BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 029382
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GMF8|RHDF1_DANRE Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1
Length = 857
Score = 121 bits (303), Expect = 4e-27, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G++RI +IY+LSG G++ S +F+ VG +G+ FG+L + EL+ +W +
Sbjct: 685 LEKLAGWLRISIIYILSGITGNLASAIFLPYRAEVGPAGSQFGILACLFVELIQSWQILA 744
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A LL ++ A G+LP +DNFAHI GF++GFFL F LP +G LD
Sbjct: 745 QPWRAFTKLLCVVLFLFAFGLLPWIDNFAHISGFISGFFLSFAFLPYISFGRLDMYR--- 801
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
K Q +++LV + L AGL V + +C WC ++C+P + C
Sbjct: 802 --------KRCQIIIFLVVFLGLFAGLVVLFYV------HPIKCEWCELLTCIPFTDKFC 847
Query: 191 E 191
E
Sbjct: 848 E 848
>sp|Q6PIX5|RHDF1_MOUSE Inactive rhomboid protein 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2
Length = 856
Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G+ RI +IYLLSG G++ S +F+ VG +G+ FG+L + EL +W +
Sbjct: 684 LEKLAGWHRIAIIYLLSGITGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILA 743
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A LL ++ A G+LP +DNFAHI GF++G FL F LP +G D
Sbjct: 744 RPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISGFVSGLFLSFAFLPYISFGKFD------ 797
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
Y+ ++ + +V L + ++ F RC WC +++C+P + C
Sbjct: 798 ------LYRKRCQII-IFQVVFLGLLAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
Query: 191 E 191
E
Sbjct: 847 E 847
>sp|A7YWH9|RHDF1_BOVIN Inactive rhomboid protein 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1
Length = 856
Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G+ RI +IYLLSG G++ S +F+ VG +G+ FG+L + EL +W +
Sbjct: 684 LEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILA 743
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A LL ++ G+LP +DNFAHI GF++G FL F LP +G D
Sbjct: 744 RPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLPYISFGKFD------ 797
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
Y+ ++ + LV L + ++ F RC WC +++C+P + C
Sbjct: 798 ------LYRKRCQII-VFQLVFLGLLAGLVVLFYFYPV----RCEWCEFLTCIPFTDKFC 846
Query: 191 E 191
E
Sbjct: 847 E 847
>sp|Q499S9|RHDF1_RAT Inactive rhomboid protein 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2
SV=1
Length = 856
Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G+ RI +IYLLSG G++ S +F+ VG +G+ FG+L + EL +W +
Sbjct: 684 LEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILA 743
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A LL ++ A G+LP +DNFAHI GF++G FL F LP +G D
Sbjct: 744 RPWRAFFKLLAVVLFLFAFGLLPWIDNFAHISGFVSGLFLSFAFLPYISFGKFD------ 797
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
Y+ ++ ++ L + V L + RC WC +++C+P + C
Sbjct: 798 ------LYRKRCQIIIFQAVFLGLLAGLVVLFYFY-----PVRCEWCEFLTCIPFTDKFC 846
Query: 191 E 191
E
Sbjct: 847 E 847
>sp|A9L8T6|RHDF1_PAPAN Inactive rhomboid protein 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1
Length = 855
Score = 104 bits (260), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 23/195 (11%)
Query: 3 CLVFIGIR------LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLG 56
CLV I + LE+ G+ RI +IYLLSG G++ S +F+ VG +G+ FG+L
Sbjct: 669 CLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILA 728
Query: 57 AMLSELLTNWSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLP 116
+ EL +W + A LL ++ G+LP +DNFAHI GF++G FL F LP
Sbjct: 729 CLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLP 788
Query: 117 RPRYGWLDGRNLPGSAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRW 176
+G D Y+ ++ + +V L + ++ F RC W
Sbjct: 789 YISFGKFD------------LYRKRCQII-IFQVVFLGLLAGLVVLFYFYPV----RCEW 831
Query: 177 CHYMSCVPTSSWNCE 191
C +++C+P + CE
Sbjct: 832 CEFLTCIPFTDKFCE 846
>sp|B1MT31|RHDF1_CALMO Inactive rhomboid protein 1 OS=Callicebus moloch GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 104 bits (260), Expect = 3e-22, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 95/195 (48%), Gaps = 23/195 (11%)
Query: 3 CLVFIGIR------LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLG 56
CLV I + LE+ G+ RI +IYLLSG G++ S +F+ VG +G+ FG+L
Sbjct: 669 CLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILA 728
Query: 57 AMLSELLTNWSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLP 116
+ EL +W + A LL ++ G+LP +DNFAHI GF++G FL F LP
Sbjct: 729 CLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLP 788
Query: 117 RPRYGWLDGRNLPGSAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRW 176
+G D Y+ ++ + +V L + ++ F RC W
Sbjct: 789 YISFGKFD------------LYRKRCQII-VFQVVFLGLLAGLVVLFYFYPV----RCEW 831
Query: 177 CHYMSCVPTSSWNCE 191
C +++C+P + CE
Sbjct: 832 CEFLTCIPFTDKFCE 846
>sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2
Length = 855
Score = 104 bits (259), Expect = 4e-22, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 23/195 (11%)
Query: 3 CLVFIGIR------LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLG 56
CLV I + LE+ G+ RI +IYLLSG G++ S +F+ VG +G+ FG+L
Sbjct: 669 CLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILA 728
Query: 57 AMLSELLTNWSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLP 116
+ EL +W + A LL ++ G+LP +DNFAHI GF++G FL F LP
Sbjct: 729 CLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLP 788
Query: 117 RPRYGWLDGRNLPGSAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRW 176
+G D K Q +++ V + L+AGL V + RC W
Sbjct: 789 YISFGKFDLYR-----------KRCQIIIFQVVFLGLLAGLVVLFYVY------PVRCEW 831
Query: 177 CHYMSCVPTSSWNCE 191
C +++C+P + CE
Sbjct: 832 CEFLTCIPFTDKFCE 846
>sp|B0VX73|RHDF1_CALJA Inactive rhomboid protein 1 OS=Callithrix jacchus GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 103 bits (258), Expect = 5e-22, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 97/195 (49%), Gaps = 23/195 (11%)
Query: 3 CLVFIGIR------LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLG 56
CLV I + LE+ G+ RI +IYLLSG G++ S +F+ VG +G+ FG+L
Sbjct: 669 CLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILA 728
Query: 57 AMLSELLTNWSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLP 116
+ EL +W + A LL ++ G+LP +DNFAHI GF++G FL F LP
Sbjct: 729 CLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISGLFLSFAFLP 788
Query: 117 RPRYGWLDGRNLPGSAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRW 176
+G D K Q +++ V + L+AGL V + RC W
Sbjct: 789 YISFGKFDLYR-----------KRCQIIVFQVVFLGLLAGLVVLFYVY------PVRCEW 831
Query: 177 CHYMSCVPTSSWNCE 191
C +++C+P + CE
Sbjct: 832 CEFLTCIPFTDKFCE 846
>sp|Q00M95|RHDF2_CANFA Inactive rhomboid protein 2 OS=Canis familiaris GN=RHBDF2 PE=2 SV=1
Length = 827
Score = 102 bits (253), Expect = 2e-21, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G+ RI +I++LSG G++ S +F+ VG +G+ FGLL + EL +W L
Sbjct: 655 LEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQLLE 714
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A + L I+ G+LP +DN AHI GFL+G L F LP +G D
Sbjct: 715 RPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSGLLLAFAFLPYITFGTSD------ 768
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
KY+ + L LVSL L+ AGL +LV+ N W Y++C P +S C
Sbjct: 769 ------KYR--KRALILVSL-LVFAGLFASLVIWLYVYPIN--WPWIEYLTCFPFTSRFC 817
Query: 191 E 191
E
Sbjct: 818 E 818
>sp|Q80WQ6|RHDF2_MOUSE Inactive rhomboid protein 2 OS=Mus musculus GN=Rhbdf2 PE=1 SV=1
Length = 827
Score = 100 bits (250), Expect = 4e-21, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G+ RI +I++LSG G++ S +F+ VG +G+ FGLL + EL +W L
Sbjct: 655 LEKLAGWHRISIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQLLE 714
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A L I+ G+LP +DN AHI GFL+G L F LP +G D
Sbjct: 715 RPWKAFFNLSAIVLFLFICGLLPWIDNIAHIFGFLSGMLLAFAFLPYITFGTSD------ 768
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
KY+ + L LVSL L+ AGL +LV+ N W Y++C P +S C
Sbjct: 769 ------KYR--KRALILVSL-LVFAGLFASLVLWLYIYPIN--WPWIEYLTCFPFTSRFC 817
Query: 191 E 191
E
Sbjct: 818 E 818
>sp|Q6PJF5|RHDF2_HUMAN Inactive rhomboid protein 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2
Length = 856
Score = 100 bits (248), Expect = 9e-21, Method: Composition-based stats.
Identities = 65/181 (35%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G+ RI +I++LSG G++ S +F+ VG +G+ FGLL + EL +W L
Sbjct: 684 LEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWPLLE 743
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A + L I+ G+LP +DN AHI GFL+G L F LP +G D
Sbjct: 744 RPWKAFLNLSAIVLFLFICGLLPWIDNIAHIFGFLSGLLLAFAFLPYITFGTSD------ 797
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
KY+ + L LVSL L AGL ALV+ N W +++C P +S C
Sbjct: 798 ------KYR--KRALILVSL-LAFAGLFAALVLWLYIYPIN--WPWIEHLTCFPFTSRFC 846
Query: 191 E 191
E
Sbjct: 847 E 847
>sp|A0JPA1|RHDF2_XENTR Inactive rhomboid protein 2 OS=Xenopus tropicalis GN=rhbdf2 PE=2
SV=1
Length = 826
Score = 95.5 bits (236), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 93/181 (51%), Gaps = 17/181 (9%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE+ G++RI +IY+LSG G++ S LF+ VG +G+ FGLL + EL +W +
Sbjct: 654 LEKLAGWLRISIIYILSGITGNLASALFLPYRAEVGPAGSQFGLLACLFVELFQSWQILA 713
Query: 71 NKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPRYGWLDGRNLPG 130
A + LL I+ G+LP +DN AHI GFL+G L F LP +G D
Sbjct: 714 KPWKAFLKLLGIVLFLFLFGLLPWIDNIAHIFGFLSGLLLSFSFLPYITFGTAD------ 767
Query: 131 SAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNC 190
K + + ++SL++ + GL +LV+ N W Y++C+P ++ C
Sbjct: 768 --------KFRKRAMIIISLLVFV-GLFASLVIWLYVYPIN--WAWIEYLTCLPFTNKFC 816
Query: 191 E 191
E
Sbjct: 817 E 817
>sp|C8VCL5|Y0929_EMENI Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN10929 PE=3 SV=1
Length = 503
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 40/232 (17%)
Query: 1 MLCLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFI-RNSISVGASGALFGLLGAML 59
+L + +G +E+ G+ R G++YL SG G VL + + S G SGALFG+L +
Sbjct: 271 LLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGGNYAGQGEASCGCSGALFGILALFV 330
Query: 60 SELLTNWSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRP- 118
+LL W+ N LI +++ IA++ +G+LP +DNF+H+GGF G LG ++ P
Sbjct: 331 LDLLYGWNDRQNPWVELIIMVLGIAVSFVLGLLPGLDNFSHLGGFTMGLALGLCVMRSPN 390
Query: 119 ---------RYGWL-------------------DGRNLPGSAAIKSK-----YKTHQYVL 145
R ++ G N+ G K K +
Sbjct: 391 ALRERIGLARSPYVAMSGGVAAENADPDQNKTSTGSNIGGLGKFNPKGFFAGRKPLWWAW 450
Query: 146 WLVSLVLLIA---GLTVALVMLFRGENGNDRCRWCHYMSCVPTSSWNCEGNV 194
WLV L L+A G + +V ++ + N C WC+ SC+P + W +GN+
Sbjct: 451 WLVRLGALVAVLIGFILLIVNFYKYPSSN--CSWCYRFSCLPVNGWCDQGNL 500
>sp|Q695T8|RHBL4_TOXGO Rhomboid-like protease 4 OS=Toxoplasma gondii GN=ROM4 PE=2 SV=1
Length = 641
Score = 70.5 bits (171), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 3 CLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSEL 62
C + I +E +GF+R +++ L G G++LS + SI+VG+SG+++ LLGA++
Sbjct: 364 CQIQILWIIEPDWGFLRTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYC 423
Query: 63 LTNWSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGF 112
+ W L+ ++V+I I + G+ DN+AH+GG L G GF
Sbjct: 424 VEYWKSIPRPGCILVFMIVVI-IGILTGMAGFTDNYAHMGGALGGILWGF 472
>sp|Q76NQ1|RHDF1_DROME Inactive rhomboid protein 1 OS=Drosophila melanogaster GN=rho-5 PE=2
SV=1
Length = 1429
Score = 61.2 bits (147), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELL-TNWSLY 69
LE+ G VR ++Y++SGF G++ S + + + VG S +L G++ ++++ L+ +W
Sbjct: 1123 LERLIGTVRTAIVYIMSGFAGNLTSAILVPHRPEVGPSASLSGVVASLIALLVWMHWKYL 1182
Query: 70 TNKAAALITLLVIIAINLAIGILPHVDNF-AHIGGFLTGFFLGFVLLP 116
AL LL++ ++ + IG LP+ NF + G + G L L+P
Sbjct: 1183 HKPHIALFKLLLLCSVLVGIGTLPYQLNFLGLLAGVICGCLLTMSLVP 1230
>sp|Q6IUY1|RHBL3_TOXGO Rhomboid-like protease 3 OS=Toxoplasma gondii GN=ROM3 PE=2 SV=1
Length = 263
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 1 MLCLVFI---GIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGA 57
+L LVFI +RLE+++G + V Y LS G++LS L ++SVGAS A FG++G
Sbjct: 100 VLNLVFILHISLRLEERYGTKKFLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGG 159
Query: 58 MLSELLTNWSLYTNKAAAL----ITLLVIIAINLAIGILPHVDNFAHIGGFLTG 107
M +E+ W + + + I +L ++ L+ G VD F H+GGFL G
Sbjct: 160 MAAEVSVVWCKLSEELKRIYSMDICILAVLIYFLSFG--RTVDTFGHLGGFLAG 211
>sp|P20350|RHOM_DROME Protein rhomboid OS=Drosophila melanogaster GN=rho PE=1 SV=2
Length = 355
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 5 VFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLT 64
+F GI LE G RIGVIY+ F GS+ + + VGASG ++ LL A L+ +
Sbjct: 174 LFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVDSEVFLVGASGGVYALLAAHLANITL 233
Query: 65 NWSLYTNKAAALITLLVIIAINLAIGIL------------PHVDNFAHIGGFLTGFFLGF 112
N++ + + L ++++ ++ +L + P V AH+ G L G +GF
Sbjct: 234 NYAHMKSASTQLGSVVIFVSCDLGYALYTQYFDGSAFAKGPQVSYIAHLTGALAGLTIGF 293
Query: 113 VLL 115
++L
Sbjct: 294 LVL 296
>sp|P54493|GLUP_BACSU Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP
PE=1 SV=2
Length = 507
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Query: 2 LCLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSE 61
L L +G +E+ +G R +IYL +G GS+ S +F S GASGA+FG LGA+L
Sbjct: 243 LALWSVGTAVERMYGSGRFLLIYLAAGITGSIASFVF-SPYPSAGASGAIFGCLGALLYV 301
Query: 62 LLTNWSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVL-LPR 117
L+N ++ I +++II + + ++DN HIGG + GFF L LP+
Sbjct: 302 ALSNRKMFLRTIGTNIIVIIIINLGFGFAV-SNIDNSGHIGGLIGGFFAAAALGLPK 357
>sp|Q19821|ROM1_CAEEL Rhomboid-related protein 1 OS=Caenorhabditis elegans GN=rom-1 PE=3
SV=2
Length = 356
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 7 IGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNW 66
+GI LE RIG IYLL+ GS+L NS+ VGAS ++ L+ A ++ ++ NW
Sbjct: 192 VGIPLEVAHKIWRIGPIYLLAVTSGSLLQYAIDPNSLLVGASAGVYALIFAHVANVILNW 251
Query: 67 SLYTNKAAALITLLVIIAINLAIGI--------LPHVDNFAHIGGFLTGFFLGFVLL 115
+ ++ L V I ++ I V + AHI G +TG F G+V+L
Sbjct: 252 HEMPLRWIRVLVLFVFIFLDFGGAIHRRFYTNDCDSVSHLAHIAGAVTGLFFGYVVL 308
>sp|Q695U0|RHBL1_TOXGO Rhomboid-like protease 1 OS=Toxoplasma gondii GN=ROM1 PE=2 SV=1
Length = 293
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 7 IGIRLEQQFGFVRIGVIYLLSGFGGSVLSCL-FIRNSISVGASGALFGLLGAMLSELLTN 65
+G +E+++G ++ +Y S G++LS F NS+ VGAS A FGL+G + E+
Sbjct: 135 MGFTIERRYGLLKFTGLYFASAIYGNLLSATAFFCNSLKVGASTAGFGLIGIQICEMALT 194
Query: 66 WSLYTNKAAAL------ITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFV 113
W ++ L + L+V++ L G +D H+GG L GF +G +
Sbjct: 195 WHRMRHRDRMLTNMVSFVLLMVLLMFTLNGG---SIDQMGHLGGLLCGFSIGML 245
>sp|Q6GV23|RHBL5_TOXGO Rhomboid-like protease 5 OS=Toxoplasma gondii GN=ROM5 PE=1 SV=1
Length = 841
Score = 50.4 bits (119), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYT 70
LE +GF+R ++++ G GS+LS + +++VG+SGA +GLLGA++ + W
Sbjct: 494 LEPAWGFLRTLSLWIVGGVSGSLLSAVANPCTVTVGSSGAFYGLLGALVPFSIEYWDHIA 553
Query: 71 NKAAAL--ITLLVIIAINLAIGILPHVDNFAH 100
+ A L +++LV++A + + VDN AH
Sbjct: 554 SPAWFLFCVSVLVMVAQFGNMVGVQGVDNNAH 585
>sp|Q695T9|RHBL2_TOXGO Rhomboid-like protease 2 OS=Toxoplasma gondii GN=ROM2 PE=2 SV=1
Length = 283
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 7 IGIRLEQQFGFVRIGVIYLLSGFGGSVLSC-LFIRNSISVGASGALFGLLGAMLSELLTN 65
IG+ +E+++G+ + +Y G +++S + + GAS A+F L+G L+EL
Sbjct: 136 IGLTMEEKYGWKMLLAVYFGVGVLANMISAAVLFCGQMKAGASTAVFALIGVQLAELALI 195
Query: 66 WSLYTNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRP--RYGWL 123
W ++ +A+I++ + + H+D+ HIGG + GF G L + W
Sbjct: 196 WHAIQDRNSAIISVCICLFFVFVSSFGSHMDSVGHIGGLVMGFAAGIWLNENSDIKPTWY 255
Query: 124 DGRNLPGSAAIKS 136
D L A+ +
Sbjct: 256 DRARLTSQVALAA 268
>sp|P58873|RHBL3_MOUSE Rhomboid-related protein 3 OS=Mus musculus GN=Rhbdl3 PE=2 SV=1
Length = 404
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 5 VFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLT 64
+ +G+ LE G RIG++Y+ GS+ + + VG+SG ++ L+ A L+ ++
Sbjct: 235 LLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVM 294
Query: 65 NWSLYTNKAAALITLLVIIAINLAIG-------------ILPHVDNFAHIGGFLTGFFLG 111
NWS + L + +I +++ G PH AH+GG G LG
Sbjct: 295 NWSGMKCQFKLLRMAVALICMSMEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITLG 354
Query: 112 FVLL 115
V+L
Sbjct: 355 VVVL 358
>sp|P58872|RHBL3_HUMAN Rhomboid-related protein 3 OS=Homo sapiens GN=RHBDL3 PE=2 SV=1
Length = 404
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 7 IGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNW 66
+G+ LE G RIG++Y+ GS+ + + VG+SG ++ L+ A L+ ++ NW
Sbjct: 237 VGVPLEMVHGATRIGLVYVAGVVAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNW 296
Query: 67 SLYTNKAAALITLLVIIAINLAIG-------------ILPHVDNFAHIGGFLTGFFLGFV 113
S + L + +I +++ G PH AH+GG G LG V
Sbjct: 297 SGMKCQFKLLRMAVALICMSMEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITLGVV 356
Query: 114 LL 115
+L
Sbjct: 357 VL 358
>sp|P46116|AARA_PROST Rhomboid protease AarA OS=Providencia stuartii GN=aarA PE=1 SV=1
Length = 281
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 25/141 (17%)
Query: 2 LCLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLF----IRNS-----------ISVG 46
L L IGI E+ +G ++ IY++SG G ++ S + I NS I VG
Sbjct: 89 LALFVIGIGCERAYGKFKLLAIYIISGIGAALFSAYWQYYEISNSDLWTDSTVYITIGVG 148
Query: 47 ASGALFGLLGAMLSELLT--------NWSLYTNKAAALITLLVIIAINLAIGILPHVDNF 98
ASGA+ G+ A + L+ + + + L L+ +IA+ L G+ VDN
Sbjct: 149 ASGAIMGIAAASVIYLIKVVINKPNPHPVIQRRQKYQLYNLIAMIALTLINGLQSGVDNA 208
Query: 99 AHIGGFLTGFF--LGFVLLPR 117
AHIGG + G + ++L+P
Sbjct: 209 AHIGGAIIGALISIAYILVPH 229
>sp|O75783|RHBL1_HUMAN Rhomboid-related protein 1 OS=Homo sapiens GN=RHBDL1 PE=2 SV=1
Length = 438
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 2 LCLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSE 61
L + IG+ LE G +RI ++YL GS+ + + VG SG ++ L A L+
Sbjct: 266 LLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLAN 325
Query: 62 LLTNWSLYTNKAAALITLLVIIAINLAIGIL-------------PHVDNFAHIGGFLTGF 108
++ NW+ L +L ++ ++ +G P AH+ G + G
Sbjct: 326 VVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAVVGV 385
Query: 109 FLGFVLL 115
+G +L
Sbjct: 386 SMGLTIL 392
>sp|Q8VC82|RHBL1_MOUSE Rhomboid-related protein 1 OS=Mus musculus GN=Rhbdl1 PE=2 SV=1
Length = 373
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 2 LCLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSE 61
L + IG+ LE G +RI ++YL GS+ + + VG SG ++ L A L+
Sbjct: 201 LLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLAN 260
Query: 62 LLTNWSLYTNKAAALITLLVIIAINLAIGIL-------------PHVDNFAHIGGFLTGF 108
++ NW+ L +L ++ ++ +G P AH+ G + G
Sbjct: 261 VVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAVVGV 320
Query: 109 FLGFVLL 115
+G +L
Sbjct: 321 SMGLTIL 327
>sp|O88779|RHBL1_RAT Rhomboid-related protein 1 (Fragment) OS=Rattus norvegicus
GN=Rhbdl1 PE=2 SV=1
Length = 164
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 5 VFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLT 64
+ IG+ LE G +RI ++YL GS+ + + VG SG ++ L A L+ ++
Sbjct: 17 LMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVM 76
Query: 65 NWSLYTNKAAALITLLVIIAINLAIGIL-------------PHVDNFAHIGGFLTGFFLG 111
NW+ L +L ++ ++ +G P AH+ G + G +G
Sbjct: 77 NWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAVVGVSMG 136
Query: 112 FVLL 115
+L
Sbjct: 137 LTIL 140
>sp|A2AGA4|RHBL2_MOUSE Rhomboid-related protein 2 OS=Mus musculus GN=Rhbdl2 PE=1 SV=1
Length = 302
Score = 39.7 bits (91), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 1 MLCLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLS 60
+L + +GI LE +R+G++YL GS+ S +F VGASG ++ L+G
Sbjct: 139 LLMQIVLGIPLEMVHKGLRVGLVYLAGVLAGSLASSIFDPLKSLVGASGGVYALMGGYFM 198
Query: 61 ELLTNWSLYTNKAAALITLLVIIAI 85
++ N+ A ++ LLVII I
Sbjct: 199 NVIVNFREMI-PAFGIVRLLVIILI 222
>sp|P34356|ROM2_CAEEL Rhomboid-related protein 2 OS=Caenorhabditis elegans GN=rom-2 PE=3
SV=2
Length = 435
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 8/105 (7%)
Query: 19 RIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLSELLTNWSLYTNKAAALIT 78
RI ++Y + GS+LS G + F L+ + ++ + TN+ N L
Sbjct: 206 RIYILYFMGVLFGSILSLALDPTVFLCGGAAGSFSLIASHITTIATNFKEMENATCRLPI 265
Query: 79 LLVIIAINLAIGIL-----PHVDN---FAHIGGFLTGFFLGFVLL 115
L+V A++ + + P +D + H+GG + G F+L
Sbjct: 266 LIVFAALDYVLAVYQRFFAPRIDKVSMYGHLGGLVAGILFTFILF 310
>sp|P96617|YDCA_BACSU Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168)
GN=ydcA PE=3 SV=1
Length = 199
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 11 LEQQFGFVRIGVIYLLSGFGGSVLSCLFIR-NSISVGASGALFGLLGAMLSELLTNWSLY 69
LE+ G R ++Y SG G++ + + + + VGASGA+FGL G L +L L
Sbjct: 88 LERMLGKARFLLVYAGSGIIGNIGTYVTEPLDYVHVGASGAIFGLFGVYLFMVLFRNELI 147
Query: 70 TNKAAALITLLVIIAINLAIGILPHVDNFAHIGGFLTGFFLGFVLLPRPR 119
+ + +I L+ A+ ++ I +++ AH+ G GF L F+ + +
Sbjct: 148 GQEHSKMIITLLAFAVLMSF-INSNINMMAHLFGLCGGFLLSFLCVQKKE 196
>sp|Q9NX52|RHBL2_HUMAN Rhomboid-related protein 2 OS=Homo sapiens GN=RHBDL2 PE=1 SV=2
Length = 303
Score = 37.0 bits (84), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 2 LCLVFI-GIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNSISVGASGALFGLLGAMLS 60
LC+ + GI LE +R+G++YL GS+ S +F VGASG ++ L+G
Sbjct: 140 LCMQLVLGIPLEMVHKGLRVGLVYLAGVIAGSLASSIFDPLRYLVGASGGVYALMGGYFM 199
Query: 61 ELLTNWS 67
+L N+
Sbjct: 200 NVLVNFQ 206
>sp|Q9BYE2|TMPSD_HUMAN Transmembrane protease serine 13 OS=Homo sapiens GN=TMPRSS13 PE=2
SV=3
Length = 581
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 126 RNLPGSAAIKSKYKTHQYVLWLVSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMSCVPT 185
R PG++ K ++ Q L L+ VLL+ L V+L++LF+ G+ R+ P
Sbjct: 142 RESPGTSLPKFTWREGQKQLPLIGCVLLLIALVVSLIILFQFWQGHTGIRYKEQRESCPK 201
Query: 186 SSWNCEGNV 194
+ C+G V
Sbjct: 202 HAVRCDGVV 210
>sp|Q4L6D0|CTPAL_STAHJ Probable CtpA-like serine protease OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH1486 PE=3 SV=2
Length = 496
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 108 FFLGFVLLPRPRYGWLDGRNLPGSAAIKS-KYKTHQYVLWLVSLVLLIAGLTVALVM 163
FF+ P + LD + S++ K K+KT Q++L L+ +V++ AG+TVA +
Sbjct: 5 FFMSHN--PEEKQSNLDSNHKNESSSNKRIKFKTWQFILLLLGVVIITAGITVAATI 59
>sp|Q1RI44|COX2_RICBR Probable cytochrome c oxidase subunit 2 OS=Rickettsia bellii
(strain RML369-C) GN=ctaC PE=3 SV=1
Length = 269
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 112 FVLLPRPRYGWLDGRNLPGSAAIKSKYKTHQYVLWL-VSLVLLIAGLTVALVMLFRGENG 170
F P P W G P S ++ +K H ++L++ ++VL +AGL V + + F N
Sbjct: 21 FASEPLP---WQMGFQPPASPIMEELHKFHDFLLYISTAIVLFVAGLLVFVCIKFNARNN 77
Query: 171 NDRCRWCH 178
++ H
Sbjct: 78 PVPAKFSH 85
>sp|Q9NY99|SNTG2_HUMAN Gamma-2-syntrophin OS=Homo sapiens GN=SNTG2 PE=1 SV=2
Length = 539
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 116 PRPRYGWLDGRNLPGSAAIKSKYKT-HQYVLWLVSLVLLIAGLTVALVMLFRGENGND 172
PR WLD ++P S A S+YK + + W VL + G++ ++ + ++G D
Sbjct: 210 PRYEKRWLDTLSVPLSMARISRYKAGTEKLRWNAFEVLALDGVSSGILRFYTAQDGTD 267
>sp|P53259|PCP1_YEAST Rhomboid protein 1, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCP1 PE=1 SV=1
Length = 346
Score = 31.2 bits (69), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 13/126 (10%)
Query: 1 MLCLVFIGIRLEQQFGFVRIGVIYLLSGFGGSVLSCLFIRNS------ISVGASGALFGL 54
ML L G L G +Y+ S GS+ S + + + S+GASGALFG+
Sbjct: 203 MLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWYPKLARLAIVGPSLGASGALFGV 262
Query: 55 LGAMLSELLTNWSL----YTNKAAALITLLVIIAINLAIGILP--HVDNFAHIGGFLTGF 108
LG S L + + + A + L +A N A L D AH+GG + G
Sbjct: 263 LGC-FSYLFPHAKILLFVFPVPGGAWVAFLASVAWNAAGCALRWGSFDYAAHLGGSMMGV 321
Query: 109 FLGFVL 114
G+ +
Sbjct: 322 LYGWYI 327
>sp|P44233|VPL_HAEIN Mu-like prophage FluMu tail sheath protein OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1511 PE=3 SV=1
Length = 487
Score = 30.8 bits (68), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 148 VSLVLLIAGLTVALVMLFRGENGNDRCRWCHYMS 181
V +V +AG T+ L F+GE GN+ C+Y S
Sbjct: 155 VPVVATVAGNTITLTCRFKGETGNEIDLRCNYYS 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.146 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,023,386
Number of Sequences: 539616
Number of extensions: 2807800
Number of successful extensions: 8672
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 8607
Number of HSP's gapped (non-prelim): 56
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)