BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029379
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52760|UK114_MOUSE Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3
Length = 135
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 95/129 (73%), Gaps = 4/129 (3%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQV 120
S +++ + T KAPAA+GPYSQA++ + +++SG +GL P S G+ V + ++ +Q
Sbjct: 3 SIIRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSS----GQLVPGGVVEEAKQA 58
Query: 121 LKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLD 180
LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP
Sbjct: 59 LKNLGEILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRG 118
Query: 181 ARVEIECIA 189
+RVEIE IA
Sbjct: 119 SRVEIEAIA 127
>sp|P52758|UK114_HUMAN Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1
Length = 137
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
++ + T KAP A+GPYSQA+ + +++SG +G+ P S G+ VS + ++ +Q LK
Sbjct: 5 IRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSS----GQLVSGGVAEEAKQALK 60
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 182
N+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S PARA YQVAALP +R
Sbjct: 61 NMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSR 120
Query: 183 VEIECIA 189
+EIE +A
Sbjct: 121 IEIEAVA 127
>sp|Q10121|YSD2_CAEEL RutC family protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2
PE=3 SV=3
Length = 171
Score = 140 bits (353), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
++ + + AP A+GPYSQA++A N +++SG LGL P +TG +E QT Q LKN
Sbjct: 41 RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDP----KTGDLKEGVVE-QTHQSLKN 95
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
+GE+LKA+GADY +VVKTT+LL ++ DF VNE+Y +YF SP PARA YQVAALP V
Sbjct: 96 LGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLV 155
Query: 184 EIECIA 189
EIE +A
Sbjct: 156 EIEAVA 161
>sp|P52759|UK114_RAT Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3
Length = 137
Score = 139 bits (351), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 94/129 (72%), Gaps = 4/129 (3%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQV 120
S +++ + T+KAPAA+G YSQA+ + ++VSG +G+ P S G+ V + ++ +Q
Sbjct: 3 SIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSS----GQLVPGGVAEEAKQA 58
Query: 121 LKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLD 180
LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP
Sbjct: 59 LKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKG 118
Query: 181 ARVEIECIA 189
+R+EIE IA
Sbjct: 119 SRIEIEAIA 127
>sp|Q3T114|UK114_BOVIN Ribonuclease UK114 OS=Bos taurus GN=HRSP12 PE=2 SV=3
Length = 137
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQV 120
S +++ + T KAPAA+GPYSQA+ + +++SG LG+ P S G+ V + ++ +Q
Sbjct: 3 SLVRKIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPAS----GQLVPGGVAEEAKQA 58
Query: 121 LKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLD 180
L NIGEILKA+G D+++VVK T+LLAD+ DF TVN++Y +YF S PARA YQVAALP
Sbjct: 59 LTNIGEILKAAGCDFTNVVKATVLLADINDFSTVNDVYKQYFQSSFPARAAYQVAALPKG 118
Query: 181 ARVEIECIA 189
RVEIE IA
Sbjct: 119 GRVEIEAIA 127
>sp|P80601|UK114_CAPHI Ribonuclease UK114 OS=Capra hircus GN=HRSP12 PE=1 SV=3
Length = 137
Score = 136 bits (342), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 91/129 (70%), Gaps = 4/129 (3%)
Query: 61 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQV 120
S ++ + T KAPAA+GPYSQA+ + +++SG LG+ P S G+ V + ++ +Q
Sbjct: 3 SLVRRIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPAS----GQLVPGGVVEEAKQA 58
Query: 121 LKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLD 180
L NIGEILKA+G D+++VVK T+LLAD+ DF VN++Y +YF S PARA YQVAALP
Sbjct: 59 LTNIGEILKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKG 118
Query: 181 ARVEIECIA 189
RVEIE IA
Sbjct: 119 GRVEIEAIA 127
>sp|Q9ZKQ6|Y944_HELPJ RutC family protein jhp_0879 OS=Helicobacter pylori (strain J99)
GN=jhp_0879 PE=3 SV=1
Length = 125
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 82/127 (64%), Gaps = 4/127 (3%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+KE + + AP A+GPYSQAI N+LVFVSG LG+ TG+F I QT Q ++
Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGI----DVSTGEFKGADIHSQTTQSME 56
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 182
NI ILK +G SVVKTTILL L DF VN IY YF P PARAT+QVA LP DA
Sbjct: 57 NIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDAL 116
Query: 183 VEIECIA 189
VEIE IA
Sbjct: 117 VEIEAIA 123
>sp|O25598|Y944_HELPY RutC family protein HP_0944 OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=HP_0944 PE=3 SV=1
Length = 125
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 82/127 (64%), Gaps = 4/127 (3%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+KE + + AP A+GPYSQAI N+LVFVSG LG+ TG+F I QT Q ++
Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGI----DVSTGEFKGADIHSQTTQSME 56
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 182
NI ILK +G SVVKTTILL L DF VN IY YF P PARAT+QVA LP DA
Sbjct: 57 NIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDAL 116
Query: 183 VEIECIA 189
VEIE IA
Sbjct: 117 VEIEAIA 123
>sp|P55654|Y4SK_RHISN RutC family protein y4sK OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01620 PE=3 SV=1
Length = 126
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 84/127 (66%), Gaps = 4/127 (3%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNI 124
E + TN AP A+GPYSQAIK +L+FVSG L + P TG+F S +Q EQ LKN+
Sbjct: 3 EPISTNDAPGAVGPYSQAIKVGDLLFVSGQLPIDP----ATGEFNSANAVEQAEQCLKNL 58
Query: 125 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE 184
I +A+G D S VKTT+LL DL DF +N +Y +F +P PARA Y+V ALP A+VE
Sbjct: 59 QAIARAAGTDLSKTVKTTVLLTDLGDFADINRVYTGFFSTPYPARACYEVKALPKGAKVE 118
Query: 185 IECIAAL 191
IE + +L
Sbjct: 119 IEAVISL 125
>sp|O58584|Y854_PYRHO RutC family protein PH0854 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH0854 PE=1 SV=2
Length = 126
Score = 120 bits (302), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 83/127 (65%), Gaps = 4/127 (3%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+KE + T AP +GPYSQAIKA N +F++G + + P +TG+ V I+DQT QVL+
Sbjct: 1 MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDP----KTGEIVKGDIKDQTRQVLE 56
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 182
NI IL+A+G + V+K T+ L D+ DF +NE+YA+YF PAR +V+ LP D
Sbjct: 57 NIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVL 116
Query: 183 VEIECIA 189
+EIE IA
Sbjct: 117 IEIEAIA 123
>sp|P37552|RIDA_BACSU Enamine/imine deaminase OS=Bacillus subtilis (strain 168) GN=yabJ
PE=1 SV=3
Length = 125
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 84/127 (66%), Gaps = 5/127 (3%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+ +AV T APAA+GPYSQ I NN+ + SG + L P +G+ V+ I++QT QV
Sbjct: 1 MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTP-----SGEMVNGDIKEQTHQVFS 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 182
N+ +L+ +GA + +VVK T+ +AD++ F VNE+Y +YF + PAR+ +VA LP DA
Sbjct: 56 NLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDAL 115
Query: 183 VEIECIA 189
VEIE IA
Sbjct: 116 VEIEVIA 122
>sp|Q9UZA3|Y1251_PYRAB RutC family protein PYRAB12510 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB12510 PE=3 SV=1
Length = 127
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
KE + T KAP +GPYSQAIK N +FV+G + + PE TG+ V I++QT++V++N
Sbjct: 3 KEVIFTEKAPKPIGPYSQAIKVGNFIFVAGQIPIDPE----TGEIVKGDIKEQTKRVIEN 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I IL+ +GA + VVK T+ L DL DF +NE+Y++YF PAR +V+ LP D +
Sbjct: 59 IKAILEEAGASLNDVVKVTVYLKDLNDFAKMNEVYSEYFGESKPARVAVEVSRLPKDVLI 118
Query: 184 EIECIA 189
E+E IA
Sbjct: 119 EMEAIA 124
>sp|Q8U308|RIDA_PYRFU Enamine/imine deaminase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=yjgF PE=1 SV=1
Length = 126
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 82/127 (64%), Gaps = 4/127 (3%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+KE + AP +GPYSQAIKA N +F++G + + P +TG+ V I+ QT QVL+
Sbjct: 1 MKEVIFAENAPKPIGPYSQAIKAGNFLFIAGQIPIDP----KTGEIVKGDIKAQTRQVLE 56
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 182
NI IL+A+G + VVK T+ L D+ DF +NE+YA+YF PARA +V+ LP D
Sbjct: 57 NIKAILEAAGYSLTDVVKVTVYLKDMNDFAKMNEVYAEYFGESKPARAAVEVSRLPKDVL 116
Query: 183 VEIECIA 189
+EIE IA
Sbjct: 117 IEIEAIA 123
>sp|O52178|DFRA_MYXXA Protein DfrA OS=Myxococcus xanthus GN=dfrA PE=3 SV=1
Length = 131
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 6/128 (4%)
Query: 64 KEAVVTNKAPAALGPYSQAIK--ANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVL 121
++A+ +++AP A+GPYSQA++ A + F+SG + L P T + V + Q E+V+
Sbjct: 6 RKAIHSDQAPKAIGPYSQAVQVDAGKMTFLSGQIPLDPA----TMEMVQGDVVAQAERVM 61
Query: 122 KNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDA 181
+N+ +L ASG D+S VV+ TI L DL DF VNE+Y +YF PARAT QV+ALP +
Sbjct: 62 ENLKAVLAASGLDFSHVVRCTIFLTDLGDFARVNEVYGRYFTGAPPARATVQVSALPRGS 121
Query: 182 RVEIECIA 189
+VEI+ IA
Sbjct: 122 KVEIDAIA 129
>sp|P52761|Y709_SYNY3 RutC family protein slr0709 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=slr0709 PE=3 SV=1
Length = 130
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 83/127 (65%), Gaps = 4/127 (3%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGE 126
+ T +APA +GPY+QAI AN +F +G + L P++ G+ +E Q +QVL N+G
Sbjct: 6 IQTAQAPAPVGPYNQAIAANGFLFTAGQIALDPQTMTIMGE---GNVEVQAKQVLTNLGA 62
Query: 127 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF-PSPAPARATYQVAALPLDARVEI 185
+L+ +G + +VVKTT+ L D+ DF VN IY +YF + APAR+ +VA LP D VEI
Sbjct: 63 VLQEAGCGWENVVKTTVFLKDMNDFAAVNAIYGQYFDEATAPARSCVEVARLPKDVLVEI 122
Query: 186 ECIAALP 192
+C+A LP
Sbjct: 123 DCVAVLP 129
>sp|Q97U19|Y3206_SULSO RutC family protein SSO3206 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=SSO3206 PE=3 SV=1
Length = 126
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 4/127 (3%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+KE + T KAP +GPYSQ +K ++++VSG + + P +T + V IE+QT +V++
Sbjct: 1 MKEIIFTEKAPKPIGPYSQGVKVGDILYVSGQIPVDP----KTNEVVGKNIEEQTIRVIE 56
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDAR 182
NI +L+A+G VV + + L D+KDF+ NE+Y+KYF + PAR T +V+ LP D
Sbjct: 57 NIKAVLEAAGYMLDDVVMSFVYLKDIKDFQRFNEVYSKYFSNKPPARVTVEVSRLPRDVL 116
Query: 183 VEIECIA 189
+EI IA
Sbjct: 117 IEITVIA 123
>sp|O66689|Y364_AQUAE RutC family protein aq_364 OS=Aquifex aeolicus (strain VF5)
GN=aq_364 PE=3 SV=1
Length = 125
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 7/124 (5%)
Query: 69 TNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGEIL 128
T KAP +GPYSQA++ N +F+SG +G+ PE TGK V + ++Q Q+ KN+ IL
Sbjct: 6 TPKAPVPVGPYSQAVEVNGFLFISGQIGINPE----TGKLV-EGFKEQVIQIFKNVDAIL 60
Query: 129 KASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP--SPAPARATYQVAALPLDARVEIE 186
+ +G ++VK TI + D+K FK +NEIY YF S PAR T V LPL+A VEIE
Sbjct: 61 EEAGLKRENIVKVTIYITDIKKFKELNEIYEDYFKDVSVKPARVTVGVKELPLNAEVEIE 120
Query: 187 CIAA 190
+A
Sbjct: 121 IVAV 124
>sp|O34133|ALDR_LACLA Putative regulator AldR OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=aldR PE=3 SV=2
Length = 126
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGE 126
+ T APAA+GPY Q N L++ SG + L P G+ V D+IE QTEQV+KNI
Sbjct: 4 IATLDAPAAIGPYVQGKIVNGLLYASGQIPLNP----LNGEIVGDSIETQTEQVMKNISA 59
Query: 127 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 186
ILK + +D+ V+KTT L +++DF N IY+K+F PAR+ VA LP + +EIE
Sbjct: 60 ILKEAHSDFDLVIKTTCFLKNIEDFSRFNAIYSKFFDKEFPARSAVGVAGLPKNVLIEIE 119
Query: 187 CIA 189
IA
Sbjct: 120 VIA 122
>sp|P97117|Y142_LEUMC RutC family protein in leuC 5'region OS=Leuconostoc mesenteroides
subsp. cremoris PE=3 SV=1
Length = 130
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K+ V T AP ALGPYSQAI +N +++SG +G+ PE T +F T +Q Q+ N
Sbjct: 3 KKVVSTTTAPKALGPYSQAILNDNTLYISGQIGIDPE----TDEFAGATTAEQAHQIFDN 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA----PARATYQVAALPL 179
I IL + + +VK + D+ DF VN+IYA+YF + + PAR+ QVAALP
Sbjct: 59 IDNILHEAEFSRNDIVKAALFFDDIADFALVNDIYAQYFDTTSVEEFPARSAVQVAALPK 118
Query: 180 DARVEIECIA 189
+A++EIE A
Sbjct: 119 NAKLEIEITA 128
>sp|Q973T6|Y811_SULTO RutC family protein STK_08110 OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=STK_08110 PE=1
SV=1
Length = 125
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 73/124 (58%), Gaps = 4/124 (3%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNI 124
E V T KAP +GPYSQAIK N ++VSG + + P +T + V I+ QT QVL NI
Sbjct: 2 ETVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDP----RTNEIVKGDIKVQTRQVLDNI 57
Query: 125 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVE 184
EI+KA+G S V + L D+ F N +YA+YF PAR T +V+ LP DA +E
Sbjct: 58 KEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLPKDALIE 117
Query: 185 IECI 188
I I
Sbjct: 118 IAVI 121
>sp|O43003|MMF1_SCHPO Protein mmf1, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf1 PE=3 SV=1
Length = 162
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 9/116 (7%)
Query: 77 GPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYS 136
GPY+QAIKAN +++ SG + P GK + T+ DQT Q L N+ E+L +G+ +
Sbjct: 51 GPYNQAIKANGVIYCSG------QIPVANGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLN 104
Query: 137 SVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLD---ARVEIECIA 189
+VK I LAD+ DF VN++Y + P P PAR+ V +PL ++EIECIA
Sbjct: 105 KIVKVNIFLADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPLSTQGVKIEIECIA 160
>sp|P40185|MMF1_YEAST Protein MMF1, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MMF1 PE=1 SV=1
Length = 145
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGE 126
V T AP A YSQA+KANN V+VSG + P++ K V +I ++ EQV +N+
Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDN-----KPVQGSISEKAEQVFQNVKN 78
Query: 127 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIE 186
IL S + ++VK + LAD+K+F N +YAK+F + PAR+ VA+LPL+ +E+E
Sbjct: 79 ILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEME 138
Query: 187 CIAALPN 193
IA N
Sbjct: 139 VIAVEKN 145
>sp|Q9UR06|MMF2_SCHPO Protein mmf2, mitochondrial OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mmf2 PE=3 SV=1
Length = 126
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 77 GPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYS 136
GPY+QA+K+ L+F SG ++ + G FV TI++QT ++N+ E+L+ +G+
Sbjct: 15 GPYNQAVKSGGLIFCSG------QAAVKDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLE 68
Query: 137 SVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDA---RVEIECIAA 190
+VK I L D+ DF +NE+Y + P P PAR T +PL + ++EIECIAA
Sbjct: 69 KLVKVNIFLTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPLSSKGGKIEIECIAA 125
>sp|P0AGL4|TDCF_SHIFL Putative reactive intermediate deaminase TdcF OS=Shigella flexneri
GN=tdcF PE=3 SV=1
Length = 129
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+K+ + T +AP A+GPY Q + ++VF SG + + P QTG+ +D ++DQ L+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCP----QTGEIPAD-VQDQARLSLE 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA---PARATYQVAALPL 179
N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F P R+ QVA LP
Sbjct: 56 NVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPK 115
Query: 180 DARVEIECIA 189
D ++EIE IA
Sbjct: 116 DVKLEIEAIA 125
>sp|P0AGL2|TDCF_ECOLI Putative reactive intermediate deaminase TdcF OS=Escherichia coli
(strain K12) GN=tdcF PE=1 SV=1
Length = 129
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+K+ + T +AP A+GPY Q + ++VF SG + + P QTG+ +D ++DQ L+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCP----QTGEIPAD-VQDQARLSLE 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA---PARATYQVAALPL 179
N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F P R+ QVA LP
Sbjct: 56 NVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPK 115
Query: 180 DARVEIECIA 189
D ++EIE IA
Sbjct: 116 DVKLEIEAIA 125
>sp|P0AGL3|TDCF_ECOL6 Putative reactive intermediate deaminase TdcF OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=tdcF PE=3
SV=1
Length = 129
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+K+ + T +AP A+GPY Q + ++VF SG + + P QTG+ +D ++DQ L+
Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCP----QTGEIPAD-VQDQARLSLE 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA---PARATYQVAALPL 179
N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F P R+ QVA LP
Sbjct: 56 NVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPK 115
Query: 180 DARVEIECIA 189
D ++EIE IA
Sbjct: 116 DVKLEIEAIA 125
>sp|P40431|YVN1_AZOVI RutC family protein in vnfA 5'region OS=Azotobacter vinelandii PE=3
SV=2
Length = 127
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K + T+KAPAA+G YSQAI+A + V++SG + L P T + V E QT +V +N
Sbjct: 3 KSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDP----GTMELVEGDFEAQTVRVFEN 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
+ +++A+G ++ +VK I L DL F NE +YF P PARA A+LP A+V
Sbjct: 59 LKAVVEAAGGSFADIVKLNIFLTDLAHFANGNECMGRYFAQPYPARAAIACASLPRGAQV 118
Query: 184 EIECIAAL 191
E++ I L
Sbjct: 119 EMDGILVL 126
>sp|P40037|HMF1_YEAST Protein HMF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=HMF1 PE=1 SV=1
Length = 129
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 83 IKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTT 142
+K NNL+F+SG + + P++ K V +I D+ EQV++NI +L+AS + VVK
Sbjct: 24 MKVNNLIFLSGQIPVTPDN-----KLVEGSIADKAEQVIQNIKNVLEASNSSLDRVVKVN 78
Query: 143 ILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAA 190
I LAD+ F N +YAKYF + PAR+ VAALPL +E+E IAA
Sbjct: 79 IFLADINHFAEFNSVYAKYFNTHKPARSCVAVAALPLGVDMEMEAIAA 126
>sp|Q89AG0|Y334_BUCBP RutC family protein bbp_334 OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=bbp_334 PE=3 SV=1
Length = 126
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 77/128 (60%), Gaps = 11/128 (8%)
Query: 65 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNI 124
+ + T+K+P +GPYSQAI+ N F+SG + QT ++ I QT+ +L+NI
Sbjct: 3 KEIHTHKSPKPIGPYSQAIQIKNFTFLSGQIS-------QTDN-INTNISFQTQSILQNI 54
Query: 125 GEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDA 181
IL++ + ++VKTTI + +L D VN++Y K+F PAR+ +V+ LP +A
Sbjct: 55 NYILESKEMNVGNIVKTTIFITNLNDLTIVNDVYQKFFLKYTKTFPARSCVEVSKLPKNA 114
Query: 182 RVEIECIA 189
++EI+ IA
Sbjct: 115 KIEIDAIA 122
>sp|P0AF95|RIDA_SHIFL Enamine/imine deaminase OS=Shigella flexneri GN=yjgF PE=3 SV=2
Length = 128
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+ + + T APAA+GPY Q + N++ SG +P +P +TG+ +D + Q Q L
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSG---QIPVNP-KTGEVPAD-VAAQARQSLD 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA---PARATYQVAALPL 179
N+ I++A+G +VKTT+ + DL DF TVN Y +F PAR+ +VA LP
Sbjct: 56 NVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPK 115
Query: 180 DARVEIECIA 189
D ++EIE IA
Sbjct: 116 DVKIEIEAIA 125
>sp|P0AF93|RIDA_ECOLI Enamine/imine deaminase OS=Escherichia coli (strain K12) GN=ridA
PE=1 SV=2
Length = 128
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+ + + T APAA+GPY Q + N++ SG +P +P +TG+ +D + Q Q L
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSG---QIPVNP-KTGEVPAD-VAAQARQSLD 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA---PARATYQVAALPL 179
N+ I++A+G +VKTT+ + DL DF TVN Y +F PAR+ +VA LP
Sbjct: 56 NVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPK 115
Query: 180 DARVEIECIA 189
D ++EIE IA
Sbjct: 116 DVKIEIEAIA 125
>sp|P0AF94|RIDA_ECOL6 Enamine/imine deaminase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=yjgF PE=3 SV=2
Length = 128
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+ + + T APAA+GPY Q + N++ SG +P +P +TG+ +D + Q Q L
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSG---QIPVNP-KTGEVPAD-VAAQARQSLD 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA---PARATYQVAALPL 179
N+ I++A+G +VKTT+ + DL DF TVN Y +F PAR+ +VA LP
Sbjct: 56 NVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPK 115
Query: 180 DARVEIECIA 189
D ++EIE IA
Sbjct: 116 DVKIEIEAIA 125
>sp|Q7CP78|RIDA_SALTY Enamine/imine deaminase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=ridA PE=1 SV=1
Length = 128
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+ + + T APAA+GPY Q + ++V SG + + P +TG V++ + Q Q L+
Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGSMVITSGQIPVDP----KTGA-VAEDVSAQARQSLE 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPL 179
N+ I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP
Sbjct: 56 NVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPK 115
Query: 180 DARVEIECIA 189
D ++EIE IA
Sbjct: 116 DVKIEIEAIA 125
>sp|Q9L6B5|Y1466_PASMU RutC family protein PM1466 OS=Pasteurella multocida (strain Pm70)
GN=PM1466 PE=3 SV=1
Length = 129
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 79/132 (59%), Gaps = 11/132 (8%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+ + + T+ APAA+GPY QA+ N++ SG + + P +TG+ +D + Q Q L+
Sbjct: 1 MTKVIHTDNAPAAIGPYVQAVDLGNMLLTSGQIPVNP----KTGEVPADIVA-QARQSLE 55
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF-----PSPAPARATYQVAAL 177
N+ I++ +G +++VKTT+ + DL DF VN Y ++F PS PAR+ +VA L
Sbjct: 56 NVKAIVEQAGLQVANIVKTTVFVKDLNDFAAVNAEYERFFKENNHPS-FPARSCVEVARL 114
Query: 178 PLDARVEIECIA 189
P D +EIE IA
Sbjct: 115 PKDVGIEIEAIA 126
>sp|P44839|Y719_HAEIN RutC family protein HI_0719 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0719 PE=1 SV=1
Length = 130
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLK 122
+ + + T KAPAA+GPY QA+ NLV SG + + P TG+ +D + Q Q L+
Sbjct: 2 MTQIIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNP----ATGEVPADIVA-QARQSLE 56
Query: 123 NIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPA----PARATYQVAALP 178
N+ I++ +G + +VKTT+ + DL DF VN Y ++F PAR+ +VA LP
Sbjct: 57 NVKAIIEKAGLTAADIVKTTVFVKDLNDFAAVNAEYERFFKENNHPNFPARSCVEVARLP 116
Query: 179 LDARVEIECIA 189
D +EIE IA
Sbjct: 117 KDVGLEIEAIA 127
>sp|P57452|Y371_BUCAI RutC family protein BU371 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU371 PE=3 SV=1
Length = 128
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 20/136 (14%)
Query: 63 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGL------VPESPFQTGKFVSDTIEDQ 116
+ + T AP +GPYSQA+K +N + +SG + + +PE+ I +Q
Sbjct: 1 MNHIIETKDAPKPIGPYSQALKIDNFIILSGQIPIDVISNQIPEN-----------IAEQ 49
Query: 117 TEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQ 173
T VLKNI IL + +++KTT+ DLK +NEIY K+F S PAR+ +
Sbjct: 50 TYLVLKNIKLILVHAKFQVHNIIKTTVFTTDLKKINIINEIYKKFFIDNKSNFPARSCVE 109
Query: 174 VAALPLDARVEIECIA 189
V LP + ++EIE +A
Sbjct: 110 VQKLPKNVKIEIEAMA 125
>sp|Q8K9H7|Y359_BUCAP RutC family protein BUsg_359 OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=BUsg_359 PE=3 SV=1
Length = 128
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 67 VVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKNIGE 126
V T AP +GPYSQAIK N + +SG + + ++GK + + I +QT VLKNI
Sbjct: 5 VNTENAPKPIGPYSQAIKNENFLIISGQIPI----DVKSGK-IPNNISEQTYIVLKNIKS 59
Query: 127 ILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDARV 183
I+ AS ++K T+ +L+ +NEIY K+F S P R+ +V LP + ++
Sbjct: 60 IIIASKYTIQDIIKITVFTTNLEKIHIINEIYEKFFIDNKSSFPTRSCIEVQKLPKNVKI 119
Query: 184 EIECIA 189
E+E +A
Sbjct: 120 EMEAMA 125
>sp|Q6FFZ5|RUTC_ACIAD Putative aminoacrylate peracid reductase RutC OS=Acinetobacter sp.
(strain ADP1) GN=rutC PE=3 SV=1
Length = 126
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
KE ++ P L PY A KA+N+V+VSG+L P V D QT VL+
Sbjct: 3 KEIILPEGTPPPLAPYVPATKADNIVYVSGIL---PLDENNDVVHVGDAAA-QTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I IL +G V I L D D+ +N++YA+YFP PAR QV + DA +
Sbjct: 59 IKHILSNAGGSLKDVTFNHIFLRDWADYPAINQVYAEYFPEERPARYCVQVGLVKPDALI 118
Query: 184 EIECIAAL 191
EI +A +
Sbjct: 119 EIASVAHV 126
>sp|Q9KWS2|AMND_PSESP 2-aminomuconate deaminase OS=Pseudomonas sp. GN=amnD PE=1 SV=1
Length = 142
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 76 LGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDT------IEDQTEQVLKNIGEILK 129
+G + +A + +FVSG P++ F G DT IE QT +V+ NI +IL+
Sbjct: 19 MGSFPHVKRAGDFLFVSGTSSRRPDNTF-VGAEPDDTGRPRPNIELQTREVISNIRDILQ 77
Query: 130 ASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV-EIECI 188
+ GAD VV+ L ++ DF N++YA++F + PAR T V LP V EI+ +
Sbjct: 78 SVGADLGDVVEVCSYLVNMNDFAAYNKVYAEFFDATGPARTTVAVHQLPHPQLVIEIKVV 137
Query: 189 AALP 192
A P
Sbjct: 138 AYKP 141
>sp|A8IAD2|RUTC_AZOC5 Putative aminoacrylate peracid reductase RutC OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=rutC PE=3 SV=1
Length = 128
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 76 LGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIED--QTEQVLKNIGEILKASGA 133
L PYS ++A+N+++VSG L PF V + QT VL+ I +L+A+G+
Sbjct: 15 LAPYSPGMQADNVIYVSGTL------PFDKDNNVVHLGDAACQTRHVLEIIKGVLEAAGS 68
Query: 134 DYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 189
+ V I L D ++ +N +YA+YFP PAR QV + A VEI IA
Sbjct: 69 GMADVTFNHIFLTDWANYGAINAVYAEYFPGEKPARYCVQVGLVKPGALVEIATIA 124
>sp|D0LI57|RUTC_HALO1 Putative aminoacrylate peracid reductase RutC OS=Haliangium
ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) GN=rutC
PE=3 SV=1
Length = 130
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 73 PAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGK--FVSDTIEDQTEQVLKNIGEILKA 130
P + PYS A+N+V+VSG L L + G+ V D + QT VL+ I L+A
Sbjct: 12 PKPIAPYSAGAMADNVVYVSGTLAL-----GEGGQVLHVGDA-KAQTRHVLETIKTTLEA 65
Query: 131 SGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAA 190
+G + + I + D+K +NE+YA+YFP PAR Q + + VEI IA
Sbjct: 66 AGGGMADITFNHIFVKSWDDYKAINEVYAEYFPGDKPARYCIQCGLVKPELLVEIASIAH 125
Query: 191 L 191
L
Sbjct: 126 L 126
>sp|Q32HQ1|RUTC_SHIDS Putative aminoacrylate peracid reductase RutC OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=rutC PE=3 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|Q1RDK7|RUTC_ECOUT Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain UTI89 / UPEC) GN=rutC PE=3 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|B1LIZ5|RUTC_ECOSM Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=rutC PE=3 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|D2NGI7|RUTC_ECOS5 Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O150:H5 (strain SE15) GN=rutC PE=3 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|P0AFQ5|RUTC_ECOLI Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain K12) GN=rutC PE=1 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|B1IV87|RUTC_ECOLC Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=rutC PE=3 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|P0AFQ6|RUTC_ECOL6 Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=rutC PE=1
SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|Q0TJ57|RUTC_ECOL5 Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=rutC PE=3 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
>sp|D5CZH0|RUTC_ECOKI Putative aminoacrylate peracid reductase RutC OS=Escherichia coli
O18:K1:H7 (strain IHE3034 / ExPEC) GN=rutC PE=3 SV=1
Length = 128
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 64 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPESPFQTGKFVSDTIEDQTEQVLKN 123
K ++ + A L P+ A+ +V+VSG L + +D + QT VL+
Sbjct: 3 KSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHN----NVLFADDPKAQTRHVLET 58
Query: 124 IGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARV 183
I ++++ +G + V +I + D K++ +NEIYA++FP PAR Q + DA V
Sbjct: 59 IRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALV 118
Query: 184 EIECIAAL 191
EI IA +
Sbjct: 119 EIATIAHI 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,842,674
Number of Sequences: 539616
Number of extensions: 2469890
Number of successful extensions: 7661
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 7437
Number of HSP's gapped (non-prelim): 132
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)