotrophicum HRM2]
gi|223690528|gb|ACN13811.1| NqrF [Desulfobacterium autotrophicum HRM2]
Length = 403
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGN 156
CGG GSCG C E+I G + TEL +L K+K RLACQ V N
Sbjct: 69 CGGSGSCGMCKCEVIKGGGSI---LPTELGHLSRKEKLAGKRLACQLKVKN 116
>gi|345519435|ref|ZP_08798858.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 4_3_47FAA]
gi|423314610|ref|ZP_17292543.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides vulgatus CL09T03C04]
gi|345457171|gb|EET15177.2| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. 4_3_47FAA]
gi|392681939|gb|EIY75294.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides vulgatus CL09T03C04]
Length = 422
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++++ G ++L R K++ + WRL CQ V
Sbjct: 68 CGGKGSCGQCKCQVVEGGGEILPSEKGHFSR--KQQQDHWRLGCQVKV 113
>gi|325857417|ref|ZP_08172472.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella denticola
CRIS 18C-A]
gi|327314253|ref|YP_004329690.1| NADH:ubiquinone oxidoreductase subunit F [Prevotella denticola
F0289]
gi|325483127|gb|EGC86107.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella denticola
CRIS 18C-A]
gi|326946336|gb|AEA22221.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella denticola
F0289]
Length = 422
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG SCG C V++++G L +ER + + +K + WRL CQ V
Sbjct: 69 CGGKASCGQCKVQVVEGGGEILDSERPHFSRKEIK---DHWRLGCQCKV 114
>gi|409991581|ref|ZP_11274830.1| ferredoxin [Arthrospira platensis str. Paraca]
gi|291567916|dbj|BAI90188.1| probable 2Fe-2S ferredoxin [Arthrospira platensis NIES-39]
gi|409937561|gb|EKN78976.1| ferredoxin [Arthrospira platensis str. Paraca]
Length = 161
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLL---NERTNTELRYLKKKPESWRLACQTIV 154
CGG G C TC V I DG + L N R L + ++ RLACQ V
Sbjct: 37 CGGRGMCATCHVYIKDGMESLSPVNRREQRTLEVITTAQKTSRLACQAQV 86
>gi|226364090|ref|YP_002781872.1| 2Fe-2S ferredoxin [Rhodococcus opacus B4]
gi|226242579|dbj|BAH52927.1| 2Fe-2S ferredoxin [Rhodococcus opacus B4]
Length = 106
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 103 GKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTE---LRYLKKKPESWRLACQTIVGNKE 158
G + CGG SC TC V + +G L +E T+ E L YL+ RL+CQ IV +
Sbjct: 35 GIIAECGGSCSCATCHVILDEGSTGLFDEATDEERDLLEYLEGVQSHSRLSCQLIVNGQC 94
Query: 159 NSGKV 163
+ +V
Sbjct: 95 DGVRV 99
>gi|225011509|ref|ZP_03701947.1| NADH:ubiquinone oxidoreductase, subunit F [Flavobacteria bacterium
MS024-2A]
gi|225004012|gb|EEG41984.1| NADH:ubiquinone oxidoreductase, subunit F [Flavobacteria bacterium
MS024-2A]
Length = 431
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGGGG+C C ++++G E TE + +K E WRL CQ V
Sbjct: 70 CGGGGTCIQCKCQVLEGG---GEILPTEAPHFSRKEVAEGWRLGCQVKV 115
>gi|422608860|ref|ZP_16680819.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv. mori
str. 301020]
gi|330894487|gb|EGH27148.1| ferredoxin, 2Fe-2S type, ISC system [Pseudomonas syringae pv. mori
str. 301020]
Length = 113
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW------RLACQTIVGNKE 158
CGG +C TC I +G + LNE E L K +W RL+CQ IVGN++
Sbjct: 42 CGGVCACTTCHCIIREGFNSLNEADELEEDMLDK---AWGLEAQSRLSCQAIVGNED 95
>gi|325270531|ref|ZP_08137131.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
multiformis DSM 16608]
gi|324987107|gb|EGC19090.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
multiformis DSM 16608]
Length = 422
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG SCG C V++++G L +ER + + +K + WRL CQ V
Sbjct: 69 CGGKASCGQCKVQVVEGGGEILDSERPHFSRKEIK---DHWRLGCQCKV 114
>gi|224370953|ref|YP_002605117.1| ferredoxin [Desulfobacterium autotrophicum HRM2]
gi|223693670|gb|ACN16953.1| ferredoxin (4Fe-4S iron-sulfur cluster binding protein)
[Desulfobacterium autotrophicum HRM2]
Length = 611
Score = 37.4 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQT 152
CGG GSCG C V +D ++ +++ TE++ L RLACQT
Sbjct: 37 CGGAGSCGACRVR-LDDQEHVSKPNETEIKVLDSDDLASGIRLACQT 82
>gi|163793955|ref|ZP_02187929.1| putative adenylate cyclase transmembrane protein [alpha
proteobacterium BAL199]
gi|159181066|gb|EDP65583.1| putative adenylate cyclase transmembrane protein [alpha
proteobacterium BAL199]
Length = 433
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQTIV 154
CGG G C TC + I + L E + E + L++ P + RLACQT+V
Sbjct: 162 CGGRGRCSTCRIRIGARLEALPEPSEAEAKVLRRIAAPPNVRLACQTVV 210
>gi|375147408|ref|YP_005009849.1| ferredoxin [Niastella koreensis GR20-10]
gi|361061454|gb|AEW00446.1| ferredoxin [Niastella koreensis GR20-10]
Length = 111
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 88 RNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE----LRYLKKKP 143
RN+M+ K +++ + CGG CGTC+VE+++ + L T+T+ +R +
Sbjct: 29 RNLMVLIKDQVWVD--GMGECGGQARCGTCMVELLNAGENLVVATDTKEAAVIRRMMTTQ 86
Query: 144 ESWRLACQTIVGNKENSGKV 163
RL+CQ +V N K+
Sbjct: 87 SIIRLSCQILVDETLNGLKI 106
>gi|357042875|ref|ZP_09104576.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella histicola F0411]
gi|355368940|gb|EHG16351.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella histicola F0411]
Length = 422
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG SCG C V++++G L +ER + + +K + WRL CQ V
Sbjct: 69 CGGKASCGQCKVQVVEGGGEILDSERPHFSRKEIK---DHWRLGCQCKV 114
>gi|418703129|ref|ZP_13264019.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410767193|gb|EKR37870.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Hebdomadis str. R499]
Length = 530
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLN--ERTNTELRYLKKKPESWRLACQTIV 154
CGG C TC V +++ L+ E+ EL K P+S RLACQT V
Sbjct: 35 CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKGFPKSVRLACQTTV 83
>gi|417763551|ref|ZP_12411528.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000624]
gi|417774029|ref|ZP_12421904.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000621]
gi|418675171|ref|ZP_13236463.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000623]
gi|409940370|gb|EKN86010.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000624]
gi|410576500|gb|EKQ39507.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000621]
gi|410577743|gb|EKQ45612.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. 2002000623]
Length = 530
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLN--ERTNTELRYLKKKPESWRLACQTIV 154
CGG C TC V +++ L+ E+ EL K P+S RLACQT V
Sbjct: 35 CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKGFPKSVRLACQTTV 83
>gi|434392926|ref|YP_007127873.1| ferredoxin [Gloeocapsa sp. PCC 7428]
gi|428264767|gb|AFZ30713.1| ferredoxin [Gloeocapsa sp. PCC 7428]
Length = 109
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR ++L N++ + ++NC G G+CGTC V + +N R P +
Sbjct: 19 LRQVLLQNEVNPHNGNATIINCRGIGTCGTCAVFVEGEVSEVNWRDKARRSLPPHDPTRN 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 LRLACQTQV 87
>gi|24213884|ref|NP_711365.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. 56601]
gi|45658348|ref|YP_002434.1| adenylate/guanylate cyclase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386073429|ref|YP_005987746.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. IPAV]
gi|417764899|ref|ZP_12412866.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|418667532|ref|ZP_13228943.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|418689760|ref|ZP_13250879.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. FPW2026]
gi|418714343|ref|ZP_13274903.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 08452]
gi|418727743|ref|ZP_13286331.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12621]
gi|421084886|ref|ZP_15545742.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. HAI1594]
gi|421103179|ref|ZP_15563779.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|421122552|ref|ZP_15582835.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. Brem 329]
gi|24194732|gb|AAN48383.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. 56601]
gi|45601591|gb|AAS71071.1| adenylate/guanylate cyclase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353457218|gb|AER01763.1| adenylate/guanylate cyclase [Leptospira interrogans serovar Lai
str. IPAV]
gi|400353343|gb|EJP05519.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400360949|gb|EJP16918.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. FPW2026]
gi|409959101|gb|EKO22878.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12621]
gi|410344452|gb|EKO95618.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. Brem 329]
gi|410366925|gb|EKP22313.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410432836|gb|EKP77191.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
santarosai str. HAI1594]
gi|410756703|gb|EKR18322.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410789286|gb|EKR82988.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 08452]
gi|455790224|gb|EMF42110.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456823161|gb|EMF71631.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Canicola str. LT1962]
gi|456989309|gb|EMG24121.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 530
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLN--ERTNTELRYLKKKPESWRLACQTIV 154
CGG C TC V +++ L+ E+ EL K P+S RLACQT V
Sbjct: 35 CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKGFPKSVRLACQTTV 83
>gi|260590948|ref|ZP_05856406.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella veroralis F0319]
gi|260536813|gb|EEX19430.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella veroralis F0319]
Length = 422
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQ 151
CGG SCG C V++++G L +ER + + +K + WRL CQ
Sbjct: 69 CGGKASCGQCKVQVVEGGGEILDSERPHFSRKEIK---DHWRLGCQ 111
>gi|417769967|ref|ZP_12417881.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|418680324|ref|ZP_13241574.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418700303|ref|ZP_13261245.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418732639|ref|ZP_13290366.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12758]
gi|421114941|ref|ZP_15575355.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|421127525|ref|ZP_15587749.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421134137|ref|ZP_15594279.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|400328038|gb|EJO80277.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409948220|gb|EKN98210.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Pomona]
gi|410013662|gb|EKO71739.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410021875|gb|EKO88658.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410435615|gb|EKP84747.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410760204|gb|EKR26400.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410773419|gb|EKR53447.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. UI 12758]
gi|455670009|gb|EMF35063.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Pomona str. Fox 32256]
Length = 530
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLN--ERTNTELRYLKKKPESWRLACQTIV 154
CGG C TC V +++ L+ E+ EL K P+S RLACQT V
Sbjct: 35 CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKGFPKSVRLACQTTV 83
>gi|194336786|ref|YP_002018580.1| ferredoxin [Pelodictyon phaeoclathratiforme BU-1]
gi|194309263|gb|ACF43963.1| ferredoxin [Pelodictyon phaeoclathratiforme BU-1]
Length = 349
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENSGKVCS 165
CGG G C C V + +G + L+ T E +L ++ RLACQ + KE + K+ S
Sbjct: 33 CGGHGVCQACYVTVQEGGECLSPLTEIENAFLSERQIQSGGRLACQATI-EKEGTLKLLS 91
Query: 166 R 166
R
Sbjct: 92 R 92
>gi|417785851|ref|ZP_12433553.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. C10069]
gi|418709690|ref|ZP_13270476.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|409951192|gb|EKO05709.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans str. C10069]
gi|410769925|gb|EKR45152.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
Length = 530
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLN--ERTNTELRYLKKKPESWRLACQTIV 154
CGG C TC V +++ L+ E+ EL K P+S RLACQT V
Sbjct: 35 CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKGFPKSVRLACQTTV 83
>gi|387131695|ref|YP_006297668.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella intermedia
17]
gi|386374543|gb|AFJ07695.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella intermedia
17]
Length = 422
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG GSCG C ++++G E ++E + +K + WRL CQ V
Sbjct: 69 CGGKGSCGQCKCQVLEGG---GEILDSERPHFSRKEVKDHWRLGCQAKV 114
>gi|383112862|ref|ZP_09933647.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D2]
gi|313692747|gb|EFS29582.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Bacteroides sp. D2]
Length = 424
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGG GSCG C ++++G E +E + K++ + WRL CQ V
Sbjct: 70 CGGKGSCGQCKCQVLEGG---GEILPSEAPHFSRKQQQDHWRLGCQVKV 115
>gi|22299845|ref|NP_683092.1| ferredoxin [Thermosynechococcus elongatus BP-1]
gi|22296029|dbj|BAC09854.1| tlr2302 [Thermosynechococcus elongatus BP-1]
Length = 160
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLL---NE 130
P+ R ++ L + +LD+++ + + CGG G C TC V I +G + L N+
Sbjct: 9 PISRETTVNTNDNLLSALLDSELHV------LKECGGRGMCATCHVYIKEGMESLSPINK 62
Query: 131 RTNTELRYLKKKPESWRLACQ 151
R L + + RLACQ
Sbjct: 63 REQRTLEVITTANATSRLACQ 83
>gi|305664004|ref|YP_003860292.1| ferredoxin [Ignisphaera aggregans DSM 17230]
gi|304378573|gb|ADM28412.1| ferredoxin [Ignisphaera aggregans DSM 17230]
Length = 611
Score = 37.0 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQ 151
CGG G CG C V I++G+ L+ T E++ L K + +RLACQ
Sbjct: 34 CGGIGICGKCKV-IVEGRGELSPPTPNEIKILGDKGISQGYRLACQ 78
>gi|456968653|gb|EMG09823.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 530
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLN--ERTNTELRYLKKKPESWRLACQTIV 154
CGG C TC V +++ L+ E+ EL K P+S RLACQT V
Sbjct: 35 CGGNARCSTCRVLVLENPSHLSPPEQKEKELSQKKGFPKSVRLACQTTV 83
>gi|398827292|ref|ZP_10585505.1| family 3 adenylate cyclase [Phyllobacterium sp. YR531]
gi|398219755|gb|EJN06219.1| family 3 adenylate cyclase [Phyllobacterium sp. YR531]
Length = 543
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTE---LRYLKKKPESWRLACQ 151
CGG G C TC V++++G D L TE L + P+ RLACQ
Sbjct: 274 CGGKGRCSTCRVQVVEGGDTLLRPDATEQATLNRINADPDV-RLACQ 319
>gi|442770320|gb|AGC71039.1| iron-sulfur cluster-binding protein [uncultured bacterium
A1Q1_fos_1231]
Length = 167
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 106 MNCGGGGSCGTCIVEIIDGKDLLNERTNTE---LRYLKKKPESWRLACQTIV 154
M CGG G C TC V +++G D L+ T E L L + + RLACQ V
Sbjct: 34 MACGGKGLCATCHVYVMEGSDKLSPITPREKLALPMLAELQPNSRLACQAKV 85
>gi|386286622|ref|ZP_10063810.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium BDW918]
gi|385280419|gb|EIF44343.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium BDW918]
Length = 407
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 81 ISGEKLLRNIMLDNKIELYATYGKVMN--CGGGGSCGT--CIVEIIDGKDLLNERTNTEL 136
I+GEK + D + + G + CGGGGSC CIV G L E +
Sbjct: 40 INGEKTITVPAGDKLLNTLSGQGVFLASACGGGGSCAQCKCIVSDGGGSMLATEEAHFSP 99
Query: 137 RYLKKKPESWRLACQTIV 154
R + E WRL+CQT V
Sbjct: 100 REAR---EGWRLSCQTPV 114
>gi|53803519|ref|YP_114800.1| Na(+)-translocating NADH-quinone reductase subunit F [Methylococcus
capsulatus str. Bath]
gi|81681351|sp|Q605A0.1|NQRF_METCA RecName: Full=Na(+)-translocating NADH-quinone reductase subunit F;
Short=Na(+)-NQR subunit F; Short=Na(+)-translocating NQR
subunit F; AltName: Full=NQR complex subunit F; AltName:
Full=NQR-1 subunit F
gi|53757280|gb|AAU91571.1| Na(+)-translocating NADH-quinone reductase, F subunit
[Methylococcus capsulatus str. Bath]
Length = 407
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGGGG+C C V++++G E TEL ++ K+ + RL+CQ V
Sbjct: 68 CGGGGTCAQCRVQVLEGG---GEILPTELSHITKREAAQGDRLSCQVTV 113
>gi|357037466|ref|ZP_09099266.1| ferredoxin [Desulfotomaculum gibsoniae DSM 7213]
gi|355361631|gb|EHG09386.1| ferredoxin [Desulfotomaculum gibsoniae DSM 7213]
Length = 545
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNE-RTNTELRYLKKKPESWRLACQT-IVGNKE 158
C G G+CG C+V+ +L++ +T+ + R +SWRLACQ ++GN E
Sbjct: 40 CNGRGTCGKCLVQ---ASGMLSQPQTDEKERLGSMLSDSWRLACQAKVLGNVE 89
>gi|448680338|ref|ZP_21690655.1| (2Fe-2S)-binding protein [Haloarcula argentinensis DSM 12282]
gi|445768782|gb|EMA19859.1| (2Fe-2S)-binding protein [Haloarcula argentinensis DSM 12282]
Length = 111
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 74 PVERAKAISGEK--LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
P ++ E+ +LR+++LD + + Y + +NCGG G C TC V + D +
Sbjct: 10 PTGETHELTAERGAVLRDVLLDVGLSPHGRYAERVNCGGRGICATCGVRFAEPPDPDHWH 69
Query: 132 TNTELRYLKKKPESWRLACQTIV 154
+ R+ RL+CQ V
Sbjct: 70 DDLADRFGYP-----RLSCQLRV 87
>gi|119713345|gb|ABL97409.1| putative acetylornithine/succinylornithine aminotransferase
[uncultured marine bacterium EB80_02D08]
Length = 399
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 78 AKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGG----SCGTCIVEIIDGKDLLNERTN 133
AK IS L ++ N+I Y T G GGG S G+ +V+I K LN+ N
Sbjct: 249 AKGISNGFPLGGVLTTNEISKYMTVGSHGTTFGGGPVACSIGSKVVDITSKKSFLNQVRN 308
Query: 134 TELRYLK 140
E R+LK
Sbjct: 309 KEARFLK 315
>gi|354604355|ref|ZP_09022346.1| hypothetical protein HMPREF9450_01261 [Alistipes indistinctus YIT
12060]
gi|353348122|gb|EHB92396.1| hypothetical protein HMPREF9450_01261 [Alistipes indistinctus YIT
12060]
Length = 534
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133
P+ R ++ LL + + D IE CGG G CG C V+++ G+ L+ +
Sbjct: 11 PLGRTLQVARGALLSDAIHDLGIEF--------PCGGKGICGNCKVKLLAGEIALSPQHR 62
Query: 134 TELRYLKKKPESWRLAC 150
T L P WRLAC
Sbjct: 63 TVLERKGLLP-GWRLAC 78
>gi|448454947|ref|ZP_21594349.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
gi|445814327|gb|EMA64292.1| ferredoxin [Halorubrum lipolyticum DSM 21995]
Length = 116
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 80 AISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELR 137
A+ + LR +L+ + YA + +NCGG G C TC V I +G + ++R
Sbjct: 23 AVEPGRNLRRALLEAGLSPYAAATRRLNCGGRGLCATCGVRIREGPAPEHWHDRLADRFG 82
Query: 138 YLKKKPESWRLACQTIV 154
Y RL+CQ V
Sbjct: 83 YP-------RLSCQVTV 92
>gi|448585091|ref|ZP_21647700.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax gibbonsii ATCC 33959]
gi|445727430|gb|ELZ79043.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein
[Haloferax gibbonsii ATCC 33959]
Length = 121
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK 125
+LR+ +L+ I YA K NCGG G C TC V I G+
Sbjct: 39 VLRDALLEAGISPYARLTKRANCGGRGLCATCGVRIRSGE 78
>gi|384083352|ref|ZP_09994527.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium HIMB30]
Length = 406
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 12/88 (13%)
Query: 74 PVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCG--TCIVEIIDGKDLLNER 131
P + K +G KL+ N + D I L + CGGGGSC +CI++ G L E
Sbjct: 42 PDQSIKVAAGGKLM-NTLADAGIYLPSA------CGGGGSCQQCSCIIKSGGGDILPTEA 94
Query: 132 TNTELRYLKKKPESWRLACQTIVGNKEN 159
+ +K E WRL+CQ V N
Sbjct: 95 SAFTKGQVK---EGWRLSCQVAVKQDMN 119
>gi|163845952|ref|YP_001633996.1| ferredoxin [Chloroflexus aurantiacus J-10-fl]
gi|222523677|ref|YP_002568147.1| ferredoxin [Chloroflexus sp. Y-400-fl]
gi|163667241|gb|ABY33607.1| ferredoxin [Chloroflexus aurantiacus J-10-fl]
gi|222447556|gb|ACM51822.1| ferredoxin [Chloroflexus sp. Y-400-fl]
Length = 203
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGNK 157
C G G C TC V ++ G + L+ + E +L + E WRL CQ V K
Sbjct: 34 CDGTGFCQTCKVRVLAGAEFLSPPNDREKNWLPDARLQEGWRLGCQASVRGK 85
>gi|374288250|ref|YP_005035335.1| hypothetical protein BMS_1511 [Bacteriovorax marinus SJ]
gi|301166791|emb|CBW26368.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
Length = 256
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 15/82 (18%)
Query: 82 SGEKLLRN---IMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELR- 137
SGEK++ N +L+N ++ Y K +CGG +C CIV+I+ G+D +N EL+
Sbjct: 9 SGEKIVINEKKSLLEN-LKDNGHYIKS-SCGGHATCTDCIVKIVTGEDNVNPPEFNELQL 66
Query: 138 -----YLKKKPESWRLACQTIV 154
++ K+ RL+CQT V
Sbjct: 67 MGNVFHITKE----RLSCQTFV 84
>gi|262195893|ref|YP_003267102.1| ferredoxin [Haliangium ochraceum DSM 14365]
gi|262079240|gb|ACY15209.1| ferredoxin [Haliangium ochraceum DSM 14365]
Length = 104
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQTIVGNKE 158
C G G+CG C V +++G++ LN T+ E R+L RL+C+ + +
Sbjct: 36 CVGKGTCGLCRVRVVEGEEFLNPYTDEEQRHLGNVYHLTRVRLSCRAVAAGGD 88
>gi|448633060|ref|ZP_21674058.1| (2Fe-2S)-binding protein [Haloarcula vallismortis ATCC 29715]
gi|445752417|gb|EMA03841.1| (2Fe-2S)-binding protein [Haloarcula vallismortis ATCC 29715]
Length = 111
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
+LR+++LD + Y + +NCGG G C TC V +
Sbjct: 24 VLRDVLLDAGFSPHGRYAERVNCGGRGICATCGVRL 59
>gi|332284860|ref|YP_004416771.1| Ferredoxin [Pusillimonas sp. T7-7]
gi|330428813|gb|AEC20147.1| Ferredoxin [Pusillimonas sp. T7-7]
Length = 108
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 103 GKVMNCGGGGSCGTCIVEII-DGKDLLNERTNTELRYLKKKPES---WRLACQTIVGNKE 158
G V CGGG CGTC V + + D L TE L+ PE+ RL+CQ I+ E
Sbjct: 35 GIVAECGGGAICGTCHVHLQREYFDRLEPAGMTESALLQVVPEASETSRLSCQVIM--SE 92
Query: 159 NSGKVCSRT 167
+C R
Sbjct: 93 ELADMCVRV 101
>gi|448476218|ref|ZP_21603382.1| ferredoxin [Halorubrum aidingense JCM 13560]
gi|445815767|gb|EMA65686.1| ferredoxin [Halorubrum aidingense JCM 13560]
Length = 104
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 20/93 (21%)
Query: 72 SYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNER 131
SY E + G +LR+++ + + +Y NC G GSCGTC V+ +DG E
Sbjct: 5 SYQGEEIECEKG-AVLRDVLNEAGLSVYNGRSAQFNCRGMGSCGTCAVK-VDG-----EV 57
Query: 132 TNTELRYLKKKPESW----------RLACQTIV 154
+ E LK+K W RLACQT V
Sbjct: 58 SEPE---LKEKARLWFPPHHPSHDVRLACQTRV 87
>gi|397732233|ref|ZP_10498968.1| 2Fe-2S ferredoxin [Rhodococcus sp. JVH1]
gi|396931807|gb|EJI98981.1| 2Fe-2S ferredoxin [Rhodococcus sp. JVH1]
Length = 106
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 103 GKVMNCGGGGSCGTCIVEII-DGKDLLNERTNTE---LRYLKKKPESWRLACQTIVGNKE 158
G + CGG SC TC V + D L +E T+ E L YL+ RL+CQ IV +
Sbjct: 35 GIIAECGGSCSCATCHVILDEDSTGLFDEATDEERDLLEYLEGVQSHSRLSCQLIVNGQC 94
Query: 159 NSGKV 163
+ +V
Sbjct: 95 DGVRV 99
>gi|124004981|ref|ZP_01689824.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, f subunit
[Microscilla marina ATCC 23134]
gi|123989659|gb|EAY29205.1| NADH:ubiquinone oxidoreductase, na(+)-translocating, f subunit
[Microscilla marina ATCC 23134]
Length = 423
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 7/50 (14%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYL--KKKPESWRLACQTIV 154
CGGGG+C C +++D G D+L TE+ +L +++ E+ RLACQ V
Sbjct: 71 CGGGGTCAMCKCQVLDGGGDVL----PTEVPHLSRQEQKENVRLACQVKV 116
>gi|448683828|ref|ZP_21692448.1| (2Fe-2S)-binding protein [Haloarcula japonica DSM 6131]
gi|445783401|gb|EMA34230.1| (2Fe-2S)-binding protein [Haloarcula japonica DSM 6131]
Length = 111
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
+LR+++LD + + Y +NCGG G C TC V +
Sbjct: 24 ILRDVLLDAGLSPHGRYATRVNCGGRGICATCGVRL 59
>gi|410099661|ref|ZP_11294630.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Parabacteroides goldsteinii CL02T12C30]
gi|409218028|gb|EKN11001.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Parabacteroides goldsteinii CL02T12C30]
Length = 429
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQT 152
CGG GSCG C ++ +G TE+ + +K + WRL CQT
Sbjct: 75 CGGSGSCGQCRCQVPEGG---GNILPTEVGFFSRKQIKDHWRLGCQT 118
>gi|383454451|ref|YP_005368440.1| putative 2Fe-2S cluster assembly ferredoxin [Corallococcus
coralloides DSM 2259]
gi|380732765|gb|AFE08767.1| putative 2Fe-2S cluster assembly ferredoxin [Corallococcus
coralloides DSM 2259]
Length = 125
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 10/77 (12%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK----KPESWRLACQTIVGNKENSGK 162
+CGG C TC V + G D L+E+ + E+ L +P S RL+CQT VG ++ + +
Sbjct: 37 SCGGVCGCSTCHVWVRKGLDSLSEQRDDEMDRLDMGFDVRPYS-RLSCQTEVGGEDVTVE 95
Query: 163 VCSRTMFLLNLLAFLQK 179
+ + L+AF+ +
Sbjct: 96 ITEES-----LVAFMDE 107
>gi|359790729|ref|ZP_09293611.1| ferredoxin [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253319|gb|EHK56469.1| ferredoxin [Mesorhizobium alhagi CCNWXJ12-2]
Length = 566
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQ 151
CGG G C TC V I+ G L+ ELR L + P RLACQ
Sbjct: 286 CGGRGRCSTCRVGILAGAGNLSPPGGDELRLLTRIGAPPDVRLACQ 331
>gi|329897473|ref|ZP_08272116.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium IMCC3088]
gi|328921170|gb|EGG28573.1| Na(+)-translocating NADH-quinone reductase subunit F [gamma
proteobacterium IMCC3088]
Length = 406
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGT--CIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C CIV+ G L E + R + E WRL+CQT V
Sbjct: 68 CGGGGTCAQCKCIVKSGGGAMLPTEEGHFNRR---EAAEGWRLSCQTAV 113
>gi|448528909|ref|ZP_21620289.1| ferredoxin [Halorubrum hochstenium ATCC 700873]
gi|445710357|gb|ELZ62176.1| ferredoxin [Halorubrum hochstenium ATCC 700873]
Length = 130
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDG--KDLLNERTNTELRYLKKKPE 144
LR +LD + YA + +NCGG G C TC V + +G D ++R Y
Sbjct: 42 LRRTLLDAGLSPYARATRRLNCGGRGLCATCGVRVREGPPADHWHDRLADRFGYP----- 96
Query: 145 SWRLACQTIV 154
RL+C+ V
Sbjct: 97 --RLSCRIAV 104
>gi|333983334|ref|YP_004512544.1| ferredoxin [Methylomonas methanica MC09]
gi|333807375|gb|AEG00045.1| ferredoxin [Methylomonas methanica MC09]
Length = 116
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 50/117 (42%), Gaps = 31/117 (26%)
Query: 62 FIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEI 121
F +P D Y V A S + + + L+NKI + C G CGTC+V++
Sbjct: 6 FTSPEYRDKTVYAV----AGSHTQTVLKLALENKIPIN------FECEDG-ECGTCVVKV 54
Query: 122 --IDGK-----DLLNERTNTELRYLKKK-------------PESWRLACQTIVGNKE 158
ID K L E+ T L+ L K P WRLACQ IV +++
Sbjct: 55 SSIDNKLQRMGGPLTEKEKTVLKQLGKVTQMELEQMIVDDLPSEWRLACQMIVRDED 111
>gi|337293064|emb|CCB91060.1| Na(+)-translocating NADH-quinone reductase subunit F [Waddlia
chondrophila 2032/99]
Length = 416
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQT 152
CGG +C C V+I++G D L +++ + LK E WRL+CQ+
Sbjct: 63 CGGKATCKQCRVQIVEGVDPPLETDKSTFSRKELK---EGWRLSCQS 106
>gi|345873128|ref|ZP_08825047.1| ferredoxin [Thiorhodococcus drewsii AZ1]
gi|343917530|gb|EGV28328.1| ferredoxin [Thiorhodococcus drewsii AZ1]
Length = 116
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 20/67 (29%)
Query: 112 GSCGTCIVEI--IDGKD-----LLNERTNTELRYLKK-------------KPESWRLACQ 151
G CG CIV + +D K L ++ T LR+L K P WRLACQ
Sbjct: 45 GECGNCIVRVSSVDSKQQRMGYHLTDKEQTVLRHLGKLTKEDIERLALDDMPSEWRLACQ 104
Query: 152 TIVGNKE 158
IV +++
Sbjct: 105 MIVRDED 111
>gi|410460414|ref|ZP_11314093.1| ferredoxin [Bacillus azotoformans LMG 9581]
gi|409927217|gb|EKN64361.1| ferredoxin [Bacillus azotoformans LMG 9581]
Length = 116
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 103 GKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIVGNKENS 160
G + N GGG CG+C+ ++ G + L+ E R L + + +RL CQT V N
Sbjct: 30 GDLPNRCGGGLCGSCVCKVEKGAEFLDNVKKQERRKLGDELLSQGYRLGCQTFV----NG 85
Query: 161 GKV 163
G V
Sbjct: 86 GDV 88
>gi|357405582|ref|YP_004917506.1| Na(+)-translocating NADH-quinone reductase subunit F
[Methylomicrobium alcaliphilum 20Z]
gi|351718247|emb|CCE23914.1| Na(+)-translocating NADH-quinone reductase subunit F
[Methylomicrobium alcaliphilum 20Z]
Length = 406
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 83 GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK 142
G KLL + DNK+ + + CGGGGSC C V+I +G E TE ++ K+
Sbjct: 50 GSKLL-TALADNKLFVPSA------CGGGGSCAQCRVKIFEGG---GEILPTERSHITKR 99
Query: 143 P--ESWRLACQTIV 154
E RL+CQ V
Sbjct: 100 EANEGERLSCQVTV 113
>gi|114321606|ref|YP_743289.1| oxidoreductase FAD-binding subunit [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228000|gb|ABI57799.1| Oxidoreductase FAD-binding domain protein [Alkalilimnicola
ehrlichii MLHE-1]
Length = 352
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
GSCGTC+ + DG +N + T L ++ E +RL CQ
Sbjct: 56 GSCGTCVARVCDGDVRMNSKKQTAL-LSSEREEGYRLTCQAFA 97
>gi|424776768|ref|ZP_18203744.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 2
[Alcaligenes sp. HPC1271]
gi|422888061|gb|EKU30453.1| 2Fe-2S iron-sulfur cluster binding domain-containing protein 2
[Alcaligenes sp. HPC1271]
Length = 92
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 110 GGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
GGG CGTC I +G +E E ++L ++ E +R+ACQT V
Sbjct: 38 GGGICGTCKCRITEGLSNTDEVKAKEHKHLSEQDLAEGFRMACQTFV 84
>gi|296131611|ref|YP_003638858.1| ferredoxin [Thermincola potens JR]
gi|296030189|gb|ADG80957.1| ferredoxin [Thermincola potens JR]
Length = 541
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQT-IVGNKE 158
C G G+CG C V K L+ T TE R L K + WRLACQ ++G+ E
Sbjct: 42 CNGKGTCGKCRVRY---KGTLSAPTETETRILGPKVGAGWRLACQARVMGDVE 91
>gi|448434332|ref|ZP_21586142.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
gi|445685248|gb|ELZ37603.1| ferredoxin [Halorubrum tebenquichense DSM 14210]
Length = 104
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR+++ + + +Y + +NC G GSCG+C V++ +++ L P
Sbjct: 19 LRDVLKEAGLSVYNGKMEQLNCRGAGSCGSCAVQVEGEVSEPSKKERARLWLPPHHPNHD 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 VRLACQTTV 87
>gi|224026433|ref|ZP_03644799.1| hypothetical protein BACCOPRO_03189 [Bacteroides coprophilus DSM
18228]
gi|224019669|gb|EEF77667.1| hypothetical protein BACCOPRO_03189 [Bacteroides coprophilus DSM
18228]
Length = 507
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES--WRLACQTIV 154
CGG G CG C V I+ G+ E+T +L++K S W LAC T++
Sbjct: 39 CGGKGLCGNCKVRILSGQ---VEKTEVHRAFLERKHLSSEWCLACLTVL 84
>gi|451979650|ref|ZP_21928065.1| putative Ferredoxin [Nitrospina gracilis 3/211]
gi|451763178|emb|CCQ89262.1| putative Ferredoxin [Nitrospina gracilis 3/211]
Length = 101
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR + I LY + NC G GSCGTC+VE I+ + +N+ E L K +
Sbjct: 25 LRKAAQHHDISLYRGLHEYTNCHGMGSCGTCLVE-IEPMEHVNDHGLIE--KLHKINGNR 81
Query: 147 RLACQTIV 154
+LAC+T V
Sbjct: 82 KLACRTKV 89
>gi|282859445|ref|ZP_06268550.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bivia
JCVIHMP010]
gi|424900872|ref|ZP_18324414.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella bivia DSM 20514]
gi|282587673|gb|EFB92873.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella bivia
JCVIHMP010]
gi|388593072|gb|EIM33311.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella bivia DSM 20514]
Length = 420
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG SCG C ++++G L +ER + + +K E+WRL CQ V
Sbjct: 68 CGGKASCGQCKCQVVEGGGEILDSERPHFSRKEIK---ENWRLGCQAKV 113
>gi|253997045|ref|YP_003049109.1| ferredoxin, 2Fe-2S type, ISC system [Methylotenera mobilis JLW8]
gi|253983724|gb|ACT48582.1| ferredoxin, 2Fe-2S type, ISC system [Methylotenera mobilis JLW8]
Length = 113
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY 138
+A +GE + +++L+N I++ C +C TC V + +G LNE T E
Sbjct: 20 EAQTGESIC-DVLLNNDIDIDHA------CDKACACTTCHVIVREGFKSLNESTEQEDDL 72
Query: 139 LKK----KPESWRLACQTIVGNKE 158
L K +P S RL+CQT+VG ++
Sbjct: 73 LDKAWGLEPNS-RLSCQTLVGTED 95
>gi|282892090|ref|ZP_06300565.1| hypothetical protein pah_c207o014 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174445|ref|YP_004651255.1| Na(+)-translocating NADH-quinone reductase subunit F [Parachlamydia
acanthamoebae UV-7]
gi|281497985|gb|EFB40329.1| hypothetical protein pah_c207o014 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478803|emb|CCB85401.1| putative Na(+)-translocating NADH-quinone reductase subunit F
[Parachlamydia acanthamoebae UV-7]
Length = 446
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG +C C V I++G D L +R + LK E WRL+CQ V
Sbjct: 89 CGGKATCKQCRVRIVEGADEPLETDRGTFNKKELK---EGWRLSCQAKV 134
>gi|217969247|ref|YP_002354481.1| Na(+)-translocating NADH-quinone reductase subunit F [Thauera sp.
MZ1T]
gi|217506574|gb|ACK53585.1| NADH:ubiquinone oxidoreductase, subunit F [Thauera sp. MZ1T]
Length = 407
Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGGGG+C C +++G TE + K+ E WRL+CQT V
Sbjct: 69 CGGGGTCAQCKCVVMEGG---GSMLPTEESHFTKRDAKEGWRLSCQTPV 114
>gi|359405290|ref|ZP_09198069.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella stercorea DSM
18206]
gi|357559077|gb|EHJ40541.1| NADH:ubiquinone oxidoreductase, F subunit [Prevotella stercorea DSM
18206]
Length = 423
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQ 151
CGG SCG C V++++G E ++E + +K ++WRL CQ
Sbjct: 70 CGGKASCGQCKVQVLEGG---GEILDSEKPHFTRKQIKDNWRLGCQ 112
>gi|297620460|ref|YP_003708597.1| Na(+)-translocating NADH-quinone reductase subunit F [Waddlia
chondrophila WSU 86-1044]
gi|297375761|gb|ADI37591.1| Na(+)-translocating NADH-quinone reductase subunit F [Waddlia
chondrophila WSU 86-1044]
Length = 430
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQT 152
CGG +C C V+I++G D L +++ + LK E WRL+CQ+
Sbjct: 77 CGGKATCKQCRVQIVEGVDPPLETDKSTFSRKELK---EGWRLSCQS 120
>gi|37521090|ref|NP_924467.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421]
gi|35212086|dbj|BAC89462.1| ferredoxin like protein [Gloeobacter violaceus PCC 7421]
Length = 115
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW 146
LR +L+ + LY ++NC G G+CGTC V I ++E E L P
Sbjct: 19 LRQFLLEQNVPLYNGPSSLINCHGLGTCGTCAVGI---AGPVSEPGGREKFRLGLPPHKG 75
Query: 147 -----RLACQ-TIVGNKE 158
RLACQ T++G+ E
Sbjct: 76 VEGGRRLACQVTVLGDIE 93
>gi|254786011|ref|YP_003073440.1| Na(+)-translocating NADH-quinone reductase subunit F
[Teredinibacter turnerae T7901]
gi|237683890|gb|ACR11154.1| NADH:ubiquinone oxidoreductase, F subunit [Teredinibacter turnerae
T7901]
Length = 407
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK 141
+G KLL+ + +N A CGGGG+C C ++ +G + TE + +
Sbjct: 50 AGGKLLQTLAANNIFLASA-------CGGGGTCAQCKCKVFEGGGSM---LPTEESHFTR 99
Query: 142 KPE--SWRLACQTIV 154
+ E WRL+CQ V
Sbjct: 100 RDERDGWRLSCQVAV 114
>gi|345880839|ref|ZP_08832377.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oulorum F0390]
gi|343921813|gb|EGV32525.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella oulorum F0390]
Length = 422
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQ 151
CGG SCG C V++++G L +ER + + +K + WRL CQ
Sbjct: 69 CGGKASCGQCKVQVLEGGGEILDSERPHFSRKEIK---DHWRLGCQ 111
>gi|441496862|ref|ZP_20979088.1| ferredoxin, 2Fe-2S type [Fulvivirga imtechensis AK7]
gi|441439335|gb|ELR72653.1| ferredoxin, 2Fe-2S type [Fulvivirga imtechensis AK7]
Length = 132
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGG G C TC + +I+G + L T E R+++ E+ RL CQ I+
Sbjct: 62 CGGKGRCTTCKMIVIEGMENLGHLTVHEKRFMEMDALKENERLTCQCIL 110
>gi|449131937|ref|ZP_21768111.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula europaea 6C]
gi|448888746|gb|EMB19048.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula europaea 6C]
Length = 419
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGGGG+C C V++ + G DLL TE ++ KK E RL+CQ V
Sbjct: 80 CGGGGTCAQCKVKVAEGGGDLL----ATEAGHINKKEAAEGERLSCQVAV 125
>gi|325108122|ref|YP_004269190.1| NADH:ubiquinone oxidoreductase subunit F [Planctomyces brasiliensis
DSM 5305]
gi|324968390|gb|ADY59168.1| NADH:ubiquinone oxidoreductase, subunit F [Planctomyces
brasiliensis DSM 5305]
Length = 406
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKKP--ESWRLACQTIV 154
CGGGG+C C V ++D G D+L TE ++ K+ E RL+CQ V
Sbjct: 67 CGGGGTCAQCKVNVLDGGGDIL----ATEKNHISKREAREGMRLSCQVPV 112
>gi|119505781|ref|ZP_01627849.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2080]
gi|119458415|gb|EAW39522.1| Na(+)-translocating NADH-quinone reductase subunit F [marine gamma
proteobacterium HTCC2080]
Length = 407
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGGGG+C C ++ DG L E ++ R + + WRL+CQT V
Sbjct: 69 CGGGGTCAQCKCQVSDGGGSMLPTEESHFTRR---QANDGWRLSCQTPV 114
>gi|146279221|ref|YP_001169379.1| hypothetical protein Rsph17025_3190 [Rhodobacter sphaeroides ATCC
17025]
gi|145557462|gb|ABP72074.1| Uncharacterized flavoprotein-like protein [Rhodobacter sphaeroides
ATCC 17025]
Length = 95
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 88 RNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPES 145
R I + K+ TYG G CGTC+ +I+G + L+E + ELR L + +
Sbjct: 22 RIIEMSEKVGSGITYGCRE-----GECGTCLTHVIEGSEHLSEPSALELRVLSENMAGKD 76
Query: 146 WRLACQ 151
RLACQ
Sbjct: 77 DRLACQ 82
>gi|357404800|ref|YP_004916724.1| 2Fe-2S ferredoxin-like [Methylomicrobium alcaliphilum 20Z]
gi|351717465|emb|CCE23130.1| putative 2Fe-2S ferredoxin-like [Methylomicrobium alcaliphilum 20Z]
Length = 545
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQ 151
CGG G+CG C++++I G+ N T E + L + + +RLACQ
Sbjct: 50 CGGLGTCGACLIQVISGR--FNPPTPAERQKLLPDQLVQGYRLACQ 93
>gi|325971885|ref|YP_004248076.1| ferredoxin--NAD(+) reductase [Sphaerochaeta globus str. Buddy]
gi|324027123|gb|ADY13882.1| Ferredoxin--NAD(+) reductase [Sphaerochaeta globus str. Buddy]
Length = 368
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 5/46 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQ 151
CGG GSCG C V +++G E TEL ++ ++K + RL+CQ
Sbjct: 70 CGGRGSCGLCKVRVVEGG---GEYLPTELPFISEEEKKQQIRLSCQ 112
>gi|408793187|ref|ZP_11204797.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
meyeri serovar Hardjo str. Went 5]
gi|408464597|gb|EKJ88322.1| adenylate/guanylate cyclase catalytic domain protein [Leptospira
meyeri serovar Hardjo str. Went 5]
Length = 449
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGG C TC V I +G L+ R E +K P RLACQT V
Sbjct: 38 CGGNAKCTTCRVFITEGLSHLSSRNEREQTLADRKGWPSEIRLACQTEV 86
>gi|392395155|ref|YP_006431757.1| metal-binding protein [Desulfitobacterium dehalogenans ATCC 51507]
gi|390526233|gb|AFM01964.1| putative metal-binding protein [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 612
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQT 152
C G G+CG C V I G + E T +LRYL + E RLACQ
Sbjct: 34 CNGKGTCGKCKVRFIQG---VPEATPADLRYLSTEELEEGIRLACQV 77
>gi|340624126|ref|YP_004742579.1| ferredoxin [Methanococcus maripaludis X1]
gi|339904394|gb|AEK19836.1| ferredoxin [Methanococcus maripaludis X1]
Length = 592
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQT 152
CGG G+CG C V ++ GK ++ ++ EL YL K RL+C+T
Sbjct: 36 CGGVGTCGKCKVRVVGGK--ISPLSSEELEYLSKDEIDRGIRLSCRT 80
>gi|89898388|ref|YP_515498.1| ferredoxin [2Fe-2S] IV [Chlamydophila felis Fe/C-56]
gi|89331760|dbj|BAE81353.1| ferredoxin [2Fe-2S] IV [Chlamydophila felis Fe/C-56]
Length = 91
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES-WRLACQ 151
G CGTC++E+++G++ L+ T E +L +S RLACQ
Sbjct: 39 GVCGTCVIEVLEGQENLSSFTEEEKDFLGDPEDSNERLACQ 79
>gi|427724305|ref|YP_007071582.1| ferredoxin [Leptolyngbya sp. PCC 7376]
gi|427356025|gb|AFY38748.1| ferredoxin [Leptolyngbya sp. PCC 7376]
Length = 170
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 73 YPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLL---N 129
+P+++ + + L I+L K+ + CG G C TC + + G++ L N
Sbjct: 7 HPLDKVVTANENENLLEILLKEKMNVLQA------CGAQGRCATCHIHVKSGEEALSPMN 60
Query: 130 ERTNTELRYLKKKPESWRLACQT 152
++ L ++ + RLACQT
Sbjct: 61 DQERLTLSFIATAQANSRLACQT 83
>gi|149177065|ref|ZP_01855673.1| Na(+)-translocating NADH-quinone reductase subunit F [Planctomyces
maris DSM 8797]
gi|148844130|gb|EDL58485.1| Na(+)-translocating NADH-quinone reductase subunit F [Planctomyces
maris DSM 8797]
Length = 397
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID-GKDLL-NERTNTELRYL 139
+G KLL N + +N+I + + CGGGG+C C V+++ G D+L ER++ R +
Sbjct: 40 AGGKLL-NALAENQIFVSSA------CGGGGTCAQCEVKVLQGGGDILPTERSHFNNREV 92
Query: 140 KKKPESWRLACQTIV 154
+ E RL+CQ V
Sbjct: 93 R---EGCRLSCQVPV 104
>gi|340350761|ref|ZP_08673735.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
nigrescens ATCC 33563]
gi|445112360|ref|ZP_21377008.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella nigrescens F0103]
gi|339607138|gb|EGQ12088.1| Na(+)-translocating NADH-quinone reductase subunit F [Prevotella
nigrescens ATCC 33563]
gi|444841584|gb|ELX68598.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Prevotella nigrescens F0103]
Length = 422
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKD--LLNERTNTELRYLKKKPESWRLACQTIV 154
CGG GSCG C ++++G L +ER + + +K WRL CQ V
Sbjct: 69 CGGKGSCGQCKCQVLEGGGEILDSERPHFTRKEIKNH---WRLGCQAKV 114
>gi|325102871|ref|YP_004272525.1| ferredoxin [Pedobacter saltans DSM 12145]
gi|324971719|gb|ADY50703.1| ferredoxin [Pedobacter saltans DSM 12145]
Length = 109
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 107 NCGGGGSCGTCIVEIIDGKDL-----LNERTNTELRYLKKKPESWRLACQTIVGNKENSG 161
+C G G CGTC++EI++ K NE T E ++++ K + RLACQ ++ +
Sbjct: 46 DCLGMGKCGTCLIEILEFKTQPTFLDRNEGTTIERQHMQNK--NIRLACQILIDEHLDGL 103
Query: 162 KV 163
K+
Sbjct: 104 KI 105
>gi|338732292|ref|YP_004670765.1| putative Na(+)-translocating NADH-quinone reductase subunit F
[Simkania negevensis Z]
gi|336481675|emb|CCB88274.1| putative Na(+)-translocating NADH-quinone reductase subunit F
[Simkania negevensis Z]
Length = 425
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEIIDGK-DLL-NERTNTELRYLKKKPESWRLACQTIVGN 156
CGG +C C V++++G D+L +R++ + LK E WRL+CQ V N
Sbjct: 71 CGGKATCKQCKVQVLEGGGDILETDRSSFSPKQLK---EGWRLSCQCKVKN 118
>gi|378826933|ref|YP_005189665.1| putative adenylate/guanylate cyclase [Sinorhizobium fredii HH103]
gi|365179985|emb|CCE96840.1| putative adenylate/guanylate cyclase [Sinorhizobium fredii HH103]
Length = 558
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 100 ATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQ 151
A + V CGG G C TC V +I+G D EL L + P + RLACQ
Sbjct: 276 AGFPHVSVCGGRGRCSTCRVRVIEGLDGQPAPEAAELTTLSRIGAPANVRLACQ 329
>gi|169823930|ref|YP_001691541.1| hypothetical protein FMG_0233 [Finegoldia magna ATCC 29328]
gi|167830735|dbj|BAG07651.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 525
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 10/66 (15%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PE 144
L N +L+N I + + C G +CG C ++I++G +NE T+TE R LKK+
Sbjct: 22 LMNALLENDIYIDNS------CNGKLTCGKCKIKIVEGN--VNEITDTEKRLLKKEEIEN 73
Query: 145 SWRLAC 150
RL+C
Sbjct: 74 GIRLSC 79
>gi|448494445|ref|ZP_21609432.1| ferredoxin [Halorubrum californiensis DSM 19288]
gi|445689280|gb|ELZ41520.1| ferredoxin [Halorubrum californiensis DSM 19288]
Length = 104
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--- 143
LR+++ + + +Y + +NC G GSCG+C V+ +DG+ ++E + E L P
Sbjct: 19 LRDVLKEAGLSVYNGKMEQLNCRGSGSCGSCAVQ-VDGE--VSEPSKKEKARLWLPPHHP 75
Query: 144 -ESWRLACQTIV 154
RL+CQT V
Sbjct: 76 SHDVRLSCQTKV 87
>gi|390940151|ref|YP_006403888.1| ferredoxin [Sulfurospirillum barnesii SES-3]
gi|390193258|gb|AFL68313.1| ferredoxin [Sulfurospirillum barnesii SES-3]
Length = 98
Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKK-----PESWRLACQ 151
G CGTC+VEI+ G + L+ E++ LK+ ++ RLACQ
Sbjct: 40 GQCGTCVVEIVQGMEFLSPINEKEVKVLKEICVGTCSKNSRLACQ 84
>gi|116621789|ref|YP_823945.1| ferredoxin [Candidatus Solibacter usitatus Ellin6076]
gi|116224951|gb|ABJ83660.1| ferredoxin [Candidatus Solibacter usitatus Ellin6076]
Length = 546
Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVGNKENSGKVCSRTM 168
G C CIVEI +G + L RT E R+L+ ++RL+CQ + E +G V TM
Sbjct: 39 GKCKECIVEISEGMESLTARTEAE-RHLRG---NFRLSCQAAI---EGNGPVRCHTM 88
>gi|297587811|ref|ZP_06946455.1| ferredoxin [Finegoldia magna ATCC 53516]
gi|297574500|gb|EFH93220.1| ferredoxin [Finegoldia magna ATCC 53516]
Length = 525
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 10/66 (15%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PE 144
L N +L+N + + + C G +CG C ++II+G +NE T+TE R LKK+
Sbjct: 22 LMNALLENDVYIDNS------CNGKLTCGKCKIKIIEGN--VNEITDTEKRLLKKEEIEN 73
Query: 145 SWRLAC 150
RL+C
Sbjct: 74 GIRLSC 79
>gi|78186757|ref|YP_374800.1| chlorosome envelope protein I [Chlorobium luteolum DSM 273]
gi|78166659|gb|ABB23757.1| chlorosome envelope protein I [Chlorobium luteolum DSM 273]
Length = 218
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP--ESWRLACQTIVGNKENSGKVCS 165
C G G C TC V + +G + L+ ++ E +L ++ R+ACQ ++ KE + + S
Sbjct: 33 CAGNGVCQTCYVTVEEGAECLSPLSDVEKAFLSERQINAGGRMACQAVL-EKEGTVTILS 91
Query: 166 R 166
R
Sbjct: 92 R 92
>gi|408420317|ref|YP_006761731.1| Na(+)-translocating NADH-quinone reductase subunit F NqrF
[Desulfobacula toluolica Tol2]
gi|405107530|emb|CCK81027.1| NqrF: Na(+)-translocating NADH-quinone reductase, subunit F
[Desulfobacula toluolica Tol2]
Length = 402
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYL--KKKPESWRLACQTIVGN 156
CGG GSCG C E+ DG + TEL +L K K RL+CQ + N
Sbjct: 68 CGGSGSCGMCKCEVTDGGGSI---LPTELAHLTRKDKLAGKRLSCQLKIKN 115
>gi|319649261|ref|ZP_08003420.1| hypothetical protein HMPREF1013_00024 [Bacillus sp. 2_A_57_CT2]
gi|317399066|gb|EFV79745.1| hypothetical protein HMPREF1013_00024 [Bacillus sp. 2_A_57_CT2]
Length = 116
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Query: 103 GKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESW-----RLACQTIV 154
G + N GGG CGTC+ + +G + L+ N +++ +K E W RL CQT V
Sbjct: 30 GDLPNRCGGGICGTCVFKTEEGAEYLD---NVKIQERRKLGEEWLGKGYRLGCQTFV 83
>gi|86607680|ref|YP_476442.1| (Fe-S)-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556222|gb|ABD01179.1| iron-sulfur cluster-binding protein [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 343
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 98 LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQT-IV 154
L A V CGG +C TC + I++G T E R ++ P RLACQT I
Sbjct: 25 LKAGVRHVHACGGNAACSTCRILILEGSQNCRSMTPAEKRLAQRLDLPVHIRLACQTRIT 84
Query: 155 GN 156
G+
Sbjct: 85 GD 86
>gi|405354090|ref|ZP_11023499.1| Ferredoxin, 2Fe-2S [Chondromyces apiculatus DSM 436]
gi|397092781|gb|EJJ23530.1| Ferredoxin, 2Fe-2S [Myxococcus sp. (contaminant ex DSM 436)]
Length = 125
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 107 NCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK----KPESWRLACQTIVGNKE 158
+CGG C TC + + G D L+E+T+ E L +P S RL+CQT +G+++
Sbjct: 37 SCGGVCGCSTCHIWVRKGLDSLSEQTDAEADRLDMGFDVRPYS-RLSCQTELGSQD 91
>gi|402572978|ref|YP_006622321.1| metal-binding protein [Desulfosporosinus meridiei DSM 13257]
gi|402254175|gb|AFQ44450.1| putative metal-binding protein [Desulfosporosinus meridiei DSM
13257]
Length = 636
Score = 35.8 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154
CGG G+CG C V ++ G ++ N L K RLAC+T++
Sbjct: 38 CGGKGTCGACKVVVLSGDPIIEGTGNLTPEQLSK---GIRLACKTLI 81
>gi|296271601|ref|YP_003654232.1| ferredoxin [Arcobacter nitrofigilis DSM 7299]
gi|296095776|gb|ADG91726.1| ferredoxin [Arcobacter nitrofigilis DSM 7299]
Length = 98
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKK-----PESWRLACQ 151
G CGTC+VEI G + ++E E++ +K+ E RL+CQ
Sbjct: 40 GECGTCVVEIEQGMEFISEINEKEIKVIKENCVGTATEKTRLSCQ 84
>gi|411118137|ref|ZP_11390518.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
gi|410711861|gb|EKQ69367.1| family 3 adenylate cyclase [Oscillatoriales cyanobacterium JSC-12]
Length = 348
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 108 CGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQTIVGNKENSGKVC 164
CGG C TC V I++G++ RT E + +P RLACQT + + GK+
Sbjct: 35 CGGNARCSTCRVVILEGQEYCAPRTPAEQELATQMGFEPRV-RLACQTAIAQQ---GKIA 90
Query: 165 SRTMFL 170
R + L
Sbjct: 91 LRRLSL 96
>gi|46446718|ref|YP_008083.1| ferredoxin [2Fe-2S] 4 [Candidatus Protochlamydia amoebophila UWE25]
gi|46400359|emb|CAF23808.1| putative ferredoxin [2Fe-2S] 4 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 88
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQ 151
G CGTC++E+ +GK+ L+ T E +L + RLACQ
Sbjct: 37 GVCGTCVIEVKEGKENLSPPTKEEEDFLGEGTCHERLACQ 76
>gi|323138489|ref|ZP_08073558.1| ferredoxin [Methylocystis sp. ATCC 49242]
gi|322396285|gb|EFX98817.1| ferredoxin [Methylocystis sp. ATCC 49242]
Length = 101
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 10/77 (12%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE---LRY 138
+G +LL I L A V CGG CG C V + +GK L++ T +E L
Sbjct: 17 TGSRLLDAI-------LAAGEAIVSKCGGEAKCGQCHVFVQEGKKSLSKTTRSENEKLDS 69
Query: 139 LKKKPESWRLACQTIVG 155
+ RLACQ ++G
Sbjct: 70 IVGVSSKSRLACQALIG 86
>gi|392397955|ref|YP_006434556.1| ferredoxin [Flexibacter litoralis DSM 6794]
gi|390529033|gb|AFM04763.1| ferredoxin [Flexibacter litoralis DSM 6794]
Length = 113
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 80 AISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRY- 138
A + + LL+NI LD +I+ + CGG G C TC + I +G + L + + E +
Sbjct: 16 ADTQKSLLQNI-LDEQIDWLHS------CGGKGKCTTCKMIIKEGSENLTPKGSVEKNFF 68
Query: 139 -LKKKPESWRLACQTIVGN 156
L++ E+ RLACQ + N
Sbjct: 69 ALERLKENERLACQCSLKN 87
>gi|339328632|ref|YP_004688324.1| vanillate O-demethylase oxidoreductase VanB [Cupriavidus necator
N-1]
gi|338171233|gb|AEI82286.1| vanillate O-demethylase oxidoreductase VanB [Cupriavidus necator
N-1]
Length = 321
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 15/79 (18%)
Query: 55 KPEIELEFIAPRA---GDDGSYPVERAKA-----ISGEKLLRNIMLDNKIELYATYGKVM 106
K + E+ + +A DDG++ V+ A I E+ + +++L+ I++Y + +
Sbjct: 215 KQRVHYEYFSAKAVDTSDDGAFDVKLASTGQVFQIPAERSITSVLLEAGIDIYTSCEE-- 272
Query: 107 NCGGGGSCGTCIVEIIDGK 125
G+CGTC+ I++G+
Sbjct: 273 -----GTCGTCVTRILEGE 286
>gi|291280396|ref|YP_003497231.1| hypothetical protein DEFDS_2025 [Deferribacter desulfuricans SSM1]
gi|290755098|dbj|BAI81475.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 511
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 108 CGGGGSCGTCIVEII--DGKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
C G G CG C V+I+ DGK+ +N+ T + L K +RLACQ IV
Sbjct: 41 CKGSGQCGKCKVKIVSADGKE-INKPTKKDRLILAKINLDNGYRLACQYIV 90
>gi|417305369|ref|ZP_12092339.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica WH47]
gi|421613225|ref|ZP_16054313.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SH28]
gi|327538323|gb|EGF24997.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica WH47]
gi|408495992|gb|EKK00563.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SH28]
Length = 413
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGGGG+C C V++ + G DLL TE ++ KK E RL+CQ V
Sbjct: 74 CGGGGTCAQCKVKVSEGGGDLL----ATEAGHINKKEAAEGERLSCQVAV 119
>gi|33943595|gb|AAQ55474.1| phenol hydroxylase P5 protein-like protein [Methanococcus voltae
PS]
Length = 686
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Query: 85 KLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDL-LNERTNTELRYLKKKP 143
+LL NI+ +N +++ + CGG G+CG C V+I++ + +++ + ELRYL +
Sbjct: 22 ELLLNILQNNSLKVESP------CGGAGTCGKCKVKILNQNETNVSKPSPEELRYLSEDE 75
Query: 144 ES--WRLACQTIV 154
S RL+C T V
Sbjct: 76 LSSGIRLSCLTYV 88
>gi|294678801|ref|YP_003579416.1| ferredoxin IV [Rhodobacter capsulatus SB 1003]
gi|338818107|sp|P0CY92.1|FER4_RHOCA RecName: Full=Ferredoxin-4; AltName: Full=Ferredoxin IV;
Short=FdIV; AltName: Full=Ferredoxin, plant-type
gi|338818108|sp|D5ARY7.1|FER4_RHOCB RecName: Full=Ferredoxin-4; AltName: Full=Ferredoxin IV;
Short=FdIV; AltName: Full=Ferredoxin, plant-type
gi|46142|emb|CAA35698.1| chloroplast-type ferrodoxin [Rhodobacter capsulatus SB 1003]
gi|151916|gb|AAA26109.1| ferredoxin IV [Rhodobacter capsulatus]
gi|435529|emb|CAA51403.1| fdxC [Rhodobacter capsulatus]
gi|294477621|gb|ADE87009.1| ferredoxin IV [Rhodobacter capsulatus SB 1003]
gi|742359|prf||2009377F fdxC protein
Length = 95
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQ 151
G CGTC+ I++G + L+E T E+R L++ + RLACQ
Sbjct: 41 GECGTCMTHILEGSENLSEPTALEMRVLEENLGGKDDRLACQ 82
>gi|269468725|gb|EEZ80347.1| ferredoxin [uncultured SUP05 cluster bacterium]
Length = 112
Score = 35.8 bits (81), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 89 NIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK----KPE 144
N +L N +E+ C +C TC V + +G D + E TE L K P+
Sbjct: 29 NALLKNDVEIEHA------CEMSNACTTCHVYVREGFDSIEESDETEDDLLDKAWGLDPD 82
Query: 145 SWRLACQTIVGN 156
S RL+CQ +VGN
Sbjct: 83 S-RLSCQAVVGN 93
>gi|32471618|ref|NP_864611.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SH 1]
gi|440714707|ref|ZP_20895283.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SWK14]
gi|32443459|emb|CAD72292.1| Na+-translocating NADH:quinone oxidoreductase, subunit nqrF
[Rhodopirellula baltica SH 1]
gi|436440400|gb|ELP33727.1| Na(+)-translocating NADH-quinone reductase subunit F
[Rhodopirellula baltica SWK14]
Length = 419
Score = 35.8 bits (81), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 108 CGGGGSCGTCIVEIID-GKDLLNERTNTELRYLKKK--PESWRLACQTIV 154
CGGGG+C C V++ + G DLL TE ++ KK E RL+CQ V
Sbjct: 80 CGGGGTCAQCKVKVSEGGGDLL----ATEAGHINKKEAAEGERLSCQVAV 125
>gi|346307627|ref|ZP_08849759.1| hypothetical protein HMPREF9457_01468 [Dorea formicigenerans
4_6_53AFAA]
gi|345904976|gb|EGX74717.1| hypothetical protein HMPREF9457_01468 [Dorea formicigenerans
4_6_53AFAA]
Length = 84
Score = 35.8 bits (81), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 16/69 (23%)
Query: 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPES 145
L +NI +DN C G G CG C V I+ G+ E ++TELR+L KPE
Sbjct: 26 LAQNIFIDNP------------CNGKGVCGKCKVRIVSGEA--GEVSSTELRFL--KPEE 69
Query: 146 WRLACQTIV 154
+ C + +
Sbjct: 70 VKKWCASFL 78
>gi|448427446|ref|ZP_21583761.1| ferredoxin [Halorubrum terrestre JCM 10247]
gi|448451316|ref|ZP_21592799.1| ferredoxin [Halorubrum litoreum JCM 13561]
gi|448482869|ref|ZP_21605640.1| ferredoxin [Halorubrum arcis JCM 13916]
gi|448513889|ref|ZP_21616820.1| ferredoxin [Halorubrum distributum JCM 9100]
gi|448526601|ref|ZP_21619870.1| ferredoxin [Halorubrum distributum JCM 10118]
gi|445678133|gb|ELZ30627.1| ferredoxin [Halorubrum terrestre JCM 10247]
gi|445693042|gb|ELZ45205.1| ferredoxin [Halorubrum distributum JCM 9100]
gi|445698828|gb|ELZ50866.1| ferredoxin [Halorubrum distributum JCM 10118]
gi|445810750|gb|EMA60766.1| ferredoxin [Halorubrum litoreum JCM 13561]
gi|445821155|gb|EMA70951.1| ferredoxin [Halorubrum arcis JCM 13916]
Length = 104
Score = 35.8 bits (81), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 87 LRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ES 145
LR+++ + + +Y + +NC G GSCG+C V++ ++ L P
Sbjct: 19 LRDVLKEAGLSVYNGKMEQLNCRGAGSCGSCAVQVEGEVSEPGKKERARLWLPPHHPSHD 78
Query: 146 WRLACQTIV 154
RLACQT V
Sbjct: 79 VRLACQTKV 87
>gi|90021447|ref|YP_527274.1| Na(+)-translocating NADH-quinone reductase subunit F
[Saccharophagus degradans 2-40]
gi|89951047|gb|ABD81062.1| NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
[Saccharophagus degradans 2-40]
Length = 407
Score = 35.8 bits (81), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 82 SGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGT--CIVEIIDGKDLLNERTNTELRYL 139
+G KLL+ + +N A CGGGG+C C+VE G L E ++ R
Sbjct: 50 AGGKLLQTLASNNLFLASA-------CGGGGTCAQCKCVVEEGGGSILPTEESHFTKR-- 100
Query: 140 KKKPESWRLACQTIV 154
+ E WRL+CQ V
Sbjct: 101 -EAGEGWRLSCQVPV 114
>gi|77465204|ref|YP_354707.1| 2Fe-2S ferredoxin [Rhodobacter sphaeroides 2.4.1]
gi|126464666|ref|YP_001045779.1| ferredoxin [Rhodobacter sphaeroides ATCC 17029]
gi|221369203|ref|YP_002520299.1| Ferredoxin [Rhodobacter sphaeroides KD131]
gi|332560810|ref|ZP_08415128.1| Ferredoxin [Rhodobacter sphaeroides WS8N]
gi|77389622|gb|ABA80806.1| 2Fe-2S ferredoxin [Rhodobacter sphaeroides 2.4.1]
gi|126106477|gb|ABN79007.1| ferredoxin [Rhodobacter sphaeroides ATCC 17029]
gi|221162255|gb|ACM03226.1| Ferredoxin [Rhodobacter sphaeroides KD131]
gi|332274608|gb|EGJ19924.1| Ferredoxin [Rhodobacter sphaeroides WS8N]
Length = 95
Score = 35.8 bits (81), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 112 GSCGTCIVEIIDGKDLLNERTNTELRYLKK--KPESWRLACQ 151
G CGTC+ II+G + L++ + ELR L + + RLACQ
Sbjct: 41 GECGTCVTHIIEGSENLSDPSALELRVLSENMAGKDDRLACQ 82
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,118,150,808
Number of Sequences: 23463169
Number of extensions: 131378682
Number of successful extensions: 330882
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 835
Number of HSP's that attempted gapping in prelim test: 330198
Number of HSP's gapped (non-prelim): 1178
length of query: 194
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 59
effective length of database: 9,191,667,552
effective search space: 542308385568
effective search space used: 542308385568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 72 (32.3 bits)