Query 029395
Match_columns 194
No_of_seqs 172 out of 750
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 20:05:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029395.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029395hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jon_A Beta-1,3-glucanase; oli 100.0 6.3E-36 2.2E-40 228.0 10.2 90 3-92 10-99 (101)
2 2w61_A GAS2P, glycolipid-ancho 99.9 1.7E-26 5.7E-31 217.9 1.2 88 3-92 395-494 (555)
3 1efe_A Mini-proinsulin, M2PI; 27.5 50 0.0017 22.1 3.0 39 15-53 8-58 (60)
4 1b9g_A Protein (growth factor 23.6 49 0.0017 22.1 2.3 36 16-53 8-47 (57)
5 3lri_A Protein (insulin-like g 20.8 59 0.002 23.3 2.4 38 16-53 21-73 (83)
6 1igl_A Insulin-like growth fac 16.4 1.2E+02 0.0041 20.6 3.1 38 16-53 11-59 (67)
7 1bqt_A Somatomedin C, insulin- 14.9 1E+02 0.0036 21.1 2.5 13 16-28 8-20 (70)
8 2gsv_A Hypothetical protein YV 14.4 65 0.0022 22.7 1.3 9 53-61 28-36 (80)
9 2v33_A E1 envelope glycoprotei 14.1 28 0.00094 25.6 -0.7 23 70-92 20-42 (91)
10 2kqp_A Insulin; carbohydrate m 14.1 1.5E+02 0.0051 20.8 3.2 14 15-28 8-21 (86)
No 1
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea}
Probab=100.00 E-value=6.3e-36 Score=228.02 Aligned_cols=90 Identities=48% Similarity=1.008 Sum_probs=86.9
Q ss_pred CCcceeecCCCChHHHHHHHHHhcCCCCCCcccCCCCCccCCCCcchhhhHHHHHHHHHhCCCCCCCCCCCceEEEecCC
Q 029395 3 AANWCVCKDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQRKGQAQGSCDFSGSATVATTDP 82 (194)
Q Consensus 3 ~slwCVak~~~~~~~lq~~ldyACg~gvDCs~I~~nG~cyspct~~~~lSyA~N~YYq~~~~~~~aCdF~G~Atv~t~dP 82 (194)
.++|||+|+++++++||++|||||++++||++|++|++||+||++++|||||||+|||++++..++|||+|.|+|++.||
T Consensus 10 ~~~wCVak~~~~~~~l~~~ldyACg~gaDC~~I~~gg~Cy~p~t~~~haSyAfN~YYq~~~~~~~aCdF~G~A~it~~dP 89 (101)
T 2jon_A 10 AGSWCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRNSWNCDFSQTATLTNTNP 89 (101)
T ss_dssp CSCEEEECTTSCHHHHHHHHHHHTTTSSSSSTTCCCSSSCSSCCTTHHHHHHHHHHHHHHTSSGGGCCSCSSEEEESSCC
T ss_pred CCcEEEECCCCCHHHHHHHHHHHcCCCCCccccCcCCcccCCCCHHHHHHHHHHHHHHHcCCCCCccCCCCeEEEeecCC
Confidence 57899999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccc
Q 029395 83 STAGCSYPSS 92 (194)
Q Consensus 83 S~~sC~f~~~ 92 (194)
|.++|+|+..
T Consensus 90 S~g~C~f~~~ 99 (101)
T 2jon_A 90 SYGACNFPSG 99 (101)
T ss_dssp CCSSSCCCCS
T ss_pred CCCceecCCC
Confidence 9999999863
No 2
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A*
Probab=99.92 E-value=1.7e-26 Score=217.93 Aligned_cols=88 Identities=16% Similarity=0.292 Sum_probs=83.3
Q ss_pred CCcceeecCC-CChHHHHHHHHHhcCCCCCCcccCCCCC-----ccCCCCcchhhhHHHHHHHHHhCCCCCCCCCCCc--
Q 029395 3 AANWCVCKDG-VGDPVLQKALDYACGAGADCNPIHSNGP-----CYNPNTVKAHCSYAVNSYFQRKGQAQGSCDFSGS-- 74 (194)
Q Consensus 3 ~slwCVak~~-~~~~~lq~~ldyACg~gvDCs~I~~nG~-----cyspct~~~~lSyA~N~YYq~~~~~~~aCdF~G~-- 74 (194)
+++|||+|++ +++++||++|||||++ +||++|++||+ ||+||++++|||||||+|||+++++.++|||+|.
T Consensus 395 ~~~~Cv~~~~~~~~~~l~~~~~yaC~~-~dC~~I~~~g~~g~yG~~~~~~~~~~~Sya~n~yyq~~~~~~~~C~F~g~~~ 473 (555)
T 2w61_A 395 EILPCEIVPFGAESGKYEEYFSYLCSK-VDCSDILANGKTGEYGEFSDCSVEQKLSLQLSKLYCKIGANDRHCPLNDKNV 473 (555)
T ss_dssp HHCSEEECCTTCCGGGHHHHHHHHTTT-SCGGGGCEETTTTEECTTTTSCHHHHHHHHHHHHHHHHCCCSSCCSCCCTTE
T ss_pred cCCeeecCCCCCCHHHHHHHHHHHhCc-CCCccccCCCcCCCccccCCCCHHHHHHHHHHHHHHHcCCCCCCCCCCCCcc
Confidence 4689999999 9999999999999998 89999999999 6999999999999999999999999999999999
Q ss_pred ----eEEEecCCCCCccccccc
Q 029395 75 ----ATVATTDPSTAGCSYPSS 92 (194)
Q Consensus 75 ----Atv~t~dPS~~sC~f~~~ 92 (194)
|+++ .+|+.++|+|+.+
T Consensus 474 ~~~~a~~~-~~~s~~~C~~~~~ 494 (555)
T 2w61_A 474 YFNLESLQ-PLTSESICKNVFD 494 (555)
T ss_dssp EECGGGGS-CCCTTCTTHHHHH
T ss_pred cccceEEE-eCCCCCchHhHHH
Confidence 9998 7889999997754
No 3
>1efe_A Mini-proinsulin, M2PI; linker, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=27.52 E-value=50 Score=22.12 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=24.8
Q ss_pred hHHHHHHHHHhcCC-CCCCcccC-------CCCC----ccCCCCcchhhhH
Q 029395 15 DPVLQKALDYACGA-GADCNPIH-------SNGP----CYNPNTVKAHCSY 53 (194)
Q Consensus 15 ~~~lq~~ldyACg~-gvDCs~I~-------~nG~----cyspct~~~~lSy 53 (194)
-.+|-++|.++|+. +..=.+.. ..|- |+.+|++.+-.+|
T Consensus 8 G~~L~daL~~vC~~rgf~~~p~~rr~~~r~~RGIvdECC~~~Ct~~~L~~Y 58 (60)
T 1efe_A 8 GSHLVEALYLVCGERGFFYTPKTRRYPGDVKRGIVEQCCTSICSLYQLENY 58 (60)
T ss_dssp HHHHHHHHHHHHCSSCCCCCCCCCSSSCTTCCSHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCcCCcccCCccccccCCCCCCcHhhcCCCCCChHHHHHh
Confidence 36899999999986 32112221 1122 8999988776655
No 4
>1b9g_A Protein (growth factor IGF-1); NMR {Homo sapiens} SCOP: g.1.1.1
Probab=23.55 E-value=49 Score=22.13 Aligned_cols=36 Identities=22% Similarity=0.463 Sum_probs=24.3
Q ss_pred HHHHHHHHHhcCCCCCCcccCCCCC----ccCCCCcchhhhH
Q 029395 16 PVLQKALDYACGAGADCNPIHSNGP----CYNPNTVKAHCSY 53 (194)
Q Consensus 16 ~~lq~~ldyACg~gvDCs~I~~nG~----cyspct~~~~lSy 53 (194)
.+|-++|.++|+...- -....|- |+.+|++.+-.+|
T Consensus 8 ~~L~~aL~~vC~~rgf--~~~k~GIvdECC~~~Ct~~~L~~Y 47 (57)
T 1b9g_A 8 AELVDALQFVCGDRGF--YFNKPGIVDECCFRSCDLRRLEMY 47 (57)
T ss_dssp TTHHHHHHTTCSSSSC--CTTCCSHHHHHTTSSCCSSSGGGT
T ss_pred HHHHHHHHHHHcCCCc--cCCCCCcHhhhcCCCCCHHHHHHh
Confidence 5788999999986210 0112232 8999998887766
No 5
>3lri_A Protein (insulin-like growth factor I); protein structure, distance geometry; NMR {Homo sapiens} SCOP: g.1.1.1
Probab=20.83 E-value=59 Score=23.32 Aligned_cols=38 Identities=29% Similarity=0.593 Sum_probs=23.2
Q ss_pred HHHHHHHHHhcCC-CCCCc-cc---------CCCCC----ccCCCCcchhhhH
Q 029395 16 PVLQKALDYACGA-GADCN-PI---------HSNGP----CYNPNTVKAHCSY 53 (194)
Q Consensus 16 ~~lq~~ldyACg~-gvDCs-~I---------~~nG~----cyspct~~~~lSy 53 (194)
.+|-++|.++|+. +..=+ +- ...|- ||.+|++.+-.+|
T Consensus 21 ~~LvdaL~~VCg~rGf~~~~p~~~g~~~rR~~krGIVdECC~~~Csl~~Le~Y 73 (83)
T 3lri_A 21 AELVDALQFVCGDRGFYFNKPTGYGSSSRRACQTGIVDECCFRSCDLRRLEMY 73 (83)
T ss_dssp THHHHHHHHHHHTTCCCSSCCCSBTTBSSSCSTTCTTHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHhCcCceeecCCcccCCccccccCCCchHHhCCCCCCHHHHHHh
Confidence 6799999999975 22111 10 11122 7888888776655
No 6
>1igl_A Insulin-like growth factor II; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 2l29_B 2v5p_C* 3e4z_C 3kr3_D
Probab=16.35 E-value=1.2e+02 Score=20.61 Aligned_cols=38 Identities=26% Similarity=0.558 Sum_probs=23.6
Q ss_pred HHHHHHHHHhcCC-CCCCc-cc-----CCCCC----ccCCCCcchhhhH
Q 029395 16 PVLQKALDYACGA-GADCN-PI-----HSNGP----CYNPNTVKAHCSY 53 (194)
Q Consensus 16 ~~lq~~ldyACg~-gvDCs-~I-----~~nG~----cyspct~~~~lSy 53 (194)
.+|-++|.++|+. +..=. +- ...|- |+.+|++.+-.+|
T Consensus 11 ~~L~daL~~vC~~rgf~~~~p~~~~~Rr~rGIVdECC~~~Ct~~~L~~Y 59 (67)
T 1igl_A 11 GELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETY 59 (67)
T ss_dssp TTTHHHHHHHTCTTCBCSCCCCCSSSSCCCCTTCCCCCSCCCSHHHHHH
T ss_pred HHHHHHHHHHHccCCcccCCCCcccccccCCcHHHhcCCCCCHHHHHHH
Confidence 5688999999984 32111 10 01121 8999988876666
No 7
>1bqt_A Somatomedin C, insulin-like growth factor-I; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 1gzr_B* 1gzy_B* 1gzz_B* 1h02_B* 1h59_A 1imx_A* 1pmx_A 1wqj_I 2dsp_I 2dsq_I 2dsr_I 2gf1_A 3gf1_A
Probab=14.92 E-value=1e+02 Score=21.07 Aligned_cols=13 Identities=38% Similarity=0.813 Sum_probs=10.9
Q ss_pred HHHHHHHHHhcCC
Q 029395 16 PVLQKALDYACGA 28 (194)
Q Consensus 16 ~~lq~~ldyACg~ 28 (194)
.+|-++|.++|+.
T Consensus 8 ~~L~daL~~vC~~ 20 (70)
T 1bqt_A 8 AELVDALQFVCGD 20 (70)
T ss_dssp STTHHHHHHHSCS
T ss_pred HHHHHHHHHHhCC
Confidence 4678899999986
No 8
>2gsv_A Hypothetical protein YVFG; alpha-helical protein, structural genomics, PSI, protein structure initiative; 1.90A {Bacillus subtilis} SCOP: a.23.7.1 PDB: 2js1_A
Probab=14.43 E-value=65 Score=22.69 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.6
Q ss_pred HHHHHHHHH
Q 029395 53 YAVNSYFQR 61 (194)
Q Consensus 53 yA~N~YYq~ 61 (194)
-|||+||+.
T Consensus 28 hAmNaYYrs 36 (80)
T 2gsv_A 28 HAMNSYYRS 36 (80)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 589999985
No 9
>2v33_A E1 envelope glycoprotein; transmembrane, viral protein; 1.55A {Semliki forest virus} SCOP: b.1.18.4
Probab=14.10 E-value=28 Score=25.62 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=18.5
Q ss_pred CCCCceEEEecCCCCCccccccc
Q 029395 70 DFSGSATVATTDPSTAGCSYPSS 92 (194)
Q Consensus 70 dF~G~Atv~t~dPS~~sC~f~~~ 92 (194)
||+|.|.|.......++|..++.
T Consensus 20 DFGGvatl~Y~a~k~GkCaVHs~ 42 (91)
T 2v33_A 20 DFGGVLTLTYKTNKNGDCSVHSH 42 (91)
T ss_dssp EEEEEEEEEEEESSCEEEEEECC
T ss_pred CCCCeEEEEEecCCCccceeecc
Confidence 89999999976667799985544
No 10
>2kqp_A Insulin; carbohydrate metabolism, cleavage on PAIR of BAS residues, diabetes mellitus, disease mutation, disulfide BO glucose metabolism, hormone; NMR {Homo sapiens}
Probab=14.08 E-value=1.5e+02 Score=20.78 Aligned_cols=14 Identities=36% Similarity=0.551 Sum_probs=11.7
Q ss_pred hHHHHHHHHHhcCC
Q 029395 15 DPVLQKALDYACGA 28 (194)
Q Consensus 15 ~~~lq~~ldyACg~ 28 (194)
-.+|-++|.++|+.
T Consensus 8 G~~L~daL~~vC~~ 21 (86)
T 2kqp_A 8 GSDLVEALYLVCGE 21 (86)
T ss_dssp HHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHcc
Confidence 36799999999983
Done!