Query 029400
Match_columns 194
No_of_seqs 222 out of 1317
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 12:19:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029400.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/029400hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 1.4E-39 3.1E-44 292.7 12.6 143 1-143 142-288 (454)
2 PLN02213 sinapoylglucose-malat 100.0 2.4E-36 5.2E-41 262.5 13.3 141 2-142 26-166 (319)
3 PLN03016 sinapoylglucose-malat 100.0 2.8E-34 6E-39 258.7 13.8 141 2-142 140-280 (433)
4 PLN02209 serine carboxypeptida 100.0 9.6E-33 2.1E-37 248.9 14.4 142 2-143 142-283 (437)
5 PF00450 Peptidase_S10: Serine 100.0 2.8E-32 6E-37 241.2 11.4 139 1-141 110-254 (415)
6 PTZ00472 serine carboxypeptida 100.0 2.1E-29 4.5E-34 228.8 12.2 140 2-142 146-304 (462)
7 KOG1283 Serine carboxypeptidas 99.8 4.5E-21 9.7E-26 164.6 4.7 142 1-143 96-242 (414)
8 COG2939 Carboxypeptidase C (ca 99.8 5.5E-20 1.2E-24 165.8 10.1 138 4-143 173-333 (498)
9 KOG1515 Arylacetamide deacetyl 93.3 0.23 5E-06 43.9 6.2 58 12-75 152-210 (336)
10 PLN02454 triacylglycerol lipas 92.1 0.43 9.3E-06 43.4 6.4 68 4-74 206-273 (414)
11 PF01764 Lipase_3: Lipase (cla 91.2 0.57 1.2E-05 34.8 5.4 62 6-73 46-107 (140)
12 cd00741 Lipase Lipase. Lipase 90.8 0.46 1E-05 36.3 4.6 59 7-73 11-69 (153)
13 cd00519 Lipase_3 Lipase (class 90.3 0.76 1.7E-05 37.5 5.8 59 8-74 112-170 (229)
14 TIGR01607 PST-A Plasmodium sub 90.2 0.65 1.4E-05 40.4 5.6 67 4-72 102-185 (332)
15 PF00326 Peptidase_S9: Prolyl 90.2 0.71 1.5E-05 37.0 5.4 86 6-102 44-135 (213)
16 PF12697 Abhydrolase_6: Alpha/ 90.1 0.79 1.7E-05 35.1 5.5 54 9-75 51-104 (228)
17 TIGR03611 RutD pyrimidine util 89.4 0.46 1E-05 37.8 3.7 39 26-74 79-117 (257)
18 PF07859 Abhydrolase_3: alpha/ 89.2 0.72 1.6E-05 36.6 4.7 45 24-74 68-112 (211)
19 PLN02385 hydrolase; alpha/beta 87.9 0.93 2E-05 39.4 4.9 57 5-72 141-197 (349)
20 PHA02857 monoglyceride lipase; 87.9 1.2 2.5E-05 36.9 5.2 55 7-74 80-134 (276)
21 PLN02571 triacylglycerol lipas 87.2 2 4.3E-05 39.1 6.6 70 5-75 205-278 (413)
22 TIGR03695 menH_SHCHC 2-succiny 86.5 1.1 2.5E-05 34.8 4.2 38 25-72 68-105 (251)
23 TIGR03056 bchO_mg_che_rel puta 86.2 1.2 2.5E-05 36.3 4.3 39 26-74 94-132 (278)
24 PLN02753 triacylglycerol lipas 86.1 2.4 5.2E-05 39.8 6.7 72 4-75 287-362 (531)
25 PLN02719 triacylglycerol lipas 85.6 2.4 5.3E-05 39.6 6.4 72 4-75 273-348 (518)
26 PLN02298 hydrolase, alpha/beta 85.6 2 4.2E-05 36.8 5.6 58 5-73 113-170 (330)
27 PF00975 Thioesterase: Thioest 85.0 1.3 2.9E-05 35.4 4.1 38 28-72 67-104 (229)
28 TIGR01250 pro_imino_pep_2 prol 84.1 1.5 3.3E-05 35.3 4.0 39 25-73 94-132 (288)
29 PRK10749 lysophospholipase L2; 83.8 1.7 3.6E-05 37.6 4.4 56 5-73 112-167 (330)
30 PRK05077 frsA fermentation/res 83.2 2.2 4.8E-05 38.5 5.0 53 12-74 250-302 (414)
31 COG1506 DAP2 Dipeptidyl aminop 82.8 0.81 1.8E-05 43.5 2.2 60 6-77 453-512 (620)
32 PF05577 Peptidase_S28: Serine 82.2 1.9 4.1E-05 38.8 4.2 71 2-82 88-158 (434)
33 PRK10162 acetyl esterase; Prov 82.2 2.6 5.6E-05 36.5 4.9 45 26-74 153-197 (318)
34 PLN02652 hydrolase; alpha/beta 81.7 2.9 6.4E-05 37.5 5.2 59 5-74 189-247 (395)
35 PF05728 UPF0227: Uncharacteri 81.0 3.6 7.9E-05 33.2 5.1 43 26-81 58-100 (187)
36 cd00707 Pancreat_lipase_like P 80.9 2.7 5.8E-05 35.7 4.5 55 6-71 92-146 (275)
37 PF11144 DUF2920: Protein of u 80.7 3.5 7.6E-05 37.4 5.3 60 5-74 161-221 (403)
38 PF11288 DUF3089: Protein of u 80.5 3.1 6.6E-05 34.4 4.5 62 6-73 76-138 (207)
39 PRK14566 triosephosphate isome 79.5 5.2 0.00011 34.2 5.7 61 4-75 188-248 (260)
40 PRK14567 triosephosphate isome 79.1 6.1 0.00013 33.7 6.0 61 4-75 178-238 (253)
41 PLN02324 triacylglycerol lipas 78.7 6.7 0.00014 35.8 6.5 71 4-75 193-268 (415)
42 TIGR02427 protocat_pcaD 3-oxoa 78.4 3.4 7.3E-05 32.3 4.1 36 5-47 64-99 (251)
43 PLN02761 lipase class 3 family 78.0 6.5 0.00014 36.9 6.3 71 5-75 269-345 (527)
44 PLN02578 hydrolase 77.8 2.7 5.9E-05 36.7 3.7 50 5-71 137-186 (354)
45 PLN00021 chlorophyllase 76.9 4.8 0.0001 35.1 4.9 63 6-73 101-167 (313)
46 PF10340 DUF2424: Protein of u 76.9 5.8 0.00012 35.7 5.5 46 26-76 194-239 (374)
47 PRK10566 esterase; Provisional 76.4 4.2 9.2E-05 32.9 4.3 33 14-46 94-126 (249)
48 TIGR00976 /NonD putative hydro 76.4 3.4 7.4E-05 38.5 4.1 59 5-75 77-135 (550)
49 PRK11126 2-succinyl-6-hydroxy- 74.3 5.1 0.00011 32.0 4.2 38 25-71 64-101 (242)
50 PLN02211 methyl indole-3-aceta 74.2 4.4 9.5E-05 34.1 3.9 36 9-46 71-106 (273)
51 PF00561 Abhydrolase_1: alpha/ 72.5 4.3 9.4E-05 31.6 3.3 54 5-71 25-78 (230)
52 PRK03204 haloalkane dehalogena 72.1 6.4 0.00014 33.1 4.4 52 8-72 85-136 (286)
53 PLN02894 hydrolase, alpha/beta 71.9 6.7 0.00014 35.2 4.7 53 7-72 159-211 (402)
54 PLN00413 triacylglycerol lipas 71.0 9.9 0.00022 35.3 5.6 61 9-74 269-330 (479)
55 PLN02408 phospholipase A1 70.1 13 0.00028 33.4 6.0 65 5-74 179-243 (365)
56 PLN02429 triosephosphate isome 69.6 12 0.00027 32.8 5.7 61 4-75 238-299 (315)
57 PLN02310 triacylglycerol lipas 69.3 12 0.00026 34.1 5.7 65 5-74 186-251 (405)
58 TIGR03100 hydr1_PEP hydrolase, 69.0 10 0.00022 31.9 4.9 56 6-74 81-136 (274)
59 KOG1455 Lysophospholipase [Lip 68.5 8.4 0.00018 33.8 4.3 42 4-46 107-148 (313)
60 PLN02934 triacylglycerol lipas 68.3 15 0.00033 34.4 6.2 62 9-74 306-367 (515)
61 PRK03592 haloalkane dehalogena 68.1 8 0.00017 32.3 4.2 39 26-74 92-130 (295)
62 PF05990 DUF900: Alpha/beta hy 68.0 12 0.00026 31.1 5.1 73 3-76 68-141 (233)
63 PLN02802 triacylglycerol lipas 67.9 13 0.00029 34.7 5.8 66 5-75 309-374 (509)
64 TIGR02240 PHA_depoly_arom poly 67.8 6.5 0.00014 32.5 3.5 52 9-73 76-127 (276)
65 PLN02965 Probable pheophorbida 67.6 8.7 0.00019 31.4 4.2 35 27-71 72-106 (255)
66 PLN02561 triosephosphate isome 67.6 21 0.00045 30.4 6.5 60 4-74 179-239 (253)
67 PLN02442 S-formylglutathione h 67.0 10 0.00022 32.1 4.6 54 12-75 127-181 (283)
68 TIGR02821 fghA_ester_D S-formy 66.9 15 0.00032 30.8 5.6 52 13-75 124-176 (275)
69 PRK00870 haloalkane dehalogena 66.8 6.7 0.00015 32.9 3.5 50 9-71 100-149 (302)
70 PLN02824 hydrolase, alpha/beta 66.7 9.3 0.0002 31.8 4.3 51 9-72 87-137 (294)
71 KOG1838 Alpha/beta hydrolase [ 65.8 15 0.00032 33.6 5.5 54 9-72 183-236 (409)
72 PRK10673 acyl-CoA esterase; Pr 65.7 7.8 0.00017 31.2 3.5 49 4-69 65-113 (255)
73 TIGR03101 hydr2_PEP hydrolase, 64.8 21 0.00046 30.4 6.1 60 7-80 83-142 (266)
74 COG0657 Aes Esterase/lipase [L 64.2 15 0.00033 31.2 5.2 46 25-76 150-195 (312)
75 PLN02847 triacylglycerol lipas 63.6 15 0.00033 35.1 5.4 51 11-69 238-288 (633)
76 PLN02733 phosphatidylcholine-s 63.4 13 0.00028 34.1 4.8 93 5-105 143-242 (440)
77 PF11187 DUF2974: Protein of u 63.2 7.1 0.00015 32.4 2.9 42 5-50 66-107 (224)
78 PLN03037 lipase class 3 family 62.2 19 0.00042 33.8 5.7 67 5-75 295-362 (525)
79 PF10230 DUF2305: Uncharacteri 61.7 28 0.0006 29.4 6.3 61 3-71 61-121 (266)
80 PF06057 VirJ: Bacterial virul 61.5 13 0.00028 30.4 4.0 62 4-74 48-109 (192)
81 KOG2564 Predicted acetyltransf 61.4 22 0.00047 31.3 5.5 73 3-88 126-199 (343)
82 TIGR03230 lipo_lipase lipoprot 61.4 14 0.00031 33.9 4.7 42 5-47 98-139 (442)
83 PTZ00333 triosephosphate isome 61.2 31 0.00066 29.4 6.4 60 4-74 182-242 (255)
84 TIGR03343 biphenyl_bphD 2-hydr 61.2 8.6 0.00019 31.5 3.0 23 25-47 99-121 (282)
85 PF06500 DUF1100: Alpha/beta h 60.8 7.7 0.00017 35.4 2.8 57 8-74 242-298 (411)
86 PRK04940 hypothetical protein; 59.9 26 0.00057 28.3 5.5 42 27-81 60-101 (180)
87 PRK14875 acetoin dehydrogenase 59.3 12 0.00025 32.2 3.6 24 24-47 194-217 (371)
88 PF08840 BAAT_C: BAAT / Acyl-C 58.8 6.7 0.00014 32.0 1.9 35 15-49 10-44 (213)
89 PLN02162 triacylglycerol lipas 57.4 28 0.00061 32.4 5.8 63 9-75 263-325 (475)
90 KOG4569 Predicted lipase [Lipi 56.7 26 0.00056 30.8 5.4 61 9-75 156-216 (336)
91 PF08237 PE-PPE: PE-PPE domain 56.1 27 0.00058 29.0 5.1 60 5-72 31-90 (225)
92 TIGR01249 pro_imino_pep_1 prol 55.9 13 0.00028 31.5 3.3 38 26-73 94-131 (306)
93 TIGR01738 bioH putative pimelo 55.2 7.9 0.00017 30.0 1.8 35 27-71 65-99 (245)
94 PF03583 LIP: Secretory lipase 55.1 42 0.00091 28.8 6.3 66 5-75 46-116 (290)
95 PF12740 Chlorophyllase2: Chlo 54.8 23 0.00049 30.3 4.5 63 3-72 63-131 (259)
96 COG2267 PldB Lysophospholipase 54.3 22 0.00049 30.5 4.5 41 25-75 105-145 (298)
97 PRK14565 triosephosphate isome 54.0 35 0.00077 28.7 5.5 54 3-75 172-225 (237)
98 PRK11071 esterase YqiA; Provis 53.8 15 0.00033 29.2 3.2 51 9-75 46-96 (190)
99 PLN02511 hydrolase 53.8 40 0.00087 29.9 6.2 35 7-44 156-190 (388)
100 cd00311 TIM Triosephosphate is 53.5 43 0.00093 28.2 6.0 60 4-75 175-235 (242)
101 PRK00042 tpiA triosephosphate 52.9 45 0.00097 28.3 6.0 60 4-75 179-239 (250)
102 TIGR01840 esterase_phb esteras 51.0 18 0.00038 29.0 3.2 36 9-45 78-113 (212)
103 COG0429 Predicted hydrolase of 50.2 35 0.00075 30.4 5.0 54 8-71 132-185 (345)
104 PF05057 DUF676: Putative seri 49.4 48 0.0011 26.9 5.6 70 5-75 57-129 (217)
105 PRK15492 triosephosphate isome 49.0 53 0.0012 28.0 5.9 60 4-75 188-248 (260)
106 PF00681 Plectin: Plectin repe 48.4 8.9 0.00019 23.5 0.8 32 70-101 12-43 (45)
107 PF14542 Acetyltransf_CG: GCN5 48.3 13 0.00027 25.6 1.7 15 12-26 63-77 (78)
108 PF10081 Abhydrolase_9: Alpha/ 48.2 31 0.00067 30.0 4.3 36 4-39 86-121 (289)
109 PRK10349 carboxylesterase BioH 47.5 18 0.00039 29.3 2.8 35 26-70 73-107 (256)
110 PF12695 Abhydrolase_5: Alpha/ 46.6 20 0.00044 25.9 2.7 37 25-72 59-95 (145)
111 PLN02679 hydrolase, alpha/beta 46.0 26 0.00056 30.6 3.7 51 5-71 140-190 (360)
112 KOG1454 Predicted hydrolase/ac 45.1 22 0.00048 31.1 3.1 40 8-50 112-151 (326)
113 PF00151 Lipase: Lipase; Inte 44.2 22 0.00047 31.3 2.9 45 5-50 129-173 (331)
114 COG3571 Predicted hydrolase of 44.0 15 0.00032 29.8 1.6 27 24-50 86-112 (213)
115 PRK10985 putative hydrolase; P 41.9 60 0.0013 27.8 5.3 18 26-43 130-147 (324)
116 PF06259 Abhydrolase_8: Alpha/ 41.9 45 0.00098 26.7 4.2 40 5-47 89-129 (177)
117 KOG0256 1-aminocyclopropane-1- 41.8 30 0.00065 31.8 3.4 53 41-97 210-269 (471)
118 PF00121 TIM: Triosephosphate 41.2 15 0.00033 30.9 1.4 62 3-75 176-238 (244)
119 PRK13962 bifunctional phosphog 40.8 56 0.0012 31.6 5.3 61 4-75 574-635 (645)
120 PF05068 MtlR: Mannitol repres 40.7 29 0.00063 27.8 2.9 27 74-100 62-88 (170)
121 KOG2100 Dipeptidyl aminopeptid 40.3 34 0.00074 33.6 3.8 82 7-100 589-672 (755)
122 PRK08775 homoserine O-acetyltr 40.2 35 0.00075 29.4 3.6 52 5-72 122-173 (343)
123 cd03871 M14_CPB Peptidase M14 39.7 19 0.00041 31.3 1.8 36 7-44 9-44 (300)
124 PF07533 BRK: BRK domain; Int 39.5 18 0.00038 22.6 1.2 12 14-25 30-41 (46)
125 PF08060 NOSIC: NOSIC (NUC001) 39.0 29 0.00063 22.1 2.2 21 5-25 14-35 (53)
126 PF09851 SHOCT: Short C-termin 38.0 34 0.00073 19.3 2.1 20 82-101 8-27 (31)
127 KOG1643 Triosephosphate isomer 37.6 70 0.0015 26.8 4.7 61 4-76 177-239 (247)
128 KOG2183 Prolylcarboxypeptidase 36.8 48 0.001 30.6 3.9 61 4-65 145-208 (492)
129 PRK14905 triosephosphate isome 36.6 1.1E+02 0.0023 27.4 6.1 60 4-75 189-249 (355)
130 PF02230 Abhydrolase_2: Phosph 36.6 33 0.00071 27.5 2.7 58 6-75 86-143 (216)
131 PLN03084 alpha/beta hydrolase 34.7 41 0.00089 30.1 3.2 51 9-72 182-232 (383)
132 PF10503 Esterase_phd: Esteras 33.4 35 0.00077 28.3 2.4 53 10-72 80-132 (220)
133 PF07389 DUF1500: Protein of u 33.3 38 0.00083 24.3 2.2 28 8-37 7-34 (100)
134 PF07519 Tannase: Tannase and 33.3 2E+02 0.0043 26.6 7.5 80 11-104 103-191 (474)
135 TIGR01836 PHA_synth_III_C poly 32.7 70 0.0015 27.6 4.3 39 26-74 135-173 (350)
136 KOG2182 Hydrolytic enzymes of 32.2 77 0.0017 29.8 4.5 40 3-42 148-187 (514)
137 smart00824 PKS_TE Thioesterase 31.5 1.4E+02 0.003 22.5 5.4 26 26-51 63-88 (212)
138 PRK10115 protease 2; Provision 31.4 54 0.0012 31.7 3.6 60 7-77 505-564 (686)
139 PRK11460 putative hydrolase; P 31.3 69 0.0015 26.2 3.8 23 24-46 100-122 (232)
140 PRK01917 cation-binding hemery 31.1 49 0.0011 25.1 2.7 19 3-21 95-113 (139)
141 smart00592 BRK domain in trans 30.5 36 0.00078 21.1 1.5 14 13-26 27-40 (45)
142 KOG4409 Predicted hydrolase/ac 30.2 60 0.0013 29.2 3.4 57 5-74 141-197 (365)
143 PF04414 tRNA_deacylase: D-ami 30.1 1.3E+02 0.0029 24.9 5.2 47 2-51 105-152 (213)
144 cd00312 Esterase_lipase Estera 29.8 55 0.0012 29.7 3.3 33 11-44 161-193 (493)
145 COG3208 GrsT Predicted thioest 28.8 72 0.0016 27.1 3.5 29 23-51 70-98 (244)
146 PRK11001 mtlR mannitol repress 28.8 63 0.0014 26.0 3.0 34 64-100 53-86 (171)
147 PRK05855 short chain dehydroge 28.1 66 0.0014 29.3 3.5 31 4-40 77-107 (582)
148 PF11943 DUF3460: Protein of u 28.0 55 0.0012 21.8 2.1 18 8-25 5-22 (60)
149 PRK05371 x-prolyl-dipeptidyl a 27.6 1.5E+02 0.0033 29.2 6.0 40 26-75 337-376 (767)
150 smart00631 Zn_pept Zn_pept. 27.3 36 0.00077 28.9 1.5 36 7-44 4-39 (277)
151 COG4425 Predicted membrane pro 27.2 94 0.002 29.1 4.1 36 4-39 374-409 (588)
152 PF10929 DUF2811: Protein of u 27.0 47 0.001 21.8 1.7 23 4-26 4-26 (57)
153 PF07819 PGAP1: PGAP1-like pro 26.9 95 0.0021 25.5 3.9 63 7-76 63-128 (225)
154 PRK00175 metX homoserine O-ace 26.8 81 0.0017 27.8 3.7 53 7-72 129-182 (379)
155 PF01738 DLH: Dienelactone hyd 26.7 43 0.00093 26.7 1.8 34 12-45 83-116 (218)
156 cd03863 M14_CPD_II The second 26.5 53 0.0011 29.5 2.5 65 8-76 10-76 (375)
157 COG3319 Thioesterase domains o 26.3 49 0.0011 28.2 2.1 31 19-52 60-90 (257)
158 PF02129 Peptidase_S15: X-Pro 25.7 44 0.00095 27.8 1.7 59 6-76 82-140 (272)
159 COG4757 Predicted alpha/beta h 25.7 40 0.00088 28.8 1.5 79 26-105 104-195 (281)
160 TIGR01392 homoserO_Ac_trn homo 25.7 69 0.0015 27.7 3.0 53 7-72 109-162 (351)
161 cd03859 M14_CPT Peptidase M14- 24.7 46 0.001 28.6 1.7 36 7-44 7-42 (295)
162 KOG4627 Kynurenine formamidase 24.4 1.1E+02 0.0023 25.9 3.7 78 4-94 115-192 (270)
163 KOG2382 Predicted alpha/beta h 24.2 93 0.002 27.4 3.5 32 4-38 103-134 (315)
164 PRK13604 luxD acyl transferase 24.2 1E+02 0.0022 27.0 3.7 37 27-75 108-144 (307)
165 cd06905 Peptidase_M14-like_8 A 24.1 47 0.001 29.7 1.7 36 7-44 7-42 (360)
166 cd03858 M14_CP_N-E_like Carbox 24.0 48 0.0011 29.4 1.8 35 8-44 5-39 (374)
167 KOG3724 Negative regulator of 24.0 91 0.002 31.2 3.6 36 5-40 154-195 (973)
168 COG0412 Dienelactone hydrolase 23.8 1.4E+02 0.003 24.7 4.3 42 5-47 91-132 (236)
169 cd03860 M14_CP_A-B_like The Pe 23.4 52 0.0011 28.2 1.8 35 8-44 5-39 (294)
170 TIGR01175 pilM type IV pilus a 23.4 1.7E+02 0.0037 25.2 5.0 43 7-52 264-306 (348)
171 cd06248 M14_CPA_CPB_like Pepti 22.8 49 0.0011 28.7 1.5 65 7-75 7-72 (304)
172 PRK03995 hypothetical protein; 22.0 1.8E+02 0.0039 25.0 4.8 46 3-51 158-203 (267)
173 PF03403 PAF-AH_p_II: Platelet 21.6 56 0.0012 29.3 1.7 37 28-75 229-265 (379)
174 COG0596 MhpC Predicted hydrola 21.4 1.5E+02 0.0032 22.2 3.9 50 11-73 75-124 (282)
175 PF06028 DUF915: Alpha/beta hy 21.1 2.2E+02 0.0048 24.1 5.1 49 21-73 97-145 (255)
176 PF02450 LCAT: Lecithin:choles 20.3 89 0.0019 27.9 2.7 62 10-74 102-163 (389)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=292.69 Aligned_cols=143 Identities=40% Similarity=0.727 Sum_probs=134.0
Q ss_pred CChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhH
Q 029400 1 MNDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (194)
Q Consensus 1 ~~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s 80 (194)
++|+.+|+|++.||++||++||||++|||||+||||||||||+||++|+++|+....+.|||||++||||+||+..|.++
T Consensus 142 ~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~ 221 (454)
T KOG1282|consen 142 TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNG 221 (454)
T ss_pred CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccccc
Confidence 58999999999999999999999999999999999999999999999999998766789999999999999999999999
Q ss_pred HHHHhhhccccCHHHHHHHHhhchh---ccccCCCCchhHHHHHHHHH-HhcCCCCcccCCCCCCCC
Q 029400 81 KIQFAYLNALITYEIYKSAKKNCKG---DYVNVDPGNYLCKADLQNIS-ACTGNVNGGNIYEPKCSF 143 (194)
Q Consensus 81 ~~~fa~~~glIsd~~y~~~~~~C~~---~~~~~~~~~~~C~~a~~~~~-~~~~~in~YdI~~~~C~~ 143 (194)
+++|+|+||||||++|+.+++.|.. ++.+..+.+..|..+++.+. +...+++.|+|+.+.|..
T Consensus 222 ~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~ 288 (454)
T KOG1282|consen 222 RIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTKCNKAVEEFDSKTTGDIDNYYILTPDCYP 288 (454)
T ss_pred hhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhHHHHHHHHHHHHHhccCchhhhcchhhcc
Confidence 9999999999999999999999987 45555666789999999998 777899999999999986
No 2
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=2.4e-36 Score=262.49 Aligned_cols=141 Identities=45% Similarity=0.797 Sum_probs=127.9
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHH
Q 029400 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (194)
Q Consensus 2 ~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~ 81 (194)
+|+++|.|++.||+.||++||+|+++||||+||||||||||+||++|+++|+.+..+.|||||++||||||+|..|..++
T Consensus 26 ~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~~~~~~ 105 (319)
T PLN02213 26 GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFR 105 (319)
T ss_pred ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccccchhH
Confidence 56778899999999999999999999999999999999999999999999977666789999999999999999999999
Q ss_pred HHHhhhccccCHHHHHHHHhhchhccccCCCCchhHHHHHHHHHHhcCCCCcccCCCCCCC
Q 029400 82 IQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISACTGNVNGGNIYEPKCS 142 (194)
Q Consensus 82 ~~fa~~~glIsd~~y~~~~~~C~~~~~~~~~~~~~C~~a~~~~~~~~~~in~YdI~~~~C~ 142 (194)
++|++.+||||+++++.+++.|........+++..|..+++.+..+.+++|+|||+.+.|.
T Consensus 106 ~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (319)
T PLN02213 106 IPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCD 166 (319)
T ss_pred hhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHhhcccCccc
Confidence 9999999999999999999999865433345567899999988888899999999977674
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2.8e-34 Score=258.67 Aligned_cols=141 Identities=45% Similarity=0.797 Sum_probs=128.8
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHH
Q 029400 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (194)
Q Consensus 2 ~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~ 81 (194)
+|.++|+++++||++||++||+|+++||||+||||||||||.+|++|.++|+.+..+.|||||++||||+|||..|..++
T Consensus 140 ~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~ 219 (433)
T PLN03016 140 GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFR 219 (433)
T ss_pred CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhH
Confidence 46677899999999999999999999999999999999999999999999987666789999999999999999999999
Q ss_pred HHHhhhccccCHHHHHHHHhhchhccccCCCCchhHHHHHHHHHHhcCCCCcccCCCCCCC
Q 029400 82 IQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISACTGNVNGGNIYEPKCS 142 (194)
Q Consensus 82 ~~fa~~~glIsd~~y~~~~~~C~~~~~~~~~~~~~C~~a~~~~~~~~~~in~YdI~~~~C~ 142 (194)
++|++.+||||+++++.+++.|...+...++++..|..+++.+..+.+++|+|||+.+.|.
T Consensus 220 ~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~C~~~~~~~~~~~~~~n~yni~~~~~~ 280 (433)
T PLN03016 220 IPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIHHILTPDCD 280 (433)
T ss_pred HHHHHhcCCCCHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHhcCCChhhccCCccc
Confidence 9999999999999999999999875543345678899999988888999999999987674
No 4
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=9.6e-33 Score=248.88 Aligned_cols=142 Identities=44% Similarity=0.783 Sum_probs=126.8
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHH
Q 029400 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (194)
Q Consensus 2 ~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~ 81 (194)
+|+++|+++++||+.||++||+|+++||||+||||||||||.+|++|.++|+.+..+.|||||++||||+|||..|..++
T Consensus 142 ~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~ 221 (437)
T PLN02209 142 SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFR 221 (437)
T ss_pred CCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhH
Confidence 46778899999999999999999999999999999999999999999999876666789999999999999999999999
Q ss_pred HHHhhhccccCHHHHHHHHhhchhccccCCCCchhHHHHHHHHHHhcCCCCcccCCCCCCCC
Q 029400 82 IQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISACTGNVNGGNIYEPKCSF 143 (194)
Q Consensus 82 ~~fa~~~glIsd~~y~~~~~~C~~~~~~~~~~~~~C~~a~~~~~~~~~~in~YdI~~~~C~~ 143 (194)
++|++++||||+++|+.+++.|...+...++.+..|..++..+..+...+|.|++..+.|..
T Consensus 222 ~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~~~~~~~c~~ 283 (437)
T PLN02209 222 IPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVEEYHKCTDNINSHHTLIANCDD 283 (437)
T ss_pred HHHHhccCCCCHHHHHHHHHhcccccccCCCChHHHHHHHHHHHHHhhcCCccccccccccc
Confidence 99999999999999999999998644333456778999998888888889999877666853
No 5
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=99.97 E-value=2.8e-32 Score=241.16 Aligned_cols=139 Identities=34% Similarity=0.621 Sum_probs=122.2
Q ss_pred CChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhH
Q 029400 1 MNDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (194)
Q Consensus 1 ~~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s 80 (194)
++++++|+++++||+.||.+||+|+++||||+||||||||||.+|.+|+++|+.+..+.|||||++||||++||..|..+
T Consensus 110 ~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~~~~~s 189 (415)
T PF00450_consen 110 WNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPRIQYNS 189 (415)
T ss_dssp -SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccccccee
Confidence 37899999999999999999999999999999999999999999999999998876689999999999999999999999
Q ss_pred HHHHhhhccccCHHHHHHHHhhchhccccCCCCchhHHHHHHHHHHh------cCCCCcccCCCCCC
Q 029400 81 KIQFAYLNALITYEIYKSAKKNCKGDYVNVDPGNYLCKADLQNISAC------TGNVNGGNIYEPKC 141 (194)
Q Consensus 81 ~~~fa~~~glIsd~~y~~~~~~C~~~~~~~~~~~~~C~~a~~~~~~~------~~~in~YdI~~~~C 141 (194)
+.+|++.+|+|+++.++.+.+.|.... .+......|..+++.+... ..++|+|||+.+ |
T Consensus 190 ~~~~~~~~gli~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~~~~n~Ydi~~~-~ 254 (415)
T PF00450_consen 190 YADYAYYHGLIDDQQYDDLNKACEACP-QCQKAITECAAALDELSCQYAISQCNGGINPYDIRQP-C 254 (415)
T ss_dssp HHHHHHHTTSS-HHHHHHHHHHHTTSH-SSSCCHHHHHHHHHHHHHHCHHHHHHTTSETTSTTSE-E
T ss_pred ecccccccCcccHHHHHHHHHHhhccc-cccchhhHHHHHHHhhhhhcccccccCCcceeeeecc-c
Confidence 999999999999999999999997531 1234567899999888753 489999999999 5
No 6
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.96 E-value=2.1e-29 Score=228.82 Aligned_cols=140 Identities=25% Similarity=0.446 Sum_probs=117.2
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHH
Q 029400 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (194)
Q Consensus 2 ~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~ 81 (194)
+++++|+|+++||+.||++||+|..+||||+||||||+|||.+|.+|.++|+.+..++|||||++|||||+||.+|..++
T Consensus 146 ~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~ 225 (462)
T PTZ00472 146 NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYTQYASY 225 (462)
T ss_pred ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhhhcccH
Confidence 57899999999999999999999999999999999999999999999999987777889999999999999999999999
Q ss_pred HHHhhh-------ccccCHHHHHHHHh---hchhccccC----CCCchhHHHHHHHHHHh-----cCCCCcccCCCCCCC
Q 029400 82 IQFAYL-------NALITYEIYKSAKK---NCKGDYVNV----DPGNYLCKADLQNISAC-----TGNVNGGNIYEPKCS 142 (194)
Q Consensus 82 ~~fa~~-------~glIsd~~y~~~~~---~C~~~~~~~----~~~~~~C~~a~~~~~~~-----~~~in~YdI~~~~C~ 142 (194)
.+|+|. +|+|++++++.+++ .|......+ ...+..|..+...|.+. .+++|+|||+.+ |.
T Consensus 226 ~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~~~~~~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~ 304 (462)
T PTZ00472 226 PRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNPDDADSSCSVARALCNEYIAVYSATGLNNYDIRKP-CI 304 (462)
T ss_pred HHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccCCCcchHHHHHHHHHHHHHHHHHhcCCChhheecc-CC
Confidence 999985 58999999998875 465322111 12334576665554432 378999999998 84
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=4.5e-21 Score=164.55 Aligned_cols=142 Identities=21% Similarity=0.196 Sum_probs=118.9
Q ss_pred CChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhH
Q 029400 1 MNDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (194)
Q Consensus 1 ~~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s 80 (194)
++++++|.|+.+.|++||..||||+..||||+.|||||++.|.+|..+...+++|. .+.|+.|++||++||+|.....+
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~-i~~nf~~VaLGDSWISP~D~V~S 174 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGE-IKLNFIGVALGDSWISPEDFVFS 174 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCc-eeecceeEEccCcccChhHhhhc
Confidence 47899999999999999999999999999999999999999999999999999875 68999999999999999999999
Q ss_pred HHHHhhhccccCHHHHHHHH---hhchhcccc--CCCCchhHHHHHHHHHHhcCCCCcccCCCCCCCC
Q 029400 81 KIQFAYLNALITYEIYKSAK---KNCKGDYVN--VDPGNYLCKADLQNISACTGNVNGGNIYEPKCSF 143 (194)
Q Consensus 81 ~~~fa~~~glIsd~~y~~~~---~~C~~~~~~--~~~~~~~C~~a~~~~~~~~~~in~YdI~~~~C~~ 143 (194)
+.||++.+++++|...++.. +.|++...+ ...+...+......+...+.++|+|||+.+.-.+
T Consensus 175 WGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYNil~~t~~d 242 (414)
T KOG1283|consen 175 WGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYNILTKTLGD 242 (414)
T ss_pred chHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceeeeeccCCCc
Confidence 99999999999999887665 456542111 0122233455556677788999999999984443
No 8
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=99.81 E-value=5.5e-20 Score=165.83 Aligned_cols=138 Identities=23% Similarity=0.363 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCC--CeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCC-CCChhhhhhH
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLAN--PLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP-VTDDKIDQNS 80 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~--~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg-~td~~~q~~s 80 (194)
..+.+|++.|++.||+.||++.+. |+||+||||||+|+|.||.+|.++|... +-.+||++++|||| +|||..|...
T Consensus 173 ~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~-~~~~nlssvligng~~t~Pl~~~~~ 251 (498)
T COG2939 173 EGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIAL-NGNVNLSSVLIGNGLWTDPLTQYLT 251 (498)
T ss_pred hccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhcccc-CCceEeeeeeecCCcccChhHHHHH
Confidence 467899999999999999999888 9999999999999999999999987433 24799999999999 9999999999
Q ss_pred HHHHhhhc----cccCHHHHHHHHhhchhcccc-----C--CCCchhHHHHHHHHHHhc------CC---CCcccCCCCC
Q 029400 81 KIQFAYLN----ALITYEIYKSAKKNCKGDYVN-----V--DPGNYLCKADLQNISACT------GN---VNGGNIYEPK 140 (194)
Q Consensus 81 ~~~fa~~~----glIsd~~y~~~~~~C~~~~~~-----~--~~~~~~C~~a~~~~~~~~------~~---in~YdI~~~~ 140 (194)
+.++|... +..+.+.++.+.+.|+++++- + ...-..|..+...+.... .+ .|+|||++.
T Consensus 252 y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~- 330 (498)
T COG2939 252 YEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGGRLLNVYDIREE- 330 (498)
T ss_pred hhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhccccccccccccchhh-
Confidence 99999865 456778888999999875531 1 223356888877776543 44 999999988
Q ss_pred CCC
Q 029400 141 CSF 143 (194)
Q Consensus 141 C~~ 143 (194)
|.+
T Consensus 331 ~~d 333 (498)
T COG2939 331 CRD 333 (498)
T ss_pred cCC
Confidence 865
No 9
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=93.31 E-value=0.23 Score=43.92 Aligned_cols=58 Identities=29% Similarity=0.496 Sum_probs=46.0
Q ss_pred HHHHH-HHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 12 HFLRK-WLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 12 ~FL~~-f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.|+.. |++.+=.+.. ++|+|+|-||-.+-.+|+++.+.- ...+.|+|.++--|++...
T Consensus 152 w~~~~~~~~~~~D~~r--v~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 152 WVLKNSWLKLGADPSR--VFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred HHHHhHHHHhCCCccc--EEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEEEecccCCC
Confidence 44444 8888777754 999999999999999999998753 1357899999988887654
No 10
>PLN02454 triacylglycerol lipase
Probab=92.13 E-value=0.43 Score=43.38 Aligned_cols=68 Identities=12% Similarity=0.218 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..+..++...++...+++|.+.. .++|+|+|-||-.+-..|..|.+.... .+.++++.|..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 36778899999999999987743 699999999999888888888764321 134567789999998865
No 11
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=91.23 E-value=0.57 Score=34.82 Aligned_cols=62 Identities=19% Similarity=0.317 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
....+.+-|+++.+++| ...+.|+|+|-||-.+-.++..+.+.... ...+++-+..|.|-+.
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCcccc
Confidence 44567777888888888 35799999999999999999999876542 2577888999988874
No 12
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.82 E-value=0.46 Score=36.34 Aligned_cols=59 Identities=17% Similarity=0.242 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
..++...+++...++|. .+++|+|+|-||..+-.++..+.+... .-..+-+..|-|-+.
T Consensus 11 ~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~~ 69 (153)
T cd00741 11 ANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCccc
Confidence 34444445555555564 479999999999999999988876531 223455666655553
No 13
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=90.32 E-value=0.76 Score=37.54 Aligned_cols=59 Identities=19% Similarity=0.377 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.++...+++..+++|.+ +++++|+|-||-.+-.+|..+.+.. +..+++.+..|.|-+..
T Consensus 112 ~~~~~~~~~~~~~~p~~---~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 112 NQVLPELKSALKQYPDY---KIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHHhhCCCc---eEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCCC
Confidence 34455666666666644 6999999999999988888887653 24567899999887743
No 14
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=90.23 E-value=0.65 Score=40.44 Aligned_cols=67 Identities=15% Similarity=0.221 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHc----------------cCCC-CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeE
Q 029400 4 TLSATQIYHFLRKWLIVH----------------SDFL-ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYM 66 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~f----------------Pe~~-~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~ 66 (194)
+..++|+..+++..-+.. .++. ..|++|.|+|.||..+-.+++...+..+. .-...++|++
T Consensus 102 ~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~--~~~~~i~g~i 179 (332)
T TIGR01607 102 DDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNEN--NDKLNIKGCI 179 (332)
T ss_pred HHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccc--ccccccceEE
Confidence 345667777776553310 0232 57999999999998777666654322110 0124688888
Q ss_pred ecCCCC
Q 029400 67 LGNPVT 72 (194)
Q Consensus 67 IGNg~t 72 (194)
+-.|.+
T Consensus 180 ~~s~~~ 185 (332)
T TIGR01607 180 SLSGMI 185 (332)
T ss_pred Eeccce
Confidence 666664
No 15
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=90.22 E-value=0.71 Score=36.96 Aligned_cols=86 Identities=15% Similarity=0.116 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhH---HH
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS---KI 82 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s---~~ 82 (194)
...|+...++ |+.+.+..-...+.|.|.||||+.+-.++.. . .-.++.++.++|++|....... +.
T Consensus 44 ~~~D~~~~i~-~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~---~-------~~~f~a~v~~~g~~d~~~~~~~~~~~~ 112 (213)
T PF00326_consen 44 DVDDVVAAIE-YLIKQYYIDPDRIGIMGHSYGGYLALLAATQ---H-------PDRFKAAVAGAGVSDLFSYYGTTDIYT 112 (213)
T ss_dssp HHHHHHHHHH-HHHHTTSEEEEEEEEEEETHHHHHHHHHHHH---T-------CCGSSEEEEESE-SSTTCSBHHTCCHH
T ss_pred chhhHHHHHH-HHhccccccceeEEEEcccccccccchhhcc---c-------ceeeeeeeccceecchhcccccccccc
Confidence 4555555554 4445555556789999999999977766552 1 1236899999999998765433 22
Q ss_pred H-Hhhhccc--cCHHHHHHHHhh
Q 029400 83 Q-FAYLNAL--ITYEIYKSAKKN 102 (194)
Q Consensus 83 ~-fa~~~gl--Isd~~y~~~~~~ 102 (194)
. -....|. -+.+.|+.+...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~s~~ 135 (213)
T PF00326_consen 113 KAEYLEYGDPWDNPEFYRELSPI 135 (213)
T ss_dssp HGHHHHHSSTTTSHHHHHHHHHG
T ss_pred cccccccCccchhhhhhhhhccc
Confidence 2 1112232 267777766643
No 16
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=90.12 E-value=0.79 Score=35.13 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
+..+.+..+++.... .+++|.|+|+||..+-.++.+- .-.++|+++-++.....
T Consensus 51 ~~~~~l~~~l~~~~~---~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 51 DYAEDLAELLDALGI---KKVILVGHSMGGMIALRLAARY----------PDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHHHHHHHHTTT---SSEEEEEETHHHHHHHHHHHHS----------GGGEEEEEEESESSSHH
T ss_pred hhhhhhhhccccccc---cccccccccccccccccccccc----------ccccccceeeccccccc
Confidence 334444555554432 6899999999998887777542 12688999999988654
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=89.43 E-value=0.46 Score=37.77 Aligned_cols=39 Identities=15% Similarity=0.119 Sum_probs=28.7
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..++++.|.|+||..+..++...- -.++++++-+++..+
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~----------~~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYP----------ERLLSLVLINAWSRP 117 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHCh----------HHhHHheeecCCCCC
Confidence 457999999999998888876421 136777877776654
No 18
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=89.22 E-value=0.72 Score=36.60 Aligned_cols=45 Identities=24% Similarity=0.223 Sum_probs=37.5
Q ss_pred CCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 24 FLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 24 ~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
+...+++|+|+|=||+.+-.++..+.+... ..++|+++-.|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~~------~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRGL------PKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTTT------CHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhcc------cchhhhhcccccccc
Confidence 556689999999999999999988876531 238999999999887
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=87.92 E-value=0.93 Score=39.37 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
..+.|+.+++.. +...+++...+++|.|+|.||..+-.++.+ . .-.++|+++-+|..
T Consensus 141 ~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~---~-------p~~v~glVLi~p~~ 197 (349)
T PLN02385 141 DLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLK---Q-------PNAWDGAILVAPMC 197 (349)
T ss_pred HHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHh---C-------cchhhheeEecccc
Confidence 345666666654 334445656689999999999866555432 1 12368888887754
No 20
>PHA02857 monoglyceride lipase; Provisional
Probab=87.87 E-value=1.2 Score=36.89 Aligned_cols=55 Identities=11% Similarity=0.245 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+|+.+++....+. +...++++.|+|.||..+..+|.. . .-+++|+++.+|.+++
T Consensus 80 ~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~---~-------p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 80 VRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYK---N-------PNLFTAMILMSPLVNA 134 (276)
T ss_pred HHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHh---C-------ccccceEEEecccccc
Confidence 44555555443333 335689999999999866555532 1 1247999999987764
No 21
>PLN02571 triacylglycerol lipase
Probab=87.21 E-value=2 Score=39.13 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccC----CCCCccccceeEecCCCCChh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDA----GHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~----g~~~~inLkGi~IGNg~td~~ 75 (194)
.+..+++..++++.+.+|.. ..+++|+|+|-||-.+-..|..|....-. .....+.+..+..|.|-+...
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN~ 278 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGDS 278 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccCH
Confidence 56688999999999988876 34799999999999998888888653111 111245677888999888643
No 22
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=86.46 E-value=1.1 Score=34.82 Aligned_cols=38 Identities=18% Similarity=0.361 Sum_probs=27.6
Q ss_pred CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 25 ~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
...+++|.|+|+||..+..+|...- -.++++++-++..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~~~----------~~v~~lil~~~~~ 105 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQYP----------ERVQGLILESGSP 105 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHhCc----------hheeeeEEecCCC
Confidence 3468999999999998887776531 2467777766643
No 23
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=86.19 E-value=1.2 Score=36.30 Aligned_cols=39 Identities=13% Similarity=-0.032 Sum_probs=27.5
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..+++|.|+|+||..+-.+|..- .-.++++++.++..++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLALDG----------PVTPRMVVGINAALMP 132 (278)
T ss_pred CCCceEEEECccHHHHHHHHHhC----------CcccceEEEEcCcccc
Confidence 35789999999998666665431 2246788888876654
No 24
>PLN02753 triacylglycerol lipase
Probab=86.14 E-value=2.4 Score=39.76 Aligned_cols=72 Identities=14% Similarity=0.172 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHccC--CCCCCeEEEccccCceehhHHHHHHHhcc--cCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIVHSD--FLANPLYIAGDSYSGKIVPIVVQEISDGI--DAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe--~~~~~~yI~GESYaG~yvP~la~~I~~~n--~~g~~~~inLkGi~IGNg~td~~ 75 (194)
..+..++...+++...++|. .....++|+|+|-||-..-..|..|.+.. .......+++.-|..|.|-+...
T Consensus 287 ~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~ 362 (531)
T PLN02753 287 FSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNV 362 (531)
T ss_pred hhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCH
Confidence 46788999999999998874 23446999999999999988888887531 11112346677888898888654
No 25
>PLN02719 triacylglycerol lipase
Probab=85.64 E-value=2.4 Score=39.59 Aligned_cols=72 Identities=10% Similarity=0.167 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHccCCC--CCCeEEEccccCceehhHHHHHHHhcc--cCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIVHSDFL--ANPLYIAGDSYSGKIVPIVVQEISDGI--DAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~--~~~~yI~GESYaG~yvP~la~~I~~~n--~~g~~~~inLkGi~IGNg~td~~ 75 (194)
..+..|+...+++..+++|.+. ...++|+|+|-||-..-..|..|.+.. .......+.+.-|..|.|-+...
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~ 348 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNI 348 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCH
Confidence 3567889999999999998652 346999999999999999898887632 11112245567788898888654
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=85.61 E-value=2 Score=36.80 Aligned_cols=58 Identities=21% Similarity=0.383 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
..++|+..|++... ...++...++.|.|+|.||..+-.++.. . | -.++|+++.+++.+
T Consensus 113 ~~~~D~~~~i~~l~-~~~~~~~~~i~l~GhSmGG~ia~~~a~~----~-----p-~~v~~lvl~~~~~~ 170 (330)
T PLN02298 113 LVVEDCLSFFNSVK-QREEFQGLPRFLYGESMGGAICLLIHLA----N-----P-EGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHHHH-hcccCCCCCEEEEEecchhHHHHHHHhc----C-----c-ccceeEEEeccccc
Confidence 45677777776433 3333445689999999999866544431 1 1 24789988888754
No 27
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=84.99 E-value=1.3 Score=35.42 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=30.2
Q ss_pred CeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 28 PLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 28 ~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
|++|+|.|+||..+=.+|+++.+.. ...+.+++-++..
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSPP 104 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCSS
T ss_pred CeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCCC
Confidence 9999999999999999998887753 3456788777543
No 28
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=84.08 E-value=1.5 Score=35.25 Aligned_cols=39 Identities=18% Similarity=0.375 Sum_probs=28.5
Q ss_pred CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 25 ~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
...++++.|+|+||..+..+|..- ...++++++.++...
T Consensus 94 ~~~~~~liG~S~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~~ 132 (288)
T TIGR01250 94 GLDKFYLLGHSWGGMLAQEYALKY----------GQHLKGLIISSMLDS 132 (288)
T ss_pred CCCcEEEEEeehHHHHHHHHHHhC----------ccccceeeEeccccc
Confidence 345699999999999887777531 234678888877653
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=83.83 E-value=1.7 Score=37.57 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
..++|+..+++.....+ ...++++.|+|.||..+-.++.. . .-.++|+++.+|...
T Consensus 112 ~~~~d~~~~~~~~~~~~---~~~~~~l~GhSmGG~ia~~~a~~---~-------p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPG---PYRKRYALAHSMGGAILTLFLQR---H-------PGVFDAIALCAPMFG 167 (330)
T ss_pred HHHHHHHHHHHHHHhcC---CCCCeEEEEEcHHHHHHHHHHHh---C-------CCCcceEEEECchhc
Confidence 34556666665544332 35689999999999766555532 1 123688888888754
No 30
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=83.21 E-value=2.2 Score=38.54 Aligned_cols=53 Identities=11% Similarity=-0.056 Sum_probs=39.9
Q ss_pred HHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 12 HFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 12 ~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..+..|+...|.....++.|.|.|+||.+++.+|..- .-.++++++.+|.++.
T Consensus 250 ~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~----------p~ri~a~V~~~~~~~~ 302 (414)
T PRK05077 250 QAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE----------PPRLKAVACLGPVVHT 302 (414)
T ss_pred HHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC----------CcCceEEEEECCccch
Confidence 4556777788877778899999999999998887531 1246788887777653
No 31
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=82.83 E-value=0.81 Score=43.47 Aligned_cols=60 Identities=13% Similarity=0.069 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhh
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKID 77 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q 77 (194)
..+|+..+++ |+.++|..-...+.|+|.||||-+.-.++. .. . .++..+...|.++....
T Consensus 453 ~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~----~~------~-~f~a~~~~~~~~~~~~~ 512 (620)
T COG1506 453 DLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT----KT------P-RFKAAVAVAGGVDWLLY 512 (620)
T ss_pred cHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh----cC------c-hhheEEeccCcchhhhh
Confidence 4578889999 999999988889999999999964433332 21 2 57778888887776544
No 32
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=82.22 E-value=1.9 Score=38.83 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=44.7
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHH
Q 029400 2 NDTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (194)
Q Consensus 2 ~d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~ 81 (194)
+-+++-.|+..|++.+-.++....+.|+.++|-||||....-+..+- |.+ +.|.+--.+.+....++..|
T Consensus 88 t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~ky---------P~~-~~ga~ASSapv~a~~df~~y 157 (434)
T PF05577_consen 88 TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKY---------PHL-FDGAWASSAPVQAKVDFWEY 157 (434)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH----------TTT--SEEEEET--CCHCCTTTHH
T ss_pred CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhC---------CCe-eEEEEeccceeeeecccHHH
Confidence 34688899999999988777767778999999999997444333321 333 44666666666665554443
Q ss_pred H
Q 029400 82 I 82 (194)
Q Consensus 82 ~ 82 (194)
.
T Consensus 158 ~ 158 (434)
T PF05577_consen 158 F 158 (434)
T ss_dssp H
T ss_pred H
Confidence 3
No 33
>PRK10162 acetyl esterase; Provisional
Probab=82.18 E-value=2.6 Score=36.46 Aligned_cols=45 Identities=16% Similarity=0.024 Sum_probs=34.4
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+++.|+|+|-||+.+-.++....+... +...++|+++..|++|.
T Consensus 153 ~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 153 MSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred hhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 4579999999999999888877654321 12457888998898875
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=81.68 E-value=2.9 Score=37.55 Aligned_cols=59 Identities=20% Similarity=0.227 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..+.|+..+++..-.++| ..+++|+|+|.||..+-.++. ..+ ..-.++|+++.+|+.+.
T Consensus 189 ~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~----~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 189 YVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPS----IEDKLEGIVLTSPALRV 247 (395)
T ss_pred HHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccC----cccccceEEEECccccc
Confidence 446677777776665555 347999999999987654432 111 11357899999988643
No 35
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=80.98 E-value=3.6 Score=33.22 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=32.7
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHH
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~ 81 (194)
...+.|.|-|-||.|+-.+|.+. +++. +|.||.+.|......+
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l~~~ 100 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELLQDY 100 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHHHHh
Confidence 34499999999999988887654 3445 6779999998766543
No 36
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.87 E-value=2.7 Score=35.74 Aligned_cols=55 Identities=11% Similarity=0.147 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
+++++..+|+...+.. .....++++.|+|.||+.+-.++.+.-+ +++.++.-+|.
T Consensus 92 v~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDPa 146 (275)
T cd00707 92 VGAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecCC
Confidence 4556666666554432 2334579999999999988888776522 35566665543
No 37
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=80.70 E-value=3.5 Score=37.42 Aligned_cols=60 Identities=15% Similarity=0.123 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHccCCCC-CCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLA-NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~-~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+|.|....|..-.+.+|.+.. .|+...|.|||| |+..|+.+|. +-.+.|++=-.+|.-|
T Consensus 161 MqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 161 MQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccc
Confidence 4688888888888888999975 799999999988 5666666653 2234555555555555
No 38
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=80.51 E-value=3.1 Score=34.43 Aligned_cols=62 Identities=21% Similarity=0.297 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccc-cceeEecCCCCC
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMN-LKGYMLGNPVTD 73 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~in-LkGi~IGNg~td 73 (194)
+-.|+....+.|++.++ ..|||.|+|+|=|+..+=.|-+.-.+... .+=+ +..|+||-+++.
T Consensus 76 ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e~~~~~p----l~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKEEIAGDP----LRKRLVAAYLIGYPVTV 138 (207)
T ss_pred hHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHHHhcCch----HHhhhheeeecCccccH
Confidence 34677888888888886 67899999999999866555444333221 1111 457777777664
No 39
>PRK14566 triosephosphate isomerase; Provisional
Probab=79.49 E-value=5.2 Score=34.23 Aligned_cols=61 Identities=21% Similarity=0.398 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.|.+++.|+|+++.+.-+...+.+=|. |||-.-|.-+..|... -++.|++||..-.++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ--------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEechHhcCHH
Confidence 46688999999999975422222233333 9999999999999864 3579999999999874
No 40
>PRK14567 triosephosphate isomerase; Provisional
Probab=79.08 E-value=6.1 Score=33.65 Aligned_cols=61 Identities=18% Similarity=0.268 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+.+++.|+++|+.++-+-....+=|. |||-.-|.-+..|.+. -++.|++||.+..++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~--------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL--------PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC--------CCCCEEEeehhhhcHH
Confidence 56788999999999987522222233333 9999999999999864 3578999999999874
No 41
>PLN02324 triacylglycerol lipase
Probab=78.71 E-value=6.7 Score=35.80 Aligned_cols=71 Identities=15% Similarity=0.222 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccC-----CCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDA-----GHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~-----g~~~~inLkGi~IGNg~td~~ 75 (194)
.++-.++..-+++.+.++|... ..+.|+|+|-||-..-..|..|.+.... .....+++.-|..|.|-+...
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN~ 268 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGDH 268 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCCH
Confidence 3567788888999998888542 3699999999999888888888763221 011345677788888877653
No 42
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=78.40 E-value=3.4 Score=32.25 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHH
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~ 47 (194)
..++++.++++.+ ...+++|.|.|+||..+-.+|..
T Consensus 64 ~~~~~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 64 DLADDVLALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 4455555555432 23579999999999977766654
No 43
>PLN02761 lipase class 3 family protein
Probab=78.05 E-value=6.5 Score=36.90 Aligned_cols=71 Identities=7% Similarity=0.111 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHccCC---CCCCeEEEccccCceehhHHHHHHHhcccC---CCCCccccceeEecCCCCChh
Q 029400 5 LSATQIYHFLRKWLIVHSDF---LANPLYIAGDSYSGKIVPIVVQEISDGIDA---GHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~---~~~~~yI~GESYaG~yvP~la~~I~~~n~~---g~~~~inLkGi~IGNg~td~~ 75 (194)
.+..+++..+++....+|.. ..-.++|+|+|-||-..-..|..|.+.+-. .....+++.-|..|.|-+...
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN~ 345 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGNL 345 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCCH
Confidence 57788999999999888643 123499999999999988888888753211 112356677888898887654
No 44
>PLN02578 hydrolase
Probab=77.81 E-value=2.7 Score=36.66 Aligned_cols=50 Identities=18% Similarity=0.228 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
..+.++.+|++... ..+++|.|+|+||..+-.+|.+- .-.++++++.|+.
T Consensus 137 ~~a~~l~~~i~~~~-------~~~~~lvG~S~Gg~ia~~~A~~~----------p~~v~~lvLv~~~ 186 (354)
T PLN02578 137 VWRDQVADFVKEVV-------KEPAVLVGNSLGGFTALSTAVGY----------PELVAGVALLNSA 186 (354)
T ss_pred HHHHHHHHHHHHhc-------cCCeEEEEECHHHHHHHHHHHhC----------hHhcceEEEECCC
Confidence 34556666665432 46899999999998766666542 2246778776653
No 45
>PLN00021 chlorophyllase
Probab=76.90 E-value=4.8 Score=35.07 Aligned_cols=63 Identities=17% Similarity=0.139 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHH-cc---CCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 6 SATQIYHFLRKWLIV-HS---DFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~-fP---e~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
.+.++..++.+-+.. -| +....+++|.|+|.||+.+=.+|....+.. ....+++++.-+++..
T Consensus 101 d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g 167 (313)
T PLN00021 101 DAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeeccccc
Confidence 345555555554332 12 233457999999999987766665432211 1245778777777654
No 46
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=76.87 E-value=5.8 Score=35.73 Aligned_cols=46 Identities=20% Similarity=0.216 Sum_probs=37.4
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~ 76 (194)
..++.+.|||=||+-+=.+.+++.+.++. .-| |+.++..||+++..
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-~~P----k~~iLISPWv~l~~ 239 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKKPNKL-PYP----KSAILISPWVNLVP 239 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhhcCCC-CCC----ceeEEECCCcCCcC
Confidence 45799999999999999999998875542 122 68999999999973
No 47
>PRK10566 esterase; Provisional
Probab=76.43 E-value=4.2 Score=32.93 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=24.4
Q ss_pred HHHHHHHccCCCCCCeEEEccccCceehhHHHH
Q 029400 14 LRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ 46 (194)
Q Consensus 14 L~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~ 46 (194)
+..|+.+.+.....++.|.|.|+||..+-.++.
T Consensus 94 ~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 94 LRAAIREEGWLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred HHHHHHhcCCcCccceeEEeecccHHHHHHHHH
Confidence 345566665555678999999999998776654
No 48
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=76.35 E-value=3.4 Score=38.52 Aligned_cols=59 Identities=15% Similarity=0.084 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
..+.|+..+++ |+.+.|. ...++.+.|.||||...-.+|.. . .-.||+++...+..|..
T Consensus 77 ~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~----~------~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 77 DEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL----Q------PPALRAIAPQEGVWDLY 135 (550)
T ss_pred ccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhcc----C------CCceeEEeecCcccchh
Confidence 34567766666 7777763 34589999999999754444421 1 23578888877777654
No 49
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=74.28 E-value=5.1 Score=32.02 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=25.3
Q ss_pred CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 25 ~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
.-.++++.|.|+||..+-.+|.+.. .-.++++++.++.
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~~~---------~~~v~~lvl~~~~ 101 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQGL---------AGGLCGLIVEGGN 101 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCC---------cccccEEEEeCCC
Confidence 3458999999999976666665421 1126777776654
No 50
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=74.22 E-value=4.4 Score=34.09 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHH
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ 46 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~ 46 (194)
+..+.+.++++.... ..++++.|+|+||..+-.++.
T Consensus 71 ~~~~~l~~~i~~l~~--~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 71 EYNKPLIDFLSSLPE--NEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred HHHHHHHHHHHhcCC--CCCEEEEEECchHHHHHHHHH
Confidence 334455555554322 368999999999996666654
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=72.48 E-value=4.3 Score=31.61 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
-...++.+.+..+.+..+ ..++++.|.|+||..+-.+|..- |. .++++++-++.
T Consensus 25 ~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~---------p~-~v~~lvl~~~~ 78 (230)
T PF00561_consen 25 YTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQY---------PE-RVKKLVLISPP 78 (230)
T ss_dssp HCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHS---------GG-GEEEEEEESES
T ss_pred ccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHC---------ch-hhcCcEEEeee
Confidence 345677788888887665 33499999999998765555432 22 68888888876
No 52
>PRK03204 haloalkane dehalogenase; Provisional
Probab=72.06 E-value=6.4 Score=33.13 Aligned_cols=52 Identities=15% Similarity=0.175 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
.++...+..+++.. ...++++.|+|+||..+=.++. .. .-.+++++++++..
T Consensus 85 ~~~~~~~~~~~~~~---~~~~~~lvG~S~Gg~va~~~a~----~~------p~~v~~lvl~~~~~ 136 (286)
T PRK03204 85 DEHARVIGEFVDHL---GLDRYLSMGQDWGGPISMAVAV----ER------ADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHHHHHHHHHHh---CCCCEEEEEECccHHHHHHHHH----hC------hhheeEEEEECccc
Confidence 34444455444432 3357999999999975433332 11 23578888888764
No 53
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=71.87 E-value=6.7 Score=35.16 Aligned_cols=53 Identities=11% Similarity=0.229 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
...+.+.+..|.+.. ...+++|.|+|+||..+-.+|..- .-.++++++.++..
T Consensus 159 ~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 159 EAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCcc
Confidence 334555666666533 334799999999998665555431 23467877777653
No 54
>PLN00413 triacylglycerol lipase
Probab=71.05 E-value=9.9 Score=35.30 Aligned_cols=61 Identities=16% Similarity=0.234 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCcccc-ceeEecCCCCCh
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNL-KGYMLGNPVTDD 74 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inL-kGi~IGNg~td~ 74 (194)
++..-|++.++++|.+ +++|+|+|-||..+-..|..+....+.. ..-++ +-|..|.|-+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~~~~~~--~~~ri~~VYTFG~PRVGN 330 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIMHDEEE--MLERLEGVYTFGQPRVGD 330 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHhccchh--hccccceEEEeCCCCCcc
Confidence 5667788888888855 6999999999998888877765432211 01112 356777777754
No 55
>PLN02408 phospholipase A1
Probab=70.07 E-value=13 Score=33.41 Aligned_cols=65 Identities=15% Similarity=0.193 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+.+++.+-+++..+++|... ..++|+|+|-||-..-..|..|.+.-.. .+ .+.-|..|.|-+..
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~dl~~~~~~--~~--~V~v~tFGsPRVGN 243 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAYDIKTTFKR--AP--MVTVISFGGPRVGN 243 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHHHHHHhcCC--CC--ceEEEEcCCCCccc
Confidence 456778888888888888652 3599999999999888888888754211 11 35567777777753
No 56
>PLN02429 triosephosphate isomerase
Probab=69.63 E-value=12 Score=32.84 Aligned_cols=61 Identities=20% Similarity=0.335 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+..++.|+++|+.+ +.+-....+-|. |||-.-|.-+..|... .++.|++||.+..++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 46788899999999975 433333345555 9999999999998753 4679999999999764
No 57
>PLN02310 triacylglycerol lipase
Probab=69.34 E-value=12 Score=34.06 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHccCC-CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 5 LSATQIYHFLRKWLIVHSDF-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~-~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+..++..-+++....+++- ....+.|+|+|-||-.+-..|..|.... +.+++.-|..|.|-+..
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRVGN 251 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCccc
Confidence 45567777777777766532 2346999999999998877777775432 34566778888887764
No 58
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=69.03 E-value=10 Score=31.86 Aligned_cols=56 Identities=11% Similarity=0.115 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
...|+..+++.+-+..|.+ .++.+.|.|.||..+-.+|. . .-.++|+++-||++..
T Consensus 81 ~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~-------~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 81 IDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----A-------DLRVAGLVLLNPWVRT 136 (274)
T ss_pred HHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----h-------CCCccEEEEECCccCC
Confidence 4566666766554555544 35999999999965433331 1 1258899999998653
No 59
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=68.46 E-value=8.4 Score=33.79 Aligned_cols=42 Identities=14% Similarity=0.313 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHH
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ 46 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~ 46 (194)
+.++.|+..|+...- ..+++...|.|++|||-||-.+=.++.
T Consensus 107 d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~ 148 (313)
T KOG1455|consen 107 DLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIAL 148 (313)
T ss_pred HHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHh
Confidence 456677777766654 466888999999999999965444443
No 60
>PLN02934 triacylglycerol lipase
Probab=68.30 E-value=15 Score=34.41 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
++..-|++.++++|.+ +++|+|+|-||-..-..|..+....+... ..-.++-|..|.|-+..
T Consensus 306 ~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l~~~~~~-l~~~~~vYTFGsPRVGN 367 (515)
T PLN02934 306 AVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVLQEETEV-MKRLLGVYTFGQPRIGN 367 (515)
T ss_pred HHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHHhccccc-ccCceEEEEeCCCCccC
Confidence 5777888888989876 59999999999988777766654332211 11123456777776653
No 61
>PRK03592 haloalkane dehalogenase; Provisional
Probab=68.11 E-value=8 Score=32.26 Aligned_cols=39 Identities=5% Similarity=0.098 Sum_probs=27.6
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..++++.|.|.||.++-.+|..- .-.++++++.|+...+
T Consensus 92 ~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lil~~~~~~~ 130 (295)
T PRK03592 92 LDDVVLVGHDWGSALGFDWAARH----------PDRVRGIAFMEAIVRP 130 (295)
T ss_pred CCCeEEEEECHHHHHHHHHHHhC----------hhheeEEEEECCCCCC
Confidence 36899999999997666555431 1247888988875443
No 62
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=68.01 E-value=12 Score=31.08 Aligned_cols=73 Identities=14% Similarity=0.150 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHHHHHccCC-CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 029400 3 DTLSATQIYHFLRKWLIVHSDF-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~fPe~-~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~ 76 (194)
|.+.|......|.+|+...-+. ....++|.++|-|+..+-..-+.+....... ...-+|..+++-+|-+|...
T Consensus 68 d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~-~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 68 DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERP-DVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccch-hhHhhhheEEEECCCCCHHH
Confidence 4444555555555555543333 4567999999999998777777766654320 11347899999999998753
No 63
>PLN02802 triacylglycerol lipase
Probab=67.94 E-value=13 Score=34.73 Aligned_cols=66 Identities=12% Similarity=0.200 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+..++..-++++++++|... ..++|+|+|-||-..-..|..|.+.... .+.+..|..|.|-+...
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRVGN~ 374 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRVGNR 374 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCcccH
Confidence 355677788888888776432 3699999999999888888888654321 23456778888877543
No 64
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=67.84 E-value=6.5 Score=32.51 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
++.+.+..|++.. .-.++++.|+|+||..+=.+|.+ . .-.++++++.|+...
T Consensus 76 ~~~~~~~~~i~~l---~~~~~~LvG~S~GG~va~~~a~~----~------p~~v~~lvl~~~~~~ 127 (276)
T TIGR02240 76 GLAKLAARMLDYL---DYGQVNAIGVSWGGALAQQFAHD----Y------PERCKKLILAATAAG 127 (276)
T ss_pred HHHHHHHHHHHHh---CcCceEEEEECHHHHHHHHHHHH----C------HHHhhheEEeccCCc
Confidence 3344444444432 23579999999999866655543 1 124788888887654
No 65
>PLN02965 Probable pheophorbidase
Probab=67.60 E-value=8.7 Score=31.40 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=24.4
Q ss_pred CCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 27 NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 27 ~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
.++++.|+|+||..+-.++... . =.++++++-|+.
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~~~---p-------~~v~~lvl~~~~ 106 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALCKF---T-------DKISMAIYVAAA 106 (255)
T ss_pred CCEEEEecCcchHHHHHHHHhC---c-------hheeEEEEEccc
Confidence 5899999999998777766532 1 134677766654
No 66
>PLN02561 triosephosphate isomerase
Probab=67.56 E-value=21 Score=30.39 Aligned_cols=60 Identities=23% Similarity=0.394 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+.+..++.|+++++.+ +..-..+.+-|. |||-.-|.-+..|... .++.|++||.+..|+
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 179 PAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 46788899999999964 443333445555 9999999999998753 467999999999997
No 67
>PLN02442 S-formylglutathione hydrolase
Probab=67.03 E-value=10 Score=32.14 Aligned_cols=54 Identities=19% Similarity=0.126 Sum_probs=33.5
Q ss_pred HHHHHHHHHc-cCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 12 HFLRKWLIVH-SDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 12 ~FL~~f~~~f-Pe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
+-|..++..+ +.....+++|+|.|+||+-+=.++.+ . + -.+++++..+|..++.
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~----~-----p-~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLK----N-----P-DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHh----C-----c-hhEEEEEEECCccCcc
Confidence 3333444432 34455679999999999755444432 1 1 2367888888988754
No 68
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=66.90 E-value=15 Score=30.79 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=33.2
Q ss_pred HHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 13 FLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 13 FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.|..+... ++ ....+++|+|.|.||..+-.++.. . + -.+++++..+|+.++.
T Consensus 124 ~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~----~-----p-~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 124 ELPALVAAQFP-LDGERQGITGHSMGGHGALVIALK----N-----P-DRFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHh----C-----c-ccceEEEEECCccCcc
Confidence 33344443 33 445679999999999755555543 1 1 1357888888888764
No 69
>PRK00870 haloalkane dehalogenase; Provisional
Probab=66.84 E-value=6.7 Score=32.95 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
+..+.+.++++. ....++.|.|+|+||..+-.+|..- .=.++++++-++.
T Consensus 100 ~~a~~l~~~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~----------p~~v~~lvl~~~~ 149 (302)
T PRK00870 100 RHVEWMRSWFEQ---LDLTDVTLVCQDWGGLIGLRLAAEH----------PDRFARLVVANTG 149 (302)
T ss_pred HHHHHHHHHHHH---cCCCCEEEEEEChHHHHHHHHHHhC----------hhheeEEEEeCCC
Confidence 344455555543 2345799999999998776666431 1236777776653
No 70
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=66.66 E-value=9.3 Score=31.83 Aligned_cols=51 Identities=16% Similarity=0.134 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
++.+-|..|++.. ...+++|.|.|.||..+=.+|..- .-.++++++-|+..
T Consensus 87 ~~a~~l~~~l~~l---~~~~~~lvGhS~Gg~va~~~a~~~----------p~~v~~lili~~~~ 137 (294)
T PLN02824 87 TWGEQLNDFCSDV---VGDPAFVICNSVGGVVGLQAAVDA----------PELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHHHh---cCCCeEEEEeCHHHHHHHHHHHhC----------hhheeEEEEECCCc
Confidence 3334444444433 235799999999998776666432 12468888877654
No 71
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=65.76 E-value=15 Score=33.57 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
|+-++++---++|| ..++|.+|.|+||. .+..++-|.-++ . -=..|++|-|||=
T Consensus 183 Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~---iL~nYLGE~g~~---~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 183 DLREVVNHIKKRYP---QAPLFAVGFSMGGN---ILTNYLGEEGDN---T-PLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHHHHHHhCC---CCceEEEEecchHH---HHHHHhhhccCC---C-CceeEEEEeccch
Confidence 44444444445777 45899999999997 567777765443 2 2357899999986
No 72
>PRK10673 acyl-CoA esterase; Provisional
Probab=65.74 E-value=7.8 Score=31.15 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecC
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGN 69 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGN 69 (194)
.+.++|+.++|..+ .-.+++|.|.|.||..+..+|.+- .-.++++++.+
T Consensus 65 ~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~----------~~~v~~lvli~ 113 (255)
T PRK10673 65 PAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALA----------PDRIDKLVAID 113 (255)
T ss_pred HHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhC----------HhhcceEEEEe
Confidence 34566777776642 334699999999999888777542 12367777755
No 73
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=64.79 E-value=21 Score=30.35 Aligned_cols=60 Identities=15% Similarity=0.226 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhH
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNS 80 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s 80 (194)
++|+..+ .+|++... ..+++|.|.|.||..+-.+|... .-.++++++-+|.++.......
T Consensus 83 ~~Dv~~a-i~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~----------p~~v~~lVL~~P~~~g~~~l~~ 142 (266)
T TIGR03101 83 KEDVAAA-YRWLIEQG---HPPVTLWGLRLGALLALDAANPL----------AAKCNRLVLWQPVVSGKQQLQQ 142 (266)
T ss_pred HHHHHHH-HHHHHhcC---CCCEEEEEECHHHHHHHHHHHhC----------ccccceEEEeccccchHHHHHH
Confidence 3444433 33554432 35899999999998877666431 1246788999999887655443
No 74
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=64.22 E-value=15 Score=31.17 Aligned_cols=46 Identities=20% Similarity=0.127 Sum_probs=37.8
Q ss_pred CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 029400 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (194)
Q Consensus 25 ~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~ 76 (194)
..+++.|+|+|=||+.+-.++....+.. ...+++.++.-|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3567999999999999999999887652 345678888999998876
No 75
>PLN02847 triacylglycerol lipase
Probab=63.57 E-value=15 Score=35.13 Aligned_cols=51 Identities=18% Similarity=0.152 Sum_probs=33.8
Q ss_pred HHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecC
Q 029400 11 YHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGN 69 (194)
Q Consensus 11 ~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGN 69 (194)
...|++-+..||.| .+.|+|+|.||-..-.++..+.+... .-++.-|..|-
T Consensus 238 ~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgP 288 (633)
T PLN02847 238 TPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecC
Confidence 34455556678877 59999999999977777655543221 34456667664
No 76
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=63.37 E-value=13 Score=34.12 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhh----hhH
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKID----QNS 80 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q----~~s 80 (194)
....++.+.++..++.++ .+++.|.|+|-||.++=.++.. ..+.-.+ .| =+=|+||-|+.....- ..+
T Consensus 143 ~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~~---~p~~~~k-~I-~~~I~la~P~~Gs~~~i~~~l~~ 214 (440)
T PLN02733 143 ETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMSL---HSDVFEK-YV-NSWIAIAAPFQGAPGFITDSLLT 214 (440)
T ss_pred HHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHHH---CCHhHHh-Hh-ccEEEECCCCCCCchhHHHHHhc
Confidence 345666677777666543 5689999999999765554432 1111000 11 1224566665544211 111
Q ss_pred HHHHhh---hccccCHHHHHHHHhhchh
Q 029400 81 KIQFAY---LNALITYEIYKSAKKNCKG 105 (194)
Q Consensus 81 ~~~fa~---~~glIsd~~y~~~~~~C~~ 105 (194)
-.++.. +.-+||......+.+.|..
T Consensus 215 g~~~v~~~~~~~~~s~~~~~~~~rs~~s 242 (440)
T PLN02733 215 GVSFVEGWESEFFVSKWSMHQLLIECPS 242 (440)
T ss_pred CchhhhhhhhhhccCHHHHHHHHHhccc
Confidence 122222 2235677777777666643
No 77
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=63.20 E-value=7.1 Score=32.44 Aligned_cols=42 Identities=17% Similarity=0.307 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~ 50 (194)
...+...++|++..+.++. +++|+|+|=||..+-+.|..+.+
T Consensus 66 ~~q~~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 66 PQQKSALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 3445667888888887765 59999999999877777766543
No 78
>PLN03037 lipase class 3 family protein; Provisional
Probab=62.16 E-value=19 Score=33.84 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHccCC-CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 5 LSATQIYHFLRKWLIVHSDF-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~-~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+..++..-+++..+.+++. ....++|+|+|-||-.+-..|..|.+.... ..++.-|..|.|-+...
T Consensus 295 SareQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVGN~ 362 (525)
T PLN03037 295 SASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVGNL 362 (525)
T ss_pred hhHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCccCH
Confidence 34467777788888877753 234699999999999888888777654321 11455677777776543
No 79
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=61.68 E-value=28 Score=29.42 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 3 DTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
-++..++-.+|++++....+ -...++++.|+|=|. .++.+|++... ....+++++.+==|.
T Consensus 61 L~~QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~---~~~~~V~~~~lLfPT 121 (266)
T PF10230_consen 61 LQDQIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP---DLKFRVKKVILLFPT 121 (266)
T ss_pred HHHHHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc---ccCCceeEEEEeCCc
Confidence 35667778899999887664 235679999999986 56677776654 124555555544443
No 80
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=61.53 E-value=13 Score=30.45 Aligned_cols=62 Identities=13% Similarity=0.319 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
+++|.|+-..++.+.++ ...+.|-+.|-|+|.-.+|++..++-..-+ =.++++.+-.+-...
T Consensus 48 ~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~r------~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 48 EQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAALR------ARVAQVVLLSPSTTA 109 (192)
T ss_pred HHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHHH------hheeEEEEeccCCcc
Confidence 57899999999988874 457789999999999999999998865543 345666665554433
No 81
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=61.39 E-value=22 Score=31.26 Aligned_cols=73 Identities=14% Similarity=0.132 Sum_probs=49.2
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhh-hHH
Q 029400 3 DTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQ-NSK 81 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~-~s~ 81 (194)
-+..++|+...++.||.+-| -++.+.|+|-||-..-..|.. + ..-+|-|+.+.+=+=...... +++
T Consensus 126 ~eT~~KD~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~----k-----~lpsl~Gl~viDVVEgtAmeAL~~m 192 (343)
T KOG2564|consen 126 LETMSKDFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAAS----K-----TLPSLAGLVVIDVVEGTAMEALNSM 192 (343)
T ss_pred HHHHHHHHHHHHHHHhccCC----CceEEEeccccchhhhhhhhh----h-----hchhhhceEEEEEechHHHHHHHHH
Confidence 45678999999999996543 259999999999766333321 1 234588888876555554443 566
Q ss_pred HHHhhhc
Q 029400 82 IQFAYLN 88 (194)
Q Consensus 82 ~~fa~~~ 88 (194)
..|+++.
T Consensus 193 ~~fL~~r 199 (343)
T KOG2564|consen 193 QHFLRNR 199 (343)
T ss_pred HHHHhcC
Confidence 6777653
No 82
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=61.35 E-value=14 Score=33.92 Aligned_cols=42 Identities=12% Similarity=0.125 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHH
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~ 47 (194)
.+|.++..||+...... .+.-.+++|.|.|.|||.+=.++.+
T Consensus 98 ~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~ 139 (442)
T TIGR03230 98 LVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSL 139 (442)
T ss_pred HHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHh
Confidence 45666777775443322 3545689999999999977776653
No 83
>PTZ00333 triosephosphate isomerase; Provisional
Probab=61.24 E-value=31 Score=29.37 Aligned_cols=60 Identities=22% Similarity=0.417 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+.+.+++.|+++++.+ +.+.....+-|. |||-.-|.-+..|... .++.|++||.+..++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 46788899999999864 433333344444 9999999999998753 457999999999874
No 84
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=61.22 E-value=8.6 Score=31.47 Aligned_cols=23 Identities=17% Similarity=0.133 Sum_probs=19.0
Q ss_pred CCCCeEEEccccCceehhHHHHH
Q 029400 25 LANPLYIAGDSYSGKIVPIVVQE 47 (194)
Q Consensus 25 ~~~~~yI~GESYaG~yvP~la~~ 47 (194)
...++++.|.|+||..+-.+|.+
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHh
Confidence 44689999999999988777764
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=60.82 E-value=7.7 Score=35.38 Aligned_cols=57 Identities=11% Similarity=-0.006 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..+++-+..|+..-|+.-...+.++|-|+||.|++-+|..= .-.|||++.-.|.++.
T Consensus 242 ~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le----------~~RlkavV~~Ga~vh~ 298 (411)
T PF06500_consen 242 SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE----------DPRLKAVVALGAPVHH 298 (411)
T ss_dssp CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT----------TTT-SEEEEES---SC
T ss_pred HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc----------ccceeeEeeeCchHhh
Confidence 45777888999999999888999999999999999888531 2357786554454443
No 86
>PRK04940 hypothetical protein; Provisional
Probab=59.89 E-value=26 Score=28.30 Aligned_cols=42 Identities=14% Similarity=0.089 Sum_probs=31.0
Q ss_pred CCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHH
Q 029400 27 NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSK 81 (194)
Q Consensus 27 ~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~ 81 (194)
.++.|.|-|-||.|.-.+|.+- .++. +|-||.+.|......+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~------------g~~a-VLiNPAv~P~~~L~~~ 101 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC------------GIRQ-VIFNPNLFPEENMEGK 101 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH------------CCCE-EEECCCCChHHHHHHH
Confidence 4789999999999988888752 3444 4569999997654433
No 87
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=59.30 E-value=12 Score=32.15 Aligned_cols=24 Identities=13% Similarity=0.176 Sum_probs=19.3
Q ss_pred CCCCCeEEEccccCceehhHHHHH
Q 029400 24 FLANPLYIAGDSYSGKIVPIVVQE 47 (194)
Q Consensus 24 ~~~~~~yI~GESYaG~yvP~la~~ 47 (194)
+...+++|.|+|+||..+..+|..
T Consensus 194 ~~~~~~~lvG~S~Gg~~a~~~a~~ 217 (371)
T PRK14875 194 LGIERAHLVGHSMGGAVALRLAAR 217 (371)
T ss_pred cCCccEEEEeechHHHHHHHHHHh
Confidence 334579999999999988877764
No 88
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=58.83 E-value=6.7 Score=32.01 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=29.1
Q ss_pred HHHHHHccCCCCCCeEEEccccCceehhHHHHHHH
Q 029400 15 RKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEIS 49 (194)
Q Consensus 15 ~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~ 49 (194)
.+|++.+|+-..+.+-|.|-|.||-.+-.+|...-
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 46889999999899999999999998888888764
No 89
>PLN02162 triacylglycerol lipase
Probab=57.37 E-value=28 Score=32.35 Aligned_cols=63 Identities=17% Similarity=0.251 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+-|+..+.++|.+ +++|+|+|-||-.+-..|..+.......-... ..+-|..|-|-+...
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~-~~~vYTFGqPRVGn~ 325 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAIHGEDELLDK-LEGIYTFGQPRVGDE 325 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHHccccccccc-cceEEEeCCCCccCH
Confidence 4455667777778865 59999999999977776666654322110001 112367777776543
No 90
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=56.71 E-value=26 Score=30.82 Aligned_cols=61 Identities=15% Similarity=0.305 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
++.+-++.-...+|+ ..++|+|+|=||-++...|..|...... ....++-+--|-|-+...
T Consensus 156 ~~~~~~~~L~~~~~~---~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvGn~ 216 (336)
T KOG4569|consen 156 GLDAELRRLIELYPN---YSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVGNL 216 (336)
T ss_pred HHHHHHHHHHHhcCC---cEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCcccH
Confidence 344445555566774 4699999999999999999999986543 245667777787776543
No 91
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=56.06 E-value=27 Score=29.04 Aligned_cols=60 Identities=18% Similarity=0.284 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
+-++.+...++.+.. ..+++.|+|-|-|...+-...+++.+.... ..=+|.-+++||+.-
T Consensus 31 ~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~---~~~~l~fVl~gnP~r 90 (225)
T PF08237_consen 31 EGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDP---PPDDLSFVLIGNPRR 90 (225)
T ss_pred HHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCC---CcCceEEEEecCCCC
Confidence 344556666665554 678999999999998887777777764322 125788999999844
No 92
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=55.91 E-value=13 Score=31.51 Aligned_cols=38 Identities=13% Similarity=0.115 Sum_probs=25.6
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
..++.+.|+|+||..+-.++.+- .-.++++++-+..+.
T Consensus 94 ~~~~~lvG~S~GG~ia~~~a~~~----------p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 94 IKNWLVFGGSWGSTLALAYAQTH----------PEVVTGLVLRGIFLL 131 (306)
T ss_pred CCCEEEEEECHHHHHHHHHHHHC----------hHhhhhheeeccccC
Confidence 34699999999998666665532 123567777666553
No 93
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=55.16 E-value=7.9 Score=30.03 Aligned_cols=35 Identities=11% Similarity=0.100 Sum_probs=24.0
Q ss_pred CCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 27 NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 27 ~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
.++++.|.|+||..+..+|.+- .-.++++++.++.
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~il~~~~ 99 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAATH----------PDRVRALVTVASS 99 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHHC----------HHhhheeeEecCC
Confidence 5899999999998777666531 1235666665554
No 94
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=55.06 E-value=42 Score=28.75 Aligned_cols=66 Identities=20% Similarity=0.231 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHHHHccC--C-CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccc--cceeEecCCCCChh
Q 029400 5 LSATQIYHFLRKWLIVHSD--F-LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMN--LKGYMLGNPVTDDK 75 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe--~-~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~in--LkGi~IGNg~td~~ 75 (194)
..|..+++.+|.=.+..+. + .+.++.++|.|=||+=. ..|.++.. .- .|.++ |.|.+.|.+..|..
T Consensus 46 ~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~-~Y---ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 46 SEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAP-SY---APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred hHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhH-Hh---CcccccceeEEeccCCccCHH
Confidence 4566666666666555443 2 45789999999999733 33443322 21 26788 99999999988764
No 95
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=54.82 E-value=23 Score=30.32 Aligned_cols=63 Identities=25% Similarity=0.340 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHHHH-c-----cCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 3 DTLSATQIYHFLRKWLIV-H-----SDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~-f-----Pe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
+.+.+.++..+|.+=+.. . |.+. .+.|+|+|=||+-+-.++... .. ....++++++++-+|+=
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s--~l~l~GHSrGGk~Af~~al~~----~~-~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDFS--KLALAGHSRGGKVAFAMALGN----AS-SSLDLRFSALILLDPVD 131 (259)
T ss_pred hHHHHHHHHHHHHhcchhhcccccccccc--ceEEeeeCCCCHHHHHHHhhh----cc-cccccceeEEEEecccc
Confidence 455566666665552221 2 2332 499999999999443333322 11 11256788888877765
No 96
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=54.27 E-value=22 Score=30.54 Aligned_cols=41 Identities=20% Similarity=0.369 Sum_probs=32.1
Q ss_pred CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 25 ~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
...|+||.|+|-||-.+-..+..- .-.++|++|-+|++...
T Consensus 105 ~~~p~~l~gHSmGg~Ia~~~~~~~----------~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 105 PGLPVFLLGHSMGGLIALLYLARY----------PPRIDGLVLSSPALGLG 145 (298)
T ss_pred CCCCeEEEEeCcHHHHHHHHHHhC----------CccccEEEEECccccCC
Confidence 456999999999998666555432 24678999999999877
No 97
>PRK14565 triosephosphate isomerase; Provisional
Probab=54.04 E-value=35 Score=28.73 Aligned_cols=54 Identities=15% Similarity=0.308 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 3 DTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
+.+.+..++.++++|. +.+-|. |||..-|.-+..+.+. -++.|++||.+..++.
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVD 225 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHH
Confidence 4466888899999873 123333 9999999999998762 3579999999999865
No 98
>PRK11071 esterase YqiA; Provisional
Probab=53.82 E-value=15 Score=29.21 Aligned_cols=51 Identities=22% Similarity=0.270 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
+..+++..+.+.. ...+++|.|.|.||.++-.+|... + .+ .++-||..+|.
T Consensus 46 ~~~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~---------~---~~-~vl~~~~~~~~ 96 (190)
T PRK11071 46 DAAELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCF---------M---LP-AVVVNPAVRPF 96 (190)
T ss_pred HHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHc---------C---CC-EEEECCCCCHH
Confidence 3445556666543 345899999999999887777642 1 12 35567777764
No 99
>PLN02511 hydrolase
Probab=53.78 E-value=40 Score=29.94 Aligned_cols=35 Identities=17% Similarity=0.111 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
+.|+.++++..-.++| ..++++.|.|.||..+-.+
T Consensus 156 ~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~y 190 (388)
T PLN02511 156 TGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNY 190 (388)
T ss_pred hHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHH
Confidence 5577677766555565 4589999999999864433
No 100
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=53.50 E-value=43 Score=28.20 Aligned_cols=60 Identities=22% Similarity=0.385 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+.+++.|+++++.+ +.+ ....+-|. |||-.-|.=+..+.+.. ++.|++||.+..++.
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~--------~vDG~LVG~Asl~~~ 235 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP--------DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--------CCCEEEeehHhhCHH
Confidence 35588999999999975 433 33445454 99999998888887542 478999999998753
No 101
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=52.92 E-value=45 Score=28.26 Aligned_cols=60 Identities=20% Similarity=0.313 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+..++.|+++++.+ +. -....+-|. |||-.-|.-+..+... .++.|++||.+..++.
T Consensus 179 ~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 179 PEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 46688899999999974 33 223334444 9999999999998753 4579999999999764
No 102
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=50.96 E-value=18 Score=28.97 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHH
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVV 45 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la 45 (194)
++..++....++++ ....+++|+|.|.||..+-.++
T Consensus 78 ~~~~~i~~~~~~~~-id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 78 SLHQLIDAVKANYS-IDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHhcC-cChhheEEEEECHHHHHHHHHH
Confidence 33444444334432 3445799999999998654444
No 103
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=50.19 E-value=35 Score=30.43 Aligned_cols=54 Identities=20% Similarity=0.262 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
.|+..||..-...+| .++||.+|-|.||. ++|.++.+.-+ .+. .-.++++-+|+
T Consensus 132 ~D~~~~l~~l~~~~~---~r~~~avG~SLGgn---mLa~ylgeeg~---d~~-~~aa~~vs~P~ 185 (345)
T COG0429 132 EDIRFFLDWLKARFP---PRPLYAVGFSLGGN---MLANYLGEEGD---DLP-LDAAVAVSAPF 185 (345)
T ss_pred hHHHHHHHHHHHhCC---CCceEEEEecccHH---HHHHHHHhhcc---Ccc-cceeeeeeCHH
Confidence 444444443333455 67999999999995 56777766543 222 35666666664
No 104
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=49.44 E-value=48 Score=26.93 Aligned_cols=70 Identities=11% Similarity=0.191 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccC--CCCCccccceeE-ecCCCCChh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDA--GHKPRMNLKGYM-LGNPVTDDK 75 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~--g~~~~inLkGi~-IGNg~td~~ 75 (194)
..+..+.+.|.+..+..+.- .+++-+.|+|-||.++=.....+.+.... +.-..+.+..++ ++-|...-.
T Consensus 57 ~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~ 129 (217)
T PF05057_consen 57 VCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSR 129 (217)
T ss_pred HHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCc
Confidence 34666777777777665543 46899999999999887666666655431 111123334433 566666544
No 105
>PRK15492 triosephosphate isomerase; Provisional
Probab=49.04 E-value=53 Score=28.01 Aligned_cols=60 Identities=17% Similarity=0.267 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+.+.+.|+++|+.+ +-+- ...+-|. |||-.-|.-+..|... -++.|++||..-.++.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~--------~diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ--------PHIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC--------CCCCEEEeehhhcCHH
Confidence 35567899999999753 4322 3345555 9999999999999764 3679999999999875
No 106
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=48.36 E-value=8.9 Score=23.52 Aligned_cols=32 Identities=13% Similarity=0.136 Sum_probs=22.9
Q ss_pred CCCChhhhhhHHHHHhhhccccCHHHHHHHHh
Q 029400 70 PVTDDKIDQNSKIQFAYLNALITYEIYKSAKK 101 (194)
Q Consensus 70 g~td~~~q~~s~~~fa~~~glIsd~~y~~~~~ 101 (194)
|.+||..-..--+.=|...|+||.+.+..+.+
T Consensus 12 Giidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 12 GIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp SEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 66777765544456788899999999887754
No 107
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=48.28 E-value=13 Score=25.60 Aligned_cols=15 Identities=13% Similarity=0.518 Sum_probs=12.0
Q ss_pred HHHHHHHHHccCCCC
Q 029400 12 HFLRKWLIVHSDFLA 26 (194)
Q Consensus 12 ~FL~~f~~~fPe~~~ 26 (194)
.|.++||++||+|+.
T Consensus 63 ~y~~~~~~~hpey~d 77 (78)
T PF14542_consen 63 SYVAKYFRRHPEYQD 77 (78)
T ss_dssp HHHHHHHHH-GGGTT
T ss_pred HHHHHHHHhCccccc
Confidence 588999999999864
No 108
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=48.17 E-value=31 Score=30.03 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCce
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGK 39 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~ 39 (194)
.++++.+.+.+.......|+=..-.+|+.|||-|..
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 467888889999999999888666699999998754
No 109
>PRK10349 carboxylesterase BioH; Provisional
Probab=47.54 E-value=18 Score=29.32 Aligned_cols=35 Identities=9% Similarity=0.048 Sum_probs=25.2
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCC
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNP 70 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg 70 (194)
..++++.|+|+||..+-.+|..- .-.++++++-|+
T Consensus 73 ~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lili~~ 107 (256)
T PRK10349 73 PDKAIWLGWSLGGLVASQIALTH----------PERVQALVTVAS 107 (256)
T ss_pred CCCeEEEEECHHHHHHHHHHHhC----------hHhhheEEEecC
Confidence 45799999999998777766531 234677777665
No 110
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=46.57 E-value=20 Score=25.86 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=27.4
Q ss_pred CCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 25 LANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 25 ~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
..++++++|.|.||..+..++..- -.+++++.-+|+.
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~~~-----------~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAARN-----------PRVKAVVLLSPYP 95 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHHHS-----------TTESEEEEESESS
T ss_pred CCCcEEEEEEccCcHHHHHHhhhc-----------cceeEEEEecCcc
Confidence 567899999999999777766621 3467777777753
No 111
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=45.98 E-value=26 Score=30.62 Aligned_cols=51 Identities=25% Similarity=0.315 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPV 71 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~ 71 (194)
..++++..||.+ +...+++|.|+|.||..+-.++.. .. .-.++|+++.|+.
T Consensus 140 ~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~--~~-------P~rV~~LVLi~~~ 190 (360)
T PLN02679 140 TWAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASE--ST-------RDLVRGLVLLNCA 190 (360)
T ss_pred HHHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHh--cC-------hhhcCEEEEECCc
Confidence 344555555542 233589999999999654333321 11 1246788877764
No 112
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=45.05 E-value=22 Score=31.07 Aligned_cols=40 Identities=13% Similarity=0.400 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHh
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~ 50 (194)
.+...-++.++. ++...++++.|.||||...=.+|...-+
T Consensus 112 ~~~v~~i~~~~~---~~~~~~~~lvghS~Gg~va~~~Aa~~P~ 151 (326)
T KOG1454|consen 112 RELVELIRRFVK---EVFVEPVSLVGHSLGGIVALKAAAYYPE 151 (326)
T ss_pred hHHHHHHHHHHH---hhcCcceEEEEeCcHHHHHHHHHHhCcc
Confidence 344455555555 4556789999999999887777776433
No 113
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=44.22 E-value=22 Score=31.34 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISD 50 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~ 50 (194)
.+++.+-.||......+ .+....+||.|+|-|+|.+=.+++++..
T Consensus 129 ~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 129 LVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 45566666666655433 2345679999999999999888888876
No 114
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=43.97 E-value=15 Score=29.81 Aligned_cols=27 Identities=30% Similarity=0.645 Sum_probs=22.2
Q ss_pred CCCCCeEEEccccCceehhHHHHHHHh
Q 029400 24 FLANPLYIAGDSYSGKIVPIVVQEISD 50 (194)
Q Consensus 24 ~~~~~~yI~GESYaG~yvP~la~~I~~ 50 (194)
...-|+.|.|.||||....++|..+..
T Consensus 86 l~~gpLi~GGkSmGGR~aSmvade~~A 112 (213)
T COG3571 86 LAEGPLIIGGKSMGGRVASMVADELQA 112 (213)
T ss_pred ccCCceeeccccccchHHHHHHHhhcC
Confidence 345589999999999999888887743
No 115
>PRK10985 putative hydrolase; Provisional
Probab=41.89 E-value=60 Score=27.80 Aligned_cols=18 Identities=22% Similarity=0.329 Sum_probs=14.3
Q ss_pred CCCeEEEccccCceehhH
Q 029400 26 ANPLYIAGDSYSGKIVPI 43 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~ 43 (194)
..++++.|.|.||..+-.
T Consensus 130 ~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 130 HVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred CCCEEEEEecchHHHHHH
Confidence 457999999999975433
No 116
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=41.86 E-value=45 Score=26.74 Aligned_cols=40 Identities=25% Similarity=0.422 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHc-cCCCCCCeEEEccccCceehhHHHHH
Q 029400 5 LSATQIYHFLRKWLIVH-SDFLANPLYIAGDSYSGKIVPIVVQE 47 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~f-Pe~~~~~~yI~GESYaG~yvP~la~~ 47 (194)
..|.+|..|+...=..+ | .-.+-+.|+|||...+=..++.
T Consensus 89 ~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 45677777877766666 3 2358999999999866555544
No 117
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=41.77 E-value=30 Score=31.80 Aligned_cols=53 Identities=25% Similarity=0.345 Sum_probs=37.2
Q ss_pred hhHHHHHHHhcccCCCCCccccceeEecCC-----CCChhhhhhHHHHHhhhcc--ccCHHHHH
Q 029400 41 VPIVVQEISDGIDAGHKPRMNLKGYMLGNP-----VTDDKIDQNSKIQFAYLNA--LITYEIYK 97 (194)
Q Consensus 41 vP~la~~I~~~n~~g~~~~inLkGi~IGNg-----~td~~~q~~s~~~fa~~~g--lIsd~~y~ 97 (194)
|-++-.+..++.+ ..+++||++|-|| .|=+..+...+..|+-+.. +|+|+.|.
T Consensus 210 v~alE~A~~~A~~----~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 210 VEALEAALNQARK----LGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred HHHHHHHHHHHHH----hCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc
Confidence 4445555555544 3678999999994 3344557788999998765 69998884
No 118
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=41.19 E-value=15 Score=30.93 Aligned_cols=62 Identities=19% Similarity=0.345 Sum_probs=44.2
Q ss_pred hHHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 3 DTLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
+.+.+..++.|+++++.+ +.+-..+.+-|. |||-.-|.-+..+... .++.|++||.+..++.
T Consensus 176 s~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 176 SPEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ--------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS--------TT-SEEEESGGGGSTH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC--------CCCCEEEEchhhhccc
Confidence 346788999999999864 322222334444 8888888888888753 4679999999998875
No 119
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=40.79 E-value=56 Score=31.63 Aligned_cols=61 Identities=16% Similarity=0.262 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+.+++.|+|+|+.+ +-+-....+=|- |||-.-|.-+..|... -++.|++||....++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ--------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEeehHhcCHH
Confidence 46788999999999964 332222223333 9999999999999764 4579999999998875
No 120
>PF05068 MtlR: Mannitol repressor; InterPro: IPR007761 The mannitol operon of Escherichia coli, encoding the mannitol-specific enzyme II of the phosphotransferase system (MtlA) and mannitol phosphate dehydrogenase (MtlD) contains an additional downstream open reading frame which encodes the mannitol repressor (MtlR).; PDB: 3C8G_C 3BRJ_D.
Probab=40.73 E-value=29 Score=27.84 Aligned_cols=27 Identities=19% Similarity=0.250 Sum_probs=21.3
Q ss_pred hhhhhhHHHHHhhhccccCHHHHHHHH
Q 029400 74 DKIDQNSKIQFAYLNALITYEIYKSAK 100 (194)
Q Consensus 74 ~~~q~~s~~~fa~~~glIsd~~y~~~~ 100 (194)
|..+...+...+|+.|+||+..|+.+.
T Consensus 62 PL~~~svRlKL~y~LG~Is~~~y~Die 88 (170)
T PF05068_consen 62 PLGTFSVRLKLLYALGLISKEEYEDIE 88 (170)
T ss_dssp TTSSHHHHHHHHHHTT-S-HHHHHHHH
T ss_pred CchhHHHHHHHHHHcCCCCHHHHhhHH
Confidence 555777889999999999999998765
No 121
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=40.28 E-value=34 Score=33.60 Aligned_cols=82 Identities=17% Similarity=0.065 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHHHHHhh
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSKIQFAY 86 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~~~fa~ 86 (194)
.+|.....+.+.+.+ -.-...+.|+|-||||- ++..++..-. .--+|--+.-+|+||...-...+.+-
T Consensus 589 v~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy----~t~~~l~~~~-----~~~fkcgvavaPVtd~~~yds~~ter-- 656 (755)
T KOG2100|consen 589 VKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGY----LTLKLLESDP-----GDVFKCGVAVAPVTDWLYYDSTYTER-- 656 (755)
T ss_pred hHHHHHHHHHHHhcc-cccHHHeEEeccChHHH----HHHHHhhhCc-----CceEEEEEEecceeeeeeecccccHh--
Confidence 345555555555555 33445699999999994 4555554321 12244446778999887332322221
Q ss_pred hccccCHHH--HHHHH
Q 029400 87 LNALITYEI--YKSAK 100 (194)
Q Consensus 87 ~~glIsd~~--y~~~~ 100 (194)
.||+-+++. |+.+.
T Consensus 657 ymg~p~~~~~~y~e~~ 672 (755)
T KOG2100|consen 657 YMGLPSENDKGYEESS 672 (755)
T ss_pred hcCCCccccchhhhcc
Confidence 267766555 66543
No 122
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=40.22 E-value=35 Score=29.42 Aligned_cols=52 Identities=13% Similarity=0.063 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
..|+++..||... .. .+.+.+.|.|+||..+=.+|.+- .=.++++++.++..
T Consensus 122 ~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~----------P~~V~~LvLi~s~~ 173 (343)
T PRK08775 122 DQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRH----------PARVRTLVVVSGAH 173 (343)
T ss_pred HHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHC----------hHhhheEEEECccc
Confidence 3466666666541 11 23467999999998666666532 22467888887754
No 123
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=39.67 E-value=19 Score=31.29 Aligned_cols=36 Identities=11% Similarity=0.220 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
-+++.+||+++-+.||++.. ++..|.||-|+-++++
T Consensus 9 ~~ei~~~l~~la~~~p~~v~--~~~IG~S~eGR~i~~l 44 (300)
T cd03871 9 WETIEAWTEQVASENPDLIS--RSQIGTTFEGRPIYLL 44 (300)
T ss_pred HHHHHHHHHHHHHHCCCceE--EEEeeeCCCCCeeEEE
Confidence 36788999999999998875 8888999999877655
No 124
>PF07533 BRK: BRK domain; InterPro: IPR006576 BRK is a domain of unknown function found only in the metazoa and in association with CHROMO domain (IPR000953 from INTERPRO) and DEAD/DEAH box helicase domain (IPR011545 from INTERPRO).; GO: 0005515 protein binding, 0016817 hydrolase activity, acting on acid anhydrides; PDB: 2DL6_A 2CKA_A 2V0F_A 2V0E_A 2CKC_A.
Probab=39.50 E-value=18 Score=22.65 Aligned_cols=12 Identities=33% Similarity=0.778 Sum_probs=9.4
Q ss_pred HHHHHHHccCCC
Q 029400 14 LRKWLIVHSDFL 25 (194)
Q Consensus 14 L~~f~~~fPe~~ 25 (194)
|..|++.||.|.
T Consensus 30 L~~WL~~~P~y~ 41 (46)
T PF07533_consen 30 LEEWLEEHPGYE 41 (46)
T ss_dssp HHHHHHH-TTEE
T ss_pred HHHHHHHCcCce
Confidence 789999999884
No 125
>PF08060 NOSIC: NOSIC (NUC001) domain; InterPro: IPR012976 This is the central domain in Nop56/SIK1-like proteins [].; PDB: 3PLA_K 3ICX_B 3ID6_A 3ID5_E 3NVM_A 3NMU_B 2NNW_C 3NVI_A 3NVK_A 2OZB_E ....
Probab=38.95 E-value=29 Score=22.11 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHH-HccCCC
Q 029400 5 LSATQIYHFLRKWLI-VHSDFL 25 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~-~fPe~~ 25 (194)
.....++.+++.|+. .|||+.
T Consensus 14 ~ei~~~~~~lre~Y~~~FPEL~ 35 (53)
T PF08060_consen 14 KEINLLHMRLREWYSWHFPELE 35 (53)
T ss_dssp HHHHHHHHHHHHHHTTTSTTHH
T ss_pred HHHHHHHHHHHHHHHccchhHH
Confidence 345567899999997 599984
No 126
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=37.96 E-value=34 Score=19.31 Aligned_cols=20 Identities=25% Similarity=0.282 Sum_probs=15.8
Q ss_pred HHHhhhccccCHHHHHHHHh
Q 029400 82 IQFAYLNALITYEIYKSAKK 101 (194)
Q Consensus 82 ~~fa~~~glIsd~~y~~~~~ 101 (194)
..-.+..|+||++.|+..++
T Consensus 8 L~~l~~~G~IseeEy~~~k~ 27 (31)
T PF09851_consen 8 LKELYDKGEISEEEYEQKKA 27 (31)
T ss_pred HHHHHHcCCCCHHHHHHHHH
Confidence 34467889999999998765
No 127
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=37.65 E-value=70 Score=26.75 Aligned_cols=61 Identities=20% Similarity=0.406 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHH--ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 029400 4 TLSATQIYHFLRKWLIV--HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~--fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~ 76 (194)
-+.|++++.+|++|+.. -++-.+.-=.|.|-|--|- -++.+.+ +-.+.|+++|....-|.+
T Consensus 177 p~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g~----N~~el~~--------~~diDGFLVGGaSLKpeF 239 (247)
T KOG1643|consen 177 PEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNGG----NCKELAK--------KPDIDGFLVGGASLKPEF 239 (247)
T ss_pred HHHHHHHHHHHHHHHhhcchhhhhhceEEEeccccccc----cHHHhcc--------cccccceEEcCcccChHH
Confidence 46789999999999986 3333322233445554442 2333332 346789999999887764
No 128
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=36.78 E-value=48 Score=30.65 Aligned_cols=61 Identities=20% Similarity=0.215 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHH---HHHhcccCCCCCcccccee
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQ---EISDGIDAGHKPRMNLKGY 65 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~---~I~~~n~~g~~~~inLkGi 65 (194)
+++=.|+.. |..+++...-=+..|+..+|-||||+...-+-. +|..+--++..|.+-+.|+
T Consensus 145 eQALADfA~-ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl~f~d~ 208 (492)
T KOG2183|consen 145 EQALADFAE-LLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVLYFEDT 208 (492)
T ss_pred HHHHHHHHH-HHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceEeecCC
Confidence 344445444 444555544446679999999999965443332 2333333334455555554
No 129
>PRK14905 triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Probab=36.61 E-value=1.1e+02 Score=27.39 Aligned_cols=60 Identities=13% Similarity=0.227 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 4 TLSATQIYHFLRKWLIV-HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~-fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+.+..+++|+++|+.+ +-+- ...+-|. |||-.-|.-+..+... -++.|++||.+..++.
T Consensus 189 ~~~~~~~~~~Ir~~l~~~~~~~-~~~v~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~asl~~~ 249 (355)
T PRK14905 189 AEYADEKHAIIKQCLFELFAEE-SKKIPVL---YGGSVNLENANELIMK--------PHIDGLFIGRSAWDAQ 249 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EeCcCCHHHHHHHhcC--------CCCCEEEechhhccHH
Confidence 46678899999999753 4322 2334444 9999999999998753 4579999999999875
No 130
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=36.61 E-value=33 Score=27.51 Aligned_cols=58 Identities=10% Similarity=0.091 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
+++.+.+++....+.. ...++++++|-|=||...-.++.. . .-.|.|++.-.|+.-..
T Consensus 86 s~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~----~------p~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 86 SAERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALR----Y------PEPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHC----T------SSTSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHH----c------CcCcCEEEEeecccccc
Confidence 3444455555544332 456679999999999766555532 1 22677888888876543
No 131
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=34.71 E-value=41 Score=30.11 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 9 QIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 9 ~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
++.+.|..|.+.. ...+++|.|.|+||.. |..+.... .-.++++++-|+..
T Consensus 182 ~~a~~l~~~i~~l---~~~~~~LvG~s~GG~i----a~~~a~~~------P~~v~~lILi~~~~ 232 (383)
T PLN03084 182 EYVSSLESLIDEL---KSDKVSLVVQGYFSPP----VVKYASAH------PDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHHHHHHHHh---CCCCceEEEECHHHHH----HHHHHHhC------hHhhcEEEEECCCC
Confidence 3334444444332 2347999999999954 33333321 23478888888764
No 132
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=33.38 E-value=35 Score=28.26 Aligned_cols=53 Identities=11% Similarity=0.159 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 10 IYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 10 ~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
+...|.+++..+..--.+++|++|-|=||.+.-.++-.-- =-+.++++-.|..
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~p----------d~faa~a~~sG~~ 132 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYP----------DLFAAVAVVSGVP 132 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCC----------ccceEEEeecccc
Confidence 3444555555555667789999999999987776665421 1355666665543
No 133
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=33.29 E-value=38 Score=24.32 Aligned_cols=28 Identities=25% Similarity=0.553 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccC
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYS 37 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYa 37 (194)
-++|...+.|+-.| |-...|.+-|+||+
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~~ 34 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSNA 34 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchHH
Confidence 46788888888776 55668999999994
No 134
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=33.26 E-value=2e+02 Score=26.62 Aligned_cols=80 Identities=15% Similarity=0.191 Sum_probs=54.7
Q ss_pred HHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHHHHHh---h-
Q 029400 11 YHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSKIQFA---Y- 86 (194)
Q Consensus 11 ~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~~~fa---~- 86 (194)
-..++.|+.+-|+| -|..|-|=||+=.=..||+- .=.+.||+.|.|-++......+..-.. .
T Consensus 103 K~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQry----------P~dfDGIlAgaPA~~~~~~~~~~~~~~~~~~~ 168 (474)
T PF07519_consen 103 KALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRY----------PEDFDGILAGAPAINWTHLQLAHAWPAQVMYP 168 (474)
T ss_pred HHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhC----------hhhcCeEEeCCchHHHHHHHHHhhhhhhhhcc
Confidence 35677888887766 79999999999877777764 346889999999998754432221111 1
Q ss_pred -hccccCHHHHHHHH----hhch
Q 029400 87 -LNALITYEIYKSAK----KNCK 104 (194)
Q Consensus 87 -~~glIsd~~y~~~~----~~C~ 104 (194)
.-+.++....+.+. +.|.
T Consensus 169 ~~~~~~~~~~~~~i~~avl~~CD 191 (474)
T PF07519_consen 169 DPGGYLSPCKLDLIHAAVLAACD 191 (474)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcc
Confidence 13567777765543 5675
No 135
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=32.75 E-value=70 Score=27.63 Aligned_cols=39 Identities=10% Similarity=-0.041 Sum_probs=24.8
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
..++++.|.|.||..+-.++.. .. -.++++++-++.++.
T Consensus 135 ~~~i~lvGhS~GG~i~~~~~~~---~~-------~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 135 LDQISLLGICQGGTFSLCYAAL---YP-------DKIKNLVTMVTPVDF 173 (350)
T ss_pred CCcccEEEECHHHHHHHHHHHh---Cc-------hheeeEEEecccccc
Confidence 4589999999999866554432 11 125666666665553
No 136
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=32.24 E-value=77 Score=29.76 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehh
Q 029400 3 DTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVP 42 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP 42 (194)
-.++=.|+.+|++.-=.+|+.-.++|+..+|-||.|....
T Consensus 148 s~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsA 187 (514)
T KOG2182|consen 148 SLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSA 187 (514)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHH
Confidence 3567778888988777778755556999999999997443
No 137
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=31.50 E-value=1.4e+02 Score=22.52 Aligned_cols=26 Identities=19% Similarity=0.396 Sum_probs=22.0
Q ss_pred CCCeEEEccccCceehhHHHHHHHhc
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDG 51 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~ 51 (194)
..++.+.|+|.||..+-.++..+.+.
T Consensus 63 ~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 63 GRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred CCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 45899999999999888888887654
No 138
>PRK10115 protease 2; Provisional
Probab=31.42 E-value=54 Score=31.72 Aligned_cols=60 Identities=15% Similarity=0.118 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhh
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKID 77 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q 77 (194)
-.|+....+ |+....--....+.|.|-||||..+-.++ .+. | =.+++++.+.|++|....
T Consensus 505 ~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~----~~~-----P-dlf~A~v~~vp~~D~~~~ 564 (686)
T PRK10115 505 FNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLMGVAI----NQR-----P-ELFHGVIAQVPFVDVVTT 564 (686)
T ss_pred HHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHHHHHH----hcC-----h-hheeEEEecCCchhHhhh
Confidence 345555543 55555434556799999999997443332 211 2 248999999999998754
No 139
>PRK11460 putative hydrolase; Provisional
Probab=31.25 E-value=69 Score=26.17 Aligned_cols=23 Identities=17% Similarity=0.028 Sum_probs=17.7
Q ss_pred CCCCCeEEEccccCceehhHHHH
Q 029400 24 FLANPLYIAGDSYSGKIVPIVVQ 46 (194)
Q Consensus 24 ~~~~~~yI~GESYaG~yvP~la~ 46 (194)
....++++.|.|.||..+-.++.
T Consensus 100 ~~~~~i~l~GfS~Gg~~al~~a~ 122 (232)
T PRK11460 100 VGASATALIGFSQGAIMALEAVK 122 (232)
T ss_pred CChhhEEEEEECHHHHHHHHHHH
Confidence 44567999999999987765553
No 140
>PRK01917 cation-binding hemerythrin HHE family protein; Provisional
Probab=31.10 E-value=49 Score=25.12 Aligned_cols=19 Identities=21% Similarity=0.310 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHHHHHHHHc
Q 029400 3 DTLSATQIYHFLRKWLIVH 21 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~f 21 (194)
+...+.++..||..||..|
T Consensus 95 ~~~~~~~l~~~L~~Wl~~H 113 (139)
T PRK01917 95 DFELGRRLVAELPEWFDQH 113 (139)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 4567788999999999877
No 141
>smart00592 BRK domain in transcription and CHROMO domain helicases.
Probab=30.54 E-value=36 Score=21.14 Aligned_cols=14 Identities=21% Similarity=0.546 Sum_probs=11.1
Q ss_pred HHHHHHHHccCCCC
Q 029400 13 FLRKWLIVHSDFLA 26 (194)
Q Consensus 13 FL~~f~~~fPe~~~ 26 (194)
=|..|++.||.|.-
T Consensus 27 ~l~~WL~~~p~yev 40 (45)
T smart00592 27 DLERWLEENPEYEV 40 (45)
T ss_pred HHHHHHhcCCCccc
Confidence 46789999999853
No 142
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=30.19 E-value=60 Score=29.16 Aligned_cols=57 Identities=11% Similarity=0.208 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
.+-..+++-+++|..+.- =...+|.|+|+||-.....|.+ ..+ .++-++|-+||--+
T Consensus 141 ~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlK---yPe-------rV~kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 141 TAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALK---YPE-------RVEKLILVSPWGFP 197 (365)
T ss_pred cchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHh---ChH-------hhceEEEecccccc
Confidence 344578889999998764 2369999999999755444443 322 24556666665543
No 143
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=30.06 E-value=1.3e+02 Score=24.91 Aligned_cols=47 Identities=15% Similarity=0.051 Sum_probs=30.7
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCC-CCCeEEEccccCceehhHHHHHHHhc
Q 029400 2 NDTLSATQIYHFLRKWLIVHSDFL-ANPLYIAGDSYSGKIVPIVVQEISDG 51 (194)
Q Consensus 2 ~d~~~a~~~~~FL~~f~~~fPe~~-~~~~yI~GESYaG~yvP~la~~I~~~ 51 (194)
+|..+++-+...+...+..-++-. ..++--+| ||||+|.+...+++.
T Consensus 105 ~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 105 NDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp T-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred CChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 467788888888888887655432 13455555 699999999998875
No 144
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=29.85 E-value=55 Score=29.66 Aligned_cols=33 Identities=15% Similarity=0.250 Sum_probs=20.4
Q ss_pred HHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 11 YHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 11 ~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
++++++-...|. -..+++.|+|+|.||+.+-.+
T Consensus 161 l~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~ 193 (493)
T cd00312 161 LKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLL 193 (493)
T ss_pred HHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhH
Confidence 344444433333 245679999999999855433
No 145
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=28.82 E-value=72 Score=27.11 Aligned_cols=29 Identities=17% Similarity=0.301 Sum_probs=24.6
Q ss_pred CCCCCCeEEEccccCceehhHHHHHHHhc
Q 029400 23 DFLANPLYIAGDSYSGKIVPIVVQEISDG 51 (194)
Q Consensus 23 e~~~~~~yI~GESYaG~yvP~la~~I~~~ 51 (194)
-+...||-++|+|+||+..=.+|+++.+.
T Consensus 70 ~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 70 PLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred ccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 46678999999999999888888888654
No 146
>PRK11001 mtlR mannitol repressor protein; Provisional
Probab=28.77 E-value=63 Score=25.95 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=25.7
Q ss_pred eeEecCCCCChhhhhhHHHHHhhhccccCHHHHHHHH
Q 029400 64 GYMLGNPVTDDKIDQNSKIQFAYLNALITYEIYKSAK 100 (194)
Q Consensus 64 Gi~IGNg~td~~~q~~s~~~fa~~~glIsd~~y~~~~ 100 (194)
.++-|+| |..+...+...++++|+||.+.|+.+.
T Consensus 53 PLL~~~G---PLg~lsVRLKLlygLGvIs~~~Y~Die 86 (171)
T PRK11001 53 PLLDGDG---PLGDLSVRLKLLYGLGVISREEYEDIE 86 (171)
T ss_pred HHhcCCC---CchhHHHHHHHHHHccCCCHHHHHhHH
Confidence 3444555 444666788999999999999998765
No 147
>PRK05855 short chain dehydrogenase; Validated
Probab=28.15 E-value=66 Score=29.26 Aligned_cols=31 Identities=6% Similarity=0.044 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCcee
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKI 40 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~y 40 (194)
...+.|+..+++..- ...|++|.|+|+||..
T Consensus 77 ~~~a~dl~~~i~~l~------~~~~~~lvGhS~Gg~~ 107 (582)
T PRK05855 77 ARLADDFAAVIDAVS------PDRPVHLLAHDWGSIQ 107 (582)
T ss_pred HHHHHHHHHHHHHhC------CCCcEEEEecChHHHH
Confidence 456667777776421 1346999999999943
No 148
>PF11943 DUF3460: Protein of unknown function (DUF3460); InterPro: IPR021853 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 70 amino acids in length. This protein has a conserved WDK sequence motif.
Probab=27.97 E-value=55 Score=21.75 Aligned_cols=18 Identities=22% Similarity=0.414 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHccCCC
Q 029400 8 TQIYHFLRKWLIVHSDFL 25 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~ 25 (194)
.++-.||.++..+||+..
T Consensus 5 Se~TqFl~~lk~~~Pele 22 (60)
T PF11943_consen 5 SEITQFLNQLKAKHPELE 22 (60)
T ss_pred CHHHHHHHHHHHhCCchH
Confidence 356789999999999884
No 149
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=27.58 E-value=1.5e+02 Score=29.19 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=28.0
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
+-.+-++|.||+|...-.+|..- .-.||.++-..|+.+..
T Consensus 337 nGkVGm~G~SY~G~~~~~aAa~~----------pp~LkAIVp~a~is~~y 376 (767)
T PRK05371 337 NGKVAMTGKSYLGTLPNAVATTG----------VEGLETIIPEAAISSWY 376 (767)
T ss_pred CCeeEEEEEcHHHHHHHHHHhhC----------CCcceEEEeeCCCCcHH
Confidence 45799999999997665554321 23578888877777643
No 150
>smart00631 Zn_pept Zn_pept.
Probab=27.33 E-value=36 Score=28.88 Aligned_cols=36 Identities=19% Similarity=0.288 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
-.++.++|+++-+.||.+. .+...|.|+.|.-++++
T Consensus 4 y~e~~~~l~~l~~~~~~~v--~~~~iG~S~~Gr~i~~~ 39 (277)
T smart00631 4 YEEIEAWLKELAARYPDLV--RLVSIGKSVEGRPIWVL 39 (277)
T ss_pred HHHHHHHHHHHHHHCCCce--EEEeceecCCCCceEEE
Confidence 3678899999989999876 48889999999877654
No 151
>COG4425 Predicted membrane protein [Function unknown]
Probab=27.16 E-value=94 Score=29.13 Aligned_cols=36 Identities=14% Similarity=0.212 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCce
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGK 39 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~ 39 (194)
.++|+.+.+..-+....-|+=..-++|+.|||-|-.
T Consensus 374 ~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 374 ADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 367888889999999999988777799999998754
No 152
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=27.03 E-value=47 Score=21.81 Aligned_cols=23 Identities=4% Similarity=0.209 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHccCCCC
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLA 26 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~ 26 (194)
.++-+++++.|++|+..||.+-.
T Consensus 4 aeiPe~L~~~m~~fie~hP~WDQ 26 (57)
T PF10929_consen 4 AEIPEDLHQAMKDFIETHPNWDQ 26 (57)
T ss_pred ccccHHHHHHHHHHHHcCCCchH
Confidence 34567899999999999998854
No 153
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=26.91 E-value=95 Score=25.50 Aligned_cols=63 Identities=16% Similarity=0.156 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHc--cCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccce-eEecCCCCChhh
Q 029400 7 ATQIYHFLRKWLIVH--SDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKG-YMLGNPVTDDKI 76 (194)
Q Consensus 7 a~~~~~FL~~f~~~f--Pe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkG-i~IGNg~td~~~ 76 (194)
++.+.+.++..++.+ ..-..+++.|.|+|-||. +|+..+...... .-++++ +.+|.|...+..
T Consensus 63 ~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl----var~~l~~~~~~---~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 63 AEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGL----VARSALSLPNYD---PDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhH----HHHHHHhccccc---cccEEEEEEEcCCCCCccc
Confidence 444555555555544 223567899999999996 333333222110 112333 457778776654
No 154
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=26.80 E-value=81 Score=27.76 Aligned_cols=53 Identities=8% Similarity=-0.049 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHccCCCCCC-eEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 7 ATQIYHFLRKWLIVHSDFLANP-LYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~-~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
..++...+..+++.. .-.+ ++|.|.|.||..+-.+|..- .-.++++++.|+..
T Consensus 129 ~~~~~~~~~~~l~~l---~~~~~~~lvG~S~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~ 182 (379)
T PRK00175 129 IRDWVRAQARLLDAL---GITRLAAVVGGSMGGMQALEWAIDY----------PDRVRSALVIASSA 182 (379)
T ss_pred HHHHHHHHHHHHHHh---CCCCceEEEEECHHHHHHHHHHHhC----------hHhhhEEEEECCCc
Confidence 345555566666543 2345 58999999997666666542 23467888877654
No 155
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=26.72 E-value=43 Score=26.65 Aligned_cols=34 Identities=12% Similarity=0.259 Sum_probs=25.8
Q ss_pred HHHHHHHHHccCCCCCCeEEEccccCceehhHHH
Q 029400 12 HFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVV 45 (194)
Q Consensus 12 ~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la 45 (194)
.....|++..|+....++-+.|-|+||+++=.+|
T Consensus 83 ~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 83 QAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 3445677788877777899999999998665444
No 156
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=26.50 E-value=53 Score=29.51 Aligned_cols=65 Identities=26% Similarity=0.390 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcc--cCCCCCccccceeEecCCCCChhh
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI--DAGHKPRMNLKGYMLGNPVTDDKI 76 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n--~~g~~~~inLkGi~IGNg~td~~~ 76 (194)
.++..||+.+-..||...+ ++..|.||-|+=++++ .|.+.. ....+|.+-+.|=+=||=|+.+..
T Consensus 10 ~ei~~~l~~l~~~~P~i~~--l~~IG~S~eGR~I~~l--~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~ 76 (375)
T cd03863 10 SDMEIFLRRYANEYPSITR--LYSVGKSVELRELYVM--EISDNPGIHEPGEPEFKYIGNMHGNEVVGREL 76 (375)
T ss_pred HHHHHHHHHHHHHCCCcEE--EEEcccCCccceEEEE--EEecCCCcccCCCCeEEEEccccCCcHHHHHH
Confidence 5788999999899998764 8989999999966554 343311 112356666666666777766643
No 157
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=26.33 E-value=49 Score=28.18 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=25.3
Q ss_pred HHccCCCCCCeEEEccccCceehhHHHHHHHhcc
Q 029400 19 IVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI 52 (194)
Q Consensus 19 ~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n 52 (194)
+..|+- |.++.|-|+||..+=.+|+++..+-
T Consensus 60 ~~QP~G---Py~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 60 RVQPEG---PYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred HhCCCC---CEEEEeeccccHHHHHHHHHHHhCC
Confidence 467755 8999999999998888888887653
No 158
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=25.72 E-value=44 Score=27.85 Aligned_cols=59 Identities=17% Similarity=0.098 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhh
Q 029400 6 SATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKI 76 (194)
Q Consensus 6 ~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~ 76 (194)
.+.|.++. .+|+...|-- +-.+-++|-||+|...-.+|.. ..-.||.++..-++.|...
T Consensus 82 e~~D~~d~-I~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~----------~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 82 EAQDGYDT-IEWIAAQPWS-NGKVGMYGISYGGFTQWAAAAR----------RPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp HHHHHHHH-HHHHHHCTTE-EEEEEEEEETHHHHHHHHHHTT----------T-TTEEEEEEESE-SBTCC
T ss_pred HHHHHHHH-HHHHHhCCCC-CCeEEeeccCHHHHHHHHHHhc----------CCCCceEEEecccCCcccc
Confidence 34444433 3466666544 3369999999999877766651 2456899998888777654
No 159
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=25.70 E-value=40 Score=28.84 Aligned_cols=79 Identities=18% Similarity=0.180 Sum_probs=46.9
Q ss_pred CCCeEEEccccCceehhHHHHHHHhcccC---CC--------CCccccceeEecCCCCChhhhhhHHH-HHhhhcc-ccC
Q 029400 26 ANPLYIAGDSYSGKIVPIVVQEISDGIDA---GH--------KPRMNLKGYMLGNPVTDDKIDQNSKI-QFAYLNA-LIT 92 (194)
Q Consensus 26 ~~~~yI~GESYaG~yvP~la~~I~~~n~~---g~--------~~~inLkGi~IGNg~td~~~q~~s~~-~fa~~~g-lIs 92 (194)
..|.|..|+||||+-.=.+++.= +.+.. |. ...-.|+.++++|-..-+..-...+. .-+.++| -++
T Consensus 104 ~~P~y~vgHS~GGqa~gL~~~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p 182 (281)
T COG4757 104 GHPLYFVGHSFGGQALGLLGQHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLP 182 (281)
T ss_pred CCceEEeeccccceeecccccCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCc
Confidence 56899999999999876665543 11111 11 11245677777776665554443322 2223455 466
Q ss_pred HHHHHHHHhhchh
Q 029400 93 YEIYKSAKKNCKG 105 (194)
Q Consensus 93 d~~y~~~~~~C~~ 105 (194)
-..+....+=|.-
T Consensus 183 ~~v~RdW~RwcR~ 195 (281)
T COG4757 183 GTVMRDWARWCRH 195 (281)
T ss_pred chHHHHHHHHhcC
Confidence 6778888888865
No 160
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=25.68 E-value=69 Score=27.66 Aligned_cols=53 Identities=8% Similarity=-0.070 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHccCCCCCC-eEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCC
Q 029400 7 ATQIYHFLRKWLIVHSDFLANP-LYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVT 72 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~-~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~t 72 (194)
..++.+.+..+++.. .-.+ +.|.|.|.||..+-.+|..- .-.++++++.++..
T Consensus 109 ~~~~~~~~~~~~~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 109 IRDDVKAQKLLLDHL---GIEQIAAVVGGSMGGMQALEWAIDY----------PERVRAIVVLATSA 162 (351)
T ss_pred HHHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHC----------hHhhheEEEEccCC
Confidence 345555555555433 2234 99999999997666665431 23467777777654
No 161
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=24.68 E-value=46 Score=28.58 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
-+++.++|+++-+.||.+. .++..|.|+-|+-++.+
T Consensus 7 y~ei~~~l~~l~~~~p~~v--~~~~iG~S~eGR~i~~l 42 (295)
T cd03859 7 YLEMVDELNAAAAAYPNLT--KVKSIGKSYEGRDIIAV 42 (295)
T ss_pred HHHHHHHHHHHHHHCCCce--EEEeeeecCCCCeEEEE
Confidence 3678899999999999865 48889999999855443
No 162
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=24.36 E-value=1.1e+02 Score=25.94 Aligned_cols=78 Identities=18% Similarity=0.064 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChhhhhhHHHH
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDKIDQNSKIQ 83 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~~q~~s~~~ 83 (194)
+++..|+..+++--|+.+|--+ .+-++|+|-|.|.+..+..++- ...+.|.++-.|+-+-. ..+-.+
T Consensus 115 ~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r---------~prI~gl~l~~GvY~l~--EL~~te 181 (270)
T KOG4627|consen 115 EQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQR---------SPRIWGLILLCGVYDLR--ELSNTE 181 (270)
T ss_pred HHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhc---------CchHHHHHHHhhHhhHH--HHhCCc
Confidence 5677788888887777777443 3999999999885544444421 23356666666665432 222334
Q ss_pred HhhhccccCHH
Q 029400 84 FAYLNALITYE 94 (194)
Q Consensus 84 fa~~~glIsd~ 94 (194)
+.+..||-+++
T Consensus 182 ~g~dlgLt~~~ 192 (270)
T KOG4627|consen 182 SGNDLGLTERN 192 (270)
T ss_pred cccccCcccch
Confidence 44556665443
No 163
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=24.20 E-value=93 Score=27.43 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCc
Q 029400 4 TLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSG 38 (194)
Q Consensus 4 ~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG 38 (194)
+..|.|+..|+...-. .+...+..|.|+|-||
T Consensus 103 ~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 4567777777776543 2567789999999999
No 164
>PRK13604 luxD acyl transferase; Provisional
Probab=24.16 E-value=1e+02 Score=27.02 Aligned_cols=37 Identities=22% Similarity=0.222 Sum_probs=26.0
Q ss_pred CCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 27 NPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 27 ~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.++.|.|+|-||..+...|. ..+++++++..|+.+-.
T Consensus 108 ~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~sp~~~l~ 144 (307)
T PRK13604 108 NNLGLIAASLSARIAYEVIN------------EIDLSFLITAVGVVNLR 144 (307)
T ss_pred CceEEEEECHHHHHHHHHhc------------CCCCCEEEEcCCcccHH
Confidence 47999999999976433321 12377888888888843
No 165
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=24.06 E-value=47 Score=29.71 Aligned_cols=36 Identities=19% Similarity=0.359 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
-.++.++|+.+-..||++.. ++..|.||-|+=++++
T Consensus 7 y~ei~~~L~~La~~~P~lv~--l~~IG~S~EGR~I~~l 42 (360)
T cd06905 7 YDELTAALQAWASAYPQLCS--LESIGKSYEGRDIWLL 42 (360)
T ss_pred HHHHHHHHHHHHHHCCCceE--EEEeeecCCCCceEEE
Confidence 46889999999999998764 8888999999855443
No 166
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=24.04 E-value=48 Score=29.39 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
+++.++|+++-..||... .+...|.|+-|+-++.+
T Consensus 5 ~ei~~~l~~l~~~~p~~~--~~~~iG~S~eGR~i~~l 39 (374)
T cd03858 5 AELESFLKEVAANYPNIT--RLYSIGKSVQGRDLWVL 39 (374)
T ss_pred HHHHHHHHHHHHhCCCce--EEEEcccCCCCCEEEEE
Confidence 578899999999999865 48899999999876654
No 167
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.99 E-value=91 Score=31.19 Aligned_cols=36 Identities=11% Similarity=0.228 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHH---HHccCCC---CCCeEEEccccCcee
Q 029400 5 LSATQIYHFLRKWL---IVHSDFL---ANPLYIAGDSYSGKI 40 (194)
Q Consensus 5 ~~a~~~~~FL~~f~---~~fPe~~---~~~~yI~GESYaG~y 40 (194)
+.++.+.+.++.-+ +.-+||. ...+.|.|+|+||..
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiV 195 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIV 195 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHH
Confidence 34455555555444 4446676 555999999999974
No 168
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.80 E-value=1.4e+02 Score=24.74 Aligned_cols=42 Identities=10% Similarity=0.086 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHH
Q 029400 5 LSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQE 47 (194)
Q Consensus 5 ~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~ 47 (194)
+...|+. .-..|+...|+-....+.+.|-|+||+.+=..+..
T Consensus 91 ~~~~d~~-a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~ 132 (236)
T COG0412 91 EVLADID-AALDYLARQPQVDPKRIGVVGFCMGGGLALLAATR 132 (236)
T ss_pred HHHHHHH-HHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcc
Confidence 3444443 34457778887777789999999999976665554
No 169
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=23.43 E-value=52 Score=28.18 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHH
Q 029400 8 TQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIV 44 (194)
Q Consensus 8 ~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~l 44 (194)
+++.++|+.+-+.+|++.+ +...|.|+-|.-++.+
T Consensus 5 ~ei~~~l~~l~~~~p~~~~--~~~iG~S~egr~i~~l 39 (294)
T cd03860 5 DEIYAWLDELAQKYPDLVT--VETIGRSYEGRPIKGV 39 (294)
T ss_pred HHHHHHHHHHHHHCCCceE--EEeeeeCCCCCeEEEE
Confidence 5788999999889997754 8889999999866643
No 170
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=23.36 E-value=1.7e+02 Score=25.17 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcc
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGI 52 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n 52 (194)
+.++...|+-|...++.-.-..+||+| ||..+|-|...+.+.-
T Consensus 264 ~~eI~~~l~~~~~~~~~~~i~~I~LtG---gga~~~gl~~~l~~~l 306 (348)
T TIGR01175 264 VDEIRRSLQFFTAQSGTNSLDGLVLAG---GGATLSGLDAAIYQRL 306 (348)
T ss_pred HHHHHHHHHhhcCCCCCcccceEEEEC---ccccchhHHHHHHHHH
Confidence 344444454444444443445699999 7788888988887654
No 171
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=22.76 E-value=49 Score=28.68 Aligned_cols=65 Identities=18% Similarity=0.272 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhccc-CCCCCccccceeEecCCCCChh
Q 029400 7 ATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGID-AGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 7 a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~-~g~~~~inLkGi~IGNg~td~~ 75 (194)
-+++.+||+.+-+.+|++.+ +...|.|+-|+-++++. |.+... ...++.+=+.|=+=|+=|+.+.
T Consensus 7 ~~ei~~~l~~la~~~p~~v~--~~~iG~S~eGR~i~~l~--I~~~~~~~~~k~~v~i~~giHarE~~~~~ 72 (304)
T cd06248 7 LEDHLQWLRDLQAAFPNNSE--LFTIGKSYEGRTILGLH--IWGSGGEKGSKPAIVIHGTVHAREWISTM 72 (304)
T ss_pred HHHHHHHHHHHHHHCCCceE--EeceEECCCCCeEEEEE--EecCCCCCCCCcEEEEECCcCcCccccHH
Confidence 35788999999899998764 78889999998666543 332211 1223444444444455555554
No 172
>PRK03995 hypothetical protein; Provisional
Probab=22.04 E-value=1.8e+02 Score=24.98 Aligned_cols=46 Identities=11% Similarity=0.014 Sum_probs=27.3
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhc
Q 029400 3 DTLSATQIYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDG 51 (194)
Q Consensus 3 d~~~a~~~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~ 51 (194)
|..+++-+.+.+...+..-+.-...++--+| ||||.|-+...+++.
T Consensus 158 d~~a~~~vA~avl~~l~~~~~~~~~~~iGiG---GgHYapr~T~~~l~~ 203 (267)
T PRK03995 158 NERAGEILAEAVIEVLDSIEYEKFKPAIGIG---GGHYAPKFTKLALES 203 (267)
T ss_pred CcHHHHHHHHHHHHHHhcccccCCCEEEEEC---CCCccHHHHHHHhhC
Confidence 4556666666666666421111222344445 689999999888764
No 173
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=21.58 E-value=56 Score=29.25 Aligned_cols=37 Identities=22% Similarity=0.275 Sum_probs=20.8
Q ss_pred CeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCChh
Q 029400 28 PLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDDK 75 (194)
Q Consensus 28 ~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~~ 75 (194)
.+-++|+||||--+- +.+.+. ..++..++-+||.-|.
T Consensus 229 ~i~~~GHSFGGATa~---~~l~~d--------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATAL---QALRQD--------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHH---HHHHH---------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHH---HHHhhc--------cCcceEEEeCCcccCC
Confidence 488999999996443 333222 3456777888888765
No 174
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=21.41 E-value=1.5e+02 Score=22.20 Aligned_cols=50 Identities=18% Similarity=0.215 Sum_probs=28.6
Q ss_pred HHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 11 YHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 11 ~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
...+..|+... ...++.+.|.|+||..+-.++..--+ .++++++-++...
T Consensus 75 ~~~~~~~~~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 75 ADDLAALLDAL---GLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHHHh---CCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 34445555432 23349999999998765555544322 4556655554443
No 175
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=21.08 E-value=2.2e+02 Score=24.05 Aligned_cols=49 Identities=14% Similarity=0.230 Sum_probs=25.4
Q ss_pred ccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCC
Q 029400 21 HSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTD 73 (194)
Q Consensus 21 fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td 73 (194)
.-+|.=+.+.+.|+|.||.- +..++.+.-....-|+++ |=+.||.|+=+
T Consensus 97 ~~~Y~~~~~N~VGHSmGg~~---~~~yl~~~~~~~~~P~l~-K~V~Ia~pfng 145 (255)
T PF06028_consen 97 KKKYHFKKFNLVGHSMGGLS---WTYYLENYGNDKNLPKLN-KLVTIAGPFNG 145 (255)
T ss_dssp HHCC--SEEEEEEETHHHHH---HHHHHHHCTTGTTS-EEE-EEEEES--TTT
T ss_pred HHhcCCCEEeEEEECccHHH---HHHHHHHhccCCCCcccc-eEEEeccccCc
Confidence 34566667999999999974 345555533222222221 44566655443
No 176
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=20.33 E-value=89 Score=27.91 Aligned_cols=62 Identities=10% Similarity=0.120 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHccCCCCCCeEEEccccCceehhHHHHHHHhcccCCCCCccccceeEecCCCCCh
Q 029400 10 IYHFLRKWLIVHSDFLANPLYIAGDSYSGKIVPIVVQEISDGIDAGHKPRMNLKGYMLGNPVTDD 74 (194)
Q Consensus 10 ~~~FL~~f~~~fPe~~~~~~yI~GESYaG~yvP~la~~I~~~n~~g~~~~inLkGi~IGNg~td~ 74 (194)
...-|++..+.-=+-..+++.|.|+|.||.++=.+-+...+.. =....|. +=|.||-|+...
T Consensus 102 ~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~--W~~~~i~-~~i~i~~p~~Gs 163 (389)
T PF02450_consen 102 YFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEE--WKDKYIK-RFISIGTPFGGS 163 (389)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchh--hHHhhhh-EEEEeCCCCCCC
Confidence 3344444443311222679999999999987665555543221 0011333 455667666654
Done!