Query 029395
Match_columns 194
No_of_seqs 172 out of 750
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 20:05:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029395.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/029395hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wqji1 g.1.1.1 (I:2-63) Insul 48.0 5.2 0.00038 25.9 2.3 38 16-53 7-59 (62)
2 d2v5pc1 g.1.1.1 (C:6-63) Insul 44.9 8.5 0.00062 24.5 3.0 38 16-53 6-54 (58)
3 d2gsva1 a.23.7.1 (A:3-69) Hypo 16.7 25 0.0018 22.6 1.3 9 53-61 26-34 (67)
4 d2v33a1 b.1.18.4 (A:293-382) F 14.1 13 0.00095 25.6 -0.7 23 70-92 19-41 (90)
5 g1mso.1 g.1.1.1 (B:,A:) Insuli 14.0 37 0.0027 20.9 1.5 40 12-53 5-49 (51)
6 d2dlka1 g.37.1.1 (A:8-37) Zinc 10.8 42 0.003 18.2 0.9 12 68-79 2-13 (30)
7 d1nkla_ a.64.1.1 (A:) NK-lysin 9.0 1.5E+02 0.011 17.8 3.4 37 10-61 19-55 (78)
8 d1iq0a1 a.27.1.1 (A:467-592) A 8.8 57 0.0042 22.2 1.3 29 45-73 63-91 (126)
9 d1cc5a_ a.3.1.1 (A:) Cytochrom 8.1 1E+02 0.0075 18.7 2.3 14 12-25 67-80 (83)
10 d1kx7a_ a.3.1.1 (A:) Mono-heme 7.6 1.1E+02 0.0082 18.5 2.3 15 11-25 63-77 (81)
No 1
>d1wqji1 g.1.1.1 (I:2-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.96 E-value=5.2 Score=25.86 Aligned_cols=38 Identities=29% Similarity=0.586 Sum_probs=24.1
Q ss_pred HHHHHHHHHhcCC-CCCCcccCCCC------C--------ccCCCCcchhhhH
Q 029395 16 PVLQKALDYACGA-GADCNPIHSNG------P--------CYNPNTVKAHCSY 53 (194)
Q Consensus 16 ~~lq~~ldyACg~-gvDCs~I~~nG------~--------cyspct~~~~lSy 53 (194)
.+|-++|-++||. |..=++-..-+ . ||.+|++.+-.+|
T Consensus 7 s~LvdaL~~VCG~rGfy~~~~~~~~~~~~~r~krGIVeeCC~~~C~l~~Le~Y 59 (62)
T d1wqji1 7 AELVDALQFVCGDRGFYFNKPTGYGSSSRRAPQTGIVDECCFRSCDLRRLEMY 59 (62)
T ss_dssp HHHHHHHHHHHGGGCBCSEEECSSCCBTTBCSEEEHHHHHTTTCCCHHHHHTT
T ss_pred HHHHHHHHHHHccCCCCcCCCCCCCcccccCCCCChhhhccCCCCCHHHHHhh
Confidence 5789999999987 43322211111 0 8999988765554
No 2
>d2v5pc1 g.1.1.1 (C:6-63) Insulin-like growth factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.90 E-value=8.5 Score=24.52 Aligned_cols=38 Identities=24% Similarity=0.509 Sum_probs=22.8
Q ss_pred HHHHHHHHHhcCC-CCCCc-ccCCC-----CC----ccCCCCcchhhhH
Q 029395 16 PVLQKALDYACGA-GADCN-PIHSN-----GP----CYNPNTVKAHCSY 53 (194)
Q Consensus 16 ~~lq~~ldyACg~-gvDCs-~I~~n-----G~----cyspct~~~~lSy 53 (194)
.+|-++|-++||. |.-=. +.... |- |+++|++.+-.+|
T Consensus 6 s~LVdaL~~VCg~rGfy~~~~~~~~~r~~rGIVeeCC~~~C~l~~Le~Y 54 (58)
T d2v5pc1 6 GELVDTLQFVCGDRGFYFSRPASRVSRRSRGIVEECCFRSCDLALLETY 54 (58)
T ss_dssp HHHHHHHHHHSTTSCBCCCC----------CHHHHHTSSCCCSHHHHTT
T ss_pred HHHHHHHHHHHcCCCccccCCccccCCCCCCchhhcCCCCCCHHHHHHh
Confidence 5789999999997 32211 11111 11 8999988765544
No 3
>d2gsva1 a.23.7.1 (A:3-69) Hypothetical protein YvfG {Bacillus subtilis [TaxId: 1423]}
Probab=16.69 E-value=25 Score=22.55 Aligned_cols=9 Identities=44% Similarity=0.814 Sum_probs=7.7
Q ss_pred HHHHHHHHH
Q 029395 53 YAVNSYFQR 61 (194)
Q Consensus 53 yA~N~YYq~ 61 (194)
-|||+||+.
T Consensus 26 hAmNaYYrs 34 (67)
T d2gsva1 26 HAMNSYYRS 34 (67)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 589999985
No 4
>d2v33a1 b.1.18.4 (A:293-382) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=14.06 E-value=13 Score=25.56 Aligned_cols=23 Identities=30% Similarity=0.485 Sum_probs=18.3
Q ss_pred CCCCceEEEecCCCCCccccccc
Q 029395 70 DFSGSATVATTDPSTAGCSYPSS 92 (194)
Q Consensus 70 dF~G~Atv~t~dPS~~sC~f~~~ 92 (194)
||+|.|+|.......++|..++.
T Consensus 19 DfGGvatl~Y~a~k~GkCaVHs~ 41 (90)
T d2v33a1 19 DFGGVLTLTYKTNKNGDCSVHSH 41 (90)
T ss_dssp EEEEEEEEEEEESSCEEEEEECC
T ss_pred CcCCeEEEEEecCCCccceeEcC
Confidence 89999999976666799985543
No 5
>g1mso.1 g.1.1.1 (B:,A:) Insulin {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.03 E-value=37 Score=20.87 Aligned_cols=40 Identities=25% Similarity=0.379 Sum_probs=15.1
Q ss_pred CCChHHHHHHHHHhcCC-CCCCcccCCCCC----ccCCCCcchhhhH
Q 029395 12 GVGDPVLQKALDYACGA-GADCNPIHSNGP----CYNPNTVKAHCSY 53 (194)
Q Consensus 12 ~~~~~~lq~~ldyACg~-gvDCs~I~~nG~----cyspct~~~~lSy 53 (194)
..=-.+|-++|-++||. |.-=.+ +.|- |+.+|++.+--.|
T Consensus 5 hLCGs~LVdaL~~vCg~rGf~~~p--~~GIVeqCC~~~C~~~~Le~Y 49 (51)
T g1mso.1 5 HLCGSHLVEALYLVCGERGFFYTP--KTGIVEQCCTSICSLYQLENY 49 (51)
T ss_dssp CCCTHHHHHHHHHHHGGGCEEECC--CC-------------------
T ss_pred ccccHHHHHHHHHHHccCCcccCC--CCChHHHhcCCCCCHHHHHhh
Confidence 34457899999999986 321111 1121 8999988765444
No 6
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.82 E-value=42 Score=18.20 Aligned_cols=12 Identities=33% Similarity=0.924 Sum_probs=9.5
Q ss_pred CCCCCCceEEEe
Q 029395 68 SCDFSGSATVAT 79 (194)
Q Consensus 68 aCdF~G~Atv~t 79 (194)
.|||.|-+.|.+
T Consensus 2 ~cdf~gc~kifs 13 (30)
T d2dlka1 2 PCDFPGCGRIFS 13 (30)
T ss_dssp ECSSTTTCCEES
T ss_pred CCCCCCchhhhc
Confidence 499999888764
No 7
>d1nkla_ a.64.1.1 (A:) NK-lysin, NKL {Pig (Sus scrofa) [TaxId: 9823]}
Probab=8.97 E-value=1.5e+02 Score=17.76 Aligned_cols=37 Identities=14% Similarity=0.326 Sum_probs=26.4
Q ss_pred cCCCChHHHHHHHHHhcCCCCCCcccCCCCCccCCCCcchhhhHHHHHHHHH
Q 029395 10 KDGVGDPVLQKALDYACGAGADCNPIHSNGPCYNPNTVKAHCSYAVNSYFQR 61 (194)
Q Consensus 10 k~~~~~~~lq~~ldyACg~gvDCs~I~~nG~cyspct~~~~lSyA~N~YYq~ 61 (194)
+++..++++.++++.+|..- | ..++.+...+++|+..
T Consensus 19 ~~~~t~~~I~~~l~~~C~~l--------------p-~~~~~C~~~v~~y~~~ 55 (78)
T d1nkla_ 19 GPQPNEDTVTQAASQVCDKL--------------K-ILRGLCKKIMRSFLRR 55 (78)
T ss_dssp CSSCCHHHHHHHHHHHHHHS--------------C-STHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHhcC--------------C-cHHHHHHHHHHHHHHH
Confidence 34567789999999999641 2 3566777777777753
No 8
>d1iq0a1 a.27.1.1 (A:467-592) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=8.77 E-value=57 Score=22.22 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=19.3
Q ss_pred CCcchhhhHHHHHHHHHhCCCCCCCCCCC
Q 029395 45 NTVKAHCSYAVNSYFQRKGQAQGSCDFSG 73 (194)
Q Consensus 45 ct~~~~lSyA~N~YYq~~~~~~~aCdF~G 73 (194)
|.....++=+||+||+..+.....|.+..
T Consensus 63 ~~yl~~La~~F~~fY~~~~~~~~~~~i~~ 91 (126)
T d1iq0a1 63 AQYLLDLAASWNAYYNARENGQPATPVLT 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHCEETTEESSCSTT
T ss_pred HHHHHHHHHHHHHHHHhcccccccccccC
Confidence 33456678899999997665555555443
No 9
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=8.13 E-value=1e+02 Score=18.71 Aligned_cols=14 Identities=21% Similarity=0.245 Sum_probs=12.3
Q ss_pred CCChHHHHHHHHHh
Q 029395 12 GVGDPVLQKALDYA 25 (194)
Q Consensus 12 ~~~~~~lq~~ldyA 25 (194)
..+++++.++++|+
T Consensus 67 ~Lsd~ei~~vv~Yi 80 (83)
T d1cc5a_ 67 DCSDDELKAAIGKM 80 (83)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 47899999999997
No 10
>d1kx7a_ a.3.1.1 (A:) Mono-heme c-type cytochrome ScyA {Shewanella putrefaciens [TaxId: 24]}
Probab=7.62 E-value=1.1e+02 Score=18.47 Aligned_cols=15 Identities=13% Similarity=0.306 Sum_probs=12.8
Q ss_pred CCCChHHHHHHHHHh
Q 029395 11 DGVGDPVLQKALDYA 25 (194)
Q Consensus 11 ~~~~~~~lq~~ldyA 25 (194)
...+++++.++++|+
T Consensus 63 ~~Lsd~ei~~v~~Yi 77 (81)
T d1kx7a_ 63 TDCTDEDYKAAIEFM 77 (81)
T ss_dssp SSCCHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHH
Confidence 347899999999997
Done!