Query 029369
Match_columns 194
No_of_seqs 163 out of 1277
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:22:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029369.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029369hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bt6_A Adrenodoxin 1; rutheniu 99.8 1.6E-21 5.5E-26 146.5 7.9 98 55-167 4-107 (108)
2 3hui_A Ferredoxin; cytochrome 99.8 4.6E-21 1.6E-25 149.6 9.2 104 51-169 15-123 (126)
3 3lxf_A Ferredoxin; iron, iron- 99.8 4.3E-21 1.5E-25 144.3 8.4 95 59-168 2-101 (104)
4 2y5c_A Adrenodoxin-like protei 99.8 8E-21 2.7E-25 143.1 8.1 97 57-168 5-105 (109)
5 3ah7_A [2Fe-2S]ferredoxin; [2F 99.8 1.8E-20 6.3E-25 141.8 8.6 83 76-169 17-102 (113)
6 3n9z_C Adrenodoxin; cytochrome 99.8 1.3E-21 4.6E-26 152.0 0.1 101 55-170 3-109 (123)
7 2wlb_A ETP1-FD, electron trans 99.8 8.7E-20 3E-24 135.8 8.7 97 56-167 2-102 (103)
8 1uwm_A Ferredoxin VI, FDVI; el 99.8 7E-20 2.4E-24 137.0 7.9 85 76-169 13-103 (106)
9 1xlq_A Putidaredoxin, PDX; [2F 99.8 1.6E-19 5.5E-24 135.0 9.7 84 76-168 13-102 (106)
10 1b9r_A Protein (terpredoxin); 99.8 2.7E-20 9.1E-25 139.0 2.9 85 76-169 13-103 (105)
11 1l5p_A Ferredoxin; [2Fe-2S] cl 99.8 3.8E-19 1.3E-23 130.6 7.9 79 76-164 12-91 (93)
12 1i7h_A Ferredoxin; 2Fe-2S,elec 99.8 7.3E-19 2.5E-23 132.7 8.5 83 76-169 17-102 (111)
13 1czp_A Ferredoxin I; [2Fe-2S] 99.7 8.6E-17 2.9E-21 118.7 5.9 78 76-171 16-95 (98)
14 1frd_A Heterocyst [2Fe-2S] fer 99.7 9.7E-17 3.3E-21 118.1 6.1 78 76-171 16-95 (98)
15 1awd_A Ferredoxin; electron tr 99.7 1.1E-16 3.9E-21 117.2 6.3 79 76-172 12-92 (94)
16 1iue_A Ferredoxin; electron tr 99.6 1.9E-16 6.5E-21 117.0 6.8 80 76-173 14-95 (98)
17 1a70_A Ferredoxin; iron-sulfur 99.6 1.3E-16 4.6E-21 117.6 5.7 78 76-171 14-93 (97)
18 1frr_A Ferredoxin I; electron 99.6 1.8E-16 6.2E-21 115.7 6.1 77 76-170 13-91 (95)
19 1jq4_A Methane monooxygenase c 99.6 2.3E-17 8E-22 121.6 1.0 91 57-169 4-96 (98)
20 1wri_A Ferredoxin II, ferredox 99.6 2E-16 6.8E-21 115.9 5.4 77 76-171 13-91 (93)
21 1krh_A Benzoate 1,2-dioxygenas 99.6 1.4E-15 4.6E-20 132.1 6.1 81 76-170 16-98 (338)
22 1doi_A 2Fe-2S ferredoxin; halo 99.5 6.3E-15 2.1E-19 114.9 4.8 72 77-166 39-114 (128)
23 3zyy_X Iron-sulfur cluster bin 99.5 8.5E-15 2.9E-19 139.8 5.2 91 56-172 2-94 (631)
24 2pia_A Phthalate dioxygenase r 99.4 2.1E-13 7.3E-18 118.2 9.5 71 77-166 248-320 (321)
25 2bs2_B Quinol-fumarate reducta 98.9 2.2E-09 7.4E-14 89.9 6.5 88 57-169 6-95 (241)
26 1kf6_B Fumarate reductase iron 98.7 1.4E-08 4.6E-13 85.0 6.3 89 57-170 7-95 (243)
27 2wdq_B Succinate dehydrogenase 98.7 2.1E-08 7.1E-13 83.7 6.5 88 57-169 4-95 (238)
28 3vr8_B Iron-sulfur subunit of 98.7 3.8E-08 1.3E-12 85.8 7.5 92 56-171 36-129 (282)
29 2h88_B Succinate dehydrogenase 98.6 5E-08 1.7E-12 82.6 6.2 89 57-170 13-104 (252)
30 1t3q_A Quinoline 2-oxidoreduct 98.3 2.1E-07 7.1E-12 75.1 2.5 63 76-169 21-87 (168)
31 3i9v_3 NADH-quinone oxidoreduc 98.0 6.6E-06 2.3E-10 79.7 6.6 66 77-155 10-88 (783)
32 1rm6_C 4-hydroxybenzoyl-COA re 98.0 2.8E-06 9.6E-11 68.3 2.6 64 76-169 14-80 (161)
33 3c8y_A Iron hydrogenase 1; dit 97.7 4.8E-05 1.7E-09 71.4 7.2 58 76-155 9-67 (574)
34 1n62_A Carbon monoxide dehydro 97.6 1.9E-05 6.5E-10 63.9 2.7 64 76-169 15-81 (166)
35 1ffv_A CUTS, iron-sulfur prote 97.6 2.2E-05 7.6E-10 63.3 2.8 64 76-169 15-81 (163)
36 3hrd_D Nicotinate dehydrogenas 97.6 1.8E-05 6.1E-10 63.9 2.0 64 76-169 15-81 (160)
37 1vlb_A Aldehyde oxidoreductase 96.6 0.0007 2.4E-08 67.0 2.3 66 76-170 13-81 (907)
38 1dgj_A Aldehyde oxidoreductase 96.6 0.00074 2.5E-08 66.8 2.4 66 76-170 13-81 (907)
39 2w3s_A Xanthine dehydrogenase; 96.3 0.001 3.6E-08 61.2 1.2 68 76-169 12-82 (462)
40 3nvw_A Xanthine dehydrogenase/ 95.1 0.02 6.8E-07 46.2 4.3 39 77-122 16-55 (164)
41 1y56_A Hypothetical protein PH 91.4 0.21 7.2E-06 45.0 5.1 55 55-122 13-67 (493)
42 3kwl_A Uncharacterized protein 88.6 0.45 1.5E-05 44.0 4.9 53 58-126 27-79 (514)
43 2gag_A Heterotetrameric sarcos 87.2 0.75 2.6E-05 45.3 5.8 55 55-122 20-79 (965)
44 1ep3_B Dihydroorotate dehydrog 83.0 0.7 2.4E-05 37.9 2.9 31 91-122 209-239 (262)
45 3unc_A Xanthine dehydrogenase/ 81.5 1.4 4.7E-05 45.4 4.9 38 79-122 19-56 (1332)
46 3u7z_A Putative metal binding 59.3 15 0.00051 27.0 4.9 39 55-100 6-44 (101)
47 3zyv_A AOH1; oxidoreductase, m 54.7 12 0.0004 38.6 4.8 38 79-122 23-60 (1335)
48 2l32_A Small archaeal modifier 22.0 82 0.0028 21.2 3.3 23 76-99 13-35 (74)
49 3kdv_A DDRB, DNA damage respon 20.7 1E+02 0.0035 24.8 4.0 35 54-95 4-38 (184)
No 1
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=99.85 E-value=1.6e-21 Score=146.54 Aligned_cols=98 Identities=24% Similarity=0.426 Sum_probs=79.3
Q ss_pred CCcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccc--cccCcccCCCCceeccCcEEEEccCc-ccCCCC
Q 029369 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELY--ATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNER 131 (194)
Q Consensus 55 ~~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~--~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~ 131 (194)
..+++|+|..+. |. .++|++++|+||| ++|+++||+++ + .|+|.|.||||+|+|.+|+ ..++++
T Consensus 4 ~~m~~V~~~~~~----g~--~~~v~~~~g~tLL-~aa~~~gi~i~~~~------~Cgg~G~CgtC~v~v~~g~~~~l~~~ 70 (108)
T 2bt6_A 4 GDKITVHFINRD----GE--TLTTKGKIGDSLL-DVVVQNNLDIDGFG------ACEGTLACSTCHLIFEQHIFEKLEAI 70 (108)
T ss_dssp -CEEEEEEECTT----SC--EEEEEEETTCBHH-HHHHHTTCCCTTTT------TTSSSSSBSTTEEECCHHHHTTSCCC
T ss_pred CceEEEEEECCC----CC--EEEEEECCCChHH-HHHHHcCCCCCccc------CCCCCcCcCCCEEEECccccccCCCC
Confidence 356778887543 32 2578999999999 99999999999 7 6999999999999999996 567888
Q ss_pred ChHHHhccCC---CCCCeEEeeeeEeccccCCccEEEEe
Q 029369 132 TNTELRYLKK---KPESWRLACQTIVGNKENSGKVCSRT 167 (194)
Q Consensus 132 t~~E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~i~~ 167 (194)
++.|.++|+. ..+||||+||+++. ++++ +++|+.
T Consensus 71 ~~~E~~~L~~~~~~~~g~rLaCq~~~~-~d~d-~~~V~~ 107 (108)
T 2bt6_A 71 TDEENDMLDLAYGLTDRSRLGCQICLT-KAMD-NMTVRV 107 (108)
T ss_dssp CHHHHHHHTTCTTCCTTEEEGGGCBCC-GGGT-TEEEEC
T ss_pred CHHHHHHHhCcccCCCCcEeeEEEEec-CCCC-CEEEEc
Confidence 9999999985 37899999999987 3333 466654
No 2
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=99.84 E-value=4.6e-21 Score=149.62 Aligned_cols=104 Identities=22% Similarity=0.348 Sum_probs=84.4
Q ss_pred CCCCCCcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCc-cccccCcccCCCCceeccCcEEEEccCc-ccC
Q 029369 51 PEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLL 128 (194)
Q Consensus 51 ~~~~~~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l 128 (194)
.+.+..+++|+|.++. |. .++|++++|+||| ++|+++||+ +++ .|+|.|.||||+|+|.+|+ ..+
T Consensus 15 ~~~~~~M~~Vt~~~~~----G~--~~~v~~~~G~tLL-~aa~~~gi~gi~~------~C~G~G~CgtC~v~v~~G~~~~l 81 (126)
T 3hui_A 15 VPRGSHMAKINFVDHT----GE--TRTVEVEEGATVM-EAAIRNAIPGVEA------ECGGACACATCHVYVDEAWREKV 81 (126)
T ss_dssp CCTTCSEEEEEEECTT----SC--EEEEEEETTSBHH-HHHHTTTCTTCCC------TTSSSSCCSTTEEEECGGGHHHH
T ss_pred cCCCCCceEEEEEeCC----CC--EEEEEECCCCcHH-HHHHHcCCCCCcc------CCCCCCCCCCCEEEECCCccccc
Confidence 4455677788888653 32 2578999999999 999999999 997 6999999999999999997 457
Q ss_pred CCCChHHHhccCC---CCCCeEEeeeeEeccccCCccEEEEecc
Q 029369 129 NERTNTELRYLKK---KPESWRLACQTIVGNKENSGKVCSRTMF 169 (194)
Q Consensus 129 ~~~t~~E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~i~~~~ 169 (194)
+++++.|.++|+. .++||||+||+++. .|++| ++|+.+.
T Consensus 82 ~~~~~~E~~~L~~~~e~~~g~RLaCQ~~~~-~dldg-l~V~lp~ 123 (126)
T 3hui_A 82 GGPSPMEEDMLDFGYDVRPNSRLSCQIKVS-NELDG-LIVTTPE 123 (126)
T ss_dssp CCCCHHHHHHHTTSSSCCTTEEEGGGCBCC-GGGTT-EEEECCS
T ss_pred CCCCHHHhhhcCchhhccCCeEEeeeCEEC-cCCCc-EEEEecC
Confidence 8889999999984 37899999999997 45444 6676554
No 3
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=99.84 E-value=4.3e-21 Score=144.33 Aligned_cols=95 Identities=26% Similarity=0.404 Sum_probs=78.5
Q ss_pred EEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCc-cccccCcccCCCCceeccCcEEEEccCc-ccCCCCChHHH
Q 029369 59 ELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTEL 136 (194)
Q Consensus 59 ~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~ 136 (194)
+|+|++++ |. .+++++++|+||| ++|+++|++ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.
T Consensus 2 ~vt~~~~~----G~--~~~~~~~~g~tll-~a~~~~gi~~i~~------~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~ 68 (104)
T 3lxf_A 2 AILVTTRD----GT--RTEIQAEPGLSLM-EALRDAGIDELLA------LCGGCCSCATCHVLVAPAFADRLPALSGDEN 68 (104)
T ss_dssp EEEEECTT----SC--EEEEECCTTSBHH-HHHHHTTCTTCCC------TTCSSSSCSTTEEEECGGGGGGSCCCCHHHH
T ss_pred EEEEEeCC----CC--EEEEEECCCChHH-HHHHHcCCCCCCc------CCCCCCCCCCCEEEECCcccccCCCCCHHHH
Confidence 46677653 43 3678999999999 999999999 997 6999999999999999997 46788899999
Q ss_pred hccCC---CCCCeEEeeeeEeccccCCccEEEEec
Q 029369 137 RYLKK---KPESWRLACQTIVGNKENSGKVCSRTM 168 (194)
Q Consensus 137 ~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~i~~~ 168 (194)
++|+. ..+||||+||+++. .|++| ++|+.|
T Consensus 69 ~~L~~~~~~~~g~rLaCq~~~~-~dl~g-l~v~ip 101 (104)
T 3lxf_A 69 DLLDSSDHRTPHSRLSCQITIN-DKLEG-LEVEIA 101 (104)
T ss_dssp HHHHTSTTCCTTEEEGGGCBCC-GGGTT-CEEEEC
T ss_pred HHhccccccCCCcEEEeeCEEc-cCCCC-EEEEec
Confidence 99976 37899999999997 55555 556554
No 4
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=99.83 E-value=8e-21 Score=143.13 Aligned_cols=97 Identities=23% Similarity=0.370 Sum_probs=78.6
Q ss_pred cEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCc-ccCCCCChHH
Q 029369 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTE 135 (194)
Q Consensus 57 ~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E 135 (194)
+++|+|..+. |. .++|.+++|+||| ++++++||++++ .|+|.|.||||+|+|.+|+ ..++++++.|
T Consensus 5 m~~v~~~~~~----g~--~~~~~~~~g~tlL-~aa~~~gi~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~E 71 (109)
T 2y5c_A 5 VVNVVFVDRS----GQ--RIPVSGRVGDNVL-HLAQRHGVDLEG------ACEASLACSTCHVYVSEDHLDLLPPPEERE 71 (109)
T ss_dssp EEEEEEECTT----SC--EEEEEEETTCBHH-HHHHHTTCCCCC------TTSSSSSCCTTEEEECHHHHTTSCCCCHHH
T ss_pred cEEEEEEcCC----CC--EEEEEECCCCcHH-HHHHHcCCCCCc------CCCCCcCcCccEEEECCcchhhcCCCCHHH
Confidence 5677787543 32 2568899999999 999999999998 6998899999999999996 5678889999
Q ss_pred HhccCC---CCCCeEEeeeeEeccccCCccEEEEec
Q 029369 136 LRYLKK---KPESWRLACQTIVGNKENSGKVCSRTM 168 (194)
Q Consensus 136 ~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~i~~~ 168 (194)
.++|+. .++||||+||+++. .++++ ++|+.+
T Consensus 72 ~~~L~~~~~~~~g~rLaCq~~~~-~d~~~-~~v~ip 105 (109)
T 2y5c_A 72 DDMLDMAPLLQENSRLGCQIVLT-PELEG-AEFTLP 105 (109)
T ss_dssp HHHHHTSTTCCTTEEEGGGCBCC-GGGTT-CEEECC
T ss_pred HHHHhccccCCCCcEeeEEeEEe-cCCCe-EEEEec
Confidence 999973 37999999999987 33332 666654
No 5
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=99.82 E-value=1.8e-20 Score=141.79 Aligned_cols=83 Identities=28% Similarity=0.430 Sum_probs=73.6
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCC---CCCCeEEeeee
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQT 152 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLaCQ~ 152 (194)
++|.+++|+||| ++|+++||++++ .|+|.|.||+|+|+|.+|++.++++++.|..+|+. ..++|||+||+
T Consensus 17 ~~v~~~~g~tlL-~aa~~~Gi~i~~------~C~g~G~CgtC~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~ 89 (113)
T 3ah7_A 17 LTVEVKPGTNIL-ELAHDHHIEMES------ACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQSRLGCQV 89 (113)
T ss_dssp EEEECCTTCBHH-HHHHHTTCCCCC------TTCSSSSCSTTEEEEEESGGGSCCCCHHHHHHHTTSTTCCTTEEEGGGC
T ss_pred eEEEECCCCcHH-HHHHHcCCCCCc------CCCCCCCcCCCEEEEcCCcccCCCCCHHHHHhhhcccccCCCcEEeeeC
Confidence 578999999999 999999999998 69989999999999999987888889999999974 47899999999
Q ss_pred EeccccCCccEEEEecc
Q 029369 153 IVGNKENSGKVCSRTMF 169 (194)
Q Consensus 153 ~v~~~e~~gdv~i~~~~ 169 (194)
++. +++++|+.+.
T Consensus 90 ~~~----~~dl~v~~~~ 102 (113)
T 3ah7_A 90 FVA----DEDLTIEIPK 102 (113)
T ss_dssp BCC----SSCEEEECCS
T ss_pred EEe----CCCEEEEECc
Confidence 985 3688888654
No 6
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=99.81 E-value=1.3e-21 Score=152.00 Aligned_cols=101 Identities=25% Similarity=0.422 Sum_probs=25.2
Q ss_pred CCcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccc--cccCcccCCCCceeccCcEEEEccC-cccCCCC
Q 029369 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELY--ATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNER 131 (194)
Q Consensus 55 ~~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~--~~~~~~~~C~G~G~CGTC~V~V~~G-~~~l~~~ 131 (194)
+.+++|+|++++ |. .++|++++|+||| ++++++||+++ + .|+|.|.||||||+|.+| ...++++
T Consensus 3 ~~~v~Vtf~~~~----G~--~~~v~~~~G~tLl-~aa~~~gi~i~g~~------~CgG~g~CgtC~v~v~~~~~~~l~~~ 69 (123)
T 3n9z_C 3 EDKITVHFINRD----GE--TLTTKGKVGDSLL-DVVVENNLDIDGFG------ACEGTLACSTCHLIFEDHIYEKLDAI 69 (123)
T ss_dssp -----------------------------------------------C------TTCSSSSCSTTBC-------------
T ss_pred CCcEEEEEEeCC----CC--EEEEEECCCCcHH-HHHHHcCCCCCcCC------CCCCCCEeCCCeeEEeccccccCCCC
Confidence 457778887653 32 2567899999999 99999999998 6 699999999999999975 4678888
Q ss_pred ChHHHhccCC---CCCCeEEeeeeEeccccCCccEEEEecch
Q 029369 132 TNTELRYLKK---KPESWRLACQTIVGNKENSGKVCSRTMFL 170 (194)
Q Consensus 132 t~~E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~i~~~~~ 170 (194)
++.|.++|+. ..++|||+||+.+. ++++ +++|+.|..
T Consensus 70 ~~~E~~~L~~~~~~~~~~RLaCQ~~v~-~~ld-~l~V~ip~~ 109 (123)
T 3n9z_C 70 TDEENDMLDLAYGLTDRSRLGCQICLT-KSMD-NMTVRVPET 109 (123)
T ss_dssp -CHHHHHHCC--------CBCC--------------------
T ss_pred ChHHHhhhcccccccCCeEEeeEeEEc-cCCC-CEEEEECcc
Confidence 9999999985 36899999999997 4443 456665433
No 7
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=99.80 E-value=8.7e-20 Score=135.82 Aligned_cols=97 Identities=28% Similarity=0.504 Sum_probs=77.7
Q ss_pred CcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCc-ccCCCCChH
Q 029369 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNT 134 (194)
Q Consensus 56 ~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~ 134 (194)
+.++|+|..+ +|. .+++.+.+|+||| ++|+++|+++++ .|+|.|.||+|+|+|.+|+ ..++++++.
T Consensus 2 ~~~~v~~~~~----~g~--~~~~~~~~g~tlL-~a~~~~gi~i~~------~C~g~G~Cg~C~v~v~~g~~~~~~~~~~~ 68 (103)
T 2wlb_A 2 TGIKVFFVTP----EGR--EIMIEGNEGDSIL-DLAHANNIDLEG------ACEGSVACSTCHVIVDPEHYELLDPPEED 68 (103)
T ss_dssp CCEEEEEECT----TCC--EEEEEECTTCBHH-HHHHHTTCCCCC------TTTTSSCCSTTEEEECHHHHHHSCCCCHH
T ss_pred CceEEEEEeC----CCC--EEEEEECCCCHHH-HHHHHcCCCcCc------CCCCCCCcCCCEEEECCCchhccCCCCHH
Confidence 3567777643 232 2578899999999 999999999997 6999999999999999997 456788899
Q ss_pred HHhccCC---CCCCeEEeeeeEeccccCCccEEEEe
Q 029369 135 ELRYLKK---KPESWRLACQTIVGNKENSGKVCSRT 167 (194)
Q Consensus 135 E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~i~~ 167 (194)
|.++|+. .+++|||+||+++. .++++ ++|+.
T Consensus 69 E~~~L~~~~~~~~g~rLaCq~~~~-~d~~~-l~v~l 102 (103)
T 2wlb_A 69 EEDMLDLAFGLEETSRLGCQVLLR-KDLDG-IRVRI 102 (103)
T ss_dssp HHHHHTTBTTCCTTEEEGGGCBCC-GGGTT-EEEEC
T ss_pred HHHHHhcccCCCCCcEeeEeeEeC-CCCCc-EEEEc
Confidence 9999987 37899999999986 33333 67764
No 8
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=99.80 E-value=7e-20 Score=136.96 Aligned_cols=85 Identities=24% Similarity=0.315 Sum_probs=72.3
Q ss_pred EEEEecCCchHHHHHHHHCCCc-cccccCcccCCCCceeccCcEEEEccCc-ccCCCCChHHHhccCCC---C-CCeEEe
Q 029369 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLKKK---P-ESWRLA 149 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~~~---~-~g~RLa 149 (194)
+++.+++|+||| ++|+++||+ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.++|+.. . ++|||+
T Consensus 13 ~~~~~~~g~tlL-~aa~~~gi~~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (106)
T 1uwm_A 13 HEVEAKPGLTVM-EAARDNGVPGIDA------DCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLT 85 (106)
T ss_dssp EEEECCTTSBHH-HHHHTTTCTTCCC------TTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTTTEEEG
T ss_pred EEEEECCCCcHH-HHHHHcCCCCccc------CCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhcCccccCCCCcEec
Confidence 578999999999 999999999 997 6998999999999999996 56788899999999863 5 899999
Q ss_pred eeeEeccccCCccEEEEecc
Q 029369 150 CQTIVGNKENSGKVCSRTMF 169 (194)
Q Consensus 150 CQ~~v~~~e~~gdv~i~~~~ 169 (194)
||+++. .+++ +++|+.+.
T Consensus 86 Cq~~~~-~d~~-~l~v~~p~ 103 (106)
T 1uwm_A 86 CQIKVT-SLLD-GLVVHLPE 103 (106)
T ss_dssp GGCBCC-GGGT-TEEEECCS
T ss_pred ccCEEc-cCCC-CEEEEecC
Confidence 999986 3332 47777543
No 9
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=99.80 E-value=1.6e-19 Score=135.02 Aligned_cols=84 Identities=25% Similarity=0.447 Sum_probs=71.8
Q ss_pred EEEEecCCchHHHHHHHHCCCc-cccccCcccCCCCceeccCcEEEEccCc-ccCCCCChHHHhccCC---C-CCCeEEe
Q 029369 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLKK---K-PESWRLA 149 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~~---~-~~g~RLa 149 (194)
+++.+++|+||| ++|+++||+ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.++|+. . .++|||+
T Consensus 13 ~~~~~~~g~tlL-eaa~~~gi~~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (106)
T 1xlq_A 13 RELDVADGVSLM-QAAVSNGIYDIVG------DCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLC 85 (106)
T ss_dssp EEEECCTTCBHH-HHHHHTTCTTSCC------TTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCCCTTEEEG
T ss_pred EEEEECCCCcHH-HHHHHcCCCCCCc------CCCCCcccCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 578999999999 999999999 997 6998999999999999996 5678888999999985 3 7899999
Q ss_pred eeeEeccccCCccEEEEec
Q 029369 150 CQTIVGNKENSGKVCSRTM 168 (194)
Q Consensus 150 CQ~~v~~~e~~gdv~i~~~ 168 (194)
||+++. .+++ +++|+.+
T Consensus 86 Cq~~~~-~d~~-~l~v~~p 102 (106)
T 1xlq_A 86 CQIIMT-PELD-GIVVDVP 102 (106)
T ss_dssp GGCBCC-GGGT-TEEEECC
T ss_pred eeeEee-cCCC-CEEEEec
Confidence 999986 3332 5777754
No 10
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=99.79 E-value=2.7e-20 Score=139.05 Aligned_cols=85 Identities=26% Similarity=0.478 Sum_probs=71.6
Q ss_pred EEEEecCCchHHHHHHHHCCCc-cccccCcccCCCCceeccCcEEEEccCc-ccCCCCChHHHhccC--C--CCCCeEEe
Q 029369 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLK--K--KPESWRLA 149 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~--~--~~~g~RLa 149 (194)
+++.+++|+||| ++|+++||+ +++ .|+|.|.||||+|+|.+|+ ..++++++.|.++|+ . .++||||+
T Consensus 13 ~~~~~~~g~tlL-~aa~~~gi~~i~~------~C~g~G~CgtC~v~v~~G~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (105)
T 1b9r_A 13 YAVDAQDGQSLM-EVATQNGVPGIVA------ECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLS 85 (105)
T ss_dssp EEEECCTTCCTT-HHHHHHTCCCCCC------SSTTSSCCCCCCCEECTTTHHHHTCCCTTHHHHHHTSCCCCCTTBSCG
T ss_pred EEEEECCCChHH-HHHHHcCCCCcCc------CCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 578999999999 999999999 997 6999999999999999996 456778888999998 3 37899999
Q ss_pred eeeEeccccCCccEEEEecc
Q 029369 150 CQTIVGNKENSGKVCSRTMF 169 (194)
Q Consensus 150 CQ~~v~~~e~~gdv~i~~~~ 169 (194)
||+++. .+++ +++|+.+.
T Consensus 86 Cq~~~~-~~~~-~l~v~~p~ 103 (105)
T 1b9r_A 86 CQVFID-PSMD-GLIVRVPL 103 (105)
T ss_dssp GGCCCC-TTST-TEEEECCS
T ss_pred eeCEec-CCCC-cEEEEecC
Confidence 999986 3332 57787653
No 11
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=99.78 E-value=3.8e-19 Score=130.60 Aligned_cols=79 Identities=27% Similarity=0.556 Sum_probs=70.0
Q ss_pred EEEEecCCchHHHHHHHHCCCc-cccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 029369 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (194)
+++++++|+||| ++|+++|++ +++ .|+|.|.||+|+|+|.+|.. +++++.|.++|++.+++|||+||+++
T Consensus 12 ~~~~~~~g~tll-~a~~~~gi~gi~~------~C~G~G~Cg~C~v~v~~g~~--~~~~~~e~~~L~~~~~g~rLaCq~~~ 82 (93)
T 1l5p_A 12 KQLKFEDDQTLF-TVLTEAGLMSADD------TCQGNKACGKCICKHVSGKV--AAAEDDEKEFLEDQPANARLACAITL 82 (93)
T ss_dssp EEEECCTTEEHH-HHHHTTTSSCCTT------SCSSSSSSCCCEEEEEESCC--CCCCHHHHHHHTTSCTTEEEGGGCEE
T ss_pred EEEEECCCChHH-HHHHHcCCCcCCc------CCCCcCCcCCCEEEECCCcC--CCCCHHHHHHhcCCCCCcEEeeECEE
Confidence 578999999999 999999999 987 69999999999999999864 56778899999966899999999999
Q ss_pred ccccCCccEE
Q 029369 155 GNKENSGKVC 164 (194)
Q Consensus 155 ~~~e~~gdv~ 164 (194)
. .+++|.++
T Consensus 83 ~-~d~~g~~v 91 (93)
T 1l5p_A 83 S-GENDGAVF 91 (93)
T ss_dssp C-GGGTTCEE
T ss_pred C-CCCCceEE
Confidence 8 78888654
No 12
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=99.77 E-value=7.3e-19 Score=132.74 Aligned_cols=83 Identities=30% Similarity=0.394 Sum_probs=73.0
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCC---CCCCeEEeeee
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQT 152 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLaCQ~ 152 (194)
+++.+++|+||| ++|+++|+++++ .|+|.|.||+|+|+|.+|++.+.+++..|.++|+. ..+++||+||+
T Consensus 17 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~~~G~Cg~C~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~ 89 (111)
T 1i7h_A 17 AVLEANSGETIL-DAALRNGIEIEH------ACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQA 89 (111)
T ss_dssp EEEECCTTCBHH-HHHHHTTCCCCC------TTSSSSCCSTTEEEEEECGGGSCCCCHHHHHHHTTCTTCCTTEEETTTC
T ss_pred eEEEeCCCCcHH-HHHHHcCCCCcc------cCCCCCcCCCCEEEEccCcccCCCCCHHHHHHhhhccccCCCcEEEEEE
Confidence 578899999999 999999999997 69889999999999999998888888999999985 36899999999
Q ss_pred EeccccCCccEEEEecc
Q 029369 153 IVGNKENSGKVCSRTMF 169 (194)
Q Consensus 153 ~v~~~e~~gdv~i~~~~ 169 (194)
++. .++++|+.+.
T Consensus 90 ~~~----~~dl~v~~~~ 102 (111)
T 1i7h_A 90 RVT----DEDLVVEIPR 102 (111)
T ss_dssp BCC----SSCEEEECCS
T ss_pred EEe----CCCEEEEECh
Confidence 984 3688888653
No 13
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=99.66 E-value=8.6e-17 Score=118.73 Aligned_cols=78 Identities=18% Similarity=0.337 Sum_probs=64.7
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++.+++|+||| ++++++|+++++ .|+ .|.||+|+|+|.+|+... .|...|+.. ++|+||+||++
T Consensus 16 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 82 (98)
T 1czp_A 16 HEIEVPDDEYIL-DAAEEQGYDLPF------SCR-AGACSTCAGKLVSGTVDQ-----SDQSFLDDDQIEAGYVLTCVAY 82 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCCHH-HHHHHcCCCccC------CCC-CCCCCCCeEEEccCCcCc-----cccccCCHHHhhCCeEEeeeCE
Confidence 567899999999 999999999997 698 999999999999998542 344566542 58899999999
Q ss_pred eccccCCccEEEEecchh
Q 029369 154 VGNKENSGKVCSRTMFLL 171 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~~ 171 (194)
+. +|++|+.+...
T Consensus 83 ~~-----~d~~v~~~~~~ 95 (98)
T 1czp_A 83 PT-----SDVVIQTHKEE 95 (98)
T ss_dssp ES-----SCEEEECCCTT
T ss_pred EC-----CCEEEEecccc
Confidence 86 78999876554
No 14
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=99.66 E-value=9.7e-17 Score=118.10 Aligned_cols=78 Identities=21% Similarity=0.357 Sum_probs=64.6
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++.+++|+||| ++|+++||++++ .|+ .|.||+|+|+|.+|.+.. .|...|+.. ++|+||+||++
T Consensus 16 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaC~~~ 82 (98)
T 1frd_A 16 TTIEIDEETTIL-DGAEENGIELPF------SCH-SGSCSSCVGKVVEGEVDQ-----SDQIFLDDEQMGKGFALLCVTY 82 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CCCCCCCEEEEEeCCccc-----cccccCCHHHhhCCcEEEeECE
Confidence 578899999999 999999999998 698 999999999999998542 344566653 58899999999
Q ss_pred eccccCCccEEEEecchh
Q 029369 154 VGNKENSGKVCSRTMFLL 171 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~~ 171 (194)
+. +|++|+.+...
T Consensus 83 ~~-----~d~~v~~~~~~ 95 (98)
T 1frd_A 83 PR-----SNCTIKTHQEP 95 (98)
T ss_dssp ES-----SSEEEECCCGG
T ss_pred EC-----CCEEEEecchh
Confidence 86 78899876543
No 15
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=99.65 E-value=1.1e-16 Score=117.23 Aligned_cols=79 Identities=16% Similarity=0.302 Sum_probs=65.5
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++.+++|+||| ++|+++|+.+++ .|+ .|.||+|+|+|.+|.... .|..+|+.. ++|+||+||++
T Consensus 12 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 78 (94)
T 1awd_A 12 ETIECPEDTYIL-DAAEEAGLDLPY------SCR-AGACSSCAGKVESGEVDQ-----SDQSFLDDAQMGKGFVLTCVAY 78 (94)
T ss_dssp EEEECCTTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEECCCCcHH-HHHHHcCCCCCc------CCC-CCcCCCCEEEEEeCCcCc-----cccccCCHHHHhCCcEEeeECE
Confidence 568899999999 999999999997 698 999999999999998542 345566642 58899999999
Q ss_pred eccccCCccEEEEecchhh
Q 029369 154 VGNKENSGKVCSRTMFLLN 172 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~~~ 172 (194)
+. +|++|+.+....
T Consensus 79 ~~-----~d~~i~~~~~~~ 92 (94)
T 1awd_A 79 PT-----SDVTILTHQEAA 92 (94)
T ss_dssp ES-----SCEEEECCCGGG
T ss_pred EC-----CCEEEEecchhc
Confidence 96 789998766543
No 16
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=99.65 E-value=1.9e-16 Score=117.02 Aligned_cols=80 Identities=23% Similarity=0.409 Sum_probs=66.1
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.+.. .|...|+.. ++|+||+||++
T Consensus 14 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 80 (98)
T 1iue_A 14 KKIECNEDEYIL-DASERQNVELPY------SCR-GGSCSTCAAKLVEGEVDN-----DDQSYLDEEQIKKKYILLCTCY 80 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSC-SSSSSTTEEEEEESCEEC-----TTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCCCC------CCC-CCcCCCCEEEEeeCCccc-----cccccCCHHHHhCCeEEEeECE
Confidence 568899999999 999999999997 698 999999999999998532 345566642 58899999999
Q ss_pred eccccCCccEEEEecchhhH
Q 029369 154 VGNKENSGKVCSRTMFLLNL 173 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~~~~ 173 (194)
+. +|++|+.+.....
T Consensus 81 ~~-----~d~~i~~~~~~~~ 95 (98)
T 1iue_A 81 PK-----SDCVIETHKEDEL 95 (98)
T ss_dssp ES-----SCEEEECCCHHHH
T ss_pred EC-----CCeEEEeCChHhh
Confidence 96 7899988765543
No 17
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=99.64 E-value=1.3e-16 Score=117.62 Aligned_cols=78 Identities=21% Similarity=0.341 Sum_probs=64.8
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.+.. .|...|+.. ++|+||+||++
T Consensus 14 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 80 (97)
T 1a70_A 14 VEFQCPDDVYIL-DAAEEEGIDLPY------SCR-AGSCSSCAGKLKTGSLNQ-----DDQSFLDDDQIDEGWVLTCAAY 80 (97)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSCSSTTEEEEEESCEEC-----TTCCSSCHHHHHHTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CcCCCCCeEEEccCCcCc-----cccccCCHHHhhCCeEEEeECE
Confidence 568899999999 999999999997 698 999999999999998542 345566642 57899999999
Q ss_pred eccccCCccEEEEecchh
Q 029369 154 VGNKENSGKVCSRTMFLL 171 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~~ 171 (194)
+. +|++|+.+...
T Consensus 81 ~~-----~d~~v~~~~~~ 93 (97)
T 1a70_A 81 PV-----SDVTIETHKKE 93 (97)
T ss_dssp ES-----SCEEEECCCGG
T ss_pred EC-----CCEEEEeCchh
Confidence 96 77999876544
No 18
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.64 E-value=1.8e-16 Score=115.71 Aligned_cols=77 Identities=19% Similarity=0.357 Sum_probs=63.9
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.+.. .|...|++. ++|+||+||++
T Consensus 13 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~~~~~L~~~~~~~g~~LaC~~~ 79 (95)
T 1frr_A 13 FTLDVPEGTTIL-DAAEEAGYDLPF------SCR-AGACSSCLGKVVSGSVDE-----SEGSFLDDGQMEEGFVLTCIAI 79 (95)
T ss_dssp EEEEECTTCCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEETTTCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCCCC------CCC-CcCCCCCEEEEEeCCccc-----cccccCCHHHHhCCcEEeeECE
Confidence 578899999999 999999999998 698 999999999999998543 244566542 57899999999
Q ss_pred eccccCCccEEEEecch
Q 029369 154 VGNKENSGKVCSRTMFL 170 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~ 170 (194)
+. ++++|+.+..
T Consensus 80 ~~-----~~~~v~~~~~ 91 (95)
T 1frr_A 80 PE-----SDLVIETHKE 91 (95)
T ss_dssp ES-----SCEEEECCCT
T ss_pred EC-----CCEEEEEcch
Confidence 86 6888887654
No 19
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=99.64 E-value=2.3e-17 Score=121.61 Aligned_cols=91 Identities=21% Similarity=0.316 Sum_probs=69.8
Q ss_pred cEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHH
Q 029369 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTEL 136 (194)
Q Consensus 57 ~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~ 136 (194)
.++|+|..++ + ..+++.+++|+||| ++|+++|+++++ .| |.|.||+|+|+|.+|++.+. +.|.
T Consensus 4 ~~~v~~~~~~----~--~~~~~~~~~g~tlL-~a~~~~gi~i~~------~C-~~G~Cg~C~v~v~~G~~~~~---~~e~ 66 (98)
T 1jq4_A 4 VHTITAVTED----G--ESLRFECRSDEDVI-TAALRQNIFLMS------SC-REGGCATCKALCSEGDYDLK---GCSV 66 (98)
T ss_dssp EEEEEEEETT----T--EEEEEEEESCCTHH-HHHHHHTCCCCC------SC-CSSCCCCCCBCEEECCCCCC---CSCT
T ss_pred cEEEEEEecC----C--CcEEEEeCCCChHH-HHHHHcCCCCcC------CC-CCCCCCCCEEEEEcCccccC---cccc
Confidence 4566666332 1 12578899999999 999999999997 69 59999999999999986442 2456
Q ss_pred hccCCC--CCCeEEeeeeEeccccCCccEEEEecc
Q 029369 137 RYLKKK--PESWRLACQTIVGNKENSGKVCSRTMF 169 (194)
Q Consensus 137 ~~L~~~--~~g~RLaCQ~~v~~~e~~gdv~i~~~~ 169 (194)
..|+.. ++|+||+||+++. +|++|+.++
T Consensus 67 ~~L~~~~~~~g~~LaCq~~~~-----~d~~v~~~~ 96 (98)
T 1jq4_A 67 QALPPEEEEEGLVLLCRTYPK-----TDLEIELPY 96 (98)
T ss_dssp TTSCHHHHHHHCBCTTTCCSS-----CCSEEECSC
T ss_pred cccCHHHhcCCcEEEeeCEEC-----CCEEEEecC
Confidence 677653 5789999999986 678887653
No 20
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.63 E-value=2e-16 Score=115.88 Aligned_cols=77 Identities=25% Similarity=0.419 Sum_probs=64.0
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++.+++|+||| ++|+++| .+++ .|+ .|.||+|+|+|.+|.+.. .|...|+.. ++||||+||++
T Consensus 13 ~~~~~~~g~tlL-~a~~~~g-~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~~~~~g~~LaCq~~ 78 (93)
T 1wri_A 13 ITFDVEPGERLI-DIGSEKA-DLPL------SCQ-AGACSTCLGKIVSGTVDQ-----SEGSFLDDEQIEQGYVLTCIAI 78 (93)
T ss_dssp EEEEECTTSCHH-HHHHHHS-CCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEETTTCE
T ss_pred EEEEECCCCcHH-HHHHHCc-CCCC------CCC-CCCCCCCEEEEecCccCc-----cccccCCHHHHhCCcEEeeeCE
Confidence 578899999999 9999999 9987 698 999999999999998542 345666642 68999999999
Q ss_pred eccccCCccEEEEecchh
Q 029369 154 VGNKENSGKVCSRTMFLL 171 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~~ 171 (194)
+. +|++|+.+...
T Consensus 79 ~~-----~d~~v~~~~~~ 91 (93)
T 1wri_A 79 PE-----SDVVIETHKED 91 (93)
T ss_dssp ES-----SCEEEECCCGG
T ss_pred EC-----CCEEEEecccc
Confidence 86 77999876654
No 21
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.58 E-value=1.4e-15 Score=132.07 Aligned_cols=81 Identities=21% Similarity=0.274 Sum_probs=67.8
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (194)
+++++++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|+..+. +.+.|...|++. ++|+||+||+.
T Consensus 16 ~~~~~~~g~tll-~a~~~~gi~i~~------~C~-~g~Cg~C~v~v~~G~~~~~-~~~~~~~~l~~~~~~~g~~LaCq~~ 86 (338)
T 1krh_A 16 RFICIAQGETLS-DAAYRQQINIPM------DCR-EGECGTCRAFCESGNYDMP-EDNYIEDALTPEEAQQGYVLACQCR 86 (338)
T ss_dssp EEEEECTTCCHH-HHHHHTTCCCSC------SCS-SSSSCTTEEEEEECCEECC-GGGSCTTTCCHHHHHHTEEETTTCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CcCCCCCEEEEecCcEecc-cCccccccCCHHHHhCCeEEEEeCE
Confidence 578999999999 999999999998 698 9999999999999986543 134567778753 68999999999
Q ss_pred eccccCCccEEEEecch
Q 029369 154 VGNKENSGKVCSRTMFL 170 (194)
Q Consensus 154 v~~~e~~gdv~i~~~~~ 170 (194)
+. +|++|+.+..
T Consensus 87 ~~-----~~~~v~~~~~ 98 (338)
T 1krh_A 87 PT-----SDAVFQIQAS 98 (338)
T ss_dssp ES-----SSEEEEESSC
T ss_pred EC-----CCeEEEEecc
Confidence 96 6788887654
No 22
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=99.52 E-value=6.3e-15 Score=114.94 Aligned_cols=72 Identities=18% Similarity=0.320 Sum_probs=60.2
Q ss_pred EEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCC---CCCCeEEeeeeE
Q 029369 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQTI 153 (194)
Q Consensus 77 ~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLaCQ~~ 153 (194)
++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|++|++.. .|...|+. .++|+||+||++
T Consensus 39 ~v~v~~g~tlL-~aa~~~Gi~i~~------~C~-~G~CgtC~v~v~~G~v~~-----~e~~~L~~~e~~~~g~rLaCq~~ 105 (128)
T 1doi_A 39 SLEVNEGEYIL-EAAEAQGYDWPF------SCR-AGACANCAAIVLEGDIDM-----DMQQILSDEEVEDKNVRLTCIGS 105 (128)
T ss_dssp EEECCTTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEE-----CCCSSSCHHHHHTSCEEEGGGEE
T ss_pred EEEECCCCcHH-HHHHHcCCCCcc------CCC-ccCCCCCEeEEecCCcCc-----hhhccCCHhHhccCCEEEEEEeE
Confidence 67899999999 999999999998 695 999999999999998642 24556765 368999999999
Q ss_pred eccccCCcc-EEEE
Q 029369 154 VGNKENSGK-VCSR 166 (194)
Q Consensus 154 v~~~e~~gd-v~i~ 166 (194)
+. +| |+|+
T Consensus 106 ~~-----~d~i~i~ 114 (128)
T 1doi_A 106 PD-----ADEVKIV 114 (128)
T ss_dssp EC-----SSEEEEE
T ss_pred Ec-----CCeEEEE
Confidence 86 55 6665
No 23
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=99.50 E-value=8.5e-15 Score=139.83 Aligned_cols=91 Identities=24% Similarity=0.480 Sum_probs=72.9
Q ss_pred CcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHH
Q 029369 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135 (194)
Q Consensus 56 ~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E 135 (194)
.+++|+|.. . + +++++++|+||| ++++++|+++++ .|+|.|.||+|+|+|.+|++.. .|
T Consensus 2 ~m~~V~~~~-s----g----~~v~v~~G~tLL-eAa~~aGi~ip~------~C~G~G~CGtC~v~V~~G~v~~-----~e 60 (631)
T 3zyy_X 2 AEYKVLFKP-D----Q----KEVAISENTNLM-EALNLAGINIKT------VCGGAGTCGKCLVRVVDGQKRV-----ES 60 (631)
T ss_dssp -CEEEEEET-T----T----EEEEECTTSCHH-HHHHHHTCCCCC------SCCCSSCCSTTEEEEEESCEEE-----SC
T ss_pred CceEEEEec-C----C----eEEEECCCCcHH-HHHHHcCCCCCc------CCCCCCcCCCCEEEEeeCcccc-----cc
Confidence 456676753 1 2 578999999999 999999999998 6999999999999999999643 23
Q ss_pred HhccCCC--CCCeEEeeeeEeccccCCccEEEEecchhh
Q 029369 136 LRYLKKK--PESWRLACQTIVGNKENSGKVCSRTMFLLN 172 (194)
Q Consensus 136 ~~~L~~~--~~g~RLaCQ~~v~~~e~~gdv~i~~~~~~~ 172 (194)
...|++. ++|+||+||+++. +|++|+.+...+
T Consensus 61 ~~~Ls~~e~~~G~rLaCqa~~~-----sDl~Ielp~~~~ 94 (631)
T 3zyy_X 61 YGKLKQEEIAQGYVLACQTYPE-----SDLIIEIPFDSR 94 (631)
T ss_dssp CTTCCHHHHHTTEEETTTEEEC-----SSEEEECCTTSS
T ss_pred cccCCHHHhcCCcEEeeeCEEC-----CCEEEEecchhh
Confidence 4566642 6899999999996 889999876644
No 24
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.45 E-value=2.1e-13 Score=118.16 Aligned_cols=71 Identities=14% Similarity=0.362 Sum_probs=59.1
Q ss_pred EEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCC-CCeEEeeeeEec
Q 029369 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKP-ESWRLACQTIVG 155 (194)
Q Consensus 77 ~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~-~g~RLaCQ~~v~ 155 (194)
++++++|+||| ++|+++|+++++ .|+ .|.||+|+|+|++|.+.+. ...|++.+ +|++|+||+++.
T Consensus 248 ~~~~~~~~~ll-~a~~~~g~~~~~------~C~-~G~Cg~C~~~v~~G~~~~~------~~~l~~~e~~g~~L~C~~~~~ 313 (321)
T 2pia_A 248 SFEIPANRSIL-EVLRDANVRVPS------SCE-SGTCGSCKTALCSGEADHR------DMVLRDDEKGTQIMVCVSRAK 313 (321)
T ss_dssp EEEECTTSCHH-HHHHHTTCCCCC------SCS-SSSSCTTEEEEEESCEECC------CSSCCTTTTTTEEETTTCEES
T ss_pred EEEECCCCcHH-HHHHHcCCCCCC------CCC-CCCCCCCEEEEecCccccc------cCCCChHHHCCeEEEeEeEEC
Confidence 67899999999 999999999998 696 9999999999999986532 14566532 899999999996
Q ss_pred cccCCcc-EEEE
Q 029369 156 NKENSGK-VCSR 166 (194)
Q Consensus 156 ~~e~~gd-v~i~ 166 (194)
+| ++|+
T Consensus 314 -----~d~~~i~ 320 (321)
T 2pia_A 314 -----SAELVLD 320 (321)
T ss_dssp -----SSEEEEC
T ss_pred -----CCcEEEe
Confidence 65 7764
No 25
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.88 E-value=2.2e-09 Score=89.93 Aligned_cols=88 Identities=15% Similarity=0.270 Sum_probs=62.2
Q ss_pred cEEEEEecCCCC-CCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHH
Q 029369 57 EIELEFIAPRAG-DDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135 (194)
Q Consensus 57 ~I~v~f~~~~~~-~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E 135 (194)
+++|..+++..+ ..+.|..+++++++|+||| ++|++.|+.+...+.....|+ .|.||+|.|.| +|.
T Consensus 6 ~~~i~R~~~~~~~~~~~~~~~~v~~~~~~tlL-~~l~~~~~~~~~~l~~~~~c~-~g~Cg~C~v~i-~G~---------- 72 (241)
T 2bs2_B 6 TIRVFKYDPQSAVSKPHFQEYKIEEAPSMTIF-IVLNMIRETYDPDLNFDFVCR-AGICGSCGMMI-NGR---------- 72 (241)
T ss_dssp EEEEEECCTTCTTCCCEEEEEEEECCTTCBHH-HHHHHHHHHTCTTCCCCCSSS-SSSSCTTEEEE-TTE----------
T ss_pred EEEEEEeCCCCCCCCceEEEEEEeCCCCChHH-HHHHHhchhcCCCCccCCCCC-CCCCCCCEeEE-CCC----------
Confidence 345555555432 2345777889999999999 999987654332334456897 89999999999 675
Q ss_pred HhccCCCCCCeEEeeeeEeccccCCc-cEEEEecc
Q 029369 136 LRYLKKKPESWRLACQTIVGNKENSG-KVCSRTMF 169 (194)
Q Consensus 136 ~~~L~~~~~g~RLaCQ~~v~~~e~~g-dv~i~~~~ 169 (194)
.+|||++.+. +..| .++|+++.
T Consensus 73 ----------~~~aC~~~~~--~~~g~~~~ie~l~ 95 (241)
T 2bs2_B 73 ----------PSLACRTLTK--DFEDGVITLLPLP 95 (241)
T ss_dssp ----------EEEGGGCBGG--GCTTSEEEEECCT
T ss_pred ----------eecchhCcHh--HcCCCeEEEecCC
Confidence 3689999885 3333 48888765
No 26
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.73 E-value=1.4e-08 Score=85.03 Aligned_cols=89 Identities=17% Similarity=0.213 Sum_probs=63.5
Q ss_pred cEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHH
Q 029369 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTEL 136 (194)
Q Consensus 57 ~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~ 136 (194)
+|+|..++++.+....|..+++++++|+||| +||++.|+.....+.....|+ .|.||+|.|.| +|.
T Consensus 7 ~~~i~R~~~~~~~~~~~~~~~~~~~~~~tll-~al~~~~~~~~p~l~~~~~c~-~G~Cg~C~v~v-~G~----------- 72 (243)
T 1kf6_B 7 KIEVVRYNPEVDTAPHSAFYEVPYDATTSLL-DALGYIKDNLAPDLSYRWSCR-MAICGSCGMMV-NNV----------- 72 (243)
T ss_dssp EEEEEECCTTTCSSCEEEEEEEEECTTCBHH-HHHHHHHHHTCTTCCCCCCCS-SSSSCCCEEEE-TTE-----------
T ss_pred EEEEEEcCCCCCCCCeeEEEEEecCCCChHH-HHHHHcCcccCCCcccccCCC-CCcCCCCEeEE-CCE-----------
Confidence 3455555554333346777899999999999 999999965222244556895 99999999997 464
Q ss_pred hccCCCCCCeEEeeeeEeccccCCccEEEEecch
Q 029369 137 RYLKKKPESWRLACQTIVGNKENSGKVCSRTMFL 170 (194)
Q Consensus 137 ~~L~~~~~g~RLaCQ~~v~~~e~~gdv~i~~~~~ 170 (194)
.+|||++.+. +..+.++|+++..
T Consensus 73 ---------~~~aC~~~~~--~~~~~~~i~~l~~ 95 (243)
T 1kf6_B 73 ---------PKLACKTFLR--DYTDGMKVEALAN 95 (243)
T ss_dssp ---------EEEGGGCBGG--GCTTCEEEECCTT
T ss_pred ---------EEeeeeeEHh--hCCCcEEEEecCC
Confidence 3889999885 2223488888764
No 27
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.70 E-value=2.1e-08 Score=83.66 Aligned_cols=88 Identities=22% Similarity=0.272 Sum_probs=63.2
Q ss_pred cEEEEEecCCCCCCCCccEEEEEecC--CchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChH
Q 029369 57 EIELEFIAPRAGDDGSYPVERAKAIS--GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134 (194)
Q Consensus 57 ~I~v~f~~~~~~~dg~~~v~~v~v~~--G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~ 134 (194)
+|+|..++++.+....|..+++++++ |+||| ++|++.|+..+ .++....|+ .|.||.|.|.| +|.
T Consensus 4 ~~~i~R~~~~~~~~~~~~~~~v~~~~~~~~tll-~~l~~~~~~~~-~l~~~~~C~-~g~Cg~C~v~v-~G~--------- 70 (238)
T 2wdq_B 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLL-DALIQLKEKDP-SLSFRRSCR-EGVCGSDGLNM-NGK--------- 70 (238)
T ss_dssp EEEEEECCTTTCSSCEEEEEEEECCTTCCCBHH-HHHHHHHHHCT-TCCCCCSSS-SSSSCTTEEEE-TTE---------
T ss_pred EEEEEEcCCCCCCCCceEEEEeecCCCCCChHH-HHHHHhcccCC-CccccccCC-CCCCCCCEEEE-CCE---------
Confidence 35555556543333457778899999 99999 99999885522 345567898 89999999998 465
Q ss_pred HHhccCCCCCCeEEeeeeEeccc-cC-CccEEEEecc
Q 029369 135 ELRYLKKKPESWRLACQTIVGNK-EN-SGKVCSRTMF 169 (194)
Q Consensus 135 E~~~L~~~~~g~RLaCQ~~v~~~-e~-~gdv~i~~~~ 169 (194)
.+|||++.+. + -+ ++.++|+++.
T Consensus 71 -----------~~laC~~~~~-~~g~~~~~~~ie~l~ 95 (238)
T 2wdq_B 71 -----------NGLACITPIS-ALNQPGKKIVIRPLP 95 (238)
T ss_dssp -----------EEEGGGCBGG-GTCCTTSCEEEECCT
T ss_pred -----------EEcccccchh-hhccCCCCEEEeeCC
Confidence 3789999886 2 12 3458888765
No 28
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.66 E-value=3.8e-08 Score=85.83 Aligned_cols=92 Identities=21% Similarity=0.316 Sum_probs=66.7
Q ss_pred CcEEEEEecCCC-CCCCCccEEEEEecC-CchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCCh
Q 029369 56 PEIELEFIAPRA-GDDGSYPVERAKAIS-GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133 (194)
Q Consensus 56 ~~I~v~f~~~~~-~~dg~~~v~~v~v~~-G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~ 133 (194)
-+++|..++|+. +....|..+++++++ |++|| ++|++.+..+...++....|+ .|.||+|.|.|. |.
T Consensus 36 ~~~~I~R~~p~~~~~~p~~~~~~v~v~~~~~tlL-daL~~i~~~~~ptl~~~~~C~-~G~CGsC~V~In-G~-------- 104 (282)
T 3vr8_B 36 KTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVL-DALIKIKNEVDPTLTFRRSCR-EGICGSCAMNIA-GE-------- 104 (282)
T ss_pred EEEEEEEeCCCCCCCCCCcEEEEEEeCCCCCcHH-HHHHhcCcccCCceeecCCCC-CCCCCCCEEEEC-CE--------
Confidence 456666677753 223456667888988 99999 999998875443455667898 799999999985 65
Q ss_pred HHHhccCCCCCCeEEeeeeEeccccCCccEEEEecchh
Q 029369 134 TELRYLKKKPESWRLACQTIVGNKENSGKVCSRTMFLL 171 (194)
Q Consensus 134 ~E~~~L~~~~~g~RLaCQ~~v~~~e~~gdv~i~~~~~~ 171 (194)
.+|+|.+.+. +..+..++|+|+..+
T Consensus 105 ------------~~laC~t~v~-~~~~~~~tIepL~~~ 129 (282)
T 3vr8_B 105 ------------NTLACICNID-QNTSKTTKIYPLPHM 129 (282)
T ss_pred ------------EecchhhhHh-HhcCCcEEeccCCCC
Confidence 4779998885 334456888887654
No 29
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.60 E-value=5e-08 Score=82.57 Aligned_cols=89 Identities=19% Similarity=0.282 Sum_probs=61.9
Q ss_pred cEEEEEecCCCCC-CCCccEEEEEecC-CchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChH
Q 029369 57 EIELEFIAPRAGD-DGSYPVERAKAIS-GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134 (194)
Q Consensus 57 ~I~v~f~~~~~~~-dg~~~v~~v~v~~-G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~ 134 (194)
+|+|..++++... ...|..+++++++ |+||| ++|++.|+.....+.....|+ .|.||+|.|.| +|.
T Consensus 13 ~~~i~R~~~~~~~~~~~~~~~~v~~~~~~~tlL-d~l~~~~~~~~p~l~~~~~c~-~g~Cg~C~v~i-~G~--------- 80 (252)
T 2h88_B 13 KFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVL-DALIKIKNELDSTLTFRRSCR-EGICGSCAMNI-AGG--------- 80 (252)
T ss_dssp EEEEEECCTTSTTSCCEEEEEEEEGGGSCSBHH-HHHHHHHHHTCTTCCCCCSCS-SSSSCTTEEEE-TTE---------
T ss_pred EEEEEEeCCCCCCCCceEEEEEEecCCCCChHH-HHHHHhCcccCCCccccCCCC-CCCCCCCEEEE-CCc---------
Confidence 3444444554322 2357778889988 99999 999998753222234456897 99999999997 465
Q ss_pred HHhccCCCCCCeEEeeeeEeccccCCc-cEEEEecch
Q 029369 135 ELRYLKKKPESWRLACQTIVGNKENSG-KVCSRTMFL 170 (194)
Q Consensus 135 E~~~L~~~~~g~RLaCQ~~v~~~e~~g-dv~i~~~~~ 170 (194)
.+|||++.+. +.+| .++|+++..
T Consensus 81 -----------~~~aC~~~~~--~~~g~~~~iepl~~ 104 (252)
T 2h88_B 81 -----------NTLACTKKID--PDLSKTTKIYPLPH 104 (252)
T ss_dssp -----------EEEGGGSBCC--CCTTSCEEEECSTT
T ss_pred -----------EEccccCCHh--HcCCCceEEecccC
Confidence 5889999985 3334 588988763
No 30
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=98.31 E-value=2.1e-07 Score=75.14 Aligned_cols=63 Identities=19% Similarity=0.314 Sum_probs=47.9
Q ss_pred EEEEecCCchHHHHHHHHC-CCc-cccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeE
Q 029369 76 ERAKAISGEKLLRNIMLDN-KIE-LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~-GI~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~ 153 (194)
+++++++|++|| ++|+++ |+. +.. .|+ .|.||+|.|.| +|. .+++|.+.
T Consensus 21 ~~~~v~~~~tlL-~~Lr~~~gl~g~~~------~C~-~G~CGaC~V~v-dG~--------------------~v~sC~~~ 71 (168)
T 1t3q_A 21 RVFYVEPRMHLA-DALREVVGLTGTKI------GCE-QGVCGSCTILI-DGA--------------------PMRSCLTL 71 (168)
T ss_dssp EEEEECTTSBHH-HHHHHTTCCTTSCC------SCS-SSSSCTTEEEE-TTE--------------------EEEGGGSB
T ss_pred EEEecCCCCcHH-HHHHhcCCCCcccc------CCC-CCCCCCcEEEE-CCC--------------------EeechhhH
Confidence 467789999999 999996 886 544 698 89999999999 564 47899998
Q ss_pred eccccCCcc--EEEEecc
Q 029369 154 VGNKENSGK--VCSRTMF 169 (194)
Q Consensus 154 v~~~e~~gd--v~i~~~~ 169 (194)
+. +++|. ++|+++.
T Consensus 72 ~~--~~~G~~v~Tiegl~ 87 (168)
T 1t3q_A 72 AV--QAEGCSIETVEGLS 87 (168)
T ss_dssp GG--GGTTCEEECGGGTC
T ss_pred HH--HhCCCeEEEEcCCC
Confidence 74 44454 3445554
No 31
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=98.01 E-value=6.6e-06 Score=79.71 Aligned_cols=66 Identities=20% Similarity=0.348 Sum_probs=46.4
Q ss_pred EEEecCCchHHHHHHHHCCCccccccCcccCC-----CCceeccCcEEEEccCcccCCCCChHHHhc-cCCC-------C
Q 029369 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNC-----GGGGSCGTCIVEIIDGKDLLNERTNTELRY-LKKK-------P 143 (194)
Q Consensus 77 ~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C-----~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~-L~~~-------~ 143 (194)
+++|++|+||| +|++++||++|+ .| ++.|.|+.|.|+|..+.. +.+... +++. .
T Consensus 10 ~~~v~~g~til-~a~~~~gi~ip~------~C~~~~~~~~G~C~~C~V~v~~~~~------~~~g~~~~~~~G~~~~~~~ 76 (783)
T 3i9v_3 10 IVEVPPGTSVM-DAVFHAGYDVPL------FCSEKHLSPIGACRMCLVRIGLPKK------GPDGKPLLNEKGEPEIQWQ 76 (783)
T ss_dssp EEEECTTCBHH-HHHHHTTCCCCC------SSCCTTSCCCCCSCCSEEEEECC-----------------------CCBC
T ss_pred EEEeCCCChHH-HHHHHhCCCccc------cCCCCCCCCCcccCCcEEEeccccc------ccccccccccccccccccC
Confidence 67899999999 999999999998 58 458999999999963221 011111 1111 2
Q ss_pred CCeEEeeeeEec
Q 029369 144 ESWRLACQTIVG 155 (194)
Q Consensus 144 ~g~RLaCQ~~v~ 155 (194)
.+..+||++.+.
T Consensus 77 ~~~~~aC~t~v~ 88 (783)
T 3i9v_3 77 PKLAASCVTAVA 88 (783)
T ss_dssp SSCEETTTCBCC
T ss_pred CCcccccCCCCC
Confidence 367899999986
No 32
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=97.96 E-value=2.8e-06 Score=68.29 Aligned_cols=64 Identities=28% Similarity=0.568 Sum_probs=47.7
Q ss_pred EEEEecCCchHHHHHHHHC-CCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 029369 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~-GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (194)
+++++++|++|| ++|++. |+. +....|+ .|.||.|.|.| +|. .+++|++.+
T Consensus 14 ~~v~~~~~~tLL-~~Lr~~~gl~-----g~k~gC~-~G~CGaCtV~v-dG~--------------------~v~sC~~~~ 65 (161)
T 1rm6_C 14 REDLVPDNMLLL-DYLRETVGLT-----GTKQGCD-GGECGACTVLV-DDR--------------------PRLACSTLA 65 (161)
T ss_dssp EEEEEETTCBHH-HHHHHTTCCT-----TSCCCSS-SSSSCTTEEEE-TTE--------------------EEEGGGSBG
T ss_pred EEEecCCcCcHH-HHHHHcCCCc-----ccccCCC-CCCCCCCEEEE-CCc--------------------EEechHHHH
Confidence 466789999999 999986 442 2345798 89999999999 464 478999987
Q ss_pred ccccCCcc--EEEEecc
Q 029369 155 GNKENSGK--VCSRTMF 169 (194)
Q Consensus 155 ~~~e~~gd--v~i~~~~ 169 (194)
. +.+|. ++|+++.
T Consensus 66 ~--~~~G~~v~TiEgL~ 80 (161)
T 1rm6_C 66 H--QVAGKKVETVESLA 80 (161)
T ss_dssp G--GGTTSEEECGGGSS
T ss_pred H--HhCCceEEEECCCC
Confidence 4 44454 5566665
No 33
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=97.74 E-value=4.8e-05 Score=71.42 Aligned_cols=58 Identities=26% Similarity=0.449 Sum_probs=44.3
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCC-ceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGG-GGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G-~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (194)
+++++++|+||| +||+++|+.+++. -....|.+ .|.||.|.|.|. |. . .++||++.+
T Consensus 9 ~~v~v~~g~tiL-~a~~~~gi~ip~l-C~~~~~~~~~G~Cg~C~V~v~-g~------------------~-~~~aC~t~v 66 (574)
T 3c8y_A 9 VQFNTDEDTTIL-KFARDNNIDISAL-CFLNNCNNDINKCEICTVEVE-GT------------------G-LVTACDTLI 66 (574)
T ss_dssp EEEEECCCCBHH-HHHHHTTCCCCCS-SCBTTBCCSSSCCCTTEEEET-TT------------------E-EEEGGGCBC
T ss_pred EEEEeCCCCHHH-HHHHHcCCCCCcc-cCCCCCCCCcccCCCCEEEeC-CC------------------c-ccccCCCCc
Confidence 467899999999 9999999998872 00112337 899999999984 43 1 578999988
Q ss_pred c
Q 029369 155 G 155 (194)
Q Consensus 155 ~ 155 (194)
.
T Consensus 67 ~ 67 (574)
T 3c8y_A 67 E 67 (574)
T ss_dssp C
T ss_pred c
Confidence 6
No 34
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=97.65 E-value=1.9e-05 Score=63.94 Aligned_cols=64 Identities=19% Similarity=0.403 Sum_probs=46.3
Q ss_pred EEEEecCCchHHHHHHHHC-CCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 029369 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~-GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (194)
++++++++++|| ++|++. |+. +..+.|+ .|.||.|.|.|. |. .+++|.+.+
T Consensus 15 ~~~~v~~~~tLL-d~LR~~lgl~-----g~k~gC~-~G~CGaCtV~vd-G~--------------------~v~SC~~~~ 66 (166)
T 1n62_A 15 VEALVEPRTLLI-HFIREQQNLT-----GAHIGCD-TSHCGACTVDLD-GM--------------------SVKSCTMFA 66 (166)
T ss_dssp EEEEECTTCBHH-HHHHHTSCCT-----TSCCCCS-SSCSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCcHH-HHHHHcCCCC-----ccccCCC-CCCCCCCEEEEC-Cc--------------------EEechhhhH
Confidence 567899999999 998874 432 2335798 899999999994 54 478999987
Q ss_pred ccccCCcc--EEEEecc
Q 029369 155 GNKENSGK--VCSRTMF 169 (194)
Q Consensus 155 ~~~e~~gd--v~i~~~~ 169 (194)
. +.+|. ++|+.+.
T Consensus 67 ~--~~~G~~V~TiEgL~ 81 (166)
T 1n62_A 67 V--QANGASITTIEGMA 81 (166)
T ss_dssp G--GGTTCEEECGGGSS
T ss_pred H--HhCCceEEEeCCCC
Confidence 4 44554 4455554
No 35
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=97.63 E-value=2.2e-05 Score=63.35 Aligned_cols=64 Identities=17% Similarity=0.451 Sum_probs=46.6
Q ss_pred EEEEecCCchHHHHHHHHC-CCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 029369 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~-GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (194)
++++++++++|| ++|++. |+. +..+.|+ .|.||.|.|.|. |. .+++|.+.+
T Consensus 15 ~~~~v~~~~tLL-d~LR~~lglt-----g~k~gC~-~G~CGaCtV~vd-G~--------------------~v~sC~~~~ 66 (163)
T 1ffv_A 15 QEKAVEPRTLLI-HFLREELNLT-----GAHIGCE-TSHCGACTVDID-GR--------------------SVKSCTHLA 66 (163)
T ss_dssp EEEEECTTCBHH-HHHHHTSCCT-----TSCCCCS-SSCSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCcHH-HHHHhcCCCc-----ccccCCC-CCCCCCCEEEEC-Cc--------------------EecchHhhH
Confidence 467899999999 998874 432 2345798 899999999994 54 478999987
Q ss_pred ccccCCcc--EEEEecc
Q 029369 155 GNKENSGK--VCSRTMF 169 (194)
Q Consensus 155 ~~~e~~gd--v~i~~~~ 169 (194)
. +.+|. ++|+.+.
T Consensus 67 ~--~~~G~~I~TiEgL~ 81 (163)
T 1ffv_A 67 V--QCDGSEVLTVEGLA 81 (163)
T ss_dssp G--GGTTCEEECGGGTS
T ss_pred H--HhCCceEEEECCCC
Confidence 4 44554 4555554
No 36
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=97.61 E-value=1.8e-05 Score=63.88 Aligned_cols=64 Identities=17% Similarity=0.417 Sum_probs=45.7
Q ss_pred EEEEecCCchHHHHHHHHC-CCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 029369 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~-GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (194)
++++++++++|| ++|++. |+. +..+.|+ .|.||.|.|.|. |. .+++|...+
T Consensus 15 ~~v~v~p~~tLL-d~LR~~lglt-----gtk~gC~-~G~CGACtV~vd-G~--------------------~v~sC~~~~ 66 (160)
T 3hrd_D 15 RSIVTEPNKRLL-DLLREDFGLT-----SVKEGCS-EGECGACTVIFN-GD--------------------PVTTCCMLA 66 (160)
T ss_dssp EEEEECSSSBHH-HHHHTTSCCT-----TSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCCHH-HHHHHhcCCC-----ccccccC-CCCCCCCEEEEC-CE--------------------EEEchhhhh
Confidence 567899999999 999875 542 2335698 999999999995 54 477898877
Q ss_pred ccccCCcc--EEEEecc
Q 029369 155 GNKENSGK--VCSRTMF 169 (194)
Q Consensus 155 ~~~e~~gd--v~i~~~~ 169 (194)
. +.+|. ++|+.+.
T Consensus 67 ~--~~~G~~I~TiEgl~ 81 (160)
T 3hrd_D 67 G--QADESTIITLEGVA 81 (160)
T ss_dssp G--GGTTEEEECGGGTS
T ss_pred h--hhCCCceEEeCCCC
Confidence 4 44443 3445443
No 37
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=96.60 E-value=0.0007 Score=66.96 Aligned_cols=66 Identities=23% Similarity=0.338 Sum_probs=48.4
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEec
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v~ 155 (194)
++++++++++|| ++|++. ..+. +....|+ .|.||.|-|.|. |. .+++|.+.+.
T Consensus 13 ~~~~~~~~~~ll-~~Lr~~-~~l~---g~k~gC~-~g~CGaCtv~vd-g~--------------------~~~sC~~~~~ 65 (907)
T 1vlb_A 13 QNLFVDAEALLS-DVLRQQ-LGLT---GVKVGCE-QGQCGACSVILD-GK--------------------VVRACVTKMK 65 (907)
T ss_dssp EEEEECTTSBHH-HHHHHT-TCCT---TSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGCBGG
T ss_pred EEEecCCCChHH-HHHHHh-cCCC---eecCCCC-CCCcCccEEEEC-Ce--------------------EeechHhHHH
Confidence 567899999999 999874 2222 3456798 899999999994 54 5889999874
Q ss_pred cccC-Cc--cEEEEecch
Q 029369 156 NKEN-SG--KVCSRTMFL 170 (194)
Q Consensus 156 ~~e~-~g--dv~i~~~~~ 170 (194)
++ +| .++|+.+..
T Consensus 66 --~~~~g~~i~Tiegl~~ 81 (907)
T 1vlb_A 66 --RVADGAQITTIEGVGQ 81 (907)
T ss_dssp --GSCTTCEEECHHHHCB
T ss_pred --HHcCCCcEEEECCCCC
Confidence 44 55 356666653
No 38
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=96.58 E-value=0.00074 Score=66.77 Aligned_cols=66 Identities=21% Similarity=0.398 Sum_probs=48.4
Q ss_pred EEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEec
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v~ 155 (194)
+++++.++++|| ++|++. +.+. +....|+ .|.||.|-|.|. |. .+++|...+.
T Consensus 13 ~~~~~~~~~~ll-~~Lr~~-~~l~---g~k~gC~-~G~CGaCtv~vd-g~--------------------~v~sC~~~~~ 65 (907)
T 1dgj_A 13 RRLLVSPNDLLV-DVLRSQ-LQLT---SVKVGCG-KGQCGACTVILD-GK--------------------VVRACIIKMS 65 (907)
T ss_dssp CEEEECTTCBHH-HHHHHT-TCCT---TSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGCBGG
T ss_pred EEEecCCCCcHH-HHHHHh-cCCC---ccCCCCC-CCCcCceEEEEC-Ce--------------------EeehhHhHHH
Confidence 357899999999 999875 2332 4556898 899999999994 54 5789999874
Q ss_pred cccC-Ccc--EEEEecch
Q 029369 156 NKEN-SGK--VCSRTMFL 170 (194)
Q Consensus 156 ~~e~-~gd--v~i~~~~~ 170 (194)
+. +|. ++|+.+..
T Consensus 66 --~~~~g~~i~TiEgl~~ 81 (907)
T 1dgj_A 66 --RVAENASVTTLEGIGA 81 (907)
T ss_dssp --GSCTTCEEECGGGTCB
T ss_pred --HHcCCCcEEEECCCCC
Confidence 44 554 56666653
No 39
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.27 E-value=0.001 Score=61.19 Aligned_cols=68 Identities=22% Similarity=0.369 Sum_probs=47.5
Q ss_pred EEE-EecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 029369 76 ERA-KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (194)
Q Consensus 76 ~~v-~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (194)
+++ +++++++|| ++|++.|+. +....|+ .|.||.|-|.|.+-.+ ...+++|...+
T Consensus 12 ~~~~~~~~~~~Ll-~~Lr~~~l~-----g~k~gC~-~G~CGaCtV~v~~~~~-----------------g~~v~sCl~~~ 67 (462)
T 2w3s_A 12 RRVRIEDPTQSLL-EWLRAEGLT-----GTKEGCN-EGDCGACTVMIRDAAG-----------------SRAVNACLMML 67 (462)
T ss_dssp EEEECSCTTCBHH-HHHHHTTCT-----TSCCSCS-SSSSCTTEEEEEETTE-----------------EEEEETTTCBG
T ss_pred EEEecCCCCCcHH-HHHHHcCCC-----ccCCCCC-CCCcCCcEEEEEecCC-----------------CeEEEchhhhH
Confidence 456 678999999 999855543 3456798 8999999999942111 01688999887
Q ss_pred ccccCCc--cEEEEecc
Q 029369 155 GNKENSG--KVCSRTMF 169 (194)
Q Consensus 155 ~~~e~~g--dv~i~~~~ 169 (194)
. +.+| .++|+.+.
T Consensus 68 ~--~~~g~~i~TiEgl~ 82 (462)
T 2w3s_A 68 P--QIAGKALRTIEGIA 82 (462)
T ss_dssp G--GGTTCEEECGGGTS
T ss_pred H--HhCCCcEEEECCCC
Confidence 4 4455 35666665
No 40
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=95.10 E-value=0.02 Score=46.22 Aligned_cols=39 Identities=28% Similarity=0.630 Sum_probs=30.6
Q ss_pred EEEecCCchHHHHHHHHC-CCccccccCcccCCCCceeccCcEEEEc
Q 029369 77 RAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEII 122 (194)
Q Consensus 77 ~v~v~~G~tLLr~aa~~~-GI~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (194)
.++++++++|| ++|++. |+. +....|+ .|.||.|-|.|.
T Consensus 16 ~~~~~p~~~Ll-~~LR~~lglt-----GtK~GC~-~G~CGACTVlvd 55 (164)
T 3nvw_A 16 EKNADPETTLL-AYLRRKLGLR-----GTKLGCG-EGGCGACTVMLS 55 (164)
T ss_dssp ETTCCTTCBHH-HHHHHTSCCT-----TSCCSCS-SSSSCTTEEEEE
T ss_pred EecCCCCCCHH-HHHHHHcCCC-----CcCCCcC-CCCCCCCEEEEc
Confidence 45688999999 999875 432 2345697 999999999997
No 41
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.39 E-value=0.21 Score=44.98 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=36.1
Q ss_pred CCcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEc
Q 029369 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (194)
Q Consensus 55 ~~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (194)
...|+|+|.+ +.+++.+|+||+ +||+++|+++.. +...+.-.|.-.|+.|.|.|.
T Consensus 13 ~~~v~~~~dg-----------~~~~~~~g~ti~-~a~~~~g~~~~~-~~~~~~p~g~~~~~~c~v~v~ 67 (493)
T 1y56_A 13 GKKVTIYFEG-----------KELEAYEGEKLP-VALLANEIYWLT-TSNEGRKRGAFTFGPVPMTVN 67 (493)
T ss_dssp SCEEEEEETT-----------EEEEEETTCBHH-HHHHHTTCCCCE-ECTTSCEECSSSSSCCEEBSS
T ss_pred CCeEEEEECC-----------EEEEecCCCHHH-HHHHHCCCceec-CCCCCCCCccccceEEEEEEC
Confidence 3468887743 357899999999 999999997532 111111122333788999875
No 42
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=88.65 E-value=0.45 Score=44.04 Aligned_cols=53 Identities=9% Similarity=0.066 Sum_probs=36.4
Q ss_pred EEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEccCcc
Q 029369 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKD 126 (194)
Q Consensus 58 I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~ 126 (194)
++|..++|+.+..+.|..++|++.+++++| ++|..-. . +.|+ . +|.+.|. |..
T Consensus 27 ~~i~R~~p~~~~~p~~~~y~v~~~~~~~vL-d~L~~ik-~--------l~fr-~----sCam~IN-G~~ 79 (514)
T 3kwl_A 27 VKVFRFETNKDYNPAYESYFLEYQEDQYLL-DLLKQLK-G--------VSYS-E----NIALKIN-QIA 79 (514)
T ss_dssp EEEEECBTTSCSCCEEEEEEEECCTTCBHH-HHHTTST-T--------CCCC-S----SCCEEET-TEE
T ss_pred EEEEEeCCCCCCCCceEEEEEeCCCCCcHH-HHHHHhh-h--------Ceee-c----cceEEEC-CEe
Confidence 555555665433455666788899999999 9997766 2 2477 3 7888885 764
No 43
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=87.19 E-value=0.75 Score=45.31 Aligned_cols=55 Identities=13% Similarity=0.225 Sum_probs=41.2
Q ss_pred CCcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCcccc-c--cC--cccCCCCceeccCcEEEEc
Q 029369 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYA-T--YG--KVMNCGGGGSCGTCIVEII 122 (194)
Q Consensus 55 ~~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~-~--~~--~~~~C~G~G~CGTC~V~V~ 122 (194)
+..|+|+|.+ +++.+.+|+||+ .||+.+|+.+.. + |+ ....|. .|.|..|.|.|.
T Consensus 20 ~~~~~~~~dG-----------~~~~~~~g~tv~-~aL~~~Gv~~~~~s~~~~~prg~~~~-~~~c~~~~v~v~ 79 (965)
T 2gag_A 20 EEALSLTVDG-----------AKLSAFRGDTVA-SALLANGVRRAGNSLYLDRPRGIFAA-GVEEPNALVTVS 79 (965)
T ss_dssp EEEEEEEETT-----------EEEEEEETCBHH-HHHHHTTCCBCSCCTTTCCCCBCCCS-STTCCSCEEEEC
T ss_pred CCeEEEEECC-----------EEEEecCCCHHH-HHHHHcCCeEeecCCCCCCCcccccC-CccCCceEEEEc
Confidence 3467877643 456788999999 999999988544 2 22 225677 688999999998
No 44
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=82.95 E-value=0.7 Score=37.86 Aligned_cols=31 Identities=29% Similarity=0.536 Sum_probs=26.0
Q ss_pred HHHCCCccccccCcccCCCCceeccCcEEEEc
Q 029369 91 MLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (194)
Q Consensus 91 a~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (194)
+.+.|++..-++..++.|| -|.||.|.|...
T Consensus 209 l~~~gv~~~vs~e~~m~CG-~G~C~~C~~~~~ 239 (262)
T 1ep3_B 209 KYDQLERLYISMESRMACG-IGACYACVEHDK 239 (262)
T ss_dssp HTTTCSSEEEECCCCCSSS-SSSSCTTEEEET
T ss_pred HHhCCCCEEEEecccccCc-ccccccCCcccc
Confidence 6678888766778889997 999999999864
No 45
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=81.50 E-value=1.4 Score=45.44 Aligned_cols=38 Identities=29% Similarity=0.612 Sum_probs=29.0
Q ss_pred EecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEc
Q 029369 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (194)
Q Consensus 79 ~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (194)
.+.++++|| +.|++. +.+.+ .-..|+ .|.||.|.|.|.
T Consensus 19 ~~~p~~~ll-~~LR~~-~~ltg---tk~gC~-~g~CGaCtV~~~ 56 (1332)
T 3unc_A 19 NADPETTLL-AYLRRK-LGLRG---TKLGCG-EGGCGACTVMLS 56 (1332)
T ss_dssp TCCTTCBHH-HHHHHT-SCCTT---SCCSCS-SSSSCTTEEEEE
T ss_pred cCCCCCCHH-HHHhhh-cCCCC---cCCCcC-CCCCCCcEEEEe
Confidence 588999999 998874 23332 234697 999999999995
No 46
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=59.32 E-value=15 Score=27.03 Aligned_cols=39 Identities=10% Similarity=0.045 Sum_probs=28.7
Q ss_pred CCcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCCCcccc
Q 029369 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYA 100 (194)
Q Consensus 55 ~~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~GI~l~~ 100 (194)
...|+|++.++. ++-...+|+ +.|++|+ ++|.++. .+..
T Consensus 6 ~k~i~i~v~~~~----~~~~~~~v~-t~g~tL~-dvLk~~~-~ve~ 44 (101)
T 3u7z_A 6 EKHITVTVIHGD----QTENVFEFD-TDAKYLG-EVLESEN-LVDG 44 (101)
T ss_dssp CEEEEEEEECTT----SCEEEEEEE-ECCSBHH-HHHHHTT-CEEE
T ss_pred eeEEEEEEEcCC----CceeEEEEc-CCccHHH-HHHHHcC-cccc
Confidence 357888888753 444456788 9999999 9999987 4443
No 47
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=54.72 E-value=12 Score=38.60 Aligned_cols=38 Identities=37% Similarity=0.628 Sum_probs=28.4
Q ss_pred EecCCchHHHHHHHHCCCccccccCcccCCCCceeccCcEEEEc
Q 029369 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (194)
Q Consensus 79 ~v~~G~tLLr~aa~~~GI~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (194)
.+.+.+||| +-|+.. ..+.+ .-.-|+ .|-||.|.|-|-
T Consensus 23 ~~~p~~tLl-~~LR~~-~~ltG---TK~gC~-EG~CGACtV~v~ 60 (1335)
T 3zyv_A 23 NADPEVNLL-FYLRKV-IRLTG---TKYGCG-GGDCGACTVMIS 60 (1335)
T ss_dssp SCCTTCBHH-HHHHHT-TCCTT---SCCSCS-SSSSCTTEEEEE
T ss_pred CCCcCccHH-HHHhcc-CCCcc---cccccC-CCCCcceEEEEe
Confidence 477999999 988763 33443 223598 899999999985
No 48
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=21.98 E-value=82 Score=21.22 Aligned_cols=23 Identities=0% Similarity=-0.052 Sum_probs=19.3
Q ss_pred EEEEecCCchHHHHHHHHCCCccc
Q 029369 76 ERAKAISGEKLLRNIMLDNKIELY 99 (194)
Q Consensus 76 ~~v~v~~G~tLLr~aa~~~GI~l~ 99 (194)
.++++++|.|+. +.+.+.|++..
T Consensus 13 ~~~ev~~g~Tv~-dLL~~Lgl~~~ 35 (74)
T 2l32_A 13 SEVAVDDDGTYA-DLVRAVDLSPH 35 (74)
T ss_dssp EEEECSTTCSHH-HHHHTTCCCSS
T ss_pred eeEEcCCCCcHH-HHHHHcCCCcc
Confidence 457899999987 99999998754
No 49
>3kdv_A DDRB, DNA damage response B protein; anti-parallel beta-barrel, pentamer, DNA binding protein; HET: DNA; 2.80A {Deinococcus geothermalis} PDB: 4exw_A
Probab=20.71 E-value=1e+02 Score=24.77 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=26.7
Q ss_pred CCCcEEEEEecCCCCCCCCccEEEEEecCCchHHHHHHHHCC
Q 029369 54 EKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNK 95 (194)
Q Consensus 54 ~~~~I~v~f~~~~~~~dg~~~v~~v~v~~G~tLLr~aa~~~G 95 (194)
|-.+++|+|..+-+ . ..+++++.++.|| +.++..|
T Consensus 4 ~~tml~i~f~t~LG----~--~V~vdve~~~~~l-~v~R~yG 38 (184)
T 3kdv_A 4 PFTMLHIEFITDLG----A--KVTVDVESADKLL-DVQRQYG 38 (184)
T ss_dssp CSCCEEEEEECTTC----C--EEEEEESSGGGHH-HHHHHHH
T ss_pred ccceEEEEEecCCC----c--eEEEecCCHHHHH-HHHHHhh
Confidence 45689999998643 2 2478899999999 9988754
Done!