Query 029386
Match_columns 194
No_of_seqs 160 out of 611
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 19:50:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029386.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029386hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rlk_A Hypothetical protein TA 100.0 2E-47 6.9E-52 296.8 14.1 117 78-194 1-117 (117)
2 1wn2_A Peptidyl-tRNA hydrolase 100.0 4.2E-47 1.4E-51 296.8 13.9 117 78-194 5-121 (121)
3 1q7s_A BIT1, protein CGI-147; 100.0 3.2E-47 1.1E-51 295.7 12.2 117 78-194 1-117 (117)
4 2zv3_A PTH, peptidyl-tRNA hydr 100.0 4.7E-47 1.6E-51 294.0 13.0 115 80-194 1-115 (115)
5 1rzw_A Protein AF2095(GR4); be 100.0 3.4E-47 1.2E-51 298.8 11.8 114 78-194 1-114 (123)
6 1xty_A PTH, peptidyl-tRNA hydr 100.0 1.4E-46 4.8E-51 293.2 13.7 116 79-194 1-120 (120)
7 2gax_A Hypothetical protein AT 99.9 9.8E-25 3.3E-29 173.1 2.8 113 79-194 3-134 (135)
8 1scf_A Stem cell factor; steel 63.7 1.5 5E-05 38.0 0.0 36 6-46 194-236 (273)
9 2l82_A Designed protein OR32; 58.9 30 0.001 26.8 6.7 43 119-161 68-112 (162)
10 1v95_A Nuclear receptor coacti 52.7 10 0.00035 29.3 3.1 57 120-178 28-84 (130)
11 1mli_A Muconolactone isomerase 50.4 16 0.00056 26.9 3.8 86 82-182 1-90 (96)
12 3or5_A Thiol:disulfide interch 44.3 50 0.0017 23.5 5.7 31 151-187 115-145 (165)
13 1uxy_A MURB, uridine diphospho 44.1 18 0.00061 31.6 3.7 39 123-162 9-47 (340)
14 3raz_A Thioredoxin-related pro 39.3 20 0.00067 25.7 2.8 33 126-161 56-88 (151)
15 3tx1_A UDP-N-acetylenolpyruvoy 37.3 26 0.00088 30.4 3.6 41 123-164 49-89 (322)
16 3lwa_A Secreted thiol-disulfid 34.3 1.1E+02 0.0038 22.4 6.4 41 119-162 84-132 (183)
17 1twu_A Hypothetical protein YY 33.6 73 0.0025 22.2 5.1 29 127-155 77-105 (139)
18 3v7q_A Probable ribosomal prot 32.4 1.3E+02 0.0045 21.2 6.6 42 118-159 25-68 (101)
19 1ogd_A High affinity ribose tr 30.1 37 0.0013 26.0 3.1 37 154-191 22-62 (131)
20 1hsk_A UDP-N-acetylenolpyruvoy 29.1 39 0.0013 29.0 3.4 40 123-163 43-82 (326)
21 3e5d_A Putative glyoxalase I; 28.6 1.3E+02 0.0045 20.0 7.6 32 126-157 70-101 (127)
22 3i99_A UDP-N-acetylenolpyruvoy 27.4 16 0.00055 32.3 0.6 41 122-163 24-64 (357)
23 1w41_A 50S ribosomal protein L 27.4 1.4E+02 0.0049 20.9 5.7 41 118-158 22-64 (101)
24 3r8n_B 30S ribosomal protein S 26.4 48 0.0016 27.4 3.3 54 128-187 149-202 (218)
25 2kjz_A ATC0852; protein of unk 26.3 85 0.0029 22.5 4.4 30 126-155 85-114 (144)
26 2ki0_A DS119; beta-alpha-beta, 25.9 28 0.00095 21.0 1.3 23 136-158 12-34 (36)
27 3rja_A Carbohydrate oxidase; p 25.6 95 0.0032 27.9 5.4 38 126-164 34-71 (473)
28 4bby_A Alkyldihydroxyacetoneph 25.6 77 0.0026 29.8 5.0 45 117-162 192-238 (658)
29 2rbb_A Glyoxalase/bleomycin re 25.5 74 0.0025 22.2 3.9 25 130-154 78-102 (141)
30 1xqa_A Glyoxalase/bleomycin re 25.4 1E+02 0.0035 20.4 4.4 29 126-154 59-87 (113)
31 3cpq_A 50S ribosomal protein L 25.3 1.9E+02 0.0064 20.7 6.1 41 118-158 27-69 (110)
32 2obb_A Hypothetical protein; s 25.2 83 0.0028 23.9 4.3 43 118-160 31-73 (142)
33 1uta_A FTSN, MSGA, cell divisi 24.9 69 0.0023 21.5 3.4 45 136-188 18-63 (81)
34 2a4x_A Mitomycin-binding prote 24.3 1E+02 0.0036 21.3 4.5 30 127-156 71-100 (138)
35 3rhe_A NAD-dependent benzaldeh 22.2 1.1E+02 0.0038 22.1 4.4 29 127-155 67-95 (148)
36 3gl3_A Putative thiol:disulfid 22.0 1.9E+02 0.0064 20.1 5.5 17 120-136 54-70 (152)
37 3j20_B 30S ribosomal protein S 21.9 1.3E+02 0.0045 24.5 5.1 53 128-186 111-163 (202)
38 3on1_A BH2414 protein; structu 21.8 2.1E+02 0.0072 20.0 6.1 42 118-159 24-67 (101)
39 1vi6_A 30S ribosomal protein S 21.1 1.2E+02 0.0042 24.8 4.8 53 128-186 115-167 (208)
40 3lto_A Mevalonate diphosphate 20.0 1.2E+02 0.004 26.3 4.7 43 128-178 250-293 (323)
41 3bzy_B ESCU; auto cleavage pro 20.0 1.4E+02 0.0046 21.0 4.2 30 126-156 15-44 (83)
No 1
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=100.00 E-value=2e-47 Score=296.78 Aligned_cols=117 Identities=38% Similarity=0.596 Sum_probs=114.3
Q ss_pred CCeeEEEEEeCCCCCChhhHHHHhhHHHHHHHHHHhhhCHHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEE
Q 029386 78 QDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFV 157 (194)
Q Consensus 78 ~~~kmVlVVR~DL~Ms~GKiAAQ~aHAAv~a~~~~~~~~~~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~ 157 (194)
+++|||||||+||+||+||+||||||||+++|.++++++++.+++|+.+||+||||+++|+++|.+|.++|++.|||+++
T Consensus 1 ~e~k~vivvr~dL~m~~GKiaAQ~~HAa~~~~~~~~~~~~~~~~~W~~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~ 80 (117)
T 1rlk_A 1 MVKKMVIAVRKDLDMGKGKIAAQVAHAAVTCAIRSMKINRDVFNEWYDEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEI 80 (117)
T ss_dssp -CEEEEEEEESTTCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEE
T ss_pred CCcEEEEEEECCCCcCHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEE
Confidence 47999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred EEcCCCCcccCCCeeEEEecCCCccchhhhcCCCCCC
Q 029386 158 VADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 194 (194)
Q Consensus 158 V~DAGrTev~pgs~TvlAIGP~p~~~Id~iTg~LKLl 194 (194)
|+|||||||+|||.|||||||+|++.||+||||||||
T Consensus 81 v~DAG~Tei~~gt~TvlaigP~~~~~vd~itg~lkL~ 117 (117)
T 1rlk_A 81 VQDRGYTQVEPGTITCIGLGPDEEEKLDKITGKYKLL 117 (117)
T ss_dssp EECCCSSSSSCCCEEEEEEEEEEHHHHHHHHTTSCBC
T ss_pred EEeCCccCcCCCCEEEEEeCcCCHHHHHHHcCCCCCC
Confidence 9999999999999999999999999999999999997
No 2
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=100.00 E-value=4.2e-47 Score=296.84 Aligned_cols=117 Identities=41% Similarity=0.644 Sum_probs=114.6
Q ss_pred CCeeEEEEEeCCCCCChhhHHHHhhHHHHHHHHHHhhhCHHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEE
Q 029386 78 QDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFV 157 (194)
Q Consensus 78 ~~~kmVlVVR~DL~Ms~GKiAAQ~aHAAv~a~~~~~~~~~~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~ 157 (194)
.++|||||||+||+||+||+||||||||+++|+++.+++++.+++|+.+||+||||+++|+++|.+|.++|++.|||+++
T Consensus 5 ~~~k~vivvr~dL~m~~GKiaAQ~~HAa~~~~~~~~~~~~~~~~~W~~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~ 84 (121)
T 1wn2_A 5 FKYKQVIVARADLKLSKGKLAAQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKVESEEELFKLKAEAEKLGLPNAL 84 (121)
T ss_dssp CCEEEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred ccceEEEEEECCCCcCHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEE
Confidence 57899999999999999999999999999999998888899999999999999999999999999999999999999999
Q ss_pred EEcCCCCcccCCCeeEEEecCCCccchhhhcCCCCCC
Q 029386 158 VADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 194 (194)
Q Consensus 158 V~DAGrTev~pgs~TvlAIGP~p~~~Id~iTg~LKLl 194 (194)
|+|||||||+|||.|||||||+|++.||+||||||||
T Consensus 85 i~DAG~Tei~~gt~TvlaigP~~~~~vd~itg~LkL~ 121 (121)
T 1wn2_A 85 IRDAGLTEIPPGTVTVLAVGPAPEEIVDKVTGNLKLL 121 (121)
T ss_dssp EECTTCTTSCTTCEEEEEEEEEEHHHHHHHHTTSEEC
T ss_pred EEcCCccccCCCCEEEEEeccCCHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999999997
No 3
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=100.00 E-value=3.2e-47 Score=295.68 Aligned_cols=117 Identities=47% Similarity=0.858 Sum_probs=114.6
Q ss_pred CCeeEEEEEeCCCCCChhhHHHHhhHHHHHHHHHHhhhCHHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEE
Q 029386 78 QDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFV 157 (194)
Q Consensus 78 ~~~kmVlVVR~DL~Ms~GKiAAQ~aHAAv~a~~~~~~~~~~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~ 157 (194)
+++|||||||+||+||+||+||||||||+++|+++.+++++.+++|+..||+||||+++|+++|++|.++|++.|||+++
T Consensus 1 ~~~K~vivvr~dL~m~~GKiaAQ~~HAa~~~~~~~~~~~~~~~~~W~~~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~ 80 (117)
T 1q7s_A 1 GEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSL 80 (117)
T ss_dssp CCEEEEEEEEGGGCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEEEEECCCCcCHhHHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEE
Confidence 47999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred EEcCCCCcccCCCeeEEEecCCCccchhhhcCCCCCC
Q 029386 158 VADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 194 (194)
Q Consensus 158 V~DAGrTev~pgs~TvlAIGP~p~~~Id~iTg~LKLl 194 (194)
|+|||||||+|||.|||||||+|++.||+||||||||
T Consensus 81 i~DAG~Tqi~~gt~TvlaigP~~~~~vd~itg~lkL~ 117 (117)
T 1q7s_A 81 IQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKLY 117 (117)
T ss_dssp EEECSSSSEEEEEEEEEEEEEEEHHHHHHHHTTSCBC
T ss_pred EEECCCcccCCCCeEEEEeccCCHHHHHHhcCCCCCC
Confidence 9999999999999999999999999999999999997
No 4
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=4.7e-47 Score=293.97 Aligned_cols=115 Identities=34% Similarity=0.642 Sum_probs=106.0
Q ss_pred eeEEEEEeCCCCCChhhHHHHhhHHHHHHHHHHhhhCHHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEE
Q 029386 80 LKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVA 159 (194)
Q Consensus 80 ~kmVlVVR~DL~Ms~GKiAAQ~aHAAv~a~~~~~~~~~~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~ 159 (194)
+|||||||+||+||+||+||||||||+++|.++.+++++.+++|+.+||+||||+++|+++|++|.++|++.|||+++|+
T Consensus 1 ~k~vivvr~dL~m~~GKiaAQ~~HAa~~~~~~~~~~~~~~~~~W~~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~ 80 (115)
T 2zv3_A 1 MKMVVVIRNDLGMGKGKMVAQGGHAIIEAFLDAKRKNPRAVDEWLREGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIR 80 (115)
T ss_dssp CEEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEEECCCCcCHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 69999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred cCCCCcccCCCeeEEEecCCCccchhhhcCCCCCC
Q 029386 160 DAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 194 (194)
Q Consensus 160 DAGrTev~pgs~TvlAIGP~p~~~Id~iTg~LKLl 194 (194)
||||||++|||.|||||||+|++.||+||||||||
T Consensus 81 DAG~Tei~~gt~TvlaigP~~~~~vd~itg~lkL~ 115 (115)
T 2zv3_A 81 DAGHTQLEPGTLTAVAIGPEKDEKIDKITGHLKLL 115 (115)
T ss_dssp ECC-------EEEEEEEEEECHHHHHHHHTTSCBC
T ss_pred eCCceecCCCCEEEEEeCcCCHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999997
No 5
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=100.00 E-value=3.4e-47 Score=298.78 Aligned_cols=114 Identities=44% Similarity=0.586 Sum_probs=110.6
Q ss_pred CCeeEEEEEeCCCCCChhhHHHHhhHHHHHHHHHHhhhCHHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEE
Q 029386 78 QDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFV 157 (194)
Q Consensus 78 ~~~kmVlVVR~DL~Ms~GKiAAQ~aHAAv~a~~~~~~~~~~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~ 157 (194)
.++|||||||+||+||+||+||||||||+++|+++ +++++++|+++||+||||+++|+++|++|.++|++.|||+++
T Consensus 1 ~~~k~vivVr~DL~M~~GKiaAQ~~HAa~~~~~~~---~~~~l~~W~~~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~ 77 (123)
T 1rzw_A 1 MTLKQVIVVRDDLKLSRGKLAVQVAHAAIIGYLKS---DSSLRRKWLDEGQKKVVLKVKSLEELLGIKHKAESLGLVTGL 77 (123)
T ss_dssp CCCEEEEEEECCCSSCTTHHHHHHHHHHHHHHHHH---HTTHHHHTGGGCSSEEEEECSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCcEEEEEEECCCCCCcchHHHHHHHHHHHHHHHc---CHHHHHHHHHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEE
Confidence 47999999999999999999999999999999887 467899999999999999999999999999999999999999
Q ss_pred EEcCCCCcccCCCeeEEEecCCCccchhhhcCCCCCC
Q 029386 158 VADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 194 (194)
Q Consensus 158 V~DAGrTev~pgs~TvlAIGP~p~~~Id~iTg~LKLl 194 (194)
|+|||||||+|||.|||||||+|++.||+||||||||
T Consensus 78 I~DAG~Tei~pgt~TvlaigP~p~~~vd~itg~LkL~ 114 (123)
T 1rzw_A 78 VQDAGLTEVPPGTITAVVIGPDEERKIDKVTGNLPLL 114 (123)
T ss_dssp ECCTTCCSCSTTSCEEEEEEEECHHHHHHHHTCSCCC
T ss_pred EECCCCcccCCCCEEEEEeCcCCHHHHHHhcCCCeec
Confidence 9999999999999999999999999999999999997
No 6
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=100.00 E-value=1.4e-46 Score=293.17 Aligned_cols=116 Identities=44% Similarity=0.730 Sum_probs=112.5
Q ss_pred CeeEEEEEeCCCCCChhhHHHHhhHHHHHHHHHHhhhC----HHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCC
Q 029386 79 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLP 154 (194)
Q Consensus 79 ~~kmVlVVR~DL~Ms~GKiAAQ~aHAAv~a~~~~~~~~----~~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp 154 (194)
++|||||||+||+|++||+||||||||+++|+++.+++ ++.+++|+.+||+||||+++|+++|++|.++|++.|||
T Consensus 1 ~~k~vivvr~dL~m~~GKiaAQ~~HAa~~~~~~~~~~~~~~~~~~~~~W~~~g~~KiVlk~~~e~el~~l~~~a~~~gl~ 80 (120)
T 1xty_A 1 MIKMVIVVRSDIKMGKGKIAAQVAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNSLDEIISRAKKAETMNLP 80 (120)
T ss_dssp CEEEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHTTCC
T ss_pred CcEEEEEEECCCCcCHhHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHCCCcEEEEecCCHHHHHHHHHHHHHCCCC
Confidence 48999999999999999999999999999999987666 88999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCcccCCCeeEEEecCCCccchhhhcCCCCCC
Q 029386 155 TFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 194 (194)
Q Consensus 155 ~~~V~DAGrTev~pgs~TvlAIGP~p~~~Id~iTg~LKLl 194 (194)
+++|+|||||||+|||.|||||||+|++.||+||||||||
T Consensus 81 ~~~i~DAG~Tei~~gs~TvlaigP~~~~~vd~itg~LkL~ 120 (120)
T 1xty_A 81 FSIIEDAGKTQLEPGTITCLGIGPAPENLVDSITGDLKLL 120 (120)
T ss_dssp EEEEECCSSSSSCTTCEEEEEEEEEEHHHHHHHHTTCEEC
T ss_pred EEEEEcCCccccCCCCeEEEEeccCCHHHHHHHhCCCCCC
Confidence 9999999999999999999999999999999999999997
No 7
>2gax_A Hypothetical protein ATU0240; MCSG, structural genomics, agrobacterium tumfaciens, hypothe protein, PSI; 1.80A {Agrobacterium tumefaciens str} SCOP: c.131.1.1
Probab=99.89 E-value=9.8e-25 Score=173.08 Aligned_cols=113 Identities=19% Similarity=0.228 Sum_probs=105.0
Q ss_pred CeeEEEEEeCCCCCChhhHHHHhhHHHHHHHHHHh------hhCHHHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCC
Q 029386 79 DLKLALVVRQDLKMGSGKIASQCAHAATGMYAELM------QSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTG 152 (194)
Q Consensus 79 ~~kmVlVVR~DL~Ms~GKiAAQ~aHAAv~a~~~~~------~~~~~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~g 152 (194)
+.|+|||||.||+|+ ++++||||++++++.+.. ..+.+....|...+++++||++++ ++|.+|.++|.+.+
T Consensus 3 ~~K~viVv~~dL~~g--~~aN~aA~l~~gl~~~~~~~~G~~~~d~~g~~~~~~~~~p~~VL~a~~-~~L~~l~~~a~~~~ 79 (135)
T 2gax_A 3 DTKIAVILRDDLAVW--QKLNVTAFLMSGIVAQTGEIIGEPYRDGAGNVYNPLSIQPIVVMATDQ-EALRKIHQRSLERD 79 (135)
T ss_dssp SEEEEEEEETTSCHH--HHHHHHHHHHHHHHHHCGGGBCSCEECTTSCEECCCBSSCEEEEEECH-HHHHHHHHHHHHTT
T ss_pred CcEEEEEEcCCChHH--HHHHHHHHHHHHHHHhChhhcCCcccCcccccccccCCCcEEEEEECH-HHHHHHHHHHHHCC
Confidence 679999999999987 999999999999998764 245666778999999999999998 99999999999999
Q ss_pred CCeEEEEcCCC------------CcccCCCeeEEEec-CCCccchhhhcCCCCCC
Q 029386 153 LPTFVVADAGR------------TQVSAGSKTVLAIG-PGPKSLVDSVTGKQRLL 194 (194)
Q Consensus 153 lp~~~V~DAGr------------Tev~pgs~TvlAIG-P~p~~~Id~iTg~LKLl 194 (194)
|+++.+.|+++ ||+++++.|++||| |+|++.||++||+|+|+
T Consensus 80 l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~l~~~GI~l~Gp~k~VdklTg~L~L~ 134 (135)
T 2gax_A 80 ITTSLYIEEMFATGHDAANRQVFSHFSPDTAKVVGMALRADRKIVDKITKGAKLH 134 (135)
T ss_dssp CCCEEEEGGGGGCCCHHHHHHHHTTCCTTTCCEEEEEEEEEHHHHHHHTTTCEEC
T ss_pred CcEEeccHHhhhCCCHHHHHHHHhcCCcccceEEEEEEECCHHHHHHHhCCCCCC
Confidence 99999999999 99999999999999 99999999999999985
No 8
>1scf_A Stem cell factor; steel factor, KIT ligand, MAST cell growth factor, hormone/growth factor complex; HET: 1PE; 2.20A {Homo sapiens} SCOP: a.26.1.2 PDB: 1exz_A 2e9w_C* 2o27_A 2o26_A
Probab=63.69 E-value=1.5 Score=37.99 Aligned_cols=36 Identities=39% Similarity=0.621 Sum_probs=0.0
Q ss_pred CCCchhhhhhhhhcc-------cceeeeccCCCccchhhHHHHhhhhh
Q 029386 6 QNSSQLSNKQQKQEK-------VSLAVSFRPENFIPGLVIGFIFGMLL 46 (194)
Q Consensus 6 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~g~~~g~~~ 46 (194)
||.+..++ ||..+ +|.+..+ |+ +--|||||++|.+|
T Consensus 194 rn~ss~sn--~~a~~~~~~~slq~~~~~l-~a--l~slvigf~~ga~~ 236 (273)
T 1scf_A 194 RNDSSSSN--RKAKNPPGDSSLHWAAMAL-PA--LFSLIIGFAFGALY 236 (273)
T ss_dssp ------------------------------------------------
T ss_pred cCcccccc--ccccCCCCCcchhhHHHHH-HH--HHHHHHHHHHHHHh
Confidence 77777777 55444 6777655 33 33689999999887
No 9
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=58.89 E-value=30 Score=26.76 Aligned_cols=43 Identities=28% Similarity=0.481 Sum_probs=33.1
Q ss_pred HHHHHHhCCCCeEEE--ecCCHHHHHHHHHHHHHCCCCeEEEEcC
Q 029386 119 LLRKWEQCGQPKIVV--TCKNQQEMNKLWEVAENTGLPTFVVADA 161 (194)
Q Consensus 119 ~l~~W~~~G~~KIVL--k~~~e~eL~~L~~~A~~~glp~~~V~DA 161 (194)
..+.|++..|--+|+ ..+|.+.+.+..+.|+++|+..++|+..
T Consensus 68 ireiwerypqldvvvivttddkewikdfieeakergvevfvvynn 112 (162)
T 2l82_A 68 IREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNN 112 (162)
T ss_dssp HHHHHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecC
Confidence 346898876655543 4577777788999999999999999864
No 10
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=52.67 E-value=10 Score=29.29 Aligned_cols=57 Identities=18% Similarity=0.075 Sum_probs=42.9
Q ss_pred HHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCCCcccCCCeeEEEecC
Q 029386 120 LRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGP 178 (194)
Q Consensus 120 l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGrTev~pgs~TvlAIGP 178 (194)
.......|.+.-+..-++.+.|..-...|+..++|+.+|+ |-.|++.||+||--.+-
T Consensus 28 ~~~L~~~GiRvevD~~r~~e~Lg~kIR~a~~~kvPy~lVV--G~kE~e~~sVsVR~r~~ 84 (130)
T 1v95_A 28 GRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVI--TQQHQIHRSCTVNIMFG 84 (130)
T ss_dssp HHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTCSEEEEE--CHHHHHHTEEEEEECSS
T ss_pred HHHHHHCCCEEEEecCCCCCcHHHHHHHHHHcCCCEEEEE--echHHhcCeeEEEecCC
Confidence 3444566887766443323778888888999999999998 67799999999986654
No 11
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=50.35 E-value=16 Score=26.91 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=49.0
Q ss_pred EEEEEeCCCCCChhhHHHHhhH--HHHHHHHHHhhhCHHHHHHHHhCCCCe--EEEecCCHHHHHHHHHHHHHCCCCeEE
Q 029386 82 LALVVRQDLKMGSGKIASQCAH--AATGMYAELMQSDRHLLRKWEQCGQPK--IVVTCKNQQEMNKLWEVAENTGLPTFV 157 (194)
Q Consensus 82 mVlVVR~DL~Ms~GKiAAQ~aH--AAv~a~~~~~~~~~~~l~~W~~~G~~K--IVLk~~~e~eL~~L~~~A~~~glp~~~ 157 (194)
|-+.|+.|++.+.+--+.+..- |.-.+|..-.++.-.+..-|+-.|+.. -+..++|.+||.+|.. ++|-+-
T Consensus 1 MlFlV~m~V~~P~~~~~~~~~~~~a~Eka~a~eLq~~G~~~~lWRv~G~y~nisIfdv~s~~eLh~iL~-----~LPLfp 75 (96)
T 1mli_A 1 MLFHVKMTVKLPVDMDPAKATQLKADEKELAQRLQREGTWRHLWRIAGHYANYSVFDVPSVEALHDTLM-----QLPLFP 75 (96)
T ss_pred CeEEEEEEeeCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeEEEEEecCCccEEEEEEcCCHHHHHHHHH-----hCCCCc
Confidence 4466777776654443333221 111222222222333455687777644 3668999999998887 788887
Q ss_pred EEcCCCCcccCCCeeEEEecCCCcc
Q 029386 158 VADAGRTQVSAGSKTVLAIGPGPKS 182 (194)
Q Consensus 158 V~DAGrTev~pgs~TvlAIGP~p~~ 182 (194)
+.+ +.|-++.+-|++
T Consensus 76 ym~----------i~VtpL~~HPs~ 90 (96)
T 1mli_A 76 YMD----------IEVDGLCRHPSS 90 (96)
T ss_pred eEE----------EEEEEcccCCCC
Confidence 774 455555555544
No 12
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=44.33 E-value=50 Score=23.52 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=14.8
Q ss_pred CCCCeEEEEcCCCCcccCCCeeEEEecCCCccchhhh
Q 029386 151 TGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSV 187 (194)
Q Consensus 151 ~glp~~~V~DAGrTev~pgs~TvlAIGP~p~~~Id~i 187 (194)
.++|+.++.|.. |.+.-.-.|+.+.+.+.++
T Consensus 115 ~~~P~~~lid~~------G~i~~~~~g~~~~~~l~~~ 145 (165)
T 3or5_A 115 TGIPTSFVIDAS------GNVSGVIVGPRSKADFDRI 145 (165)
T ss_dssp CSSSEEEEECTT------SBEEEEECSCCCHHHHHHH
T ss_pred CCCCeEEEECCC------CcEEEEEcCCCCHHHHHHH
Confidence 356666666532 2233333455544444443
No 13
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=44.14 E-value=18 Score=31.61 Aligned_cols=39 Identities=18% Similarity=0.445 Sum_probs=32.4
Q ss_pred HHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCC
Q 029386 123 WEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAG 162 (194)
Q Consensus 123 W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAG 162 (194)
|.-.|.+..++.+.|++|+.++.+.|.+.++|+.+ +-.|
T Consensus 9 ~~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~v-lGgG 47 (340)
T 1uxy_A 9 FGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLI-LGEG 47 (340)
T ss_dssp TCCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEE-ESSC
T ss_pred CCCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEE-ECCC
Confidence 45567889999999999999999999999998764 4444
No 14
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=39.25 E-value=20 Score=25.73 Aligned_cols=33 Identities=3% Similarity=-0.002 Sum_probs=16.0
Q ss_pred CCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcC
Q 029386 126 CGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADA 161 (194)
Q Consensus 126 ~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DA 161 (194)
.+..-+.+.+++.+++. +-++..++++.++.|.
T Consensus 56 ~~v~vv~v~~d~~~~~~---~~~~~~~~~~~~~~~~ 88 (151)
T 3raz_A 56 GSVDMVGIALDTSDNIG---NFLKQTPVSYPIWRYT 88 (151)
T ss_dssp TTEEEEEEESSCHHHHH---HHHHHSCCSSCEEEEC
T ss_pred CCeEEEEEECCChHHHH---HHHHHcCCCCceEecC
Confidence 34444555566555443 3334445555444443
No 15
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=37.31 E-value=26 Score=30.35 Aligned_cols=41 Identities=15% Similarity=0.235 Sum_probs=34.1
Q ss_pred HHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCCC
Q 029386 123 WEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRT 164 (194)
Q Consensus 123 W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGrT 164 (194)
|...+.+..++...+++|+.++.+.|.+.++|.. ++-.|..
T Consensus 49 ~~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~-v~GgGsn 89 (322)
T 3tx1_A 49 TKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLT-ILGNGSN 89 (322)
T ss_dssp TSCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEE-EESCCTT
T ss_pred CCcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEE-EECCccC
Confidence 5567889999999999999999999999999865 4556553
No 16
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=34.35 E-value=1.1e+02 Score=22.40 Aligned_cols=41 Identities=10% Similarity=0.247 Sum_probs=20.5
Q ss_pred HHHHHHhCCC------CeEEEecCC--HHHHHHHHHHHHHCCCCeEEEEcCC
Q 029386 119 LLRKWEQCGQ------PKIVVTCKN--QQEMNKLWEVAENTGLPTFVVADAG 162 (194)
Q Consensus 119 ~l~~W~~~G~------~KIVLk~~~--e~eL~~L~~~A~~~glp~~~V~DAG 162 (194)
..+.+...|. .-+.+.+++ .+.+. +-++..++++.++.|..
T Consensus 84 l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~---~~~~~~~~~~~~~~d~~ 132 (183)
T 3lwa_A 84 IHEELQAAGNGDTPGGTVLGINVRDYSRDIAQ---DFVTDNGLDYPSIYDPP 132 (183)
T ss_dssp HHHHHHHCC---CCSEEEEEEECSCCCHHHHH---HHHHHTTCCSCEEECTT
T ss_pred HHHHHHhcCCCccCCcEEEEEECCCCCHHHHH---HHHHHcCCCccEEECCc
Confidence 3455555555 445555554 44443 44445566655555553
No 17
>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8
Probab=33.64 E-value=73 Score=22.20 Aligned_cols=29 Identities=14% Similarity=0.162 Sum_probs=24.7
Q ss_pred CCCeEEEecCCHHHHHHHHHHHHHCCCCe
Q 029386 127 GQPKIVVTCKNQQEMNKLWEVAENTGLPT 155 (194)
Q Consensus 127 G~~KIVLk~~~e~eL~~L~~~A~~~glp~ 155 (194)
+..-+.+.|+|.+++.++.+.+++.|+..
T Consensus 77 ~~~hi~~~v~d~~~l~~~~~~l~~~G~~~ 105 (139)
T 1twu_A 77 PDSLLVFYVPNAVELAAITSKLKHMGYQE 105 (139)
T ss_dssp TTCEEEEECCCHHHHHHHHHHHHHTTCCE
T ss_pred CccEEEEEeCCcchHHHHHHHHHHcCCcC
Confidence 44578999999999999999999999764
No 18
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=32.38 E-value=1.3e+02 Score=21.20 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=32.8
Q ss_pred HHHHHHHhCCCCeEEEecCCH--HHHHHHHHHHHHCCCCeEEEE
Q 029386 118 HLLRKWEQCGQPKIVVTCKNQ--QEMNKLWEVAENTGLPTFVVA 159 (194)
Q Consensus 118 ~~l~~W~~~G~~KIVLk~~~e--~eL~~L~~~A~~~glp~~~V~ 159 (194)
+.+..+.+.|..+.|+-..|- ....++...++..++|++.+-
T Consensus 25 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~ 68 (101)
T 3v7q_A 25 DLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVE 68 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred hhhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeec
Confidence 345677788999999999875 445567778899999998873
No 19
>1ogd_A High affinity ribose transport protein RBSD; sugar transport; HET: RIP; 1.95A {Bacillus subtilis} SCOP: c.133.1.1 PDB: 1ogc_A* 1oge_A* 1ogf_A
Probab=30.09 E-value=37 Score=26.01 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=27.4
Q ss_pred CeEEEEcCCCCcccCCCe-eEEEecCCCc---cchhhhcCCC
Q 029386 154 PTFVVADAGRTQVSAGSK-TVLAIGPGPK---SLVDSVTGKQ 191 (194)
Q Consensus 154 p~~~V~DAGrTev~pgs~-TvlAIGP~p~---~~Id~iTg~L 191 (194)
...+|.|||+. +|++.. ..+|.|++-. +.++.|+..|
T Consensus 22 D~ivIaDag~P-~p~~~~~idla~~~g~P~f~~vL~aIl~~~ 62 (131)
T 1ogd_A 22 DKIVIADAGLP-VPDGVLKIDLSLKPGLPAFQDTAAVLAEEM 62 (131)
T ss_dssp CEEEEECTTCC-CCTTSEEEECCCBTTBSCHHHHHHHHHHHS
T ss_pred CeEEEecCCCC-CCCCCCEEEeccCCCCCCHHHHHHHHHHhC
Confidence 67899999994 677765 4458898877 6777776554
No 20
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=29.14 E-value=39 Score=28.95 Aligned_cols=40 Identities=15% Similarity=0.223 Sum_probs=32.3
Q ss_pred HHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCC
Q 029386 123 WEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGR 163 (194)
Q Consensus 123 W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGr 163 (194)
|...+.+..++...|++|+.++.+.|.+.++|.. ++-.|.
T Consensus 43 ~~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~-~~GgGt 82 (326)
T 1hsk_A 43 TKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVT-YLGNGS 82 (326)
T ss_dssp TSCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEE-EESSCS
T ss_pred CCcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 3346778999999999999999999999999865 455554
No 21
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=28.59 E-value=1.3e+02 Score=19.97 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=27.4
Q ss_pred CCCCeEEEecCCHHHHHHHHHHHHHCCCCeEE
Q 029386 126 CGQPKIVVTCKNQQEMNKLWEVAENTGLPTFV 157 (194)
Q Consensus 126 ~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~ 157 (194)
.|..-+.+.++|.+++.++.+++++.|+....
T Consensus 70 ~g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~ 101 (127)
T 3e5d_A 70 LGWAHIAISTGTKEAVDELTEKLRQDGFAIAG 101 (127)
T ss_dssp SSCCCEEEECSSHHHHHHHHHHHHHTTCCEEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHHHHcCCeEec
Confidence 46678999999999999999999999987543
No 22
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=27.42 E-value=16 Score=32.26 Aligned_cols=41 Identities=17% Similarity=0.292 Sum_probs=34.0
Q ss_pred HHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCC
Q 029386 122 KWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGR 163 (194)
Q Consensus 122 ~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGr 163 (194)
.|.-.|.+..++.+.|.+|+.++.+.|++.++|.. ++-.|.
T Consensus 24 t~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~-vlGgGS 64 (357)
T 3i99_A 24 TFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKL-IIGKGS 64 (357)
T ss_dssp TTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEE-EESSCT
T ss_pred cCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEE-EECCCc
Confidence 45567888999999999999999999999999966 455554
No 23
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=27.41 E-value=1.4e+02 Score=20.88 Aligned_cols=41 Identities=15% Similarity=0.323 Sum_probs=30.2
Q ss_pred HHHHHHHhCCCCeEEEecCC--HHHHHHHHHHHHHCCCCeEEE
Q 029386 118 HLLRKWEQCGQPKIVVTCKN--QQEMNKLWEVAENTGLPTFVV 158 (194)
Q Consensus 118 ~~l~~W~~~G~~KIVLk~~~--e~eL~~L~~~A~~~glp~~~V 158 (194)
..+..+.+.|+.+.|+-..| ++-...|...++..++|++.+
T Consensus 22 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~vp~~~~ 64 (101)
T 1w41_A 22 RKSIQYAKMGGAKLIIVARNARPDIKEDIEYYARLSGIPVYEF 64 (101)
T ss_dssp HHHHHHHHHTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHhcCCCEEEe
Confidence 34556767788998888876 344555778888999998876
No 24
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=26.39 E-value=48 Score=27.44 Aligned_cols=54 Identities=22% Similarity=0.457 Sum_probs=32.7
Q ss_pred CCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCCCcccCCCeeEEEecCCCccchhhh
Q 029386 128 QPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSV 187 (194)
Q Consensus 128 ~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGrTev~pgs~TvlAIGP~p~~~Id~i 187 (194)
.+.+++-++..+|-..| .+|...|||+.-++|.. .+|.-++ ++| |+..+.+..|
T Consensus 149 ~Pdllvv~Dp~~e~~ai-~Ea~~l~IP~IalvDTn---~~p~~Vd-y~I-P~Ndds~~si 202 (218)
T 3r8n_B 149 LPDALFVIDADHEHIAI-KEANNLGIPVFAIVDTN---SDPDGVD-FVI-PGNDDAIRAV 202 (218)
T ss_dssp CCCSCEEEETGGGHHHH-HHHHHHTCCCEEECCSS---SCCSSCS-EEC-CSCSSSHHHH
T ss_pred CCCeEEecCcccccHHH-HHHHHhCCCEEEEEeCc---CCCcccc-eEe-ecCCccHHHH
Confidence 44444444444444444 45778999999999954 4554443 455 7776666543
No 25
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=26.34 E-value=85 Score=22.46 Aligned_cols=30 Identities=10% Similarity=0.272 Sum_probs=25.6
Q ss_pred CCCCeEEEecCCHHHHHHHHHHHHHCCCCe
Q 029386 126 CGQPKIVVTCKNQQEMNKLWEVAENTGLPT 155 (194)
Q Consensus 126 ~G~~KIVLk~~~e~eL~~L~~~A~~~glp~ 155 (194)
.+..-+.+.|+|.+++.++.+++++.|+..
T Consensus 85 ~~~~hl~f~v~d~~dv~~~~~~l~~~G~~~ 114 (144)
T 2kjz_A 85 GGGGELAFRVENDAQVDETFAGWKASGVAM 114 (144)
T ss_dssp SSSCEEEEECSSHHHHHHHHHHHHHTTCCC
T ss_pred CCceEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 356679999999999999999999999753
No 26
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=25.89 E-value=28 Score=20.96 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=18.4
Q ss_pred CCHHHHHHHHHHHHHCCCCeEEE
Q 029386 136 KNQQEMNKLWEVAENTGLPTFVV 158 (194)
Q Consensus 136 ~~e~eL~~L~~~A~~~glp~~~V 158 (194)
...+||.+|.++|+..+|-...|
T Consensus 12 gtpeelkklkeeakkanirvtfw 34 (36)
T 2ki0_A 12 GTPEELKKLKEEAKKANIRVTFW 34 (36)
T ss_dssp CCHHHHHHHHHHHHHHCCCCCBC
T ss_pred CCHHHHHHHHHHHHhccEEEEee
Confidence 34689999999999998865544
No 27
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=25.62 E-value=95 Score=27.92 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=32.9
Q ss_pred CCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCCC
Q 029386 126 CGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRT 164 (194)
Q Consensus 126 ~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGrT 164 (194)
.+.+..|+.+.+++|+.++.+.|++.|+|.. ++-.|+.
T Consensus 34 ~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~-v~ggGh~ 71 (473)
T 3rja_A 34 PYIPTAIAQTQTTAHIQSAVQCAKKLNLKVS-AKSGGHS 71 (473)
T ss_dssp CCCCSEEEECCSHHHHHHHHHHHHHTTCCEE-EESSCCC
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHHcCCeEE-EEcCCCC
Confidence 5789999999999999999999999999855 5667764
No 28
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=25.60 E-value=77 Score=29.77 Aligned_cols=45 Identities=18% Similarity=0.154 Sum_probs=34.6
Q ss_pred HHHHHHHHh--CCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCC
Q 029386 117 RHLLRKWEQ--CGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAG 162 (194)
Q Consensus 117 ~~~l~~W~~--~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAG 162 (194)
+++++.|.. ...+-.||...|++|..++.+.|.+.++|.+ .+=+|
T Consensus 192 ~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVv-prGgG 238 (658)
T 4bby_A 192 HEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCII-PIGGG 238 (658)
T ss_dssp HHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEE-EESSC
T ss_pred HHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEE-EECCC
Confidence 455666642 4578899999999999999999999998744 44443
No 29
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=25.53 E-value=74 Score=22.24 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=22.7
Q ss_pred eEEEecCCHHHHHHHHHHHHHCCCC
Q 029386 130 KIVVTCKNQQEMNKLWEVAENTGLP 154 (194)
Q Consensus 130 KIVLk~~~e~eL~~L~~~A~~~glp 154 (194)
-+.+.|+|.+++.++.+++++.|+.
T Consensus 78 ~~~f~v~~~~dv~~~~~~l~~~G~~ 102 (141)
T 2rbb_A 78 LLNFDVDTKEAVDKLVPVAIAAGAT 102 (141)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE
T ss_pred EEEEEcCCHHHHHHHHHHHHHcCCe
Confidence 6889999999999999999999974
No 30
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=25.44 E-value=1e+02 Score=20.36 Aligned_cols=29 Identities=7% Similarity=0.123 Sum_probs=25.2
Q ss_pred CCCCeEEEecCCHHHHHHHHHHHHHCCCC
Q 029386 126 CGQPKIVVTCKNQQEMNKLWEVAENTGLP 154 (194)
Q Consensus 126 ~G~~KIVLk~~~e~eL~~L~~~A~~~glp 154 (194)
.+..-+.+.++|.+++.++.+++++.|++
T Consensus 59 ~~~~~~~~~v~~~~d~~~~~~~l~~~G~~ 87 (113)
T 1xqa_A 59 PKTFHVGFPQESEEQVDKINQRLKEDGFL 87 (113)
T ss_dssp CTTCCEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred CceeEEEEEcCCHHHHHHHHHHHHHCCCE
Confidence 35567899999999999999999999976
No 31
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=25.30 E-value=1.9e+02 Score=20.69 Aligned_cols=41 Identities=20% Similarity=0.212 Sum_probs=31.5
Q ss_pred HHHHHHHhCCCCeEEEecCCH--HHHHHHHHHHHHCCCCeEEE
Q 029386 118 HLLRKWEQCGQPKIVVTCKNQ--QEMNKLWEVAENTGLPTFVV 158 (194)
Q Consensus 118 ~~l~~W~~~G~~KIVLk~~~e--~eL~~L~~~A~~~glp~~~V 158 (194)
..+..+.+.|..+.|+-..|- +-...|...++..+||++.+
T Consensus 27 ~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~ 69 (110)
T 3cpq_A 27 KRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQH 69 (110)
T ss_dssp HHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 345677778999999988764 45556888889999998876
No 32
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=25.25 E-value=83 Score=23.94 Aligned_cols=43 Identities=14% Similarity=0.201 Sum_probs=34.0
Q ss_pred HHHHHHHhCCCCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEc
Q 029386 118 HLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVAD 160 (194)
Q Consensus 118 ~~l~~W~~~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~D 160 (194)
+.++.+...|..-++....+...+..+.+-++..|+++..|.+
T Consensus 31 ~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~~~I~~ 73 (142)
T 2obb_A 31 ETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEFYAANK 73 (142)
T ss_dssp HHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCCSEESS
T ss_pred HHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCeEEEEc
Confidence 4567788889877777777777777888888899999877765
No 33
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=24.92 E-value=69 Score=21.46 Aligned_cols=45 Identities=16% Similarity=0.213 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHHHHHCCCCeEEEEcCCCCcccCCCeeEEEecCCC-ccchhhhc
Q 029386 136 KNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGP-KSLVDSVT 188 (194)
Q Consensus 136 ~~e~eL~~L~~~A~~~glp~~~V~DAGrTev~pgs~TvlAIGP~p-~~~Id~iT 188 (194)
.+++.-+++.++++..|++..++. .++..-+-+||.. ++..+...
T Consensus 18 ~~~~~A~~l~~~L~~~G~~a~i~~--------~~~~yRV~vGpf~s~~~A~~~~ 63 (81)
T 1uta_A 18 RGAEQAETVRAQLAFEGFDSKITT--------NNGWNRVVIGPVKGKENADSTL 63 (81)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEE--------CSSSEEEEESSCBTTTHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCeEEEe--------CCcEEEEEECCcCCHHHHHHHH
Confidence 567777778888888899887652 3557888899974 45444443
No 34
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=24.32 E-value=1e+02 Score=21.33 Aligned_cols=30 Identities=10% Similarity=0.141 Sum_probs=25.5
Q ss_pred CCCeEEEecCCHHHHHHHHHHHHHCCCCeE
Q 029386 127 GQPKIVVTCKNQQEMNKLWEVAENTGLPTF 156 (194)
Q Consensus 127 G~~KIVLk~~~e~eL~~L~~~A~~~glp~~ 156 (194)
+..-+.+.|++.+++.++.+++++.|+...
T Consensus 71 ~~~~l~f~v~~~~dv~~~~~~l~~~G~~~~ 100 (138)
T 2a4x_A 71 HRFAIAFEFPDTASVDKKYAELVDAGYEGH 100 (138)
T ss_dssp CSEEEEEECSSHHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEEEeCCHHHHHHHHHHHHHCCCcee
Confidence 455689999999999999999999998643
No 35
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=22.25 E-value=1.1e+02 Score=22.05 Aligned_cols=29 Identities=3% Similarity=0.174 Sum_probs=24.7
Q ss_pred CCCeEEEecCCHHHHHHHHHHHHHCCCCe
Q 029386 127 GQPKIVVTCKNQQEMNKLWEVAENTGLPT 155 (194)
Q Consensus 127 G~~KIVLk~~~e~eL~~L~~~A~~~glp~ 155 (194)
+..-+.+.|+|.+++.++.+++++.|+..
T Consensus 67 ~~~~l~f~v~d~~dvd~~~~~l~~~G~~i 95 (148)
T 3rhe_A 67 GGMELSFQVNSNEMVDEIHRQWSDKEISI 95 (148)
T ss_dssp -CEEEEEECSCHHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEEEcCCHHHHHHHHHHHHhCCCEE
Confidence 34568999999999999999999999865
No 36
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=22.05 E-value=1.9e+02 Score=20.06 Aligned_cols=17 Identities=18% Similarity=0.227 Sum_probs=8.2
Q ss_pred HHHHHhCCCCeEEEecC
Q 029386 120 LRKWEQCGQPKIVVTCK 136 (194)
Q Consensus 120 l~~W~~~G~~KIVLk~~ 136 (194)
.+.+...|..-+.+.++
T Consensus 54 ~~~~~~~~~~~v~v~~d 70 (152)
T 3gl3_A 54 QAKYKAKGFQVVAVNLD 70 (152)
T ss_dssp HHHHGGGTEEEEEEECC
T ss_pred HHHhhcCCeEEEEEECC
Confidence 34444445444555555
No 37
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.88 E-value=1.3e+02 Score=24.53 Aligned_cols=53 Identities=17% Similarity=0.306 Sum_probs=32.0
Q ss_pred CCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCCCcccCCCeeEEEecCCCccchhh
Q 029386 128 QPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDS 186 (194)
Q Consensus 128 ~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGrTev~pgs~TvlAIGP~p~~~Id~ 186 (194)
.+.+++-++...+-..| .+|...|||+.-++|.. -+|.-++ ++| |+..+.+..
T Consensus 111 ~Pdllvv~Dp~~d~~ai-~EA~~l~IP~Ial~DTn---~~p~~Vd-~~I-P~Ndds~~S 163 (202)
T 3j20_B 111 EPDVLIVTDPRADHQAM-REAVEIGIPIVALVDTE---NLLSYVD-LAI-PTNNKGRKA 163 (202)
T ss_dssp CCSEEEESCTTTSHHHH-HHHHHHTCCEEEEECTT---CCCTTCC-EEE-ECCCSSHHH
T ss_pred CCCeEEEeCCccchHHH-HHHHHcCCCEEEEEcCC---CCccccC-EEE-eCCCCcHHH
Confidence 45555555544444444 45778999999999954 4554433 455 666554443
No 38
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=21.80 E-value=2.1e+02 Score=20.00 Aligned_cols=42 Identities=24% Similarity=0.263 Sum_probs=31.9
Q ss_pred HHHHHHHhCCCCeEEEecCCHH--HHHHHHHHHHHCCCCeEEEE
Q 029386 118 HLLRKWEQCGQPKIVVTCKNQQ--EMNKLWEVAENTGLPTFVVA 159 (194)
Q Consensus 118 ~~l~~W~~~G~~KIVLk~~~e~--eL~~L~~~A~~~glp~~~V~ 159 (194)
..+..+.+.|+.+.|+-..|-+ ....+...++..+||++.+-
T Consensus 24 ~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~ 67 (101)
T 3on1_A 24 EQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVG 67 (101)
T ss_dssp HHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred HHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeC
Confidence 3456777789999999988764 45557777889999988763
No 39
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=21.06 E-value=1.2e+02 Score=24.84 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=33.2
Q ss_pred CCeEEEecCCHHHHHHHHHHHHHCCCCeEEEEcCCCCcccCCCeeEEEecCCCccchhh
Q 029386 128 QPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDS 186 (194)
Q Consensus 128 ~~KIVLk~~~e~eL~~L~~~A~~~glp~~~V~DAGrTev~pgs~TvlAIGP~p~~~Id~ 186 (194)
.+.+++-++..++-.. ..+|...|||+.-++|. ..+|.-++ ++| |+..+.+..
T Consensus 115 ~PdlliV~Dp~~e~~a-i~EA~~l~IPvIalvDT---n~~p~~Vd-~~I-P~Ndds~~S 167 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQA-VSEATAVGIPVVALCDS---NNSSADVD-LVI-PTNNKGRRA 167 (208)
T ss_dssp CCSEEEESCTTTTHHH-HHHHHHTTCCEEEEECT---TCCCTTCS-EEE-ESCCSCHHH
T ss_pred CCCEEEEECCCcchhH-HHHHHHhCCCEEEEeCC---CCCccccC-EEE-eCCCCchhH
Confidence 4666665554444444 44578899999999994 45555444 455 666655544
No 40
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila}
Probab=20.04 E-value=1.2e+02 Score=26.27 Aligned_cols=43 Identities=19% Similarity=0.103 Sum_probs=29.1
Q ss_pred CCeEEEecCCHHHHHHHHHHHH-HCCCCeEEEEcCCCCcccCCCeeEEEecC
Q 029386 128 QPKIVVTCKNQQEMNKLWEVAE-NTGLPTFVVADAGRTQVSAGSKTVLAIGP 178 (194)
Q Consensus 128 ~~KIVLk~~~e~eL~~L~~~A~-~~glp~~~V~DAGrTev~pgs~TvlAIGP 178 (194)
++-+..-.++-.++.++..+++ +.|++.+.+.||| .||+++-|
T Consensus 250 ~P~~~~l~p~s~~i~~~v~~~r~~~G~~~~~tsgAG--------Pnv~~l~~ 293 (323)
T 3lto_A 250 EKPFSYITDNTLHILSVIEKFWNEKGDGPVVTMDAG--------PNVHLLYR 293 (323)
T ss_dssp SSCCCSCCHHHHHHHHHHHHHHHHHSCCCEEECCSS--------SCEEEEEC
T ss_pred CCCceecCchHHHHHHHHHHHHHhCCCeEEEEECCC--------CCeEEEEe
Confidence 3444444555567777666665 5789999999999 46777744
No 41
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=20.00 E-value=1.4e+02 Score=21.02 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=23.8
Q ss_pred CCCCeEEEecCCHHHHHHHHHHHHHCCCCeE
Q 029386 126 CGQPKIVVTCKNQQEMNKLWEVAENTGLPTF 156 (194)
Q Consensus 126 ~G~~KIVLk~~~e~eL~~L~~~A~~~glp~~ 156 (194)
.+-++||-|..|+- =++|.+.|+++|||..
T Consensus 15 ~~aP~VvAKG~~~~-A~~I~~~A~e~~VPi~ 44 (83)
T 3bzy_B 15 TPLPLVIETGKDAK-ALQIIKLAELYDIPVI 44 (83)
T ss_dssp CSSCEEEEEEETHH-HHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEEeCcHH-HHHHHHHHHHcCCCEE
Confidence 46789999998853 3469999999999854
Done!