BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029376
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 283 bits (725), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 135/161 (83%), Positives = 147/161 (91%), Gaps = 2/161 (1%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVL 61
MS ELL +EP +LQFPFEL+KQISCSL L+NKTDN VAFKVKTTNPKKYCVRPNTGVVL
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76
Query: 62 PRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECK 121
PRSTC+V+VTMQ+QKEAP DMQCKDKFLLQGV+ASPG TAK++TPEMF+KEAGH VEE K
Sbjct: 77 PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136
Query: 122 LRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFS 162
LRV YVAPPRPPSPVHEGSEEGSSPRASVSDNG+ SEFS
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGH--GSEFS 175
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 273 bits (699), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/178 (76%), Positives = 154/178 (86%), Gaps = 3/178 (1%)
Query: 4 TGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
+ ELL I+P +LQFPFEL+KQISCSL L NKTDNYVAFKVKTTNPKKYCVRPNTGVV PR
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLR 123
S+ +V+VTMQ+QKEAP D+QCKDKFLLQ VVASPGAT KD+T EMF+KEAGH VEE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 124 VLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDKSTE 181
V+YVAPPRPPSPV EGSEEGSSPRASVSDNGN AS+F+AA R ++ + QD S+E
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGN--ASDFTAAP-RFSADRVDAQDNSSE 176
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/168 (65%), Positives = 131/168 (77%), Gaps = 9/168 (5%)
Query: 4 TGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
+ ELL I+P ++QFP EL K++SCSL L+NKT+NYVAFK KTTN KKY VRPN GVVLPR
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLR 123
S+C+V+V MQ+ KEAP DMQC+DK L Q V P TAKD+T EMF+KEAGH EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 124 VLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVE 171
V+YV PP+PPSPV EG+EEGSSPRASVSDNGN AS AFV+
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGN---------ASEAFVD 331
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 126/177 (71%), Gaps = 2/177 (1%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVL 61
MST ELL + +++FP EL KQ SCSL L+NKTDNYVAFK +TT PK YCV+P+ GVVL
Sbjct: 1 MSTDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVL 60
Query: 62 PRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECK 121
PRS+C+V+V MQ+ KEAP D QCKDK L Q V PG K++T EMF+KEAGH VEE
Sbjct: 61 PRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETI 120
Query: 122 LRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYEPQDK 178
+++YVAPP+P SPV EG E+GSSP ASVSD GN ASE S V+ D+
Sbjct: 121 FKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGN--ASEVFVGPSVGIVDLIRMSDE 175
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 224 bits (570), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 137/174 (78%), Gaps = 3/174 (1%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNY-VAFKVKTTNPKKYCVRPNTGVV 60
M+TG+L+NI P EL+FPFEL+KQ SCS+QL+NKT VAFKVKTTNP+KYCVRPNTGVV
Sbjct: 1 MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60
Query: 61 LPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEEC 120
LP +C+V VTMQ+QKEAP DMQCKDKFL+Q VV S G T+K++ EMFNKEAG +E+
Sbjct: 61 LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120
Query: 121 KLRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASRAFVEQYE 174
KLRV+Y+ P PPSPV EGSEEG+SP AS++D + SAS F SR F E E
Sbjct: 121 KLRVVYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASLFD-DVSRTFEETSE 172
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/127 (69%), Positives = 104/127 (81%)
Query: 2 MSTGELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVL 61
MS ELL IEP LQFPFEL+KQ+SCSL L+NKTDN VAFKVKTTN YCVRPN G++L
Sbjct: 1 MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60
Query: 62 PRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECK 121
P+STC V+VTMQ+QKE P DMQ +KF++Q V+ASPG TAK++T EMF+KE+GH VEE K
Sbjct: 61 PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120
Query: 122 LRVLYVA 128
LRV YV
Sbjct: 121 LRVTYVC 127
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 162 bits (409), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 107/156 (68%), Gaps = 3/156 (1%)
Query: 7 LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTC 66
LL+I+P+ LQF +L+KQ SC +QL+N T +YVAFKVKTT+PKKYCVRPN GVV P+STC
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 67 DVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLY 126
+ V MQ+ KE PPDM CKDKFL+Q S T +DIT MF+K G H+EE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 127 VAPPRPP--SPVHEGSEEGSSPRASVSDNGNFSASE 160
V P P SP++ ++G+ S+ + +S SE
Sbjct: 125 VPPSDSPELSPIN-TPKQGAVFEDSILKDRLYSQSE 159
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 109/169 (64%), Gaps = 13/169 (7%)
Query: 1 MMSTGE--LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTG 58
M GE L++I+P EL+F FEL KQ C L+++NKT+NYVAFKVKTT+PKKY VRPNTG
Sbjct: 1 MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60
Query: 59 VVLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVE 118
V+ P +C + VT+Q+Q+E PPDMQCKDKFLLQ + P ++ + F K++G +
Sbjct: 61 VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120
Query: 119 ECKLRVLYVAPPRPPSPVHEGSEEGSSPRASVSDNGNFSASEFSAAASR 167
ECKL+V Y+ PS SE G++ NG+ +SE + R
Sbjct: 121 ECKLKVSYIT----PSTTQRSSESGAT-------NGDGQSSETISTIQR 158
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 7/127 (5%)
Query: 39 VAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP-PDMQCKDKFLLQGVVASP 97
V FKVKTT PK YCVRPN+G + P+ST +V V +Q+ KE P PD +C+DKFL+Q +
Sbjct: 33 VIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGD 92
Query: 98 GATAKDITPEMFNKEA---GHHVEECKLRVLYVAPPRPPSPVHEGSEEGSS--PRASVSD 152
T+ F E G + + K+R +Y + +PP + E S+ P SV
Sbjct: 93 ADTSNVENYHEFWTEMEKQGRSIFDRKIRCVY-STKQPPQSADKQVENTSTSNPPVSVEG 151
Query: 153 NGNFSAS 159
+ N ++S
Sbjct: 152 SENLASS 158
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 15 LQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQS 74
+ FP L + + C L+L N + FKVKTT PK+YCVRPN G + S V V +Q
Sbjct: 9 IVFPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQP 68
Query: 75 QKEAP-PDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLY 126
P P +C+DKFL+Q P DI +++ + + ++ E K+R +Y
Sbjct: 69 LDHEPAPGTKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVY 120
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+GV
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGV 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P + D+ E KEA +
Sbjct: 61 IDAGASLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS--DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAP 129
+ KLR ++ P
Sbjct: 116 DSKLRCVFELP 126
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 26/170 (15%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M S + L +EP EL+F ++ L+LSN TD + FKVKTT PK+YCVRPN+G+
Sbjct: 1 MASHEQALILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQG------VVASPGATAKDITPEMFNKEA 113
+ P+++ V V +Q P+ + K KF++Q VV S KD PE
Sbjct: 61 LEPKTSIAVAVMLQPFNYD-PNEKNKHKFMVQSMYAPDHVVESQELLWKDAPPE------ 113
Query: 114 GHHVEECKLRVLYVAPPRPPSPVHEGSEEGSSPRAS-VSDNG-NFSASEF 161
+ + KLR ++ P +GS + + AS +D G +FS S
Sbjct: 114 --SLMDTKLRCVFEMP--------DGSHQAPASDASRATDAGAHFSESAL 153
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 7/137 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+GV
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGV 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P + D+ E KEA +
Sbjct: 61 IDAGASLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS--DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAPPRPPSP 135
+ KLR ++ P P
Sbjct: 116 DSKLRCVFELPAENAKP 132
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P ST V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTSDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPR-ASVSDN 153
P P++ ++G P+ SVS N
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P ST V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTSDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPR-ASVSDN 153
P P++ ++G P+ SVS N
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+GV+ P S V V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNISDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPR-ASVSDN 153
P P++ ++G P+ SVS N
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G+
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P T+ D+ E KEA +
Sbjct: 61 IDAGASINVSVMLQPF-DYDPNEKSKHKFMVQSMFA-PTDTS-DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAPPRPPSP 135
+ KLR ++ P P
Sbjct: 116 DSKLRCVFELPAENDKP 132
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P T V V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNISDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPR---ASVSD 152
P P++ ++G P+ S+SD
Sbjct: 135 ENDKLNDMEPSKAVPLNAAKQDGPVPKPHSVSLSD 169
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 12 PQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
P +L+F ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P S V V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 72 MQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVEECKLRVLYVAP- 129
+Q + P+ + K KF++Q + A P + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNISDM----EAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 130 ---------PRPPSPVHEGSEEGSSPR-ASVSDN 153
P P++ ++G P+ SVS N
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G+
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P T+ D+ E KEA +
Sbjct: 61 IDAGASINVSVMLQPF-DYDPNEKSKHKFMVQSMFA-PADTS-DM--EAAWKEAKPEDLM 115
Query: 119 ECKLRVLYVAP 129
+ KLR ++ P
Sbjct: 116 DSKLRCVFELP 126
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
M ++L++EPQ EL+F ++ +L+L N TD V FKVKTT P++YCVRPN+G+
Sbjct: 1 MAKVEQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI 60
Query: 60 VLPRSTCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAG-HHVE 118
+ ++ +V V +Q + P+ + K KF++Q + A P T+ D+ E KEA +
Sbjct: 61 IDAGASINVSVMLQPF-DYDPNEKSKHKFMVQSMFA-PTDTS-DM--EAVWKEAKPEDLM 115
Query: 119 ECKLRVLYVAPPRPPSP 135
+ KLR ++ P P
Sbjct: 116 DSKLRCVFELPAENDKP 132
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS2 PE=1 SV=3
Length = 244
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 8 LNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 67
+ I P L + L +Q + +SN +D +AFKVKTT PK YCVRPN VV P T
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 68 VIVTMQSQKEAP-PDMQCKDKFLL 90
V V E P D +C+DKFL+
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLV 87
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 14/139 (10%)
Query: 1 MMSTGELLNIEPQE-LQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
+ T L ++P E L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP +
Sbjct: 101 FLPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAI 160
Query: 60 VLPRSTCDVIVTM------QSQKEAPPDMQCKDKFLLQGV-VASPGATAKDITPEMFNKE 112
+ P T +I T+ E P D + + KF + + V P D PE+F+++
Sbjct: 161 LAPGET--IIATVFKFVEPPENNEKPMDQRSRVKFKIMSLKVKGP----MDYVPELFDEQ 214
Query: 113 AGHHVEECKLRVLYVAPPR 131
+E LRV+++ P R
Sbjct: 215 KDDVSKEQILRVIFLDPER 233
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 15 LQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTM-- 72
L FP+E KQ+ +++L N + ++ AFK +TT PK +RP GV+ P + V
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 73 ---QSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHHVEECKLRVLYVAP 129
++ ++ P + + K KF + + PG + PE+F+++ E LRV+++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFIDA 201
Query: 130 PRP 132
RP
Sbjct: 202 DRP 204
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 1 MMSTGELLNIEPQ-ELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGV 59
++ T L ++P +L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP +
Sbjct: 93 LLPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAI 152
Query: 60 VLPR----STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGH 115
+ P +T V E P + + KF + + D PE+F ++ H
Sbjct: 153 LAPGEEIIATVFKFVEPPENNEKPMEQKSGVKFKIMSLKMK---VPTDYMPELFEEQKDH 209
Query: 116 HVEECKLRVLYVAPPRPPS 134
EE +RV+++ P P S
Sbjct: 210 VSEEQVMRVVFLDPENPNS 228
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 8 LNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 67
+ I P++L F L KQ + ++L N + V FKV+T+ P KYCVRPN ++ + +
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 68 V-IVTMQSQKEAPPDM--QCKDKFLLQGV---VASPGATAKDITPEMFNKEAGHHVEEC- 120
V IV + K D Q +DKFL+ + A ++ + N E + +
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTLPIPAAYQNVEDGELLSDWPNLEEQYKDDIVF 120
Query: 121 -KLRVLY-VAPPRPPSPVHEGSEEGSSPRASVSDNG 154
K+++ + V P R PS G+ + S RA + NG
Sbjct: 121 KKIKIFHSVLPKRKPS----GNHDAESARAPSAGNG 152
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 5 GELLNIEP-QELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
G LL+I P +EL F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEA-GHHVEECKL 122
++ D+IV+ + +D+FL+ + F KE + V E +L
Sbjct: 385 ASIDIIVS----PHGGLTVSAQDRFLIMAAEMEQSSGTGPAELSQFWKEVPRNKVMEHRL 440
Query: 123 RVLYVAPPRPPSPVHEGSEEGSSPRAS 149
R V +P S + + S S + S
Sbjct: 441 RCHTVESSKPNSLMLKDSISTMSDKTS 467
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 5 GELLNIEP-QELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPR 63
G LL+I P +EL F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 64 STCDVIVTMQSQKEAPPDMQCKDKFLLQG--VVASPGATAKDITPEMFNKEA-GHHVEEC 120
++ D++V+ + +D+FL+ + S G ++T F KE + V E
Sbjct: 385 ASVDIVVS----PHGGLTVSAQDRFLIMAAEMEQSSGTGPAELT--QFWKEVPRNKVMEH 438
Query: 121 KLRVLYVAPPRP 132
+LR V +P
Sbjct: 439 RLRCHTVESSKP 450
>sp|P34538|YNC5_CAEEL Uncharacterized protein R05D3.5 OS=Caenorhabditis elegans
GN=R05D3.5 PE=2 SV=3
Length = 178
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 10 IEPQELQFP-FELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDV 68
++ Q+++F E RK IS +L+L N T V++KV+ T+ + V+P G V P T +
Sbjct: 65 LQVQKVEFKCTEDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSI 124
Query: 69 IVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDI 104
++ Q+Q + D K+ + S G TA+++
Sbjct: 125 VIWYQNQDKK--DAISKNHYFAFYHTNSDGRTAREL 158
>sp|P34593|YOD1_CAEEL Uncharacterized protein ZC262.1 OS=Caenorhabditis elegans
GN=ZC262.1 PE=4 SV=1
Length = 131
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 20 ELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAP 79
E RK IS +L+L N T V++KV+ T+ + V+P G V P T +++ Q+Q +
Sbjct: 29 EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVSIVIWYQNQDK-- 86
Query: 80 PDMQCKDKFLLQGVVASPGATAKDI 104
D K+ + S G TA+++
Sbjct: 87 KDAISKNHYFAFYHTNSDGRTAREL 111
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2
SV=2
Length = 126
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 35/67 (52%)
Query: 5 GELLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRS 64
G++ + Q++ F + + +++ N N + F KTT PK+ + P GV+ P+
Sbjct: 7 GDIATMPNQKVVFNAPFDNKATYYVRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKE 66
Query: 65 TCDVIVT 71
+ +V ++
Sbjct: 67 SVNVAIS 73
>sp|Q8BGG6|MSPD3_MOUSE Motile sperm domain-containing protein 3 OS=Mus musculus GN=Mospd3
PE=2 SV=1
Length = 235
Score = 33.9 bits (76), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N T + F+V T P KY V G V P+S D+++ + P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI--RHVAPVPSHYDVQDRF 112
Query: 89 LLQ 91
++
Sbjct: 113 RIE 115
>sp|Q3T033|MSPD3_BOVIN Motile sperm domain-containing protein 3 OS=Bos taurus GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N T + F+V T P KY V G V P+S D+++ + P + +D+F
Sbjct: 55 LTLYNPTGAVLRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI--RHVAPHPRNYDVQDRF 112
Query: 89 LLQ 91
++
Sbjct: 113 RIE 115
>sp|O75425|MSPD3_HUMAN Motile sperm domain-containing protein 3 OS=Homo sapiens GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 33.5 bits (75), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N T + F+V T P KY V G V P+S D+++ + P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVI--RHVAPIPSHYDVQDRF 112
Query: 89 LLQGVVASPGATA-----KDIT 105
++ ++ GA KDIT
Sbjct: 113 RIE--LSEEGAEGRVVGRKDIT 132
>sp|O45433|SSP32_CAEEL Sperm-specific class P protein 32 OS=Caenorhabditis elegans
GN=ssp-32 PE=2 SV=1
Length = 107
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 7 LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRS 64
+L IEP FP S + +++ ++ +AFKVK++N + Y VRP G V R
Sbjct: 1 MLTIEPPSATFP---ASGGSSTHTITSVNESRMAFKVKSSNNEHYRVRPVYGFVEARG 55
>sp|P86839|NEST_DANRE Nestin OS=Danio rerio GN=nes PE=2 SV=1
Length = 1265
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 80 PDMQCKDKFLLQGVVASPGATAKDITPEMFNKEAGHH 116
PDM+ K L+ +V++ A A D+ MF K +G H
Sbjct: 827 PDMEVTGKMRLEDLVSNEEAAADDVASVMFQKVSGDH 863
>sp|O01829|SSP19_CAEEL Sperm-specific class P protein 19 OS=Caenorhabditis elegans
GN=ssp-19 PE=1 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 25 ISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
+S + +L N + FK+K++N +Y + P G V P + DV++T
Sbjct: 17 VSSTHKLVNGGAEKIVFKIKSSNNNEYRIAPVFGFVDPSGSKDVVIT 63
>sp|P27439|MSP1_ASCSU Major sperm protein isoform alpha OS=Ascaris suum PE=1 SV=3
Length = 127
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 8 LNIEP-QELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTC 66
+N +P Q++ F + + ++++N + + +KTTN ++ V P GV+ P+
Sbjct: 10 INTQPSQKIVFNAPYDDKHTYHIKITNAGGRRIGWAIKTTNMRRLSVDPPCGVLDPKEKV 69
Query: 67 DVIVTMQSQKEAPPDMQCKDKFLLQGVVASPGATAKDITPEMFNKEA 113
+ V+ + A D+ D+ ++ +P AK E F +
Sbjct: 70 LMAVSCDTFNAATEDLN-NDRITIEW-TNTPDGAAKQFRREWFQGDG 114
>sp|Q23246|SSPZC_CAEEL Sperm-specific protein ZC168.6 OS=Caenorhabditis elegans
GN=ZC168.6 PE=1 SV=1
Length = 107
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 7 LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVV 60
++N++P +P + + +++++D+ +AFKVK++N + Y VRP G V
Sbjct: 1 MINVDPPTGNYP---ATGGNSTHNITSESDSRLAFKVKSSNNEHYRVRPVYGFV 51
>sp|P27440|MSP2_ASCSU Major sperm protein isoform beta OS=Ascaris suum PE=1 SV=3
Length = 127
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
++++N + + +KTTN ++ V P GV+ P+ + + V+ + A D+ D+
Sbjct: 32 IKITNAGGRRIGWAIKTTNMRRLGVDPPCGVLDPKESVLMAVSCDTFNAATEDLN-NDRI 90
Query: 89 LLQGVVASPGATAKDITPEMFNKEA 113
++ +P AK E F +
Sbjct: 91 TIE-WTNTPDGAAKQFRREWFQGDG 114
>sp|Q9XXL3|SSP31_CAEEL Sperm-specific class P protein 31 OS=Caenorhabditis elegans
GN=ssp-31 PE=1 SV=1
Length = 107
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 7 LLNIEPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVV 60
++NI+P +P S + + +++++ +AFKVK++N + Y VRP G V
Sbjct: 1 MINIDPPSGDYP---ASGGSSTHYIVSESESRLAFKVKSSNNESYRVRPVYGFV 51
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 31.2 bits (69), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N + + FKV T P KY V G V P+ D+++ + + + DKF
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIVIRHRDVRSCHYGV--IDKF 95
Query: 89 LLQ 91
LQ
Sbjct: 96 RLQ 98
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N + + FKV T P KY V G V P+ D+++ + + + DKF
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKPQCCVDIVIRHRDVRSCHYGV--IDKF 95
Query: 89 LLQ 91
LQ
Sbjct: 96 RLQ 98
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 31.2 bits (69), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N + + FKV T P KY V G V P+ D+++ + + DKF
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIVIRHRDVRSC--HYGVIDKF 95
Query: 89 LLQ 91
LQ
Sbjct: 96 RLQ 98
>sp|Q21289|SSP10_CAEEL Sperm-specific class P protein 10 OS=Caenorhabditis elegans
GN=ssp-10 PE=2 SV=1
Length = 109
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 26 SCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
S + +L N + FK+K++N +Y + P G V P + DV++T
Sbjct: 18 SSTHKLVNGGAEKIIFKIKSSNNNEYRIAPVFGFVDPSGSKDVVIT 63
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N + + FKV T P KY V G V P+ D+++ + + DKF
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKPQCCVDIVIRHRDVRSC--HYGVIDKF 95
Query: 89 LLQ 91
LQ
Sbjct: 96 RLQ 98
>sp|Q23058|SSP9_CAEEL Sperm-specific class P protein 9/11 OS=Caenorhabditis elegans
GN=ssp-9 PE=2 SV=1
Length = 109
Score = 30.8 bits (68), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 26 SCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVT 71
S + +L N + FK+K++N +Y + P G V P + DV++T
Sbjct: 18 SSTHKLVNGGAEKIIFKIKSSNNNEYRIAPVFGFVDPAGSKDVVIT 63
>sp|Q2T9W7|MSPD1_BOVIN Motile sperm domain-containing protein 1 OS=Bos taurus GN=MOSPD1
PE=2 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 29 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDVIVTMQSQKEAPPDMQCKDKF 88
L L N + + FKV T P KY V G V P+ D+++ + + DKF
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCMDIVIRHRDVRSC--HYGVIDKF 95
Query: 89 LLQ 91
LQ
Sbjct: 96 RLQ 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,598,764
Number of Sequences: 539616
Number of extensions: 3016278
Number of successful extensions: 6708
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 6646
Number of HSP's gapped (non-prelim): 73
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)