BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029375
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O48671|RER1B_ARATH Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2
Length = 195
Score = 333 bits (855), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 158/195 (81%), Positives = 176/195 (90%), Gaps = 1/195 (0%)
Query: 1 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQG 60
MEG GGD+ S A+PV + H+AWR+YQYYLDKTTPH+ RWIGTLV IYCLRV+ + G
Sbjct: 1 MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHG 60
Query: 61 FYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSM 120
FYIISYGLGIYLLNLLIGFLSPLVDPE+EV+DG LPT+GSDEFKPFIRRLPEFKFWYSM
Sbjct: 61 FYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSM 120
Query: 121 TKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180
TKAFCIAF+MTFFSVFDVPVFWPILLCYW+VLFVLTMRRQIAHMIK++YIPF+IGKQKY
Sbjct: 121 TKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFSIGKQKYS 180
Query: 181 GKKPS-SSGGGSRGD 194
G+K S +SGGGSR D
Sbjct: 181 GRKSSANSGGGSRAD 195
>sp|O48670|RER1A_ARATH Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1
Length = 191
Score = 324 bits (831), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/195 (80%), Positives = 173/195 (88%), Gaps = 5/195 (2%)
Query: 1 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQG 60
M+ GGD+ S A+PV Q H+AWR+YQ+YLDKTTPHA YRWIGTLV+ IYCLRV+Y+QG
Sbjct: 1 MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQG 60
Query: 61 FYIISYGLGIYLLNLLIGFLSPLVDPEIE-VADGPLLPTKGSDEFKPFIRRLPEFKFWYS 119
FYII+YGLGIYLLNLLIGFLSPLVDPE V+DGP LPT+GSDEFKPFIRRLPEFKFWYS
Sbjct: 61 FYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYS 120
Query: 120 MTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKY 179
MTKAFCIAF+MTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF+ GKQKY
Sbjct: 121 MTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFSFGKQKY 180
Query: 180 GGKKPSSSGGGSRGD 194
GG+ S GSR D
Sbjct: 181 GGR----SSSGSRAD 191
>sp|Q9ZWI7|RER1C_ARATH Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1
Length = 212
Score = 228 bits (581), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 137/180 (76%), Gaps = 1/180 (0%)
Query: 12 ASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGFYIISYGLGIY 71
A V++ H + Q+ LDKT PH +YRWI L ++ IY +RV++V+GFYII+Y +GIY
Sbjct: 34 ADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIY 93
Query: 72 LLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMT 131
LLNL+I FLSP DPE + G LPT+ SDE++PF+RRLPEFKFW S+ +AF I F+MT
Sbjct: 94 LLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMT 153
Query: 132 FFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYGGKKPSSSGGGS 191
FF VFDVPVFWPILL YW++LF LTMR+QI HMIKYRY+PF+ GK++Y GKKP+ +
Sbjct: 154 FFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFSFGKKQY-GKKPAPTESSE 212
>sp|Q9ZPV7|RER1D_ARATH Protein RER1D OS=Arabidopsis thaliana GN=At2g18240 PE=2 SV=2
Length = 221
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 131/180 (72%), Gaps = 4/180 (2%)
Query: 1 MEGIGGDTASA----ASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVF 56
ME G A ASP+++W + + +Q YLD++ P+ V RW+ TLV IY RV+
Sbjct: 1 MEDEPGSENEADTIVASPLAKWRIEFSKSFQNYLDRSAPNIVRRWLVTLVAAVIYIYRVY 60
Query: 57 YVQGFYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKF 116
V G+++ISYGL Y+LNLLIGFLSP VDPE+E D LP SDE+KPF+RRLPEFKF
Sbjct: 61 SVYGYFVISYGLATYILNLLIGFLSPKVDPELEALDPDSLPVDESDEYKPFVRRLPEFKF 120
Query: 117 WYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGK 176
WY+ TKAF +AFVMTFFS DVPVFWPILLCYW+VL+ LTM+R I HM KYRY PF++ K
Sbjct: 121 WYAATKAFVVAFVMTFFSFLDVPVFWPILLCYWLVLYSLTMKRLIVHMFKYRYFPFDVRK 180
>sp|A5PJ65|RER1_BOVIN Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2
Length = 196
Score = 207 bits (527), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Query: 2 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGF 61
+ +G S V ++ ++YQ +LDK+TPH RW+ TL + IY +RV+ +QG+
Sbjct: 5 DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGW 64
Query: 62 YIISYGLGIYLLNLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYS 119
YI++Y LGIY LNL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65 YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124
Query: 120 MTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKY 179
TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF GK+ Y
Sbjct: 125 ATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRTY 184
Query: 180 GGKKPSSSGGGS 191
GK+ + S
Sbjct: 185 KGKEDAGKAFAS 196
>sp|Q5ZHM5|RER1_CHICK Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1
Length = 196
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 132/184 (71%), Gaps = 2/184 (1%)
Query: 2 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGF 61
+ IG S V ++ ++YQ +LDK+TP+ RWI TL + IY +RV+ +QG+
Sbjct: 5 DSIGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGW 64
Query: 62 YIISYGLGIYLLNLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYS 119
YI++Y LGIY LNL I FLSP VDP + + DGP LPT+ ++EF+PFIRRLPEFKFW+S
Sbjct: 65 YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHS 124
Query: 120 MTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKY 179
TK +A TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF GK+KY
Sbjct: 125 ATKGILVAMACTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRKY 184
Query: 180 GGKK 183
GK+
Sbjct: 185 KGKE 188
>sp|Q5R5U4|RER1_PONAB Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1
Length = 196
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Query: 2 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGF 61
+ +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +QG+
Sbjct: 5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGW 64
Query: 62 YIISYGLGIYLLNLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYS 119
YI++Y LGIY LNL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65 YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124
Query: 120 MTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKY 179
TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF GK++Y
Sbjct: 125 ATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRY 184
Query: 180 GGKKPSSSGGGS 191
GK+ + S
Sbjct: 185 RGKEDAGKAFAS 196
>sp|O15258|RER1_HUMAN Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1
Length = 196
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 135/192 (70%), Gaps = 2/192 (1%)
Query: 2 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGF 61
+ +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +QG+
Sbjct: 5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGW 64
Query: 62 YIISYGLGIYLLNLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYS 119
YI++Y LGIY LNL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65 YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124
Query: 120 MTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKY 179
TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF GK++Y
Sbjct: 125 ATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRY 184
Query: 180 GGKKPSSSGGGS 191
GK+ + S
Sbjct: 185 RGKEDAGKAFAS 196
>sp|Q498C8|RER1_RAT Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1
Length = 196
Score = 204 bits (518), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 133/184 (72%), Gaps = 2/184 (1%)
Query: 2 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGF 61
+ +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +QG+
Sbjct: 5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGW 64
Query: 62 YIISYGLGIYLLNLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYS 119
YI++Y LGIY LNL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65 YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124
Query: 120 MTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKY 179
TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF GK++Y
Sbjct: 125 ATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRY 184
Query: 180 GGKK 183
GK+
Sbjct: 185 KGKE 188
>sp|Q9CQU3|RER1_MOUSE Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1
Length = 196
Score = 204 bits (518), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 133/184 (72%), Gaps = 2/184 (1%)
Query: 2 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGF 61
+ +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +QG+
Sbjct: 5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGW 64
Query: 62 YIISYGLGIYLLNLLIGFLSPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYS 119
YI++Y LGIY LNL I FLSP VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++
Sbjct: 65 YIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHA 124
Query: 120 MTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKY 179
TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF GK++Y
Sbjct: 125 ATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPFTHGKRRY 184
Query: 180 GGKK 183
GK+
Sbjct: 185 KGKE 188
>sp|P52879|RER1_CAEEL Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=3 SV=1
Length = 191
Score = 187 bits (475), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Query: 15 VSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGFYIISYGLGIYLLN 74
S++ H YQYYLD+ TPH +RW+ L+ L + R+ +QGFYI++Y +GIY LN
Sbjct: 12 TSRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYYLN 71
Query: 75 LLIGFLSPLVDPEIEVAD---GPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMT 131
L + FL+P +DP +E D GP+LP+K +DEF+PF+RRLPEFKFW+S KA IA T
Sbjct: 72 LFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCT 131
Query: 132 FFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYGGKKPS 185
FF FDVPVFWPIL+ Y+ +L LT++RQI HMIKYRYIPF +GK + GK+ +
Sbjct: 132 FFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPFTVGKPRMAGKEDT 185
>sp|Q10358|RER1_SCHPO Protein rer1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rer1 PE=3 SV=1
Length = 184
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 122/173 (70%), Gaps = 6/173 (3%)
Query: 15 VSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGFYIISYGLGIYLLN 74
V + + A RLY++++D+T P+ YRW+ ++A++ +R+ V+G+YI+ Y L IYLLN
Sbjct: 11 VKEKKNFAVRLYRHWVDRTIPYTTYRWLTVSGLIALFFIRILLVRGWYIVCYTLAIYLLN 70
Query: 75 LLIGFLSPLVDPEIEVA------DGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAF 128
L + FL+P DP +E A + +LPT DEF+PFIRRLPEFKFWYS +A A
Sbjct: 71 LFLAFLTPKFDPSVEQAMKDEEIEEGVLPTSKDDEFRPFIRRLPEFKFWYSSMRATLFAL 130
Query: 129 VMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYGG 181
V +FF +FDVPVFWPIL+ Y++VL RRQI HM+KYRY+PF+IGK+K+G
Sbjct: 131 VASFFRIFDVPVFWPILVVYYLVLSFFCFRRQIQHMLKYRYVPFDIGKKKFGS 183
>sp|P25560|RER1_YEAST Protein RER1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=RER1 PE=1 SV=2
Length = 188
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 127/184 (69%), Gaps = 4/184 (2%)
Query: 1 MEGIGGDTAS--AASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYV 58
M+ DT + +++P+ + LYQ+YLDK TPHA RW +L ++ +R+
Sbjct: 1 MDYDSSDTMNGGSSNPLITKMNTMKLLYQHYLDKVTPHAKERWAVLGGLLCLFMVRITMA 60
Query: 59 QGFYIISYGLGIYLLNLLIGFLSPLVDPEIEV--ADGPLLPTKGSDEFKPFIRRLPEFKF 116
+G+Y+I YGLG++LLN + FL+P D ++ + L + S+EF+PFIRRLPEFKF
Sbjct: 61 EGWYVICYGLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKF 120
Query: 117 WYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGK 176
WY+ +A I+ +++ FS+FD+PVFWPILL Y+I+LF LTMRRQI HMIKYRYIP +IGK
Sbjct: 121 WYNSIRATVISLLLSLFSIFDIPVFWPILLMYFILLFFLTMRRQIQHMIKYRYIPLDIGK 180
Query: 177 QKYG 180
+KY
Sbjct: 181 KKYS 184
>sp|P79003|RER1_SACPS Protein RER1 OS=Saccharomyces pastorianus GN=RER1 PE=3 SV=1
Length = 188
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 126/176 (71%), Gaps = 3/176 (1%)
Query: 7 DTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQGFYIISY 66
+ AS+ + +++ + A LYQ+YLDK TPHA RW +L ++ +R+ +G+Y+I Y
Sbjct: 10 NGASSNALIAKM-NSAKLLYQHYLDKVTPHAKQRWAVLGGLLCLFMVRITMAEGWYVICY 68
Query: 67 GLGIYLLNLLIGFLSPLVDPEIEV--ADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAF 124
GLG++LLN + FL+P D ++ + L + S+EF+PFIRRLPEFKFWY+ +A
Sbjct: 69 GLGLFLLNQFLAFLTPKFDMSLQQDEENNELEAGEKSEEFRPFIRRLPEFKFWYNSIRAT 128
Query: 125 CIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYG 180
I+ V++ FS+FD+PVFWPILL Y+++LF LTMRRQI HM+KYRYIP +IGK+KY
Sbjct: 129 VISLVLSLFSIFDIPVFWPILLMYFVLLFFLTMRRQIQHMMKYRYIPLDIGKKKYS 184
>sp|Q54D10|RER1_DICDI Protein RER1 homolog OS=Dictyostelium discoideum GN=rer1 PE=3 SV=1
Length = 188
Score = 152 bits (384), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 104/164 (63%), Gaps = 4/164 (2%)
Query: 24 RLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQG-FYIISYGLGIYLLNLLIGFLSP 82
R YQ ++KT RW + +Y LRV G +Y+I+Y LGI+LL I FLSP
Sbjct: 24 RKYQNLIEKTISFIPQRWAFVGFLSFLYILRVSLSSGGWYVITYALGIFLLTRFIAFLSP 83
Query: 83 LVDPEIEVADGPLLPT---KGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVP 139
DPE+E G LPT + DE KPFIRRLPEF FW+S+ KA I+ TF D+P
Sbjct: 84 KWDPELEEDSGDSLPTTLNRNDDEAKPFIRRLPEFLFWHSIFKALFISIFCTFIPFLDLP 143
Query: 140 VFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFNIGKQKYGGKK 183
VFWPILL Y+I++F +TM++QI HMIKY+YIPF +GK+ Y
Sbjct: 144 VFWPILLLYFIIIFSVTMKKQIKHMIKYKYIPFTVGKKTYTKNN 187
>sp|Q2M3M2|SC5A9_HUMAN Sodium/glucose cotransporter 4 OS=Homo sapiens GN=SLC5A9 PE=2 SV=2
Length = 681
Score = 31.2 bits (69), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 18/154 (11%)
Query: 42 IGTLVILAIYCLRVFYVQGFYIISYGLGIYLLNLLIGFLSPLVDPEIEVADGPLLPTKGS 101
I L +LAI+C RV F+ + +GLG+ LL +++ F P P G
Sbjct: 471 ITALFLLAIFCKRVTEPGAFWGLVFGLGVGLLRMILEFSYP-------------APACGE 517
Query: 102 DEFKPFIRRLPEFKFWY-SMTKAFCIAFVMTFFSVFDVPVFWPIL--LCYWIVLFVLTMR 158
+ +P + L +F + Y ++ A V+ S+ P+ L L +W L+
Sbjct: 518 VDRRPAV--LKDFHYLYFAILLCGLTAIVIVIVSLCTTPIPEEQLTRLTWWTRNCPLSEL 575
Query: 159 RQIAHMIKYRYIPFNIGKQKYGGKKPSSSGGGSR 192
+ AH G+ GG +S G
Sbjct: 576 EKEAHESTPEISERPAGECPAGGGAAENSSLGQE 609
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.147 0.487
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,257,081
Number of Sequences: 539616
Number of extensions: 3274456
Number of successful extensions: 7978
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 7947
Number of HSP's gapped (non-prelim): 23
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 58 (26.9 bits)