Query 029390
Match_columns 194
No_of_seqs 174 out of 1246
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 12:09:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029390.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029390hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2679 Purple (tartrate-resis 100.0 1.9E-35 4.2E-40 239.3 11.4 191 2-193 8-205 (336)
2 PTZ00422 glideosome-associated 100.0 3E-30 6.5E-35 222.2 14.9 148 34-192 22-207 (394)
3 cd07378 MPP_ACP5 Homo sapiens 99.9 1.4E-25 3.1E-30 186.2 13.0 155 39-193 1-163 (277)
4 KOG1378 Purple acid phosphatas 99.8 3E-20 6.6E-25 161.2 11.4 140 28-193 137-286 (452)
5 PLN02533 probable purple acid 99.8 5.4E-20 1.2E-24 161.9 12.0 138 28-193 130-277 (427)
6 cd00839 MPP_PAPs purple acid p 99.8 1.8E-19 4E-24 150.6 11.8 139 36-193 2-148 (294)
7 cd07395 MPP_CSTP1 Homo sapiens 99.7 2.3E-17 4.9E-22 136.2 11.0 144 36-193 2-159 (262)
8 cd07396 MPP_Nbla03831 Homo sap 99.7 5.8E-17 1.3E-21 134.5 11.9 143 39-193 1-174 (267)
9 cd07402 MPP_GpdQ Enterobacter 99.7 4.2E-16 9E-21 126.6 11.4 130 40-193 1-140 (240)
10 PRK11148 cyclic 3',5'-adenosin 99.7 8.2E-16 1.8E-20 128.1 12.8 139 29-193 5-153 (275)
11 cd07401 MPP_TMEM62_N Homo sapi 99.6 5.5E-15 1.2E-19 122.1 11.9 143 41-193 2-161 (256)
12 cd08163 MPP_Cdc1 Saccharomyces 99.6 1.2E-14 2.6E-19 120.1 8.7 119 61-193 36-158 (257)
13 cd07399 MPP_YvnB Bacillus subt 99.3 1.8E-11 3.9E-16 98.5 8.7 76 39-119 1-80 (214)
14 cd07383 MPP_Dcr2 Saccharomyces 99.3 2.5E-11 5.4E-16 96.4 8.7 81 38-122 2-90 (199)
15 cd00842 MPP_ASMase acid sphing 99.3 2.4E-11 5.3E-16 102.0 9.1 146 42-193 41-208 (296)
16 KOG3662 Cell division control 99.2 1.1E-10 2.3E-15 101.1 11.2 134 26-164 31-185 (410)
17 COG1409 Icc Predicted phosphoh 99.2 2.9E-10 6.2E-15 94.0 12.2 132 39-193 1-136 (301)
18 TIGR03767 P_acnes_RR metalloph 99.1 7.7E-10 1.7E-14 97.8 11.0 41 143-193 292-334 (496)
19 KOG1432 Predicted DNA repair e 99.0 3.4E-09 7.4E-14 89.4 12.1 86 34-124 49-150 (379)
20 PRK11340 phosphodiesterase Yae 99.0 1.8E-09 4E-14 89.9 8.6 82 34-122 45-126 (271)
21 PF00149 Metallophos: Calcineu 99.0 1.5E-09 3.2E-14 80.7 6.9 78 39-123 1-80 (200)
22 TIGR03729 acc_ester putative p 98.9 6.9E-09 1.5E-13 84.7 10.0 105 40-158 1-109 (239)
23 cd07393 MPP_DR1119 Deinococcus 98.9 7.2E-09 1.6E-13 84.4 8.1 140 41-193 1-157 (232)
24 cd07392 MPP_PAE1087 Pyrobaculu 98.8 2.6E-08 5.6E-13 77.4 9.9 114 41-187 1-115 (188)
25 cd07385 MPP_YkuE_C Bacillus su 98.8 2.8E-08 6E-13 79.7 10.2 79 38-124 1-79 (223)
26 TIGR03768 RPA4764 metallophosp 98.8 3.5E-08 7.5E-13 86.9 11.0 46 144-193 294-343 (492)
27 cd00840 MPP_Mre11_N Mre11 nucl 98.7 6E-08 1.3E-12 77.4 9.0 115 40-161 1-135 (223)
28 PF09423 PhoD: PhoD-like phosp 98.7 7.6E-08 1.6E-12 85.6 9.0 160 28-193 94-312 (453)
29 cd07400 MPP_YydB Bacillus subt 98.7 9.1E-08 2E-12 71.7 7.3 74 41-120 1-80 (144)
30 PHA02546 47 endonuclease subun 98.6 1E-07 2.2E-12 81.9 8.2 81 39-122 1-90 (340)
31 TIGR00619 sbcd exonuclease Sbc 98.6 1.1E-07 2.5E-12 78.4 7.8 80 39-122 1-89 (253)
32 COG0420 SbcD DNA repair exonuc 98.6 1.1E-07 2.3E-12 83.1 7.4 81 39-123 1-90 (390)
33 cd08166 MPP_Cdc1_like_1 unchar 98.6 1.3E-07 2.9E-12 75.0 7.3 57 64-123 36-95 (195)
34 PRK10966 exonuclease subunit S 98.6 1.8E-07 3.8E-12 82.3 8.3 81 39-123 1-89 (407)
35 cd08165 MPP_MPPE1 human MPPE1 98.6 1.8E-07 3.8E-12 71.9 7.0 59 61-122 29-90 (156)
36 TIGR00583 mre11 DNA repair pro 98.5 6.7E-07 1.4E-11 78.5 8.5 46 37-83 2-55 (405)
37 PF12850 Metallophos_2: Calcin 98.4 7.2E-07 1.6E-11 67.1 7.0 91 39-161 1-91 (156)
38 cd07388 MPP_Tt1561 Thermus the 98.4 9.5E-07 2.1E-11 71.7 8.0 72 38-121 4-75 (224)
39 cd07397 MPP_DevT Myxococcus xa 98.3 1.3E-06 2.8E-11 71.5 6.9 65 39-123 1-65 (238)
40 cd08164 MPP_Ted1 Saccharomyces 98.3 2E-06 4.2E-11 68.3 7.0 63 58-123 32-113 (193)
41 cd07391 MPP_PF1019 Pyrococcus 98.3 2.7E-06 5.8E-11 66.1 7.5 63 57-123 28-90 (172)
42 cd00838 MPP_superfamily metall 98.3 1.4E-06 3.1E-11 62.5 5.6 70 42-120 1-70 (131)
43 TIGR01854 lipid_A_lpxH UDP-2,3 98.3 1.9E-06 4E-11 70.1 6.8 79 42-122 2-82 (231)
44 cd07384 MPP_Cdc1_like Saccharo 98.3 1.7E-06 3.6E-11 67.4 6.1 63 59-123 34-102 (171)
45 KOG3770 Acid sphingomyelinase 98.3 2.1E-05 4.5E-10 71.0 13.3 127 59-193 198-353 (577)
46 cd07404 MPP_MS158 Microscilla 98.3 4.4E-07 9.6E-12 69.7 2.3 68 41-121 1-68 (166)
47 PRK05340 UDP-2,3-diacylglucosa 98.2 3.6E-06 7.8E-11 68.8 7.2 78 40-122 2-84 (241)
48 cd07379 MPP_239FB Homo sapiens 98.2 3.1E-06 6.7E-11 63.0 5.9 64 40-123 1-65 (135)
49 TIGR00040 yfcE phosphoesterase 98.2 5.9E-06 1.3E-10 63.1 7.1 62 40-121 2-64 (158)
50 COG1408 Predicted phosphohydro 98.2 5.6E-06 1.2E-10 69.5 6.8 81 35-124 41-121 (284)
51 PHA02239 putative protein phos 98.1 7.1E-06 1.5E-10 67.1 6.9 71 40-121 2-73 (235)
52 PRK09453 phosphodiesterase; Pr 98.1 1.1E-05 2.4E-10 63.1 7.3 73 40-121 2-76 (182)
53 COG3540 PhoD Phosphodiesterase 98.1 2.1E-05 4.6E-10 69.3 9.5 162 27-193 128-351 (522)
54 cd00841 MPP_YfcE Escherichia c 98.1 9.1E-06 2E-10 61.6 6.2 60 40-122 1-60 (155)
55 cd07394 MPP_Vps29 Homo sapiens 98.1 3.3E-05 7.2E-10 60.5 9.2 66 40-122 1-66 (178)
56 PRK00166 apaH diadenosine tetr 98.0 1.7E-05 3.7E-10 66.4 7.2 68 40-121 2-69 (275)
57 TIGR00024 SbcD_rel_arch putati 97.9 3.3E-05 7.1E-10 62.8 7.2 76 39-121 15-102 (225)
58 PRK04036 DNA polymerase II sma 97.9 5.4E-05 1.2E-09 68.5 9.3 90 33-122 238-344 (504)
59 cd07389 MPP_PhoD Bacillus subt 97.9 5.3E-05 1.2E-09 61.0 7.7 115 67-192 26-187 (228)
60 cd07424 MPP_PrpA_PrpB PrpA and 97.9 4.6E-05 9.9E-10 60.9 6.7 66 40-121 2-67 (207)
61 PRK11439 pphA serine/threonine 97.8 4.2E-05 9.2E-10 61.7 6.3 65 40-120 18-82 (218)
62 cd07398 MPP_YbbF-LpxH Escheric 97.8 2.5E-05 5.4E-10 62.2 4.9 112 42-162 1-118 (217)
63 cd07422 MPP_ApaH Escherichia c 97.8 7.2E-05 1.6E-09 62.0 7.0 66 42-121 2-67 (257)
64 cd07386 MPP_DNA_pol_II_small_a 97.8 7.9E-05 1.7E-09 60.9 7.1 81 42-122 2-95 (243)
65 cd07425 MPP_Shelphs Shewanella 97.8 4.4E-05 9.6E-10 61.2 5.1 72 42-121 1-80 (208)
66 PF14582 Metallophos_3: Metall 97.7 6.4E-05 1.4E-09 60.8 5.5 74 38-122 5-103 (255)
67 cd07413 MPP_PA3087 Pseudomonas 97.7 9.2E-05 2E-09 60.0 5.9 69 41-121 1-76 (222)
68 PRK13625 bis(5'-nucleosyl)-tet 97.7 0.00011 2.5E-09 60.3 6.4 69 40-120 2-78 (245)
69 PRK09968 serine/threonine-spec 97.7 0.00014 2.9E-09 58.8 6.6 66 39-120 15-80 (218)
70 COG1407 Predicted ICC-like pho 97.6 0.00034 7.3E-09 57.0 8.1 82 37-123 18-112 (235)
71 cd07423 MPP_PrpE Bacillus subt 97.6 0.00015 3.2E-09 59.1 6.0 69 40-120 2-79 (234)
72 cd07390 MPP_AQ1575 Aquifex aeo 97.6 0.00027 5.8E-09 54.6 6.9 43 69-122 41-83 (168)
73 cd00144 MPP_PPP_family phospho 97.5 0.00029 6.4E-09 56.4 7.0 69 42-122 1-69 (225)
74 cd07421 MPP_Rhilphs Rhilph pho 97.5 0.00026 5.6E-09 59.7 6.9 73 40-121 3-80 (304)
75 TIGR00668 apaH bis(5'-nucleosy 97.5 0.00028 6E-09 59.1 6.7 67 40-120 2-68 (279)
76 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.3 0.001 2.2E-08 55.3 7.7 106 41-160 1-124 (262)
77 cd07403 MPP_TTHA0053 Thermus t 97.3 0.00055 1.2E-08 50.7 5.0 58 42-121 1-58 (129)
78 COG2129 Predicted phosphoester 97.1 0.0022 4.8E-08 51.8 7.1 74 38-122 3-78 (226)
79 COG2908 Uncharacterized protei 97.1 0.0008 1.7E-08 54.8 4.4 75 43-121 2-80 (237)
80 KOG2310 DNA repair exonuclease 97.0 0.0027 5.9E-08 57.1 7.6 51 36-87 11-69 (646)
81 cd00845 MPP_UshA_N_like Escher 97.0 0.0032 6.8E-08 51.4 7.5 78 39-124 1-85 (252)
82 COG0622 Predicted phosphoester 97.0 0.0032 7E-08 49.1 6.9 65 39-122 2-66 (172)
83 cd07420 MPP_RdgC Drosophila me 96.9 0.0023 5E-08 54.7 6.0 71 40-121 52-123 (321)
84 cd07406 MPP_CG11883_N Drosophi 96.7 0.015 3.1E-07 48.1 9.4 78 39-123 1-85 (257)
85 cd07408 MPP_SA0022_N Staphyloc 96.7 0.0066 1.4E-07 50.0 7.1 79 39-124 1-85 (257)
86 cd07418 MPP_PP7 PP7, metalloph 96.6 0.0049 1.1E-07 53.8 6.1 71 39-121 66-138 (377)
87 cd07382 MPP_DR1281 Deinococcus 96.6 0.01 2.2E-07 49.2 7.6 72 40-123 1-72 (255)
88 cd07380 MPP_CWF19_N Schizosacc 96.5 0.0096 2.1E-07 45.4 6.4 66 42-119 1-68 (150)
89 TIGR00282 metallophosphoestera 96.5 0.013 2.7E-07 48.9 7.5 72 40-123 2-73 (266)
90 smart00156 PP2Ac Protein phosp 96.4 0.0086 1.9E-07 50.0 6.2 71 39-121 28-99 (271)
91 PRK09558 ushA bifunctional UDP 96.4 0.023 5E-07 52.0 9.3 84 33-124 29-124 (551)
92 cd07417 MPP_PP5_C PP5, C-termi 96.3 0.0086 1.9E-07 51.1 5.6 72 39-121 60-132 (316)
93 cd07416 MPP_PP2B PP2B, metallo 96.3 0.01 2.3E-07 50.4 6.1 71 39-121 43-114 (305)
94 cd07410 MPP_CpdB_N Escherichia 96.2 0.014 3.1E-07 48.4 6.4 76 39-123 1-97 (277)
95 cd07414 MPP_PP1_PPKL PP1, PPKL 96.0 0.015 3.3E-07 49.1 5.8 71 39-121 50-121 (293)
96 COG4186 Predicted phosphoester 96.0 0.038 8.2E-07 42.4 7.2 73 40-123 5-88 (186)
97 cd07415 MPP_PP2A_PP4_PP6 PP2A, 95.9 0.015 3.3E-07 48.9 5.3 70 40-121 43-113 (285)
98 PTZ00244 serine/threonine-prot 95.8 0.017 3.7E-07 48.8 5.1 69 41-121 54-123 (294)
99 PTZ00480 serine/threonine-prot 95.7 0.021 4.6E-07 48.8 5.4 71 39-121 59-130 (320)
100 cd07411 MPP_SoxB_N Thermus the 95.7 0.025 5.4E-07 46.8 5.7 59 59-124 39-98 (264)
101 PTZ00239 serine/threonine prot 95.6 0.026 5.6E-07 48.0 5.6 70 40-121 44-114 (303)
102 PRK09419 bifunctional 2',3'-cy 95.4 0.065 1.4E-06 53.3 8.3 82 35-124 657-739 (1163)
103 cd07419 MPP_Bsu1_C Arabidopsis 95.4 0.046 9.9E-07 46.6 6.3 71 40-121 49-127 (311)
104 PRK09419 bifunctional 2',3'-cy 95.4 0.15 3.2E-06 50.9 10.6 48 35-82 38-97 (1163)
105 COG1692 Calcineurin-like phosp 95.3 0.26 5.6E-06 40.6 10.0 73 39-123 1-73 (266)
106 cd07412 MPP_YhcR_N Bacillus su 95.3 0.095 2.1E-06 44.0 7.8 81 39-124 1-91 (288)
107 COG0737 UshA 5'-nucleotidase/2 95.0 0.19 4.1E-06 45.7 9.5 88 32-124 20-118 (517)
108 cd07387 MPP_PolD2_C PolD2 (DNA 94.6 0.38 8.1E-06 40.0 9.5 125 41-165 2-157 (257)
109 COG1768 Predicted phosphohydro 94.5 0.035 7.7E-07 43.6 2.9 46 71-124 44-89 (230)
110 cd07409 MPP_CD73_N CD73 ecto-5 94.2 0.28 6.2E-06 40.9 8.2 79 39-124 1-97 (281)
111 COG1311 HYS2 Archaeal DNA poly 94.1 0.52 1.1E-05 42.3 9.7 94 33-127 220-327 (481)
112 cd07407 MPP_YHR202W_N Saccharo 94.0 0.28 6.1E-06 41.2 7.6 83 36-122 3-98 (282)
113 TIGR01530 nadN NAD pyrophospha 93.9 0.27 5.9E-06 45.1 8.0 80 39-124 1-97 (550)
114 PRK09418 bifunctional 2',3'-cy 93.7 0.39 8.6E-06 45.9 8.9 47 35-81 36-94 (780)
115 cd08162 MPP_PhoA_N Synechococc 93.3 0.28 6E-06 41.8 6.5 43 39-81 1-49 (313)
116 cd07405 MPP_UshA_N Escherichia 93.3 0.37 8.1E-06 40.4 7.2 78 39-124 1-90 (285)
117 PF13277 YmdB: YmdB-like prote 92.4 0.67 1.5E-05 38.3 7.3 70 42-123 1-70 (253)
118 PRK09420 cpdB bifunctional 2', 91.8 0.96 2.1E-05 42.4 8.5 47 36-82 23-81 (649)
119 PF04042 DNA_pol_E_B: DNA poly 91.6 0.15 3.3E-06 40.4 2.6 122 41-162 1-139 (209)
120 KOG0374 Serine/threonine speci 91.4 0.48 1.1E-05 40.8 5.7 74 38-122 58-132 (331)
121 PRK11907 bifunctional 2',3'-cy 89.5 0.92 2E-05 43.6 6.2 48 35-82 112-171 (814)
122 TIGR01390 CycNucDiestase 2',3' 89.1 0.88 1.9E-05 42.5 5.8 45 38-82 2-58 (626)
123 KOG3947 Phosphoesterases [Gene 84.9 2.1 4.6E-05 35.9 5.1 72 33-123 56-128 (305)
124 PTZ00235 DNA polymerase epsilo 84.4 6.1 0.00013 33.4 7.7 85 34-122 23-123 (291)
125 KOG0372 Serine/threonine speci 81.3 3.1 6.8E-05 34.4 4.7 70 41-122 45-115 (303)
126 KOG2863 RNA lariat debranching 79.5 12 0.00027 32.7 7.9 86 69-161 29-127 (456)
127 COG5555 Cytolysin, a secreted 79.3 2.4 5.2E-05 35.9 3.5 85 74-159 130-242 (392)
128 KOG0371 Serine/threonine prote 78.5 4.2 9.1E-05 33.9 4.6 73 38-122 59-132 (319)
129 KOG2476 Uncharacterized conser 77.0 11 0.00025 33.8 7.2 69 39-118 6-75 (528)
130 KOG4419 5' nucleotidase [Nucle 68.6 11 0.00024 34.9 5.2 84 34-123 38-136 (602)
131 PF06874 FBPase_2: Firmicute f 62.1 11 0.00023 35.2 4.0 49 61-120 175-223 (640)
132 KOG0375 Serine-threonine phosp 61.5 23 0.00049 31.1 5.6 70 40-122 89-160 (517)
133 PF15240 Pro-rich: Proline-ric 58.4 6.8 0.00015 30.7 1.8 16 1-16 1-16 (179)
134 KOG0373 Serine/threonine speci 50.0 45 0.00098 27.4 5.2 69 41-122 48-118 (306)
135 COG2047 Uncharacterized protei 48.5 42 0.00091 27.5 4.8 42 39-80 85-126 (258)
136 TIGR03413 GSH_gloB hydroxyacyl 47.0 22 0.00047 29.0 3.1 46 73-122 120-168 (248)
137 PF12273 RCR: Chitin synthesis 46.2 9.9 0.00021 27.9 0.9 15 5-19 6-20 (130)
138 PRK10241 hydroxyacylglutathion 42.5 26 0.00057 28.6 3.0 45 74-122 122-169 (251)
139 PF02350 Epimerase_2: UDP-N-ac 41.9 24 0.00053 30.3 2.8 42 62-117 59-100 (346)
140 COG3855 Fbp Uncharacterized pr 37.9 58 0.0013 29.7 4.5 49 62-121 182-230 (648)
141 PRK10773 murF UDP-N-acetylmura 34.6 61 0.0013 28.8 4.3 66 41-116 327-392 (453)
142 COG2875 CobM Precorrin-4 methy 32.8 81 0.0018 26.0 4.3 55 54-119 60-114 (254)
143 TIGR03568 NeuC_NnaA UDP-N-acet 31.8 63 0.0014 27.9 3.8 46 61-120 84-130 (365)
144 PF07265 TAP35_44: Tapetum spe 31.0 54 0.0012 23.3 2.6 25 3-27 10-34 (119)
145 COG0381 WecB UDP-N-acetylgluco 30.8 55 0.0012 28.9 3.2 22 60-81 82-103 (383)
146 PF13956 Ibs_toxin: Toxin Ibs, 30.0 32 0.0007 16.5 0.9 8 3-10 4-11 (19)
147 PF11980 DUF3481: Domain of un 29.8 60 0.0013 22.2 2.6 19 3-21 25-43 (87)
148 PF11395 DUF2873: Protein of u 28.4 50 0.0011 19.0 1.7 28 3-33 14-41 (43)
149 PF09049 SNN_transmemb: Stanni 28.3 63 0.0014 17.6 2.0 16 5-20 17-32 (33)
150 PF01470 Peptidase_C15: Pyrogl 27.6 54 0.0012 26.0 2.4 24 57-80 47-70 (202)
151 COG2237 Predicted membrane pro 27.3 1.5E+02 0.0034 25.9 5.3 45 37-81 65-109 (364)
152 KOG3818 DNA polymerase epsilon 27.2 3.9E+02 0.0085 24.3 7.8 85 34-123 278-371 (525)
153 PRK02228 V-type ATP synthase s 26.2 2.3E+02 0.005 19.7 5.7 26 56-81 30-55 (100)
154 PRK10834 vancomycin high tempe 25.8 3.8E+02 0.0082 22.0 8.5 16 66-81 77-92 (239)
155 KOG3325 Membrane coat complex 25.0 64 0.0014 24.8 2.3 39 41-81 3-41 (183)
156 PRK13193 pyrrolidone-carboxyla 25.0 83 0.0018 25.2 3.1 24 57-80 47-70 (209)
157 COG1927 Mtd Coenzyme F420-depe 24.4 2.6E+02 0.0057 22.8 5.7 47 38-87 31-77 (277)
158 PRK13195 pyrrolidone-carboxyla 23.8 89 0.0019 25.4 3.1 21 60-80 51-71 (222)
159 PRK13194 pyrrolidone-carboxyla 22.8 92 0.002 24.9 3.0 25 57-81 47-71 (208)
160 PF10686 DUF2493: Protein of u 22.5 2.3E+02 0.005 18.4 5.4 39 38-80 3-41 (71)
161 cd00886 MogA_MoaB MogA_MoaB fa 22.0 2E+02 0.0043 21.4 4.5 28 54-81 45-72 (152)
162 PF05582 Peptidase_U57: YabG p 21.9 1.1E+02 0.0023 25.9 3.2 28 55-82 139-166 (287)
163 PF07213 DAP10: DAP10 membrane 21.7 98 0.0021 21.0 2.4 18 6-23 45-62 (79)
164 PRK13196 pyrrolidone-carboxyla 21.3 1E+02 0.0023 24.6 3.0 22 58-79 49-70 (211)
165 PF13258 DUF4049: Domain of un 21.2 1.2E+02 0.0026 25.2 3.3 17 107-123 126-142 (318)
166 PF05902 4_1_CTD: 4.1 protein 20.9 1.9E+02 0.0042 21.0 4.0 34 38-75 70-103 (114)
167 TIGR02667 moaB_proteo molybden 20.6 2.1E+02 0.0046 21.7 4.5 28 54-81 47-74 (163)
No 1
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-35 Score=239.29 Aligned_cols=191 Identities=62% Similarity=1.056 Sum_probs=165.5
Q ss_pred chhHHHHHHHHHHhhhhccccCCCCCCccCCCCCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 2 SLTLIITFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
.+++|+.+.-++..+. .+++++.|+|+..|++.+.+++|+++||||..+.++|..++..|.+++++...||||.+|||+
T Consensus 8 ~~~~~~~i~t~f~I~~-~~~s~~eLp~l~~p~~~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNf 86 (336)
T KOG2679|consen 8 PFSLLFGILTIFFILS-AISSTAELPRLYDPAKSDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNF 86 (336)
T ss_pred ceeehHHHHHHHHHhh-ccchhhhhhhhcCCCCCCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcc
Confidence 3444444333333333 346789999999999999999999999999878889999999999999999999999999999
Q ss_pred ccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcc
Q 029390 82 YDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTP 161 (194)
Q Consensus 82 Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~ 161 (194)
|++|+.+.+|++|++.|+.+|+..+|+.|||.++||||++++..+|+++-++...+||.||+.|..+..-+.+.++|+.+
T Consensus 87 Yd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rsf~~~ae~ve~f~v~~~~ 166 (336)
T KOG2679|consen 87 YDTGLTSENDPRFQDSFENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRSFYVDAEIVEMFFVDTTP 166 (336)
T ss_pred cccCCCCCCChhHHhhhhhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccHHhhcceeeeeecccccc
Confidence 99999999999999999999998899999999999999999999999988889999999999887887889999999999
Q ss_pred cccccccCCCCCcccccccCcc------h-HHHHHHhhc
Q 029390 162 FVNKYFTDPEDHVYDWSGIQPR------K-SYLANLLKV 193 (194)
Q Consensus 162 ~~~~y~~~~~~~~~~~~~l~~~------Q-~WL~~dL~~ 193 (194)
+..+|+..+.+.-++|.+..++ + .||+..|++
T Consensus 167 f~~d~~~~~~~~~ydw~~v~PR~~~~~~~l~~le~~L~~ 205 (336)
T KOG2679|consen 167 FMDDTFTLCTDDVYDWRGVLPRVKYLRALLSWLEVALKA 205 (336)
T ss_pred chhhheecccccccccccCChHHHHHHHHHHHHHHHHHH
Confidence 9989998888788888876664 4 677777653
No 2
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.97 E-value=3e-30 Score=222.18 Aligned_cols=148 Identities=27% Similarity=0.532 Sum_probs=122.5
Q ss_pred CCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCC--CCCce
Q 029390 34 KPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPS--LAKQW 111 (194)
Q Consensus 34 ~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~--l~iP~ 111 (194)
..+.+++|+++||||. +.++|..||+.|.+++++.++|||+.+|||+ ++|+.+.+|++|++.|+++|.... +++||
T Consensus 22 ~~~~~l~F~~vGDwG~-g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pw 99 (394)
T PTZ00422 22 SVKAQLRFASLGNWGT-GSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPF 99 (394)
T ss_pred ccCCeEEEEEEecCCC-CchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCe
Confidence 3667899999999996 7788999999999999999999999999999 899999999999999999998766 89999
Q ss_pred EEeccCcccCCCcccccccc--------------c---ccCCCcceeee-eEEEe-----------------CCeEEEEE
Q 029390 112 YNVLGNHDYRGDVEAQLSPV--------------L---RDIDSRWLCLR-SFIVN-----------------AEIAEFIF 156 (194)
Q Consensus 112 ~~v~GNHD~~~~~~~~~~~~--------------~---~~~~~~~~~p~-~ysf~-----------------~g~v~fI~ 156 (194)
|+|+|||||+++..+|+++. | +...+||.||. ||++. ...+.||+
T Consensus 100 y~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~~yY~~~~~f~~~~~~~~~~~~~~~~~v~fif 179 (394)
T PTZ00422 100 FTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPNYWYHYFTHFTDTSGPSLLKSGHKDMSVAFIF 179 (394)
T ss_pred EEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCchhheeeeeeecccccccccccCCCCEEEEEE
Confidence 99999999999999988531 1 12368999996 67541 13489999
Q ss_pred EcCcccccccccCCCCCcccccccCcch-HHHHHHhh
Q 029390 157 VDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYLANLLK 192 (194)
Q Consensus 157 lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL~~dL~ 192 (194)
|||.+++. ++. +....++| +||+++|+
T Consensus 180 iDT~~l~~-~~~--------~~~~~~~~w~~L~~~L~ 207 (394)
T PTZ00422 180 IDTWILSS-SFP--------YKKVSERAWQDLKATLE 207 (394)
T ss_pred EECchhcc-cCC--------ccccCHHHHHHHHHHHH
Confidence 99998874 221 22345578 99999995
No 3
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.93 E-value=1.4e-25 Score=186.19 Aligned_cols=155 Identities=39% Similarity=0.654 Sum_probs=113.7
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
++|+++||+|..+...+..+++.|.+++++.+|||||++||++|++|.....+.+|.+.|++++....+++|+|++||||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GNH 80 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGNH 80 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCCc
Confidence 48999999996434567889999998888789999999999999998766556778777877664333689999999999
Q ss_pred ccCCCcccccccccccCCCcceeee-eEEEeCC------eEEEEEEcCcccccccccCCCCCcccccccCcch-HHHHHH
Q 029390 119 DYRGDVEAQLSPVLRDIDSRWLCLR-SFIVNAE------IAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYLANL 190 (194)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~~~~p~-~ysf~~g------~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL~~d 190 (194)
|+..+..++..+.......+|.+|. ||+|+.+ +++||+|||+.....+...+.......+.+.++| +||+++
T Consensus 81 D~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~~~~Q~~wL~~~ 160 (277)
T cd07378 81 DYSGNVSAQIDYTKRPNSPRWTMPAYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKLAEEQLAWLEKT 160 (277)
T ss_pred ccCCCchheeehhccCCCCCccCcchheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhhHHHHHHHHHHH
Confidence 9997765554421111256676664 8899877 7999999999764332111100112345678899 999999
Q ss_pred hhc
Q 029390 191 LKV 193 (194)
Q Consensus 191 L~~ 193 (194)
|++
T Consensus 161 L~~ 163 (277)
T cd07378 161 LAA 163 (277)
T ss_pred HHh
Confidence 985
No 4
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=99.83 E-value=3e-20 Score=161.18 Aligned_cols=140 Identities=18% Similarity=0.218 Sum_probs=98.4
Q ss_pred CccCCCCCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCC
Q 029390 28 WFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSL 107 (194)
Q Consensus 28 ~~~~~~~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l 107 (194)
.|++|+....+.+|+++||+|... .+....+. +.+..++|+|+++||+.|+++-.. ++|. .|.+..+....
T Consensus 137 ~F~t~p~~~~~~~~~i~GDlG~~~--~~~s~~~~---~~~~~k~d~vlhiGDlsYa~~~~n---~~wD-~f~r~vEp~As 207 (452)
T KOG1378|consen 137 SFKTPPGQDSPTRAAIFGDMGCTE--PYTSTLRN---QEENLKPDAVLHIGDLSYAMGYSN---WQWD-EFGRQVEPIAS 207 (452)
T ss_pred EeECCCCccCceeEEEEccccccc--cccchHhH---HhcccCCcEEEEecchhhcCCCCc---cchH-HHHhhhhhhhc
Confidence 677778677899999999999632 22122221 112337999999999999987542 4564 45554444456
Q ss_pred CCceEEeccCcccCCCcccccccccccCCCcceee---------eeEEEeCCeEEEEEEcCcccccccccCCCCCccccc
Q 029390 108 AKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCL---------RSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWS 178 (194)
Q Consensus 108 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p---------~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~ 178 (194)
.+||+++.||||.+....- . +.+...||.|| .||||++|++|||+|+|.- |+ . -
T Consensus 208 ~vPymv~~GNHE~d~~~~~--~--F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~----~~-~--------~ 270 (452)
T KOG1378|consen 208 YVPYMVCSGNHEIDWPPQP--C--FVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTET----YY-N--------F 270 (452)
T ss_pred cCceEEecccccccCCCcc--c--ccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccc----cc-c--------c
Confidence 8999999999999875322 1 33445777776 4999999999999999962 21 1 0
Q ss_pred ccCcch-HHHHHHhhc
Q 029390 179 GIQPRK-SYLANLLKV 193 (194)
Q Consensus 179 ~l~~~Q-~WL~~dL~~ 193 (194)
.....| +||++||+.
T Consensus 271 ~~~~~QY~WL~~dL~~ 286 (452)
T KOG1378|consen 271 LKGTAQYQWLERDLAS 286 (452)
T ss_pred cccchHHHHHHHHHHH
Confidence 123478 999999985
No 5
>PLN02533 probable purple acid phosphatase
Probab=99.82 E-value=5.4e-20 Score=161.89 Aligned_cols=138 Identities=20% Similarity=0.287 Sum_probs=91.5
Q ss_pred CccCCCCCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCC
Q 029390 28 WFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSL 107 (194)
Q Consensus 28 ~~~~~~~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l 107 (194)
+|++|+. ..+++|+++||+|..+ ... ..++++ ++.+|||||++||++|+++. ...|.+ |.+....-..
T Consensus 130 ~F~T~p~-~~~~~f~v~GDlG~~~-~~~----~tl~~i-~~~~pD~vl~~GDl~y~~~~----~~~wd~-f~~~i~~l~s 197 (427)
T PLN02533 130 SFRTPPS-KFPIKFAVSGDLGTSE-WTK----STLEHV-SKWDYDVFILPGDLSYANFY----QPLWDT-FGRLVQPLAS 197 (427)
T ss_pred EEECCCC-CCCeEEEEEEeCCCCc-ccH----HHHHHH-HhcCCCEEEEcCccccccch----HHHHHH-HHHHhhhHhh
Confidence 6788775 4789999999998532 121 233333 34689999999999996532 244543 3333221233
Q ss_pred CCceEEeccCcccCCCcccccccccccCCCcceee---------eeEEEeCCeEEEEEEcCcccccccccCCCCCccccc
Q 029390 108 AKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCL---------RSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWS 178 (194)
Q Consensus 108 ~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p---------~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~ 178 (194)
.+|+++++||||.+........ .+.....+|.|| .||||++|++|||+|||+.- +
T Consensus 198 ~~P~m~~~GNHE~~~~~~~~~~-~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~--------------~- 261 (427)
T PLN02533 198 QRPWMVTHGNHELEKIPILHPE-KFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTD--------------F- 261 (427)
T ss_pred cCceEEeCccccccccccccCc-CccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCcc--------------c-
Confidence 6899999999999753211000 022224566665 48999999999999999630 1
Q ss_pred ccCcch-HHHHHHhhc
Q 029390 179 GIQPRK-SYLANLLKV 193 (194)
Q Consensus 179 ~l~~~Q-~WL~~dL~~ 193 (194)
....+| +||+++|++
T Consensus 262 ~~~~~Q~~WLe~dL~~ 277 (427)
T PLN02533 262 EPGSEQYQWLENNLKK 277 (427)
T ss_pred cCchHHHHHHHHHHHh
Confidence 134689 999999985
No 6
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=99.81 E-value=1.8e-19 Score=150.63 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=87.0
Q ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhh-hcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEe
Q 029390 36 DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGE-KLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNV 114 (194)
Q Consensus 36 ~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~-~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v 114 (194)
+.++||+++||+|..+...+ +.++++++ ..+|||||++||++|+.+... ..+|. .|.+.+..-...+|++++
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~----~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~--~~~~~-~~~~~~~~~~~~~P~~~~ 74 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNST----NTLDHLEKELGNYDAILHVGDLAYADGYNN--GSRWD-TFMRQIEPLASYVPYMVT 74 (294)
T ss_pred CCcEEEEEEEECCCCCCCcH----HHHHHHHhccCCccEEEEcCchhhhcCCcc--chhHH-HHHHHHHHHHhcCCcEEc
Confidence 46899999999995322222 23333333 368999999999998776431 13343 233322111236899999
Q ss_pred ccCcccCCCccccccccc------ccCCCcceeeeeEEEeCCeEEEEEEcCcccccccccCCCCCcccccccCcch-HHH
Q 029390 115 LGNHDYRGDVEAQLSPVL------RDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYL 187 (194)
Q Consensus 115 ~GNHD~~~~~~~~~~~~~------~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL 187 (194)
+||||+............ .........+.||+|++|++|||+|||+... ..+.+.++| +||
T Consensus 75 ~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~------------~~~~~~~~q~~WL 142 (294)
T cd00839 75 PGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDF------------YGDGPGSPQYDWL 142 (294)
T ss_pred CcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEeccccc------------ccCCCCcHHHHHH
Confidence 999999865432211000 0000111123589999999999999997421 023567889 999
Q ss_pred HHHhhc
Q 029390 188 ANLLKV 193 (194)
Q Consensus 188 ~~dL~~ 193 (194)
+++|++
T Consensus 143 ~~~L~~ 148 (294)
T cd00839 143 EADLAK 148 (294)
T ss_pred HHHHHH
Confidence 999984
No 7
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.73 E-value=2.3e-17 Score=136.20 Aligned_cols=144 Identities=15% Similarity=0.142 Sum_probs=86.1
Q ss_pred CCCeEEEEEeCCCCCCCC-C--------HH---HHHHHHHHHhh-hcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhh
Q 029390 36 DGSLSFLVVGDWGRRGAY-N--------QT---KVAHQMGIVGE-KLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIY 102 (194)
Q Consensus 36 ~~~~~f~~igD~g~~~~~-~--------~~---~v~~~~~~~~~-~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~ 102 (194)
+.+++|++++|.|..... . .+ .+.++++.+.+ ..+||+|+++||++. .+.......+..+.+.+.+
T Consensus 2 ~~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~-~~~~~~~~~~~~~~~~~~~ 80 (262)
T cd07395 2 SGPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVN-AMPGDELRERQVSDLKDVL 80 (262)
T ss_pred CCCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCC-CCcchhhHHHHHHHHHHHH
Confidence 368999999999963110 0 01 12223333322 238999999999994 3322111111123444444
Q ss_pred CCCCCCCceEEeccCcccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcccccccccCCCCCcccccccCc
Q 029390 103 TAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQP 182 (194)
Q Consensus 103 ~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~ 182 (194)
.....++|+++++||||.......+. +. .+...+++.+|+++.++++||+|||+.+. .+. ..+.+.+
T Consensus 81 ~~~~~~vp~~~i~GNHD~~~~~~~~~---~~-~f~~~~g~~~y~~~~~~~~~i~lds~~~~-----~~~----~~~~~~~ 147 (262)
T cd07395 81 SLLDPDIPLVCVCGNHDVGNTPTEES---IK-DYRDVFGDDYFSFWVGGVFFIVLNSQLFF-----DPS----EVPELAQ 147 (262)
T ss_pred hhccCCCcEEEeCCCCCCCCCCChhH---HH-HHHHHhCCcceEEEECCEEEEEecccccc-----Ccc----ccccchH
Confidence 32223799999999999964321110 00 01223457789999999999999997421 111 1235778
Q ss_pred ch-HHHHHHhhc
Q 029390 183 RK-SYLANLLKV 193 (194)
Q Consensus 183 ~Q-~WL~~dL~~ 193 (194)
+| +||+++|++
T Consensus 148 ~ql~WL~~~L~~ 159 (262)
T cd07395 148 AQDVWLEEQLEI 159 (262)
T ss_pred HHHHHHHHHHHH
Confidence 89 999999985
No 8
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.72 E-value=5.8e-17 Score=134.47 Aligned_cols=143 Identities=20% Similarity=0.199 Sum_probs=87.5
Q ss_pred eEEEEEeCCCCCCCC---------CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCC
Q 029390 39 LSFLVVGDWGRRGAY---------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAK 109 (194)
Q Consensus 39 ~~f~~igD~g~~~~~---------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~i 109 (194)
|||++++|+|..... +...+.++++++. +.+||+|+++||++. .+... .+.++. .+.+.+ ..+++
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~-~~~~d~vv~~GDlv~-~~~~~-~~~~~~-~~~~~l--~~l~~ 74 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWN-RESLDFVVQLGDIID-GDNAR-AEEALD-AVLAIL--DRLKG 74 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHH-cCCCCEEEECCCeec-CCCch-HHHHHH-HHHHHH--HhcCC
Confidence 699999999943211 0123344555554 457999999999994 33211 112232 333332 45789
Q ss_pred ceEEeccCcccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcccccccccCCC------------------
Q 029390 110 QWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPE------------------ 171 (194)
Q Consensus 110 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~~------------------ 171 (194)
|++++|||||+......... .......++.+|+|+.++++||+|||...+.. ..+.
T Consensus 75 p~~~v~GNHD~~~~~~~~~~----~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 148 (267)
T cd07396 75 PVHHVLGNHDLYNPSREYLL----LYTLLGLGAPYYSFSPGGIRFIVLDGYDISAL--GRPEDTPKAENADDNSNLGLYL 148 (267)
T ss_pred CEEEecCccccccccHhhhh----cccccCCCCceEEEecCCcEEEEEeCCccccc--cCCCCChhhhhHHHhchhhhhc
Confidence 99999999999864322211 01112234569999999999999999754210 0000
Q ss_pred ---CCcccccccCcch-HHHHHHhhc
Q 029390 172 ---DHVYDWSGIQPRK-SYLANLLKV 193 (194)
Q Consensus 172 ---~~~~~~~~l~~~Q-~WL~~dL~~ 193 (194)
....+.|.+.++| +||++.|++
T Consensus 149 ~~~~~~~~~G~l~~~Ql~WL~~~L~~ 174 (267)
T cd07396 149 SEPRFVDWNGGIGEEQLQWLRNELQE 174 (267)
T ss_pred cCccceeccCcCCHHHHHHHHHHHHH
Confidence 0011246788899 999999974
No 9
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.68 E-value=4.2e-16 Score=126.55 Aligned_cols=130 Identities=17% Similarity=0.237 Sum_probs=81.9
Q ss_pred EEEEEeCCCCCCCC-------C-HHHHHHHHHHHhhh-cCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCc
Q 029390 40 SFLVVGDWGRRGAY-------N-QTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQ 110 (194)
Q Consensus 40 ~f~~igD~g~~~~~-------~-~~~v~~~~~~~~~~-~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP 110 (194)
||++++|+|..... . ...+.+.++.+.+. .+||+|+++||++.. + .++..+.+.+.+ ..+++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~-----~~~~~~~~~~~l--~~~~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-G-----SPESYERLRELL--AALPIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-C-----CHHHHHHHHHHH--hhcCCC
Confidence 68999999964221 1 12333344444332 389999999999942 2 122223344433 356899
Q ss_pred eEEeccCcccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcccccccccCCCCCcccccccCcch-HHHHH
Q 029390 111 WYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYLAN 189 (194)
Q Consensus 111 ~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL~~ 189 (194)
++.++||||.......... .. ..-.++.+|+|+.++++||+|||.... ...+.+.++| +||++
T Consensus 73 ~~~v~GNHD~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~i~lds~~~~-----------~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 73 VYLLPGNHDDRAAMRAVFP----EL-PPAPGFVQYVVDLGGWRLILLDSSVPG-----------QHGGELCAAQLDWLEA 136 (240)
T ss_pred EEEeCCCCCCHHHHHHhhc----cc-cccccccceeEecCCEEEEEEeCCCCC-----------CcCCEECHHHHHHHHH
Confidence 9999999998643221111 00 001234588999999999999997421 1234578889 99999
Q ss_pred Hhhc
Q 029390 190 LLKV 193 (194)
Q Consensus 190 dL~~ 193 (194)
.|++
T Consensus 137 ~L~~ 140 (240)
T cd07402 137 ALAE 140 (240)
T ss_pred HHHh
Confidence 9975
No 10
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.67 E-value=8.2e-16 Score=128.06 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=86.9
Q ss_pred ccCCCCCCCCeEEEEEeCCCCCCCC--------CHHHHHHHHHHHhhh-cCccEEEEcCCccccCCCCCCCcHHHHHHhH
Q 029390 29 FEHPAKPDGSLSFLVVGDWGRRGAY--------NQTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFV 99 (194)
Q Consensus 29 ~~~~~~~~~~~~f~~igD~g~~~~~--------~~~~v~~~~~~~~~~-~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~ 99 (194)
++++.....+++|++++|+|..... ....+.+.++++.+. .+|||||++||++. ++. ...+ +.+.
T Consensus 5 ~~~~~~~~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~----~~~~-~~~~ 78 (275)
T PRK11148 5 LTLPLAGEARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHS----SEAY-QHFA 78 (275)
T ss_pred cccccCCCCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCC----HHHH-HHHH
Confidence 3456666788999999999952211 112344455555443 47999999999993 321 1222 3344
Q ss_pred hhhCCCCCCCceEEeccCcccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcccccccccCCCCCcccccc
Q 029390 100 NIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSG 179 (194)
Q Consensus 100 ~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~ 179 (194)
+.+ ..+++|+|.+|||||........+.. ..+ .+.++.+..++++||+|||... + ...|.
T Consensus 79 ~~l--~~l~~Pv~~v~GNHD~~~~~~~~~~~------~~~-~~~~~~~~~~~~~~i~Lds~~~--------g---~~~G~ 138 (275)
T PRK11148 79 EGI--APLRKPCVWLPGNHDFQPAMYSALQD------AGI-SPAKHVLIGEHWQILLLDSQVF--------G---VPHGE 138 (275)
T ss_pred HHH--hhcCCcEEEeCCCCCChHHHHHHHhh------cCC-CccceEEecCCEEEEEecCCCC--------C---CcCCE
Confidence 433 46789999999999986432221110 011 1233444556799999999631 1 12466
Q ss_pred cCcch-HHHHHHhhc
Q 029390 180 IQPRK-SYLANLLKV 193 (194)
Q Consensus 180 l~~~Q-~WL~~dL~~ 193 (194)
+.++| +||++.|++
T Consensus 139 l~~~ql~wL~~~L~~ 153 (275)
T PRK11148 139 LSEYQLEWLERKLAD 153 (275)
T ss_pred eCHHHHHHHHHHHhh
Confidence 88899 999999975
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.62 E-value=5.5e-15 Score=122.06 Aligned_cols=143 Identities=19% Similarity=0.238 Sum_probs=80.7
Q ss_pred EEEEeCCCCCCCCCHHH-HH--HHHHHHhhhcCccEEEEcCCccccCCCC----CCCc-HHHHHHhHhhhC-CCCC-CCc
Q 029390 41 FLVVGDWGRRGAYNQTK-VA--HQMGIVGEKLKIDFIISTGDNFYDDGLT----GVDD-AAFFESFVNIYT-APSL-AKQ 110 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~-v~--~~~~~~~~~~~pdfvl~~GD~~Y~~G~~----~~~d-~~~~~~~~~~~~-~~~l-~iP 110 (194)
|++++|+|.. ....+. .. +.+.+..++.+||+++++||++ ++... ..++ .+|. .|.+.+. ...+ .+|
T Consensus 2 ~~~iSDlH~g-~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~-d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p 78 (256)
T cd07401 2 FVHISDIHVS-SFHPPNRAQDETFCSNFIDVIKPALVLATGDLT-DNKTGNKLPSYQYQEEWQ-KYYNILKESSVINKEK 78 (256)
T ss_pred EEEecccccC-CcCchhhhhHHHHHHHHHHhhCCCEEEEccccc-cccccCCCcccccHHHHH-HHHHHHHHhCCCCcce
Confidence 7899999963 222111 11 2223334567999999999998 33321 1112 2343 4444332 2233 589
Q ss_pred eEEeccCcccCCCccc--ccccccccCCCccee-ee-eEE--EeCCeEEEEEEcCcccccccccCCCCCcccccccCcch
Q 029390 111 WYNVLGNHDYRGDVEA--QLSPVLRDIDSRWLC-LR-SFI--VNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK 184 (194)
Q Consensus 111 ~~~v~GNHD~~~~~~~--~~~~~~~~~~~~~~~-p~-~ys--f~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q 184 (194)
++.++||||+.+.... ...+ +.. +.++.+ +. +|. +..++++||+|||....+ +.......|.+.++|
T Consensus 79 ~~~v~GNHD~~~~~~~~~~~~~-~~~-y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~-----~~~~~~~~g~l~~~q 151 (256)
T cd07401 79 WFDIRGNHDLFNIPSLDSENNY-YRK-YSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPG-----PKRPFNFFGSLDKKL 151 (256)
T ss_pred EEEeCCCCCcCCCCCccchhhH-HHH-hheecCCCccceEEEecCCCEEEEEEcCccCCC-----CCCCCceeccCCHHH
Confidence 9999999999754321 1111 111 112222 22 333 335899999999985311 111112346788899
Q ss_pred -HHHHHHhhc
Q 029390 185 -SYLANLLKV 193 (194)
Q Consensus 185 -~WL~~dL~~ 193 (194)
+||+++|++
T Consensus 152 l~wL~~~L~~ 161 (256)
T cd07401 152 LDRLEKELEK 161 (256)
T ss_pred HHHHHHHHHh
Confidence 999999964
No 12
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.56 E-value=1.2e-14 Score=120.14 Aligned_cols=119 Identities=23% Similarity=0.291 Sum_probs=78.1
Q ss_pred HHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHH---hHhhhCCCCCCCceEEeccCcccCCCcccccccccccCCC
Q 029390 61 QMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFES---FVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDS 137 (194)
Q Consensus 61 ~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~---~~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~ 137 (194)
....+.+..+||+|+++||++ +.|... .+.+|.+. |.+++......+|++.+|||||+......... ....+.
T Consensus 36 ~~~~~~~~l~PD~vv~lGDL~-d~G~~~-~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~~~--~~~rf~ 111 (257)
T cd08163 36 NWRYMQKQLKPDSTIFLGDLF-DGGRDW-ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVVLP--VRQRFE 111 (257)
T ss_pred HHHHHHHhcCCCEEEEecccc-cCCeeC-cHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCCHH--HHHHHH
Confidence 344445567999999999998 555432 45667544 44544322225899999999998654211111 112245
Q ss_pred cceeeeeEEEeCCeEEEEEEcCcccccccccCCCCCcccccccCcch-HHHHHHhhc
Q 029390 138 RWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYLANLLKV 193 (194)
Q Consensus 138 ~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL~~dL~~ 193 (194)
+++++.+|+++.++++||+|||..+.+. ..+.+...| +||++.|+.
T Consensus 112 ~~Fg~~~~~~~~~~~~fV~Lds~~l~~~----------~~~~~~~~~~~~l~~~l~~ 158 (257)
T cd08163 112 KYFGPTSRVIDVGNHTFVILDTISLSNK----------DDPDVYQPPREFLHSFSAM 158 (257)
T ss_pred HHhCCCceEEEECCEEEEEEccccccCC----------cccccchhHHHHHHhhhhc
Confidence 5567778999999999999999754321 123466678 999998763
No 13
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.27 E-value=1.8e-11 Score=98.54 Aligned_cols=76 Identities=22% Similarity=0.242 Sum_probs=45.3
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHH---HHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhC-CCCCCCceEEe
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMG---IVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-APSLAKQWYNV 114 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~---~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~-~~~l~iP~~~v 114 (194)
|||+++||+|...........+.++ +.+++.+||+|+++||++. .+.. ..+|.. +.+.+. ..+.++|++.+
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~-~~~~---~~~~~~-~~~~~~~l~~~~~p~~~~ 75 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVD-DGDN---DAEWEA-ADKAFARLDKAGIPYSVL 75 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccC-CCCC---HHHHHH-HHHHHHHHHHcCCcEEEE
Confidence 6899999988522112232333333 3334568999999999993 3321 223432 222221 12246999999
Q ss_pred ccCcc
Q 029390 115 LGNHD 119 (194)
Q Consensus 115 ~GNHD 119 (194)
+||||
T Consensus 76 ~GNHD 80 (214)
T cd07399 76 AGNHD 80 (214)
T ss_pred CCCCc
Confidence 99999
No 14
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.26 E-value=2.5e-11 Score=96.37 Aligned_cols=81 Identities=17% Similarity=0.164 Sum_probs=51.5
Q ss_pred CeEEEEEeCCCCCCCC-------CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhC-CCCCCC
Q 029390 38 SLSFLVVGDWGRRGAY-------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-APSLAK 109 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~-------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~-~~~l~i 109 (194)
++|+++++|+|..... ......+.+.++.+..+||+||++||+++...... +..+.+..++. ....++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~----~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTND----NSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCch----HHHHHHHHHHHHHHHcCC
Confidence 6899999999963211 11234445666666789999999999996543221 11122222221 123579
Q ss_pred ceEEeccCcccCC
Q 029390 110 QWYNVLGNHDYRG 122 (194)
Q Consensus 110 P~~~v~GNHD~~~ 122 (194)
|++.++||||..+
T Consensus 78 p~~~~~GNHD~~g 90 (199)
T cd07383 78 PWAATFGNHDGYD 90 (199)
T ss_pred CEEEECccCCCCC
Confidence 9999999999443
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.26 E-value=2.4e-11 Score=101.97 Aligned_cols=146 Identities=19% Similarity=0.153 Sum_probs=76.7
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhh-cCccEEEEcCCccccCCCCCCCcHH---HHHHhHhhhCCCCCCCceEEeccC
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAA---FFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~-~~pdfvl~~GD~~Y~~G~~~~~d~~---~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
.-.|+.|. . .....+..+++.+.+. .+|||||++||++............ ....+.+.+.....++|+++++||
T Consensus 41 ~~~G~~~C-D-~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 41 GPWGDYGC-D-SPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCcCcCC-C-CcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 34566552 2 2345555666665443 4899999999999543221111111 011122212111246899999999
Q ss_pred cccCCCccc------cccc-ccccCCCccee---------eeeEEEe-CCeEEEEEEcCcccccccccCCCCCccccccc
Q 029390 118 HDYRGDVEA------QLSP-VLRDIDSRWLC---------LRSFIVN-AEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGI 180 (194)
Q Consensus 118 HD~~~~~~~------~~~~-~~~~~~~~~~~---------p~~ysf~-~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l 180 (194)
||....... +..+ .+......|.. -.||++. .+++++|+|||+.+..... ...+ .....
T Consensus 119 HD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~--~~~~--~~~~~ 194 (296)
T cd00842 119 HDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNF--WLLG--SNETD 194 (296)
T ss_pred CCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccCh--hhhc--cCCCC
Confidence 999743110 0000 01111111211 1488888 7999999999986431100 0000 12234
Q ss_pred Ccch-HHHHHHhhc
Q 029390 181 QPRK-SYLANLLKV 193 (194)
Q Consensus 181 ~~~Q-~WL~~dL~~ 193 (194)
...| +||+++|++
T Consensus 195 ~~~Ql~WL~~~L~~ 208 (296)
T cd00842 195 PAGQLQWLEDELQE 208 (296)
T ss_pred HHHHHHHHHHHHHH
Confidence 4679 999999985
No 16
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=99.22 E-value=1.1e-10 Score=101.15 Aligned_cols=134 Identities=20% Similarity=0.209 Sum_probs=88.7
Q ss_pred CCCccCCCC-----CCCCeEEEEEeCCCCCCCCC-------------HHHHHHHHHHHhhhcCccEEEEcCCccccCCCC
Q 029390 26 LPWFEHPAK-----PDGSLSFLVVGDWGRRGAYN-------------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLT 87 (194)
Q Consensus 26 ~~~~~~~~~-----~~~~~~f~~igD~g~~~~~~-------------~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~ 87 (194)
+.++.+|.. .+..+|+++++|-+.-+... ..-+.+.......-.+||.++++||++ +.|..
T Consensus 31 ~~~c~Wp~~~~~~~~~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLf-DeG~~ 109 (410)
T KOG3662|consen 31 LFQCQWPGKKQWASNENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLF-DEGQW 109 (410)
T ss_pred cccccCCccccccCCCCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccc-ccCcc
Confidence 557778752 35789999999976544111 111222222222347999999999999 65654
Q ss_pred CCCcHHHHHHh---HhhhCCCCCCCceEEeccCcccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCccccc
Q 029390 88 GVDDAAFFESF---VNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVN 164 (194)
Q Consensus 88 ~~~d~~~~~~~---~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~ 164 (194)
.++++|.+.+ ++++. .+.++|+..+|||||.+.....-.+ ....+...++|..-+|+.++..|+++|++.+++
T Consensus 110 -~~~eEf~~~~~RfkkIf~-~k~~~~~~~i~GNhDIGf~~~~~~~--~i~Rfe~~fg~~~r~f~v~~~tf~~~d~~~ls~ 185 (410)
T KOG3662|consen 110 -AGDEEFKKRYERFKKIFG-RKGNIKVIYIAGNHDIGFGNELIPE--WIDRFESVFGPTERRFDVGNLTFVMFDSNALSG 185 (410)
T ss_pred -CChHHHHHHHHHHHHhhC-CCCCCeeEEeCCccccccccccchh--HHHHHHHhhcchhhhhccCCceeEEeeehhhcC
Confidence 3678888764 44443 3468999999999999875421110 122234455777777999999999999987653
No 17
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.19 E-value=2.9e-10 Score=94.05 Aligned_cols=132 Identities=18% Similarity=0.187 Sum_probs=78.7
Q ss_pred eEEEEEeCCCCC--CCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEecc
Q 029390 39 LSFLVVGDWGRR--GAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (194)
Q Consensus 39 ~~f~~igD~g~~--~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~G 116 (194)
+++++|+|.|.. .......+...++++ +..+||++|.+||+.. .|.. ..+ +...+......+..|++++||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i-~~~~~D~~v~tGDl~~-~~~~----~~~-~~~~~~l~~~~~~~~~~~vpG 73 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAI-EQLKPDLLVVTGDLTN-DGEP----EEY-RRLKELLARLELPAPVIVVPG 73 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHH-hcCCCCEEEEccCcCC-CCCH----HHH-HHHHHHHhhccCCCceEeeCC
Confidence 479999999974 222223333344444 4578999999999993 3432 122 222222222367889999999
Q ss_pred CcccCCCcccccccccccCCCcceeeeeEEEeC-CeEEEEEEcCcccccccccCCCCCcccccccCcch-HHHHHHhhc
Q 029390 117 NHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNA-EIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYLANLLKV 193 (194)
Q Consensus 117 NHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~-g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL~~dL~~ 193 (194)
|||.+........... ..++ ...-.... +++++|.+||.... ...|.+.+.| .||++.|++
T Consensus 74 NHD~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~d~~~~~-----------~~~G~~~~~q~~~l~~~l~~ 136 (301)
T COG1409 74 NHDARVVNGEAFSDQF---FNRY--AVLVGACSSGGWRVIGLDSSVPG-----------VPLGRLGAEQLDWLEEALAA 136 (301)
T ss_pred CCcCCchHHHHhhhhh---cccC--cceEeeccCCceEEEEecCCCCC-----------CCCCEECHHHHHHHHHHHHh
Confidence 9999864322111000 0000 00111222 67899999997421 2346788999 999999974
No 18
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.10 E-value=7.7e-10 Score=97.82 Aligned_cols=41 Identities=17% Similarity=0.124 Sum_probs=33.6
Q ss_pred eeEEEe-CCeEEEEEEcCcccccccccCCCCCcccccccCcch-HHHHHHhhc
Q 029390 143 RSFIVN-AEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYLANLLKV 193 (194)
Q Consensus 143 ~~ysf~-~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL~~dL~~ 193 (194)
.||+|+ .++++||+|||+.. +..+.|.+.++| +||+++|++
T Consensus 292 ~YYSFd~~ggvrfIvLDSt~~----------~G~~~G~L~eeQL~WLeqeLa~ 334 (496)
T TIGR03767 292 GYYTFDIAGGVRGISMDTTNR----------AGGDEGSLGQTQFKWIKDTLRA 334 (496)
T ss_pred ceEEEEeECCEEEEEEeCCCc----------CCCcCCccCHHHHHHHHHHHhc
Confidence 399999 89999999999742 113467799999 999999985
No 19
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.04 E-value=3.4e-09 Score=89.39 Aligned_cols=86 Identities=28% Similarity=0.387 Sum_probs=58.3
Q ss_pred CCCCCeEEEEEeCCCCCCCC---------CH------HHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHh
Q 029390 34 KPDGSLSFLVVGDWGRRGAY---------NQ------TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESF 98 (194)
Q Consensus 34 ~~~~~~~f~~igD~g~~~~~---------~~------~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~ 98 (194)
..+.+||+++++|+|..... .+ ......|.++.+.++||+|+++||+++.. +..|. .+.+
T Consensus 49 ~~~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~---~t~Da--~~sl 123 (379)
T KOG1432|consen 49 REDGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGH---STQDA--ATSL 123 (379)
T ss_pred cCCCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccc---ccHhH--HHHH
Confidence 56789999999999963110 11 12234677877888999999999999642 22232 2333
Q ss_pred Hhhh-CCCCCCCceEEeccCcccCCCc
Q 029390 99 VNIY-TAPSLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 99 ~~~~-~~~~l~iP~~~v~GNHD~~~~~ 124 (194)
.... +..+-+|||.+++||||-.+..
T Consensus 124 ~kAvaP~I~~~IPwA~~lGNHDdes~l 150 (379)
T KOG1432|consen 124 MKAVAPAIDRKIPWAAVLGNHDDESDL 150 (379)
T ss_pred HHHhhhHhhcCCCeEEEeccccccccc
Confidence 3322 2235689999999999998764
No 20
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.99 E-value=1.8e-09 Score=89.87 Aligned_cols=82 Identities=17% Similarity=0.256 Sum_probs=50.1
Q ss_pred CCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEE
Q 029390 34 KPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYN 113 (194)
Q Consensus 34 ~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~ 113 (194)
+...++|+++++|+|.........+.+.+++ .++.+||+|+++||++. .+. ..+...+.+.+... ....|+|+
T Consensus 45 ~~~~~~rI~~lSDlH~~~~~~~~~l~~~v~~-i~~~~pDlVli~GD~~d-~~~-~~~~~~~~~~L~~L----~~~~pv~~ 117 (271)
T PRK11340 45 DNAAPFKILFLADLHYSRFVPLSLISDAIAL-GIEQKPDLILLGGDYVL-FDM-PLNFSAFSDVLSPL----AECAPTFA 117 (271)
T ss_pred CCCCCcEEEEEcccCCCCcCCHHHHHHHHHH-HHhcCCCEEEEccCcCC-CCc-cccHHHHHHHHHHH----hhcCCEEE
Confidence 3455799999999996322223334444444 34579999999999983 111 11112233223222 11379999
Q ss_pred eccCcccCC
Q 029390 114 VLGNHDYRG 122 (194)
Q Consensus 114 v~GNHD~~~ 122 (194)
|+||||+..
T Consensus 118 V~GNHD~~~ 126 (271)
T PRK11340 118 CFGNHDRPV 126 (271)
T ss_pred ecCCCCccc
Confidence 999999864
No 21
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=98.98 E-value=1.5e-09 Score=80.66 Aligned_cols=78 Identities=23% Similarity=0.284 Sum_probs=47.3
Q ss_pred eEEEEEeCCCCCCCCCHHH--HHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEecc
Q 029390 39 LSFLVVGDWGRRGAYNQTK--VAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~--v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~G 116 (194)
+||+++||+|... ... ....+.+.....++|+||++||+++.... ..................+|+++++|
T Consensus 1 ~ri~~isD~H~~~---~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~G 73 (200)
T PF00149_consen 1 MRILVISDLHGGY---DDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNP----SEEWRAQFWFFIRLLNPKIPVYFILG 73 (200)
T ss_dssp EEEEEEEBBTTTH---HHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSH----HHHHHHHHHHHHHHHHTTTTEEEEE-
T ss_pred CeEEEEcCCCCCC---cchhHHHHHHHHHhccCCCCEEEeeccccccccc----cccchhhhccchhhhhcccccccccc
Confidence 6999999999621 111 13344445567899999999999954321 11111111001111346799999999
Q ss_pred CcccCCC
Q 029390 117 NHDYRGD 123 (194)
Q Consensus 117 NHD~~~~ 123 (194)
|||+...
T Consensus 74 NHD~~~~ 80 (200)
T PF00149_consen 74 NHDYYSG 80 (200)
T ss_dssp TTSSHHH
T ss_pred cccccee
Confidence 9999853
No 22
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.94 E-value=6.9e-09 Score=84.69 Aligned_cols=105 Identities=16% Similarity=0.089 Sum_probs=56.0
Q ss_pred EEEEEeCCCCCC-CCCHHH-HHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccC
Q 029390 40 SFLVVGDWGRRG-AYNQTK-VAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 40 ~f~~igD~g~~~-~~~~~~-v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
|+++++|+|... ...... +.+.+..+ ++.++|+|+.+||++ +.. ++..+.++.+. +...+|+|.++||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~-~~~~~d~vv~~GDl~-~~~------~~~~~~~~~l~--~~~~~pv~~v~GN 70 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYL-KKQKIDHLHIAGDIS-NDF------QRSLPFIEKLQ--ELKGIKVTFNAGN 70 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHH-HhcCCCEEEECCccc-cch------hhHHHHHHHHH--HhcCCcEEEECCC
Confidence 589999999521 112222 22233333 346899999999999 221 11112222221 1145899999999
Q ss_pred cccCCCcc-cccccccccCCCcceee-eeEEEeCCeEEEEEEc
Q 029390 118 HDYRGDVE-AQLSPVLRDIDSRWLCL-RSFIVNAEIAEFIFVD 158 (194)
Q Consensus 118 HD~~~~~~-~~~~~~~~~~~~~~~~p-~~ysf~~g~v~fI~lD 158 (194)
||+..+.. .++. ......... ..+.+..++++||.++
T Consensus 71 HD~~~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~ig~~ 109 (239)
T TIGR03729 71 HDMLKDLTYEEIE----SNDSPLYLHNRFIDIPNTQWRIIGNN 109 (239)
T ss_pred CCCCCCCCHHHHH----hccchhhhcccccccCCCceEEEeec
Confidence 99863221 1121 000011111 2344545778999988
No 23
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.88 E-value=7.2e-09 Score=84.38 Aligned_cols=140 Identities=15% Similarity=0.045 Sum_probs=70.1
Q ss_pred EEEEeCCCCCC-------CCCH--HHHHHHHHHHhhhc--CccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCC
Q 029390 41 FLVVGDWGRRG-------AYNQ--TKVAHQMGIVGEKL--KIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAK 109 (194)
Q Consensus 41 f~~igD~g~~~-------~~~~--~~v~~~~~~~~~~~--~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~i 109 (194)
+.+++|+|... ...+ .+..+.+.+..+.. +||+|+++||++. .+. ..+....... + ..+..
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~-~~~----~~~~~~~l~~-l--~~l~~ 72 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISW-AMK----LEEAKLDLAW-I--DALPG 72 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCcc-CCC----hHHHHHHHHH-H--HhCCC
Confidence 36889999531 1222 34444444433333 8999999999983 211 1122222221 1 23456
Q ss_pred ceEEeccCcccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcccccccccCC---CC--CcccccccCcch
Q 029390 110 QWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDP---ED--HVYDWSGIQPRK 184 (194)
Q Consensus 110 P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~---~~--~~~~~~~l~~~Q 184 (194)
|+|.|+||||+.......+...+.+ ..+....+.++..+++.|+.++..... +..+ .+ -...-+++.++|
T Consensus 73 ~v~~V~GNHD~~~~~~~~~~~~l~~--~~~~~~~n~~~~~~~i~i~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 147 (232)
T cd07393 73 TKVLLKGNHDYWWGSASKLRKALEE--SRLALLFNNAYIDDDVAICGTRGWDNP---GNPWPPINETLKVEEDEKIFERE 147 (232)
T ss_pred CeEEEeCCccccCCCHHHHHHHHHh--cCeEEeccCcEEECCEEEEEEEeeCCC---CCccccccccccchhHHHHHHHH
Confidence 8999999999853211111000100 011111144555678999998632111 0111 00 001123455678
Q ss_pred -HHHHHHhhc
Q 029390 185 -SYLANLLKV 193 (194)
Q Consensus 185 -~WL~~dL~~ 193 (194)
+||++.|++
T Consensus 148 l~~l~~~L~~ 157 (232)
T cd07393 148 LERLELSLKA 157 (232)
T ss_pred HHHHHHHHHH
Confidence 999999874
No 24
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.85 E-value=2.6e-08 Score=77.38 Aligned_cols=114 Identities=19% Similarity=0.112 Sum_probs=63.1
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCccc
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (194)
++++||+|.. ...+.. ...++.+||+||.+||++. .+.. ... ..+ +.+ ..+++|++.++||||.
T Consensus 1 i~~~sD~H~~----~~~~~~---~~~~~~~~D~vv~~GDl~~-~~~~----~~~-~~~-~~l--~~~~~p~~~v~GNHD~ 64 (188)
T cd07392 1 ILAISDIHGD----VEKLEA---IILKAEEADAVIVAGDITN-FGGK----EAA-VEI-NLL--LAIGVPVLAVPGNCDT 64 (188)
T ss_pred CEEEEecCCC----HHHHHH---HHhhccCCCEEEECCCccC-cCCH----HHH-HHH-HHH--HhcCCCEEEEcCCCCC
Confidence 4789999952 122222 2234568999999999983 3211 111 122 221 3567999999999997
Q ss_pred CCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcccccccccCCCCCcccccccCcch-HHH
Q 029390 121 RGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYL 187 (194)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL 187 (194)
...... .. ..........+..+++.|+.+++.... +. ...+.+.++| +|+
T Consensus 65 ~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~---~~~~~~~~~~l~~~ 115 (188)
T cd07392 65 PEILGL-LT-------SAGLNLHGKVVEVGGYTFVGIGGSNPT------PF---NTPIELSEEEIVSD 115 (188)
T ss_pred HHHHHh-hh-------cCcEecCCCEEEECCEEEEEeCCCCCC------CC---CCccccCHHHHHHh
Confidence 532211 11 111111122344567999999985311 10 1123466778 887
No 25
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.84 E-value=2.8e-08 Score=79.68 Aligned_cols=79 Identities=22% Similarity=0.287 Sum_probs=48.6
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccC
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
.+|+++++|+|.........+.+.++.+ ++.+||+++++||++... ... . +.+.+.+.......|++.++||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~-~~~~~d~vl~~GD~~~~~-~~~---~---~~~~~~l~~l~~~~~v~~v~GN 72 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKI-NALKPDLVVLTGDLVDGS-VDV---L---ELLLELLKKLKAPLGVYAVLGN 72 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHH-hccCCCEEEEcCcccCCc-chh---h---HHHHHHHhccCCCCCEEEECCC
Confidence 4799999999963222222344444443 456899999999999432 111 1 1222222212235899999999
Q ss_pred cccCCCc
Q 029390 118 HDYRGDV 124 (194)
Q Consensus 118 HD~~~~~ 124 (194)
||+....
T Consensus 73 HD~~~~~ 79 (223)
T cd07385 73 HDYYSGD 79 (223)
T ss_pred cccccCc
Confidence 9997653
No 26
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=98.83 E-value=3.5e-08 Score=86.87 Aligned_cols=46 Identities=13% Similarity=0.214 Sum_probs=33.6
Q ss_pred eEEEe-CCeE--EEEEEcCcccccccccCCCCCcccccccCcch-HHHHHHhhc
Q 029390 144 SFIVN-AEIA--EFIFVDTTPFVNKYFTDPEDHVYDWSGIQPRK-SYLANLLKV 193 (194)
Q Consensus 144 ~ysf~-~g~v--~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~~Q-~WL~~dL~~ 193 (194)
+|+|+ .+++ |+|+|||....+ +....+.+.|.+.++| +||+++|++
T Consensus 294 yYsFd~~g~vplrvIvLDSt~~~~----~~s~pG~~~G~Ld~eQLaWLe~~La~ 343 (492)
T TIGR03768 294 CYSFVPKSDVPLKVIVLDDTQSEH----DGSHDIHGHGSLDAKRWDWLKAELAR 343 (492)
T ss_pred eeEEecCCCcceEEEEECCCcccc----ccCCCCCcceeeCHHHHHHHHHHHHh
Confidence 89999 4745 999999975321 1111135678899999 999999973
No 27
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.74 E-value=6e-08 Score=77.40 Aligned_cols=115 Identities=15% Similarity=0.147 Sum_probs=60.7
Q ss_pred EEEEEeCCCCCCCCC-------HH---HHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhC-CCCCC
Q 029390 40 SFLVVGDWGRRGAYN-------QT---KVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-APSLA 108 (194)
Q Consensus 40 ~f~~igD~g~~~~~~-------~~---~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~-~~~l~ 108 (194)
||++++|+|...... .+ ...+.+.+.+.+.+||+|+++||++.... . ..+....+.+.+. ....+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~-~---~~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN-P---SPEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC-C---CHHHHHHHHHHHHHHHHCC
Confidence 689999999632111 11 12222333344678999999999984321 1 1111122222221 11237
Q ss_pred CceEEeccCcccCCCcccccccccccCCCcce---------eeeeEEEeCCeEEEEEEcCcc
Q 029390 109 KQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWL---------CLRSFIVNAEIAEFIFVDTTP 161 (194)
Q Consensus 109 iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~---------~p~~ysf~~g~v~fI~lDT~~ 161 (194)
+|+++++||||........... . ....+. .+....++.+++.|+.++...
T Consensus 77 ~~v~~~~GNHD~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~ 135 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGALSPL--L-ALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLR 135 (223)
T ss_pred CCEEEecCCCCCccccccccch--H-hhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCC
Confidence 8999999999998653221110 0 011111 112334455678888888753
No 28
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=98.69 E-value=7.6e-08 Score=85.60 Aligned_cols=160 Identities=13% Similarity=0.144 Sum_probs=65.5
Q ss_pred CccCCCCC-CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCC-------------------
Q 029390 28 WFEHPAKP-DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLT------------------- 87 (194)
Q Consensus 28 ~~~~~~~~-~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~------------------- 87 (194)
+|+|++.. ...+||++.+..+... . .......++++.+|||+|++||.+|..+..
T Consensus 94 ~~rT~p~~~~~~~r~a~~SC~~~~~--~---~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~ 168 (453)
T PF09423_consen 94 RFRTAPDGDPDPFRFAFGSCQNYED--G---YFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHE 168 (453)
T ss_dssp EEE--TT-----EEEEEE----CCC--------HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----SSSS
T ss_pred EEEcCCCCCCCceEEEEECCCCccc--C---hHHHHHhhhccCCCcEEEEeCCeeeccCCcccccccccccccccccccc
Confidence 66776533 4579999999965311 1 134555666556899999999999988520
Q ss_pred CCCcHHHHHHhHhhhCCCC-----CCCceEEeccCcccCCCcc---ccc-----cc-------------ccccCCCcc--
Q 029390 88 GVDDAAFFESFVNIYTAPS-----LAKQWYNVLGNHDYRGDVE---AQL-----SP-------------VLRDIDSRW-- 139 (194)
Q Consensus 88 ~~~d~~~~~~~~~~~~~~~-----l~iP~~~v~GNHD~~~~~~---~~~-----~~-------------~~~~~~~~~-- 139 (194)
...-..+...|........ ..+|++.+.=.||+..+.. .+. .. +|.+.....
T Consensus 169 ~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~~ 248 (453)
T PF09423_consen 169 AETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDPP 248 (453)
T ss_dssp --SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-B
T ss_pred cccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCcc
Confidence 0011122223332222111 1689999999999975532 000 00 010000000
Q ss_pred --eeeeeEEEeCCe-EEEEEEcCcccccccccCCCC-------CcccccccCcch-HHHHHHhhc
Q 029390 140 --LCLRSFIVNAEI-AEFIFVDTTPFVNKYFTDPED-------HVYDWSGIQPRK-SYLANLLKV 193 (194)
Q Consensus 140 --~~p~~ysf~~g~-v~fI~lDT~~~~~~y~~~~~~-------~~~~~~~l~~~Q-~WL~~dL~~ 193 (194)
....|++|.+|+ +.|++||+-.+... ...+.. ....-.-|.++| +||++.|++
T Consensus 249 ~~~~~~y~~~~~G~~~~~~~LD~R~~R~~-~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~ 312 (453)
T PF09423_consen 249 GDQGRIYRSFRYGDLVEFFMLDTRSYRSP-PPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS 312 (453)
T ss_dssp TTB----EEEEETTTEEEEE--SSSS-----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH
T ss_pred CCCCceEEEEecCCceeEEEEechhcccc-ccccccccccccccCCccCcCCHHHHHHHHHHHhc
Confidence 011377899999 99999999754321 000000 001112366789 999999975
No 29
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.66 E-value=9.1e-08 Score=71.67 Aligned_cols=74 Identities=20% Similarity=0.182 Sum_probs=41.7
Q ss_pred EEEEeCCCCCCCCCHH--HHH---HHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhC-CCCCCCceEEe
Q 029390 41 FLVVGDWGRRGAYNQT--KVA---HQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-APSLAKQWYNV 114 (194)
Q Consensus 41 f~~igD~g~~~~~~~~--~v~---~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~-~~~l~iP~~~v 114 (194)
+++++|+|........ ... +.+.+..++.+||+|+++||+++.. . ..++. .+.+.+. .....+|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~-~----~~~~~-~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRG-L----PEEFE-EAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCC-C----HHHHH-HHHHHHHHccccCCcEEEe
Confidence 4789999964321111 111 1123334567899999999999532 1 12222 2222221 11222699999
Q ss_pred ccCccc
Q 029390 115 LGNHDY 120 (194)
Q Consensus 115 ~GNHD~ 120 (194)
+||||.
T Consensus 75 ~GNHD~ 80 (144)
T cd07400 75 PGNHDV 80 (144)
T ss_pred CCCCeE
Confidence 999996
No 30
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.65 E-value=1e-07 Score=81.94 Aligned_cols=81 Identities=21% Similarity=0.219 Sum_probs=47.3
Q ss_pred eEEEEEeCCCCCCCC-C------HHHHHHHHHHHhhhcCccEEEEcCCccccCC-CCCCCcHHHHHH-hHhhhCCCCCCC
Q 029390 39 LSFLVVGDWGRRGAY-N------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDG-LTGVDDAAFFES-FVNIYTAPSLAK 109 (194)
Q Consensus 39 ~~f~~igD~g~~~~~-~------~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G-~~~~~d~~~~~~-~~~~~~~~~l~i 109 (194)
.||++++|+|..... + +....+.+-+.+.+.+||+|+++||++ +.. ........+... +.+.. .+.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlf-D~~~~~~~~~~~~~~~~l~~~L--~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTF-DVRKAITQNTMNFVREKIFDLL--KEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCccc-CCCCCCCHHHHHHHHHHHHHHH--HHCCC
Confidence 489999999963211 1 122222333345678999999999998 332 111111122222 12211 34579
Q ss_pred ceEEeccCcccCC
Q 029390 110 QWYNVLGNHDYRG 122 (194)
Q Consensus 110 P~~~v~GNHD~~~ 122 (194)
|++.++||||...
T Consensus 78 ~v~~I~GNHD~~~ 90 (340)
T PHA02546 78 TLHVLVGNHDMYY 90 (340)
T ss_pred eEEEEccCCCccc
Confidence 9999999999753
No 31
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.63 E-value=1.1e-07 Score=78.42 Aligned_cols=80 Identities=21% Similarity=0.304 Sum_probs=46.4
Q ss_pred eEEEEEeCCCCCCCC-C------HHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHH-HHHHhHhhhCCCCCC-C
Q 029390 39 LSFLVVGDWGRRGAY-N------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAA-FFESFVNIYTAPSLA-K 109 (194)
Q Consensus 39 ~~f~~igD~g~~~~~-~------~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~-~~~~~~~~~~~~~l~-i 109 (194)
.||++++|||..... . +....+.+.+.+.+.+||+++++||++ +....+....+ +.+.+.++ .... +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~-d~~~p~~~~~~~~~~~l~~l---~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVF-DTANPPAEAQELFNAFFRNL---SDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccC-CCCCCCHHHHHHHHHHHHHH---HhcCCc
Confidence 489999999963211 1 111222333444567899999999999 43322111111 11222221 2334 8
Q ss_pred ceEEeccCcccCC
Q 029390 110 QWYNVLGNHDYRG 122 (194)
Q Consensus 110 P~~~v~GNHD~~~ 122 (194)
|++.++||||...
T Consensus 77 ~v~~i~GNHD~~~ 89 (253)
T TIGR00619 77 PIVVISGNHDSAQ 89 (253)
T ss_pred eEEEEccCCCChh
Confidence 9999999999864
No 32
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.61 E-value=1.1e-07 Score=83.07 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=49.2
Q ss_pred eEEEEEeCCCCC-CCC-CH---HHHHHHH---HHHhhhcCccEEEEcCCccccCCCCCCCcH-HHHHHhHhhhCCCCCCC
Q 029390 39 LSFLVVGDWGRR-GAY-NQ---TKVAHQM---GIVGEKLKIDFIISTGDNFYDDGLTGVDDA-AFFESFVNIYTAPSLAK 109 (194)
Q Consensus 39 ~~f~~igD~g~~-~~~-~~---~~v~~~~---~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~-~~~~~~~~~~~~~~l~i 109 (194)
.||++++|||.. ... .+ ++..+++ -+.+.+.++||||+.||++ +....+.... ++.+.+.+ ....++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlF-d~~~Ps~~a~~~~~~~l~~---l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLF-DTNNPSPRALKLFLEALRR---LKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccc-cCCCCCHHHHHHHHHHHHH---hccCCC
Confidence 489999999963 111 11 2222222 2345567999999999999 4333321111 12222322 245789
Q ss_pred ceEEeccCcccCCC
Q 029390 110 QWYNVLGNHDYRGD 123 (194)
Q Consensus 110 P~~~v~GNHD~~~~ 123 (194)
|+|+++||||....
T Consensus 77 pv~~I~GNHD~~~~ 90 (390)
T COG0420 77 PVVVIAGNHDSPSR 90 (390)
T ss_pred cEEEecCCCCchhc
Confidence 99999999998753
No 33
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.61 E-value=1.3e-07 Score=75.00 Aligned_cols=57 Identities=23% Similarity=0.494 Sum_probs=40.8
Q ss_pred HHhhhcCccEEEEcCCccccCCCCCCCcHHHHH---HhHhhhCCCCCCCceEEeccCcccCCC
Q 029390 64 IVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFE---SFVNIYTAPSLAKQWYNVLGNHDYRGD 123 (194)
Q Consensus 64 ~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~---~~~~~~~~~~l~iP~~~v~GNHD~~~~ 123 (194)
...+..+||+|+++||++ +.|... .+.+|.+ .|.+++.. ...+|++.+|||||.++.
T Consensus 36 ~a~~~l~PD~Vi~lGDL~-D~G~~~-~~~e~~e~l~Rf~~If~~-~~~~~~~~VpGNHDIG~~ 95 (195)
T cd08166 36 LALNFVQPDIVIFLGDLM-DEGSIA-NDDEYYSYVQRFINIFEV-PNGTKIIYLPGDNDIGGE 95 (195)
T ss_pred HHHhccCCCEEEEecccc-CCCCCC-CHHHHHHHHHHHHHHhcC-CCCCcEEEECCCCCcCCC
Confidence 334567999999999999 566543 3455665 35555432 447999999999999864
No 34
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.59 E-value=1.8e-07 Score=82.32 Aligned_cols=81 Identities=21% Similarity=0.260 Sum_probs=48.4
Q ss_pred eEEEEEeCCCCCCCC-C------HHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhh-CCCCCCCc
Q 029390 39 LSFLVVGDWGRRGAY-N------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIY-TAPSLAKQ 110 (194)
Q Consensus 39 ~~f~~igD~g~~~~~-~------~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~-~~~~l~iP 110 (194)
.||++++|||..... + +....+.+.+.+.+.+||+||++||++ +.+... ......+.+.+ .....++|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDif-D~~~p~---~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIF-DTGSPP---SYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccc-cCCCCc---HHHHHHHHHHHHHHHhcCCc
Confidence 489999999963211 1 112223344445568999999999998 443321 11111222211 11345789
Q ss_pred eEEeccCcccCCC
Q 029390 111 WYNVLGNHDYRGD 123 (194)
Q Consensus 111 ~~~v~GNHD~~~~ 123 (194)
++.++||||....
T Consensus 77 v~~I~GNHD~~~~ 89 (407)
T PRK10966 77 LVVLAGNHDSVAT 89 (407)
T ss_pred EEEEcCCCCChhh
Confidence 9999999998653
No 35
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.58 E-value=1.8e-07 Score=71.85 Aligned_cols=59 Identities=22% Similarity=0.235 Sum_probs=38.0
Q ss_pred HHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHH---HhHhhhCCCCCCCceEEeccCcccCC
Q 029390 61 QMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFE---SFVNIYTAPSLAKQWYNVLGNHDYRG 122 (194)
Q Consensus 61 ~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~---~~~~~~~~~~l~iP~~~v~GNHD~~~ 122 (194)
.+.++.++.+||+++++||++. .+.. ..+..|.+ .|.+.+. ....+|++.++||||...
T Consensus 29 ~~~~~i~~~~pd~vv~~GDl~~-~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 29 SFQTSLWLLQPDVVFVLGDLFD-EGKW-STDEEWEDYVERFKKMFG-HPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred HHHHHHHhcCCCEEEECCCCCC-CCcc-CCHHHHHHHHHHHHHHhc-cCCCCeEEEEcCCCCcCC
Confidence 4455566789999999999994 3322 12233433 3433321 123689999999999975
No 36
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.47 E-value=6.7e-07 Score=78.51 Aligned_cols=46 Identities=22% Similarity=0.282 Sum_probs=30.8
Q ss_pred CCeEEEEEeCCCCCCCC-C-------HHHHHHHHHHHhhhcCccEEEEcCCcccc
Q 029390 37 GSLSFLVVGDWGRRGAY-N-------QTKVAHQMGIVGEKLKIDFIISTGDNFYD 83 (194)
Q Consensus 37 ~~~~f~~igD~g~~~~~-~-------~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~ 83 (194)
+.+||++++|+|. +.. . +....+.+-+.+.+.++|+||++||++..
T Consensus 2 ~~mKIlh~SD~Hl-G~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 2 DTIRILVSTDNHV-GYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred CceEEEEEcCCCC-CCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 5689999999996 321 1 11122233344557799999999999943
No 37
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.44 E-value=7.2e-07 Score=67.11 Aligned_cols=91 Identities=21% Similarity=0.337 Sum_probs=50.0
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
.|++++||+|. +.....+.++.+ .+||+|+++||++- ..++.+.+.. + |++.++|||
T Consensus 1 Mki~~~sD~H~----~~~~~~~~~~~~---~~~d~vi~~GDi~~--------~~~~~~~~~~------~--~~~~v~GNH 57 (156)
T PF12850_consen 1 MKIAVISDLHG----NLDALEAVLEYI---NEPDFVIILGDIFD--------PEEVLELLRD------I--PVYVVRGNH 57 (156)
T ss_dssp EEEEEEE--TT----THHHHHHHHHHH---TTESEEEEES-SCS--------HHHHHHHHHH------H--EEEEE--CC
T ss_pred CEEEEEeCCCC----ChhHHHHHHHHh---cCCCEEEECCCchh--------HHHHHHHHhc------C--CEEEEeCCc
Confidence 48999999996 333444455444 46999999999982 2333333322 2 899999999
Q ss_pred ccCCCcccccccccccCCCcceeeeeEEEeCCeEEEEEEcCcc
Q 029390 119 DYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTP 161 (194)
Q Consensus 119 D~~~~~~~~~~~~~~~~~~~~~~p~~ysf~~g~v~fI~lDT~~ 161 (194)
|... ..... .... .+..+.++.++.++++++...
T Consensus 58 D~~~-~~~~~-------~~~~-~~~~~~~~~~~~~i~~~H~~~ 91 (156)
T PF12850_consen 58 DNWA-FPNEN-------DEEY-LLDALRLTIDGFKILLSHGHP 91 (156)
T ss_dssp HSTH-HHSEE-------CTCS-SHSEEEEEETTEEEEEESSTS
T ss_pred cccc-chhhh-------hccc-cccceeeeecCCeEEEECCCC
Confidence 9643 11100 0000 233455566677777777754
No 38
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.43 E-value=9.5e-07 Score=71.74 Aligned_cols=72 Identities=13% Similarity=0.101 Sum_probs=46.0
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccC
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
.-|+++++|+|. +...+.+.+ +.+++.++|+|+++||++.. |. .++....+.+. ...+.+|++.++||
T Consensus 4 ~~kIl~iSDiHg----n~~~le~l~-~~~~~~~~D~vv~~GDl~~~-g~----~~~~~~~~l~~--l~~l~~pv~~V~GN 71 (224)
T cd07388 4 VRYVLATSNPKG----DLEALEKLV-GLAPETGADAIVLIGNLLPK-AA----KSEDYAAFFRI--LGEAHLPTFYVPGP 71 (224)
T ss_pred eeEEEEEEecCC----CHHHHHHHH-HHHhhcCCCEEEECCCCCCC-CC----CHHHHHHHHHH--HHhcCCceEEEcCC
Confidence 468999999994 223333333 34455689999999999942 21 12211222221 13567899999999
Q ss_pred cccC
Q 029390 118 HDYR 121 (194)
Q Consensus 118 HD~~ 121 (194)
||..
T Consensus 72 hD~~ 75 (224)
T cd07388 72 QDAP 75 (224)
T ss_pred CChH
Confidence 9974
No 39
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.35 E-value=1.3e-06 Score=71.50 Aligned_cols=65 Identities=25% Similarity=0.284 Sum_probs=42.1
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
+|++++||+|. .. ... .+ +..++.+||+|+++||+. +. ..+..+.+ ..+..|++.++|||
T Consensus 1 ~rIa~isDiHg-~~-~~~----~~-~~l~~~~pD~Vl~~GDi~-~~------~~~~~~~l------~~l~~p~~~V~GNH 60 (238)
T cd07397 1 LRIAIVGDVHG-QW-DLE----DI-KALHLLQPDLVLFVGDFG-NE------SVQLVRAI------SSLPLPKAVILGNH 60 (238)
T ss_pred CEEEEEecCCC-Cc-hHH----HH-HHHhccCCCEEEECCCCC-cC------hHHHHHHH------HhCCCCeEEEcCCC
Confidence 58999999995 21 211 11 223456899999999997 11 12222221 24567999999999
Q ss_pred ccCCC
Q 029390 119 DYRGD 123 (194)
Q Consensus 119 D~~~~ 123 (194)
|+...
T Consensus 61 D~~~~ 65 (238)
T cd07397 61 DAWYD 65 (238)
T ss_pred ccccc
Confidence 98654
No 40
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.31 E-value=2e-06 Score=68.27 Aligned_cols=63 Identities=24% Similarity=0.339 Sum_probs=43.3
Q ss_pred HHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHH---hHhhhCCCCC----------------CCceEEeccCc
Q 029390 58 VAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFES---FVNIYTAPSL----------------AKQWYNVLGNH 118 (194)
Q Consensus 58 v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~---~~~~~~~~~l----------------~iP~~~v~GNH 118 (194)
+++....+....+||.|+++||++ +.+ ..+|.+|.+. |.+++-.... ++|++.++|||
T Consensus 32 L~~~~~~~~~~l~Pd~V~fLGDLf-d~~--w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNH 108 (193)
T cd08164 32 LGHIVSMMQFWLKPDAVVVLGDLF-SSQ--WIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNH 108 (193)
T ss_pred HHHHHHHHHHhcCCCEEEEecccc-CCC--cccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcc
Confidence 344455555568999999999999 554 3456777654 4454421111 48999999999
Q ss_pred ccCCC
Q 029390 119 DYRGD 123 (194)
Q Consensus 119 D~~~~ 123 (194)
|...+
T Consensus 109 DIG~~ 113 (193)
T cd08164 109 DVGYG 113 (193)
T ss_pred cCCCC
Confidence 99863
No 41
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.30 E-value=2.7e-06 Score=66.07 Aligned_cols=63 Identities=17% Similarity=0.058 Sum_probs=38.8
Q ss_pred HHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccCCC
Q 029390 57 KVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGD 123 (194)
Q Consensus 57 ~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~~ 123 (194)
+..+.+.++.++.+||.++++||+++..... .+....... .......++|++.++||||....
T Consensus 28 ~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~---~~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~~~ 90 (172)
T cd07391 28 DTLERLDRLIEEYGPERLIILGDLKHSFGGL---SRQEFEEVA-FLRLLAKDVDVILIRGNHDGGLP 90 (172)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccccccc---CHHHHHHHH-HHHhccCCCeEEEEcccCccchh
Confidence 3444555566678999999999999543221 111111111 11123457899999999998653
No 42
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.30 E-value=1.4e-06 Score=62.47 Aligned_cols=70 Identities=23% Similarity=0.158 Sum_probs=40.7
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCccc
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (194)
+++||+|.... ....... ....++.++++++++||+++..+.. . +. .+...........|++.++||||.
T Consensus 1 ~~~gD~h~~~~-~~~~~~~--~~~~~~~~~~~vi~~GD~~~~~~~~----~-~~-~~~~~~~~~~~~~~~~~~~GNHDi 70 (131)
T cd00838 1 AVISDIHGNLE-ALEAVLE--AALAAAEKPDFVLVLGDLVGDGPDP----E-EV-LAAALALLLLLGIPVYVVPGNHDI 70 (131)
T ss_pred CeeecccCCcc-chHHHHH--HHHhcccCCCEEEECCcccCCCCCc----h-HH-HHHHHHHhhcCCCCEEEeCCCceE
Confidence 46899986321 1111111 2233457899999999999644321 1 11 111011124578999999999994
No 43
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.30 E-value=1.9e-06 Score=70.10 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=41.9
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhh-cCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhC-CCCCCCceEEeccCcc
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEK-LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-APSLAKQWYNVLGNHD 119 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~-~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~-~~~l~iP~~~v~GNHD 119 (194)
++++|+|... .........++.+.+. .+||.|+++||++ +............+.+.+.+. ..+.++|+|.++||||
T Consensus 2 ~~iSDlHl~~-~~~~~~~~~l~~l~~~~~~~d~lii~GDi~-d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD 79 (231)
T TIGR01854 2 LFISDLHLSP-ERPDITALFLDFLREEARKADALYILGDLF-EAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRD 79 (231)
T ss_pred eEEEecCCCC-CChhHHHHHHHHHHhhhccCCEEEEcCcee-ccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 6899999632 2221222233333321 3799999999999 321100001111122222111 1234689999999999
Q ss_pred cCC
Q 029390 120 YRG 122 (194)
Q Consensus 120 ~~~ 122 (194)
...
T Consensus 80 ~~~ 82 (231)
T TIGR01854 80 FLI 82 (231)
T ss_pred hhh
Confidence 864
No 44
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.29 E-value=1.7e-06 Score=67.44 Aligned_cols=63 Identities=30% Similarity=0.386 Sum_probs=40.6
Q ss_pred HHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHH---HhHhhhCCCC---CCCceEEeccCcccCCC
Q 029390 59 AHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFE---SFVNIYTAPS---LAKQWYNVLGNHDYRGD 123 (194)
Q Consensus 59 ~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~---~~~~~~~~~~---l~iP~~~v~GNHD~~~~ 123 (194)
.+.+.++.++.+||+|+++||++. .+... ....|.+ .|.+++.... ..+|++.++||||....
T Consensus 34 ~~~~~~~i~~~~pd~vi~lGDl~d-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~~ 102 (171)
T cd07384 34 RRAFKTALQRLKPDVVLFLGDLFD-GGRIA-DSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGYG 102 (171)
T ss_pred HHHHHHHHHhcCCCEEEEeccccC-CcEeC-CHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCCC
Confidence 344555666789999999999993 43321 2233443 3444432222 26899999999999864
No 45
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.27 E-value=2.1e-05 Score=71.01 Aligned_cols=127 Identities=20% Similarity=0.283 Sum_probs=65.5
Q ss_pred HHHHHHHhhhcC-ccEEEEcCCccccCCCCCCCcHH-HHHHhHhhhC--CCCC-CCceEEeccCcccCC-Cc-c-----c
Q 029390 59 AHQMGIVGEKLK-IDFIISTGDNFYDDGLTGVDDAA-FFESFVNIYT--APSL-AKQWYNVLGNHDYRG-DV-E-----A 126 (194)
Q Consensus 59 ~~~~~~~~~~~~-pdfvl~~GD~~Y~~G~~~~~d~~-~~~~~~~~~~--~~~l-~iP~~~v~GNHD~~~-~~-~-----~ 126 (194)
..++..+++..+ +|+|+.+||+.-.. ......+ -.....++.. .+-+ ++|+|+++||||..- +. . .
T Consensus 198 es~L~~ike~~~~iD~I~wTGD~~~H~--~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~ 275 (577)
T KOG3770|consen 198 ESALDHIKENHKDIDYIIWTGDNVAHD--VWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPK 275 (577)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCccc--chhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcc
Confidence 345666666556 99999999999322 1111111 1111222111 0122 699999999999852 10 0 0
Q ss_pred cc--ccccccC---CCcceee---------eeEEEe-CCeEEEEEEcCcccccccccCCCCCcccccccCc-ch-HHHHH
Q 029390 127 QL--SPVLRDI---DSRWLCL---------RSFIVN-AEIAEFIFVDTTPFVNKYFTDPEDHVYDWSGIQP-RK-SYLAN 189 (194)
Q Consensus 127 ~~--~~~~~~~---~~~~~~p---------~~ysf~-~g~v~fI~lDT~~~~~~y~~~~~~~~~~~~~l~~-~Q-~WL~~ 189 (194)
.. ...|.+. ...|..+ .+|+.. .++.++|+|||.-....-+ --+....++ .| +|+..
T Consensus 276 ~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~------~L~~n~tdp~~~lqWf~~ 349 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNF------WLYANQTDPIDQLQWFVD 349 (577)
T ss_pred hhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccce------eeeecCCCchHHhhHHHH
Confidence 00 0001122 2334321 266533 4899999999986532211 011122233 35 99999
Q ss_pred Hhhc
Q 029390 190 LLKV 193 (194)
Q Consensus 190 dL~~ 193 (194)
+|.+
T Consensus 350 ~L~~ 353 (577)
T KOG3770|consen 350 QLQE 353 (577)
T ss_pred HHHH
Confidence 9863
No 46
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.26 E-value=4.4e-07 Score=69.73 Aligned_cols=68 Identities=16% Similarity=0.083 Sum_probs=40.3
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCccc
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (194)
|++++|+|. +....+. .+.+...+.++|+++++||++... . ...+.. +.. ......|++.++||||+
T Consensus 1 ~~~iSDlH~-~~~~~~~---~~~~~~~~~~~d~li~~GDi~~~~-~----~~~~~~-~~~---~~~~~~~v~~v~GNHD~ 67 (166)
T cd07404 1 IQYLSDLHL-EFEDNLA---DLLNFPIAPDADILVLAGDIGYLT-D----APRFAP-LLL---ALKGFEPVIYVPGNHEF 67 (166)
T ss_pred CceEccccc-cCccccc---cccccCCCCCCCEEEECCCCCCCc-c----hHHHHH-HHH---hhcCCccEEEeCCCcce
Confidence 478999996 3221111 111223456899999999999321 1 122221 111 12346899999999998
Q ss_pred C
Q 029390 121 R 121 (194)
Q Consensus 121 ~ 121 (194)
.
T Consensus 68 ~ 68 (166)
T cd07404 68 Y 68 (166)
T ss_pred E
Confidence 6
No 47
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.23 E-value=3.6e-06 Score=68.80 Aligned_cols=78 Identities=17% Similarity=0.132 Sum_probs=43.1
Q ss_pred EEEEEeCCCCCCCCCHH---HHHHHHHHHhhhcCccEEEEcCCcccc-CCCCCCCcHHHHHHhHhhh-CCCCCCCceEEe
Q 029390 40 SFLVVGDWGRRGAYNQT---KVAHQMGIVGEKLKIDFIISTGDNFYD-DGLTGVDDAAFFESFVNIY-TAPSLAKQWYNV 114 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~---~v~~~~~~~~~~~~pdfvl~~GD~~Y~-~G~~~~~d~~~~~~~~~~~-~~~~l~iP~~~v 114 (194)
++++++|+|... .... .+.+.+.. ...+||.|+++||++.. .|... ..+ +.....+.+ .....++|+|.+
T Consensus 2 ~i~~iSDlHl~~-~~~~~~~~~~~~l~~--~~~~~d~l~i~GDl~d~~~g~~~-~~~-~~~~~~~~l~~l~~~g~~v~~v 76 (241)
T PRK05340 2 PTLFISDLHLSP-ERPAITAAFLRFLRG--EARQADALYILGDLFEAWIGDDD-PSP-FAREIAAALKALSDSGVPCYFM 76 (241)
T ss_pred cEEEEeecCCCC-CChhHHHHHHHHHHh--hhccCCEEEEccceeccccccCc-CCH-HHHHHHHHHHHHHHcCCeEEEE
Confidence 689999999632 2221 22222321 23589999999999921 12111 111 222221211 112345899999
Q ss_pred ccCcccCC
Q 029390 115 LGNHDYRG 122 (194)
Q Consensus 115 ~GNHD~~~ 122 (194)
+||||...
T Consensus 77 ~GNHD~~~ 84 (241)
T PRK05340 77 HGNRDFLL 84 (241)
T ss_pred eCCCchhh
Confidence 99999754
No 48
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.22 E-value=3.1e-06 Score=62.95 Aligned_cols=64 Identities=25% Similarity=0.288 Sum_probs=38.7
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCc-eEEeccCc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQ-WYNVLGNH 118 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP-~~~v~GNH 118 (194)
|++++||+|.. . . . .+..++|+++++||++. .+. ..++ +.+.+.+ .++..| ++.++|||
T Consensus 1 ~i~~isD~H~~-~-~---------~-~~~~~~D~vi~~GD~~~-~~~----~~~~-~~~~~~l--~~~~~~~~~~v~GNH 60 (135)
T cd07379 1 RFVCISDTHSR-H-R---------T-ISIPDGDVLIHAGDLTE-RGT----LEEL-QKFLDWL--KSLPHPHKIVIAGNH 60 (135)
T ss_pred CEEEEeCCCCC-C-C---------c-CcCCCCCEEEECCCCCC-CCC----HHHH-HHHHHHH--HhCCCCeEEEEECCC
Confidence 47999999952 1 1 1 13358999999999983 221 1222 1222222 234444 57899999
Q ss_pred ccCCC
Q 029390 119 DYRGD 123 (194)
Q Consensus 119 D~~~~ 123 (194)
|+...
T Consensus 61 D~~~~ 65 (135)
T cd07379 61 DLTLD 65 (135)
T ss_pred CCcCC
Confidence 98643
No 49
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.19 E-value=5.9e-06 Score=63.06 Aligned_cols=62 Identities=23% Similarity=0.223 Sum_probs=39.1
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhc-CccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKL-KIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~-~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
|+++++|+|.. . . .. +.+.+..+.. ++|.|+++||++ + ....+.+. +++.|++.|+|||
T Consensus 2 ~i~viSD~H~~-~-~--~~-~~~~~~~~~~~~~d~ii~~GD~~------~---~~~~~~l~------~~~~~~~~V~GN~ 61 (158)
T TIGR00040 2 KILVISDTHGP-L-R--AT-ELPVELFNLESNVDLVIHAGDLT------S---PFVLKEFE------DLAAKVIAVRGNN 61 (158)
T ss_pred EEEEEecccCC-c-c--hh-HhHHHHHhhccCCCEEEEcCCCC------C---HHHHHHHH------HhCCceEEEccCC
Confidence 78999999952 1 1 11 1222222334 899999999987 1 22222221 3456899999999
Q ss_pred ccC
Q 029390 119 DYR 121 (194)
Q Consensus 119 D~~ 121 (194)
|..
T Consensus 62 D~~ 64 (158)
T TIGR00040 62 DGE 64 (158)
T ss_pred Cch
Confidence 975
No 50
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.15 E-value=5.6e-06 Score=69.53 Aligned_cols=81 Identities=22% Similarity=0.179 Sum_probs=49.2
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEe
Q 029390 35 PDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNV 114 (194)
Q Consensus 35 ~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v 114 (194)
...++++++++|+|.... . .+..+.+.++.+ ..||+|+.+||++.....+ ....+.+.... -....++|++
T Consensus 41 ~~~~~~iv~lSDlH~~~~-~-~~~~~~~~~i~~-~~~DlivltGD~~~~~~~~--~~~~~~~~L~~----L~~~~gv~av 111 (284)
T COG1408 41 SLQGLKIVQLSDLHSLPF-R-EEKLALLIAIAN-ELPDLIVLTGDYVDGDRPP--GVAALALFLAK----LKAPLGVFAV 111 (284)
T ss_pred ccCCeEEEEeehhhhchh-h-HHHHHHHHHHHh-cCCCEEEEEeeeecCCCCC--CHHHHHHHHHh----hhccCCEEEE
Confidence 456899999999996432 2 223333334433 4669999999999421111 12222222211 1234689999
Q ss_pred ccCcccCCCc
Q 029390 115 LGNHDYRGDV 124 (194)
Q Consensus 115 ~GNHD~~~~~ 124 (194)
.||||+....
T Consensus 112 ~GNHd~~~~~ 121 (284)
T COG1408 112 LGNHDYGVDR 121 (284)
T ss_pred eccccccccc
Confidence 9999998754
No 51
>PHA02239 putative protein phosphatase
Probab=98.14 E-value=7.1e-06 Score=67.11 Aligned_cols=71 Identities=23% Similarity=0.262 Sum_probs=43.6
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhc-CccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKL-KIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~-~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
+++++||+|. . -..+.+.++++.... +.|.++++||++ +.|..+ .+..+.+... .....+++.++|||
T Consensus 2 ~~~~IsDIHG-~---~~~l~~ll~~i~~~~~~~d~li~lGD~i-DrG~~s---~~v~~~l~~~---~~~~~~~~~l~GNH 70 (235)
T PHA02239 2 AIYVVPDIHG-E---YQKLLTIMDKINNERKPEETIVFLGDYV-DRGKRS---KDVVNYIFDL---MSNDDNVVTLLGNH 70 (235)
T ss_pred eEEEEECCCC-C---HHHHHHHHHHHhhcCCCCCEEEEecCcC-CCCCCh---HHHHHHHHHH---hhcCCCeEEEECCc
Confidence 6899999994 2 233455555553332 359999999999 666542 2222222221 11235799999999
Q ss_pred ccC
Q 029390 119 DYR 121 (194)
Q Consensus 119 D~~ 121 (194)
|..
T Consensus 71 E~~ 73 (235)
T PHA02239 71 DDE 73 (235)
T ss_pred HHH
Confidence 964
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=98.11 E-value=1.1e-05 Score=63.06 Aligned_cols=73 Identities=16% Similarity=0.162 Sum_probs=42.6
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcH--HHHHHhHhhhCCCCCCCceEEeccC
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDA--AFFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~--~~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
|++++||+|.. .....+.++ ..++.++|.++++||++. .|....... ...+..+.+ .+++.|++.++||
T Consensus 2 ri~viSD~Hg~----~~~~~~~l~-~~~~~~~d~ii~lGDi~~-~~~~~~~~~~~~~~~~~~~l---~~~~~~v~~V~GN 72 (182)
T PRK09453 2 KLMFASDTHGS----LPATEKALE-LFAQSGADWLVHLGDVLY-HGPRNPLPEGYAPKKVAELL---NAYADKIIAVRGN 72 (182)
T ss_pred eEEEEEeccCC----HHHHHHHHH-HHHhcCCCEEEEcccccc-cCcCCCCccccCHHHHHHHH---HhcCCceEEEccC
Confidence 78999999952 223333333 334568999999999983 222110000 011112111 2345789999999
Q ss_pred cccC
Q 029390 118 HDYR 121 (194)
Q Consensus 118 HD~~ 121 (194)
||..
T Consensus 73 hD~~ 76 (182)
T PRK09453 73 CDSE 76 (182)
T ss_pred Ccch
Confidence 9975
No 53
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=98.10 E-value=2.1e-05 Score=69.33 Aligned_cols=162 Identities=15% Similarity=0.213 Sum_probs=91.4
Q ss_pred CCccCCCCCCCCeEEEEEeCCCCCCCCCH--HHHHHHHHHHhhhcCccEEEEcCCccccCCCCCC--------C------
Q 029390 27 PWFEHPAKPDGSLSFLVVGDWGRRGAYNQ--TKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGV--------D------ 90 (194)
Q Consensus 27 ~~~~~~~~~~~~~~f~~igD~g~~~~~~~--~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~--------~------ 90 (194)
-|++|++.....++|+-+||....+ +.+ ...-+.|. +.+|||+||+||.||..|.... +
T Consensus 128 GrtrTapa~~~~i~~~~fa~ascQ~-~~~gy~~aY~~ma----~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~ 202 (522)
T COG3540 128 GRTRTAPAPGRAIRFVWFADASCQG-WEIGYMTAYKTMA----KEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQH 202 (522)
T ss_pred cccccCCCCCCcchhhhhhhccccc-cccchhHHHHHHH----hcCCCEEEEcCCeeeccCCcccccccccccccccCCC
Confidence 3889999999999999999988643 322 22222332 4579999999999998875510 0
Q ss_pred ---cHHHHHHhHhhhC---C-C-----CCCCceEEeccCcccCCCccc---ccccc-----------------cccCCCc
Q 029390 91 ---DAAFFESFVNIYT---A-P-----SLAKQWYNVLGNHDYRGDVEA---QLSPV-----------------LRDIDSR 138 (194)
Q Consensus 91 ---d~~~~~~~~~~~~---~-~-----~l~iP~~~v~GNHD~~~~~~~---~~~~~-----------------~~~~~~~ 138 (194)
...-.+.|...+. . . ....||++.-=.||..+|... +.+.. |+.+--|
T Consensus 203 ~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR 282 (522)
T COG3540 203 KSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMPIR 282 (522)
T ss_pred CCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCccc
Confidence 0000112322221 1 1 125899999999999876421 10110 1111111
Q ss_pred ce-ee----eeEEEeCCe-EEEEEEcCcccc-cccccCCC----C--CcccccccCcch-HHHHHHhhc
Q 029390 139 WL-CL----RSFIVNAEI-AEFIFVDTTPFV-NKYFTDPE----D--HVYDWSGIQPRK-SYLANLLKV 193 (194)
Q Consensus 139 ~~-~p----~~ysf~~g~-v~fI~lDT~~~~-~~y~~~~~----~--~~~~~~~l~~~Q-~WL~~dL~~ 193 (194)
.. .| .|-+|.+|+ +.|.+||+-.+. ++.-.++. + ....-.=+.++| +||++.|..
T Consensus 283 ~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~ 351 (522)
T COG3540 283 YSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA 351 (522)
T ss_pred cccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh
Confidence 11 12 266889886 789999997543 00000111 0 000111255678 999998853
No 54
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.08 E-value=9.1e-06 Score=61.56 Aligned_cols=60 Identities=23% Similarity=0.258 Sum_probs=38.8
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
|++++||+|.. .....+.++.+ .++|.++++||++. .+.. .. .....|++.|+||||
T Consensus 1 ~i~~isD~H~~----~~~~~~~~~~~---~~~d~ii~~GD~~~-~~~~----~~-----------~~~~~~~~~V~GNhD 57 (155)
T cd00841 1 KIGVISDTHGS----LELLEKALELF---GDVDLIIHAGDVLY-PGPL----NE-----------LELKAPVIAVRGNCD 57 (155)
T ss_pred CEEEEecCCCC----HHHHHHHHHHh---cCCCEEEECCcccc-cccc----ch-----------hhcCCcEEEEeCCCC
Confidence 57899999952 22233344332 23999999999983 2211 10 123468999999999
Q ss_pred cCC
Q 029390 120 YRG 122 (194)
Q Consensus 120 ~~~ 122 (194)
...
T Consensus 58 ~~~ 60 (155)
T cd00841 58 GEV 60 (155)
T ss_pred CcC
Confidence 864
No 55
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.06 E-value=3.3e-05 Score=60.47 Aligned_cols=66 Identities=18% Similarity=0.190 Sum_probs=42.0
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
++++++|+|... ....+.+.+.++.++.++|.|+++||++. .+..+.++ .++.|++.|.||||
T Consensus 1 ~i~viSDtHl~~--~~~~~~~~~~~~~~~~~~d~iih~GDi~~---------~~~~~~l~------~~~~~~~~V~GN~D 63 (178)
T cd07394 1 LVLVIGDLHIPH--RASDLPAKFKKLLVPGKIQHVLCTGNLCS---------KETYDYLK------TIAPDVHIVRGDFD 63 (178)
T ss_pred CEEEEEecCCCC--CchhhHHHHHHHhccCCCCEEEECCCCCC---------HHHHHHHH------hhCCceEEEECCCC
Confidence 478999999532 12233444445444467999999999982 22222222 23457999999999
Q ss_pred cCC
Q 029390 120 YRG 122 (194)
Q Consensus 120 ~~~ 122 (194)
+..
T Consensus 64 ~~~ 66 (178)
T cd07394 64 ENL 66 (178)
T ss_pred ccc
Confidence 763
No 56
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=98.02 E-value=1.7e-05 Score=66.37 Aligned_cols=68 Identities=21% Similarity=0.233 Sum_probs=43.4
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
+.+++||+|. .-..+.+.++++.-..++|.++++||++ +.|..+ .+ ..+.+. +++.+++.++||||
T Consensus 2 ~~~vIGDIHG----~~~~l~~ll~~~~~~~~~D~li~lGDlV-drGp~s---~~---vl~~l~---~l~~~~~~VlGNHD 67 (275)
T PRK00166 2 ATYAIGDIQG----CYDELQRLLEKIDFDPAKDTLWLVGDLV-NRGPDS---LE---VLRFVK---SLGDSAVTVLGNHD 67 (275)
T ss_pred cEEEEEccCC----CHHHHHHHHHhcCCCCCCCEEEEeCCcc-CCCcCH---HH---HHHHHH---hcCCCeEEEecChh
Confidence 5789999995 2234444555542223679999999999 555432 22 222222 23557899999999
Q ss_pred cC
Q 029390 120 YR 121 (194)
Q Consensus 120 ~~ 121 (194)
..
T Consensus 68 ~~ 69 (275)
T PRK00166 68 LH 69 (275)
T ss_pred HH
Confidence 73
No 57
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.93 E-value=3.3e-05 Score=62.82 Aligned_cols=76 Identities=14% Similarity=0.049 Sum_probs=45.2
Q ss_pred eEEEEEeCCCCCCCC------------CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCC
Q 029390 39 LSFLVVGDWGRRGAY------------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPS 106 (194)
Q Consensus 39 ~~f~~igD~g~~~~~------------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~ 106 (194)
-+.++++|+|..... ...++.+.+.++.++.+||.++++||+++..... ..+. .+.+.+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~----~~~~-~~~~~l--~~ 87 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKG----LEWR-FIREFI--EV 87 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCCh----HHHH-HHHHHH--Hh
Confidence 457899999962100 0112333344445567899999999999644321 1121 122211 23
Q ss_pred CCCceEEeccCcccC
Q 029390 107 LAKQWYNVLGNHDYR 121 (194)
Q Consensus 107 l~iP~~~v~GNHD~~ 121 (194)
+..|++.++||||-.
T Consensus 88 ~~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 88 TFRDLILIRGNHDAL 102 (225)
T ss_pred cCCcEEEECCCCCCc
Confidence 456999999999974
No 58
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.93 E-value=5.4e-05 Score=68.45 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=48.8
Q ss_pred CCCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhh---------hcCccEEEEcCCccccCCCCCCCc-----HHHH---
Q 029390 33 AKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGE---------KLKIDFIISTGDNFYDDGLTGVDD-----AAFF--- 95 (194)
Q Consensus 33 ~~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~---------~~~pdfvl~~GD~~Y~~G~~~~~d-----~~~~--- 95 (194)
+....+.++++++|+|...........+.+.++.. ..+++.++++||++-..|....++ ....
T Consensus 238 ~~~~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~ 317 (504)
T PRK04036 238 PTKDEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQY 317 (504)
T ss_pred CcCCCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHH
Confidence 34566799999999996321111121223323222 457999999999993222110000 1111
Q ss_pred HHhHhhhCCCCCCCceEEeccCcccCC
Q 029390 96 ESFVNIYTAPSLAKQWYNVLGNHDYRG 122 (194)
Q Consensus 96 ~~~~~~~~~~~l~iP~~~v~GNHD~~~ 122 (194)
+.+...+..-.-.+|++.+|||||...
T Consensus 318 ~~l~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 318 EAAAEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHHHHHhhhcCCeEEEecCCCcchh
Confidence 122222211122589999999999864
No 59
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=97.89 E-value=5.3e-05 Score=61.00 Aligned_cols=115 Identities=17% Similarity=0.254 Sum_probs=67.2
Q ss_pred hhcCccEEEEcCCccccCCCCC-----------------CCcHHHHHHhHhhhCCC-----CCCCceEEeccCcccCCCc
Q 029390 67 EKLKIDFIISTGDNFYDDGLTG-----------------VDDAAFFESFVNIYTAP-----SLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 67 ~~~~pdfvl~~GD~~Y~~G~~~-----------------~~d~~~~~~~~~~~~~~-----~l~iP~~~v~GNHD~~~~~ 124 (194)
.+.+||++|++||.+|.++... .....+.+.+....... ..++|++.+.-+||+..+.
T Consensus 26 ~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~ 105 (228)
T cd07389 26 SEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNW 105 (228)
T ss_pred cccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccc
Confidence 4679999999999999886421 11122333343332211 1268999999999998653
Q ss_pred ccc--------cc----------c-ccccC---CCc--ceeeeeEEEeCCeE-EEEEEcCcccccccccCCCCCcccccc
Q 029390 125 EAQ--------LS----------P-VLRDI---DSR--WLCLRSFIVNAEIA-EFIFVDTTPFVNKYFTDPEDHVYDWSG 179 (194)
Q Consensus 125 ~~~--------~~----------~-~~~~~---~~~--~~~p~~ysf~~g~v-~fI~lDT~~~~~~y~~~~~~~~~~~~~ 179 (194)
... .. + .|... ..+ .....|+++..|.. .||+|||-... ..|.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R-----------d~W~~ 174 (228)
T cd07389 106 GGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR-----------DSWDG 174 (228)
T ss_pred ccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc-----------ccccc
Confidence 210 00 0 01000 000 11124788999986 99999996532 24777
Q ss_pred cCcchHHHHHHhh
Q 029390 180 IQPRKSYLANLLK 192 (194)
Q Consensus 180 l~~~Q~WL~~dL~ 192 (194)
+..++++|.+.|+
T Consensus 175 ~~~er~~l~~~~~ 187 (228)
T cd07389 175 YPAERERLLDLLA 187 (228)
T ss_pred cHHHHHHHHHHHH
Confidence 7766666655543
No 60
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.86 E-value=4.6e-05 Score=60.87 Aligned_cols=66 Identities=26% Similarity=0.312 Sum_probs=40.7
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
|++++||+|. +-..+.+.+..+....++|.++++||++ +.|..+ .+.++.+. . .+++.+.||||
T Consensus 2 ri~~isDiHg----~~~~l~~~l~~~~~~~~~d~~~~~GD~v-~~g~~~------~~~~~~l~---~--~~~~~v~GNhe 65 (207)
T cd07424 2 RDFVVGDIHG----HYSLLQKALDAVGFDPARDRLISVGDLI-DRGPES------LACLELLL---E--PWFHAVRGNHE 65 (207)
T ss_pred CEEEEECCCC----CHHHHHHHHHHcCCCCCCCEEEEeCCcc-cCCCCH------HHHHHHHh---c--CCEEEeECCCh
Confidence 5899999994 2233334444332223689999999999 444321 12233221 1 36899999999
Q ss_pred cC
Q 029390 120 YR 121 (194)
Q Consensus 120 ~~ 121 (194)
..
T Consensus 66 ~~ 67 (207)
T cd07424 66 QM 67 (207)
T ss_pred HH
Confidence 64
No 61
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.84 E-value=4.2e-05 Score=61.69 Aligned_cols=65 Identities=22% Similarity=0.214 Sum_probs=41.2
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
|++++||+|. .-..+.+.++++....+.|-++++||++ +-|..+ .+ ..+.+.. ..++.+.||||
T Consensus 18 ri~vigDIHG----~~~~L~~lL~~i~~~~~~D~li~lGDlv-DrGp~s---~~---vl~~l~~-----~~~~~v~GNHE 81 (218)
T PRK11439 18 HIWLVGDIHG----CFEQLMRKLRHCRFDPWRDLLISVGDLI-DRGPQS---LR---CLQLLEE-----HWVRAVRGNHE 81 (218)
T ss_pred eEEEEEcccC----CHHHHHHHHHhcCCCcccCEEEEcCccc-CCCcCH---HH---HHHHHHc-----CCceEeeCchH
Confidence 8999999995 2334555555543223578999999999 666542 22 2222211 23678999999
Q ss_pred c
Q 029390 120 Y 120 (194)
Q Consensus 120 ~ 120 (194)
.
T Consensus 82 ~ 82 (218)
T PRK11439 82 Q 82 (218)
T ss_pred H
Confidence 4
No 62
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.84 E-value=2.5e-05 Score=62.21 Aligned_cols=112 Identities=16% Similarity=0.101 Sum_probs=54.7
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhh---hcCccEEEEcCCccccC--CCCCCCcHHHHHHhHhhhCCCCCCCceEEecc
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGE---KLKIDFIISTGDNFYDD--GLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~---~~~pdfvl~~GD~~Y~~--G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~G 116 (194)
++++|+|....... .......... +.+|+.++++||++ +. +..........+...........+++++.++|
T Consensus 1 ~~iSDlHlg~~~~~--~~~~~~~~~~~~~~~~~~~lvl~GDi~-d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~G 77 (217)
T cd07398 1 LFISDLHLGDGGPA--ADFLLLFLLAALALGEADALYLLGDIF-DLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPG 77 (217)
T ss_pred CEeeeecCCCCCCC--HHHHHHHHHhhhccCCCCEEEEeccEE-EEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECC
Confidence 47899996321111 1122222222 25899999999999 32 11110111111111121111245789999999
Q ss_pred CcccCCCcccccccccccCCCcceeeeeE-EEeCCeEEEEEEcCccc
Q 029390 117 NHDYRGDVEAQLSPVLRDIDSRWLCLRSF-IVNAEIAEFIFVDTTPF 162 (194)
Q Consensus 117 NHD~~~~~~~~~~~~~~~~~~~~~~p~~y-sf~~g~v~fI~lDT~~~ 162 (194)
|||.......... ..... .+... .+..++.++++.-...+
T Consensus 78 NHD~~~~~~~~~~-----~~~~~-~~~~~~~~~~~g~~~~~~HG~~~ 118 (217)
T cd07398 78 NHDFLLGDFFAEE-----LGLIL-LPDPLVHLELDGKRILLEHGDQF 118 (217)
T ss_pred CchHHHHhHHHHH-----cCCEE-eccceEEEeeCCeEEEEECCCcC
Confidence 9998643211000 00011 11122 45667788888776543
No 63
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.79 E-value=7.2e-05 Score=61.99 Aligned_cols=66 Identities=23% Similarity=0.268 Sum_probs=42.1
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccC
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (194)
++|||+|. .-..+.+.++++..+.+.|.++++||++ +.|..+ . +..+.++ +++..+..++||||..
T Consensus 2 yvIGDIHG----~~~~L~~LL~~i~~~~~~D~Li~lGDlV-dRGp~s---~---evl~~l~---~l~~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQG----CYDELQRLLEKINFDPAKDRLWLVGDLV-NRGPDS---L---ETLRFVK---SLGDSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCC----CHHHHHHHHHhcCCCCCCCEEEEecCcC-CCCcCH---H---HHHHHHH---hcCCCeEEEcCCchHH
Confidence 68999995 2334445555543233579999999999 556542 2 2222222 2335788999999974
No 64
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.78 E-value=7.9e-05 Score=60.92 Aligned_cols=81 Identities=12% Similarity=0.073 Sum_probs=40.8
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhh-----cCccEEEEcCCccccCCCCCCCc--------HHHHHHhHhhhCCCCCC
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEK-----LKIDFIISTGDNFYDDGLTGVDD--------AAFFESFVNIYTAPSLA 108 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~-----~~pdfvl~~GD~~Y~~G~~~~~d--------~~~~~~~~~~~~~~~l~ 108 (194)
++++|+|...........+.+.++.+. .++|.++++||++-........+ .+..+.+.+.+..-.-+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 689999963211111222233332222 25799999999993211000000 01112233322211125
Q ss_pred CceEEeccCcccCC
Q 029390 109 KQWYNVLGNHDYRG 122 (194)
Q Consensus 109 iP~~~v~GNHD~~~ 122 (194)
+|++.++||||...
T Consensus 82 ~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 IKIIIIPGNHDAVR 95 (243)
T ss_pred CeEEEeCCCCCccc
Confidence 89999999999864
No 65
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.75 E-value=4.4e-05 Score=61.24 Aligned_cols=72 Identities=18% Similarity=0.210 Sum_probs=42.3
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhh-------hcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhh-CCCCCCCceEE
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGE-------KLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIY-TAPSLAKQWYN 113 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~-------~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~-~~~~l~iP~~~ 113 (194)
+++||+|. +-..+.+.+.+..- ..+.|.++++||++ +.|..+ .+..+...+.. ...+.+.+++.
T Consensus 1 ~vi~DIHG----~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~v-drG~~~---~~vl~~l~~l~~~~~~~~~~v~~ 72 (208)
T cd07425 1 VAIGDLHG----DLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIF-DRGPDV---IEILWLLYKLEQEAAKAGGKVHF 72 (208)
T ss_pred CEEeCccC----CHHHHHHHHHHCCCCCccccccCCCcEEEEECCCc-CCCcCH---HHHHHHHHHHHHHHHhcCCeEEE
Confidence 47999995 22334444433210 23679999999999 565432 22222222221 11234578999
Q ss_pred eccCcccC
Q 029390 114 VLGNHDYR 121 (194)
Q Consensus 114 v~GNHD~~ 121 (194)
++||||..
T Consensus 73 l~GNHE~~ 80 (208)
T cd07425 73 LLGNHELM 80 (208)
T ss_pred eeCCCcHH
Confidence 99999975
No 66
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.72 E-value=6.4e-05 Score=60.81 Aligned_cols=74 Identities=16% Similarity=0.197 Sum_probs=38.5
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHH----------------------
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFF---------------------- 95 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~---------------------- 95 (194)
.-++++++|++. +-+....+.+++.+.+||.++++||++ .+... ..+|.
T Consensus 5 ~~kilA~s~~~g-----~~e~l~~l~~~~~e~~~D~~v~~G~~~-~~~a~---~~e~~~a~~~~r~p~k~~i~~e~~~~~ 75 (255)
T PF14582_consen 5 VRKILAISNFRG-----DFELLERLVEVIPEKGPDAVVFVGDLL-KAEAR---SDEYERAQEEQREPDKSEINEEECYDS 75 (255)
T ss_dssp --EEEEEE--TT------HHHHHHHHHHHHHHT-SEEEEES-SS--TCHH---HHHHHHHHHTT----THHHHHHHHHHH
T ss_pred chhheeecCcch-----HHHHHHHHHhhccccCCCEEEEecccc-ccchh---hhHHHHHhhhccCcchhhhhhhhhhhH
Confidence 347899999663 333334444555667999999999998 32211 12343
Q ss_pred ---HHhHhhhCCCCCCCceEEeccCcccCC
Q 029390 96 ---ESFVNIYTAPSLAKQWYNVLGNHDYRG 122 (194)
Q Consensus 96 ---~~~~~~~~~~~l~iP~~~v~GNHD~~~ 122 (194)
..|.+. ...+++|++.+|||||-..
T Consensus 76 e~~~~ff~~--L~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 76 EALDKFFRI--LGELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HHHHHHHHH--HHCC-SEEEEE--TTS-SH
T ss_pred HHHHHHHHH--HHhcCCcEEEecCCCCchH
Confidence 022222 2468999999999999853
No 67
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.68 E-value=9.2e-05 Score=59.97 Aligned_cols=69 Identities=20% Similarity=0.283 Sum_probs=41.1
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhh-------cCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEE
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEK-------LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYN 113 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~-------~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~ 113 (194)
+.+|||+|. .-..+.+.++++..+ ...|.++++||++ +-|..+ .+..+...+. . -.-.+..
T Consensus 1 ~~vIGDIHG----~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~I-DRGp~S---~~vl~~l~~l---~-~~~~~~~ 68 (222)
T cd07413 1 YDFIGDIHG----HAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLI-DRGPEI---RELLEIVKSM---V-DAGHALA 68 (222)
T ss_pred CEEEEeccC----CHHHHHHHHHHcCCCccccccCCCCCEEEEeCccc-CCCCCH---HHHHHHHHHh---h-cCCCEEE
Confidence 468999995 223444555554221 1358999999999 666543 2222222221 1 1126888
Q ss_pred eccCcccC
Q 029390 114 VLGNHDYR 121 (194)
Q Consensus 114 v~GNHD~~ 121 (194)
+.||||..
T Consensus 69 l~GNHE~~ 76 (222)
T cd07413 69 VMGNHEFN 76 (222)
T ss_pred EEccCcHH
Confidence 99999964
No 68
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.67 E-value=0.00011 Score=60.27 Aligned_cols=69 Identities=20% Similarity=0.185 Sum_probs=41.3
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhh--------cCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCce
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEK--------LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQW 111 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~--------~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~ 111 (194)
|+.++||+|. .-..+.+.++++.-. .+.|.++++||++ +.|..+ .+..+...+. .....+
T Consensus 2 ~~~vIGDIHG----~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDli-DRGp~S---~~vl~~~~~~----~~~~~~ 69 (245)
T PRK13625 2 KYDIIGDIHG----CYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLT-DRGPHS---LRMIEIVWEL----VEKKAA 69 (245)
T ss_pred ceEEEEECcc----CHHHHHHHHHHcCCCcccCcccCCCCCEEEEECccc-CCCcCh---HHHHHHHHHH----hhCCCE
Confidence 6899999995 223344555543211 1247899999999 667543 2222222111 112469
Q ss_pred EEeccCccc
Q 029390 112 YNVLGNHDY 120 (194)
Q Consensus 112 ~~v~GNHD~ 120 (194)
+.+.||||.
T Consensus 70 ~~l~GNHE~ 78 (245)
T PRK13625 70 YYVPGNHCN 78 (245)
T ss_pred EEEeCccHH
Confidence 999999995
No 69
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.66 E-value=0.00014 Score=58.81 Aligned_cols=66 Identities=24% Similarity=0.313 Sum_probs=40.9
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
-|++++||+|. +-..+.+.++++.-..+.|.++++||++ +-|..+ . +.++.+.. -.++.+.|||
T Consensus 15 ~ri~visDiHg----~~~~l~~~l~~~~~~~~~d~l~~lGD~v-drG~~~---~---~~l~~l~~-----~~~~~v~GNH 78 (218)
T PRK09968 15 RHIWVVGDIHG----EYQLLQSRLHQLSFCPETDLLISVGDNI-DRGPES---L---NVLRLLNQ-----PWFISVKGNH 78 (218)
T ss_pred CeEEEEEeccC----CHHHHHHHHHhcCCCCCCCEEEECCCCc-CCCcCH---H---HHHHHHhh-----CCcEEEECch
Confidence 38999999995 2233444444432134679999999999 555432 1 22222211 2468999999
Q ss_pred cc
Q 029390 119 DY 120 (194)
Q Consensus 119 D~ 120 (194)
|.
T Consensus 79 E~ 80 (218)
T PRK09968 79 EA 80 (218)
T ss_pred HH
Confidence 96
No 70
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=97.60 E-value=0.00034 Score=57.01 Aligned_cols=82 Identities=18% Similarity=0.154 Sum_probs=52.8
Q ss_pred CCeEEEEEeCCCCCCCC-------------CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhC
Q 029390 37 GSLSFLVVGDWGRRGAY-------------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT 103 (194)
Q Consensus 37 ~~~~f~~igD~g~~~~~-------------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~ 103 (194)
..-+.++++|+|. +.. ....+...+.++.+..+|+-+|.+||+.++-+............|.+.+.
T Consensus 18 ~~~~~lVvADlHl-G~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~ 96 (235)
T COG1407 18 PLGRTLVVADLHL-GYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD 96 (235)
T ss_pred ccCcEEEEEeccc-chhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc
Confidence 3567899999996 320 11334445666777889999999999998765532222223333444322
Q ss_pred CCCCCCceEEeccCcccCCC
Q 029390 104 APSLAKQWYNVLGNHDYRGD 123 (194)
Q Consensus 104 ~~~l~iP~~~v~GNHD~~~~ 123 (194)
.. -|..+.||||-...
T Consensus 97 --~~--evi~i~GNHD~~i~ 112 (235)
T COG1407 97 --ER--EVIIIRGNHDNGIE 112 (235)
T ss_pred --cC--cEEEEeccCCCccc
Confidence 11 49999999998753
No 71
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.59 E-value=0.00015 Score=59.09 Aligned_cols=69 Identities=20% Similarity=0.242 Sum_probs=41.0
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhh---------cCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEK---------LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQ 110 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~---------~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP 110 (194)
+++++||+|. +-..+.+.++++.-. .+.|.++++||++ +.|..+ .+..+....+ . ....
T Consensus 2 ~i~vigDIHG----~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlI-DrG~~s---~evl~~l~~l---~-~~~~ 69 (234)
T cd07423 2 PFDIIGDVHG----CYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLV-DRGPDS---PEVLRLVMSM---V-AAGA 69 (234)
T ss_pred CeEEEEECCC----CHHHHHHHHHHcCCccccCccccCCCCCEEEEECCcc-CCCCCH---HHHHHHHHHH---h-hCCc
Confidence 6899999995 233444555554211 1358999999999 556542 2222222221 0 1235
Q ss_pred eEEeccCccc
Q 029390 111 WYNVLGNHDY 120 (194)
Q Consensus 111 ~~~v~GNHD~ 120 (194)
++.+.||||.
T Consensus 70 ~~~v~GNHE~ 79 (234)
T cd07423 70 ALCVPGNHDN 79 (234)
T ss_pred EEEEECCcHH
Confidence 7899999996
No 72
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.57 E-value=0.00027 Score=54.63 Aligned_cols=43 Identities=21% Similarity=0.190 Sum_probs=28.6
Q ss_pred cCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccCC
Q 029390 69 LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRG 122 (194)
Q Consensus 69 ~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~ 122 (194)
.++|.++++||++. .+.. ... .+.+ .+++.|++.++||||...
T Consensus 41 ~~~d~vi~~GDl~~-~~~~----~~~----~~~l--~~~~~~~~~v~GNHD~~~ 83 (168)
T cd07390 41 GPDDTVYHLGDFSF-GGKA----GTE----LELL--SRLNGRKHLIKGNHDSSL 83 (168)
T ss_pred CCCCEEEEeCCCCC-CCCh----HHH----HHHH--HhCCCCeEEEeCCCCchh
Confidence 36899999999994 3221 111 1111 245679999999999764
No 73
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=97.55 E-value=0.00029 Score=56.38 Aligned_cols=69 Identities=20% Similarity=0.237 Sum_probs=41.4
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccC
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (194)
+++||+|. .-..+.+.++++. ..++|.++++||++ +.|..+ .+........ .....+++.+.||||..
T Consensus 1 ~~igDiHg----~~~~l~~~l~~~~-~~~~d~li~lGD~v-drg~~~---~~~l~~l~~~---~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 1 YVIGDIHG----CLDDLLRLLEKIG-FPPNDKLIFLGDYV-DRGPDS---VEVIDLLLAL---KILPDNVILLRGNHEDM 68 (225)
T ss_pred CEEeCCCC----CHHHHHHHHHHhC-CCCCCEEEEECCEe-CCCCCc---HHHHHHHHHh---cCCCCcEEEEccCchhh
Confidence 47999994 2234444555443 34689999999999 555432 2222112111 11145899999999985
Q ss_pred C
Q 029390 122 G 122 (194)
Q Consensus 122 ~ 122 (194)
.
T Consensus 69 ~ 69 (225)
T cd00144 69 L 69 (225)
T ss_pred h
Confidence 3
No 74
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.55 E-value=0.00026 Score=59.69 Aligned_cols=73 Identities=18% Similarity=0.265 Sum_probs=40.7
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhh-----cCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEe
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEK-----LKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNV 114 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~-----~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v 114 (194)
+++++||+|. .-..+.+.++.+... ...+.++++||++ +.|..+ .+..+..... ....-...+..+
T Consensus 3 ~iyaIGDIHG----~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyV-DRGPdS---~eVld~L~~l-~~~~~~~~vv~L 73 (304)
T cd07421 3 VVICVGDIHG----YISKLNNLWLNLQSALGPSDFASALVIFLGDYC-DRGPET---RKVIDFLISL-PEKHPKQRHVFL 73 (304)
T ss_pred eEEEEEeccC----CHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcC-CCCCCH---HHHHHHHHHh-hhcccccceEEE
Confidence 6899999995 122333444443222 1356899999999 666542 2222222221 101111257899
Q ss_pred ccCcccC
Q 029390 115 LGNHDYR 121 (194)
Q Consensus 115 ~GNHD~~ 121 (194)
.||||..
T Consensus 74 rGNHE~~ 80 (304)
T cd07421 74 CGNHDFA 80 (304)
T ss_pred ecCChHH
Confidence 9999954
No 75
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=97.52 E-value=0.00028 Score=59.06 Aligned_cols=67 Identities=24% Similarity=0.222 Sum_probs=41.4
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
+.++|||+|. .-.++.+.++++.-+...|-++++||++ +.|..+ .+. ...+. +++..+..+.||||
T Consensus 2 ~~YvIGDIHG----c~daL~~LL~~i~f~~~~D~l~~lGDlV-dRGP~s---lev---L~~l~---~l~~~~~~VlGNHD 67 (279)
T TIGR00668 2 ATYLIGDLHG----CYDELQALLERVEFDPGQDTLWLTGDLV-ARGPGS---LEV---LRYVK---SLGDAVRLVLGNHD 67 (279)
T ss_pred cEEEEEcccC----CHHHHHHHHHHhCcCCCCCEEEEeCCcc-CCCCCH---HHH---HHHHH---hcCCCeEEEEChhH
Confidence 4689999995 2334555666553233568999999999 556543 222 22221 22234678999999
Q ss_pred c
Q 029390 120 Y 120 (194)
Q Consensus 120 ~ 120 (194)
.
T Consensus 68 ~ 68 (279)
T TIGR00668 68 L 68 (279)
T ss_pred H
Confidence 6
No 76
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.31 E-value=0.001 Score=55.28 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=56.2
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhh--hcCccEEEEcCCccccCCCCCCCcH---------HHHHHhHhhhCC-CCCC
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGE--KLKIDFIISTGDNFYDDGLTGVDDA---------AFFESFVNIYTA-PSLA 108 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~--~~~pdfvl~~GD~~Y~~G~~~~~d~---------~~~~~~~~~~~~-~~l~ 108 (194)
+++.||.|. .-..+.+.+..+.+ ..++|++|.+||+. ..+.. ++. +-...|...+.. ....
T Consensus 1 i~v~Gd~HG----~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~-~~~~~--~d~~~~~~p~k~~~~~~f~~~~~g~~~~p 73 (262)
T cd00844 1 IAVEGCCHG----ELDKIYETLEKIEKKEGTKVDLLICCGDFQ-AVRNE--ADLKCMAVPPKYRKMGDFYKYYSGEKKAP 73 (262)
T ss_pred CEEEecCCc----cHHHHHHHHHHHHHhcCCCCcEEEEcCCCC-CcCCc--chhhhhccchhhhhhhhHHHHhcCCccCC
Confidence 478999884 11223333333222 24699999999986 22111 111 011234444432 3467
Q ss_pred CceEEeccCcccCCCcccccccccccCCCcceeee------eEEEeCCeEEEEEEcCc
Q 029390 109 KQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLR------SFIVNAEIAEFIFVDTT 160 (194)
Q Consensus 109 iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~p~------~ysf~~g~v~fI~lDT~ 160 (194)
+|++.+.||||-.... .++. ..-|.+|. .-.+..++++|..|...
T Consensus 74 ~~t~fi~GNHE~~~~l-~~l~------~gg~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~ 124 (262)
T cd00844 74 ILTIFIGGNHEASNYL-WELP------YGGWVAPNIYYLGYAGVVNFGGLRIAGLSGI 124 (262)
T ss_pred eeEEEECCCCCCHHHH-Hhhc------CCCeecCcEEEecCCCEEEECCeEEEEeccc
Confidence 8899999999953221 1211 12233442 12244577888888664
No 77
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.26 E-value=0.00055 Score=50.69 Aligned_cols=58 Identities=29% Similarity=0.421 Sum_probs=34.2
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccC
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (194)
++++|+|. . . .....+.. ++.++|.++++||+. . . ....+.+. ...|++.++||||..
T Consensus 1 ~viSDtH~-~-~---~~~~~~~~--~~~~~d~ii~~GD~~--~-------~-~~~~~~~~-----~~~~~~~V~GN~D~~ 58 (129)
T cd07403 1 LVISDTES-P-A---LYSPEIKV--RLEGVDLILSAGDLP--K-------E-YLEYLVTM-----LNVPVYYVHGNHDVD 58 (129)
T ss_pred CeeccccC-c-c---ccchHHHh--hCCCCCEEEECCCCC--h-------H-HHHHHHHH-----cCCCEEEEeCCCccC
Confidence 47899983 2 1 11122211 246899999999974 1 1 11122221 356899999999953
No 78
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.08 E-value=0.0022 Score=51.77 Aligned_cols=74 Identities=18% Similarity=0.132 Sum_probs=45.9
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHH--hHhhhCCCCCCCceEEec
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFES--FVNIYTAPSLAKQWYNVL 115 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~--~~~~~~~~~l~iP~~~v~ 115 (194)
..|+++++|+|.. . ....++...+...++|+++..||+.|-.-.+. ..-.+. .+. .....+|++++|
T Consensus 3 ~mkil~vtDlHg~----~-~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~---~~~~~~~~~e~---l~~~~~~v~avp 71 (226)
T COG2129 3 KMKILAVTDLHGS----E-DSLKKLLNAAADIRADLLVIAGDLTYFHFGPK---EVAEELNKLEA---LKELGIPVLAVP 71 (226)
T ss_pred cceEEEEeccccc----h-HHHHHHHHHHhhccCCEEEEecceehhhcCch---HHHHhhhHHHH---HHhcCCeEEEEc
Confidence 5799999999952 1 12233334445568999999999994321111 111111 122 134689999999
Q ss_pred cCcccCC
Q 029390 116 GNHDYRG 122 (194)
Q Consensus 116 GNHD~~~ 122 (194)
||-|...
T Consensus 72 GNcD~~~ 78 (226)
T COG2129 72 GNCDPPE 78 (226)
T ss_pred CCCChHH
Confidence 9988753
No 79
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.06 E-value=0.0008 Score=54.77 Aligned_cols=75 Identities=19% Similarity=0.244 Sum_probs=40.2
Q ss_pred EEeCCCCCCCCCHHHHHHHHHHHhhhc--CccEEEEcCCccccCCCCCCC-cHHHHHH-hHhhhCCCCCCCceEEeccCc
Q 029390 43 VVGDWGRRGAYNQTKVAHQMGIVGEKL--KIDFIISTGDNFYDDGLTGVD-DAAFFES-FVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 43 ~igD~g~~~~~~~~~v~~~~~~~~~~~--~pdfvl~~GD~~Y~~G~~~~~-d~~~~~~-~~~~~~~~~l~iP~~~v~GNH 118 (194)
.|+|.|.... .....+.+.+..+.. +.|.+..+||++ + +-.+.+ -++..+. ...+.....-+.|+|.++|||
T Consensus 2 FISDlHL~~~--~p~~t~~fl~Fl~~~a~~ad~lyilGDif-d-~w~g~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPK--RPALTAFFLDFLREEAAQADALYILGDIF-D-GWIGDDEPPQLHRQVAQKLLRLARKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCC--CcHHHHHHHHHHHhccccCcEEEEechhh-h-hhhcCCcccHHHHHHHHHHHHHHhcCCeEEEecCch
Confidence 6899996422 223333333333332 459999999999 2 211111 1122222 112111234468999999999
Q ss_pred ccC
Q 029390 119 DYR 121 (194)
Q Consensus 119 D~~ 121 (194)
|.-
T Consensus 78 Dfl 80 (237)
T COG2908 78 DFL 80 (237)
T ss_pred HHH
Confidence 964
No 80
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=97.01 E-value=0.0027 Score=57.09 Aligned_cols=51 Identities=18% Similarity=0.250 Sum_probs=36.9
Q ss_pred CCCeEEEEEeCCCCCCCCC--------HHHHHHHHHHHhhhcCccEEEEcCCccccCCCC
Q 029390 36 DGSLSFLVVGDWGRRGAYN--------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLT 87 (194)
Q Consensus 36 ~~~~~f~~igD~g~~~~~~--------~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~ 87 (194)
.+.+|+++.+|.|. |+.. .-...+.+-.++++++.|+|+..||+++++-+.
T Consensus 11 entirILVaTD~Hl-GY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPS 69 (646)
T KOG2310|consen 11 ENTIRILVATDNHL-GYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPS 69 (646)
T ss_pred ccceEEEEeecCcc-ccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCcc
Confidence 67899999999995 5321 112223344567788999999999999987543
No 81
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.00 E-value=0.0032 Score=51.40 Aligned_cols=78 Identities=17% Similarity=0.200 Sum_probs=44.2
Q ss_pred eEEEEEeCCCCCCC------CCHHHHHHHHHHHhhhcCcc-EEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCce
Q 029390 39 LSFLVVGDWGRRGA------YNQTKVAHQMGIVGEKLKID-FIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQW 111 (194)
Q Consensus 39 ~~f~~igD~g~~~~------~~~~~v~~~~~~~~~~~~pd-fvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~ 111 (194)
+++++++|+|. .. .....+...++++.+ ..|+ +++..||++....... .... ....+.+ ..+ .+-
T Consensus 1 l~i~~~sD~hg-~~~~~~~~~g~~~l~~~v~~~~~-~~~~~l~v~~GD~~~~~~~~~--~~~~-~~~~~~l--~~~-g~d 72 (252)
T cd00845 1 LTILHTNDLHG-HFEPAGGVGGAARLATLIKEERA-ENENTLLLDAGDNFDGSPPST--ATKG-EANIELM--NAL-GYD 72 (252)
T ss_pred CEEEEeccccc-CccccCCcCCHHHHHHHHHHHHh-cCCCeEEEeCCccCCCccchh--ccCC-cHHHHHH--Hhc-CCC
Confidence 58999999994 22 233455666766644 3566 7899999984332210 0000 0111111 122 346
Q ss_pred EEeccCcccCCCc
Q 029390 112 YNVLGNHDYRGDV 124 (194)
Q Consensus 112 ~~v~GNHD~~~~~ 124 (194)
+.++||||+..+.
T Consensus 73 ~~~~GNHe~d~g~ 85 (252)
T cd00845 73 AVTIGNHEFDYGL 85 (252)
T ss_pred EEeeccccccccH
Confidence 6788999997653
No 82
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=96.96 E-value=0.0032 Score=49.10 Aligned_cols=65 Identities=22% Similarity=0.166 Sum_probs=41.9
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
.++++++|+|.+. .. .....+.....++|+|+++||...+. +. ..+.. .+..+++.|-||.
T Consensus 2 m~ilviSDtH~~~----~~-~~~~~~~~~~~~~d~vih~GD~~~~~------~~---~~l~~-----~~~~~i~~V~GN~ 62 (172)
T COG0622 2 MKILVISDTHGPL----RA-IEKALKIFNLEKVDAVIHAGDSTSPF------TL---DALEG-----GLAAKLIAVRGNC 62 (172)
T ss_pred cEEEEEeccCCCh----hh-hhHHHHHhhhcCCCEEEECCCcCCcc------ch---HHhhc-----ccccceEEEEccC
Confidence 4789999999632 11 12222333456999999999999422 11 11211 1467899999999
Q ss_pred ccCC
Q 029390 119 DYRG 122 (194)
Q Consensus 119 D~~~ 122 (194)
|...
T Consensus 63 D~~~ 66 (172)
T COG0622 63 DGEV 66 (172)
T ss_pred CCcc
Confidence 9974
No 83
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=96.89 E-value=0.0023 Score=54.70 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=41.2
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccCc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNH 118 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GNH 118 (194)
+++++||+|. + -.++.+.+.+.....+.+-.+++||.+ +.|..+. +.+..++... ...--++.+.|||
T Consensus 52 ~~~vvGDiHG-~---~~dL~~il~~~g~~~~~~~~lFLGDyV-DRG~~s~------Evl~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHG-K---LDDLFLIFYKNGLPSPENPYVFNGDFV-DRGKRSI------EILIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCC-C---HHHHHHHHHHcCCCCccceEEEecccc-CCCCCcH------HHHHHHHHHhhcCCCcEEEecCch
Confidence 6899999995 2 234445554321111226799999999 6665431 1222222211 1123489999999
Q ss_pred ccC
Q 029390 119 DYR 121 (194)
Q Consensus 119 D~~ 121 (194)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 985
No 84
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=96.72 E-value=0.015 Score=48.05 Aligned_cols=78 Identities=14% Similarity=0.176 Sum_probs=41.9
Q ss_pred eEEEEEeCCCCCCC------CCHHHHHHHHHHHhhhcCcc-EEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCce
Q 029390 39 LSFLVVGDWGRRGA------YNQTKVAHQMGIVGEKLKID-FIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQW 111 (194)
Q Consensus 39 ~~f~~igD~g~~~~------~~~~~v~~~~~~~~~~~~pd-fvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~ 111 (194)
++++.+.|+|.... -+-..++..++++.++ +|+ +++..||++-......... - +...+.+ ..++. -
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~-~~~~l~l~~GD~~~g~~~~~~~~--g-~~~~~~l--~~l~~-d 73 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE-NPNTLVLFSGDVLSPSLLSTATK--G-KQMVPVL--NALGV-D 73 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc-CCCEEEEECCCccCCccchhhcC--C-ccHHHHH--HhcCC-c
Confidence 47888899883110 0124556666665444 566 8999999983221110000 0 0111111 22333 4
Q ss_pred EEeccCcccCCC
Q 029390 112 YNVLGNHDYRGD 123 (194)
Q Consensus 112 ~~v~GNHD~~~~ 123 (194)
+.++||||+..+
T Consensus 74 ~~~~GNHefd~g 85 (257)
T cd07406 74 LACFGNHEFDFG 85 (257)
T ss_pred EEeecccccccC
Confidence 678999999765
No 85
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.68 E-value=0.0066 Score=50.04 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=43.2
Q ss_pred eEEEEEeCCCCCC------CCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceE
Q 029390 39 LSFLVVGDWGRRG------AYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWY 112 (194)
Q Consensus 39 ~~f~~igD~g~~~------~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~ 112 (194)
++++.++|+|..- ...-..++..++++.++ ++++++..||++-......... - +...+.+ ..++..+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~~gs~~~~~~~--g-~~~~~~l--n~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAIQGLPISDLDK--G-ETIIKIM--NAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcCCCchhhhhcC--C-cHHHHHH--HhcCCcE-
Confidence 4789999999421 11223455566665444 6789999999983211100000 0 0111111 2344445
Q ss_pred EeccCcccCCCc
Q 029390 113 NVLGNHDYRGDV 124 (194)
Q Consensus 113 ~v~GNHD~~~~~ 124 (194)
.++||||++.+.
T Consensus 74 ~~~GNHefd~G~ 85 (257)
T cd07408 74 VTPGNHEFDYGL 85 (257)
T ss_pred EccccccccCCH
Confidence 578999998653
No 86
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=96.62 E-value=0.0049 Score=53.78 Aligned_cols=71 Identities=27% Similarity=0.362 Sum_probs=40.8
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCc-cEEEEcCCccccCCCCCCCcHHHHHHhHhhhCC-CCCCCceEEecc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTA-PSLAKQWYNVLG 116 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~p-dfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~-~~l~iP~~~v~G 116 (194)
-++.++||+|. + -.++.+.+.+.. .... +..+++||++ +.|..+. +.+..++.. -...--++.+.|
T Consensus 66 ~~i~VvGDIHG-~---~~dL~~ll~~~g-~~~~~~~ylFLGDyV-DRGp~Sl------Evl~lL~~lki~~p~~v~lLRG 133 (377)
T cd07418 66 CEVVVVGDVHG-Q---LHDVLFLLEDAG-FPDQNRFYVFNGDYV-DRGAWGL------ETFLLLLSWKVLLPDRVYLLRG 133 (377)
T ss_pred CCEEEEEecCC-C---HHHHHHHHHHhC-CCCCCceEEEecccc-CCCCChH------HHHHHHHHHhhccCCeEEEEee
Confidence 46999999995 2 234444444322 1122 4599999999 6665431 222222111 112234899999
Q ss_pred CcccC
Q 029390 117 NHDYR 121 (194)
Q Consensus 117 NHD~~ 121 (194)
|||..
T Consensus 134 NHE~~ 138 (377)
T cd07418 134 NHESK 138 (377)
T ss_pred ecccc
Confidence 99985
No 87
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=96.59 E-value=0.01 Score=49.17 Aligned_cols=72 Identities=25% Similarity=0.443 Sum_probs=46.1
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
|++++||.= +......+++.+.++.++.++|+++..||++- .|. +. .+...+.+ ..+++- ..++|||+
T Consensus 1 ~ilfigdi~--g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~-gg~-gl-~~~~~~~L------~~~G~D-~iTlGNH~ 68 (255)
T cd07382 1 KILFIGDIV--GKPGRKAVKEHLPKLKKEYKIDFVIANGENAA-GGK-GI-TPKIAKEL------LSAGVD-VITMGNHT 68 (255)
T ss_pred CEEEEEeCC--CHHHHHHHHHHHHHHHHHCCCCEEEECCcccc-CCC-CC-CHHHHHHH------HhcCCC-EEEecccc
Confidence 578999962 33345667777888877788999999999983 332 11 12222222 234444 45559999
Q ss_pred cCCC
Q 029390 120 YRGD 123 (194)
Q Consensus 120 ~~~~ 123 (194)
|+..
T Consensus 69 fD~g 72 (255)
T cd07382 69 WDKK 72 (255)
T ss_pred cCcc
Confidence 9876
No 88
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.51 E-value=0.0096 Score=45.43 Aligned_cols=66 Identities=26% Similarity=0.338 Sum_probs=40.3
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHh-hhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhC-CCCCCCceEEeccCcc
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVG-EKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYT-APSLAKQWYNVLGNHD 119 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~-~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~-~~~l~iP~~~v~GNHD 119 (194)
+++||.+. .-..+.+.++++. ++.+.|++|.+||++-.. . ++ +.|...+. ..+..+|+|.+-|||+
T Consensus 1 LV~G~~~G----~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~-~---~~----~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNG----RLKALFEKVNTINKKKGPFDALLCVGDFFGDD-E---DD----EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCc----cHHHHHHHHHHHhcccCCeeEEEEecCccCCc-c---ch----hhHHHHhcCCccCCCCEEEECCCCC
Confidence 36788663 2234555555533 345779999999998211 1 11 22333332 2457899999999997
No 89
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=96.48 E-value=0.013 Score=48.94 Aligned_cols=72 Identities=22% Similarity=0.432 Sum_probs=47.3
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
|++++||+= +......+.+.+.++.++.++||++..||++ ..|. +. .+... +.+ .+.++-+..+ |||.
T Consensus 2 ~ilfiGDi~--G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~-~gG~-Gi-~~~~~---~~L---~~~GvDviT~-GNH~ 69 (266)
T TIGR00282 2 KFLFIGDVY--GKAGRKIVKNNLPQLKSKYQADLVIANGENT-THGK-GL-TLKIY---EFL---KQSGVNYITM-GNHT 69 (266)
T ss_pred eEEEEEecC--CHHHHHHHHHHHHHHHHhCCCCEEEEcCccc-CCCC-CC-CHHHH---HHH---HhcCCCEEEc-cchh
Confidence 789999963 3233456677788877788999999999998 3442 21 22222 222 2345556655 9999
Q ss_pred cCCC
Q 029390 120 YRGD 123 (194)
Q Consensus 120 ~~~~ 123 (194)
|+..
T Consensus 70 ~Dkg 73 (266)
T TIGR00282 70 WFQK 73 (266)
T ss_pred ccCc
Confidence 9865
No 90
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=96.43 E-value=0.0086 Score=50.01 Aligned_cols=71 Identities=18% Similarity=0.199 Sum_probs=42.2
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCC-CCCCCceEEeccC
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTA-PSLAKQWYNVLGN 117 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~-~~l~iP~~~v~GN 117 (194)
-+++++||+|. +-.++.+.+.+.. ....+-++++||++ +.|..+ . +.+..++.. ....--++.+.||
T Consensus 28 ~~i~vvGDiHG----~~~~l~~ll~~~~-~~~~~~~vfLGD~V-DrG~~s---~---e~l~~l~~lk~~~p~~v~llrGN 95 (271)
T smart00156 28 APVTVCGDIHG----QFDDLLRLFDLNG-PPPDTNYVFLGDYV-DRGPFS---I---EVILLLFALKILYPNRVVLLRGN 95 (271)
T ss_pred CCEEEEEeCcC----CHHHHHHHHHHcC-CCCCceEEEeCCcc-CCCCCh---H---HHHHHHHHHHhcCCCCEEEEecc
Confidence 46899999995 2334444554332 23457899999999 666543 1 222221111 1122358999999
Q ss_pred cccC
Q 029390 118 HDYR 121 (194)
Q Consensus 118 HD~~ 121 (194)
||..
T Consensus 96 HE~~ 99 (271)
T smart00156 96 HESR 99 (271)
T ss_pred ccHH
Confidence 9985
No 91
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=96.38 E-value=0.023 Score=52.01 Aligned_cols=84 Identities=11% Similarity=0.040 Sum_probs=44.7
Q ss_pred CCCCCCeEEEEEeCCCCCCC---C---CHHHHHHHHHHHhhh----cCccEEEEcCCccccCCCCCCCcHHHHH--HhHh
Q 029390 33 AKPDGSLSFLVVGDWGRRGA---Y---NQTKVAHQMGIVGEK----LKIDFIISTGDNFYDDGLTGVDDAAFFE--SFVN 100 (194)
Q Consensus 33 ~~~~~~~~f~~igD~g~~~~---~---~~~~v~~~~~~~~~~----~~pdfvl~~GD~~Y~~G~~~~~d~~~~~--~~~~ 100 (194)
+....+++++.++|+|..-. . .-..++..++++-++ .+..+++..||++-..... .+.. ..-+
T Consensus 29 ~~~~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s-----~~~~g~~~i~ 103 (551)
T PRK09558 29 KDKTYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES-----DLQDAEPDFR 103 (551)
T ss_pred cCCceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh-----hhcCCchhHH
Confidence 34567899999999995211 0 113344455544321 3446899999998321110 1100 0111
Q ss_pred hhCCCCCCCceEEeccCcccCCCc
Q 029390 101 IYTAPSLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 101 ~~~~~~l~iP~~~v~GNHD~~~~~ 124 (194)
.+ ..++. =..++||||++.+.
T Consensus 104 ~m--N~~g~-Da~tlGNHEFD~G~ 124 (551)
T PRK09558 104 GM--NLIGY-DAMAVGNHEFDNPL 124 (551)
T ss_pred HH--hcCCC-CEEcccccccCcCH
Confidence 11 22333 35567999998763
No 92
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=96.30 E-value=0.0086 Score=51.15 Aligned_cols=72 Identities=17% Similarity=0.188 Sum_probs=40.3
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccC
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGN 117 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GN 117 (194)
-++.++||+|. + -.++.+.+....-...-+-.+++||++ +.|..+ .+.+..++... ...--++.+.||
T Consensus 60 ~~~~VvGDIHG-~---~~dL~~ll~~~g~~~~~~~ylFLGDyV-DRG~~S------~Evl~ll~~lki~~p~~v~lLRGN 128 (316)
T cd07417 60 EKITVCGDTHG-Q---FYDLLNIFELNGLPSETNPYLFNGDFV-DRGSFS------VEVILTLFAFKLLYPNHFHLNRGN 128 (316)
T ss_pred ceeEEeecccC-C---HHHHHHHHHhcCCCCccCeEEEEeeEe-cCCCCh------HHHHHHHHHhhhccCCceEEEeec
Confidence 47899999994 2 233444443321111225799999999 666543 12222222111 112347899999
Q ss_pred cccC
Q 029390 118 HDYR 121 (194)
Q Consensus 118 HD~~ 121 (194)
||..
T Consensus 129 HE~~ 132 (316)
T cd07417 129 HETD 132 (316)
T ss_pred cchH
Confidence 9974
No 93
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=96.29 E-value=0.01 Score=50.36 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=41.2
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccC
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGN 117 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GN 117 (194)
-+++++||+|. + -.++.+.+... .....+-.+++||.+ +.|..+ .+.+..++... ...--++.+.||
T Consensus 43 ~~i~ViGDIHG-~---~~dL~~l~~~~-g~~~~~~ylFLGDyV-DRG~~s------~Evi~lL~~lki~~p~~v~lLRGN 110 (305)
T cd07416 43 APVTVCGDIHG-Q---FYDLLKLFEVG-GSPANTRYLFLGDYV-DRGYFS------IECVLYLWALKILYPKTLFLLRGN 110 (305)
T ss_pred CCEEEEEeCCC-C---HHHHHHHHHhc-CCCCCceEEEECCcc-CCCCCh------HHHHHHHHHHHhhcCCCEEEEeCC
Confidence 35899999995 2 23444444432 222347899999999 666543 12222222110 112348999999
Q ss_pred cccC
Q 029390 118 HDYR 121 (194)
Q Consensus 118 HD~~ 121 (194)
||..
T Consensus 111 HE~~ 114 (305)
T cd07416 111 HECR 114 (305)
T ss_pred CcHH
Confidence 9975
No 94
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=96.19 E-value=0.014 Score=48.44 Aligned_cols=76 Identities=17% Similarity=0.242 Sum_probs=40.4
Q ss_pred eEEEEEeCCCCCCC------------CCHHHHHHHHHHHhhhcCccEEEE-cCCccccCCCCCCCcHHHH--------HH
Q 029390 39 LSFLVVGDWGRRGA------------YNQTKVAHQMGIVGEKLKIDFIIS-TGDNFYDDGLTGVDDAAFF--------ES 97 (194)
Q Consensus 39 ~~f~~igD~g~~~~------------~~~~~v~~~~~~~~~~~~pdfvl~-~GD~~Y~~G~~~~~d~~~~--------~~ 97 (194)
++++.++|+|..-. .+-..++..++++.+ .+|+.++. .||++...... .+. +.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~-~~~~~l~ld~GD~~~gs~~~-----~~~~~~~~~~~~~ 74 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARA-ENPNTLLIDNGDTIQGSPLA-----DYYAKIEDGDPHP 74 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHh-cCCCeEEEeCCccCCccHHH-----HHhhhcccCCCCh
Confidence 57899999995210 011334555665543 35676655 99998322111 111 01
Q ss_pred hHhhhCCCCCCCceEEeccCcccCCC
Q 029390 98 FVNIYTAPSLAKQWYNVLGNHDYRGD 123 (194)
Q Consensus 98 ~~~~~~~~~l~iP~~~v~GNHD~~~~ 123 (194)
..+.+ ..++. -+.++||||+..+
T Consensus 75 ~~~~l--n~~g~-d~~~lGNHe~d~g 97 (277)
T cd07410 75 MIAAM--NALGY-DAGTLGNHEFNYG 97 (277)
T ss_pred HHHHH--HhcCC-CEEeecccCcccC
Confidence 11111 23333 4778899999865
No 95
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=96.02 E-value=0.015 Score=49.07 Aligned_cols=71 Identities=14% Similarity=0.187 Sum_probs=41.1
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccC
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGN 117 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GN 117 (194)
-.++++||+|. +-.++.+.+.+. .....+-++++||.+ +.|..+. +.+..++... ...--++.+.||
T Consensus 50 ~~i~viGDIHG----~~~~L~~l~~~~-~~~~~~~~lfLGDyV-DRG~~s~------e~i~ll~~lk~~~p~~i~llrGN 117 (293)
T cd07414 50 APLKICGDIHG----QYYDLLRLFEYG-GFPPESNYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGN 117 (293)
T ss_pred CceEEEEecCC----CHHHHHHHHHhc-CCCCcceEEEEeeEe-cCCCCcH------HHHHHHHHhhhhCCCcEEEEecc
Confidence 35899999994 223444455433 223446789999999 6665431 1222211110 112248999999
Q ss_pred cccC
Q 029390 118 HDYR 121 (194)
Q Consensus 118 HD~~ 121 (194)
||..
T Consensus 118 HE~~ 121 (293)
T cd07414 118 HECA 121 (293)
T ss_pred cchh
Confidence 9985
No 96
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.02 E-value=0.038 Score=42.45 Aligned_cols=73 Identities=18% Similarity=0.091 Sum_probs=42.7
Q ss_pred EEEEEeCCCCCCCC---------CHHHHHH-HHHHHhhhcCc-cEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCC
Q 029390 40 SFLVVGDWGRRGAY---------NQTKVAH-QMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (194)
Q Consensus 40 ~f~~igD~g~~~~~---------~~~~v~~-~~~~~~~~~~p-dfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~ 108 (194)
.+.++||+|- +.. +-.+..+ .+..+.+-.+| |.+-++||+.... ++. ....++. +.|+
T Consensus 5 mmyfisDtHf-gh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~-----n~~---~~a~~Il--erLn 73 (186)
T COG4186 5 MMYFISDTHF-GHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGA-----NRE---RAAGLIL--ERLN 73 (186)
T ss_pred EEEEeccccc-CCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEeccccccc-----chh---hHHHHHH--HHcC
Confidence 4678899885 211 1122222 33444444455 7899999999321 222 2233332 3577
Q ss_pred CceEEeccCcccCCC
Q 029390 109 KQWYNVLGNHDYRGD 123 (194)
Q Consensus 109 iP~~~v~GNHD~~~~ 123 (194)
.-...++||||-...
T Consensus 74 Grkhlv~GNhDk~~~ 88 (186)
T COG4186 74 GRKHLVPGNHDKCHP 88 (186)
T ss_pred CcEEEeeCCCCCCcc
Confidence 778999999998763
No 97
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=95.92 E-value=0.015 Score=48.88 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=40.8
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCC-CCCCCceEEeccCc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTA-PSLAKQWYNVLGNH 118 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~-~~l~iP~~~v~GNH 118 (194)
.++++||+|. .-.++.+.+... .....+-.+++||.+ +.|..+ .+.+..++.. ....-.++.+.|||
T Consensus 43 ~i~vvGDIHG----~~~dL~~ll~~~-~~~~~~~~lfLGDyV-DRG~~s------~evl~ll~~lk~~~p~~v~llrGNH 110 (285)
T cd07415 43 PVTVCGDIHG----QFYDLLELFRVG-GDPPDTNYLFLGDYV-DRGYYS------VETFLLLLALKVRYPDRITLLRGNH 110 (285)
T ss_pred CEEEEEeCCC----CHHHHHHHHHHc-CCCCCCeEEEEeEEC-CCCcCH------HHHHHHHHHHhhcCCCcEEEEeccc
Confidence 4899999994 223444444432 223446799999999 665432 1222222111 12234699999999
Q ss_pred ccC
Q 029390 119 DYR 121 (194)
Q Consensus 119 D~~ 121 (194)
|..
T Consensus 111 E~~ 113 (285)
T cd07415 111 ESR 113 (285)
T ss_pred chH
Confidence 974
No 98
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=95.79 E-value=0.017 Score=48.84 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=39.6
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccCcc
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNHD 119 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GNHD 119 (194)
+.++||+|. +-.++.+.+++.. ....+-.+++||.+ +.|..+ .+.+...+... ...-.++.+.||||
T Consensus 54 ~~ViGDIHG----~~~~L~~l~~~~~-~~~~~~~lfLGDyV-DRG~~s------~evl~ll~~lk~~~p~~v~llrGNHE 121 (294)
T PTZ00244 54 VRVCGDTHG----QYYDLLRIFEKCG-FPPYSNYLFLGDYV-DRGKHS------VETITLQFCYKIVYPENFFLLRGNHE 121 (294)
T ss_pred ceeeccCCC----CHHHHHHHHHHcC-CCCcccEEEeeeEe-cCCCCH------HHHHHHHHHHhhccCCeEEEEecccc
Confidence 789999994 2234444554432 22334688999999 666442 12222221111 12345899999999
Q ss_pred cC
Q 029390 120 YR 121 (194)
Q Consensus 120 ~~ 121 (194)
..
T Consensus 122 ~~ 123 (294)
T PTZ00244 122 CA 123 (294)
T ss_pred hH
Confidence 64
No 99
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=95.72 E-value=0.021 Score=48.80 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=41.0
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccC
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGN 117 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GN 117 (194)
-+++++||+|. +-.++.+.+... .....+-.+++||.+ +.|..+ .+.+..++... ...-.++.+.||
T Consensus 59 ~~i~vvGDIHG----~~~dL~~l~~~~-g~~~~~~ylfLGDyV-DRG~~s------~evl~ll~~lki~~p~~v~llRGN 126 (320)
T PTZ00480 59 APLKICGDVHG----QYFDLLRLFEYG-GYPPESNYLFLGDYV-DRGKQS------LETICLLLAYKIKYPENFFLLRGN 126 (320)
T ss_pred CCeEEEeeccc----CHHHHHHHHHhc-CCCCcceEEEeceec-CCCCCc------HHHHHHHHHhcccCCCceEEEecc
Confidence 35899999994 223444444432 222346788999999 666543 12222222111 112358999999
Q ss_pred cccC
Q 029390 118 HDYR 121 (194)
Q Consensus 118 HD~~ 121 (194)
||..
T Consensus 127 HE~~ 130 (320)
T PTZ00480 127 HECA 130 (320)
T ss_pred cchh
Confidence 9985
No 100
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=95.71 E-value=0.025 Score=46.77 Aligned_cols=59 Identities=10% Similarity=0.138 Sum_probs=28.5
Q ss_pred HHHHHHHhhhcCccEE-EEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccCCCc
Q 029390 59 AHQMGIVGEKLKIDFI-ISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 59 ~~~~~~~~~~~~pdfv-l~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~~~ 124 (194)
+..++++.++..++.+ +.+||++......... +. +...+.+ .. +++.++.||||++.+.
T Consensus 39 ~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~--~g-~~~~~~l--~~--~g~da~~GNHefd~g~ 98 (264)
T cd07411 39 ATLIKRIRAERNPNTLLLDGGDTWQGSGEALYT--RG-QAMVDAL--NA--LGVDAMVGHWEFTYGP 98 (264)
T ss_pred HHHHHHHHHhcCCCeEEEeCCCccCCChHHhhc--CC-hhHHHHH--Hh--hCCeEEecccccccCH
Confidence 3345444332267876 6799999332211000 00 0111111 12 4555555999998653
No 101
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=95.63 E-value=0.026 Score=47.97 Aligned_cols=70 Identities=20% Similarity=0.194 Sum_probs=40.3
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccCc
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNH 118 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GNH 118 (194)
.+.++||+|. +-.++.+.+.+.. ....+-.+++||.+ +.|..+ .+.+..++... ...--++.+.|||
T Consensus 44 ~i~vvGDIHG----~~~~L~~l~~~~~-~~~~~~~lfLGDyV-DRG~~s------~evl~ll~~lk~~~p~~v~llrGNH 111 (303)
T PTZ00239 44 PVNVCGDIHG----QFYDLQALFKEGG-DIPNANYIFIGDFV-DRGYNS------VETMEYLLCLKVKYPGNITLLRGNH 111 (303)
T ss_pred CEEEEEeCCC----CHHHHHHHHHhcC-CCCCceEEEeeeEc-CCCCCH------HHHHHHHHHhhhcCCCcEEEEeccc
Confidence 3889999994 2234444554322 22346799999999 666432 12222222111 1123489999999
Q ss_pred ccC
Q 029390 119 DYR 121 (194)
Q Consensus 119 D~~ 121 (194)
|..
T Consensus 112 E~~ 114 (303)
T PTZ00239 112 ESR 114 (303)
T ss_pred chH
Confidence 974
No 102
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=95.39 E-value=0.065 Score=53.31 Aligned_cols=82 Identities=15% Similarity=0.154 Sum_probs=46.1
Q ss_pred CCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEE-cCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEE
Q 029390 35 PDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIIS-TGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYN 113 (194)
Q Consensus 35 ~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~-~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~ 113 (194)
...++++++++|+|. ...+...++..++++.+ .+|+.++. .||++-...... ..+.. ...+.+ ..+ ..-+.
T Consensus 657 ~~~~l~Il~~nD~Hg-~l~g~~r~~~~i~~~r~-~~~~~l~ld~GD~~~gs~~~~--~~~g~-~~~~~l--n~l-g~d~~ 728 (1163)
T PRK09419 657 DNWELTILHTNDFHG-HLDGAAKRVTKIKEVKE-ENPNTILVDAGDVYQGSLYSN--LLKGL-PVLKMM--KEM-GYDAS 728 (1163)
T ss_pred CceEEEEEEEeeccc-CCCCHHHHHHHHHHHHh-hCCCeEEEecCCCCCCcchhh--hcCCh-HHHHHH--hCc-CCCEE
Confidence 445699999999994 22244556666776543 46777655 999983221110 00001 111111 122 23466
Q ss_pred eccCcccCCCc
Q 029390 114 VLGNHDYRGDV 124 (194)
Q Consensus 114 v~GNHD~~~~~ 124 (194)
++||||++.+.
T Consensus 729 ~~GNHEfd~g~ 739 (1163)
T PRK09419 729 TFGNHEFDWGP 739 (1163)
T ss_pred EecccccccCh
Confidence 99999997653
No 103
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=95.38 E-value=0.046 Score=46.58 Aligned_cols=71 Identities=18% Similarity=0.222 Sum_probs=38.8
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhc---C----ccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCce
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKL---K----IDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQW 111 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~---~----pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~ 111 (194)
.+.++||+|. .-.++.+.++++.... . ..-++++||++ +.|..+ .+.+..++... ...--+
T Consensus 49 ~~~viGDIHG----~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyV-DRGp~s------~evl~ll~~lk~~~p~~v 117 (311)
T cd07419 49 PIKIFGDIHG----QFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYV-DRGSNS------LETICLLLALKVKYPNQI 117 (311)
T ss_pred CEEEEEeccC----CHHHHHHHHHHcCCCcccccCCCcCceEEEECCcc-CCCCCh------HHHHHHHHHhhhcCCCcE
Confidence 4788999994 2234444444331100 0 12378999999 666543 12222222111 123458
Q ss_pred EEeccCcccC
Q 029390 112 YNVLGNHDYR 121 (194)
Q Consensus 112 ~~v~GNHD~~ 121 (194)
+.+.||||..
T Consensus 118 ~lLRGNHE~~ 127 (311)
T cd07419 118 HLIRGNHEDR 127 (311)
T ss_pred EEeccccchH
Confidence 9999999974
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=95.37 E-value=0.15 Score=50.86 Aligned_cols=48 Identities=13% Similarity=0.128 Sum_probs=29.4
Q ss_pred CCCCeEEEEEeCCCCC--CC--C--------CHHHHHHHHHHHhhhcCccEEEEcCCccc
Q 029390 35 PDGSLSFLVVGDWGRR--GA--Y--------NQTKVAHQMGIVGEKLKIDFIISTGDNFY 82 (194)
Q Consensus 35 ~~~~~~f~~igD~g~~--~~--~--------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y 82 (194)
+...++++..+|+|.. +. . +-..++..++++-++.+..+++..||++.
T Consensus 38 ~~~~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~q 97 (1163)
T PRK09419 38 PLVNIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQ 97 (1163)
T ss_pred CceEEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccC
Confidence 3467999999999952 10 0 11344556666543333345667999994
No 105
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=95.30 E-value=0.26 Score=40.56 Aligned_cols=73 Identities=26% Similarity=0.472 Sum_probs=47.9
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNH 118 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNH 118 (194)
.|++++||+= +......+...+.++..+.++||||..|-|. ..|. +.. + +.++.... .++ =+.++|||
T Consensus 1 mriLfiGDvv--Gk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENa-a~G~-Git-~---k~y~~l~~---~G~-dviT~GNH 68 (266)
T COG1692 1 MRILFIGDVV--GKPGRKAVKEHLPQLKSKYKIDFVIVNGENA-AGGF-GIT-E---KIYKELLE---AGA-DVITLGNH 68 (266)
T ss_pred CeEEEEeccc--CcchHHHHHHHhHHHHHhhcCcEEEEcCccc-cCCc-CCC-H---HHHHHHHH---hCC-CEEecccc
Confidence 4789999963 3345566777788888888999999999998 3432 211 1 22333221 222 35789999
Q ss_pred ccCCC
Q 029390 119 DYRGD 123 (194)
Q Consensus 119 D~~~~ 123 (194)
=|...
T Consensus 69 ~wd~~ 73 (266)
T COG1692 69 TWDQK 73 (266)
T ss_pred cccch
Confidence 99853
No 106
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=95.26 E-value=0.095 Score=43.98 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=41.8
Q ss_pred eEEEEEeCCCCCCCC----------CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCC
Q 029390 39 LSFLVVGDWGRRGAY----------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA 108 (194)
Q Consensus 39 ~~f~~igD~g~~~~~----------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~ 108 (194)
++++.++|+|..-.. .-..++..++++.++....+++..||++......+... +- +...+.+ ..++
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~-~g-~~~~~~~--n~~g 76 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALL-QD-EPTIEAL--NAMG 76 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcc-cC-CcHHHHH--HhhC
Confidence 478999999942000 12344555665543434458999999984332211000 00 0111111 2233
Q ss_pred CceEEeccCcccCCCc
Q 029390 109 KQWYNVLGNHDYRGDV 124 (194)
Q Consensus 109 iP~~~v~GNHD~~~~~ 124 (194)
.- ..++||||++.+.
T Consensus 77 ~D-a~t~GNHefd~G~ 91 (288)
T cd07412 77 VD-ASAVGNHEFDEGY 91 (288)
T ss_pred Ce-eeeecccccccCH
Confidence 33 5788999998653
No 107
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=95.02 E-value=0.19 Score=45.66 Aligned_cols=88 Identities=16% Similarity=0.106 Sum_probs=50.6
Q ss_pred CCCCCCCeEEEEEeCCCCCCC-----------CCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHh
Q 029390 32 PAKPDGSLSFLVVGDWGRRGA-----------YNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVN 100 (194)
Q Consensus 32 ~~~~~~~~~f~~igD~g~~~~-----------~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~ 100 (194)
......+++++..+|+|..-. .+...++..+++.-++.+..++|..||++-.+...+. ..+.. ...+
T Consensus 20 ~~~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~-~~~~ 97 (517)
T COG0737 20 AAAETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGE-PTVD 97 (517)
T ss_pred cccCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCC-hHHH
Confidence 345677999999999995211 0223445556665555566889999999933333221 01100 1111
Q ss_pred hhCCCCCCCceEEeccCcccCCCc
Q 029390 101 IYTAPSLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 101 ~~~~~~l~iP~~~v~GNHD~~~~~ 124 (194)
++ +.-..=..++||||+..+.
T Consensus 98 ~m---N~m~yDa~tiGNHEFd~g~ 118 (517)
T COG0737 98 LL---NALGYDAMTLGNHEFDYGL 118 (517)
T ss_pred HH---hhcCCcEEeecccccccCH
Confidence 11 1113457889999998763
No 108
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=94.62 E-value=0.38 Score=39.97 Aligned_cols=125 Identities=10% Similarity=-0.015 Sum_probs=64.3
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhh-----------hcCccEEEEcCCccccCCCCCC--------------CcHHHH
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGE-----------KLKIDFIISTGDNFYDDGLTGV--------------DDAAFF 95 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~-----------~~~pdfvl~~GD~~Y~~G~~~~--------------~d~~~~ 95 (194)
+++++|+|..+......-.+.+.++.. ..+..-+|.+||.+-..+.... +...-.
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 678899986432111112233333322 1244579999999943332110 001111
Q ss_pred HHhHhhhCCCCCCCceEEeccCcccCCCcccccc--ccc---ccCCCcceee-eeEEEeCCeEEEEEEcCcccccc
Q 029390 96 ESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLS--PVL---RDIDSRWLCL-RSFIVNAEIAEFIFVDTTPFVNK 165 (194)
Q Consensus 96 ~~~~~~~~~~~l~iP~~~v~GNHD~~~~~~~~~~--~~~---~~~~~~~~~p-~~ysf~~g~v~fI~lDT~~~~~~ 165 (194)
+.+...+..-.-.+|+...|||||-......|.. ..+ +..+..+..- .-|.|+.++++|++...+.+.+.
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~~~~vtNP~~~~i~g~~vLgtsGqni~Di 157 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYSTLNLVTNPYEFSIDGVRVLGTSGQNVDDI 157 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCCcEEeCCCeEEEECCEEEEEECCCCHHHH
Confidence 1222222111226899999999998765433321 101 0011122222 24678889999999988876554
No 109
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=94.48 E-value=0.035 Score=43.63 Aligned_cols=46 Identities=26% Similarity=0.273 Sum_probs=31.6
Q ss_pred ccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccCCCc
Q 029390 71 IDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 71 pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~~~ 124 (194)
-|.|+..||+.+....+. -++.+.- ...+...-|.+.|||||+...
T Consensus 44 eDiVllpGDiSWaM~l~e-----a~~Dl~~---i~~LPG~K~m~rGNHDYWw~s 89 (230)
T COG1768 44 EDIVLLPGDISWAMRLEE-----AEEDLRF---IGDLPGTKYMIRGNHDYWWSS 89 (230)
T ss_pred hhEEEecccchhheechh-----hhhhhhh---hhcCCCcEEEEecCCccccch
Confidence 389999999997765431 1111211 145777899999999998753
No 110
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=94.24 E-value=0.28 Score=40.92 Aligned_cols=79 Identities=19% Similarity=0.255 Sum_probs=40.6
Q ss_pred eEEEEEeCCCCC--CC-C--------------CHHHHHHHHHHHhhhcCcc-EEEEcCCccccCCCCCCCcHHHHHHhHh
Q 029390 39 LSFLVVGDWGRR--GA-Y--------------NQTKVAHQMGIVGEKLKID-FIISTGDNFYDDGLTGVDDAAFFESFVN 100 (194)
Q Consensus 39 ~~f~~igD~g~~--~~-~--------------~~~~v~~~~~~~~~~~~pd-fvl~~GD~~Y~~G~~~~~d~~~~~~~~~ 100 (194)
++++.++|+|.. +. . .-..++..++++.++ .++ +++..||++........... +...+
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~-~~~~l~ld~GD~~~gs~~~~~~~g---~~~~~ 76 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAE-NPNVLFLNAGDAFQGTLWYTLYKG---NADAE 76 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhc-CCCEEEEeCCCCCCCcchhhhcCC---hHHHH
Confidence 478899999842 00 0 113344455555433 455 67779999843322110000 11112
Q ss_pred hhCCCCCCCceEEeccCcccCCCc
Q 029390 101 IYTAPSLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 101 ~~~~~~l~iP~~~v~GNHD~~~~~ 124 (194)
.+ ..++.. ..++||||++.+.
T Consensus 77 ~l--n~~g~D-~~~lGNHefd~G~ 97 (281)
T cd07409 77 FM--NLLGYD-AMTLGNHEFDDGV 97 (281)
T ss_pred HH--HhcCCC-EEEeccccccCCH
Confidence 11 234444 5567999998754
No 111
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.10 E-value=0.52 Score=42.26 Aligned_cols=94 Identities=15% Similarity=0.228 Sum_probs=49.1
Q ss_pred CCCCCCeEEEEEeCCCCCCCCC--HHHHHHHHHHHhh----hcCccEEEEcCCccccCCCCCCCc--------HHHHHHh
Q 029390 33 AKPDGSLSFLVVGDWGRRGAYN--QTKVAHQMGIVGE----KLKIDFIISTGDNFYDDGLTGVDD--------AAFFESF 98 (194)
Q Consensus 33 ~~~~~~~~f~~igD~g~~~~~~--~~~v~~~~~~~~~----~~~pdfvl~~GD~~Y~~G~~~~~d--------~~~~~~~ 98 (194)
...+..++.++++|+|. |+.. .......+..+.. ..+...++..||.+=.-|.-..+. .+-.+.+
T Consensus 220 ~~~~e~v~v~~isDih~-GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~ 298 (481)
T COG1311 220 NTGDERVYVALISDIHR-GSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEEL 298 (481)
T ss_pred CCCCcceEEEEEeeeec-ccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHH
Confidence 34667789999999996 4211 1111222222211 123478999999991122211111 1112223
Q ss_pred HhhhCCCCCCCceEEeccCcccCCCcccc
Q 029390 99 VNIYTAPSLAKQWYNVLGNHDYRGDVEAQ 127 (194)
Q Consensus 99 ~~~~~~~~l~iP~~~v~GNHD~~~~~~~~ 127 (194)
.+.+...--.+.++..|||||..-....|
T Consensus 299 A~~L~~vp~~I~v~i~PGnhDa~r~a~PQ 327 (481)
T COG1311 299 AEFLDQVPEHIKVFIMPGNHDAVRQALPQ 327 (481)
T ss_pred HHHHhhCCCCceEEEecCCCCccccccCC
Confidence 33222112357899999999997654333
No 112
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=93.96 E-value=0.28 Score=41.19 Aligned_cols=83 Identities=19% Similarity=0.254 Sum_probs=40.9
Q ss_pred CCCeEEEEEeCCCCC--CCC-------CHHHHHHHHHHH---hhhcCcc-EEEEcCCccccCCCCCCCcHHHHHHhHhhh
Q 029390 36 DGSLSFLVVGDWGRR--GAY-------NQTKVAHQMGIV---GEKLKID-FIISTGDNFYDDGLTGVDDAAFFESFVNIY 102 (194)
Q Consensus 36 ~~~~~f~~igD~g~~--~~~-------~~~~v~~~~~~~---~~~~~pd-fvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~ 102 (194)
-.+++++..+|+|.. +.. .-..+++.++++ .++..++ +++..||.+-..........+. +..-+++
T Consensus 3 ~~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g-~~~~~~m 81 (282)
T cd07407 3 WGDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPG-SYSNPIF 81 (282)
T ss_pred cceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCC-hHHHHHH
Confidence 357899999999942 100 112234433333 2233444 6788999993322211110011 1111211
Q ss_pred CCCCCCCceEEeccCcccCC
Q 029390 103 TAPSLAKQWYNVLGNHDYRG 122 (194)
Q Consensus 103 ~~~~l~iP~~~v~GNHD~~~ 122 (194)
..+ .-=..++||||++.
T Consensus 82 --N~m-gyDa~tlGNHEFd~ 98 (282)
T cd07407 82 --RMM-PYDLLTIGNHELYN 98 (282)
T ss_pred --Hhc-CCcEEeecccccCc
Confidence 111 23468899999964
No 113
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=93.90 E-value=0.27 Score=45.08 Aligned_cols=80 Identities=13% Similarity=0.145 Sum_probs=41.6
Q ss_pred eEEEEEeCCCCC-CCC----------------CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhh
Q 029390 39 LSFLVVGDWGRR-GAY----------------NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNI 101 (194)
Q Consensus 39 ~~f~~igD~g~~-~~~----------------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~ 101 (194)
++++.+.|+|.. ... .-..++..++++-++.+..+++..||++.......... - +..-++
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~--g-~~~i~~ 77 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFG--G-RADAAL 77 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcC--C-HHHHHH
Confidence 478888888841 000 11234445555544445578999999984321110000 0 001111
Q ss_pred hCCCCCCCceEEeccCcccCCCc
Q 029390 102 YTAPSLAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 102 ~~~~~l~iP~~~v~GNHD~~~~~ 124 (194)
+ ..+ ..=..++||||++.+.
T Consensus 78 ~--N~~-g~Da~~lGNHEFd~G~ 97 (550)
T TIGR01530 78 M--NAA-GFDFFTLGNHEFDAGN 97 (550)
T ss_pred H--hcc-CCCEEEeccccccCCH
Confidence 1 122 3457889999998763
No 114
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=93.73 E-value=0.39 Score=45.89 Aligned_cols=47 Identities=19% Similarity=0.234 Sum_probs=30.8
Q ss_pred CCCCeEEEEEeCCCCC--C--CC--------CHHHHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 35 PDGSLSFLVVGDWGRR--G--AY--------NQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 35 ~~~~~~f~~igD~g~~--~--~~--------~~~~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
....++++..+|+|.. . ++ .-..++..++++-++.+-.+++..||++
T Consensus 36 ~~~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~i 94 (780)
T PRK09418 36 STVNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDAL 94 (780)
T ss_pred CceEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCC
Confidence 4568999999999952 1 01 1123455566554444447899999999
No 115
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=93.32 E-value=0.28 Score=41.84 Aligned_cols=43 Identities=19% Similarity=0.313 Sum_probs=26.3
Q ss_pred eEEEEEeCCCCC--CCCCHHHHHHHHHHHhhh----cCccEEEEcCCcc
Q 029390 39 LSFLVVGDWGRR--GAYNQTKVAHQMGIVGEK----LKIDFIISTGDNF 81 (194)
Q Consensus 39 ~~f~~igD~g~~--~~~~~~~v~~~~~~~~~~----~~pdfvl~~GD~~ 81 (194)
++++...|+|.. ....-..++..++++-++ .+..+++..||++
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~ 49 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNF 49 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccc
Confidence 478999999952 111223444445554322 3456899999998
No 116
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=93.27 E-value=0.37 Score=40.35 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=40.1
Q ss_pred eEEEEEeCCCCC--CC-C---CHHHHHHHHHHHhhh----cCccEEEEcCCccccCCCCCCCcHHHHH--HhHhhhCCCC
Q 029390 39 LSFLVVGDWGRR--GA-Y---NQTKVAHQMGIVGEK----LKIDFIISTGDNFYDDGLTGVDDAAFFE--SFVNIYTAPS 106 (194)
Q Consensus 39 ~~f~~igD~g~~--~~-~---~~~~v~~~~~~~~~~----~~pdfvl~~GD~~Y~~G~~~~~d~~~~~--~~~~~~~~~~ 106 (194)
++++..+|+|.. .. . .-..++..++++.++ .+..+++..||++...... .+.+ ...+.+ ..
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~-----~~~~g~~~~~~~--n~ 73 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPES-----DLQDAEPDFRGM--NL 73 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhH-----HhcCcchHHHHH--Hh
Confidence 478999999952 10 0 112344455554322 3456899999998322110 0100 000111 22
Q ss_pred CCCceEEeccCcccCCCc
Q 029390 107 LAKQWYNVLGNHDYRGDV 124 (194)
Q Consensus 107 l~iP~~~v~GNHD~~~~~ 124 (194)
++.- ..++||||++.+.
T Consensus 74 ~g~D-a~~~GNHEfD~G~ 90 (285)
T cd07405 74 VGYD-AMAVGNHEFDNPL 90 (285)
T ss_pred hCCc-EEeecccccccCH
Confidence 3333 4577999998763
No 117
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=92.38 E-value=0.67 Score=38.31 Aligned_cols=70 Identities=24% Similarity=0.452 Sum_probs=36.5
Q ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccC
Q 029390 42 LVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (194)
Q Consensus 42 ~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (194)
+++||.= +......+.+.+.++.++.++||||..|.|. ..|. +.. +. .+++++ +.++- ..+.|||=|.
T Consensus 1 LfiGDIv--G~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENa-a~G~-Git-~~---~~~~L~---~~GvD-viT~GNH~wd 68 (253)
T PF13277_consen 1 LFIGDIV--GKPGRRAVKEHLPELKEEYGIDFVIANGENA-AGGF-GIT-PK---IAEELF---KAGVD-VITMGNHIWD 68 (253)
T ss_dssp EEE-EBB--CHHHHHHHHHHHHHHGG--G-SEEEEE-TTT-TTTS-S---HH---HHHHHH---HHT-S-EEE--TTTTS
T ss_pred CeEEecC--CHHHHHHHHHHHHHHHhhcCCCEEEECCccc-CCCC-CCC-HH---HHHHHH---hcCCC-EEecCccccc
Confidence 3678842 2223456777788888888999999999999 4433 211 22 222322 12222 4689999998
Q ss_pred CC
Q 029390 122 GD 123 (194)
Q Consensus 122 ~~ 123 (194)
..
T Consensus 69 kk 70 (253)
T PF13277_consen 69 KK 70 (253)
T ss_dssp ST
T ss_pred Cc
Confidence 64
No 118
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=91.76 E-value=0.96 Score=42.45 Aligned_cols=47 Identities=13% Similarity=0.166 Sum_probs=30.8
Q ss_pred CCCeEEEEEeCCCCCC-CC-----------CHHHHHHHHHHHhhhcCccEEEEcCCccc
Q 029390 36 DGSLSFLVVGDWGRRG-AY-----------NQTKVAHQMGIVGEKLKIDFIISTGDNFY 82 (194)
Q Consensus 36 ~~~~~f~~igD~g~~~-~~-----------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y 82 (194)
...++++..+|+|..= .+ .-..++..++++-++.+..+++..||++.
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~q 81 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQ 81 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCC
Confidence 5689999999999520 00 11345556666543444468999999994
No 119
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=91.59 E-value=0.15 Score=40.36 Aligned_cols=122 Identities=11% Similarity=-0.029 Sum_probs=52.8
Q ss_pred EEEEeCCCCCCCC-CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCC---------CCcHHHHHHhHhhhCCCCCCCc
Q 029390 41 FLVVGDWGRRGAY-NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTG---------VDDAAFFESFVNIYTAPSLAKQ 110 (194)
Q Consensus 41 f~~igD~g~~~~~-~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~---------~~d~~~~~~~~~~~~~~~l~iP 110 (194)
+++++|.+..... .-+.+.+.+..+.++.+|+.+|++|+++-...... .....+...+...+..-.-.++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788887753111 11223333333322568999999999993211100 0001111222222221112689
Q ss_pred eEEeccCcccCCC-ccccccc--cccc-CCCc--cee-eeeEEEeCCeEEEEEEcCccc
Q 029390 111 WYNVLGNHDYRGD-VEAQLSP--VLRD-IDSR--WLC-LRSFIVNAEIAEFIFVDTTPF 162 (194)
Q Consensus 111 ~~~v~GNHD~~~~-~~~~~~~--~~~~-~~~~--~~~-p~~ysf~~g~v~fI~lDT~~~ 162 (194)
+..+||+||-... .--|-.. .+.. ..++ ..+ +.=+.++.++..|.+.....+
T Consensus 81 vvlvPg~~D~~~~~~lPq~pl~~~~~~~~~~~~~~~~~sNP~~~~i~~~~i~~~s~d~~ 139 (209)
T PF04042_consen 81 VVLVPGPNDPTSSPVLPQPPLHSKLFPKLKKYSNIHFVSNPCRISINGQEIGVTSGDIL 139 (209)
T ss_dssp EEEE--TTCTT-S-SCSB----TTTTCHHCTTTTEEE--CSEEEEETTEEEEE-SSHHH
T ss_pred EEEeCCCccccccCCCCCCCCCHHHHhhhhhcCceEEeCCCeEEEEeCCcEEEECCcHH
Confidence 9999999998765 2222110 0100 0111 222 333556666888877766544
No 120
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=91.42 E-value=0.48 Score=40.76 Aligned_cols=74 Identities=16% Similarity=0.266 Sum_probs=43.5
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCc-cEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEecc
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKI-DFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~p-dfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~G 116 (194)
+--+.++||+|. |. .++.+.+..... .+| .-.+++||++ +.|..+...-.+.-.++. ...--++...|
T Consensus 58 ~aPV~i~GDiHG-q~---~DLlrlf~~~g~-~pp~~~ylFLGDYV-DRG~~slE~i~LL~a~Ki-----~yp~~~~lLRG 126 (331)
T KOG0374|consen 58 SAPVKIVGDIHG-QF---GDLLRLFDLLGS-FPPDQNYVFLGDYV-DRGKQSLETICLLFALKI-----KYPENVFLLRG 126 (331)
T ss_pred CCCEEEEccCcC-CH---HHHHHHHHhcCC-CCCcccEEEecccc-cCCccceEEeehhhhhhh-----hCCceEEEecc
Confidence 346889999995 32 245555543321 234 4599999999 666543222112111221 23456999999
Q ss_pred CcccCC
Q 029390 117 NHDYRG 122 (194)
Q Consensus 117 NHD~~~ 122 (194)
|||...
T Consensus 127 NHE~~~ 132 (331)
T KOG0374|consen 127 NHECAS 132 (331)
T ss_pred cccccc
Confidence 999874
No 121
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=89.48 E-value=0.92 Score=43.63 Aligned_cols=48 Identities=15% Similarity=0.147 Sum_probs=30.3
Q ss_pred CCCCeEEEEEeCCCCC--C--CC--------CHHHHHHHHHHHhhhcCccEEEEcCCccc
Q 029390 35 PDGSLSFLVVGDWGRR--G--AY--------NQTKVAHQMGIVGEKLKIDFIISTGDNFY 82 (194)
Q Consensus 35 ~~~~~~f~~igD~g~~--~--~~--------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y 82 (194)
....++++..+|+|.. + ++ .-..++..++++-++..-.+++..||++-
T Consensus 112 ~~~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQ 171 (814)
T PRK11907 112 QTVDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQ 171 (814)
T ss_pred CceEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCC
Confidence 3447999999999953 1 00 11234445665533444468999999993
No 122
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=89.09 E-value=0.88 Score=42.49 Aligned_cols=45 Identities=18% Similarity=0.254 Sum_probs=29.1
Q ss_pred CeEEEEEeCCCCC--CC--C--------CHHHHHHHHHHHhhhcCccEEEEcCCccc
Q 029390 38 SLSFLVVGDWGRR--GA--Y--------NQTKVAHQMGIVGEKLKIDFIISTGDNFY 82 (194)
Q Consensus 38 ~~~f~~igD~g~~--~~--~--------~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y 82 (194)
.++++..+|+|.. +. + .-..++..+++.-++....+++..||++-
T Consensus 2 ~l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~q 58 (626)
T TIGR01390 2 DLRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQ 58 (626)
T ss_pred eEEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCC
Confidence 5899999999952 11 0 11345556665543444578999999993
No 123
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=84.87 E-value=2.1 Score=35.88 Aligned_cols=72 Identities=21% Similarity=0.233 Sum_probs=44.6
Q ss_pred CCCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCC-Cce
Q 029390 33 AKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLA-KQW 111 (194)
Q Consensus 33 ~~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~-iP~ 111 (194)
+......+|+.++|.|.. ..+ +. .-..-|+.+++||.. ..| .+++-..|.+.. .++. -=-
T Consensus 56 p~~~~~~r~VcisdtH~~-~~~-------i~---~~p~gDvlihagdfT-~~g-----~~~ev~~fn~~~--gslph~yK 116 (305)
T KOG3947|consen 56 PVGPGYARFVCISDTHEL-TFD-------IN---DIPDGDVLIHAGDFT-NLG-----LPEEVIKFNEWL--GSLPHEYK 116 (305)
T ss_pred CCCCCceEEEEecCcccc-cCc-------cc---cCCCCceEEeccCCc-ccc-----CHHHHHhhhHHh--ccCcceee
Confidence 345668999999999852 111 11 123458999999998 433 344545555532 2331 224
Q ss_pred EEeccCcccCCC
Q 029390 112 YNVLGNHDYRGD 123 (194)
Q Consensus 112 ~~v~GNHD~~~~ 123 (194)
.++.||||...+
T Consensus 117 IVIaGNHELtFd 128 (305)
T KOG3947|consen 117 IVIAGNHELTFD 128 (305)
T ss_pred EEEeeccceeec
Confidence 678999998765
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=84.45 E-value=6.1 Score=33.42 Aligned_cols=85 Identities=11% Similarity=-0.008 Sum_probs=47.9
Q ss_pred CCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhh--------hcCccEEEEcCCccccC-CCCCCCcHHHHHHhHhhhC-
Q 029390 34 KPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGE--------KLKIDFIISTGDNFYDD-GLTGVDDAAFFESFVNIYT- 103 (194)
Q Consensus 34 ~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~--------~~~pdfvl~~GD~~Y~~-G~~~~~d~~~~~~~~~~~~- 103 (194)
+.+...+|+++||.+. ++..+.+++.++-+ ...|-.+|++|++.-.. .........+.+.|+....
T Consensus 23 ~~~~~~~~VilSDV~L----D~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~l 98 (291)
T PTZ00235 23 KNDKRHNWIIMHDVYL----DSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVM 98 (291)
T ss_pred cCCCceEEEEEEeecc----CCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHH
Confidence 3556799999999986 33334444443221 23488999999988321 0001111123333443321
Q ss_pred ----CCCC--CCceEEeccCcccCC
Q 029390 104 ----APSL--AKQWYNVLGNHDYRG 122 (194)
Q Consensus 104 ----~~~l--~iP~~~v~GNHD~~~ 122 (194)
...+ +.-+..|||-.|-+.
T Consensus 99 lls~fp~L~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 99 LISKFKLILEHCYLIFIPGINDPCA 123 (291)
T ss_pred HHHhChHHHhcCeEEEECCCCCCCc
Confidence 1112 467999999999754
No 125
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=81.32 E-value=3.1 Score=34.44 Aligned_cols=70 Identities=21% Similarity=0.287 Sum_probs=37.5
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCC-CCCCceEEeccCcc
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAP-SLAKQWYNVLGNHD 119 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~-~l~iP~~~v~GNHD 119 (194)
+.+.||+|. |. .++.+.+. +-..-.-.=-+++||.+ +-|..+. +.|..++..+ ...--+..+.||||
T Consensus 45 vtvcGDIHG-Qf---~Dllelf~-igG~~~~t~YLFLGDyV-DRG~~Sv------Et~lLLl~lK~rYP~ritLiRGNHE 112 (303)
T KOG0372|consen 45 VTVCGDIHG-QF---YDLLELFR-IGGDVPETNYLFLGDYV-DRGYYSV------ETFLLLLALKVRYPDRITLIRGNHE 112 (303)
T ss_pred cEEeecccc-hH---HHHHHHHH-hCCCCCCCceEeecchh-ccccchH------HHHHHHHHHhhcCcceeEEeeccch
Confidence 468999995 32 23333332 22111123479999999 6655432 1222222111 11234889999999
Q ss_pred cCC
Q 029390 120 YRG 122 (194)
Q Consensus 120 ~~~ 122 (194)
-+.
T Consensus 113 sRq 115 (303)
T KOG0372|consen 113 SRQ 115 (303)
T ss_pred hhh
Confidence 874
No 126
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=79.54 E-value=12 Score=32.69 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=51.3
Q ss_pred cCccEEEEcCCccc-cCCCC--CCCc-HHHH--HHhHhhhCC-CCCCCceEEeccCcccCCCcccccccccccCCCccee
Q 029390 69 LKIDFIISTGDNFY-DDGLT--GVDD-AAFF--ESFVNIYTA-PSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLC 141 (194)
Q Consensus 69 ~~pdfvl~~GD~~Y-~~G~~--~~~d-~~~~--~~~~~~~~~-~~l~iP~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~ 141 (194)
.+.|++|..||+-- .++.+ +..- +.+. ..|-..|.. ....+|..++-||||-.. ...++.| .-|..
T Consensus 29 tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIFIGGNHEAsn-yL~eLpy------GGwVA 101 (456)
T KOG2863|consen 29 TKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIFIGGNHEASN-YLQELPY------GGWVA 101 (456)
T ss_pred CCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEEecCchHHHH-HHHhccc------Cceec
Confidence 58899999999862 12111 1111 2222 235555543 345789999999999863 3334442 45666
Q ss_pred ee-eEE-----EeCCeEEEEEEcCcc
Q 029390 142 LR-SFI-----VNAEIAEFIFVDTTP 161 (194)
Q Consensus 142 p~-~ys-----f~~g~v~fI~lDT~~ 161 (194)
|. ||- ++++++++=.|....
T Consensus 102 pNIyYlG~agVv~~~gvRIggiSGI~ 127 (456)
T KOG2863|consen 102 PNIYYLGYAGVVNFGGVRIGGISGIY 127 (456)
T ss_pred cceEEeeecceEEECCEEEeeccchh
Confidence 65 332 566888888886643
No 127
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=79.27 E-value=2.4 Score=35.92 Aligned_cols=85 Identities=16% Similarity=0.198 Sum_probs=45.5
Q ss_pred EEEcCCccccCCCCCCC--cHHHHHHhHhhhCC----CCCCCceEEeccCcccCCCc--------ccccccccc---cCC
Q 029390 74 IISTGDNFYDDGLTGVD--DAAFFESFVNIYTA----PSLAKQWYNVLGNHDYRGDV--------EAQLSPVLR---DID 136 (194)
Q Consensus 74 vl~~GD~~Y~~G~~~~~--d~~~~~~~~~~~~~----~~l~iP~~~v~GNHD~~~~~--------~~~~~~~~~---~~~ 136 (194)
.+.-||++-+.|....+ +..-.+.|+..|+. ..+.+|+|.-+||||...+. ..++.. |. +..
T Consensus 130 lV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrd-yve~~Hr~ 208 (392)
T COG5555 130 LVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRD-YVENYHRS 208 (392)
T ss_pred EEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHH-HHHhhcCc
Confidence 55667999443332211 11112345554531 12468999999999997542 112111 11 111
Q ss_pred Cc-ceee----------eeEEEeCCeEEEEEEcC
Q 029390 137 SR-WLCL----------RSFIVNAEIAEFIFVDT 159 (194)
Q Consensus 137 ~~-~~~p----------~~ysf~~g~v~fI~lDT 159 (194)
.. |..| ..||+|.+++|.+-.-+
T Consensus 209 ~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hr 242 (392)
T COG5555 209 DVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHR 242 (392)
T ss_pred CcccCCCCCcccccccchheeccccceeEEEEee
Confidence 11 2211 37999999999887755
No 128
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=78.51 E-value=4.2 Score=33.95 Aligned_cols=73 Identities=21% Similarity=0.270 Sum_probs=39.4
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccE-EEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEecc
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDF-IISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdf-vl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~G 116 (194)
..-..+.||.|. +. .+..+.+ ++- -..||. -+++||.+ +.|..+...-...-..+- ...--+-.++|
T Consensus 59 ~~pvtvcGDvHG-qf---~dl~ELf-kiG-G~~pdtnylfmGDyv-drGy~SvetVS~lva~Kv-----ry~~rvtilrG 126 (319)
T KOG0371|consen 59 NCPVTVCGDVHG-QF---HDLIELF-KIG-GLAPDTNYLFMGDYV-DRGYYSVETVSLLVALKV-----RYPDRVTILRG 126 (319)
T ss_pred ccceEEecCcch-hH---HHHHHHH-Hcc-CCCCCcceeeeeeec-ccccchHHHHHHHHHhhc-----cccceeEEecC
Confidence 344678999984 31 2344443 222 245555 89999999 565543211111111111 11234778999
Q ss_pred CcccCC
Q 029390 117 NHDYRG 122 (194)
Q Consensus 117 NHD~~~ 122 (194)
|||.+.
T Consensus 127 NHEsrq 132 (319)
T KOG0371|consen 127 NHESRQ 132 (319)
T ss_pred chHHHH
Confidence 999873
No 129
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.00 E-value=11 Score=33.83 Aligned_cols=69 Identities=22% Similarity=0.318 Sum_probs=43.3
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcC-ccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccC
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLK-IDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~-pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
.+++++||.- + .-..+.+.++++.++.. .|++|.+|+++ +. +.++.+|. .++. ....+.||+|..-+|
T Consensus 6 ~kILv~Gd~~--G--r~~eli~rI~~v~Kk~GpFd~liCvGnfF-~~---~~~~~e~~-~ykn--g~~~vPiptY~~g~~ 74 (528)
T KOG2476|consen 6 AKILVCGDVE--G--RFDELIKRIQKVNKKSGPFDLLICVGNFF-GH---DTQNAEVE-KYKN--GTKKVPIPTYFLGDN 74 (528)
T ss_pred ceEEEEcCcc--c--cHHHHHHHHHHHhhcCCCceEEEEecccC-CC---ccchhHHH-HHhc--CCccCceeEEEecCC
Confidence 7899999942 1 22334455666665555 69999999998 22 11233332 2322 234678999998887
Q ss_pred c
Q 029390 118 H 118 (194)
Q Consensus 118 H 118 (194)
-
T Consensus 75 ~ 75 (528)
T KOG2476|consen 75 A 75 (528)
T ss_pred C
Confidence 6
No 130
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=68.61 E-value=11 Score=34.92 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=48.8
Q ss_pred CCCCCeEEEEEeCCCCC-CC------CC-----HHHHHHHHHHHhhhcCccE-EEEcCCccccCCCCCCCcHH-HHHHhH
Q 029390 34 KPDGSLSFLVVGDWGRR-GA------YN-----QTKVAHQMGIVGEKLKIDF-IISTGDNFYDDGLTGVDDAA-FFESFV 99 (194)
Q Consensus 34 ~~~~~~~f~~igD~g~~-~~------~~-----~~~v~~~~~~~~~~~~pdf-vl~~GD~~Y~~G~~~~~d~~-~~~~~~ 99 (194)
......+|..-+|+|.- +. ++ -...+..|++++++..+|. .+-+||.--.+|.....+++ ....+.
T Consensus 38 ~~~~~~nf~hTtdthG~~~~h~~~~~~~~~~G~f~~f~~~~k~~a~~~~~dvl~~dtGD~hdGtg~sd~~~~~g~~t~~l 117 (602)
T KOG4419|consen 38 LNWGQPNFIHTTDTHGWLGSHLRDARYDADFGDFAAFALRMKELADRKGVDVLLVDTGDLHDGTGLSDATDPPGIYTNFL 117 (602)
T ss_pred cccccccceeeccccccccccccchhhhhhhhhHHHHHHHHHHHHhccCCCEEEEecccccCCceeeeccCCchHHHHHH
Confidence 45667899999998841 20 11 1334556777777666664 78899986444554333332 222221
Q ss_pred hhhCCCCCCCc-eEEeccCcccCCC
Q 029390 100 NIYTAPSLAKQ-WYNVLGNHDYRGD 123 (194)
Q Consensus 100 ~~~~~~~l~iP-~~~v~GNHD~~~~ 123 (194)
.- ..| =..++||||.+..
T Consensus 118 ~~------~~~yD~l~lGNHEl~~~ 136 (602)
T KOG4419|consen 118 FK------MMPYDILTLGNHELYQA 136 (602)
T ss_pred Hh------cCccchhhhcchhhhhh
Confidence 11 123 3468999999865
No 131
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=62.14 E-value=11 Score=35.22 Aligned_cols=49 Identities=29% Similarity=0.507 Sum_probs=32.0
Q ss_pred HHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCccc
Q 029390 61 QMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDY 120 (194)
Q Consensus 61 ~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~ 120 (194)
++..+.++.-.|-+-.+||++ +-|+.. | .....++...++.+-| ||||.
T Consensus 175 al~~lIqrL~VDhLHIvGDIy-DRGp~p--d----~ImD~Lm~~hsvDIQW----GNHDI 223 (640)
T PF06874_consen 175 ALSELIQRLAVDHLHIVGDIY-DRGPRP--D----KIMDRLMNYHSVDIQW----GNHDI 223 (640)
T ss_pred HHHHHHHHHhhhheeeccccc-CCCCCh--h----HHHHHHhcCCCccccc----cchHH
Confidence 344555667789999999997 777653 1 2233333335666666 99997
No 132
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=61.50 E-value=23 Score=31.13 Aligned_cols=70 Identities=20% Similarity=0.269 Sum_probs=36.5
Q ss_pred EEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCcc--EEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccC
Q 029390 40 SFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKID--FIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 40 ~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pd--fvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
-+-+.||+|. |.++ +.+.+ ++. ..|. =-+++||.+ +.|.-+.. ...=-|... -.....++...||
T Consensus 89 PiTVCGDIHG-Qf~D---LmKLF-EVG--G~PA~t~YLFLGDYV-DRGyFSiE--CvlYLwsLK---i~yp~tl~lLRGN 155 (517)
T KOG0375|consen 89 PITVCGDIHG-QFFD---LMKLF-EVG--GSPANTRYLFLGDYV-DRGYFSIE--CVLYLWSLK---INYPKTLFLLRGN 155 (517)
T ss_pred CeeEecccch-HHHH---HHHHH-Hcc--CCcccceeEeecccc-ccceeeee--hHHHHHHHh---cCCCCeEEEecCC
Confidence 3567899994 3222 22111 121 2332 379999998 55543211 111112110 1224568999999
Q ss_pred cccCC
Q 029390 118 HDYRG 122 (194)
Q Consensus 118 HD~~~ 122 (194)
||++.
T Consensus 156 HECrH 160 (517)
T KOG0375|consen 156 HECRH 160 (517)
T ss_pred cchhh
Confidence 99974
No 133
>PF15240 Pro-rich: Proline-rich
Probab=58.42 E-value=6.8 Score=30.71 Aligned_cols=16 Identities=31% Similarity=0.308 Sum_probs=9.8
Q ss_pred CchhHHHHHHHHHHhh
Q 029390 1 MSLTLIITFIALLGSL 16 (194)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (194)
|.|+||+|+++||.+|
T Consensus 1 MLlVLLSvALLALSSA 16 (179)
T PF15240_consen 1 MLLVLLSVALLALSSA 16 (179)
T ss_pred ChhHHHHHHHHHhhhc
Confidence 7777777755555443
No 134
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=50.04 E-value=45 Score=27.38 Aligned_cols=69 Identities=23% Similarity=0.264 Sum_probs=37.2
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccE-EEEcCCccccCCCCCCCcHHHHHHhHhhhCC-CCCCCceEEeccCc
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDF-IISTGDNFYDDGLTGVDDAAFFESFVNIYTA-PSLAKQWYNVLGNH 118 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdf-vl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~-~~l~iP~~~v~GNH 118 (194)
+-+.||+|. |. .++.+.+. ...+ =||. -|++||.+ +.|.-+. +.|-.++.. .+..-.+-.+.|||
T Consensus 48 VTvCGDIHG-QF---yDL~eLFr-tgG~-vP~tnYiFmGDfV-DRGyySL------EtfT~l~~LkaryP~~ITLlRGNH 114 (306)
T KOG0373|consen 48 VTVCGDIHG-QF---YDLLELFR-TGGQ-VPDTNYIFMGDFV-DRGYYSL------ETFTLLLLLKARYPAKITLLRGNH 114 (306)
T ss_pred eeEeeccch-hH---HHHHHHHH-hcCC-CCCcceEEecccc-ccccccH------HHHHHHHHHhhcCCceeEEeeccc
Confidence 457899994 32 23333332 2222 3454 89999999 5554321 122222211 12234477889999
Q ss_pred ccCC
Q 029390 119 DYRG 122 (194)
Q Consensus 119 D~~~ 122 (194)
|-+.
T Consensus 115 EsRq 118 (306)
T KOG0373|consen 115 ESRQ 118 (306)
T ss_pred hhhh
Confidence 9874
No 135
>COG2047 Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]
Probab=48.52 E-value=42 Score=27.47 Aligned_cols=42 Identities=14% Similarity=0.185 Sum_probs=28.5
Q ss_pred eEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCc
Q 029390 39 LSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDN 80 (194)
Q Consensus 39 ~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~ 80 (194)
=-++++||++.+....|.++...+-+++++.....|..+|-.
T Consensus 85 Dliil~Gd~Q~~~~~gqyel~~~~Ld~a~e~g~~~IyTLGGy 126 (258)
T COG2047 85 DLIILVGDTQATSSEGQYELTGKILDIAKEFGARMIYTLGGY 126 (258)
T ss_pred cEEEEeccccccCcchhHHHHHHHHHHHHHcCCcEEEEecCc
Confidence 446777887654444566677776677777777788887774
No 136
>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase. Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).
Probab=46.98 E-value=22 Score=29.04 Aligned_cols=46 Identities=15% Similarity=0.287 Sum_probs=27.4
Q ss_pred EEEEcCCccccCCCC---CCCcHHHHHHhHhhhCCCCCCCceEEeccCcccCC
Q 029390 73 FIISTGDNFYDDGLT---GVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRG 122 (194)
Q Consensus 73 fvl~~GD~~Y~~G~~---~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~ 122 (194)
-++++||.++..|.. ..+-.+|.+..+++ .++..-...+|| |++-.
T Consensus 120 ~~lftGDtl~~~g~g~~~~~~~~~~~~Sl~~l---~~l~~~~~i~pG-H~~~~ 168 (248)
T TIGR03413 120 PALFCGDTLFSAGCGRLFEGTPEQMYDSLQRL---AALPDDTLVYCA-HEYTL 168 (248)
T ss_pred CEEEEcCccccCCcCCCCCCCHHHHHHHHHHH---HcCCCCeEEECC-CCchH
Confidence 489999999765432 11234555555543 234444567888 98753
No 137
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=46.19 E-value=9.9 Score=27.92 Aligned_cols=15 Identities=27% Similarity=0.281 Sum_probs=6.0
Q ss_pred HHHHHHHHHHhhhhc
Q 029390 5 LIITFIALLGSLYVF 19 (194)
Q Consensus 5 ~~~~~~~~~~~~~~~ 19 (194)
+|+|++++|.++.|+
T Consensus 6 ~iii~~i~l~~~~~~ 20 (130)
T PF12273_consen 6 AIIIVAILLFLFLFY 20 (130)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333444444443333
No 138
>PRK10241 hydroxyacylglutathione hydrolase; Provisional
Probab=42.53 E-value=26 Score=28.61 Aligned_cols=45 Identities=18% Similarity=0.313 Sum_probs=27.3
Q ss_pred EEEcCCccccCCCC--CC-CcHHHHHHhHhhhCCCCCCCceEEeccCcccCC
Q 029390 74 IISTGDNFYDDGLT--GV-DDAAFFESFVNIYTAPSLAKQWYNVLGNHDYRG 122 (194)
Q Consensus 74 vl~~GD~~Y~~G~~--~~-~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~~ 122 (194)
++++||.++..|.. .. +-.++.+..+.+ .++.......|| |++-.
T Consensus 122 ~lFtGDtlf~~g~gr~f~g~~~~~~~Sl~kl---~~l~~~t~i~pg-H~y~~ 169 (251)
T PRK10241 122 YLFCGDTLFSGGCGRLFEGTASQMYQSLKKI---NALPDDTLICCA-HEYTL 169 (251)
T ss_pred cEEEcCeeccCCcCCCCCCCHHHHHHHHHHH---HcCCCCEEEECC-CCChh
Confidence 69999998765432 11 223455555543 245555677788 99763
No 139
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=41.87 E-value=24 Score=30.31 Aligned_cols=42 Identities=21% Similarity=0.150 Sum_probs=23.7
Q ss_pred HHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccC
Q 029390 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGN 117 (194)
Q Consensus 62 ~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GN 117 (194)
+.++.++.+||+|+..||-. ..+.... ....+++|+..+=|=
T Consensus 59 ~~~~~~~~~Pd~Vlv~GD~~----------~~la~al----aA~~~~ipv~HieaG 100 (346)
T PF02350_consen 59 LADVLEREKPDAVLVLGDRN----------EALAAAL----AAFYLNIPVAHIEAG 100 (346)
T ss_dssp HHHHHHHHT-SEEEEETTSH----------HHHHHHH----HHHHTT-EEEEES--
T ss_pred HHHHHHhcCCCEEEEEcCCc----------hHHHHHH----HHHHhCCCEEEecCC
Confidence 44555678999999999976 2222121 113468998777553
No 140
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=37.86 E-value=58 Score=29.67 Aligned_cols=49 Identities=31% Similarity=0.581 Sum_probs=30.7
Q ss_pred HHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcccC
Q 029390 62 MGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHDYR 121 (194)
Q Consensus 62 ~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD~~ 121 (194)
+....++.-.|-.-.+||+. +.|+.. | ..++.... -.++.+.| ||||.-
T Consensus 182 la~~iqrLvVDhLHiVGDIy-DRGP~p--d-~Imd~L~~---yhsvDiQW----GNHDil 230 (648)
T COG3855 182 LAYLIQRLVVDHLHIVGDIY-DRGPYP--D-KIMDTLIN---YHSVDIQW----GNHDIL 230 (648)
T ss_pred HHHHHHHHhhhheeeecccc-cCCCCc--h-HHHHHHhh---cccccccc----cCcceE
Confidence 44445567789999999985 877653 1 22332222 24566666 999974
No 141
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=34.57 E-value=61 Score=28.82 Aligned_cols=66 Identities=14% Similarity=0.048 Sum_probs=32.8
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEecc
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLG 116 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~G 116 (194)
..++-|... .+...+..+++.+.+. +.--++.+||+. .-|.. ..++...+.+.. ...++-...+.|
T Consensus 327 ~~iIDDsYn---~nP~s~~aaL~~l~~~-~~r~i~VlG~m~-elG~~---~~~~h~~~~~~~--~~~~~d~v~~~G 392 (453)
T PRK10773 327 QLLLDDSYN---ANVGSMTAAAQVLAEM-PGYRVMVVGDMA-ELGAE---SEACHRQVGEAA--KAAGIDKVLSVG 392 (453)
T ss_pred eEEEEcCCC---CCHHHHHHHHHHHHhC-CCCEEEEECChh-hcchH---HHHHHHHHHHHH--HHcCCCEEEEEC
Confidence 456667332 2344555556554332 223578889987 44432 233444443322 233444555667
No 142
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=32.78 E-value=81 Score=26.03 Aligned_cols=55 Identities=13% Similarity=-0.004 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceEEeccCcc
Q 029390 54 NQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWYNVLGNHD 119 (194)
Q Consensus 54 ~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~~v~GNHD 119 (194)
+-+++...|.+.+++.+--.=++.||-.- |-..++++...++.+||+..+||=--
T Consensus 60 tLeeIi~~m~~a~~~Gk~VvRLhSGDpsi-----------YgA~~EQm~~L~~~gI~yevvPGVss 114 (254)
T COG2875 60 TLEEIIDLMVDAVREGKDVVRLHSGDPSI-----------YGALAEQMRELEALGIPYEVVPGVSS 114 (254)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCChhH-----------HHHHHHHHHHHHHcCCCeEEeCCchH
Confidence 34556666666666656566899999751 11223333233578999999999543
No 143
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=31.78 E-value=63 Score=27.91 Aligned_cols=46 Identities=22% Similarity=0.187 Sum_probs=27.9
Q ss_pred HHHHHhhhcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCCCCCCCceE-EeccCccc
Q 029390 61 QMGIVGEKLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTAPSLAKQWY-NVLGNHDY 120 (194)
Q Consensus 61 ~~~~~~~~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~~~l~iP~~-~v~GNHD~ 120 (194)
.+.++.++.+||+|+..||-. ..+.... ....+++|+. .--|++-+
T Consensus 84 ~~~~~~~~~~Pd~vlv~GD~~----------~~la~al----aA~~~~IPv~HveaG~rs~ 130 (365)
T TIGR03568 84 GFSDAFERLKPDLVVVLGDRF----------EMLAAAI----AAALLNIPIAHIHGGEVTE 130 (365)
T ss_pred HHHHHHHHhCCCEEEEeCCch----------HHHHHHH----HHHHhCCcEEEEECCccCC
Confidence 344555678999999999975 1121111 1234678988 55566643
No 144
>PF07265 TAP35_44: Tapetum specific protein TAP35/TAP44; InterPro: IPR009891 This family consists of several plant tapetum specific proteins. Members of this family are found in Arabidopsis thaliana, Brassica napus and Sinapis alba. Members of this family may be involved in sporopollenin formation and/or deposition [].
Probab=30.98 E-value=54 Score=23.34 Aligned_cols=25 Identities=20% Similarity=0.235 Sum_probs=14.8
Q ss_pred hhHHHHHHHHHHhhhhccccCCCCC
Q 029390 3 LTLIITFIALLGSLYVFCPSSAELP 27 (194)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~ 27 (194)
|.||+.+++.+..--.+|.|+.++|
T Consensus 10 lcLlll~~ff~sS~pa~slR~pk~q 34 (119)
T PF07265_consen 10 LCLLLLVVFFLSSQPALSLRSPKPQ 34 (119)
T ss_pred HHHHHHHHHHHcCchhhhhcCCccc
Confidence 5556655555555555556666666
No 145
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=30.82 E-value=55 Score=28.86 Aligned_cols=22 Identities=27% Similarity=0.336 Sum_probs=17.8
Q ss_pred HHHHHHhhhcCccEEEEcCCcc
Q 029390 60 HQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 60 ~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
..+.++.++.+||.|+..||-.
T Consensus 82 ~~~~~vl~~~kPD~VlVhGDT~ 103 (383)
T COG0381 82 EGLSKVLEEEKPDLVLVHGDTN 103 (383)
T ss_pred HHHHHHHHhhCCCEEEEeCCcc
Confidence 3456667788999999999975
No 146
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=29.99 E-value=32 Score=16.53 Aligned_cols=8 Identities=25% Similarity=0.688 Sum_probs=3.3
Q ss_pred hhHHHHHH
Q 029390 3 LTLIITFI 10 (194)
Q Consensus 3 ~~~~~~~~ 10 (194)
++.+++++
T Consensus 4 ~vIIlvvL 11 (19)
T PF13956_consen 4 LVIILVVL 11 (19)
T ss_pred ehHHHHHH
Confidence 34444433
No 147
>PF11980 DUF3481: Domain of unknown function (DUF3481); InterPro: IPR022579 This domain of unknown function is located in the C terminus of the eukaryotic neuropilin receptor family of proteins. It is found in association with PF00754 from PFAM, PF00431 from PFAM and PF00629 from PFAM. There are two completely conserved residues (Y and E) that may be functionally important.
Probab=29.78 E-value=60 Score=22.24 Aligned_cols=19 Identities=21% Similarity=0.167 Sum_probs=12.3
Q ss_pred hhHHHHHHHHHHhhhhccc
Q 029390 3 LTLIITFIALLGSLYVFCP 21 (194)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~ 21 (194)
+.++|+.|.++.+++|-|.
T Consensus 25 a~llL~~v~l~vvL~C~r~ 43 (87)
T PF11980_consen 25 ALLLLVAVCLGVVLYCHRF 43 (87)
T ss_pred HHHHHHHHHHHHHHhhhhh
Confidence 4556666677777887544
No 148
>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=28.40 E-value=50 Score=18.99 Aligned_cols=28 Identities=14% Similarity=0.456 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHhhhhccccCCCCCCccCCC
Q 029390 3 LTLIITFIALLGSLYVFCPSSAELPWFEHPA 33 (194)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (194)
|++++.+++....++|++ -++|....|.
T Consensus 14 l~~llflv~imliif~f~---le~qdl~epc 41 (43)
T PF11395_consen 14 LSFLLFLVIIMLIIFWFS---LEIQDLNEPC 41 (43)
T ss_pred HHHHHHHHHHHHHHHHHH---Hhhhhhcccc
Confidence 455555556666667763 4566665553
No 149
>PF09049 SNN_transmemb: Stannin transmembrane; InterPro: IPR015135 This region consists of a single highly hydrophobic transmembrane helix that transverses the lipid bilayer at a 20 degree angle with respect to the membrane normal. It contains a conserved cysteine residue (Cys32) that, together with Cys34 found in the stannin unstructured linker domain, constitutes the putative trimethyltin-binding site that resides at the end of the transmembrane domain close to the lipid/solvent interface []. ; PDB: 1ZZA_A.
Probab=28.25 E-value=63 Score=17.61 Aligned_cols=16 Identities=38% Similarity=0.652 Sum_probs=9.5
Q ss_pred HHHHHHHHHHhhhhcc
Q 029390 5 LIITFIALLGSLYVFC 20 (194)
Q Consensus 5 ~~~~~~~~~~~~~~~~ 20 (194)
.+++.++++.++.|.|
T Consensus 17 viliavaalg~licgc 32 (33)
T PF09049_consen 17 VILIAVAALGALICGC 32 (33)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhhhheec
Confidence 3445556677777653
No 150
>PF01470 Peptidase_C15: Pyroglutamyl peptidase This is family C15 in the peptidase classification. ; InterPro: IPR000816 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C15 (pyroglutamyl peptidase I, clan CF). The type example being pyroglutamyl peptidase I of Bacillus amyloliquefaciens. Pyroglutamyl/pyrrolidone carboxyl peptidase (Pcp or PYRase) is an exopeptidase that hydrolytically removes the pGlu from pGlu-peptides or pGlu-proteins [, ]. PYRase has been found in prokaryotes and eukaryotes where at least two different classes have been characterised: the first containing bacterial and animal type I PYRases, and the second containing animal type II and serum PYRases. Type I and bacterial PYRases are soluble enzymes, while type II PYRases are membrane-bound. The primary application of PYRase has been its utilisation for protein or peptide sequencing, and bacterial diagnosis []. The conserved residues Cys-144 and His-168 have been identified by inhibition and mutagenesis studies [, ].; GO: 0006508 proteolysis; PDB: 1A2Z_A 1IU8_A 3RNZ_A 3RO0_D 1AUG_D 2EBJ_A 3LAC_A 1X12_B 1Z8X_B 1X10_C ....
Probab=27.60 E-value=54 Score=26.02 Aligned_cols=24 Identities=21% Similarity=0.216 Sum_probs=15.3
Q ss_pred HHHHHHHHHhhhcCccEEEEcCCc
Q 029390 57 KVAHQMGIVGEKLKIDFIISTGDN 80 (194)
Q Consensus 57 ~v~~~~~~~~~~~~pdfvl~~GD~ 80 (194)
.+.+.+.++.++.+||+||++|=-
T Consensus 47 ~~~~~l~~~l~~~~PdlVIhlGva 70 (202)
T PF01470_consen 47 KAFEALEELLEEHQPDLVIHLGVA 70 (202)
T ss_dssp HHHHHHHHHHHHH--SEEEEEEE-
T ss_pred hHHHHHHHHHHhcCCcEEEEEeec
Confidence 445566665666799999999964
No 151
>COG2237 Predicted membrane protein [Function unknown]
Probab=27.33 E-value=1.5e+02 Score=25.87 Aligned_cols=45 Identities=20% Similarity=0.158 Sum_probs=32.4
Q ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 37 GSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 37 ~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
....+++++--+..+...+..++++++++..+.+||.++.+.|=.
T Consensus 65 eDveIA~vsG~~~vgv~sd~~l~~qld~vl~~~~pd~av~VsDGa 109 (364)
T COG2237 65 EDVEIAVVSGDKDVGVESDLKLSEQLDEVLSELDPDDAVVVSDGA 109 (364)
T ss_pred CceEEEEEecCCCcchhhHHHHHHHHHHHHHcCCCcEEEEeccCc
Confidence 466666665433323345677888898888889999999999844
No 152
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=27.18 E-value=3.9e+02 Score=24.30 Aligned_cols=85 Identities=18% Similarity=0.107 Sum_probs=51.4
Q ss_pred CCCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHhh---hcCccEEEEcCCccccCCCCCCCcHHHHHHhHhhhCC----CC
Q 029390 34 KPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGE---KLKIDFIISTGDNFYDDGLTGVDDAAFFESFVNIYTA----PS 106 (194)
Q Consensus 34 ~~~~~~~f~~igD~g~~~~~~~~~v~~~~~~~~~---~~~pdfvl~~GD~~Y~~G~~~~~d~~~~~~~~~~~~~----~~ 106 (194)
+.....+|+.++|.+. ++..+.+++.++-+ ...|..+|+.|-+.-..--.+ ...++.+.|.-+.+. .+
T Consensus 278 ~~~~d~~fVfLSdV~L----D~~~vm~aL~kifqgy~~~pP~~iIlcG~FtS~p~~~~-s~~~~k~~f~~LA~~l~~~~~ 352 (525)
T KOG3818|consen 278 AENTDTSFVFLSDVFL----DDKKVMEALRKIFQGYKDAPPTAIILCGSFTSSPRQTS-SSDQLKDGFRWLAAQLTCFRK 352 (525)
T ss_pred HhCcCceEEEEehhcc----ccHHHHHHHHHHHhhccCCCCeEEEEeccccccccccc-hHHHHHHHHHHHHhhcccccc
Confidence 4566788999999875 44555555555432 356788999999873211111 223444455433211 11
Q ss_pred C--CCceEEeccCcccCCC
Q 029390 107 L--AKQWYNVLGNHDYRGD 123 (194)
Q Consensus 107 l--~iP~~~v~GNHD~~~~ 123 (194)
. +..+..|||=.|-+.+
T Consensus 353 ~~ekT~fIFVPGP~Dp~~~ 371 (525)
T KOG3818|consen 353 DYEKTQFIFVPGPNDPWVD 371 (525)
T ss_pred ccccceEEEecCCCCCCcC
Confidence 1 4579999999998765
No 153
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=26.20 E-value=2.3e+02 Score=19.69 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 56 TKVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 56 ~~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
+++.+.+.++.++.+...|+.+-+++
T Consensus 30 ee~~~~l~~l~~~~d~gII~Ite~~~ 55 (100)
T PRK02228 30 EKLDEAVEEVLEDDDVGILVMHDDDL 55 (100)
T ss_pred HHHHHHHHHHhhCCCEEEEEEehhHh
Confidence 55677788775566778888888876
No 154
>PRK10834 vancomycin high temperature exclusion protein; Provisional
Probab=25.80 E-value=3.8e+02 Score=22.05 Aligned_cols=16 Identities=25% Similarity=0.501 Sum_probs=12.4
Q ss_pred hhhcCccEEEEcCCcc
Q 029390 66 GEKLKIDFIISTGDNF 81 (194)
Q Consensus 66 ~~~~~pdfvl~~GD~~ 81 (194)
-++.+...+|..||+.
T Consensus 77 Yk~gk~~~ilvSGg~~ 92 (239)
T PRK10834 77 YNSGKVNYLLLSGDNA 92 (239)
T ss_pred HHhCCCCEEEEeCCCC
Confidence 3456778899999974
No 155
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.01 E-value=64 Score=24.82 Aligned_cols=39 Identities=23% Similarity=0.242 Sum_probs=26.5
Q ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 41 FLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 41 f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
++++||+|.+.. ..++...++++.-..+..-|+.+|.+.
T Consensus 3 vL~lgD~HiP~R--a~~Lp~KFkklLvPgki~hilctGNlc 41 (183)
T KOG3325|consen 3 VLVLGDLHIPHR--ANDLPAKFKKLLVPGKIQHILCTGNLC 41 (183)
T ss_pred EEEeccccCCcc--ccccCHHHHhccCCCceeEEEEeCCcc
Confidence 578999997532 234555666655456778889999876
No 156
>PRK13193 pyrrolidone-carboxylate peptidase; Provisional
Probab=25.01 E-value=83 Score=25.24 Aligned_cols=24 Identities=13% Similarity=0.087 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhhcCccEEEEcCCc
Q 029390 57 KVAHQMGIVGEKLKIDFIISTGDN 80 (194)
Q Consensus 57 ~v~~~~~~~~~~~~pdfvl~~GD~ 80 (194)
...+.+.+..++.+||+||++|=.
T Consensus 47 ~~~~~l~~~~~~~~Pd~vl~~G~a 70 (209)
T PRK13193 47 KIEDLIVTKIREMKPILTLGIGVA 70 (209)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccc
Confidence 345556655566799999999964
No 157
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=24.43 E-value=2.6e+02 Score=22.80 Aligned_cols=47 Identities=23% Similarity=0.281 Sum_probs=30.6
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCccccCCCC
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLT 87 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~~Y~~G~~ 87 (194)
.+.+-++|- |. ..+.+.+.+...+..++.+||||+..|=|--..|+.
T Consensus 31 di~vrVvgs-ga--KM~Pe~veaav~~~~e~~~pDfvi~isPNpaaPGP~ 77 (277)
T COG1927 31 DIEVRVVGS-GA--KMDPECVEAAVTEMLEEFNPDFVIYISPNPAAPGPK 77 (277)
T ss_pred CceEEEecc-cc--ccChHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCch
Confidence 344445554 21 124455666666777888999999999988655543
No 158
>PRK13195 pyrrolidone-carboxylate peptidase; Provisional
Probab=23.84 E-value=89 Score=25.38 Aligned_cols=21 Identities=10% Similarity=0.123 Sum_probs=15.6
Q ss_pred HHHHHHhhhcCccEEEEcCCc
Q 029390 60 HQMGIVGEKLKIDFIISTGDN 80 (194)
Q Consensus 60 ~~~~~~~~~~~pdfvl~~GD~ 80 (194)
+.+.++.++.+||+||++|=-
T Consensus 51 ~~l~~~i~~~~Pd~Vi~~G~a 71 (222)
T PRK13195 51 AAAQQAIAEIEPALVIMLGEY 71 (222)
T ss_pred HHHHHHHHHHCCCEEEEeCcc
Confidence 345555567799999999964
No 159
>PRK13194 pyrrolidone-carboxylate peptidase; Provisional
Probab=22.81 E-value=92 Score=24.95 Aligned_cols=25 Identities=20% Similarity=0.238 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 57 KVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 57 ~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
.+.+.+.++.++.+||+||++|--.
T Consensus 47 ~~~~~l~~~l~~~~Pd~vlhlG~a~ 71 (208)
T PRK13194 47 RAREELEKVLDEIKPDITINLGLAP 71 (208)
T ss_pred hHHHHHHHHHHHhCCCEEEEeeccC
Confidence 3445565655667999999999753
No 160
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=22.53 E-value=2.3e+02 Score=18.44 Aligned_cols=39 Identities=13% Similarity=0.262 Sum_probs=26.0
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEEEcCCc
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDN 80 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl~~GD~ 80 (194)
..++++.|-- ...+...+...++++.++ .|+.+|..|.-
T Consensus 3 g~rVli~GgR---~~~D~~~i~~~Ld~~~~~-~~~~~lvhGga 41 (71)
T PF10686_consen 3 GMRVLITGGR---DWTDHELIWAALDKVHAR-HPDMVLVHGGA 41 (71)
T ss_pred CCEEEEEECC---ccccHHHHHHHHHHHHHh-CCCEEEEECCC
Confidence 4577888873 323556677788887655 57887777764
No 161
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=21.98 E-value=2e+02 Score=21.42 Aligned_cols=28 Identities=14% Similarity=0.270 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 54 NQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 54 ~~~~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
+.+.+.+.+++..++.+.|+|+.+|-.-
T Consensus 45 d~~~i~~~l~~~~~~~~~DlVittGG~s 72 (152)
T cd00886 45 DKDEIREALIEWADEDGVDLILTTGGTG 72 (152)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 3455666676655433789999999865
No 162
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=21.94 E-value=1.1e+02 Score=25.95 Aligned_cols=28 Identities=18% Similarity=0.313 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhhcCccEEEEcCCccc
Q 029390 55 QTKVAHQMGIVGEKLKIDFIISTGDNFY 82 (194)
Q Consensus 55 ~~~v~~~~~~~~~~~~pdfvl~~GD~~Y 82 (194)
+++.++.+.++.++.+||.++.+|==.+
T Consensus 139 E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 139 EKEQPEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred hHHhhHHHHHHHHHcCCCEEEEeCchhh
Confidence 4455667778888899999999995443
No 163
>PF07213 DAP10: DAP10 membrane protein; InterPro: IPR009861 This family consists of several mammalian DAP10 membrane proteins. In activated mouse natural killer (NK) cells, the NKG2D receptor associates with two intracellular adaptors, DAP10 and DAP12, which trigger phosphatidyl inositol 3 kinase (PI3K) and Syk family protein tyrosine kinases, respectively. It has been suggested that the DAP10-PI3K pathway is sufficient to initiate NKG2D-mediated killing of target cells [].
Probab=21.69 E-value=98 Score=20.96 Aligned_cols=18 Identities=22% Similarity=0.453 Sum_probs=11.8
Q ss_pred HHHHHHHHHhhhhccccC
Q 029390 6 IITFIALLGSLYVFCPSS 23 (194)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (194)
++++++++++-+|.+.++
T Consensus 45 vlTLLIv~~vy~car~r~ 62 (79)
T PF07213_consen 45 VLTLLIVLVVYYCARPRR 62 (79)
T ss_pred HHHHHHHHHHHhhccccc
Confidence 455666777778866543
No 164
>PRK13196 pyrrolidone-carboxylate peptidase; Provisional
Probab=21.27 E-value=1e+02 Score=24.65 Aligned_cols=22 Identities=14% Similarity=0.161 Sum_probs=16.7
Q ss_pred HHHHHHHHhhhcCccEEEEcCC
Q 029390 58 VAHQMGIVGEKLKIDFIISTGD 79 (194)
Q Consensus 58 v~~~~~~~~~~~~pdfvl~~GD 79 (194)
..+.+.++.++.+||+||++|=
T Consensus 49 ~~~~l~~~~~~~~Pd~vi~~G~ 70 (211)
T PRK13196 49 AMAALSRLLDELQPSAVLLTGL 70 (211)
T ss_pred HHHHHHHHHHHhCCCEEEEecc
Confidence 4455666666789999999995
No 165
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=21.22 E-value=1.2e+02 Score=25.15 Aligned_cols=17 Identities=24% Similarity=0.331 Sum_probs=13.7
Q ss_pred CCCceEEeccCcccCCC
Q 029390 107 LAKQWYNVLGNHDYRGD 123 (194)
Q Consensus 107 l~iP~~~v~GNHD~~~~ 123 (194)
++.-+.+..||||...+
T Consensus 126 inknvvvlagnhein~n 142 (318)
T PF13258_consen 126 INKNVVVLAGNHEINFN 142 (318)
T ss_pred cccceEEEecCceeccC
Confidence 46679999999998753
No 166
>PF05902 4_1_CTD: 4.1 protein C-terminal domain (CTD); InterPro: IPR008379 There is a unique sequence domain at the C terminus of all known 4.1 proteins, known as the C-terminal domain (CTD). Mammalian CTDs are associated with a growing number of protein-protein interactions, although such activities have yet to be associated with invertebrate CTDs. Mammalian CTDs are generally defined by sequence alignment as encoded by exons 18-21. Comparison of known vertebrate 4.1 proteins with invertebrate 4.1 proteins indicates that mammalian 4.1 exon 19 represents a vertebrate adaptation that extends the sequence of the CTD with a Ser/Thr-rich sequence. The CTD was first described as a 22/24 kDa domain by chymotryptic digestion of erythrocyte 4.1 (4.1R). CTD is thought to represent an independent folding structure which has gained function since the divergence of vertebrates from invertebrates [].; GO: 0003779 actin binding, 0005198 structural molecule activity, 0005856 cytoskeleton
Probab=20.92 E-value=1.9e+02 Score=20.95 Aligned_cols=34 Identities=12% Similarity=0.228 Sum_probs=22.0
Q ss_pred CeEEEEEeCCCCCCCCCHHHHHHHHHHHhhhcCccEEE
Q 029390 38 SLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFII 75 (194)
Q Consensus 38 ~~~f~~igD~g~~~~~~~~~v~~~~~~~~~~~~pdfvl 75 (194)
+-|+++-|| ........+++++.+. ++..||+-+
T Consensus 70 EKRIvITGD---~DIDhDqaLa~aI~eA-k~q~Pdm~V 103 (114)
T PF05902_consen 70 EKRIVITGD---ADIDHDQALAQAIKEA-KEQHPDMSV 103 (114)
T ss_pred EEEEEEecC---CCcchHHHHHHHHHHH-HHhCCCceE
Confidence 578999999 3322235677777664 455788743
No 167
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=20.63 E-value=2.1e+02 Score=21.67 Aligned_cols=28 Identities=14% Similarity=0.130 Sum_probs=19.8
Q ss_pred CHHHHHHHHHHHhhhcCccEEEEcCCcc
Q 029390 54 NQTKVAHQMGIVGEKLKIDFIISTGDNF 81 (194)
Q Consensus 54 ~~~~v~~~~~~~~~~~~pdfvl~~GD~~ 81 (194)
+...+.+.+.+..+..+.|.||.+|-.-
T Consensus 47 d~~~i~~~l~~~~~~~~~DlVIttGGtg 74 (163)
T TIGR02667 47 DIYQIRAQVSAWIADPDVQVILITGGTG 74 (163)
T ss_pred CHHHHHHHHHHHHhcCCCCEEEECCCcC
Confidence 3455667776654435789999999865
Done!